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Q9UM73_ALK | ALK tyrosine kinase receptor   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • signal-peptide
  • transmembrane
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q9UM73 52 KSLAVDFVVPSLFRVY HHHHHHCHHHHHHHHH c1aR-5 DISO 0.0 NA cosmic_phi_to_LIVMF
2 low complexity Q9UM73 55 AVDFVVPSLFRVYA HHHCHHHHHHHHHH c3-4 DISO 0.0 Weak: -30.912 cosmic_phi_to_LIVMF
3 nes_diso Q9UM73 159 GEAAVGLLQFNLSE CCCHHHEEEEEHHH c2-4 boundary 0.57 Bad: -26.101
4 nes_beta_diso Q9UM73 162 AVGLLQFNLSELFS HHHEEEEEHHHHHH c3-4 boundary 0.71 Bad: -29.477
5 nes_beta_diso Q9UM73 410 GNRSLSAVDFFALKN CCCCEEEEEEEEEEC c1b-4 boundary boundary|MAM; 1.0 NA cosmic_phi_to_LIVMF
6 nes_diso Q9UM73 474 LPVGFYCNFEDGFCGWT CCCCCEEECCCCCCCEE c1cR-4 boundary boundary|MAM; 0.38 Bad: -28.326 cosmic_spacer
7 nes_diso Q9UM73 552 MSWLIRGVLRGNVSLVL EEEEECCCCCCEEEEEE c1c-4 boundary middle|MAM; 0.25 Bad: -20.95 cosmic_phi_to_LIVMF
8 nes_diso Q9UM73 556 IRGVLRGNVSLVLVEN ECCCCCCEEEEEEEEC c1a-4 boundary middle|MAM; 0.57 NA cosmic_spacer
9 nes_diso Q9UM73 619 SRAIVAFDNISISL CCEEEEECCCCCCC c2-4 boundary boundary|MAM; 0.57 NA cosmic_phi_to_LIVMF
10 nes_diso Q9UM73 621 AIVAFDNISISLDCYL EEEEECCCCCCCHHHH c1aR-4 boundary boundary|MAM; 0.14 Weak: -32.274 cosmic_spacer Weak|
11 nes_diso Q9UM73 624 AFDNISISLDCYLTISG EECCCCCCCHHHHHCCC c1c-5 boundary boundary|MAM; 0.0 Medium: -34.85 cosmic_spacer Medium|
12 nes_beta_diso Q9UM73 753 RSHGVSVLGIFNLEK CCCCEEEEEEEEECC c1b-4 boundary 1.0 NA cosmic_phi_to_LIVMF
13 nes_diso Q9UM73 782 ACPSTNQLIQKVCIGE CCCCCCHHHHHHHCCC c1a-AT-4 boundary 0.0 NA cosmic_spacer
14 low complexity Q9UM73 826 YVFKMKDGVPVPLIIAA EEEECCCCCEECEEEEE c1cR-4 boundary 0.25 Bad: -22.949 cosmic_phi
15 nes_TM Q9UM73 1033 LSLILSVVTSALVAAL HHHHHHHHHHHHHHHH c1aR-4 __ 0.0 Weak: -32.793 cosmic_spacer
16 nes_TM Q9UM73 1036 ILSVVTSALVAALVLAF HHHHHHHHHHHHHHHHH c1c-5 boundary 0.0 Bad: -26.572 cosmic_spacer
17 nes_TM Q9UM73 1044 LVAALVLAFSGIMIVY HHHHHHHHHHHHHHHH c1a-5 boundary 0.0 Medium: -39.94 cosmic_phi_to_LIVMF
18 nes_diso Q9UM73 1062 KHQELQAMQMELQS HHHHHHHHHHHCCC c2-AT-4 boundary 0.0 NA cosmic_spacer
19 nes_diso Q9UM73 1158 EQDELDFLMEALIISK HHHHHHHHHHHHHHHC c1a-4 boundary middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.0 Strong: -41.544 cosmic_phi Strong|
20 nes_diso Q9UM73 1160 DELDFLMEALIISK HHHHHHHHHHHHHC c2-4 boundary middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.0 Bad: -26.145 cosmic_phi
21 nes_diso Q9UM73 1179 IVRCIGVSLQSLPRFILL EEEEEEEECCCCCCCHHH c4-5 boundary middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.38 NA cosmic_phi_to_LIVMF
22 nes_beta_diso Q9UM73 1179 IVRCIGVSLQSLPR EEEEEEEECCCCCC c3-4 boundary middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.71 NA cosmic_phi_to_LIVMF
23 nes_diso Q9UM73 1183 IGVSLQSLPRFILLEL EEEECCCCCCCHHHHC c1aR-4 boundary middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.0 Bad: -26.428 cosmic_phi_to_LIVMF
24 low complexity Q9UM73 1189 SLPRFILLELMA CCCCCHHHHCCC c2-rev boundary middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.0 NA cosmic_phi_to_LIVMF
25 nes_diso Q9UM73 1222 AMLDLLHVARDIACGC CHHHHHHHHHHHHHHH c1aR-4 boundary middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.0 Weak: -31.614 cosmic_phi_to_LIVMF Weak|
26 nes_ord Q9UM73 1261 GPGRVAKIGDFGMAR CCCCEEEECCCCCHH c1b-4 ORD middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.57 NA cosmic_phi_to_LIVMF
27 low complexity Q9UM73 1314 SFGVLLWEIFSLGY HHHHHHHHHHHCCC c3-4 ORD middle|PTKc_ALK_LTK; middle|Pkinase_Tyr; 0.0 NA cosmic_spacer
28 nes_diso Q9UM73 1560 SSLTANMKEVPLFR CCCCCCCCCCCCCC c2-AT-4 DISO 0.0 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.