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Q9UPY3_DICER | Endoribonuclease Dicer   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q9UPY3 5 ALQPLSMAGLQLMT CCCCCCHHHHHHCC c2-5 DISO 0.0 Bad: -27.619 cosmic_phi_to_LIVMF
2 nes_ord Q9UPY3 143 TKHQVLIMTCYVALNV HHCCEEEECHHHHHHH c1a-AT-4 ORD middle|DEXHc_dicer; 0.57 NA cosmic_spacer
3 nes_ord Q9UPY3 143 TKHQVLIMTCYVALNV HHCCEEEECHHHHHHH c1d-4 ORD middle|DEXHc_dicer; 0.57 NA cosmic_phi
4 nes_ord Q9UPY3 146 QVLIMTCYVALNVLKNG CEEEECHHHHHHHHHCC c1cR-4 ORD middle|DEXHc_dicer; 0.12 NA cosmic_phi_to_LIVMF
5 nes_ord Q9UPY3 160 KNGYLSLSDINLLV HCCCCCHHHEEEEE c2-4 ORD middle|DEXHc_dicer; 0.14 Weak: -30.115 cosmic_phi_to_LIVMF
6 nes_ord Q9UPY3 162 GYLSLSDINLLVFDEC CCCCHHHEEEEEEECH c1aR-4 ORD middle|DEXHc_dicer; 0.57 NA cosmic_spacer
7 nes_diso Q9UPY3 266 LYERLLMELEEALNFIN HHHHHHHHHHHHHHHHH c1c-4 boundary boundary|DEXHc_dicer; boundary|Dicer_PBD; 0.0 Weak: -30.551 cosmic_spacer Weak|
8 nes_diso Q9UPY3 270 LLMELEEALNFIND HHHHHHHHHHHHHH c3-4 boundary boundary|DEXHc_dicer; boundary|Dicer_PBD; 0.0 Weak: -31.476 cosmic_spacer Weak|
9 nes_diso Q9UPY3 322 AGMMVRELQKYIKHEQ HHHHHHHHHHHHHHCH c1aR-4 boundary middle|Dicer_PBD; 0.0 Bad: -26.444 cosmic_phi
10 nes_diso Q9UPY3 343 KFLLFTDTFLRKIHALC HHHHHHHHHHHHHHHHH c1cR-5 boundary boundary|Dicer_PBD; boundary|SF2_C_dicer; 0.0 Weak: -32.054 cosmic_phi_to_LIVMF Weak|
11 nes_diso Q9UPY3 366 ASLDLKFVTPKVIKLL HHCCCCCCCHHHHHHH c1aR-5 boundary boundary|Dicer_PBD; boundary|SF2_C_dicer; 0.0 Bad: -26.476 cosmic_phi_to_LIVMF
12 nes_diso Q9UPY3 369 DLKFVTPKVIKLLEILR CCCCCCHHHHHHHHHHH c1c-5 boundary boundary|Dicer_PBD; boundary|SF2_C_dicer; 0.0 Bad: -28.071 cosmic_phi_to_LIVMF
13 nes_diso Q9UPY3 369 DLKFVTPKVIKLLE CCCCCCHHHHHHHH c3-4 boundary boundary|Dicer_PBD; boundary|SF2_C_dicer; 0.0 Weak: -31.259 cosmic_phi_to_LIVMF Weak|
14 nes_diso Q9UPY3 434 FPSPFTNILCGIIFVER CCCCCCCCEEEEEEECC c1c-4 boundary middle|SF2_C_dicer; 0.5 NA cosmic_spacer
15 nes_diso Q9UPY3 434 FPSPFTNILCGIIFVE CCCCCCCCEEEEEEEC c1a-4 boundary middle|SF2_C_dicer; 0.43 Bad: -29.456 cosmic_phi
16 nes_beta_diso Q9UPY3 437 PFTNILCGIIFVER CCCCCEEEEEEECC c3-4 boundary middle|SF2_C_dicer; 0.71 NA cosmic_phi
17 nes_diso Q9UPY3 514 NLLIATSIVEEGVDIPK CEEEECCCCCCCCCCCC c1c-AT-5 boundary middle|SF2_C_dicer; 0.12 NA cosmic_spacer
18 nes_diso Q9UPY3 549 SKGRARAPISNYIMLAD HHHCCCCCCCEEEEEEC c1c-AT-4 __ boundary|SF2_C_dicer; 0.25 NA
19 nes_diso Q9UPY3 676 RASIVGPPMSCVRLAE CCEEECCCCCCHHHHH c1a-4 boundary middle|Dicer_dimer; 0.14 Bad: -21.889
20 nes_beta_diso Q9UPY3 766 QPCYLYVIGMVLTT CCEEEEEEEEEEEC c2-4 boundary 1.0 NA cosmic_phi
21 nes_diso Q9UPY3 832 KKSGFMLSLQMLELIT CCCCCCCCHHHHHHHH c1a-4 boundary 0.0 Medium: -35.024 cosmic_phi_to_LIVMF Medium|
22 nes_diso Q9UPY3 834 SGFMLSLQMLELIT CCCCCCHHHHHHHH c2-4 boundary 0.0 Medium: -35.81 cosmic_phi_to_LIVMF Medium|
23 nes_diso Q9UPY3 838 LSLQMLELITRLHQYI CCHHHHHHHHHHHHHH c1aR-4 boundary 0.0 Medium: -39.053 cosmic_spacer Medium|
24 nes_diso Q9UPY3 943 HRFYVADVYTDLTPLS CEEEEEEECCCCCCCC c1aR-5 boundary middle|PAZ_dicer_like; 0.57 NA
25 nes_diso Q9UPY3 976 YNLDLTNLNQPLLDVD CCCCCCCCCCCCEEEE c1aR-5 boundary boundary|PAZ_dicer_like; 0.0 Medium: -35.365 cosmic_spacer Medium|
26 nes_diso Q9UPY3 979 DLTNLNQPLLDVDH CCCCCCCCCEEEEE c3-4 boundary boundary|PAZ_dicer_like; 0.14 Bad: -28.476 cosmic_spacer
27 nes_ord Q9UPY3 1053 CLPSILYRLHCLLT HHHHHHHHHHHHHH c3-4 ORD 0.0 NA cosmic_spacer
28 nes_diso Q9UPY3 1256 PVMAVMPGTTDTIQVLK CCCCCCCCCHHHHHHHH c1c-AT-5 boundary 0.0 NA cosmic_spacer
29 nes_diso Q9UPY3 1257 VMAVMPGTTDTIQVLK CCCCCCCCHHHHHHHH c1a-AT-5 boundary 0.0 NA cosmic_spacer
30 nes_diso Q9UPY3 1292 PNPGLILQALTLSN CCHHHHHHHHHCCC c2-4 boundary boundary|RIBOc; 0.0 Weak: -30.979 Weak|
31 nes_ord Q9UPY3 1306 ASDGFNLERLEMLG CCCCCCCCHHHHHH c2-4 ORD boundary|RIBOc; 0.0 Weak: -31.447 cosmic_spacer
32 nes_diso Q9UPY3 1367 SRMVVSIFDPPVNWLP CCEEEECCCCCCCCCC c1aR-5 boundary boundary|RIBOc; 0.29 Bad: -19.487 cosmic_spacer
33 nes_diso Q9UPY3 1446 DQEHIRFIDNMLMGS HHHHHHHCCCCCCCH c1b-4 DISO 0.0 Bad: -25.585 cosmic_phi
34 nes_diso Q9UPY3 1458 MGSGAFVKKISLSP CCHHHHHCHHHCCC c2-AT-4 DISO 0.0 NA cosmic_spacer
35 nes_diso Q9UPY3 1577 RAAQLFLCSLGLKV HHHHHHHHHCCCCE c2-4 boundary 0.0 Medium: -34.807 cosmic_spacer Medium|
36 nes_diso Q9UPY3 1579 AQLFLCSLGLKVLPVI HHHHHHHCCCCEECCC c1aR-5 boundary 0.0 Bad: -24.542 cosmic_spacer
37 nes_diso Q9UPY3 1658 TLNHLISGFENFEK HHHHHHHHHHHHHH c3-4 boundary boundary|Rnc; boundary|RIBOc; 0.0 Medium: -33.481 cosmic_spacer Medium|
38 nes_ord Q9UPY3 1736 RSALVNNTIFASLAVKY HHHHHCHHHHHHHHHHC c1c-4 ORD middle|Rnc; middle|RIBOc; 0.0 NA cosmic_phi_to_LIVMF
39 nes_diso Q9UPY3 1757 YFKAVSPELFHVID HHHHHCHHHHHHHH c3-4 boundary middle|Rnc; middle|RIBOc; 0.0 Medium: -33.178 cosmic_phi_to_LIVMF Medium|
40 nes_diso Q9UPY3 1764 ELFHVIDDFVQFQLEK HHHHHHHHHHHHHHHH c1a-5 boundary middle|Rnc; middle|RIBOc; 0.0 Medium: -36.188 cosmic_spacer Medium|
41 nes_diso Q9UPY3 1807 AMGDIFESLAGAIYMDS HHHHHHHHHHHHHHHCC c1c-5 boundary middle|Rnc; middle|RIBOc; 0.0 Bad: -28.266 cosmic_phi_to_LIVMF
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.