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Q9Y6Y1_CMTA1 | Calmodulin-binding transcription activator 1   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q9Y6Y1 76 TNEEIAAYLITFEK CHHHHHHHHHHHHH c2-AT-4 boundary boundary|CG-1; 0.0 NA
2 nes_beta_diso Q9Y6Y1 171 NPDIVLVHYLNVPA CCCEEEEEECCCCC c2-4 boundary boundary|CG-1; 0.86 NA cosmic_phi_to_LIVMF
3 nes_diso Q9Y6Y1 214 LIGQLKPMFHGIKW HHHCCCCCCCCCCC c3-4 DISO boundary|CG-1; 0.0 Medium: -38.066 Medium|
4 nes_diso Q9Y6Y1 236 SGFSVEQLVQQILDSH CCCCHHHHHHHHHHCC c1aR-4 DISO 0.0 Weak: -31.252 cosmic_phi_to_LIVMF Weak|
5 nes_diso Q9Y6Y1 373 VDSPVVTGVSGMAVAS CCCCCCCCCCCCCEEC c1a-4 DISO 0.0 Bad: -28.129 cosmic_phi_to_LIVMF
6 nes_diso Q9Y6Y1 382 SGMAVASVMGSLSQSA CCCCEECCCCCCCCCC c1aR-4 DISO 0.29 Medium: -36.366 cosmic_spacer Medium|
7 nes_diso Q9Y6Y1 419 NHHLLSPDASQGLVLAV CCCCCCCCCCCCEEEEE c1c-AT-4 DISO 0.0 NA cosmic_spacer
8 nes_diso Q9Y6Y1 452 SLSMLPTNVSEELVLST CCCCCCCCCCCCEEEEE c1c-5 DISO 0.0 Weak: -30.332 cosmic_spacer Weak|
9 nes_diso Q9Y6Y1 520 RSFSFTTVLTKEIKTED CCCCCCHHHCCCCCCCC c1cR-4 DISO 0.0 Bad: -28.157 cosmic_spacer
10 nes_diso Q9Y6Y1 551 SAAAVAASSLTLTA CHHHHCCCCCCCCC c2-AT-4 DISO 0.0 NA cosmic_spacer
11 nes_diso Q9Y6Y1 575 LSPSTTLEQMDFSA CCCCCCCEECCCCC c2-AT-4 DISO 0.29 NA cosmic_spacer
12 nes_diso Q9Y6Y1 670 SSLHLMQFQANFQAMT CHHHHHHEECCCHHCC c1aR-5 DISO 0.29 Bad: -25.647 cosmic_phi_to_LIVMF
13 nes_diso Q9Y6Y1 673 HLMQFQANFQAMTA HHHHEECCCHHCCC c3-4 DISO 0.29 Medium: -38.907 cosmic_phi_to_LIVMF Medium|
14 nes_diso Q9Y6Y1 754 NASNMELSLDHFDISF CCCCCCCCHHHCCCCC c1a-4 DISO 0.0 Bad: -28.275 cosmic_phi_to_LIVMF
15 nes_diso Q9Y6Y1 756 SNMELSLDHFDISF CCCCCCHHHCCCCC c2-4 DISO 0.0 Weak: -32.29 cosmic_spacer Weak|
16 nes_diso Q9Y6Y1 758 MELSLDHFDISFSNQF CCCCHHHCCCCCCCCC c1aR-4 DISO 0.0 Bad: -26.701 cosmic_spacer
17 nes_diso Q9Y6Y1 769 FSNQFSDLINDFISVEG CCCCCCCCHHHCCCCCC c1c-4 DISO 0.0 Bad: -28.554 cosmic_spacer
18 nes_diso Q9Y6Y1 772 QFSDLINDFISVEG CCCCCHHHCCCCCC c3-4 DISO 0.0 Medium: -38.254 cosmic_spacer Medium|
19 nes_diso Q9Y6Y1 926 PAHDTGLVTLQVAF CCCCCCEEEEEEEE c2-AT-4 boundary boundary|TIG; 0.57 NA cosmic_spacer
20 nes_beta_diso Q9Y6Y1 928 HDTGLVTLQVAFNN CCCCEEEEEEEECC c2-AT-4 boundary boundary|TIG; 0.86 NA cosmic_spacer
21 nes_diso Q9Y6Y1 982 RLEQMERRMAEMTG HHHHHHHHHHHHCC c3-4 DISO boundary|TIG; 0.0 Medium: -33.727 cosmic_phi_to_LIVMF Medium|
22 nes_diso Q9Y6Y1 1026 GTGALGSCFESRVVVVC CCCCCCCCHHHHHHHHH c1c-4 DISO 0.0 Bad: -29.683 cosmic_spacer
23 nes_diso Q9Y6Y1 1054 SKHLIHSKTFRGMTLLH CCCCCCCCCCCCCCHHH c1c-AT-4 boundary boundary|Ank_2; 0.0 NA cosmic_spacer
24 nes_diso Q9Y6Y1 1058 IHSKTFRGMTLLHLAA CCCCCCCCCCHHHHHH c1a-AT-4 boundary boundary|Ank_2; 0.0 NA cosmic_spacer
25 nes_diso Q9Y6Y1 1059 HSKTFRGMTLLHLAA CCCCCCCCCHHHHHH c1b-4 boundary boundary|Ank_2; 0.0 NA cosmic_phi_to_LIVMF
26 nes_diso Q9Y6Y1 1115 MWACALGHLEAAVVLYK HHHHHHCCHHHHHHHHH c1c-AT-4 boundary middle|Ank_2; 0.0 NA cosmic_spacer
27 nes_diso Q9Y6Y1 1116 WACALGHLEAAVVLYK HHHHHCCHHHHHHHHH c1d-4 boundary middle|Ank_2; 0.0 NA cosmic_phi_to_LIVMF
28 nes_diso Q9Y6Y1 1135 RAISIPDSLGRLPLGIAR CCCCCCCCCCCCHHHHHH c4-4 boundary boundary|Ank_2; 0.0 Medium: -33.521 cosmic_spacer Medium|
29 nes_diso Q9Y6Y1 1322 NSKDLYIGVSTVQVTG CCCCCCCCCCCCCCCC c1a-4 DISO 0.0 Bad: -27.478 cosmic_spacer
30 nes_diso Q9Y6Y1 1324 KDLYIGVSTVQVTG CCCCCCCCCCCCCC c2-4 DISO 0.0 Bad: -23.728 cosmic_spacer
31 nes_diso Q9Y6Y1 1389 PMDDIQVNMMTLAE CCCHHCHHHHHHHH c2-5 DISO 0.0 Medium: -37.791 cosmic_spacer Medium|
32 nes_diso Q9Y6Y1 1389 PMDDIQVNMMTLAE CCCHHCHHHHHHHH c3-4 DISO 0.0 Medium: -35.674 cosmic_phi Medium|
33 nes_diso Q9Y6Y1 1393 IQVNMMTLAEHIIEAT HCHHHHHHHHHHHHHC c1aR-4 DISO 0.0 Weak: -31.65 cosmic_phi Weak|
34 nes_diso Q9Y6Y1 1471 SLSPVGSPVSEIAFEK CCCCCCCCCCCHHCCC c1a-5 DISO 0.0 Bad: -17.989 cosmic_spacer
35 nes_diso Q9Y6Y1 1503 TSEKVENEFAQLTLSD CHHHHHHHHHHHHCCH c1a-4 DISO 0.0 Strong: -45.318 cosmic_phi_to_LIVMF Strong|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.