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O14746_TERT | Telomerase reverse transcriptase   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)
  • Reference DB: NESdb:53 validNES:P049
  • PMIDs: 10835362
  • Species: Homo sapiens (Human)
  • Evidence: LMB Sensitive, Binds CRM1
  • Mutation(export): Unknown
  • Mutation(bind): L974A/L978A/L980A
  • Functional seq: Undetermined
  • Sites: 831-1132


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso O14746 20 EVLPLATFVRRLGP CCCCHHHHHHHHCC c3-4 boundary 0.0 Bad: -28.619
2 nes_diso O14746 73 QVSCLKELVARVLQ CCCCHHHHHHHHHH c3-4 boundary 0.0 Medium: -35.149 Medium|
3 nes_diso O14746 89 CERGAKNVLAFGFALLD HHCCCCCEEECCCCCCC c1c-AT-4 boundary 0.38 NA
4 nes_diso O14746 136 AWGLLLRRVGDDVLVHL HHHHHHHHHHHHHHHHH c1c-4 boundary 0.0 Bad: -27.445
5 nes_diso O14746 137 WGLLLRRVGDDVLVHL HHHHHHHHHHHHHHHH c1aR-4 boundary 0.0 Bad: -28.097
6 nes_diso O14746 146 DDVLVHLLARCALFVLV HHHHHHHHHHCCCEEEC c1c-AT-4 boundary 0.0 NA
7 nes_diso O14746 149 LVHLLARCALFVLVAP HHHHHHHCCCEEECCC c1a-AT-5 boundary 0.14 NA
8 nes_diso O14746 343 PSFLLSSLRPSLTGAR CCHHHHCCCCCCCCCH c1aR-4 DISO 0.0 Bad: -29.16
9 nes_diso O14746 353 SLTGARRLVETIFLGS CCCCCHHHHHHHHCCC c1a-AT-5 __ 0.0 NA cosmic_spacer
10 nes_ord O14746 483 NERRFLRNTKKFISLGK HHHHHHHHHHHHHHCCC c1c-AT-4 ORD middle|Telomerase_RBD; 0.0 NA
11 nes_diso O14746 501 AKLSLQELTWKMSVRD CCEEHHHHHCCCCHHH c1aR-4 boundary middle|Telomerase_RBD; 0.0 Medium: -37.776 cosmic_spacer Medium|
12 nes_diso O14746 540 ILAKFLHWLMSVYVVE HHHHHHHHHHHHCHHH c1a-5 boundary middle|Telomerase_RBD; 0.0 Weak: -32.184 cosmic_phi_to_LIVMF Weak|
13 nes_diso O14746 576 YRKSVWSKLQSIGIRQ EEHHHHHHHHHHHHHH c1a-4 boundary boundary|Telomerase_RBD; 0.0 Weak: -30.304 Weak|
14 nes_diso O14746 585 QSIGIRQHLKRVQLRE HHHHHHHHHHHHEEEE c1a-4 boundary boundary|Telomerase_RBD; boundary|RT_like superfamily; 0.0 Weak: -32.32 Weak|
15 nes_diso O14746 612 ARPALLTSRLRFIP HCCCCCCCCEEEEE c2-AT-4 boundary boundary|Telomerase_RBD; boundary|RT_like superfamily; 0.14 NA
16 nes_diso O14746 650 RAERLTSRVKALFSVLN HHHHHHHHHHHHHHHHH c1c-4 boundary middle|RT_like superfamily; 0.0 Medium: -36.112 Medium|
17 nes_diso O14746 672 RPGLLGASVLGLDD CCCCCCCCCCCHHH c2-AT-4 boundary middle|RT_like superfamily; 0.0 NA cosmic_spacer
18 nes_beta_diso O14746 702 PPPELYFVKVDVTG CCCCEEEEECCCCC c2-4 boundary boundary|RT_like superfamily; 0.71 NA
19 nes_diso O14746 765 TLTDLQPYMRQFVA CCCCCCHHHHHHHH c3-4 boundary 0.0 Medium: -33.958 Medium|
20 nes_diso O14746 797 SLNEASSGLFDVFLRF CEECCCHHHHHHHHHH c1a-AT-5 boundary boundary|TERT; 0.0 NA
21 nes_ord O14746 858 RRDGLLLRLVDDFLLVT
.................		 CCCCEEEEECCCEEEEE c1c-4 ORD middle|TERT; 0.62 NA cosmic_spacer
22 nes_ord O14746 859 RDGLLLRLVDDFLLVTP
.................		 CCCEEEEECCCEEEEEC c1c-4 ORD middle|TERT; 0.62 NA cosmic_spacer
23 nes_ord O14746 859 RDGLLLRLVDDFLLVT
................		 CCCEEEEECCCEEEEE c1a-4 ORD middle|TERT; 0.57 NA cosmic_spacer
24 nes_ord O14746 860 DGLLLRLVDDFLLVTP
................		 CCEEEEECCCEEEEEC c1aR-4 ORD middle|TERT; 0.57 NA cosmic_spacer
25 nes_ord O14746 862 LLLRLVDDFLLVTPHLTH
..................		 EEEEECCCEEEEECCHHH c4-5 ORD middle|TERT; 0.62 NA cosmic_spacer
26 low complexity O14746 862 LLLRLVDDFLLVTP
..............		 EEEEECCCEEEEEC c3-4 ORD middle|TERT; 0.57 NA cosmic_spacer
27 nes_diso O14746 929 PWCGLLLDTRTLEVQS
................		 CCCCEEEECCCCCEEC c1a-AT-4 boundary boundary|TERT; 0.57 NA cosmic_spacer
28 nes_ord O14746 946 YSSYARTSIRASLTFNR
.................		 CCCCCCCCCHHHCCCCC c1c-AT-4 ORD boundary|TERT; 0.0 NA cosmic_spacer
29 ExpNES_ord O14746 966 AGRNMRRKLFGVLRLKC
........*...*.*..		 HHHHHHHHHHHHHHHHH c1c-4 ORD boundary|TERT; 0.0 NA
30 nes_ord O14746 993 SLQTVCTNIYKILLLQ
................		 CHHHHHHHHHHHHHHH c1a-5 ORD 0.0 NA
31 nes_ord O14746 1008 QAYRFHACVLQLPF
..............		 HHHHHHHHHHHCHH c2-AT-4 ORD 0.0 NA cosmic_spacer
32 nes_ord O14746 1010 YRFHACVLQLPFHQ
..............		 HHHHHHHHHCHHCC c2-AT-4 ORD 0.0 NA cosmic_spacer
33 nes_diso O14746 1069 AVQWLCHQAFLLKLTR
................		 HHHHHHHHHHHHHHHH c1a-AT-5 __ 0.0 NA
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.