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O15360_FANCA | Fanconi anemia group A protein   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Cosmic Cancer Gene Census (CGC)
  • Reference DB: NESdb:112
  • PMIDs: 15790592
  • Species: Homo sapiens (Human)
  • Evidence: LMB Sensitive
  • Mutation(export): L72A/L74A, F276A/L278A, M528A/L530A, F868A/F870A, L1028A/L1030A
  • Mutation(bind): Unknown
  • Functional seq: 56DLNALLLEVEGPLCKKLSLSKVIDCDS82,263PQVTVDVLQRMLIFALDALAAG284,518LADLKVSIENMGLYEDL534,860LSPGLIKKFQFLMFRLFSEAR880,1013GNEDIISRLQEMVADLELQQDLIVPLGHTPS1043
  • Sites: -


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso O15360 53 SHQDLNALLLEVEGPLCK HCCCHHHHHHHCCCCHHH c4-4 boundary 0.0 Weak: -31.071 Weak|
2 ExpNES_diso O15360 60 LLLEVEGPLCKKLSLSK
            * *  		 HHHHCCCCHHHCCCCCC c1c-5 boundary 0.0 Medium: -36.826 Medium|
3 nes_diso O15360 94 IGSALQDQASRLGVPV HHHHHHHHHHHHCCCH c1a-AT-4 DISO 0.0 NA cosmic_spacer
4 nes_diso O15360 152 AQYLLAHSMFSRLSFCQ HHHHHHCCCCCHHHHHH c1c-4 boundary boundary|Fanconi_A_N; 0.0 Medium: -34.684 cosmic_spacer Medium|
5 nes_diso O15360 166 FCQELWKIQSSLLLEA HHHHHHHCCCCHHHHH c1d-4 boundary boundary|Fanconi_A_N; 0.0 Bad: -28.34 cosmic_spacer
6 nes_diso O15360 230 VARAMLSDFVQMFVLRG HHHHHHHHHHHHHHHHH c1c-4 boundary middle|Fanconi_A_N; 0.0 Medium: -35.566 Medium|
7 nes_diso O15360 230 VARAMLSDFVQMFVLR HHHHHHHHHHHHHHHH c1a-4 boundary middle|Fanconi_A_N; 0.0 Medium: -38.92 Medium|
8 nes_diso O15360 231 ARAMLSDFVQMFVLRG HHHHHHHHHHHHHHHH c1a-4 boundary middle|Fanconi_A_N; 0.0 Medium: -33.838 Medium|
9 nes_diso O15360 261 KMPQVTVDVLQRMLIFA
               * 		 HCHHHHHHHHHHHHHHH c1c-5 boundary middle|Fanconi_A_N; 0.0 Bad: -26.531
10 ExpNES_diso O15360 265 VTVDVLQRMLIFALDA
           * *  		 HHHHHHHHHHHHHHHH c1a-4 boundary middle|Fanconi_A_N; 0.0 Weak: -32.922 Weak|
11 ExpNES_diso O15360 274 LIFALDALAAGVQEES
  * *           		 HHHHHHHHHHHHHCCC c1aR-4 boundary middle|Fanconi_A_N; 0.0 Weak: -30.395 Weak|
12 nes_diso O15360 350 RTHPLLTSLYRRLFVML CCHHHHHHHHHHHHHHC c1c-4 boundary middle|Fanconi_A_N; 0.0 Bad: -22.78 cosmic_spacer
13 nes_diso O15360 354 LLTSLYRRLFVMLS HHHHHHHHHHHHCC c3-4 boundary middle|Fanconi_A_N; 0.0 Bad: -27.343 cosmic_phi_to_LIVMF
14 nes_ord O15360 385 HWQRVLSFVSALVVCF CHHHHHHHHHHHHHCC c1a-4 ORD middle|Fanconi_A_N; 0.0 NA cosmic_spacer
15 nes_ord O15360 389 VLSFVSALVVCFPE HHHHHHHHHHCCHH c3-4 ORD middle|Fanconi_A_N; 0.0 Bad: -26.166 cosmic_phi_to_LIVMF
16 nes_ord O15360 420 ESCQLDSMVTAFLVVRQ HCCCHHHHHHHHHHHHH c1c-4 ORD middle|Fanconi_A_N; 0.0 Medium: -34.968 cosmic_phi_to_LIVMF
17 nes_ord O15360 420 ESCQLDSMVTAFLVVR HCCCHHHHHHHHHHHH c1a-4 ORD middle|Fanconi_A_N; 0.0 Strong: -40.672 cosmic_phi_to_LIVMF
18 nes_ord O15360 423 QLDSMVTAFLVVRQ CHHHHHHHHHHHHH c3-4 ORD middle|Fanconi_A_N; 0.0 Medium: -33.044 cosmic_spacer
19 low complexity O15360 469 ALVFLFTFLSELVPFE HHHHHHHHHHHCCCCC c1aR-5 boundary middle|Fanconi_A_N; 0.0 Bad: -26.992 cosmic_phi
20 low complexity O15360 469 ALVFLFTFLSELVP HHHHHHHHHHHCCC c3-4 boundary middle|Fanconi_A_N; 0.0 Bad: -24.856 cosmic_phi
21 low complexity O15360 470 LVFLFTFLSELVPFES HHHHHHHHHHCCCCCC c1aR-4 boundary middle|Fanconi_A_N; 0.0 Bad: -19.599 cosmic_phi_to_LIVMF
22 nes_diso O15360 487 RYLQVHILHPPLVPGK HHHHHHHCCCCCCCHH c1aR-4 boundary boundary|Fanconi_A_N; 0.0 Bad: -28.153 cosmic_spacer
23 nes_diso O15360 502 KYRSLLTDYISLAK HHHHHHHHHHHHHH c2-AT-4 boundary boundary|Fanconi_A_N; 0.0 NA cosmic_spacer
24 nes_diso O15360 510 YISLAKTRLADLKVSI HHHHHHHHHHHHCCHH c1a-AT-5 boundary boundary|Fanconi_A_N; 0.0 NA cosmic_spacer
25 ExpNES_diso O15360 517 RLADLKVSIENMGLYE
           * *  		 HHHHHCCHHHHCCCCC c1a-5 boundary boundary|Fanconi_A_N; 0.0 Medium: -33.242 cosmic_spacer Medium|
26 nes_diso O15360 547 ALQDVEKAIMVFEH HHHHHHHHHHHHHH c3-4 boundary boundary|Fanconi_A_N; 0.0 Bad: -26.132
27 nes_diso O15360 649 PLGQLTAALGELRA HHHHHHHHHHHHHH c3-4 boundary 0.0 Medium: -38.856 cosmic_phi Medium|
28 nes_diso O15360 676 QVAVISERLRAVLG HHHHHHHHHHHHHC c3-4 boundary 0.0 Medium: -33.711 Medium|
29 nes_diso O15360 693 DDSSVEISKIQLSI CCCCCCCCCEEEEC c2-4 __ 0.14 Medium: -35.929 Medium|
30 nes_diso O15360 715 EHMAVDLLLTSFCQNL HHHHHHHHHHHHHHHH c1aR-4 boundary 0.0 Weak: -31.403 Weak|
31 nes_diso O15360 719 VDLLLTSFCQNLMAAS HHHHHHHHHHHHHHHH c1aR-4 boundary 0.0 Medium: -36.109 cosmic_spacer Medium|
32 nes_ord O15360 746 AALFVRTMCGRVLPAV HHHHHHHHHHHHHHHH c1aR-4 ORD 0.0 Bad: -26.754 cosmic_spacer
33 nes_ord O15360 757 VLPAVLTRLCQLLR HHHHHHHHHHHHHH c3-4 ORD 0.0 Weak: -31.841
34 nes_diso O15360 778 APHVLGLAALAVHL HHHHHHHHHHHHHH c2-4 boundary 0.0 Medium: -37.564 cosmic_spacer Medium|
35 nes_diso O15360 780 HVLGLAALAVHLGESR HHHHHHHHHHHHHHCC c1aR-4 boundary 0.0 Medium: -36.88 cosmic_spacer Medium|
36 nes_diso O15360 818 FDSLLTCRTRDSLFFCL HHHHCCCCCCCCHHHHH c1c-AT-4 boundary 0.0 NA cosmic_spacer
37 nes_diso O15360 822 LTCRTRDSLFFCLKFCT CCCCCCCCHHHHHHHHH c1c-AT-4 boundary 0.0 NA cosmic_spacer
38 ExpNES_diso O15360 856 LCSCLSPGLIKKFQFLM
            * *  		 HHHHCCHHHHHHHHHHH c1c-4 boundary 0.0 Weak: -30.535 cosmic_spacer Weak|
39 ExpNES_diso O15360 860 LSPGLIKKFQFLMFRL
        * *     		 CCHHHHHHHHHHHHHH c1a-4 boundary 0.0 Medium: -33.761 cosmic_spacer Medium|
40 ExpNES_diso O15360 864 LIKKFQFLMFRLFS
    * *       		 HHHHHHHHHHHHCH c2-5 boundary 0.0 Medium: -38.29 cosmic_spacer Medium|
41 nes_diso O15360 864 LIKKFQFLMFRLFS
    * *       		 HHHHHHHHHHHHCH c3-4 boundary 0.0 Bad: -28.063 cosmic_spacer
42 ExpNES_diso O15360 1017 IISRLQEMVADLELQQ
           * *  		 HHHHHHHHHHHHHCCC c1a-5 boundary 0.0 Medium: -36.55 Medium|
43 nes_diso O15360 1045 EHFLFEIFRRRLQALT CCHHHHHHHHHHHHCC c1aR-5 boundary 0.0 Weak: -30.926 Weak|
44 nes_diso O15360 1048 LFEIFRRRLQALTS HHHHHHHHHHHCCC c3-4 boundary 0.0 Weak: -30.548 Weak|
45 nes_diso O15360 1073 RELLMYKRILLRLPSSV HHHHHHHHHHHCCCCCC c1cR-4 boundary 0.0 Bad: -23.035 cosmic_phi
46 nes_diso O15360 1108 FFHLVNSEMRNFCS HHHHHCHHHHHCCC c3-4 boundary 0.0 Bad: -27.28 cosmic_spacer
47 nes_diso O15360 1221 NPDWLSAAALHFAIQQ CCHHHHHHHHHHHHHH c1a-AT-4 boundary 0.0 NA cosmic_spacer
48 nes_diso O15360 1252 EREELLVFLFFFSLMG CHHHHHHHHHHHHHHH c1a-4 boundary 0.0 Weak: -32.566 cosmic_phi Weak|
49 low complexity O15360 1252 EREELLVFLFFFSL CHHHHHHHHHHHHH c2-4 DISO 0.0 Weak: -30.871 cosmic_spacer_Pro
50 low complexity O15360 1255 ELLVFLFFFSLMGLLS HHHHHHHHHHHHHHHH c1a-5 boundary 0.0 Medium: -38.936 cosmic_spacer
51 nes_diso O15360 1283 KAFHVCAAILECLEKRK HHHHHHHHHHHHHHHCC c1cR-4 __ small|Fanconi_A; 0.0 Bad: -22.609 cosmic_spacer
52 nes_diso O15360 1296 EKRKISWLALFQLTE HHCCCCCHHHHHCCC c1b-4 boundary small|Fanconi_A; 0.0 NA
53 nes_diso O15360 1301 SWLALFQLTESDLRLGR CCHHHHHCCCCCCCCCC c1c-AT-4 boundary 0.0 NA cosmic_spacer
54 nes_diso O15360 1309 TESDLRLGRLLLRV CCCCCCCCCEEHHH c2-4 boundary 0.14 Weak: -32.117 cosmic_spacer Weak|
55 nes_diso O15360 1311 SDLRLGRLLLRVAPDQ CCCCCCCEEHHHCHHH c1aR-4 boundary 0.29 NA
56 nes_diso O15360 1331 LPFAFYSLLSYFHEDA HHHHHHHHHHHCCHHH c1aR-4 boundary 0.0 Bad: -25.499 cosmic_spacer
57 nes_diso O15360 1344 EDAAIREEAFLHVAVDM HHHHHCCHHHHHHHHHH c1c-AT-4 boundary 0.0 NA cosmic_spacer
58 nes_diso O15360 1350 EEAFLHVAVDMYLKLVQ CHHHHHHHHHHHHHHHH c1c-4 boundary 0.0 Bad: -23.796 cosmic_spacer
59 nes_diso O15360 1354 LHVAVDMYLKLVQLFV HHHHHHHHHHHHHHHH c1a-4 boundary 0.0 Bad: -25.745 cosmic_spacer
60 nes_diso O15360 1356 VAVDMYLKLVQLFVAG HHHHHHHHHHHHHHCC c1a-4 boundary 0.0 Medium: -37.387 cosmic_spacer Medium|
61 nes_diso O15360 1356 VAVDMYLKLVQLFV HHHHHHHHHHHHHH c2-4 boundary 0.0 Medium: -38.233 cosmic_spacer Medium|
62 nes_diso O15360 1358 VDMYLKLVQLFVAGDT HHHHHHHHHHHHCCCC c1aR-4 boundary 0.0 Bad: -27.664 cosmic_spacer
63 nes_diso O15360 1358 VDMYLKLVQLFVAG HHHHHHHHHHHHCC c2-4 boundary 0.0 Weak: -31.094 cosmic_spacer Weak|
64 nes_diso O15360 1372 DTSTVSPPAGRSLELKG CCCCCCCCCCCCHHHCC c1c-AT-4 boundary 0.0 NA cosmic_spacer
65 nes_diso O15360 1389 QGNPVELITKARLFLLQ CCCCHHHHHHHHHHHHH c1c-AT-4 DISO 0.0 NA
66 nes_diso O15360 1391 NPVELITKARLFLLQL CCHHHHHHHHHHHHHH c1a-AT-4 DISO 0.0 NA
67 nes_diso O15360 1393 VELITKARLFLLQLIP HHHHHHHHHHHHHHCC c1a-AT-4 DISO 0.0 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.