O94916 | Nuclear factor of activated T-cells 5

O94916_NFAT5 | Nuclear factor of activated T-cells 5 ProteinAtlas Cosmic Proviz Swissmodel

Reference DB: NESdb:175 validNES:P080
PMIDs: 16782704
Species: Homo sapiens (Human)
Evidence: LMB Sensitive
Mutation(export): L8A/L9A/L13A/L15A
Mutation(bind): Unknown
Functional seq: Undetermined
Sites: 1-19

#	candidates	uniprotID	start#	sequence	secondary	class	loc_DISO	loc_CDD	beta	Ebind	TOTALscore(Ebind\|Stars)
1	ExpNES_diso	O94916	2	PSDFISLLSADLDLES ++++++*++++*++	CHHHHHHHHCCCCCCC	c1d-4	DISO		0.0	Weak: -30.271	Weak\|
2	nes_ord	O94916	358	KEVDIEGTTVIEVGLDP	EEEECCCEEEEEEEECC	c1c-AT-4	ORD	middle\|RHD-n_TonEBP;	0.62	NA
3	nes_beta_diso	O94916	374	PSNNMTLAVDCVGILK	CCCCCEEEEEHHHHHH	c1a-4	boundary	middle\|RHD-n_TonEBP;	0.71	Weak: -32.372
4	nes_beta_diso	O94916	376	NNMTLAVDCVGILK	CCCEEEEEHHHHHH	c2-4	boundary	middle\|RHD-n_TonEBP;	0.71	Medium: -39.273
5	nes_beta_diso	O94916	405	KKKSTRARLVFRVNIMR	CCCCCCEEEEEEEEEEC	c1c-AT-4	boundary	boundary\|RHD-n_TonEBP;	0.75	NA
6	nes_diso	O94916	512	HDQHITLPVSVGIYVVT	CCCCCCCCCEEEEEEEC	c1c-4	boundary	boundary\|IPT_NFAT;	0.38	Bad: -26.026
7	nes_diso	O94916	574	AMKTTGCNLDKVNIIP	HHHCCCCCCCCCCCCC	c1a-AT-5	DISO	boundary\|IPT_NFAT;	0.0	NA
8	nes_diso	O94916	767	SVSQLQNTIQQLQA	HHHHHHHHHHHHHC	c3-4	DISO		0.0	Weak: -32.047	Weak\|
9	nes_diso	O94916	800	QVLEAQQQLSSVLFSA	HHHHCCHHHHHCCCCC	c1a-AT-5	DISO		0.0	NA
10	nes_diso	O94916	886	QQQVMESSAAMVMEMQQ	HHHHHHCHHHHHHHHHH	c1c-AT-4	DISO		0.0	NA
11	nes_diso	O94916	1019	PQVNLFSSTKSMMSVQN	CCCCCCCCCCHHHCCCC	c1c-AT-4	DISO		0.0	NA
12	nes_diso	O94916	1503	SSINTNQNIEKIDLLV	CCCCCCHHHHHHHHHH	c1a-AT-4	DISO		0.0	NA
13	nes_diso	O94916	1507	TNQNIEKIDLLVSLQN	CCHHHHHHHHHHHHHH	c1d-4	DISO		0.0	NA

candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
sequence: Hydrophobic positions are colored in red.
class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
loc_DISO: location of the segment with respect to the ordered/disordered regions
loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
beta: beta-strand content in the middle of the segment
Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.