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Q05397_FAK1 | Focal adhesion kinase 1   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Reference DB: NESdb:83
  • PMIDs: 18549812
  • Species: Homo sapiens (Human)
  • Evidence: LMB Sensitive
  • Mutation(export): L90A/V95A/L98A/V100A, L518A/L520A/L523A/L525A
  • Mutation(bind): Unknown
  • Functional seq: 86RLSHLRSEEVHWLHVDMGV104,510FLQVRKYSLDLASLILYAYQL530
  • Sites: -


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_beta_diso Q05397 32 AMERVLKVFHYFES HHHHEEEEEEEECC c3-4 boundary boundary|B41; 0.86 Weak: -30.047
2 ExpNES_ord Q05397 73 DSHKVKHVACYGFRLSH
             ++++		 HCCCCCCCEEEEEHHHC c1c-AT-4 ORD middle|B41; 0.5 NA
3 ExpNES_ord Q05397 91 RSEEVHWLHVDMGVSS
++++*++*+*++++  		 CCCCEEEECCCCCHHH c1d-4 ORD middle|B41; 0.57 Medium: -37.922
4 nes_ord Q05397 122 YELRIRYLPKGFLNQF EEEEEEECCCCHHHHH c1aR-4 ORD middle|B41; boundary|FERM_B-lobe; 0.43 Bad: -19.206
5 nes_diso Q05397 155 YMLEIADQVDQEIALKL HHHHHHHCCCHHHHHHH c1c-5 boundary middle|B41; boundary|FERM_B-lobe; 0.0 Bad: -28.302
6 nes_diso Q05397 163 VDQEIALKLGCLEIRR CCHHHHHHHHHHHHHH c1a-4 boundary middle|B41; boundary|FERM_B-lobe; 0.0 Weak: -32.029 Weak|
7 nes_diso Q05397 165 QEIALKLGCLEIRR HHHHHHHHHHHHHH c2-4 boundary middle|B41; middle|FERM_B-lobe; 0.0 Bad: -28.211
8 nes_ord Q05397 239 SILKFFEILSPVYRFD HHHHHHHHHHHHHHCC c1aR-5 ORD boundary|B41; boundary|FERM_B-lobe; boundary|FERM_C_FAK1; 0.0 Bad: -24.641
9 nes_ord Q05397 242 KFFEILSPVYRFDK HHHHHHHHHHHCCC c3-4 ORD boundary|B41; boundary|FERM_B-lobe; boundary|FERM_C_FAK1; 0.0 Bad: -15.673
10 nes_diso Q05397 346 GYCRLVNGTSQSFIIRP CCCEECCCCCCCEEECC c1c-AT-4 boundary boundary|FERM_C_FAK1; 0.12 NA
11 nes_diso Q05397 380 EKQGMRTHAVSVSE CCCCCCCCCCCCCC c2-AT-4 DISO boundary|FERM_C_FAK1; 0.0 NA
12 nes_beta_diso Q05397 429 GEGQFGDVHQGIYMSP CCCCCEEEEEEEEECC c1d-4 boundary boundary|PTKc_FAK; boundary|Pkinase_Tyr; 0.86 Bad: -27.596
13 ExpNES_ord Q05397 499 MELCTLGELRSFLQVRK
           ++++++		 EEECCCCCHHHHHHHCC c1c-AT-4 ORD middle|PTKc_FAK; middle|Pkinase_Tyr; 0.0 NA
14 ExpNES_ord Q05397 500 ELCTLGELRSFLQVRK
          ++++++		 EECCCCCHHHHHHHCC c1d-5 ORD middle|PTKc_FAK; middle|Pkinase_Tyr; 0.0 NA
15 ExpNES_ord Q05397 514 RKYSLDLASLILYA
++++*+*++*+*++		 CCCCCCHHHHHHHH c2-4 ORD middle|PTKc_FAK; middle|Pkinase_Tyr; 0.0 Medium: -37.702
16 nes_ord Q05397 543 VHRDIAARNVLVSS CCHHHHHHHEEECC c2-AT-4 ORD middle|PTKc_FAK; middle|Pkinase_Tyr; 0.14 NA
17 nes_ord Q05397 556 SNDCVKLGDFGLSR CCCEEEEHHHHCCH c2-4 ORD middle|PTKc_FAK; middle|Pkinase_Tyr; 0.57 Bad: -22.782
18 nes_ord Q05397 601 SASDVWMFGVCMWE CCCHHHHHHHHHHH c2-4 ORD middle|PTKc_FAK; middle|Pkinase_Tyr; 0.0 Bad: -27.421
19 nes_diso Q05397 668 RFTELKAQLSTILE CHHHHHHHHHHHHH c3-4 boundary boundary|PTKc_FAK; boundary|Pkinase_Tyr; 0.0 Weak: -30.962 Weak|
20 nes_diso Q05397 792 TVLDLRGIGQVLPTHL HHHCHHCCCCCCCHHH c1aR-4 DISO 0.0 Bad: -23.969
21 nes_diso Q05397 924 VYENVTGLVKAVIEMSS HHHHHHHHHHHHHHHHH c1c-4 boundary boundary|Focal_AT; 0.0 Weak: -31.564 Weak|
22 nes_diso Q05397 927 NVTGLVKAVIEMSS HHHHHHHHHHHHHH c3-4 boundary boundary|Focal_AT; 0.0 Medium: -34.711 Medium|
23 nes_diso Q05397 950 YVPMVKEVGLAL HHHHHHHHHHHH c2-rev boundary middle|Focal_AT; 0.0 Bad: -26.426
24 nes_diso Q05397 953 MVKEVGLALRTLLA HHHHHHHHHHHHHH c3-4 boundary middle|Focal_AT; 0.0 Medium: -39.56 Medium|
25 nes_diso Q05397 957 VGLALRTLLATVDETI HHHHHHHHHHHHHHHC c1aR-4 boundary middle|Focal_AT; 0.0 Bad: -28.987
26 nes_diso Q05397 971 TIPLLPASTHREIEMAQ HCCCCCHHHHHHHHHHH c1c-AT-5 boundary middle|Focal_AT; 0.0 NA
27 nes_diso Q05397 990 LNSDLGELINKMKLAQ HHHHHHHHHHHHHHHH c1a-4 boundary middle|Focal_AT; 0.0 Weak: -31.297 Weak|
28 nes_diso Q05397 1016 YKKQMLTAAHALAVDA HHHHHHHHHHHHHHHH c1a-AT-4 boundary boundary|Focal_AT; 0.0 NA
29 nes_diso Q05397 1023 AAHALAVDAKNLLDVID HHHHHHHHHHHHHHHHH c1c-AT-4 boundary boundary|Focal_AT; 0.0 NA
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.