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Q7RTN6_STRAA | STE20-related kinase adapter protein alpha   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Reference DB: NESdb:154
  • PMIDs: 18256292
  • Species: Homo sapiens (Human)
  • Evidence: LMB Sensitive, Binds CRM1
  • Mutation(export): Unknown
  • Mutation(bind): L27A/L29A/L421A/L424A
  • Functional seq: Undetermined
  • Sites: -


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q7RTN6 7 KPERIRRWVSEKFIVEG CHHHHHHHHCCCHHHHC c1c-4 DISO 0.0 Weak: -31.933 cosmic_spacer Weak|
2 ExpNES_diso Q7RTN6 16 SEKFIVEGLRDLELFG
           * *  		 CCCHHHHCCCCHHHHC c1a-4 DISO 0.0 Medium: -38.208 Medium|
3 nes_diso Q7RTN6 71 LLTVIGKGFEDLMTVNL EEEEEECCCCCCEEEEE c1c-5 boundary boundary|S_TKc; boundary|PK_STRAD_alpha; 0.25 Medium: -38.24 cosmic_spacer Medium|
4 nes_diso Q7RTN6 71 LLTVIGKGFEDLMT EEEEEECCCCCCEE c3-4 boundary boundary|S_TKc; boundary|PK_STRAD_alpha; 0.43 Weak: -31.914 cosmic_spacer Weak|
5 nes_beta_ord Q7RTN6 93 TGEYVTVRRINLEA CCCEEEEEEEEHHH c2-4 ORD middle|S_TKc; middle|PK_STRAD_alpha; 1.0 Weak: -30.743 cosmic_spacer
6 nes_ord Q7RTN6 107 CSNEMVTFLQGELHVSK CCHHHHHHHHHHHHHHH c1c-4 ORD middle|S_TKc; middle|PK_STRAD_alpha; 0.0 Strong: -41.326 cosmic_spacer
7 nes_ord Q7RTN6 159 ICTHFMDGMNELAIAY HHCCCCCCCCHHHHHH c1a-4 ORD middle|S_TKc; middle|PK_STRAD_alpha; 0.0 Medium: -36.166 cosmic_spacer
8 nes_ord Q7RTN6 168 NELAIAYILQGVLKAL CHHHHHHHHHHHHHHH c1aR-4 ORD middle|S_TKc; middle|PK_STRAD_alpha; 0.0 Weak: -32.283 cosmic_spacer
9 nes_ord Q7RTN6 175 ILQGVLKALDYIHH HHHHHHHHHHHHHH c3-4 ORD middle|S_TKc; middle|PK_STRAD_alpha; 0.0 Weak: -30.508 cosmic_spacer
10 nes_ord Q7RTN6 197 KASHILISVDGKVYLSG CHHHEEECCCCCEEECC c1c-4 ORD middle|S_TKc; middle|PK_STRAD_alpha; 0.38 Bad: -26.746 cosmic_phi_to_LIVMF
11 nes_ord Q7RTN6 207 GKVYLSGLRSNLSMIS CCEEECCCCCEEEEEE c1aR-5 ORD middle|S_TKc; middle|PK_STRAD_alpha; 0.29 Bad: -27.609 cosmic_phi_to_LIVMF
12 nes_ord Q7RTN6 210 YLSGLRSNLSMISH EECCCCCEEEEEEC c3-4 ORD middle|S_TKc; middle|PK_STRAD_alpha; 0.43 Bad: -26.612 cosmic_spacer
13 nes_ord Q7RTN6 254 QGYDAKSDIYSVGITA CCCCCHHHHHHHHHHH c1a-AT-4 ORD middle|S_TKc; middle|PK_STRAD_alpha; 0.0 NA
14 nes_diso Q7RTN6 278 PFKDMPATQMLLEK CCCCCCHHHHHHHH c2-AT-5 boundary middle|S_TKc; middle|PK_STRAD_alpha; 0.0 NA
15 nes_diso Q7RTN6 285 TQMLLEKLNGTVPCLL HHHHHHHHCCCCCCCC c1aR-5 boundary middle|S_TKc; middle|PK_STRAD_alpha; 0.0 Bad: -24.745 cosmic_spacer
16 nes_diso Q7RTN6 301 DTSTIPAEELTMSP CCCCCCHHHHCCCC c2-AT-4 boundary middle|S_TKc; middle|PK_STRAD_alpha; 0.0 NA
17 ExpNES_diso Q7RTN6 413 GIFGLVTNLEELEVDD
        *  *    		 CCCCCCCCHHHCCCCC c1a-5 DISO boundary|S_TKc; boundary|PK_STRAD_alpha; 0.0 Strong: -46.286 cosmic_phi_to_LIVMF Strong|
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.