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Q99741_CDC6 | Cell division control protein 6 homolog   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Reference DB: NESdb:260
  • PMIDs: 11346650;24216307
  • Species: Homo sapiens (Human)
  • Evidence: LMB Sensitive, Binds CRM1
  • Mutation(export): L311A/L313A, L468A/L470A
  • Mutation(bind): L311A/L313A, L468A/L470A
  • Functional seq: 310HLVLIG315
  • Sites: -


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_ord Q99741 215 ILQDLKKELKGFKT HHHHHHHHCCCCCE c3-4 ORD middle|CDC6; middle|AAA; 0.0 Bad: -29.047 cosmic_spacer
2 nes_ord Q99741 222 ELKGFKTIMLNCMSLRT HCCCCCEEEEECCCCCC c1c-5 ORD middle|CDC6; middle|AAA; 0.62 Bad: -26.175 cosmic_phi_to_LIVMF
3 nes_beta_ord Q99741 225 GFKTIMLNCMSLRT CCCEEEEECCCCCC c2-5 ORD middle|CDC6; middle|AAA; 0.71 Bad: -29.227 cosmic_phi_to_LIVMF
4 nes_ord Q99741 278 MIVLVLDEMDQLDS EEEEEEEHHHHHCC c3-4 ORD middle|CDC6; middle|AAA; 0.57 Weak: -30.72
5 nes_beta_diso Q99741 308 NSHLVLIGIANTLDLTD
  +*+*++         		 CCEEEEEEEECCCCCHH c1c-4 boundary middle|CDC6; boundary|AAA; 0.75 Bad: -28.222 cosmic_spacer
6 ExpNES_beta_diso Q99741 309 SHLVLIGIANTLDLTD
 +*+*++         		 CEEEEEEEECCCCCHH c1aR-4 boundary middle|CDC6; boundary|AAA; 0.71 Medium: -38.962 cosmic_spacer
7 nes_ord Q99741 351 IVTILQDRLNQVSR HHHHHHHHHHCCCC c3-4 ORD middle|CDC6; boundary|AAA; 0.0 Bad: -28.819
8 nes_diso Q99741 379 KVSAVSGDVRKALDVCR HHHHHHHHHHHHHHHHH c1c-5 boundary middle|CDC6; 0.0 Medium: -38.153 cosmic_phi_to_LIVMF Medium|
9 nes_diso Q99741 421 SEPLIPKRVGLIHISQ CCCCCCCCCCHHHHHH c1a-4 boundary middle|CDC6; 0.0 Bad: -26.694 cosmic_spacer
10 nes_diso Q99741 427 KRVGLIHISQVISEVD CCCCHHHHHHHHHHHH c1aR-5 boundary middle|CDC6; 0.0 Weak: -31.189 cosmic_spacer Weak|
11 nes_diso Q99741 430 GLIHISQVISEVDG CHHHHHHHHHHHHC c3-4 boundary middle|CDC6; 0.0 Bad: -23.227 cosmic_spacer
12 nes_diso Q99741 464 LVCSLMLLIRQLKIKE
    * *         		 HHHHHHHHHHHCCCCC c1a-5 boundary middle|CDC6; boundary|Cdc6_C; 0.0 Strong: -40.703 Strong|
13 nes_ord Q99741 523 RNKETRLTKVFFKI CCCCCCCCEEEEEC c2-AT-4 ORD boundary|CDC6; boundary|Cdc6_C; 0.29 NA cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.