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Q9P286_PAK5 | Serine/threonine-protein kinase PAK 5   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Reference DB: NESdb:236
  • PMIDs: 16581795
  • Species: Homo sapiens (Human)
  • Evidence: LMB Sensitive
  • Mutation(export): L401A/L404A/L406A
  • Mutation(bind): Unknown
  • Functional seq: Undetermined
  • Sites: -


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 nes_diso Q9P286 81 SINGLLEDFDNISVTR CCCCCCCCCCCCCCCC c1a-5 DISO 0.0 Medium: -37.082 cosmic_phi_to_LIVMF Medium|
2 nes_diso Q9P286 184 EVKPLKSDFARFSA CCCCCCCCCCCCCC c3-4 DISO 0.0 Bad: -22.197 cosmic_spacer
3 ExpNES_diso Q9P286 393 QYISTASYLSSLSLSS
        *  * *  		 CCCCCCHHCCCCCCCC c1a-AT-4 DISO boundary|STKc_PAK5; 0.0 Medium: -38.752 cosmic_spacer Medium|
4 nes_beta_ord Q9P286 471 TGKQVAVKKMDLRK CCCEEEEEECCCCH c2-4 ORD middle|STKc_PAK5; boundary|S_TKc; 0.86 Bad: -24.981 cosmic_phi
5 nes_ord Q9P286 486 QRRELLFNEVVIMR HHHHHHHHHHHHHH c2-4 ORD middle|STKc_PAK5; middle|S_TKc; 0.0 Medium: -36.037 cosmic_phi_to_LIVMF
6 nes_ord Q9P286 541 NEEQIATVCLSVLR CHHHHHHHHHHHHH c2-AT-4 ORD middle|STKc_PAK5; middle|S_TKc; 0.0 Bad: -23.24 cosmic_spacer
7 nes_diso Q9P286 578 SDGRIKLSDFGFCA CCCCEEECCCCCCE c2-4 boundary middle|STKc_PAK5; middle|S_TKc; 0.43 Bad: -24.507 cosmic_phi_to_LIVMF
8 nes_diso Q9P286 585 SDFGFCAQVSKEVPKRK CCCCCCEECCCCCCCCC c1cR-4 boundary middle|STKc_PAK5; middle|S_TKc; 0.25 Bad: -21.859 cosmic_phi_to_LIVMF
9 low complexity Q9P286 625 DIWSLGIMVIEMID EEEECEEHHHHCCC c2-5 ORD middle|STKc_PAK5; middle|S_TKc; 0.43 Strong: -42.059 cosmic_phi_to_LIVMF
10 low complexity Q9P286 625 DIWSLGIMVIEMID EEEECEEHHHHCCC c3-4 ORD middle|STKc_PAK5; middle|S_TKc; 0.43 Medium: -37.668 cosmic_phi_to_LIVMF
11 nes_ord Q9P286 668 KVSSVLRGFLDLMLVR HCCHHHHHHHHHHCCC c1a-5 ORD middle|STKc_PAK5; boundary|S_TKc; 0.0 Medium: -38.799 cosmic_spacer
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.