HOME Exp-NES Cancer-NES Human-NES Documentation Contact
Q9UK80_UBP21 | Ubiquitin carboxyl-terminal hydrolase 21   ProteinAtlas   Cosmic   Proviz   Swissmodel
  • Reference DB: validNES:P213
  • PMIDs: 21888622
  • Species: Homo sapiens (Human)
  • Evidence: LMB Sensitive
  • Mutation(export): -
  • Mutation(bind): -
  • Functional seq: -
  • Sites: 134-152


# candidates uniprotID start# sequence secondary class loc_DISO loc_CDD beta Ebind Score(NES) Cosmic Score(Cosmic) TOTALscore(Ebind|Stars)
1 ExpNES_diso Q9UK80 131 GTGELGAALSRLALRP
   +++++++++++++		 CCCCCCCCCCHHCCCC c1a-4 DISO 0.0 Medium: -36.843 cosmic_phi Medium|
2 nes_ord Q9UK80 237 RDFCLRRDFRQEVPGGG HHHHHCCHHHHHCCCCC c1cR-4 ORD middle|UCH; middle|Peptidase_C19R; 0.0 Bad: -20.804 cosmic_spacer
3 nes_diso Q9UK80 301 DAQEFLKLLMERLHLEI HHHHHHHHHHHHHHHHH c1c-4 boundary middle|UCH; middle|Peptidase_C19R; 0.0 Weak: -32.092 cosmic_spacer Weak|
4 nes_diso Q9UK80 302 AQEFLKLLMERLHLEI HHHHHHHHHHHHHHHH c1a-4 boundary middle|UCH; middle|Peptidase_C19R; 0.0 Medium: -35.783 cosmic_spacer Medium|
5 nes_diso Q9UK80 304 EFLKLLMERLHLEI HHHHHHHHHHHHHH c2-5 boundary middle|UCH; middle|Peptidase_C19R; 0.0 Weak: -30.804 cosmic_spacer Weak|
6 nes_diso Q9UK80 306 LKLLMERLHLEINRRG HHHHHHHHHHHHHHCC c1aR-4 boundary middle|UCH; middle|Peptidase_C19R; 0.0 Bad: -28.135 cosmic_spacer
7 nes_beta_diso Q9UK80 371 VDLFVGQLKSCLKCQA HHHHCCEEEEEEECCC c1aR-4 boundary middle|UCH; middle|Peptidase_C19R; 0.71 Weak: -32.05 cosmic_spacer
8 nes_diso Q9UK80 388 GYRSTTFEVFCDLSLPI CCEECCCCCCCEEECCC c1c-AT-4 boundary middle|UCH; middle|Peptidase_C19R; 0.12 NA cosmic_spacer
9 nes_diso Q9UK80 389 YRSTTFEVFCDLSLPI CEECCCCCCCEEECCC c1a-AT-4 boundary middle|UCH; middle|Peptidase_C19R; 0.14 NA cosmic_spacer
10 nes_diso Q9UK80 390 RSTTFEVFCDLSLPI EECCCCCCCEEECCC c1b-4 boundary middle|UCH; middle|Peptidase_C19R; 0.29 NA cosmic_spacer
11 nes_diso Q9UK80 392 TTFEVFCDLSLPIPKKG CCCCCCCEEECCCCCCC c1cR-4 boundary middle|UCH; middle|Peptidase_C19R; 0.38 NA cosmic_spacer
12 nes_ord Q9UK80 448 KKLTVQRFPRILVLHL EEEEEEECCCEEEEEE c1aR-4 ORD middle|UCH; middle|Peptidase_C19R; 0.57 Bad: -23.111 cosmic_phi_to_LIVMF
13 low complexity Q9UK80 454 RFPRILVLHLNR ECCCEEEEEEEC c2-rev ORD middle|UCH; middle|Peptidase_C19R; 0.83 Bad: -22.578 cosmic_phi_to_LIVMF
14 nes_ord Q9UK80 476 SSVGVDFPLQRLSLGD CCCCCCCCCCCCCCHH c1a-4 ORD middle|UCH; middle|Peptidase_C19R; 0.0 Medium: -36.959
15 nes_ord Q9UK80 478 VGVDFPLQRLSLGD CCCCCCCCCCCCHH c2-4 ORD middle|UCH; middle|Peptidase_C19R; 0.0 Medium: -35.534
  • candidates: if the segment is located in the disordered or boundary region, flagged with "_diso"; if the segment is located in the ordered region, flagged with "_ord"; if the segment's beta-strand content is over 0.5, flagged with "_beta"; if the segment is annotated as NES in the NESdb or validNES, flagged with "ExpNES_" instead of "nes_".
  • sequence: Hydrophobic positions are colored in red.
  • class: NES classes 1a, 1b, 1c, 1d, 1aR (reverse class of 1a), 1cR, 2, 2-rev (Rev type class 2), 3, and 4. The first letter "c" is for "class", and the number after hyphen ("-") is for the number of key hydrophobic positions. For example, c1a-4 means class 1a with the non-hydrophobic phi0 position. c1a-5 is for class 1a which have all hydrophobic residues in their phi0-4 positions.
  • loc_DISO: location of the segment with respect to the ordered/disordered regions
  • loc_CDD: location of the segment with respect to the conserved region annotated in the Conserved Domain Database (CDD)
  • beta: beta-strand content in the middle of the segment
  • Ebind: binding energy; Strong (less than -40.0), Medium (-40.0~-33.0), Weak (-33.0~-30.0), or Bad (higher than -30.0); Generated models can be downloaded via icon.
  • Score(NES): how many passes for the criteria: i) not located in the ordered region, ii) do not have beta strand in the middle, and iii) Strong, Medium, or Weak Ebind scores
  • Cosmic: if the key hydrophobic residues are mapped to the COSMIC mutation position, flagged with "cosmic_phi"; when the changed amino acid of the mutation position is L, I, V, M, or F, flagged with "cosmic_phi_to_LIVMF"; if the spacer residues are mapped to the mutation position, flagged with "cosmic_spacer"
  • Score(Cosmic): 2 stars with "cosmic_phi" and the changed amino acid is not L, I, V, M, or F; 1 star for "cosmic_phi_to_LIVMF" or "cosmic_spacer" (Score(Cosmic) is present for only segments with the 3 stars of Score(NES))
  • TOTALscore: Score(NES)+Score(Cosmic); The Ebind category (Strong, Medium, or Weak) is annotated together.