Homologous cluster 'alpha/beta knot' representative domains
Cluster description:
Domains from this cluster contain two RLM motifs, one of which represents unique stuctural feature - alpha/beta know (PMID: 12596263, PMID: 11763972)
| ECOD repr domain ID | Domain range | ECOD T-group | ECOD F-group ID | Protein name | Homology sign logo | Pfam seed alignment depth | Pfam | Comments |
|---|---|---|---|---|---|---|---|---|
| e1ualA1 | A:-1-250 | alpha/beta knot | 2488.1.1.10 | tRNA (Guanine-N(1)-)-methyltransferase | n/a | 15 | PF01746 | |
| e1v6zA2 | A:67-228 | alpha/beta knot | 2488.1.1.11 | hypothetical protein TTHA0657 | n/a | 86 | PF04452 | |
| e1k3rA2 | A:1-92,A:164-262 | alpha/beta knot | 2488.1.1.12 | Methyltransferase | n/a | 155 | PF02598 | |
| e5c74A1 | A:1-211 | alpha/beta knot | 2488.1.1.14 | Arginine N-methyltransferase SFM1 | n/a | 93 | PF04252 | |
| e2qmmA1 | A:95-288 | alpha/beta knot | 2488.1.1.3 | tRNA (pseudouridine(54)-N(1))-methyltransferase | n/a | 5 | PF04013 | |
| e5ap8B1 | B:1-166 | alpha/beta knot | 2488.1.1.39 | SAM-dependent rRNA:acp-transferase Tsr3 | n/a | 178 | PF04034 | |
| e4fmwA1 | A:94-275 | alpha/beta knot | 2488.1.1.40 | RNA (guanine-9-) methyltransferase | n/a | 15 | PF01746 | |
| e3dcmX1 | X:1-188 | alpha/beta knot | 2488.1.1.5 | RNA-methyltransferase | n/a | 81 | PF09936 | |
| e1to0A1 | A:1-157 | alpha/beta knot | 2488.1.1.6 | RNA-methyltransferase | n/a | 592 | PF02590 | |
| e1v2xA1 | A:1-191 | alpha/beta knot | 2488.1.1.7 | tRNA (Gm18) methyltransferase | n/a | 117 | PF00588 | |
| e2o3aA1 | A:1-167 | alpha/beta knot | 2488.1.1.9 | tRNA (cytidine(56)-2'-O)-methyltransferase | n/a | 83 | PF01994 | |
| e2v3kA1 | A:25-251 | alpha/beta knot | 2488.1.1.1 | Methyltransferase | n/a | 119 | PF03587 |