ECOD: domain e1v6zA2

Domain ID e1v6zA2

A: a/b three-layered sandwiches
X: alpha/beta knot
H: alpha/beta knot
T: alpha/beta knot
F: Methyltrans_RNA

UID:	000010988
Type:	Manual and representative domain
Range:	A:67-228
PDB:	1v6z
PDB Description:	hypothetical protein TTHA0657
UniProt:	Q5SKI6
Species:

Domains in the same chain:

Download Pymol

e1v6zA1	A:4-66	cradle loop barrel	RIFT-related	PUA domain
e1v6zA2	A:67-228	alpha/beta knot	alpha/beta knot	alpha/beta knot

Domains in the same PDB:

e1v6zA1	A:4-66	cradle loop barrel	RIFT-related	PUA domain
e1v6zA2	A:67-228	alpha/beta knot	alpha/beta knot	alpha/beta knot
e1v6zB1	B:4-66	cradle loop barrel	RIFT-related	PUA domain
e1v6zB2	B:67-228	alpha/beta knot	alpha/beta knot	alpha/beta knot

Structural contacts of domain e1v6zA2 of H-group "alpha/beta knot":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1v6zB2	A:X,Y,Z->B:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1v6zB1	A:X,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1v6zB1	A:x,y,z->B:X-1,Y,Z	RIFT-related	Interaction Interface Pymol
e1v6zA2	A:x,y,z->A:-X+2,Y-1/2,-Z+3	alpha/beta knot	Interaction Interface Pymol
e1v6zA2	A:-X+2,Y-1/2,-Z+3->A:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1v6zB1	A:-X+3,Y-1/2,-Z+3->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1v6zA1	A:-X+1,Y-1/2,-Z+2->A:x,y,z	RIFT-related	Interaction Interface Pymol
e1v6zA1	A:X-1,Y,Z-1->A:x,y,z	RIFT-related	Interaction Interface Pymol
e1v6zB2	A:X-1,Y,Z-1->B:x,y,z	alpha/beta knot	Interaction Interface Pymol
e1v6zB2	A:-X+2,Y-1/2,-Z+3->B:x,y,z	alpha/beta knot	Interaction Interface Pymol