P25550_F1_nD1

Source: AFDB

Range: 6-400

Length: 395 residues

3D structure (AFDB)

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Sequence

   1PTRAFHVMAK PSGSDCNLNC DYCFYLEKQS LYREKPVTHM DDDTLEAYVR HYIAASEPQN
  61EVAFTWQGGE PTLLGLAFYR RAVALQAKYG AGRKISNSFQ TNGVLLDDEW CAFLAEHHFL
 121VGLSLDGPPE IHNQYRVTKG GRPTHKLVMR ALTLLQKHHV DYNVLVCVNR TSAQQPLQVY
 181DFLCDAGVEF IQFIPVVERL ADETTARDGL KLHAPGDIQG ELTEWSVRPE EFGEFLVAIF
 241DHWIKRDVGK IFVMNIEWAF ANFVGAPGAV CHHQPTCGRS VIVEHNGDVY ACDHYVYPQY
 301RLGNMHQQTI AEMIDSPQQQ AFGEDKFKQL PAQCRSCNVL KACWGGCPKH RFMLDASGKP
 361GLNYLCAGYQ RYFRHLPPYL KAMADLLAHG RPASD

DisulfideMetal-bindingFree thiolClick any cysteine to focus it in the 3D viewer

Position	P(Neg)	P(Dis)	P(Met)	Classification
16	0.001	0.026	0.973	Metal-binding
20	0.001	0.017	0.982	Metal-binding
23	0.002	0.011	0.987	Metal-binding
111	0.990	0.006	0.004	Free thiol
167	0.987	0.009	0.004	Free thiol
184	0.997	0.001	0.001	Free thiol
271	0.159	0.108	0.733	Free thiol
277	0.039	0.395	0.566	Free thiol
292	0.013	0.006	0.981	Metal-binding
334	0.024	0.047	0.929	Metal-binding
337	0.113	0.006	0.881	Metal-binding
343	0.118	0.000	0.882	Metal-binding
347	0.017	0.004	0.978	Metal-binding
366	0.006	0.244	0.750	Free thiol

Neg Dis Met

Classification Summary

Total Cysteines14

Disulfide0

Metal-binding8

Free thiol6

Cite this domain

Per-cysteine three-state classification for ECOD domain P25550_F1_nD1 from TriCyp (Classification of cysteine fates in structure predictions using a protein language model; Yuan, Durham, Cong, Schaeffer, 2026) — preprint URL pending.

ECOD Hierarchy

X-group: 2002

H-group: 2002.1

T-group: 2002.1.1

F-group: 2002.1.1.125