e8kdbA01

Source: PDB

PDB: 8KDB chain A

Range: A:255-436,A:509-513,A:555-555,A:665-676,A:736-737,A:805-812,A:820-822,A:915-916,A:928-930,A:998-999,A:1111-1116,A:1130-1131,A:1171-1175,A:1192-1197,A:1209-1209,A:1213-1213,A:1225-1230,A:1249-1256,A:1293-1296,A:1307-1307

Length: 260 residues

3D structure (PDB)

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Sequence

   1LITPELVLMY CDVVEGRWNI SACAKLDPKL QSMYQKGNNL WEVIDKLFPI MGEKTFDVIS
  61LLEPLALSLI QTHDPVKQLR GAFLNHVLSE MELIFESGES IREFLSVDYI DKILDIFNES
 121TIDEIAEIFS FFRTFGHPPL EASIAAEKVR KYMYIEKQLK FDTVNKCHAI FCTIIINGYR
 181ERWDTVYWKF EFKSTDIYND YCTTRVPNNY IVYACALGLD IRVGINNYIH LSGSGVVITD
 241PIGSAETEAQ LGYIKRANFV

DisulfideMetal-bindingFree thiolClick any cysteine to focus it in the 3D viewer

Position	P(Neg)	P(Dis)	P(Met)	Classification
11	0.942	0.042	0.016	Free thiol
23	0.783	0.168	0.048	Free thiol
167	0.875	0.043	0.081	Free thiol
172	0.941	0.038	0.022	Free thiol
202	0.769	0.059	0.172	Free thiol
215	0.928	0.053	0.019	Free thiol

Neg Dis Met

Classification Summary

Total Cysteines6

Disulfide0

Metal-binding0

Free thiol6

Cite this domain

Per-cysteine three-state classification for ECOD domain e8kdbA01 from TriCyp (Classification of cysteine fates in structure predictions using a protein language model; Yuan, Durham, Cong, Schaeffer, 2026) — preprint URL pending.

ECOD Hierarchy

X-group: 4963

H-group: 4963.1

T-group: 4963.1.2

F-group: 4963.1.2.1