TriCyp
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TriCyp

Three-state cysteine classification across ECOD F70 representative domains — disulfide-bonded, metal-binding, or free thiol — combining ESM2 predictions with PDB structural evidence.

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© 2026 Schaeffer & Cong Labs, UT Southwestern Medical Center

data · paper-v1·refreshed 2026-09-21

Dashboard/Browse Families

ECOD Families

6,222 families with Archaea F70 representatives

Kingdom: Archaea✕

Showing 1–50 of 6,222 families

F-GroupNameX-GroupDomainsTotal CysDisulfideMetal ▼Free thiol
2002.1.1.120Radical_SAMTIM beta/alpha-barrel13071052126559364320
2007.1.5.2CCGFlavodoxin-like5303009617651238
375.1.1.0375.1.1.0Rubredoxin-like101942644217212501
7574.1.1.5TPP_enzyme_CThiamin diphosphate-binding fold (THDP-binding)30515474795748
2002.1.1.02002.1.1.0TIM beta/alpha-barrel44621431086301405
2004.1.1.5ABC_tranP-loop domains-like120830011045332364
236.1.1.1ADH_NGroES-like1226270499128
2007.1.3.3Oxidored_q6Flavodoxin-like1528452498345
2005.1.1.11ATP_bind_3HUP domain-like936596480173
2005.1.1.1tRNA-synt_1HUP domain-like1699753465507
102.1.2.1HhH-GPDHhH/H2TH13462412349263
2007.2.1.3FMN_redFlavodoxin-like1115552347206
2484.1.1.302Cas12f1-like_TNBRibonuclease H-like864526319127
2007.22.1.1FlpDFlavodoxin-like874460316130
375.1.1.37TF_Zn_RibbonRubredoxin-like90367030859
376.1.1.0376.1.1.0RING/U-box-like56372029379
375.1.4.1PyrI_CRubredoxin-like7329702925
2003.1.9.1ThiFRossmann-like845323282247
2003.1.2.02003.1.2.0Rossmann-like223102830278720
3740.1.1.4FrhB_FdhB_CF420-reducing hydrogenase subunit beta936283273352
2.1.1.02.1.1.0OB-fold41783573268494
2005.1.1.02005.1.1.0HUP domain-like17572812263453
375.1.1.26Rpr2Rubredoxin-like66301025942
2492.1.1.1dCMP_cyt_deam_1Cytidine deaminase-like673952258135
873.1.1.0873.1.1.0H-NOX domain19179530256509
873.1.1.1V4RH-NOX domain1035015254242
2005.1.1.27QueCHUP domain-like684016251144
2004.1.1.02004.1.1.0P-loop domains-like8112130792441807
377.1.1.0377.1.1.0Glucocorticoid receptor-like913793238138
221.1.1.1Fer2beta-Grasp57250022822
2002.1.1.73TGTTIM beta/alpha-barrel804261226199
169.1.1.1AFOR_CAldehyde ferredoxin oxidoreductase-C805611222338
2002.1.1.414Wyosine_formTIM beta/alpha-barrel534180214204
301.1.1.2eRF1_3Bacillus chorismate mutase-like83267521448
314.1.1.2tRNA-synt_2bClass II aaRS and biotin synthetases2017812211568
7542.1.1.1AconitaseAconitase iron-sulfur domain1545330209324
375.1.1.9zf-C4_TopoisomRubredoxin-like47242520433
361.1.1.1DnaJ_CXXCXGXGDnaJ/Hsp40 cysteine-rich domain423151204110
7569.1.1.1UDGUracil-DNA glycosylase-like58280619777
7514.1.1.8DHODB_Fe-S_bindFerredoxin reductase-like, C-terminal NADP-linked domain523321196135
375.1.1.7TFIIS_CRubredoxin-like54216019422
2004.1.1.144DEAD_2P-loop domains-like5335311190152
2498.1.1.35Peptidase_M54Zincin-like482501418947
376.1.3.0376.1.3.0RING/U-box-like33272118784
2005.1.1.5tRNA-synt_1cHUP domain-like60253218467
321.1.1.4GatB_NGlutamine synthetase-like7939328183182
2005.1.1.2tRNA-synt_1bHUP domain-like1445997182410
2005.1.1.14PAPS_reductHUP domain-like553036181116
101.1.2.0101.1.2.0HTH123419991441761679
375.1.1.64RUBY_RBDXRubredoxin-like47199317323
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