TriCyp
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TriCyp

Three-state cysteine classification across ECOD F70 representative domains — disulfide-bonded, metal-binding, or free thiol — combining ESM2 predictions with PDB structural evidence.

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© 2026 Schaeffer & Cong Labs, UT Southwestern Medical Center

data · paper-v1·refreshed 2026-09-21

Dashboard/Browse Families

ECOD Families

9,654 families with Bacteria F70 representatives

Kingdom: Bacteria✕

Showing 1–50 of 9,654 families

F-GroupNameX-GroupDomainsTotal CysDisulfideMetal ▼Free thiol
2002.1.1.120Radical_SAMTIM beta/alpha-barrel5423255217391514
375.1.1.0375.1.1.0Rubredoxin-like418162612685929
361.1.1.1DnaJ_CXXCXGXGDnaJ/Hsp40 cysteine-rich domain13010130674339
236.1.1.1ADH_NGroES-like1819121619292
221.1.1.1Fer2beta-Grasp1417430561182
2005.1.1.27QueCHUP domain-like1278770508369
2007.1.3.2UPF0004Flavodoxin-like2408460502344
102.1.1.79DNA_ligase_ZBD+HHH_2+HHH_5HhH/H2TH124533249041
2002.1.1.122Radical_SAM,BATSTIM beta/alpha-barrel159149218487987
2002.1.1.02002.1.1.0TIM beta/alpha-barrel4672092434621587
377.2.1.1zf-FPG_IleRSGlucocorticoid receptor-like116474045816
2004.1.1.02004.1.1.0P-loop domains-like697232044421874
2002.1.1.121Radical_SAM,Mob_synth_CTIM beta/alpha-barrel755530442111
2005.1.1.12tRNA-synt_1eHUP domain-like2228440389455
377.1.3.1zf-FPG_IleRSGlucocorticoid receptor-like119480038199
102.1.1.10DNA_ligase_ZBD,HHH_2HhH/H2TH94428037553
377.1.1.11RecO_CGlucocorticoid receptor-like1866590325334
2005.1.1.23tRNA_Me_transHUP domain-like1537584318436
2005.1.1.5tRNA-synt_1cHUP domain-like1846550315340
314.1.1.9tRNA-synt_HisClass II aaRS and biotin synthetases26310871303783
375.1.1.67NrdR-like_NRubredoxin-like7530603006
2005.1.1.02005.1.1.0HUP domain-like26410670299768
2003.1.5.53tRNA_U5-meth_trRossmann-like1379621271690
2007.1.3.3Oxidored_q6Flavodoxin-like733810270111
314.1.1.2tRNA-synt_2bClass II aaRS and biotin synthetases337146402651199
2005.1.1.40tRNA-synt_1+tRNA-synt_1gHUP domain-like1888551242612
149.1.1.1p450Cytochrome P4502437881239548
7542.1.1.1AconitaseAconitase iron-sulfur domain1465060238268
2005.1.1.1tRNA-synt_1HUP domain-like26310790226853
2002.1.1.73TGTTIM beta/alpha-barrel745180217301
2002.1.1.125Radical_SAM,SPASMTIM beta/alpha-barrel283603215142
4203.1.1.1HSP33HSP33 redox switch-like943460212134
213.1.1.62ATE_N+ATE_CNat/Ivy52289020782
2007.1.5.2CCGFlavodoxin-like52273020172
2486.1.1.02486.1.1.0ClpP/crotonase833792197180
2492.1.1.1dCMP_cyt_deam_1Cytidine deaminase-like843650195170
4303.1.1.1ILVD_EDDlvD/EDD N-terminal domain-like796230188435
309.1.2.1tRNA_SADLuxS, MPP, ThrRS/AlaRS common domain2764540187267
377.1.1.17zf-C4_ClpXGlucocorticoid receptor-like47218018632
314.1.1.3tRNA-synt_2dClass II aaRS and biotin synthetases873690184185
2004.1.1.422MMR_HSR1, RsgA_GTPaseP-loop domains-like66275018392
375.1.1.46tRNA-synt_1gRubredoxin-like51238017662
289.1.1.1Pep_deformylasePeptide deformylase1733780169209
102.1.1.96HHH, DNA_ligase_ZBD, HHH_2, HHH_5HhH/H2TH4217301685
4232.1.1.1Ribosomal_L28Ribosomal protein bL28-related104241015883
2484.1.1.8ROKRibonuclease H-like1193720158214
2002.1.1.127Radical_SAM,LIAS_NTIM beta/alpha-barrel433210157164
2003.1.5.17Methyltransf_5Rossmann-like2005252156367
377.1.1.2Ribosomal_S14Glucocorticoid receptor-like101246015690
4246.1.1.2RNA_pol_Rpb1_1N-terminal domain in RNA-polymerase beta-prime subunit623252153170
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