TriCyp
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TriCyp

Three-state cysteine classification across ECOD F70 representative domains — disulfide-bonded, metal-binding, or free thiol — combining ESM2 predictions with PDB structural evidence.

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© 2026 Schaeffer & Cong Labs, UT Southwestern Medical Center

data · paper-v1·refreshed 2026-09-21

Dashboard/Browse Families

ECOD Families

1,145 families with Viruses F70 representatives

Kingdom: Viruses✕

Showing 1–50 of 1,145 families

F-GroupNameX-GroupDomainsTotal CysDisulfideMetal ▼Free thiol
396.1.1.1zf-CCHCCCHC-type 1 zinc finger8270225
219.1.1.43CoV_peptidaseCysteine proteinases-like88122158
376.1.1.7zf-P11RING/U-box-like3220202
4962.1.1.14962.1.1.1C-terminal additional helical subdomain in reovirus polymerase lambda3127941560
225.3.1.1Herpes_UL31ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like54201230
4246.1.1.2RNA_pol_Rpb1_1N-terminal domain in RNA-polymerase beta-prime subunit2170107
101.1.1.14Integrase_ZnHTH6130103
906.1.1.1zf-CCCHCCCH zinc finger39090
376.1.3.22STL11_NRING/U-box-like19081
376.1.1.36CoV_NSP13_ZBDRING/U-box-like213085
376.1.1.1zf-C3HC4RING/U-box-like17070
376.1.1.0376.1.1.0RING/U-box-like210073
2484.1.1.52CoV_ExoNRibonuclease H-like2232714
2492.1.1.1dCMP_cyt_deam_1Cytidine deaminase-like3200713
376.1.1.19RINGvRING/U-box-like17070
376.1.1.34zf-RING_13RING/U-box-like19063
304.48.1.9RdRP_1,CoV_RPol_NAlpha-beta plaits3860680
11.1.1.19Alpha_E2_glycopImmunoglobulin-like beta-sandwich168435643
2004.1.1.55RNA_helicaseP-loop domains-like6430538
4136.1.1.1CoV_NSP10Coronavirus NSP10-like2231355
3829.1.1.1Flavi_NS1Flavivirus non-structural protein 1 (NS1) beta-meander domain4320527
378.1.1.2HNHHis-Me finger endonucleases14040
378.1.1.3Endonuclease_7His-Me finger endonucleases14040
856.1.1.2Capsid_VP7Outer capsid protein sigma 3-related112048
375.8.1.1eIF-5_eIF-2BRubredoxin-like15041
3828.1.1.1Flavi_NS1Flavivirus non-structural protein 1 (NS1) a/b domain10546444
7046.1.1.07046.1.1.0RNAi suppressor protein CrPV-1A17043
219.1.1.33219.1.1.33Cysteine proteinases-like110046
221.1.1.1Fer2beta-Grasp16042
2500.1.1.7Gly_radical, NRDDTen stranded beta/alpha barrel113049
386.1.1.26zf-C2H2_6beta-beta-alpha zinc fingers24040
285.1.1.1Amidase_2N-acetylmuramoyl-L-alanine amidase-like412246
4967.1.1.14Flavi_NS5_thumbhelical bundle domain in reverse transcriptase-like polymerases9300426
386.1.1.0386.1.1.0beta-beta-alpha zinc fingers24040
378.1.1.12RecA_dep_nucHis-Me finger endonucleases14031
906.1.1.37zf-CCCH_RBM22CCCH zinc finger13030
375.1.1.0375.1.1.0Rubredoxin-like14031
906.1.1.4Pneumovirus_M2CCCH zinc finger13030
4987.1.1.1Ribosomal_L31Ribosomal protein L31p15032
396.1.1.4zf-CCHC_5CCHC-type 1 zinc finger13030
856.1.1.0856.1.1.0Outer capsid protein sigma 3-related17034
2006.1.4.02006.1.4.0HAD domain-like212039
4255.1.1.1E6E6 C-terminal domain-like14031
4963.1.2.1Mononeg_RNA_polN-terminal additional helical subdomain in reovirus polymerase lambda314851381
2003.1.5.57CoV_ExoNRossmann-like2221138
3174.3.1.1PAAR_motifRibosomal protein L14-like34031
4238.1.1.1VP_N-CPKCViral leader polypeptide zinc finger26033
856.1.1.1Reovirus_capOuter capsid protein sigma 3-related16033
375.9.1.1Zf-Nsp1alphaRubredoxin-like14022
375.1.1.39Prim_Zn_RibbonRubredoxin-like28026
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