P05455 LA_HUMAN
Gene name: SSB
Protein name: Lupus La protein
List of terms from Generic GO subset, which this protein is a part of:
- biological process involved in symbiotic interaction GO:0044403
- catabolic process GO:0009056
- cellular nitrogen compound metabolic process GO:0034641
- nucleobase-containing compound catabolic process GO:0034655
- nucleocytoplasmic transport GO:0006913
- protein transport GO:0015031
- transport GO:0006810
Table: Top 10 the most similar proteins, based on disordered regions enriched in particular amino acids. Cosine similarity calculation is described here. The whole list can be downloaded at the Download page
# | UniProt Accession | Gene Name | Cosine Similarity | Generic GO terms |
---|---|---|---|---|
1 | Q9UQ13 | SHOC2 | 0.8123 |
signal transduction
GO:0007165 |
2 | Q9Y2S6 | TMA7 | 0.78934 |
biosynthetic process
GO:0009058 cellular nitrogen compound metabolic process GO:0034641 translation GO:0006412 |
3 | O95995 | GAS8 | 0.78769 |
anatomical structure development
GO:0048856 cell population proliferation GO:0008283 cellular component assembly GO:0022607 ... |
4 | Q1ED39 | KNOP1 | 0.78305 | |
5 | A6NIV6 | LRRIQ4 | 0.78072 | |
6 | Q9Y421 | FAM32A | 0.76996 |
cell cycle
GO:0007049 cell death GO:0008219 |
7 | Q86XH1 | IQCA1 | 0.76903 | |
8 | Q9H098 | FAM107B | 0.7683 | |
9 | H3BMG3 | SMKR1 | 0.76519 | |
10 | O75367 | MACROH2A1 | 0.76383 |
anatomical structure development
GO:0048856 anatomical structure formation involved in morphogenesis GO:0048646 biosynthetic process GO:0009058 ... |
20 40 60 80 100
AA: MAENGDNEKMAALEAKICHQIEYYFGDFNLPRDKFLKEQIKLDEGWVPLEIMIKFNRLNRLTTDFNVIVEALSKSKAELMEISEDKTKIRRSPSKPLPEV
STMI:
DO_DISOPRED3: DDDDDDDDD...........................................................................................
DO_IUPRED2A: DDDDDD...............................................................................D...DDDDDDDD..D
DO_SPOTD: DDDDDDDD............................................................................................
CONSENSUS: DDDDDDDD............................................................................................
CONSENSUS_MOBI: ....................................................................................................
120 140 160 180 200
AA: TDEYKNDVKNRSVYIKGFPTDATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETPGQKYKETDLLILFKDDYFAKKNEERKQNK
STMI:
DO_DISOPRED3: ....................................................................................................
DO_IUPRED2A: DDD................................................................................................D
DO_SPOTD: ..............................................................................................DDDDDD
CONSENSUS: ...................................................................................................D
CONSENSUS_MOBI: ....................................................................................................
RICH_[K]: K
RICH_[EK]: K
220 240 260 280 300
AA: VEAKLRAKQEQEAKQKLEEDAEMKSLEEKIGCLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDANNGNLQLRNKE
STMI:
DO_DISOPRED3: ......DDDDDDDDDDDDDDDDDDDDD.........................................................................
DO_IUPRED2A: DDDDDD.DD..DDDDDDDD.................................................................DDDDDDDDDDD..DD.
DO_SPOTD: DDDDDDDDDDDDDDDDDDDDDDDDDD..........................................................................
CONSENSUS: DDDDDDDDDDDDDDDDDDDDDDDDDD..........................................................................
CONSENSUS_MOBI: ....................................................................................................
RICH_[AE]: EAklrAkqEqEAkqklEEdAE
RICH_[AK]: AKlrAKqeqeAKqKleedA
RICH_[E]: EqEakqklEEdaE
RICH_[K]: veaKlraKqeqeaKqKleedaemK
RICH_[EK]: vEaKlraKqEqEaKqKlEEdaEmK
RICH_[EQ]: QEQEakQklEEdaE
320 340 360 380 400
AA: VTWEVLEGEVEKEALKKIIEDQQESLNKWKSKGRRFKGKGKGNKAAQPGSGKGKVQFQGKKTKFASDDEHDEHDENGATGPVKRAREETDKEEPASKQQK
STMI:
DO_DISOPRED3: .........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A: ................DD..........DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD: .......................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS: .........................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
CONSENSUS_MOBI: ..................................DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
RICH_[G]: GrrfkGkGkGnkaaqpGsGkG
RICH_[K]: KwKsKgrrfKgKgKgnKaaqpgsgKgKvqfqgKKtK KrareetdKeepasKqqK
RICH_[DF]: FqgkktkFasDDehD
RICH_[EK]: KrarEEtdKEEpasKqqK
RICH_[FK]: KgKvqFqgKKtKF
RICH_[GK]: KwKsKGrrfKGKGKGnKaaqpGsGKGKvqfqGKKtK
RICH_fLPS_[D]: asDDehDehD
RICH_fLPS_[G]: GkGkGnkaaqpGsGkG
RICH_fLPS_[K]: KwKsKgrrfKgKgKgnKaaqpgsgKgKvqfqgKKtK
RICH_fLPS_[KG]: KwKsKGrrfKGKGKGnKaaqpGsGKGK
RICH_MOBI_[G]: GkGkGnkaaqpGsGkG
RICH_MOBI_[K]: KgKgKgnKaaqpgsgKgKvqfqgKKtK KrareetdKeepasKqqK
RICH_MOBI_[DF]: FqgkktkFasDDehDehD
RICH_MOBI_[EK]: KrarEEtdKEEpasKqqK
RICH_MOBI_[FG]: GsGkGkvqFqGkktkF
RICH_MOBI_[FK]: KgKvqFqgKKtKF
RICH_MOBI_[GK]: KGKGKGnKaaqpGsGKGKvqfqGKKtK
RICH_fLPS_MOBI_[K]: KgKgKgnKaaqpgsgKgKvqfqgKKtK
AA: TENGAGDQ
STMI:
DO_DISOPRED3: DDDDDDDD
DO_IUPRED2A: DDDDDDDD
DO_SPOTD: DDDDDDDD
CONSENSUS: DDDDDDDD
CONSENSUS_MOBI: DDDDDDDD
RICH_[EK]: tE
RICH_MOBI_[EK]: tE