Citrus Sinensis ID: 000072

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770------1780------1790------1800------1810------1820------1830------1840------1850------1860------1870------1880------1890------1900------1910------1920------1930------1940------1950------1960------1970------1980------1990------2000------2010------2020------2030------2040------2050------2060------2070------2080------2090------2100------2110------2120------2130------2140------2150------2160------2170------2180------2190------2200------2210------2220------2230------2240------2250------2260------2270------2280------2290------2300------2310------2320------2330------2340------2350------2360------2370------2380------2390------2400------2410------2420-----

MLRLSSTVPSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLESDGASNPAAHQHVSSQATSGNGEVSGSGITQLGQQLSSQIQLQQRSESVVDDRHKVSAASSSDMKPLLSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKVRILEPGASSQSLPSTAAPERIGSSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSHTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSMVSGWVPDNTH

cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccHHHHHHccccccccccccccccHHHHHHHHHHHcccccHHHHHHHccccccccccHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHcHHHHHHHHHHHHccccHHHHHHHHHcHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccEEEEEEHHHHHccccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccHHccccccccccHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccccccccccHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHcccHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccc

cccccHHHHHHHHHHHHHccHHcHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccEEEccccccccccccHHHHHHHccccccccHHHHHHHHcccccHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHccccccHHHHHHHHHHHHHcccccccccccccccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccccHHHEEHEHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccHccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHcccEEEEEcHHHHHHHHHccccEcccccHHHHHHHHHHHHHHHcccccEEEEEEEHHHHHHccccHHcccccHHHcccHHHHccccccccccccccccccccccccccccccccccccHHHccccccccccHHHHHccccccccccccccccccccccccccccccccHccccccccccccHHHHHcccccccEEEEcccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccHcccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccHccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccccccHHcccccccccccccccccccccccccccccccHcHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccHHHHccccccccccHHHHccccHHHHHHHHHHcccccHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccccccccHHHccHHHHHHHHHHHHHHcccccccccccccccccccc

mlrlsstvPSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLnlhgtglknpqlESVVASVFKYimdkpnfstvfSQSVKITEINEQLLENLSDVLnlslperigiglalsdsenldalmcgkNFCMAQIERlcanpvpmnsaEQIQNIIMFLQRSSDLSKHVDSLMQILSLLqskdhtqfvlnpvlpdelhdatslrdldlfhecrdddFDDILAEMEKEMSMGDVmnelgygcsadasQCKEILSLFTPLTEITLSRILGAIARThaglednqntfSTFTLALgcstmsdlpplsswnVDVLVKAIKQlapntnwiRVVENldyegfyiptEEAFSFFMSVYKYacqepfplhavcgsvwknteGQLSFLRYavasppevftfahsarqlpyvdavpglklqsgqanhAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHvnpnivlrgfvdaqnmepdCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVqfgrsqdfsaqpfhhsgaLLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLdstprlqngeaadsstsegyaDDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGnlfeeyrffpkypeRQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDAlrkpadskmfVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARISsghlesdgasnpaahqhvssqatsgngevsgsgiTQLGQQLSSQIQLQqrsesvvddrhkvsaasssdmkpllssigqpssvaplgdtssaqKLHNavsapamlsissgfarpsrgvtstkfgsALNIETLVAAAERretpieapasevQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFtskilepcqsslayqppnpwTMAILGLLAEIysmpnlkmnLKFDIEVLFKNlgvdmkditptsllkdrkreiegnpdfsnkdvgasqpqlvpevkpaivsplghvdlpldvasppnsggpthllsqyaaplrlssgtlmedeKLAALgisdqlpsaqglfqasqsqspfsvsqlstpipnigthvIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSlahvtckeplrgsiSSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRkhregvgssffdpniyaqgsmgvpealrpkpghlsvsqQRVYEdfvrlpwqnqssqgshamsagsltssgdaaqasayglaggqgnqgysssagstgfdavsrpsdvasgttestsagflSTSLVHigaadggilhnsesesvnaaftpaatelyaadstepvkvrilepgassqslpstaaperigssilepslqtrdaLDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYenasnnlhFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLaakpgspesLQQLIEIVRnpaananassgattakddkarqskdkkayshttanredynipesvdpdpvgfpeQVSMLFAEWYQicelpgsndaACTRYVLQLHqngllkgddmTDRFFRRLTEVSVAHClssevinpgtlqspqqsqsLSFLAIDIYAKLMLSILKccpveqgsskiFLLSKILTVTVKFILKDAeekkasfnprpyFRLFINWLldmssldpvadgsnfQILSAFANAFHvlqplkvpaFSFAWLELVShrsfmpklligngqkgwPYIQRLLVNLLQFLEPFlrnaelgvpvrfLYKGTLRVLLVLLHdfpeflcdyhftfcdvippsciQMRNIILsafprnmrlpdpstpnlkidllpeirdpprifSEVDAALRAKQMRADVDdylktgqpgssfLSELKQklllppseaasagtrynvplINSLVLYVGMQAIHQLQTRtshaqstgnnsSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAAnqlrypnnhthYFSFVLLYLYAEANQEIIQEQITRVLFERLivnrphpwgLLITFIELiknprynfwnqsfiRCAPEIEKLFESVArscgglkpvddsmvsgwvpdnth

mlrlsstvpsQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMSDLPPLSSWNVDVLVKAIKqlapntnwirVVENLDYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVvldstprlqngeaadsstseGYADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLESDGASNPAAHQHVSSQATSGNGEVSGSGITQLGQQLSSQIQLQQRSESVVDDRHKVSaasssdmkpllSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGvtstkfgsalNIETLVAAAERRETPieapasevqdkISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKnlgswlgkltigrnqvlrareidpkSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNlgvdmkditptsllkdrkreiegnpdfsnkdvgASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSgivqrsvsiatqttkelvlKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKVRILepgassqslpstaaperigsSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTswviysdeerkfnrdITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIEIVRNPAananassgattakddkarqskdkkayshttanredynipesVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDaeekkasfnprpYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKidllpeirdppRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGglkpvddsmvsgwvpdnth

MLRLSSTVPSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWlcldlldvlcqlSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLESDGASNPAAHQHVSSQATSGNGEVsgsgitqlgqqlssqiqlqqRSESVVDDRHKVSAASSSDMKPLLSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSSQGSHAMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKVRILEPGASSQSLPSTAAPERIGSSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIEIVRNPaananassgattaKDDKARQSKDKKAYSHTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEVINPGTlqspqqsqslsFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSMVSGWVPDNTH

***********IRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVL***************************ANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARI***************************************************************************************************************************GSALNIETLVA***************VQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIK******SLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDIT********************************************************************************************************************PIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSL********GSSFFDPNIYA***********************VYEDFVRLPW********************************************************************FLSTSLVHIGAADGGIL***************************************************************DALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLA*******************************************************************GFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEVIN************LSFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRN************IDLL********IF***********************************************GTRYNVPLINSLVLYVGMQAIHQLQT************SLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPV**************

****SSTVPSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGT**KNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQ*************QILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECR***************SMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAG**D****FSTFTLAL**********LSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLP*************QANHAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVK***************************KIPVILKLLKAH************IEKFQAVVLDSTPRLQN*****************AEANSYFHQMFSGQLTIEAMVQM**************IFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIER***********************************************************************************************************************************LNIETLVAAAER**********EVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKS*SEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKD***********************************************************************************************************STPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLR***************AVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLS*************FDPNIYAQGSMGVP**************QRVYEDFV************************************************************************************************************************************************LEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPG***************************************************************GFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCL******************LSFLAIDIYAKLMLSILKCCP**Q*SSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPST**********IRDPPRIFSEVDAALRAKQMRADVDDYLKTGQP***********************TRYNVPLINSLVLYVGMQAIH***********************SAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVA***********************

********PSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQ***********GYADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARISSG****************************GSGITQLG**********************************LSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGISDQLPSAQGLF**************STPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLPWQN*******************AAQASAYGLAGGQ*******************************SAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKVRILEPG************ERIGSSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIEIVRNPAAN****************************ANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQ************NNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSMVSGWVPDNTH

*LRLSSTVPSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQEPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFAVFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQ************LLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSSTSEGYADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARI****************************************************************************************************************************SALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR***********************************************************************************************QSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREGVGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQRVYEDFVRLP***********************************************************************************************************************************A*P*RIGSSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALAKLAAKPGSPESLQQLIEIVRNPAA****************************************VDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEV*********QQSQSLSFLAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTS*********SLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGL*****************

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		2425	2.2.26 [Sep-21-2011]
A5YKK6		2376	CCR4-NOT transcription co	yes	no	0.298	0.304	0.437	1e-172
Q6ZQ08		2375	CCR4-NOT transcription co	yes	no	0.298	0.304	0.436	1e-172
A0JP85		2388	CCR4-NOT transcription co	yes	no	0.285	0.289	0.447	1e-172
A1A5H6		2374	CCR4-NOT transcription co	yes	no	0.299	0.305	0.434	1e-171
P87112		2100	General negative regulato	yes	no	0.265	0.306	0.300	4e-77
P25655		2108	General negative regulato	yes	no	0.273	0.314	0.262	1e-73
Q8Y5X6		365	3-dehydroquinate synthase	yes	no	0.029	0.197	0.370	0.0001

>sp\|A5YKK6\|CNOT1_HUMAN CCR4-NOT transcription complex subunit 1 OS=Homo sapiens GN=CNOT1 PE=1 SV=2	Back alignment and function desciption

 Score =  609 bits (1570), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 344/786 (43%), Positives = 477/786 (60%), Gaps = 63/786 (8%)

Query: 1657 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNN---- 1711
            Q L A+    A   + Q + S +  ++L   SRD  AAL + QK  +GL +  S      
Sbjct: 1621 QHLHAIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL 1680

Query: 1712 --LHFSAHLAILAAIRD-------VCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELL 1762
               +   HL +L A++D        C    K++T  +I   +E K+N +    LIR+ L+
Sbjct: 1681 LLRYRECHLLVLKALQDGRAYGSPWCN---KQITRCLIECRDEYKYNVEAVELLIRNHLV 1737

Query: 1763 NLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDE---SRVVISELHNLVDALAKLAA- 1818
            N+ +Y++H+A+ ++ G N  A  FA+ L++ L+ DE   + V  ++L + ++ L ++ A 
Sbjct: 1738 NMQQYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAH 1797

Query: 1819 -KPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSHTTANREDYNIPE 1877
             +  +PE L QL+E+VR+             A  D+A    +   +S  +   E Y+   
Sbjct: 1798 SRGNAPEGLPQLMEVVRS----------NYEAMIDRAHGGPNFMMHSGISQASE-YD--- 1843

Query: 1878 SVDPDPVGFPEQVSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFF 1934
                DP G  E+   L  EW   Y        +  A + +V Q+HQ G+LK DD+  RFF
Sbjct: 1844 ----DPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFF 1899

Query: 1935 RRLTEVSVA---HCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLMLSILK-CCPVEQGS 1990
            R  TE+ V       + +  NP    +P   ++  +  +D + +L+  ++K         
Sbjct: 1900 RLCTEMCVEISYRAQAEQQHNPAA--NPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTV 1957

Query: 1991 SKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILS 2050
            +KI LL+K+L + V  +L+D + +++ F   PY R+FI  LL++++ + V +  NFQ L+
Sbjct: 1958 TKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLT 2017

Query: 2051 AFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGN-GQKGWPYIQRLLVNLLQFLEP 2109
            AF N FH+L+P K P F +AWLEL+SHR F+ ++L     QKGWP   +LL++L ++L P
Sbjct: 2018 AFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAP 2077

Query: 2110 FLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFP 2169
            FLRN EL  P++ LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFP
Sbjct: 2078 FLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFP 2137

Query: 2170 RNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSE 2229
            RNMRLPDP TPNLK+D+L EI   PRI +     +   Q + D+D YLKT  P  +FLS+
Sbjct: 2138 RNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVM-PPQFKKDLDSYLKTRSP-VTFLSD 2195

Query: 2230 LKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLV 2289
            L+  L +    +   G RYN+ LIN+LVLYVG QAI       +H  + G+  S++    
Sbjct: 2196 LRSNLQV----SNEPGNRYNLQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITH 2244

Query: 2290 SAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQI 2349
            SA +DIFQ L  DLDTEGRYLFLNA ANQLRYPN+HTHYFS  +LYL+AEAN E IQEQI
Sbjct: 2245 SAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQI 2304

Query: 2350 TRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLK 2409
            TRVL ERLIVNRPHPWGLLITFIELIKNP + FWN  F+ CAPEIEKLF+SVA+ C G K
Sbjct: 2305 TRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLFQSVAQCCMGQK 2364

Query: 2410 PVDDSM 2415
                 M
Sbjct: 2365 QAQQVM 2370

Belongs to the CCR4-NOT complex that functions as general transcription regulation complex. Acts as a transcriptional repressor. Represses the ligand-dependent transcriptional activation by nuclear receptors.
Homo sapiens (taxid: 9606)

>sp\|Q6ZQ08\|CNOT1_MOUSE CCR4-NOT transcription complex subunit 1 OS=Mus musculus GN=Cnot1 PE=1 SV=2	Back alignment and function description

>sp\|A0JP85\|CNOT1_XENTR CCR4-NOT transcription complex subunit 1 OS=Xenopus tropicalis GN=cnot1 PE=2 SV=1	Back alignment and function description

>sp\|A1A5H6\|CNOT1_DANRE CCR4-NOT transcription complex subunit 1 OS=Danio rerio GN=cnot1 PE=2 SV=1	Back alignment and function description

>sp\|P87112\|NOT1_SCHPO General negative regulator of transcription subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=not1 PE=1 SV=1	Back alignment and function description

>sp\|P25655\|NOT1_YEAST General negative regulator of transcription subunit 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC39 PE=1 SV=3	Back alignment and function description

>sp\|Q8Y5X6\|AROB_LISMO 3-dehydroquinate synthase OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) GN=aroB PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		2425
255541160		2330	ccr4-not transcription complex, putative	0.96	0.999	0.740	0.0
449433000		2427	PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT	0.984	0.983	0.725	0.0
356523091		2424	PREDICTED: CCR4-NOT transcription comple	0.985	0.985	0.733	0.0
356504613		2327	PREDICTED: CCR4-NOT transcription comple	0.952	0.992	0.708	0.0
357512789		2410	CCR4-NOT transcription complex subunit [	0.976	0.982	0.699	0.0
357512787		2418	CCR4-NOT transcription complex subunit [	0.976	0.979	0.696	0.0
297734545		2452	unnamed protein product [Vitis vinifera]	0.982	0.971	0.689	0.0
359489261		2333	PREDICTED: CCR4-NOT transcription comple	0.958	0.996	0.670	0.0
297842912		2379	hypothetical protein ARALYDRAFT_887229 [	0.975	0.994	0.652	0.0
334182230		2377	CCR4-NOT transcription complex subunit 1	0.976	0.995	0.654	0.0

>gi\|255541160\|ref\|XP_002511644.1\| ccr4-not transcription complex, putative [Ricinus communis] gi\|223548824\|gb\|EEF50313.1\| ccr4-not transcription complex, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 3671 bits (9519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1797/2427 (74%), Positives = 2034/2427 (83%), Gaps = 99/2427 (4%)

Query: 1    MLRLSSTVPSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGL 60
            M  LSST+ +Q+RFLL SLNE N DSVFRELC+F E G++ S ++LQTC++H+N   T L
Sbjct: 1    MPTLSSTISNQVRFLLHSLNEDNLDSVFRELCKFTENGLDESIVVLQTCLEHVNFQRTDL 60

Query: 61   KNPQLESVVASVFKYIMDKPNFSTVFSQSVKITEINEQLLENLSDVLNLSLPERIGIGLA 120
            KN QL+ V+ S+FK+++D+PNFSTV  QS++ +EI+E+ L+N S+VL+LSL E+I IGLA
Sbjct: 61   KNMQLQPVILSIFKFLLDRPNFSTVLCQSLRSSEISEEFLDNFSNVLHLSLSEKIAIGLA 120

Query: 121  LSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQNIIMFLQRSSDLSKHVDSLMQI 180
            LSDSEN++  M  K FC+AQIE LC+NPV MNSA+QIQNI+MFLQ+S   +KHVD  +Q+
Sbjct: 121  LSDSENIETRMGAKKFCIAQIEELCSNPVSMNSAQQIQNIVMFLQQSEGHTKHVDPFLQM 180

Query: 181  LSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEMSMGDVMN 240
            LSL+Q KD   F L P+L DE+ +A  LR++DLFHEC++++FD +LAEMEKEM+ G+++ 
Sbjct: 181  LSLVQPKDVFPFFLTPLLSDEMREANFLRNMDLFHECQENEFDALLAEMEKEMNAGEIVK 240

Query: 241  ELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCST 300
            ELGYGC+ D+S CKEILS F PLTE T+S+ILG IAR HAGLE+NQ+TFS F LALGCS 
Sbjct: 241  ELGYGCTFDSSHCKEILSNFLPLTESTISKILGTIARNHAGLEENQSTFSNFGLALGCSI 300

Query: 301  MSDLPPLSSWNVDVLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKYACQ 360
             +DLPPL SW++D+LVK IKQLAP TNWI+VVEN+DYEGFYIP EEAFSFFMSVY++A Q
Sbjct: 301  STDLPPLGSWDIDILVKTIKQLAPGTNWIKVVENMDYEGFYIPNEEAFSFFMSVYRHASQ 360

Query: 361  EPFPLHAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQAN 420
            + FP+H +CGSVWKN  GQLS L+YAV +PPEVFTFAHS RQL Y DAV G KLQ G AN
Sbjct: 361  DLFPVHVLCGSVWKNALGQLSLLKYAVLAPPEVFTFAHSGRQLVYNDAVHGQKLQVGHAN 420

Query: 421  HAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHINTAYNLIQYEVSFA 480
            HAWL LDLL+VLCQL+E GH+S  RS+LEYPLK CPE+LLLGM+HINTAY L+QYEVSF 
Sbjct: 421  HAWLSLDLLEVLCQLAERGHSSSVRSILEYPLKHCPEILLLGMSHINTAYKLLQYEVSFT 480

Query: 481  VFPMIIKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEM 540
            VFPMIIKST S+GMIL++WH+NPN+V+RGFVDA N+EPDCTI+IL+ICQELKILSSVL+M
Sbjct: 481  VFPMIIKSTTSSGMILYLWHINPNVVVRGFVDAYNIEPDCTIKILDICQELKILSSVLDM 540

Query: 541  IPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEECLKFVKEVQFGRSQDFSAQPF 600
            IP    IRLAV+AS+KEL+DLEKWL+ NL  YKD FFEE               FS++PF
Sbjct: 541  IPYAIGIRLAVLASRKELIDLEKWLTTNLIAYKDFFFEE---------------FSSKPF 585

Query: 601  HHSGALLNLYMEKIPVILKLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAADSS 660
            HH+ +++N+YME   + LK+LKA  GLI S++LS+E+E+    + DS PRLQNG +ADSS
Sbjct: 586  HHASSVVNIYMEASSIFLKVLKAQTGLIISSQLSDEMERLHITITDSNPRLQNGGSADSS 645

Query: 661  TSEGYADDIEAEANSYFHQMFSGQLTIEAMVQMLARFKESSVKREHSIFECMIGNLFEEY 720
            T E ++DD+EAEANSYFHQMFSGQLTIEAMVQMLARFKES V+RE  IFECMIGNLFEEY
Sbjct: 646  TPEPFSDDVEAEANSYFHQMFSGQLTIEAMVQMLARFKESPVRREQLIFECMIGNLFEEY 705

Query: 721  RFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMFVFGTKALE 780
            RFFPKYPERQL+IAAVLFGS+IKHQLVTHLTLGIALRGVLDALRKP DSKMF+FGTKAL+
Sbjct: 706  RFFPKYPERQLKIAAVLFGSVIKHQLVTHLTLGIALRGVLDALRKPPDSKMFIFGTKALD 765

Query: 781  QFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLESDGASNPAAHQHVS 840
            QFVDRLIEWPQYCNHILQISHLR+TH+E+V+FIER LARISSGHLESDG +  A+H H  
Sbjct: 766  QFVDRLIEWPQYCNHILQISHLRTTHSEIVSFIERQLARISSGHLESDGNNGSASHHHGL 825

Query: 841  SQATSGNGEVSGSGITQLGQQLSSQIQLQQRSESVVDDRHKVSAASSSDMKPLLSSIGQP 900
            SQA+SGNGE+    I Q  QQLSS + +QQR ES +D+RHKV  ASS+D K +LSS GQ 
Sbjct: 826  SQASSGNGELISVNIPQSVQQLSSTLNVQQRHESPLDERHKVFLASSNDTKSVLSSGGQ- 884

Query: 901  SSVAPLGDTSSAQKLHNAVSAPAMLSISSGFARPSRGVTSTKFGSALNIETLVAAAERRE 960
            SSVAPL D S AQK  +A  A AMLS S GF RPSRGVTSTKFGSALNI TL AAAERRE
Sbjct: 885  SSVAPLSDNSIAQK--SAAGATAMLSSSHGFIRPSRGVTSTKFGSALNIGTLEAAAERRE 942

Query: 961  TPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNF 1020
            TPIEAPASE+QDKISFIINNISA N+EAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNF
Sbjct: 943  TPIEAPASEIQDKISFIINNISAANIEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNF 1002

Query: 1021 HDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIG 1080
            HDLYLKFLDKV+SKALN+EIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIG
Sbjct: 1003 HDLYLKFLDKVSSKALNKEIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIG 1062

Query: 1081 RNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLA 1140
            RN VLR REIDPKSLIIEAYEKGLMIAVIPFTSK                          
Sbjct: 1063 RNHVLRGREIDPKSLIIEAYEKGLMIAVIPFTSK-------------------------- 1096

Query: 1141 EIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKREIEGNPDFSNKDVGASQPQ 1200
                             VLFKNLGVDMKDI PTSLLKDRKRE+EGNPDFSNKDVG SQPQ
Sbjct: 1097 -----------------VLFKNLGVDMKDIAPTSLLKDRKREMEGNPDFSNKDVGVSQPQ 1139

Query: 1201 LVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTLMEDEKLAALGI 1260
            +VPEVKP I+SPL HVDLPL+VA+PPN+ G THLL QYAAP+ LS GTL EDEKLAALG+
Sbjct: 1140 IVPEVKPGIISPLNHVDLPLEVANPPNAVGHTHLLPQYAAPVNLSVGTLTEDEKLAALGM 1199

Query: 1261 SDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMD 1320
            SDQLP  QGLFQA+ +QSPFSVSQL T +PN GT VIINQK  + GLHLHFQR+VP+ MD
Sbjct: 1200 SDQLPPGQGLFQATPNQSPFSVSQLPTALPNFGTLVIINQKFNSWGLHLHFQRLVPLVMD 1259

Query: 1321 RAIKEIVSGIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCK 1380
            RA+KEIVS IVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCK
Sbjct: 1260 RAVKEIVSSIVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCK 1319

Query: 1381 EPLRGSISSQLRNSLQGLTIASELLEQAVQLVTNDNLDLGCAVIEQAATDKAIQTIDGEI 1440
            EPLR SIS+QLRNSLQGL   S+LLE AVQL TNDNLDLGCA IEQAATDKAIQTID EI
Sbjct: 1320 EPLRNSISTQLRNSLQGLNSTSDLLEHAVQLATNDNLDLGCAAIEQAATDKAIQTIDAEI 1379

Query: 1441 AQQLSLRRKHREGVGSSFFDPNIYAQGSMGV-PEALRPKPGHLSVSQQRVYEDFVRLPWQ 1499
            AQQLSLRRKHR+GVG +FFD N+Y+QGSMGV PEALRPKPGHLSVSQQRVYEDFVRLPWQ
Sbjct: 1380 AQQLSLRRKHRDGVGPTFFDANLYSQGSMGVVPEALRPKPGHLSVSQQRVYEDFVRLPWQ 1439

Query: 1500 NQSSQGSHAMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRPSDVASGT 1559
            NQS QGSH +  GS TS+   A A AYG   GQ N GYSS+ G+ GF+AVSR  D+ S  
Sbjct: 1440 NQSGQGSHTIPMGSSTSAVSTALAGAYGSGSGQLNPGYSSAPGNVGFEAVSRTLDMGSDA 1499

Query: 1560 TESTSAGFLSTSLVHIGAADGGILHNSESESVNAAFTPAA-TELYAADSTEPVKVRILEP 1618
            TES SA  LS+S +HIGA DG I  NSE+ + + +F+ AA    ++ D+++ VK    E 
Sbjct: 1500 TESNSAAILSSSSIHIGATDGAIQPNSENSATSVSFSSAAPASEHSGDTSDTVK----EL 1555

Query: 1619 GASSQSLPSTAAPERIGSSILEPSLQTRDALDKYHIVAQKLDALIGNDAREAEVQGVISE 1678
            G SSQ + S+AA +R+ +S  EP+L TRDALDKY IVAQKL+AL+ +D RE E+QG+I+E
Sbjct: 1556 GISSQPISSSAASDRLVTSASEPTLNTRDALDKYQIVAQKLEALVSSDGREVEIQGLITE 1615

Query: 1679 VPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVCKLVVKELTSW 1738
            VPEIILRC+SRDEAALAVAQKVFKGLYENASNN H +A LAILAAIRDVCKLVVKELTSW
Sbjct: 1616 VPEIILRCVSRDEAALAVAQKVFKGLYENASNNFHVNACLAILAAIRDVCKLVVKELTSW 1675

Query: 1739 VIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDE 1798
            VIYSDEERKFN+DIT+GLIRSELLNLAEYNVHMAKLIDGGRNK ATEF+ISL+Q LV +E
Sbjct: 1676 VIYSDEERKFNKDITVGLIRSELLNLAEYNVHMAKLIDGGRNKGATEFSISLIQALVVEE 1735

Query: 1799 SRVVISELHNLVDALAKLAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSK 1858
            S+V ISELHNLVDALAKLAAKPGS ESLQQLIEIVRNP AN+   SG T  K+DK+RQS+
Sbjct: 1736 SKV-ISELHNLVDALAKLAAKPGSSESLQQLIEIVRNPVANSAVISGFTVGKEDKSRQSR 1794

Query: 1859 DKKAYSHTTANREDYNIPESVDPDPVGFPEQVSMLFAEWYQICELPGSNDAACTRYVLQL 1918
            DKK                            VS+LFAEW++IC+LPG+NDAA T Y+LQL
Sbjct: 1795 DKK----------------------------VSLLFAEWFRICDLPGANDAASTHYILQL 1826

Query: 1919 HQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLSFLAIDIYAKLML 1978
            HQNGLLKGDDMTDRFFR +TE+SVAHCLSSEVIN G LQSPQQ Q+LSFLAIDIYAKL+ 
Sbjct: 1827 HQNGLLKGDDMTDRFFRIITELSVAHCLSSEVINSGALQSPQQGQNLSFLAIDIYAKLVF 1886

Query: 1979 SILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLD 2038
            SILK   VEQGS++ FLLSKIL VTV+FI KD+EEKK SFNPRPYFRLF+NWLLD+ S D
Sbjct: 1887 SILK---VEQGSNRFFLLSKILAVTVRFIQKDSEEKKLSFNPRPYFRLFVNWLLDLVSPD 1943

Query: 2039 PVADGSNFQILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQR 2098
            P+ DG+N QIL+AFANAFH LQPLKVPAFSFAWLELVSHRSFMPKLL GN QKGWPY+QR
Sbjct: 1944 PIIDGTNLQILTAFANAFHNLQPLKVPAFSFAWLELVSHRSFMPKLLTGNAQKGWPYVQR 2003

Query: 2099 LLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCI 2158
            LLV+L QFLEPFLR+AELG+PV FLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCI
Sbjct: 2004 LLVDLFQFLEPFLRSAELGMPVHFLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCI 2063

Query: 2159 QMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLK 2218
            QMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIR+ P I SEVDAAL+AKQM+ADVD+YLK
Sbjct: 2064 QMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIREAPHILSEVDAALKAKQMKADVDEYLK 2123

Query: 2219 TGQPGSSFLSELKQKLLLPPSEAASAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQST 2278
            T   GSSFLSELKQ+LLL PSEAASAGTRYNVPLINSLVLY GMQAI QLQ R  H+QS+
Sbjct: 2124 TRHQGSSFLSELKQRLLLSPSEAASAGTRYNVPLINSLVLYAGMQAIQQLQARAPHSQSS 2183

Query: 2279 GNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYA 2338
            GN + L   LV AALDI+QTLI +LDTEGRYLFLNA ANQLRYPNNHTHYFSFVLLYL+A
Sbjct: 2184 GNTAPLAVLLVDAALDIYQTLIVELDTEGRYLFLNAVANQLRYPNNHTHYFSFVLLYLFA 2243

Query: 2339 EANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLF 2398
            E+NQEIIQEQITRVL ERLIVNRPHPWGLLITFIELIKNPRYNFWN+SFIRCAPEIEKLF
Sbjct: 2244 ESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLF 2303

Query: 2399 ESVARSCGGLKPVDDSMVSGWVPDNTH 2425
            ESVARSCGGLKP+D+SMVSGWV + TH
Sbjct: 2304 ESVARSCGGLKPMDESMVSGWVSEGTH 2330

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449433000\|ref\|XP_004134286.1\| PREDICTED: LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356523091\|ref\|XP_003530175.1\| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|356504613\|ref\|XP_003521090.1\| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine max]	Back alignment and taxonomy information

>gi\|357512789\|ref\|XP_003626683.1\| CCR4-NOT transcription complex subunit [Medicago truncatula] gi\|355520705\|gb\|AET01159.1\| CCR4-NOT transcription complex subunit [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357512787\|ref\|XP_003626682.1\| CCR4-NOT transcription complex subunit [Medicago truncatula] gi\|355520704\|gb\|AET01158.1\| CCR4-NOT transcription complex subunit [Medicago truncatula]	Back alignment and taxonomy information

>gi\|297734545\|emb\|CBI16596.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359489261\|ref\|XP_003633901.1\| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297842912\|ref\|XP_002889337.1\| hypothetical protein ARALYDRAFT_887229 [Arabidopsis lyrata subsp. lyrata] gi\|297335179\|gb\|EFH65596.1\| hypothetical protein ARALYDRAFT_887229 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|334182230\|ref\|NP_001184889.1\| CCR4-NOT transcription complex subunit 1 [Arabidopsis thaliana] gi\|332189257\|gb\|AEE27378.1\| CCR4-NOT transcription complex subunit 1 [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		2425
ZFIN\|ZDB-GENE-040915-1		2375	cnot1 "CCR4-NOT transcription	0.303	0.309	0.423	2.4e-309
MGI\|MGI:2442402		2375	Cnot1 "CCR4-NOT transcription	0.214	0.218	0.514	7.2e-303
UNIPROTKB\|G3V7M0		2376	Cnot1 "RCG39079" [Rattus norve	0.214	0.218	0.514	7.3e-303
UNIPROTKB\|F1MHU9		2371	CNOT1 "Uncharacterized protein	0.214	0.218	0.514	1.1e-302
UNIPROTKB\|A5YKK6		2376	CNOT1 "CCR4-NOT transcription	0.214	0.218	0.514	1.2e-302
UNIPROTKB\|F1RFU3		2375	CNOT1 "Uncharacterized protein	0.214	0.218	0.514	1.5e-302
DICTYBASE\|DDB_G0276029		2526	DDB_G0276029 "putative CCR4-NO	0.164	0.158	0.585	9.3e-302
UNIPROTKB\|E1BXD4		2129	LOC100858397 "Uncharacterized	0.214	0.243	0.516	1.9e-296
FB\|FBgn0085436		2505	Not1 "Not1" [Drosophila melano	0.307	0.297	0.401	6.7e-270
WB\|WBGene00002845		2641	let-711 [Caenorhabditis elegan	0.267	0.245	0.365	4.5e-194

ZFIN\|ZDB-GENE-040915-1 cnot1 "CCR4-NOT transcription complex, subunit 1" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

 Score = 1400 (497.9 bits), Expect = 2.4e-309, Sum P(5) = 2.4e-309
 Identities = 327/773 (42%), Positives = 451/773 (58%)

Query:  1657 QKLDALIGNDAREAEVQGVISEVPEIILRCISRDE-AALAVAQKVFKGLYENASNNLHFS 1715
             Q L A+    A   + Q + S +  +++   SRD  AAL + QK  +GL +  S      
Sbjct:  1621 QHLHAIPPALAMNPQTQAIRSLLEAVVMARNSRDGIAALGLLQKAVEGLLDATSG----- 1675

Query:  1716 AHLAILAAIRDVCKLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLI 1775
             A   +L + R+   LV+K L     Y  +    N+ IT  LI  E  +  +YNV   +L+
Sbjct:  1676 ADPELLLSYRECHLLVLKALQDGRAYGPQW--CNKQITRCLI--ECRDEYKYNVEAVELL 1731

Query:  1776 DGGRNKAATEFAISLLQTLVTDESRVVISELHNLVDALA--KLAAKPGSPESLQQLIE-I 1832
                      ++ + L Q++    + + ++    LV  L   + +    +   L   IE +
Sbjct:  1732 IRNHLVNMQQYDLHLAQSMENGLNYMAVAFAMQLVKLLLVDERSVSHITEADLFHTIETL 1791

Query:  1833 VRNPXXXXXXXXXXXXXKDDKARQSKDKKAYSHTTA-NREDYN-IPESVD-PDPVGFPEQ 1889
             +R                 D  R + +     H    N   ++ I ++ +  DP G  E+
Sbjct:  1792 MRTSAHSRANAPEGLPQLMDVVRSNYEAMIDRHHGGPNFMMHSGISQASEYDDPPGLREK 1851

Query:  1890 VSMLFAEW---YQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTE--VSVAH 1944
                L  EW   Y        +  A + +V Q+HQ G+LK DD+  RFFR  TE  V +++
Sbjct:  1852 AEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISY 1911

Query:  1945 CLSSEVINPGTXXXXXXXXXXXFLAIDIYAKLMLSILKCCPVEQGS-SKIFLLSKILTVT 2003
                +E  +P T           +  +D + +L+  ++K       + +KI LL+K+L + 
Sbjct:  1912 RAQAEQQHPTTSPAIIRAKC--YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIV 1969

Query:  2004 VKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQILSAFANAFHVLQPLK 2063
             V  +++D + ++  F   PY R+FI  LL++++ + V +  NFQ L+AF N FH+L+P K
Sbjct:  1970 VGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTK 2029

Query:  2064 VPAFSFAWLELVSHRSFMPKLLIGNGQ-KGWPYIQRLLVNLLQFLEPFLRNAELGVPVRF 2122
              P F +AWLEL+SHR F+ ++L    Q KGWP   +LL++L ++L PFLRN EL  P++ 
Sbjct:  2030 APGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELNKPMQI 2089

Query:  2123 LYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNL 2182
             LYKGTLRVLLVLLHDFPEFLCDYH+ FCDVIPP+CIQ+RN+ILSAFPRNMRLPDP TPNL
Sbjct:  2090 LYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNL 2149

Query:  2183 KIDLLPEIRDPPRIFSEVDAALRAKQMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAA 2242
             K+D+L EI   PRI +     + + Q + D+D YLKT  P  +FLSEL+  L +    + 
Sbjct:  2150 KVDMLSEINIAPRILTNFTGVMPS-QFKKDLDSYLKTRSP-VTFLSELRSNLQV----SN 2203

Query:  2243 SAGTRYNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQD 2302
               G RYN+ LIN+LVLYVG QAI       +H  + G+  S++    SA +DIFQ L  D
Sbjct:  2204 EPGNRYNIQLINALVLYVGTQAI-------AHIHNKGSTPSMSTITHSAHMDIFQNLAVD 2256

Query:  2303 LDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEANQEIIQEQITRVLFERLIVNRP 2362
             LDTEGRYLFLNA ANQLRYPN+HTHYFS  +LYL+AEAN E IQEQITRVL ERLIVNRP
Sbjct:  2257 LDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANAEAIQEQITRVLLERLIVNRP 2316

Query:  2363 HPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVDDSM 2415
             HPWGLLITFIELIKNP + FW+  F+ CAPEIEKLF+SVA+ C G K     M
Sbjct:  2317 HPWGLLITFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVM 2369

GO:0005575 "cellular_component" evidence=ND

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

MGI\|MGI:2442402 Cnot1 "CCR4-NOT transcription complex, subunit 1" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

UNIPROTKB\|G3V7M0 Cnot1 "RCG39079" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MHU9 CNOT1 "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|A5YKK6 CNOT1 "CCR4-NOT transcription complex subunit 1" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1RFU3 CNOT1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0276029 DDB_G0276029 "putative CCR4-NOT complex subunit 1" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BXD4 LOC100858397 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

FB\|FBgn0085436 Not1 "Not1" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

WB\|WBGene00002845 let-711 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		2425
pfam04054		375	pfam04054, Not1, CCR4-Not complex component, Not1	1e-180
COG5103		2005	COG5103, CDC39, Cell division control protein, neg	2e-87
pfam12842		147	pfam12842, DUF3819, Domain of unknown function (DU	1e-63
COG5103		2005	COG5103, CDC39, Cell division control protein, neg	4e-46
COG5103		2005	COG5103, CDC39, Cell division control protein, neg	6e-46
COG5103		2005	COG5103, CDC39, Cell division control protein, neg	2e-34

>gnl\|CDD\|217865 pfam04054, Not1, CCR4-Not complex component, Not1	Back alignment and domain information

 Score =  554 bits (1429), Expect = e-180
 Identities = 201/385 (52%), Positives = 258/385 (67%), Gaps = 19/385 (4%)

Query: 2029 NWLLDMSSLDPVADGSNF-QILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIG 2087
            + L +++ LD +       Q   AFA   H LQP+K P F FAWLEL+SHR F+P++L  
Sbjct: 1    SLLYELNRLDSLESKELDSQFYLAFAEYLHSLQPIKYPGFVFAWLELISHRMFLPRMLRL 60

Query: 2088 NGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGTLRVLLVLLHDFPEFLCDYHF 2147
              QKGWP   +LL++LL+FL+ FL+NA L   V+ LYKGTLR+LLVLLHDFPEFL +YH+
Sbjct: 61   PNQKGWPLYVKLLIDLLKFLDEFLKNANLSDAVKVLYKGTLRILLVLLHDFPEFLIEYHY 120

Query: 2148 TFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAK 2207
              CD IPP+CIQ+RN+ILSAFP+NM+LPDP TP LK+D LPEI++ P+I  +  A L++ 
Sbjct: 121  QLCDAIPPNCIQLRNLILSAFPKNMKLPDPFTPGLKVDRLPEIKEAPKILYDPVADLQSA 180

Query: 2208 QMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAAS----AGTRYNVPLINSLVLYVGMQ 2263
             ++  VD+YL+   P  S L  +   L L   E          + NV LIN+LVL+VG+Q
Sbjct: 181  GLKKPVDNYLRIR-PSESLLRTICNGLYLSEDEQTVGIGYDPVKVNVKLINALVLHVGIQ 239

Query: 2264 AIHQLQTRTSHAQSTGNNSSLTAFLVSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPN 2323
            A+               N++      S  + +   L  +LD EGRY  LNA ANQLRYPN
Sbjct: 240  AV-------LEILKKSQNANF--NTKSPHMALLSNLANELDPEGRYYLLNAIANQLRYPN 290

Query: 2324 NHTHYFSFVLLYLY----AEANQEIIQEQITRVLFERLIVNRPHPWGLLITFIELIKNPR 2379
            +HTHYFS V+L+L+     E+ +E IQEQITRVL ERLIVN+PHPWGLLITFIELIKNP 
Sbjct: 291  SHTHYFSCVILHLFGSDEWESQKEDIQEQITRVLLERLIVNKPHPWGLLITFIELIKNPD 350

Query: 2380 YNFWNQSFIRCAPEIEKLFESVARS 2404
            Y FW   FI+ APEIEKLF+S+ARS
Sbjct: 351  YKFWELPFIKSAPEIEKLFDSLARS 375

The Ccr4-Not complex is a global regulator of transcription that affects genes positively and negatively and is thought to regulate transcription factor TFIID. Length = 375

>gnl\|CDD\|227434 COG5103, CDC39, Cell division control protein, negative regulator of transcription [Cell division and chromosome partitioning / Transcription]	Back alignment and domain information

>gnl\|CDD\|221802 pfam12842, DUF3819, Domain of unknown function (DUF3819)	Back alignment and domain information

>gnl\|CDD\|227434 COG5103, CDC39, Cell division control protein, negative regulator of transcription [Cell division and chromosome partitioning / Transcription]	Back alignment and domain information

>gnl\|CDD\|227434 COG5103, CDC39, Cell division control protein, negative regulator of transcription [Cell division and chromosome partitioning / Transcription]	Back alignment and domain information

>gnl\|CDD\|227434 COG5103, CDC39, Cell division control protein, negative regulator of transcription [Cell division and chromosome partitioning / Transcription]	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		2425
COG5103		2005	CDC39 Cell division control protein, negative regu	100.0
KOG1831		1591	consensus Negative regulator of transcription [Tra	100.0
PF04054		379	Not1: CCR4-Not complex component, Not1; InterPro:	100.0
PF12842		147	DUF3819: Domain of unknown function (DUF3819); Int	100.0
KOG1831		1591	consensus Negative regulator of transcription [Tra	93.02
smart00543		200	MIF4G Middle domain of eukaryotic initiation facto	91.68
KOG1467		556	consensus Translation initiation factor 2B, delta	81.67
PF02854		209	MIF4G: MIF4G domain; InterPro: IPR003890 This entr	80.53

>COG5103 CDC39 Cell division control protein, negative regulator of transcription [Cell division and chromosome partitioning / Transcription]	Back alignment and domain information

Probab=100.00  E-value=3.4e-295  Score=2688.94  Aligned_cols=1921  Identities=27%  Similarity=0.394  Sum_probs=1496.3

Q ss_pred             CCcHHHHHHHHHhhhhhchHHHHHHHHHHHH-hccchhhHHHHhhhcccccCC-CCCCCch---HHHHHHHHHHHhhcCC
Q 000072            6 STVPSQIRFLLQSLNEANADSVFRELCQFIE-YGIEGSTMMLQTCMDHLNLHG-TGLKNPQ---LESVVASVFKYIMDKP   80 (2425)
Q Consensus         6 ~~~~~qi~~Lv~~l~k~n~~~~~~el~qlv~-~G~ea~~~~L~~~l~~~~~~~-~~~k~~~---~~~Ll~~~~~~ll~kp   80 (2425)
                      +.+-+||.+|++.|++.||++.-+||.|+++ ...+-.+++||.++.--.++- +.+|...   --++|-+||+.++.|-
T Consensus        25 sIV~AQI~fLlsTL~eDqydt~~eqIRqlinkna~~vY~~~~rRLiq~nS~~If~tGK~~~~~a~~~~LL~Elks~~~Kr  104 (2005)
T COG5103          25 SIVKAQILFLLSTLREDQYDTKLEQIRQLINKNAPRVYHHFLRRLIQGNSYRIFGTGKSSDGLATYKLLLDELKSLTKKR  104 (2005)
T ss_pred             HHHHHHHHHHHHHhhccchhHHHHHHHHHHccCCcHHHHHHHHHHhcccchhhhccCcccchhHHHHHHHHHHHhhhhhh
Confidence            4577899999999999999999999999997 999999999999996443321 2355444   4578889999999865


Q ss_pred             CccchhhhhccCc--ccCHHHHHHHHhhcCCCchhHHHHhhhhccCCChHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHH
Q 000072           81 NFSTVFSQSVKIT--EINEQLLENLSDVLNLSLPERIGIGLALSDSENLDALMCGKNFCMAQIERLCANPVPMNSAEQIQ  158 (2425)
Q Consensus        81 nf~T~lc~A~~~~--~~~~~fl~~ls~~L~Ls~~qev~~gLAL~~s~n~e~~~~g~~f~~~~l~el~~~~~~~~s~e~lh  158 (2425)
                      .     ..|+.+.  ++=++|-=+++            +||.++             .+++....+. |  |+.-|-+=+
T Consensus       105 ~-----sD~Is~~dsevFed~~FQ~s------------iGlT~S-------------Ll~n~Fqs~~-N--q~~~~t~qq  151 (2005)
T COG5103         105 F-----SDAISGSDSEVFEDFHFQFS------------IGLTTS-------------LLKNTFQSLL-N--QLSDPTQQQ  151 (2005)
T ss_pred             h-----hhHhhcchhhhhcchhhhhh------------hhhhHH-------------HHHHHHHHHH-h--hccchHhhh
Confidence            4     6666664  22223322222            344433             2222222222 1  111000000


Q ss_pred             HH----HHHHhcccchhh-hHHHHHHHHhhhcCCCCCCccccCCCCCccccccccccccccccCCCCchHHHHHHhhccC
Q 000072          159 NI----IMFLQRSSDLSK-HVDSLMQILSLLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDDDFDDILAEMEKEM  233 (2425)
Q Consensus       159 ~i----l~~l~~~~gls~-~~~~f~~~l~~~~p~~~~~~~laPll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (2425)
                      .+    +-.|++  |-.. ...-|.+.+...--+                   +.+... +.+.++.+- +.+..+    
T Consensus       152 S~d~NDld~lr~--~~Tdydr~~f~q~i~~~Le~-------------------s~~~~~-~~~p~e~~~-~~l~~~----  204 (2005)
T COG5103         152 SIDKNDLDLLRE--GTTDYDRKIFRQEIKDVLEK-------------------SDPLTA-LFGPREVDR-SFLDDA----  204 (2005)
T ss_pred             hcccchHHHHhc--CCchHHHHHHHHHhHHHHHc-------------------CCchhh-hcCcchhhH-HHHHHH----
Confidence            00    001111  1110 111122221111000                   001010 000011100 011111    


Q ss_pred             cHHHHHHhhCcccccCHHHHHHHHhcCCCCCHHHHHHHHHHHHhhccCCccCccchhhHhhhccCCCCCCCCCCCCCCHH
Q 000072          234 SMGDVMNELGYGCSADASQCKEILSLFTPLTEITLSRILGAIARTHAGLEDNQNTFSTFTLALGCSTMSDLPPLSSWNVD  313 (2425)
Q Consensus       234 ~l~~~i~e~G~~~t~s~~~c~~~L~~~~~l~e~~va~~l~~mart~sgl~~~~~~~~~~~~~~~~~~~~~~~~~~~wn~~  313 (2425)
                                         ..++|+-.+.-.+.|||+.+-.|+.-                          ++.+.||.-
T Consensus       205 -------------------l~~Il~P~~~~~~~dvar~il~~~~~--------------------------~D~~~w~~v  239 (2005)
T COG5103         205 -------------------LQRILRPRREVVPEDVARAILFMADF--------------------------PDRGEWNLV  239 (2005)
T ss_pred             -------------------HHHHhCCCccCCcchHHHHHhhhhhc--------------------------ccccccchH
Confidence                               23445534468889999984444422                          225679999


Q ss_pred             HHHHHHHhhCCCCCHHHHHHhcCCCCCCCCChhhHHHHHHHHhh-hcCCCccccccccCcccCchh-hHHHHHHHhhCCC
Q 000072          314 VLVKAIKQLAPNTNWIRVVENLDYEGFYIPTEEAFSFFMSVYKY-ACQEPFPLHAVCGSVWKNTEG-QLSFLRYAVASPP  391 (2425)
Q Consensus       314 vlv~alk~~~p~~nW~~V~~~lD~~~f~i~d~~~l~ll~~~~~~-~~~~~fpi~~l~~~~W~N~~~-Qlsfl~~~l~~p~  391 (2425)
                      ..+.+++..+..+||.+|+.+||.+.|.|+....+..++.+|-. +.+.+||.+.+|. .|||... |+++.-|..+.+.
T Consensus       240 ~~~~a~~s~~e~iNW~~v~s~f~~~~F~i~~l~p~~v~~~c~f~~~~~~~v~~eff~~-~Wkn~~~~~l~i~lhi~s~~~  318 (2005)
T COG5103         240 AIVGAMKSNLEEINWRDVYSCFLDVNFSIWTLEPLYVIIDCWFYISGIITVPYEFFFK-RWKNERAQILFIRLHIESDEK  318 (2005)
T ss_pred             HHHHHHHhhhhhcCHHHHHHHhcCcceeeccCcchHHHHHHHHHHhcCCCccHHHHHH-HhcchhhhhHhhheeeeeccc
Confidence            99999999999999999999999999999977666666665554 4567899999994 9999999 5555556666666


Q ss_pred             cccccCc-CccccccccCCCCccccc-cccccccchHHHHHHHHHhhhcCchHHHHHHhhhhhhcChhHHHHHhhcc---
Q 000072          392 EVFTFAH-SARQLPYVDAVPGLKLQS-GQANHAWLCLDLLDVLCQLSEMGHASFARSMLEYPLKQCPEMLLLGMAHI---  466 (2425)
Q Consensus       392 ~~f~f~~-~~r~~v~~d~~~~~~~~~-~~~~~~W~sldl~e~L~~Lae~~~~~~v~~l~e~p~k~~pe~lllgl~~i---  466 (2425)
                      ..|+... .+.+.|..+...+.+... -...+++||.+|++++. +++.....-..++|   ....||++.+||..+   
T Consensus       319 ~~fd~~Nv~~tr~Vs~~~~~~~~~~ny~~~~snlNc~el~Q~~~-l~~~p~i~y~~~lF---lN~~pE~~~a~L~~~~~~  394 (2005)
T COG5103         319 RTFDYSNVFFTRIVSIEDSRGHRFKNYMGYESNLNCVELFQCIM-LGSLPLIEYIARLF---LNKSPEWCAAGLGFVQPK  394 (2005)
T ss_pred             chheecccceeEEEeeecCchHHHHHHHHHhcccCHHHHHHHHH-hccchHHHHHHHHH---hccCHHHHHHHHHHhhhh
Confidence            7788754 344555544433322222 24779999999999994 43332222233466   789999999999654   


Q ss_pred             --CcchhHHHHHHHHhhhHHhHcC-CCchHHHHHHHhhCChhHHHHHHHhhhcCCccHHHHHHHHHHhhhHHHHhhcCCc
Q 000072          467 --NTAYNLIQYEVSFAVFPMIIKS-TMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCTIRILEICQELKILSSVLEMIPS  543 (2425)
Q Consensus       467 --~~~~~~l~~ell~~lf~~fl~~-~~~~~vi~~lW~~~~~~~~~~l~d~y~~d~~~l~rIldvaqelk~L~~ll~~~p~  543 (2425)
                        +-.||+.+.+.....+-+++.| .++++|+..+...+|+++++...-...+|...++|++|+.-|+|.|+.+.|..|.
T Consensus       395 f~~L~~N~v~~s~if~~ll~~f~n~~p~sFvfv~~~rT~p~~~~~~~r~v~~kd~~pv~~~l~~~le~~~l~~V~n~lP~  474 (2005)
T COG5103         395 FSPLAWNPVQESRIFEELLMGFANGAPNSFVFVVLFRTHPEMMLQKSRLVLAKDGIPVSRLLDIFLEHKMLPLVSNLLPP  474 (2005)
T ss_pred             hhhhhcCchHHHHHHHHHHHHHhcCCCCceEEEEEEecCHHHHHHHHHHHHhcCCCcHHHHHHHHHhcCchhhhhhcCCH
Confidence              4579999999888877777755 5889999999999999999999888899999999999999999999999999999


Q ss_pred             hhHHHHHHHhhcccccCHHHHHHHHhhcCcc-h----HHHHHHHHHHHHhhcccccccCCCCCCCcccccccchhHHHHH
Q 000072          544 PFAIRLAVIASQKELVDLEKWLSINLSTYKD-V----FFEECLKFVKEVQFGRSQDFSAQPFHHSGALLNLYMEKIPVIL  618 (2425)
Q Consensus       544 ~f~idLa~lAsrre~l~lekWl~~~l~~~~~-~----f~~a~l~FL~~k~~~~~~~~~~~~~~~~~~~~~L~~~tv~~lL  618 (2425)
                      .|++|+++|++.|+.++|..|+..++....+ +    |+...++||+.|+.......+.   ...+-+  ++..|+-.+|
T Consensus       475 ~f~~~i~vL~~aR~~l~~~~Wl~~~~~~~~dad~~NVfvv~~~~~l~sk~s~~k~p~~q---~ee~~~--f~~~tvieil  549 (2005)
T COG5103         475 EFCFDIIVLSSARDHLNLGIWLSNNLTTRKDADGLNVFVVSLVQYLDSKVSKHKEPEKQ---KEESVM--FPLNTVIEIL  549 (2005)
T ss_pred             HHHHHHHHHHHHHHhcchhhhcccCceeeecCCcccchHHHHHHHHHHHHhhcCChhhh---ccccee--eehhhHHHHH
Confidence            9999999999999999999999999987665 3    9999999999999754321111   111223  3345555555


Q ss_pred             HHHHhhhCCCCchHHHHHHHHHHHHHhhcCCCCCCCCCC-CC-----CCCCCChhhHHHHHHHHHHHHhccCCCHHHHHH
Q 000072          619 KLLKAHIGLITSTKLSEEIEKFQAVVLDSTPRLQNGEAA-DS-----STSEGYADDIEAEANSYFHQMFSGQLTIEAMVQ  692 (2425)
Q Consensus       619 ~~L~~~~~~~~s~~l~e~l~~v~~~~i~~~PrL~n~~~~-d~-----~~~~~~~~diE~ean~yfqkmY~~eisI~~iv~  692 (2425)
                      ..+.....     +-.+.++.++..|++.||||++.+.+ |+     .+.++++.|||+||.+|||+||+++++|+++|+
T Consensus       550 ~t~~~~V~-----q~~~~~k~~~~~~l~~fprli~~G~~~Ds~v~at~tt~s~~~dIE~E~~sy~q~~y~~~~~I~~~I~  624 (2005)
T COG5103         550 GTFTKAVE-----QYIRILKPETVVVLNEFPRLIPHGLRRDSIVAATNTTRSKEIDIEEEASSYIQQIYNSQRGIESSIN  624 (2005)
T ss_pred             HHhHHHHH-----HHHHhcCcceEehHhhhhhhccCCCCcchhhhccCcccccCccHHHHHHHHHHHHHHhcccHHHHHH
Confidence            54433221     11567788888999999999998754 43     356789999999999999999999999999999


Q ss_pred             HHHHhhcCCCcccchhHHHHHHhhhhhhcCCCCCcHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHhcCCCCCccc
Q 000072          693 MLARFKESSVKREHSIFECMIGNLFEEYRFFPKYPERQLRIAAVLFGSIIKHQLVTHLTLGIALRGVLDALRKPADSKMF  772 (2425)
Q Consensus       693 ~L~~~k~S~~~rdqdiFaCMih~LFdEYrff~~YP~~eL~~TA~LFG~lI~~~Lv~~~~L~iALr~VLeAlrkp~~SkMf  772 (2425)
                      .||+|++|++|||+|+|+|+-|.|||||+||++||+++|++|||||||||+++|+++.+|++|+|||..++++|++||||
T Consensus       625 ~l~~f~~senprd~elfsci~hal~~ey~ff~dyPl~ALaltavLfGslI~f~ll~~~~L~vA~ryI~~~lk~P~~skmf  704 (2005)
T COG5103         625 QLKEFLRSENPRDKELFSCIFHALLEEYGFFYDYPLSALALTAVLFGSLIKFRLLPKPYLRVAIRYIKGSLKHPENSKMF  704 (2005)
T ss_pred             HHHHHhhcCCcchHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcCCCchhhH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHHHhhhhhhHHHHHHhcccccccccHHHHHHHHHHHHhhccCCCCCCCCCCCcccccccccccCCCCCccC
Q 000072          773 VFGTKALEQFVDRLIEWPQYCNHILQISHLRSTHAELVAFIERALARISSGHLESDGASNPAAHQHVSSQATSGNGEVSG  852 (2425)
Q Consensus       773 ~FGiqAL~qF~~RL~EwPqyC~~Llqip~L~~t~p~l~~~ie~~l~~~~~~~~~~~~~~~~~~~q~~~~q~~~~~~~~~~  852 (2425)
                      +||+|||++|+.||++||+||+.++.||.|+. .|++|+.|-++..    ..+.       .+                 
T Consensus       705 ~Fg~qal~~Fq~kLp~Yp~yc~~vl~ip~l~~-r~~iy~sivem~s----~eNt-------~~-----------------  755 (2005)
T COG5103         705 SFGFQALEVFQEKLPSYPSYCSEVLEIPTLNN-RILIYKSIVEMDS----NENT-------EV-----------------  755 (2005)
T ss_pred             HHHHHHHHHHHHhhhhhhHHHHHHhccccccc-chHHHHHHHHHHh----ccCC-------cc-----------------
Confidence            99999999999999999999999999999965 8999998855543    1100       00                 


Q ss_pred             CcccccccchhhhHHhhhcccccccccccccccCCCCCCCCcccCCCCCcccCCCCCchhhhhcccCCCccccccCCCcc
Q 000072          853 SGITQLGQQLSSQIQLQQRSESVVDDRHKVSAASSSDMKPLLSSIGQPSSVAPLGDTSSAQKLHNAVSAPAMLSISSGFA  932 (2425)
Q Consensus       853 ~~~~~~~~q~~~~~~~qq~~~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  932 (2425)
                                               ++       ++++.|.   ++..                             .|+
T Consensus       756 -------------------------Ek-------a~p~~pm---~pl~-----------------------------~fv  771 (2005)
T COG5103         756 -------------------------EK-------ANPTHPM---LPLE-----------------------------DFV  771 (2005)
T ss_pred             -------------------------cc-------cCCCCcc---cchh-----------------------------hhh
Confidence                                     00       0111111   0000                             000


Q ss_pred             CCCCCccccccccccchHHHHHHhhhcCCCCCCCChhhhHhHhhhhhcCCcccHHHHHHHHHHHhhhcchhHhHHHHHhh
Q 000072          933 RPSRGVTSTKFGSALNIETLVAAAERRETPIEAPASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMK 1012 (2425)
Q Consensus       933 ~p~~~~~~~~~~~~~ni~tL~~~~e~~~~~~e~P~e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~~~y~~WFA~YLV~k 1012 (2425)
                      +-                     .-+-+...|--++|+..+|+|.+||++..|+..|++|+|+.|+|.|.+||+.|||.+
T Consensus       772 ~~---------------------~v~c~~n~Eg~~~evV~~iLFaiNNl~~ln~n~ki~~lk~~Ltp~y~~wfs~y~vtq  830 (2005)
T COG5103         772 RL---------------------IVKCDANNEGRATEVVKSILFAINNLLDLNRNDKIHRLKEALTPGYVGWFSIYMVTQ  830 (2005)
T ss_pred             ee---------------------EeccccCccccHHHHHHHHHHHhhhHHhhhccchHHHHHHhcCcccccceeeEEEEe
Confidence            00                     000012234456777888999999999999999999999999999999999999999


Q ss_pred             hcccCCcchHHHHHHHHHhCChhHHHHHHHHHHHHHHHHhcccccccChHHHHHHHHhhhhhhhhhhhcCcccccCCCCh
Q 000072         1013 RASIEPNFHDLYLKFLDKVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDP 1092 (2425)
Q Consensus      1013 RasiEPN~H~LYl~fl~~l~~~~L~~~Vl~eTy~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k~ld~ 1092 (2425)
                      |++.|||||+||.++++.++++.||+.+.+.|.+.++.||+...-  +.+|+++|||||+|||+|||||||||+|+++||
T Consensus       831 R~~~e~n~~~ly~kvve~lgS~dly~~~~r~TL~~l~~ll~~~~e--s~~ekk~lKnLgswLG~ItLa~NkpIt~~q~~F  908 (2005)
T COG5103         831 RSTAEENCRRLYGKVVERLGSKDLYLRFSRKTLEFLKMLLDYRCE--SPSEKKVLKNLGSWLGRITLAKNKPITSEQFDF  908 (2005)
T ss_pred             eccccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhcccc--ChHHHHHHHHHHHHHhHHHHhhcCccccccccH
Confidence            999999999999999999999999999999999999999997644  889999999999999999999999999999999


Q ss_pred             hhHHHHHHhcCceEEEechhhhcccccCCCccccCCCccHHHHHHHHHHHhcCCcccchhHHHHHHHHhhcCCCcccccc
Q 000072         1093 KSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITP 1172 (2425)
Q Consensus      1093 K~LL~eaY~~g~L~~VIPFV~KVLe~~~~S~vFkPPNPWtm~IL~lL~Ely~~~~LKlnLKFEIEVL~K~L~ld~~diep 1172 (2425)
                      |++|+|||+.||+..|||||||||++++.|+||||||||+||||+||.|||+++++|++||||||+|+||||++++.|||
T Consensus       909 k~~lve~~~~~Ri~~vvpFV~k~L~~as~s~IFkPpNPW~mgILkLL~El~~~a~~~l~lkFEie~Ll~~lnv~~~~ikP  988 (2005)
T COG5103         909 KKFLVESVECRRILFVVPFVSKFLRQASCSIIFKPPNPWVMGILKLLSELHSCAPRVLRLKFEIEGLLRHLNVELVPIKP  988 (2005)
T ss_pred             HHHHHHHhhcCceEEeehHHHHHHHhcccceEecCCCchHHHHHHHHHHHHhcCcceeehhhhHHHHHHhcceeeccCCh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccchhh---ccCCCCCCCCCcCCCCCcccCCCCccccCCCCCCCCCCCcCCCCCCCCCcccccccccccccCcCcc
Q 000072         1173 TSLLKDRKRE---IEGNPDFSNKDVGASQPQLVPEVKPAIVSPLGHVDLPLDVASPPNSGGPTHLLSQYAAPLRLSSGTL 1249 (2425)
Q Consensus      1173 s~~L~~r~~~---~~~~~d~~~~~~~~~q~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~l 1249 (2425)
                      ++.++++...   +|.               ..||.      -++ .+.|.+          ..+++||.... .++. .
T Consensus       989 s~~~~n~~V~ks~LEk---------------e~~Ed------vL~-a~~~d~----------~~~~~qyi~~~-sSq~-T 1034 (2005)
T COG5103         989 SKSLGNHLVLKSRLEK---------------ELPED------VLN-AKFPDG----------TDYLAQYIIED-SSQI-T 1034 (2005)
T ss_pred             hhhhCcHHHHHHHHhh---------------hchHH------HHh-hhcccc----------chHHHHHHHHh-hhcc-h
Confidence            9999876531   110               11110      000 001100          01233332100 0000 0


Q ss_pred             hhHHHHhhccCCCCCCccccccccCCCCCCCcccccccCCCCCCceEEecccccccccchhhhhhHHHHHHHHHHhhhhh
Q 000072         1250 MEDEKLAALGISDQLPSAQGLFQASQSQSPFSVSQLSTPIPNIGTHVIINQKLTALGLHLHFQRVVPIAMDRAIKEIVSG 1329 (2425)
Q Consensus      1250 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~s~~~i~~~ip~l~~~~~i~~~l~~~~~~p~Lk~iv~~Ai~RAIrEII~P 1329 (2425)
                      .+| .++.                                      +...|       -|.+|++.++|++.+||||++.
T Consensus      1035 vtD-~va~--------------------------------------~~g~P-------~PaiK~~~Qlal~~SVrEI~~a 1068 (2005)
T COG5103        1035 VTD-LVAR--------------------------------------HVGSP-------KPAIKNLTQLALDLSVREICGA 1068 (2005)
T ss_pred             HHH-HHHH--------------------------------------HcCCC-------ChHHHHHHHHHHHHHHHHHHHH
Confidence            001 0111                                      01111       2899999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHhhccCCChhhHHHHHHHHHHHHHHHhhhhHHHchHHHHHHHHHHHHHHhhcCCCcHHHHHHHH
Q 000072         1330 IVQRSVSIATQTTKELVLKDYAMESDETRIYNAAHLMVASLAGSLAHVTCKEPLRGSISSQLRNSLQGLTIASELLEQAV 1409 (2425)
Q Consensus      1330 VVeRSVtIA~iTT~eLV~KDFA~E~DE~kmr~AAh~MVr~LAgSLAlVTCkEPLr~si~~~Lr~ll~~~~~~~~~~E~~i 1409 (2425)
                      |||||+.||++||..|++||||||.|+.++..||++||++|||+||+|||+|||++.|.+++|++..++.+....+.+++
T Consensus      1069 VVeks~gIAi~Tt~~l~~KDFa~ev~~s~l~~aar~Mv~~La~~La~vT~~EPlk~~i~~n~rs~a~~l~sv~~~~ae~v 1148 (2005)
T COG5103        1069 VVEKSCGIAIQTTMALFKKDFAMEVEKSMLYVAARNMVVNLAKFLALVTAQEPLKACISGNVRSYAMKLCSVLDFSAEKV 1148 (2005)
T ss_pred             HHHHhccchhhHHHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHhccHHHHHHHHhhhhhchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999887776667788889


Q ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-CCCCCcCcccccccccCCCCCCCCCCCCCChhHHH
Q 000072         1410 QLVTNDNLDLGCAVIEQAATDKAIQTIDGEIAQQLSLRRKHREG-VGSSFFDPNIYAQGSMGVPEALRPKPGHLSVSQQR 1488 (2425)
Q Consensus      1410 ~~~vnDNldLac~iIEKaA~EkAi~eIde~l~~~~~~RRkhre~-~g~~f~D~~~~~~~~~~lPe~LrlkpgGl~~~Q~~ 1488 (2425)
                      ..++++|++.||.+||||+++|++++|+..|+.++..||+||++ ++.||+||++ +..+++||++|+++-||+||+|++
T Consensus      1149 d~~~~eN~~va~~lIe~a~~~k~~~~i~aei~h~Iv~R~~Hrktt~n~PFvd~aa-a~~slnLps~L~ls~~~~Tpqqf~ 1227 (2005)
T COG5103        1149 DKIAMENQDVACRLIERAGVSKVSESISAEIEHMIVERVRHRKTTPNLPFVDPAA-ANLSLNLPSSLELSIGKATPQQFS 1227 (2005)
T ss_pred             HHHHHhchhHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhccCCCCCccCccc-CccccCCCcccccccCCcCHHHhh
Confidence            99999999999999999999999999999999999999999998 7899999997 555788999999999999999999


Q ss_pred             hhhhhhcCCCCCCCCCCCCccccCccCCCCchhhhhcccCCCCCCCCCCCCCCCCCCccccCCCcccCCCCcccCccccc
Q 000072         1489 VYEDFVRLPWQNQSSQGSHAMSAGSLTSSGDAAQASAYGLAGGQGNQGYSSSAGSTGFDAVSRPSDVASGTTESTSAGFL 1568 (2425)
Q Consensus      1489 VYEdF~r~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l 1568 (2425)
                      +||||.|+|-..-   .+|.+.++.-+          -...++         .+++++     |.++.      +.++.-
T Consensus      1228 lyE~fD~l~ls~i---~~h~~~~~~n~----------~~Td~a---------dstdal-----~~nl~------nt~e~e 1274 (2005)
T COG5103        1228 LYEDFDRLSLSTI---MGHIEKIAINA----------IDTDSA---------DSTDAL-----NNNLN------NTVENE 1274 (2005)
T ss_pred             hhhcccccccccc---ccccchhhhhh----------hcCChh---------hhhhhh-----ccccc------hhhhhH
Confidence            9999999763221   22222211100          000000         000000     00000      000000


Q ss_pred             ccchhccccCCCCccccccccccccccchhhhhhhccCCCchhhhhccCCCCCCCCCCCCcccccccccccCCccchHHh
Q 000072         1569 STSLVHIGAADGGILHNSESESVNAAFTPAATELYAADSTEPVKVRILEPGASSQSLPSTAAPERIGSSILEPSLQTRDA 1648 (2425)
Q Consensus      1569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1648 (2425)
                      ..|+++..+.                     +.+...  ++..+.-.+....+++.+++                    +
T Consensus      1275 AnQta~~yq~---------------------n~L~i~--~ql~Ql~~~~Py~~~~~V~a--------------------D 1311 (2005)
T COG5103        1275 ANQTALEYQE---------------------NLLIIK--AQLVQLSKKIPYSSKKNVIA--------------------D 1311 (2005)
T ss_pred             HHHHHHHHHH---------------------Hhhhhh--hHHHHhcccCCcchhhcCcc--------------------h
Confidence            0011100000                     000000  00000000000111111111                    2


Q ss_pred             HHHHHHHHHHHHHHhhcCccchhHHHHhhhhHHHHHhhcChhHHHHHHHHHHHHHHhhccCCcchHHHHHHHHHHHHHHh
Q 000072         1649 LDKYHIVAQKLDALIGNDAREAEVQGVISEVPEIILRCISRDEAALAVAQKVFKGLYENASNNLHFSAHLAILAAIRDVC 1728 (2425)
Q Consensus      1649 Le~~~~~~~~l~~l~~~~~~~~~i~~~~~~v~~~i~~~~~rde~al~~aqkv~~~L~~~~~~~l~~ev~~~~L~~L~~~~ 1728 (2425)
                      .|+.     .+...      -+++..++.+|...|.++   |+.++.++|.+++.|+..+.+++++||+.++||+||+++
T Consensus      1312 ~e~~-----~lkE~------~NQ~~t~~~~Il~~Ia~s---d~~~l~c~q~c~~il~~~skSp~~~evls~~lEkic~~S 1377 (2005)
T COG5103        1312 EEHG-----LLKEG------KNQFETVFRRILESIASS---DDKDLECIQLCRYILGHLSKSPSKEEVLSRCLEKICKIS 1377 (2005)
T ss_pred             hhhh-----HHHhh------HHHHHHHHHHHHHHhccc---hhhHHHHHHHHHHHHhccccCchHHHHHHHHHHHHHhHh
Confidence            2211     11111      135666777777666654   999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhccccccccCHHHHHHHHHhCCCChhhHHHHHHHHHhcCCChhHHHHHHHHHHHHhcCCchh-hHhhHH
Q 000072         1729 KLVVKELTSWVIYSDEERKFNRDITMGLIRSELLNLAEYNVHMAKLIDGGRNKAATEFAISLLQTLVTDESRV-VISELH 1807 (2425)
Q Consensus      1729 ~~~~k~vt~wl~~~~d~rk~N~~vi~~Lir~~Li~~~e~D~~Lak~i~~~~n~~av~Fa~~Ll~~~l~~~~~~-~~~df~ 1807 (2425)
                      -+++|+|.||++|+.|.||||+|+|.+||+++|||..|||.+|++.|.+.. ..++|||+.|++.++..|.++ +..||.
T Consensus      1378 ~kt~k~V~~wl~ysnD~rKfnip~I~slie~nli~~~E~D~~l~r~i~~~~-gnvtdFai~Ll~~~V~~e~pi~~~~dFI 1456 (2005)
T COG5103        1378 FKTQKEVLGWLIYSNDPRKFNIPLIGSLIEHNLINVVEYDQALSRKIPLAD-GNVTDFAIALLASLVTAEVPICTVYDFI 1456 (2005)
T ss_pred             HHHhhhhheeeeecCChhhcCcHHHHHHHHhccchhhhHHHHHHhhccccc-cchHHHHHHHHHHHhccCCceeeHHHHH
Confidence            999999999999999999999999999999999999999999999997644 458999999999777777665 559999


Q ss_pred             HHHHHHHHHHcCCCCchHHHHHHHHHhCcccccCCCCCCccccchhhhhhcccccccCcccCccCCCCCCCCCCCCCChH
Q 000072         1808 NLVDALAKLAAKPGSPESLQQLIEIVRNPAANANASSGATTAKDDKARQSKDKKAYSHTTANREDYNIPESVDPDPVGFP 1887 (2425)
Q Consensus      1808 ~tleaL~~~~~~~~~~~~l~~l~e~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1887 (2425)
                      +|+|.|+.-.     .+.++++.+++.+...                     ..+..|                ....+.
T Consensus      1457 ~tLe~la~s~-----d~~vk~f~~~~~~tm~---------------------~~v~kg----------------nKqq~n 1494 (2005)
T COG5103        1457 CTLEMLAGSS-----DPKVKDFFQKISNTMM---------------------HIVAKG----------------NKQQLN 1494 (2005)
T ss_pred             HHHHHHhccC-----ChhHHHHHHHHHHhhh---------------------hccccc----------------cccccc
Confidence            9999986432     2456777776643110                     000011                113467


Q ss_pred             HHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHcCcccCCchhHHHHHHHHHHHHHHhhhccccCCCCCCCCCccccccc
Q 000072         1888 EQVSMLFAEWYQICELPGSNDAACTRYVLQLHQNGLLKGDDMTDRFFRRLTEVSVAHCLSSEVINPGTLQSPQQSQSLSF 1967 (2425)
Q Consensus      1888 eq~~~lF~EWv~l~~~~~~~~~~~~~Fi~qL~~~giL~~~d~~~~FfR~~~E~sV~~~~~~~~~~~g~~~~~s~~~~~~f 1967 (2425)
                      ||+..+|.|||++.++...+|..-..|+.||+++|+++.+++...|||+.+|.+|..|.+..            +.+.+|
T Consensus      1495 dqi~iVf~ewv~llrn~~~nD~v~~~F~~ql~e~g~~s~~~~~~~ffk~sle~~i~aF~e~~------------pta~~y 1562 (2005)
T COG5103        1495 DQIIIVFSEWVELLRNCRFNDTVPEMFLPQLMERGDYSASLDIRSFFKVSLEHFIRAFHERI------------PTAYCY 1562 (2005)
T ss_pred             ceEEEeeHHHHHHHHhcccccccHHHHHHHHHHccCCCchHHHHHHHHhhHHHHHHHHhhcC------------Ccccce
Confidence            99999999999999999999999999999999999999999999999999999999997432            247999


Q ss_pred             hhhhHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCchHHHHHHHHHhhcCCCCCCCcchHH
Q 000072         1968 LAIDIYAKLMLSILKCCPVEQGSSKIFLLSKILTVTVKFILKDAEEKKASFNPRPYFRLFINWLLDMSSLDPVADGSNFQ 2047 (2425)
Q Consensus      1968 ~~iDA~akLi~~lvk~~~~~~~~~k~~~L~kiL~ivv~vl~~dhe~~~~~FnQRpyfRlfs~LL~el~~~d~~l~~~~~~ 2047 (2425)
                      ..||||+.||+.++++. +..+.++..|++||++++++|+.++|..+++.||+|+||||||++|+||.......++.-..
T Consensus      1563 ~~IDal~sLi~n~l~~e-G~te~T~s~~~~kii~~i~~VFae~h~~~~e~~h~~~fFrLfS~il~e~~dv~~~d~s~fv~ 1641 (2005)
T COG5103        1563 LKIDALPSLIKNRLYEE-GSTEGTVSVLFRKIIKDILFVFAEAHRKRAEFVHNYLFFRLFSRILIETLDVIDEDTSCFVN 1641 (2005)
T ss_pred             eeccchHHHHHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccHHHHHHHHHHHHhhhhhccchhhhh
Confidence            99999999999999996 44456788999999999999999999999999999999999999999998755444455567


Q ss_pred             HHHHHHHHhhhcCCCCCCchhHHHhHHhhcccchHhhhcCCCCCChHHHHHHHHHHHHhhhhhhcCCCCCchHHHHHHhH
Q 000072         2048 ILSAFANAFHVLQPLKVPAFSFAWLELVSHRSFMPKLLIGNGQKGWPYIQRLLVNLLQFLEPFLRNAELGVPVRFLYKGT 2127 (2425)
Q Consensus      2048 il~~fa~~l~~LqP~~~PgF~FaWl~LISHR~FmP~lL~~~~~~GW~~~~~LL~~Ll~Fl~~~L~~~~ls~~i~~lYkGt 2127 (2425)
                      +.+.|-++|..|||.+||||+|||++|+|||+.+|++|+.|+.+||..|..+|+++|||++  ++...++..++++|+|+
T Consensus      1642 ~~Sv~y~~f~alqP~~fPgFtfawl~llSH~~llP~vL~v~Nd~~~d~f~~~lmsflKFlD--~s~~~v~~~~~~ly~Gf 1719 (2005)
T COG5103        1642 NRSVVYSIFEALQPSRFPGFTFAWLELLSHKFLLPKVLLVNNDKINDLFSEGLMSFLKFLD--LSEEGVVLVMEALYCGF 1719 (2005)
T ss_pred             hHHHHHHHHHHcCcccCCchHHHHHHHHHhhhhhhhhhhccchhhHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHhcc
Confidence            8889999999999999999999999999999999999999999999999999999999998  78778889999999999


Q ss_pred             HHHHHHHHhcchhHHHHHhHhhhccCCCCccccccceecccCCCCCCCCCCCCCCCCCCCcCcCCCCccccchHHHHHHh
Q 000072         2128 LRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRNMRLPDPSTPNLKIDLLPEIRDPPRIFSEVDAALRAK 2207 (2425)
Q Consensus      2128 LRilLvLlHDfPeFL~~yh~~lc~~IP~~ciQLRNlILSA~P~~mrLPDPftp~LkvD~LpEi~~~P~I~~d~~~~L~~~ 2207 (2425)
                      ||+.||++||||-||+++||++...+|+.|+||||+||||||++|.+||||..||||.++|+|+..|.++.|+...|  .
T Consensus      1720 lr~iLv~~hD~P~FLit~~yql~~~~P~e~vqlrNm~lSa~Psdlt~p~Pfa~~Lkv~~~P~~k~~p~~f~d~~v~l--e 1797 (2005)
T COG5103        1720 LRTILVYLHDFPGFLITQIYQLFRRNPLECVQLRNMMLSAYPSDLTYPCPFAQGLKVQEYPHIKNFPNQFRDRIVPL--E 1797 (2005)
T ss_pred             hheeeeeeccCchHHHHHHHHHhhcCCHHHHHHHHHHHHhccccCcCCCchhcccccccChHhhhhhHHhcccccch--h
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999998887  4


Q ss_pred             hhhHHHHHHhccCCCCcchHHHHHHHccCCccccccCCcc---ccHhHHHHHHHHHHHHHHHhhhccCCcccccCCCCch
Q 000072         2208 QMRADVDDYLKTGQPGSSFLSELKQKLLLPPSEAASAGTR---YNVPLINSLVLYVGMQAIHQLQTRTSHAQSTGNNSSL 2284 (2425)
Q Consensus      2208 ~lk~~vD~yL~~r~~~~~~l~~l~~~L~~~~~~~~~~G~~---yN~~liNAlVLyVG~~Ai~~~~~~~~~~~~~~~~~~~ 2284 (2425)
                      ++++.+|  |  |.+.++.+..+.+++...-+.....|..   ++-..+-++|.|+|+.++.....              
T Consensus      1798 ~~~s~~d--L--e~~~~S~l~~~~s~~~~d~y~~k~t~~~~~~~dn~~~~~~V~h~~~es~~~~~~-------------- 1859 (2005)
T COG5103        1798 GQNSFFD--L--EACLRSALQNRTSVKVTDLYIGKNTPLWVYLIDNLNEMDAVSHTVVESIKFMIE-------------- 1859 (2005)
T ss_pred             hcccchh--h--HHHhhhhhhHHHHHHHHHhhccccCceeeeeeccHHHHHHHHHHHhhhHHHHHH--------------
Confidence            7888888  6  5666677777777665544333333322   24567889999999998653211              


Q ss_pred             hhhh-hhHHHHHHHHHHhccChhhHHHHHHHHHhhhcCCChhHHHHHHHHHHHhhccc----chhhHHHHHHHHHHHhcc
Q 000072         2285 TAFL-VSAALDIFQTLIQDLDTEGRYLFLNAAANQLRYPNNHTHYFSFVLLYLYAEAN----QEIIQEQITRVLFERLIV 2359 (2425)
Q Consensus      2285 ~~f~-~s~~~~il~~L~~~ld~EgRY~ll~aiaNQLRYPNsHT~yFS~~lL~LF~~~~----~~~IqEqItRVLLERLIv 2359 (2425)
                       .|. +|+.+.++..++..+++|.||+++.||+|||||||+||+||||++|++|.+++    +-.||||||||||||+||
T Consensus      1860 -~f~~ks~~~t~l~~~~r~g~~~~rY~ll~ai~~qlRYp~ihTy~fs~vfl~~fkS~~~N~QkL~ikE~m~t~lLeRII~ 1938 (2005)
T COG5103        1860 -RFMHKSEILTMLWIRMRAGGPPKRYFLLTAILAQLRYPEIHTYDFSRVFLKSFKSHGYNPQKLLIKEQMTTVLLERIIC 1938 (2005)
T ss_pred             -HHhccccHHHHHHHHHhcCCCchhhHHHHHHHHHhcCCCcchhHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHc
Confidence             233 35589999999999999999999999999999999999999999999998863    457999999999999999


Q ss_pred             CCCCChHHHHHHHHHhhCCCCccccCCcCcchHHHHHHHHHHHHhcCCCCCCC
Q 000072         2360 NRPHPWGLLITFIELIKNPRYNFWNQSFIRCAPEIEKLFESVARSCGGLKPVD 2412 (2425)
Q Consensus      2360 ~rPHPWGLlITFiELiKNp~Y~Fw~~~Fv~~aPEIe~lF~svarsc~~~~~~~ 2412 (2425)
                      ||||||||+|||+||+||.+||||+||||+..|||.++|+++.+++|.+..+.
T Consensus      1939 NrPH~WGl~i~FTeLlkNeD~Nf~k~Pyikr~~EI~~lfdsL~e~v~a~ssan 1991 (2005)
T COG5103        1939 NRPHPWGLLITFTELLKNEDYNFWKHPYIKRNDEICRLFDSLHEHVMAPSSAN 1991 (2005)
T ss_pred             CCCCcchhheeHHHHhcccccchhcCcccccCHHHHHHHHHHHHHhhCccccc
Confidence            99999999999999999999999999999999999999999999999765544

>KOG1831 consensus Negative regulator of transcription [Transcription]	Back alignment and domain information

>PF04054 Not1: CCR4-Not complex component, Not1; InterPro: IPR007196 The Ccr4-Not complex is a global regulator of gene expression that is conserved from yeast to human	Back alignment and domain information

>PF12842 DUF3819: Domain of unknown function (DUF3819); InterPro: IPR024557 The Ccr4-Not complex is a global regulator of gene expression that is conserved from yeast to human	Back alignment and domain information

>KOG1831 consensus Negative regulator of transcription [Transcription]	Back alignment and domain information

>smart00543 MIF4G Middle domain of eukaryotic initiation factor 4G (eIF4G)	Back alignment and domain information

>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PF02854 MIF4G: MIF4G domain; InterPro: IPR003890 This entry represents an MIF4G-like domain	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		2425
4gml_A		235	Crystal Structure Of Human Not1 Mif4g Domain Length		7e-58
4gmj_A		229	Structure Of Human Not1 Mif4g Domain Co-Crystallize		8e-58
4b89_A		249	Mif4g Domain Of The Yeast Not1 Length = 249		8e-37
4b8b_A		603	N-Terminal Domain Of The Yeast Not1 Length = 603		4e-24

>pdb|4GML|A Chain A, Crystal Structure Of Human Not1 Mif4g Domain Length = 235

Back alignment and structure

Iteration: 1

Score = 223 bits (569), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 104/214 (48%), Positives = 154/214 (71%), Gaps = 2/214 (0%) Query: 970 VQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLD 1029 +Q+KI+FI NN+S N+ K +E E +KE++ PW +QY+VMKR SIEPNFH LY FLD Sbjct: 13 IQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLD 72 Query: 1030 KVNSKALNREIVQATYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRARE 1089 + + N+ ++ TY N KVLL S+ ++ +RSLLKNLG WLG +T+ +N+ + + Sbjct: 73 TLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILHTD 132 Query: 1090 IDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSLAYQPPNPWTMAILGLLAEIYSMPN 1147 +D KSL++EAY KG ++ V+PF +K+LE S+ ++PPNPWTMAI+ +LAE++ + Sbjct: 133 LDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAIMNVLAELHQEHD 192 Query: 1148 LKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKR 1181 LK+NLKF+IEVL KNL +D+ ++ P +LLKD+ R Sbjct: 193 LKLNLKFEIEVLCKNLALDINELKPGNLLKDKDR 226

PyMOL of 4gml

>pdb|4GMJ|A Chain A, Structure Of Human Not1 Mif4g Domain Co-Crystallized With Caf1 Length = 229

Back alignment and structure

>pdb|4B89|A Chain A, Mif4g Domain Of The Yeast Not1 Length = 249

Back alignment and structure

>pdb|4B8B|A Chain A, N-Terminal Domain Of The Yeast Not1 Length = 603

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		2425
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-18
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 90.7 bits (224), Expect = 5e-18
 Identities = 109/668 (16%), Positives = 206/668 (30%), Gaps = 220/668 (32%)

Query: 5   SSTVPSQIRFLLQSLNEANADSVFRELCQFIEYGIEGSTMMLQTCMDHLNLHGTGLKNPQ 64
           S    S    L  +L     + V +    F+E  +  +   L   M  +    T  + P 
Sbjct: 57  SKDAVSGTLRLFWTLLSKQEEMVQK----FVEEVLRINYKFL---MSPIK---TEQRQPS 106

Query: 65  LESVVASVFKYIMDKP-NFSTVFSQ-SV----KITEINEQLLENLSDVLNLSLPERIGIG 118
           + + +   +    D+  N + VF++ +V       ++ + LLE L    N+ +   +G G
Sbjct: 107 MMTRM---YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLE-LRPAKNVLIDGVLGSG 162

Query: 119 ---LALS--DSENLDALMCGKNF------------CMAQIERLCANPVPMNSAEQIQNII 161
              +AL    S  +   M  K F             +  +++L     P  ++       
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR------ 216

Query: 162 MFLQRSSDLSKHVDSLMQILS-LLQSKDHTQFVLNPVLPDELHDATSLRDLDLFHECRDD 220
                SS++   + S+   L  LL+SK +   +L  VL   + +A +    +L       
Sbjct: 217 --SDHSSNIKLRIHSIQAELRRLLKSKPYENCLL--VL-LNVQNAKAWNAFNL------- 264

Query: 221 DFDDILAEMEKEMSMGDVMNELGYGCSADASQCKEILSLFTPLT--EITLSRILGAIART 278
                                           CK IL     LT     ++  L A   T
Sbjct: 265 -------------------------------SCK-IL-----LTTRFKQVTDFLSAATTT 287

Query: 279 HAGLEDNQNTFST------FTLALGCSTMSDLP-------PLSSWNVDVLVKAIKQLAPN 325
           H  L+ +  T +           L C    DLP       P     + ++ ++I+     
Sbjct: 288 HISLDHHSMTLTPDEVKSLLLKYLDCRP-QDLPREVLTTNPRR---LSIIAESIRD-GLA 342

Query: 326 T--NWIRV------------VENLDYEGFYIPTE-----EAFSFFM-SVYKYACQEPFPL 365
           T  NW  V            +  L+      P E     +  S F  S          P 
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLE------PAEYRKMFDRLSVFPPSA-------HIPT 389

Query: 366 HAVCGSVWKNTEGQLSFLRYAVASPPEVFTFAHSARQLPYVDAVPGLKLQSGQANHAWLC 425
             +   +W +                +V    +   +         L ++          
Sbjct: 390 ILLS-LIWFDVIKS------------DVMVVVNKLHKY-------SL-VEKQPKESTISI 428

Query: 426 LDL-LDVLCQLSEMG--HASFARSMLE-Y--PLKQCPEMLLLGMA------HINTAYNLI 473
             + L++  +L      H    RS+++ Y  P     + L+          HI   ++L 
Sbjct: 429 PSIYLELKVKLENEYALH----RSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI--GHHLK 482

Query: 474 QYEVS--FAVFPMI----------IKSTMSNGMILHIWHVNPNIVLRGFVDAQNMEPDCT 521
             E      +F M+          I+   +       W+     +L      +  +P   
Sbjct: 483 NIEHPERMTLFRMVFLDFRFLEQKIRHDSTA------WNA-SGSILNTLQQLKFYKP--- 532

Query: 522 IRILEICQEL-KILSSVLEMIPSPFAIRLAVIASQKELVDLEKWLSINLSTYKDVFFEEC 580
             I +   +  ++++++L+     F  ++       +  DL   L I L    +  FEE 
Sbjct: 533 -YICDNDPKYERLVNAILD-----FLPKIEENLICSKYTDL---LRIALMAEDEAIFEEA 583

Query: 581 LKFVKEVQ 588
               K+VQ
Sbjct: 584 H---KQVQ 588

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		2425
4gmj_A		229	CCR4-NOT transcription complex subunit 1; mRNA dec	100.0
4b89_A		249	General negative regulator of transcription subun;	100.0
4b8b_A		603	General negative regulator of transcription subun;	100.0

>4gmj_A CCR4-NOT transcription complex subunit 1; mRNA decay, deadenylase, RNA bindin; HET: GOL; 2.70A {Homo sapiens} PDB: 4gml_A	Back alignment and structure

Probab=100.00  E-value=6e-81  Score=709.07  Aligned_cols=217  Identities=48%  Similarity=0.862  Sum_probs=214.5

Q ss_pred             CChhhhHhHhhhhhcCCcccHHHHHHHHHHHhhhcchhHhHHHHHhhhcccCCcchHHHHHHHHHhCChhHHHHHHHHHH
Q 000072          966 PASEVQDKISFIINNISALNVEAKAKEFTEILKEQYYPWFAQYMVMKRASIEPNFHDLYLKFLDKVNSKALNREIVQATY 1045 (2425)
Q Consensus       966 P~e~vqDKI~FIiNNlS~~Nl~~K~~Elk~~L~~~y~~WFA~YLV~kRasiEPN~H~LYl~fl~~l~~~~L~~~Vl~eTy 1045 (2425)
                      ++|+|||||+|||||+|++|+++|++|+|++|+++|++|||+|||++|||+|||||+||++|+++++++.|+++|+++||
T Consensus         3 ~de~v~dki~Fi~NNls~~N~~~k~~elk~~l~~~y~~Wfa~YLV~~Ras~EpN~h~lY~~fl~~l~~~~l~~~vl~~T~   82 (229)
T 4gmj_A            3 LEENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPNFHSLYSNFLDTLKNPEFNKMVLNETY   82 (229)
T ss_dssp             SCHHHHHHHHHHHHSCCSSTHHHHHHHHHHHSCGGGHHHHHHHHHHHTTTTCGGGHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred             CcHHhhhhheeehhcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHhChHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcccccccChHHHHHHHHhhhhhhhhhhhcCcccccCCCChhhHHHHHHhcCc--eEEEechhhhcccccCCCc
Q 000072         1046 ENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGL--MIAVIPFTSKILEPCQSSL 1123 (2425)
Q Consensus      1046 ~~i~~LL~Se~~~~ss~eRslLKNLGsWLG~iTLarNkPI~~k~ld~K~LL~eaY~~g~--L~~VIPFV~KVLe~~~~S~ 1123 (2425)
                      ++|++||+|++++.+++||++|||||+|||+|||||||||+||+||+|+||+|||++|.  |++|||||||||++|++|+
T Consensus        83 ~~i~~LL~s~~~~~~~~eR~~LKNLG~WLG~lTLarnkPI~~~~l~~K~LL~eay~~g~~rL~~viPFVcKvLe~~~~S~  162 (229)
T 4gmj_A           83 RNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSV  162 (229)
T ss_dssp             HHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTGGGTCCCCTTTCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHTTTTCT
T ss_pred             HHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHccCCCchhcccCHHHHHHHHHHCCCceEEEeehhHHHHHHhcccCC
Confidence            99999999999999999999999999999999999999999999999999999999995  9999999999999999999


Q ss_pred             cccCCCccHHHHHHHHHHHhcCCcccchhHHHHHHHHhhcCCCccccccccccccchhh
Q 000072         1124 AYQPPNPWTMAILGLLAEIYSMPNLKMNLKFDIEVLFKNLGVDMKDITPTSLLKDRKRE 1182 (2425)
Q Consensus      1124 vFkPPNPWtm~IL~lL~Ely~~~~LKlnLKFEIEVL~K~L~ld~~dieps~~L~~r~~~ 1182 (2425)
                      ||||||||||+||++|+|||++|+||+|||||||||||+|++|++||+|+++|++|++.
T Consensus       163 iFkPPNPW~~~IL~lL~Ely~~~~lKlnlkFEIEvLfk~l~~~~~~i~ps~~l~~~~~~  221 (229)
T 4gmj_A          163 VFRPPNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRL  221 (229)
T ss_dssp             TTSTTCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTTCCGGGSCCCSGGGCSTTG
T ss_pred             cCCCCChhHHHHHHHHHHHHhCccchhhHHHHHHHHHHHcCCChhhcCchhhhhccchh
Confidence            99999999999999999999999999999999999999999999999999999999874

PyMOL of 4gmj

>4b89_A General negative regulator of transcription subun; 1.50A {Saccharomyces cerevisiae S288C} PDB: 4b8a_A 4b8c_B	Back alignment and structure

>4b8b_A General negative regulator of transcription subun; 2.80A {Saccharomyces cerevisiae S288C}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00