Citrus Sinensis ID: 000079
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 2396 | 2.2.26 [Sep-21-2011] | |||||||
| O23372 | 2335 | Probable histone-lysine N | yes | no | 0.925 | 0.949 | 0.568 | 0.0 | |
| Q9Y7R4 | 920 | Histone-lysine N-methyltr | yes | no | 0.047 | 0.125 | 0.361 | 6e-14 | |
| Q18221 | 1507 | Probable histone-lysine N | yes | no | 0.048 | 0.077 | 0.372 | 4e-13 | |
| Q4PB36 | 1468 | Histone-lysine N-methyltr | N/A | no | 0.045 | 0.074 | 0.335 | 2e-12 | |
| Q99MY8 | 2958 | Histone-lysine N-methyltr | yes | no | 0.054 | 0.043 | 0.318 | 2e-12 | |
| Q9NR48 | 2969 | Histone-lysine N-methyltr | yes | no | 0.054 | 0.043 | 0.318 | 2e-12 | |
| Q9VYD1 | 2313 | Probable histone-lysine N | yes | no | 0.053 | 0.055 | 0.335 | 4e-12 | |
| Q4I5R3 | 1263 | Histone-lysine N-methyltr | yes | no | 0.050 | 0.095 | 0.321 | 1e-11 | |
| Q2GWF3 | 1076 | Histone-lysine N-methyltr | N/A | no | 0.049 | 0.109 | 0.340 | 2e-11 | |
| O14026 | 798 | Histone-lysine N-methyltr | no | no | 0.056 | 0.169 | 0.303 | 3e-11 |
| >sp|O23372|ATXR3_ARATH Probable histone-lysine N-methyltransferase ATXR3 OS=Arabidopsis thaliana GN=ATXR3 PE=1 SV=2 | Back alignment and function desciption |
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Score = 2665 bits (6908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1428/2511 (56%), Positives = 1764/2511 (70%), Gaps = 293/2511 (11%)
Query: 1 MGDGGVACMPLQQQQQHNSIMERFPISDKTTICVGNSSNNSNKTNNNSISNNNDNKTNND 60
M DGGVACMPL +IME+ PI +KTT+C GN S KT
Sbjct: 1 MSDGGVACMPLL------NIMEKLPIVEKTTLCGGNES-----------------KTAAT 37
Query: 61 SSNNNGSSSSKNNETNKSNVKKNGVSTKTVRKKIVK-IKKVIAVKKKEVQKNSGSS---- 115
+ N + S ++K E+ +N K + S +K+IVK I+KV+ + K+ QK +
Sbjct: 38 TENGHTSIATKVPESQPAN-KPSASSQPVKKKRIVKVIRKVVKRRPKQPQKQADEQLKDQ 96
Query: 116 ---------------------KSNNNGENIDNKNVENGGAVGEVVTVDKENLKNEEVEEG 154
KS G K VENGG G +EVEEG
Sbjct: 97 PPSQVVQLPAESQLQIKEQDKKSEFKGGTSGVKEVENGGDSG----------FKDEVEEG 146
Query: 155 ELGTLKW----ENGEFVQPEKSQPQSQLQSQSKQIEKGEIIV------------------ 192
ELGTLK ENGE + P KS Q +IEKGEI+
Sbjct: 147 ELGTLKLHEDLENGE-ISPVKSL-------QKSEIEKGEIVGESWKKDEPTKGEFSHLKY 198
Query: 193 ---------FSS-KCRRGETEKGESGLWRGNKDDIEKGEFIPDRWHK-EVVKDEYGYSKS 241
FS+ K +G E+ E WR D+IEKGEFIPDRW K + KD++ Y +S
Sbjct: 199 HKGYVERRDFSADKNWKGGKEEREFRSWRDPSDEIEKGEFIPDRWQKMDTGKDDHSYIRS 258
Query: 242 RR----------YDYKLERTPPSGKYSGEDVYRRKEFDRSGSQHSKSSSRWESGQERNVR 291
RR Y+Y+ ERTPP G++ ED+Y ++EF SG +R R
Sbjct: 259 RRNGVDREKTWKYEYEYERTPPGGRFVNEDIYHQREF--------------RSGLDRTTR 304
Query: 292 ISSKIVDDEGLYKGEHNNGKNHGREYFH-GNRFKRHGTDSDSGDRKY-YGDYGDFAGLKS 349
ISSKIV +E L+K E+NN N +EY GNR KRHG + DS +RK+ Y DYGD+ K
Sbjct: 305 ISSKIVIEENLHKNEYNNSSNFVKEYSSTGNRLKRHGAEPDSIERKHSYADYGDYGSSKC 364
Query: 350 RRLSDDYNSRSVHSEHYSRHSVEKFHRNSSSSRISSLDKYSSRHHEPSLSSRVIYDRHGR 409
R+LSDD SRS+HS+HYS+HS E+ +R+S S+ SSL+KY +H + S ++ D+HG
Sbjct: 365 RKLSDDC-SRSLHSDHYSQHSAERLYRDSYPSKNSSLEKYPRKHQDASFPAKAFSDKHGH 423
Query: 410 SPSHSDRSPHDRGRYYDHRDRSPSRHDRSPYTRDRSPYTFDRSPYSRERSPYNRDRSPYA 469
SPS SD SPHDR RY+++R DRSPY+RERSPY ++S +A
Sbjct: 424 SPSRSDWSPHDRSRYHENR---------------------DRSPYARERSPYIFEKSSHA 462
Query: 470 REKSPYDRSRHYDHRNRSPFSAERSPQDRARFHDRSDRTPNYLERSPLHRSRPNNHREAS 529
R++SP DR H RSP +E SP DR+R DR D PN++E + R+R N HRE S
Sbjct: 463 RKRSPRDRRHH--DYRRSPSYSEWSPHDRSRPSDRRDYIPNFMEDTQSDRNRRNGHREIS 520
Query: 530 SKTGASEKRNARYDSKGHEDKLGPKDSNARCSRSSAKESQDKSNVQDLNVSDEKTANCES 589
K+G E+R+ + ++ E K K+SN + S SS+KE Q K+ + + ++ EK + C+S
Sbjct: 521 RKSGVRERRDCQTGTE-LEIKHKYKESNGKESTSSSKELQGKNILYNNSLLVEKNSVCDS 579
Query: 590 HKEEQPQSSSVDCKEPPQVDGPPLEELVSMEEDMDICDTPPHVPAVTDSSVGKWFYLDHC 649
K P ++ KEP QV P EEL SME DMDICDTPPH P +DSS+GKWFYLD+
Sbjct: 580 SKIPVPCATG---KEPVQVGEAPTEELPSMEVDMDICDTPPHEPMASDSSLGKWFYLDYY 636
Query: 650 GMECGPSRLCDLKTLVEEGVLVSDHFIKHLDSNRWETVENAVSPLVTVNFPSITSDSVTQ 709
G E GP+RL DLK L+E+G+L SDH IKH D+NRW
Sbjct: 637 GTEHGPARLSDLKALMEQGILFSDHMIKHSDNNRW------------------------- 671
Query: 710 LVSPPEASGNLLADTGDTA------QSTGEEFPVTLQSQCCPDGSAAAAESSEDLHIDVR 763
LV+PPEA GNLL D DT Q G+ P + + PDG E+ ED ID+R
Sbjct: 672 LVNPPEAPGNLLEDIADTTEAVCIEQGAGDSLPELVSVRTLPDGKEIFVENREDFQIDMR 731
Query: 764 VGALLDGFTVIPGKEIETLGE---------------------------------LKSGDK 790
V LLDG T+ PG+E ETLGE KS D
Sbjct: 732 VENLLDGRTITPGREFETLGEALKVNVEFEETRRCVTSEGVVGMFRPMKRAIEEFKSDD- 790
Query: 791 DHWVVCFDSDE---WFSGRWSCKGGDWKRNDEAAQDRCSRKKQVLNDGFPLCQMPKSGYE 847
+SDE WFSGRWSCKGGDW R DEA+QDR +KK VLNDGFPLC M KSG+E
Sbjct: 791 ---AYGSESDEIGSWFSGRWSCKGGDWIRQDEASQDRYYKKKIVLNDGFPLCLMQKSGHE 847
Query: 848 DPRWNQKDDLYYPSHSRRLDLPPWAYACPDERNDGSGGSRSTQSKLAAVRGVKGTMLPVV 907
DPRW+ KDDLYYP S RL+LP WA++ DERN RGVK ++L VV
Sbjct: 848 DPRWHHKDDLYYPLSSSRLELPLWAFSVVDERNQ--------------TRGVKASLLSVV 893
Query: 908 RINACVVNDHGSFVSEPRSKVRAKERHSSRSARSYSSANDVRRSSAESDSHSKARNNQDS 967
R+N+ VVND + +PR+KVR+KER SR AR +++D +R S ES S S A QDS
Sbjct: 894 RLNSLVVNDQVPPIPDPRAKVRSKERCPSRPARPSPASSDSKRESVESHSQSTASTGQDS 953
Query: 968 QGSWKSIACINTPKDRLCTVDDLQLQLGEWYYLDGAGHERGPSSFSELQVLVDQGCIQKH 1027
QG WK+ +NTP+DRLCTVDDLQL +G+W+Y DGAG E+GP SFSELQ LV++G I+ H
Sbjct: 954 QGLWKTDTSVNTPRDRLCTVDDLQLHIGDWFYTDGAGQEQGPLSFSELQKLVEKGFIKSH 1013
Query: 1028 TSVFRKFDKVWVPLTFATETSASTVRNHGEKIMPSGDSSGLPPTQSQDAVLGESNNNVNS 1087
+SVFRK DK+WVP+T T++ + G+ GL +++QD E + ++NS
Sbjct: 1014 SSVFRKSDKIWVPVTSITKSPETIAMLRGKTPALPSACQGLVVSETQDFKYSEMDTSLNS 1073
Query: 1088 NAFHTMHPQFIGYTRGKLHELVMKSYKNREFAAAINEVLDPWINAKQPKKETE-HVYRKS 1146
FH +HPQF+GY RGKLH+LVMK++K+R+F+AAIN+V+D WI+A+QPKKE+E ++Y+ S
Sbjct: 1074 --FHGVHPQFLGYFRGKLHQLVMKTFKSRDFSAAINDVVDSWIHARQPKKESEKYMYQSS 1131
Query: 1147 EGDTRAGKRARLLVRESDGDEETEEELQTIQDESTFEDLCGDASFPGEESASSAIESGGW 1206
E ++ KRARL+ ES D E E+ +DE TFEDLCGD +F E + S+ W
Sbjct: 1132 ELNSCYTKRARLMAGESGEDSEMEDTQMFQKDELTFEDLCGDLTFNIEGNRSAGTVGIYW 1191
Query: 1207 GLLDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAVRFYKGISRQVDLSSVGPNCTDSLI 1266
GLLDGH LA VFH LR D+KSLAFAS+TCRHW+A + YK ISRQVDLSS+GP+CTDS +
Sbjct: 1192 GLLDGHALARVFHMLRYDVKSLAFASMTCRHWKATINSYKDISRQVDLSSLGPSCTDSRL 1251
Query: 1267 RKTLNAFDKEKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCGQFGELALKFPNIN 1326
R +N ++KEK++SI+LVGCTN+T+ MLEEIL+ P +SS+DI GC QFG+L + + N++
Sbjct: 1252 RSIMNTYNKEKIDSIILVGCTNVTASMLEEILRLHPRISSVDITGCSQFGDLTVNYKNVS 1311
Query: 1327 WVKSQKSRGAKFNDSRSKIRSLKQITEKSSSAPKSKGLGDDMDDFGDLKDYFESVDKRDS 1386
W++ Q +R + + S+IRSLKQ T+ KSKGLG D DDFG+LKDYF+ V+KRDS
Sbjct: 1312 WLRCQNTRSGELH---SRIRSLKQTTD----VAKSKGLGGDTDDFGNLKDYFDRVEKRDS 1364
Query: 1387 ANQSFRRSLYQRSKVFDARKSSSILSRDARMRRWSIKKSENGYKRMEEFLASSLKEIMRV 1446
ANQ FRRSLY+RSK++DAR+SS+ILSRDAR+RRW+IKKSE+GYKR+EEFLASSL+ IM+
Sbjct: 1365 ANQLFRRSLYKRSKLYDARRSSAILSRDARIRRWAIKKSEHGYKRVEEFLASSLRGIMKQ 1424
Query: 1447 NTFEFFVPKVAEIEGRMKKGYYISHGLGSVKDDISRMCRDAIKAKNRGSAGDMNRITTLF 1506
NTF+FF KV++IE +MK GYY+SHGL SVK+DISRMCR+AIK
Sbjct: 1425 NTFDFFALKVSQIEEKMKNGYYVSHGLRSVKEDISRMCREAIK----------------- 1467
Query: 1507 IQLATRLEQGAKSSYYEREEMMKSWKDESPAGLYSATSKYKKKLSKMVSERKYMNRSNGT 1566
+E+MKSW+D S GL SAT KY KKLSK V+E+KYM+R++ T
Sbjct: 1468 ------------------DELMKSWQDGS--GLSSAT-KYNKKLSKTVAEKKYMSRTSDT 1506
Query: 1567 SLANGDFDYGEYASDREIRKRLSKLNRKSLDSGSETSDDLDGSSEDGKSDSESTVSDTDS 1626
NG DYGEYASDREI++RLSKLNRKS S S+TS + S++GKSD+ S+ S ++S
Sbjct: 1507 FGVNGASDYGEYASDREIKRRLSKLNRKSFSSESDTSSE---LSDNGKSDNYSSASASES 1563
Query: 1627 DMDFRSDGRARESRGAGDFTTDEGLD-FSDDREWGARMTKASLVPPVTRKYEVIDQYVIV 1685
+ D RS+GR+++ R FT D+ D +++REWGARMTKASLVPPVTRKYEVI++Y IV
Sbjct: 1564 ESDIRSEGRSQDLRIEKYFTADDSFDSVTEEREWGARMTKASLVPPVTRKYEVIEKYAIV 1623
Query: 1686 ADEEDVRRKMRVSLPEDYAEKLNAQKNGSEELDMELPEVKDYKPRKQLGDQVFEQEVYGI 1745
ADEE+V+RKMRVSLPEDY EKLNAQ+NG EELDMELPEVK+YKPRK LGD+V EQEVYGI
Sbjct: 1624 ADEEEVQRKMRVSLPEDYGEKLNAQRNGIEELDMELPEVKEYKPRKLLGDEVLEQEVYGI 1683
Query: 1746 DPYTHNLLLDSMPDELDWNLLEKHLFIEDVLLRTLNKQVRHFTGTGNTPMMYPLQPVIEE 1805
DPYTHNLLLDSMP ELDW+L +KH FIEDV+LRTLN+QVR FTG+G+TPM++PL+PVIEE
Sbjct: 1684 DPYTHNLLLDSMPGELDWSLQDKHSFIEDVVLRTLNRQVRLFTGSGSTPMVFPLRPVIEE 1743
Query: 1806 IEKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLG 1865
+++ A ++CD+RTMKMC+G+LK ++SR DDKYV+YRKGLGVVCNKEGGFGE+DFVVEFLG
Sbjct: 1744 LKESAREECDIRTMKMCQGVLKEIESRSDDKYVSYRKGLGVVCNKEGGFGEEDFVVEFLG 1803
Query: 1866 EVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASR 1925
EVYPVWKWFEKQDGIRSLQ+N DPAPEFYNIYLERPKGDADGYDLVVVDAMH ANYASR
Sbjct: 1804 EVYPVWKWFEKQDGIRSLQENKTDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASR 1863
Query: 1926 ICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTESKEEYEASVCLCGSQ 1985
ICHSCRPNCEAKVTAVDGHYQIGIY+VR I YGEEITFDYNSVTESKEEYEASVCLCGSQ
Sbjct: 1864 ICHSCRPNCEAKVTAVDGHYQIGIYSVRAIEYGEEITFDYNSVTESKEEYEASVCLCGSQ 1923
Query: 1986 VCRGSYLNLTGEGAFEKVLKELHGLLDRHQLMLEACELNSVSEEDYLELGRAGLGSCLLG 2045
VCRGSYLNLTGEGAF+KVLK+ HGLL+RH+LMLEAC LNSVSEEDYLELGRAGLGSCLLG
Sbjct: 1924 VCRGSYLNLTGEGAFQKVLKDWHGLLERHRLMLEACVLNSVSEEDYLELGRAGLGSCLLG 1983
Query: 2046 GLPNWVVAYSARLVRFINLERTKLPEEILRHNLEEKRKYFSDICLEVEKSDAEVQAEGVY 2105
GLP+W++AYSARLVRFIN ERTKLPEEIL+HNLEEKRKYFSDI L+VEKSDAEVQAEGVY
Sbjct: 1984 GLPDWMIAYSARLVRFINFERTKLPEEILKHNLEEKRKYFSDIHLDVEKSDAEVQAEGVY 2043
Query: 2106 NQRLQNLAVTLDKVRYVMRCVFGDPKKAPPPVERLSPEETVSFLWKGEGSLVEELIQCMA 2165
NQRLQNLAVTLDKVRYVMR VFGDPK APPP+ERL+PEETVSF+W G+GSLV+EL+Q ++
Sbjct: 2044 NQRLQNLAVTLDKVRYVMRHVFGDPKNAPPPLERLTPEETVSFVWNGDGSLVDELLQSLS 2103
Query: 2166 PHVEEDVLNDLKSKIQAHDPSGSEDIQRELRKSLLWLRDEVRNLPCTYKCRHDAAADLIH 2225
PH+EE LN+L+SKI HDPSGS D+ +EL++SLLWLRDE+R+LPCTYKCR+DAAADLIH
Sbjct: 2104 PHLEEGPLNELRSKIHGHDPSGSADVLKELQRSLLWLRDEIRDLPCTYKCRNDAAADLIH 2163
Query: 2226 IYAYTKCFFRVQEYKAFTSPPVYISPLDLGPKYADKLGADLQVYRKTYGENYCLGQLIFW 2285
IYAYTKCFF+V+EY++F S PV+ISPLDLG KYADKLG ++ YRKTYGENYCLGQLI+W
Sbjct: 2164 IYAYTKCFFKVREYQSFISSPVHISPLDLGAKYADKLGESIKEYRKTYGENYCLGQLIYW 2223
Query: 2286 HIQTNADPDCTLARASRGCLSLPDIGSFYAKVQKPSRHRVYGPKTVRFMLSRMEKQPQRP 2345
+ QTN DPD TL +A+RGCLSLPD+ SFYAK QKPS+HRVYGPKTV+ M+S+M KQPQRP
Sbjct: 2224 YNQTNTDPDLTLVKATRGCLSLPDVASFYAKAQKPSKHRVYGPKTVKTMVSQMSKQPQRP 2283
Query: 2346 WPKDRIWAFKSSPRIFGSPMLDSSL-TGCPLDREMVHWLKHRPAIFQAMWD 2395
WPKD+IW FKS+PR+FGSPM D+ L LDRE++ WL++R +FQA WD
Sbjct: 2284 WPKDKIWTFKSTPRVFGSPMFDAVLNNSSSLDRELLQWLRNRRHVFQATWD 2334
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Histone methyltransferase. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 3 |
| >sp|Q9Y7R4|SET1_SCHPO Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q18221|SET2_CAEEL Probable histone-lysine N-methyltransferase set-2 OS=Caenorhabditis elegans GN=set-2 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q4PB36|SET1_USTMA Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SET1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q99MY8|ASH1L_MOUSE Histone-lysine N-methyltransferase ASH1L OS=Mus musculus GN=Ash1l PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9NR48|ASH1L_HUMAN Histone-lysine N-methyltransferase ASH1L OS=Homo sapiens GN=ASH1L PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9VYD1|C1716_DROME Probable histone-lysine N-methyltransferase CG1716 OS=Drosophila melanogaster GN=Set2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q4I5R3|SET1_GIBZE Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=SET1 PE=3 SV=2 | Back alignment and function description |
|---|
| >sp|Q2GWF3|SET1_CHAGB Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970) GN=SET1 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|O14026|SET2_SCHPO Histone-lysine N-methyltransferase, H3 lysine-36 specific OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=set2 PE=1 SV=1 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2396 | ||||||
| 224132582 | 2476 | SET domain protein [Populus trichocarpa] | 0.973 | 0.941 | 0.656 | 0.0 | |
| 255549293 | 2430 | huntingtin interacting protein, putative | 0.910 | 0.897 | 0.689 | 0.0 | |
| 359485692 | 2367 | PREDICTED: probable histone-lysine N-met | 0.917 | 0.928 | 0.690 | 0.0 | |
| 449453666 | 2336 | PREDICTED: probable histone-lysine N-met | 0.937 | 0.961 | 0.627 | 0.0 | |
| 449493199 | 2336 | PREDICTED: probable histone-lysine N-met | 0.937 | 0.961 | 0.627 | 0.0 | |
| 356515246 | 2325 | PREDICTED: probable histone-lysine N-met | 0.908 | 0.935 | 0.653 | 0.0 | |
| 356544844 | 2331 | PREDICTED: probable histone-lysine N-met | 0.942 | 0.968 | 0.629 | 0.0 | |
| 356547055 | 2351 | PREDICTED: probable histone-lysine N-met | 0.940 | 0.958 | 0.625 | 0.0 | |
| 297739332 | 2199 | unnamed protein product [Vitis vinifera] | 0.868 | 0.945 | 0.630 | 0.0 | |
| 186511821 | 2335 | putative histone-lysine N-methyltransfer | 0.925 | 0.949 | 0.568 | 0.0 |
| >gi|224132582|ref|XP_002327831.1| SET domain protein [Populus trichocarpa] gi|222837240|gb|EEE75619.1| SET domain protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 3197 bits (8289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1668/2540 (65%), Positives = 1939/2540 (76%), Gaps = 208/2540 (8%)
Query: 1 MGDGGVACMPLQQQQQHNSIMERFPISDK------------TTICVGNSSNNSNKT---- 44
MG GGVACMPLQ + + ERFP+ ++ TT C G + NSN
Sbjct: 1 MGSGGVACMPLQHGSNNIIMEERFPVQEQPTAAAAAMTTTATTACGGGKTVNSNSNISSA 60
Query: 45 -----NNNSISNNNDNKTNNDSSNN----------------------------------- 64
NN S + DN N SSN
Sbjct: 61 DNDNNNNGSSGDKKDNGKVNASSNGVTGKLKRVKRIIKVKKVVRRVVLGEKKGVGLDKAV 120
Query: 65 NGSSSSKNNETNKSNVKKNGVSTKTVRKKIVKIKKVIAVKKKEVQKN-SGSSKSNNNGEN 123
G+ S + E K++G+ T+ K++ KK +KK++ K + K + +
Sbjct: 121 KGAGGSGSKEVAVLEKKESGLKTEEKSKEVAAEKKESGLKKEDKSKEVAAEKKESGLKSS 180
Query: 124 IDNKNVENGGAVGE---VVTVDKENLKNEEVEEGELGTLKW------ENGEFVQPEKSQP 174
+K VENG +G V N+K EEVEEGELGTL+W ENGEFV P +P
Sbjct: 181 SGSKTVENGDGLGSGDSKVQSGSNNIK-EEVEEGELGTLRWPSKGEIENGEFV-PTPEKP 238
Query: 175 QSQLQSQSKQIEKGEIIVFSSKCRRGETEKGE---SGLWRGN---KDDIEKGEFIPDRWH 228
+ +IE+GEI S K ++G+ EKGE WR +D+IEKGEFIPDRW+
Sbjct: 239 RRS------EIERGEI--GSGKWKKGDIEKGEIVSGNKWRKGEAVRDEIEKGEFIPDRWN 290
Query: 229 KEVVKDEYGYSKSR-RYDYKLERTPPSGKYSGEDVYRRKEFDRSGSQHSKSSSRWESGQE 287
+KDEYGY+KSR R+D ERTPPSGKYS EDVYRRKE RSG RWESGQE
Sbjct: 291 ---IKDEYGYNKSRGRHDMSSERTPPSGKYSSEDVYRRKELSRSGGM------RWESGQE 341
Query: 288 RNVRISSKIVDDEGLYKGEHNNGKNHGREYFHGNRFKRHGTDSDSGDRKYYGDYGDFAGL 347
R+ RISSKIVD+EG YK E++NGK+H RE+ GNR KRH TDSD+ +RKYYGDY A
Sbjct: 342 RSTRISSKIVDEEGSYKSEYSNGKSHEREHASGNRLKRHVTDSDNTERKYYGDY---AIS 398
Query: 348 KSRRLSDDYNSRSVHSEHYSRHSVEKFHRNSSSSRISSLDKYSSRHHEPSLSSRVIYDRH 407
KSRRLS+D SR +SEHYSRHSVE+F+++SS SR+SS DKYSSRHHEP+LSS+V+YDRH
Sbjct: 399 KSRRLSED-GSRYAYSEHYSRHSVERFYKSSSYSRVSSSDKYSSRHHEPTLSSKVVYDRH 457
Query: 408 GRSPSHSDRSPHDRGRYYDHRDRSPSR--------------HDRSPYTRDRSPYT----- 448
SHSDRSPHDR RYYDHRDRSP R H+RSPY R+RSPY
Sbjct: 458 ----SHSDRSPHDRPRYYDHRDRSPIRYEKSPYGREKTPFGHERSPYGRERSPYGRERSP 513
Query: 449 ---------FDRSPYSRERSPYNRDRSPYAREKSPYDRSRHYDHRNRSPFSAERSPQDRA 499
DRSPY RE+SPY R+RSPY EKSPYDRS + +HR RSP ERSPQDR
Sbjct: 514 YWRDRSPDGHDRSPYGREKSPYGRERSPYVLEKSPYDRSSYNEHRKRSPAYFERSPQDRT 573
Query: 500 RFHDRSDRTPNYLERSPLHRSRPNNHREASSKTGASEKRNARYDSKGHEDKLGPKDSNAR 559
R HDRSDRTP+YLERSP R+RP NHREAS K A EKR+++Y +K +DK+ KD +
Sbjct: 574 RHHDRSDRTPSYLERSPHDRARPTNHREASRKGAAHEKRSSQYGNKKQDDKISQKDPAVK 633
Query: 560 CSRSSAKESQDKSNVQDLNVSDEKTANCESHKEEQPQSSSVDCKEPPQVDGPPLEELVSM 619
+ SAKESQDKS+V +L+ DEK + E+ EE+ +S ++ KE P+VDGPP EEL SM
Sbjct: 634 DTELSAKESQDKSSVHNLDGLDEKNTSSETRLEEKSESPVINAKESPKVDGPPPEELQSM 693
Query: 620 EEDMDICDTPPHVPAVTDSSVGKWFYLDHCGMECGPSRLCDLKTLVEEGVLVSDHFIKHL 679
EEDMDICDTPPHVP V D+S G+WFYLDH G+ECGPS+LC+LK LV+EG+L+SDHFIKHL
Sbjct: 694 EEDMDICDTPPHVPVVADTSTGRWFYLDHFGVECGPSKLCELKALVDEGILMSDHFIKHL 753
Query: 680 DSNRWETVENAVSPLVTVNFPSITSDSVTQLVSPPEASGNLLADTGDTAQS---TGEEFP 736
DS+RW T+ENAVSPLVTVNFPS+ D +TQLVSPPEA GNLLADTGD QS GE P
Sbjct: 754 DSDRWLTIENAVSPLVTVNFPSVVPDVITQLVSPPEAPGNLLADTGDIVQSCSQIGEGVP 813
Query: 737 VTL-QSQCCPDGSAAAAESSEDLHIDVRVGALLDGFTVIPGKEIETLGEL---------- 785
L Q CP+ SA A+E EDL ID RVGALL+GF+V+PG EIET+G
Sbjct: 814 GNLLQPLVCPNHSAVASEPLEDLQIDERVGALLEGFSVVPGSEIETVGGFAWYLASTAEQ 873
Query: 786 -------------------------KSGDKDH-WVVCFDSDEWFSGRWSCKGGDWKRNDE 819
DKD + DS +WFSGRWSCKGGDWKRNDE
Sbjct: 874 QDQNSNELLGHSDLITKEAVEAWPGSLADKDDGFASSVDSADWFSGRWSCKGGDWKRNDE 933
Query: 820 AAQDRCSRKKQVLNDGFPLCQMPKSGYEDPRWNQKDDLYYPSHSRRLDLPPWAYACPDER 879
+ QDR +R+K VLNDGFPLC M KSG EDPRW +KDDLY+PS SR+LDLPPWA++ DER
Sbjct: 934 SVQDRFTRRKVVLNDGFPLCHMTKSGCEDPRWQRKDDLYFPSQSRKLDLPPWAFSSTDER 993
Query: 880 NDGSGGSRSTQSKLAAVRGVKGTMLPVVRINACVVNDHGSFVSEPRSKVRAKERHSSRSA 939
ND G S+ST +K RGVKGT+LPVVRINACVV DH VSE R+KVR K+R+ SR+A
Sbjct: 994 NDTGGVSKSTLNKPPITRGVKGTVLPVVRINACVVQDH---VSETRTKVRGKDRYHSRAA 1050
Query: 940 RSYSSANDVRRSSAESDSHSKARNNQDSQGSWKSIACINTPKDRLCTVDDLQLQLGEWYY 999
R++S+ NDV+RSS ESDS SK N+ DS G WKS A +NTPKD LCT DDLQL LGEWYY
Sbjct: 1051 RTHSATNDVKRSSVESDSQSKVVNDPDSHGCWKSTAPLNTPKDCLCTADDLQLNLGEWYY 1110
Query: 1000 LDGAGHERGPSSFSELQVLVDQGCIQKHTSVFRKFDKVWVPLTFATETSASTVRNHGEKI 1059
LDGAGHE+GPSSFSELQ L D G IQK++SVFRKFD+VWVP+T ATET ++V+ +
Sbjct: 1111 LDGAGHEQGPSSFSELQNLADIGTIQKYSSVFRKFDRVWVPITSATETFGASVKIQQSNV 1170
Query: 1060 MPSGDSSGLPPTQSQDAVLGESNNNVNSNAFHTMHPQFIGYTRGKLHELVMKSYKNREFA 1119
P SSG T S+ ++ +S++FH++HPQFIG+TRGKLHELVMKSYKNREFA
Sbjct: 1171 EPVIGSSG---TLSKSQTASNVESDRSSSSFHSLHPQFIGFTRGKLHELVMKSYKNREFA 1227
Query: 1120 AAINEVLDPWINAKQPKKETE-HVYRKS--EGDTRAGKRARLLVRESDGDEETEEELQTI 1176
AAINE LDPWI AK+P KE + H+Y KS E D RAGKRAR+ ++D D E EE
Sbjct: 1228 AAINEALDPWIVAKRPPKEIDKHMYLKSGMEIDARAGKRARMQPAQNDEDYEMEEGTLH- 1286
Query: 1177 QDESTFEDLCGDASFPGEESASSAIESGGWGLLDGHTLAHVFHFLRSDMKSLAFASLTCR 1236
+DE+TFE LCGD +F EES S IE+G WGLLDGH LA VFHFLRSDMKSL FASLTC+
Sbjct: 1287 KDETTFEQLCGDTNFHREESMCSEIEAGSWGLLDGHMLARVFHFLRSDMKSLVFASLTCK 1346
Query: 1237 HWRAAVRFYKGISRQVDLSSVGPNCTDSLIRKTLNAFDKEKLNSILLVGCTNITSGMLEE 1296
WR AV FYKGIS QVDLSS PNCTD ++R +N ++KEK+N+++L GC NITSGMLEE
Sbjct: 1347 KWRCAVSFYKGISIQVDLSSGAPNCTDIMVRSIMNGYNKEKINAMVLAGCKNITSGMLEE 1406
Query: 1297 ILQSFPHLSSIDIRGCGQFGELALKFPNINWVKSQKSRGAKFNDSRSKIRSLKQITEKSS 1356
IL+SFP LSSIDIRGC QF ELAL+FPNI+W+KS+ + N SK+RSLKQI+E+
Sbjct: 1407 ILRSFPCLSSIDIRGCTQFMELALRFPNISWLKSRTRISVESN---SKLRSLKQISER-- 1461
Query: 1357 SAPKSKGLGDDMDDFGDLKDYFESVDKRDSANQSFRRSLYQRSKVFDARKSSSILSRDAR 1416
DDFG+LK+YF+SV+KRDSANQ FRRSLY+RSKVFDARKSSSIL RDAR
Sbjct: 1462 ------------DDFGELKEYFDSVNKRDSANQLFRRSLYKRSKVFDARKSSSILPRDAR 1509
Query: 1417 MRRWSIKKSENGYKRMEEFLASSLKEIMRVNTFEFFVPKVAEIEGRMKKGYYISHGLGSV 1476
MRRW++KKSEN Y+RME FLAS LK+IM+ NTF+FFVPK+ EIE RMK GYY+ HGL +V
Sbjct: 1510 MRRWAVKKSENSYRRMEGFLASGLKDIMKENTFDFFVPKLTEIEDRMKSGYYVGHGLRAV 1569
Query: 1477 KDDISRMCRDAIKAKNRGSAGDMNRITTLFIQLATRLEQGAKSSYYEREEMMKSWKDESP 1536
K+DISRMCRDAIK KNRG AGDMN I TLF+QLA+RLE+ +K SY ER+E+MKSWKD+
Sbjct: 1570 KEDISRMCRDAIKVKNRG-AGDMNHIITLFLQLASRLEESSKFSY-ERDELMKSWKDDVS 1627
Query: 1537 AGLYSATSKYKKKLSKMVSERKYMNRSNGTSLANGDFDYGEYASDREIRKRLSKLNRKSL 1596
L SA K+KKK KYMNRSNGT LANG FD+GEYASD+EI+KR+SKLNRKS+
Sbjct: 1628 TALDSAPIKHKKKAIDK----KYMNRSNGTILANGSFDFGEYASDQEIKKRISKLNRKSM 1683
Query: 1597 DSGSETSDDLDGSSEDGKSDSESTVSDTDSDMDFRSDGRARESRGAGDFTTDEGLDFSDD 1656
DSGSETSDD SSEDG+S ST SDT+SD+DFRS+GR +SRG F TDE D+
Sbjct: 1684 DSGSETSDDR--SSEDGRSGGGSTASDTESDLDFRSEGRPGDSRGDEYFMTDE-----DE 1736
Query: 1657 REWGARMTKASLVPPVTRKYEVIDQYVIVADEEDVRRKMRVSLPEDYAEKLNAQKNGSEE 1716
REWGARMT ASLVPPVTRKYEVIDQYVIVADEEDV+RKM VSLP+DYAEKL+AQKNG+EE
Sbjct: 1737 REWGARMTNASLVPPVTRKYEVIDQYVIVADEEDVQRKMSVSLPDDYAEKLDAQKNGTEE 1796
Query: 1717 LDMELPEVKDYKPRKQLGDQVFEQEVYGIDPYTHNLLLDSMPDELDWNLLEKHLFIEDVL 1776
LDMELPEVKDYKPRKQLGD+V EQEVYGIDPYTHNLLLDSMP+E+DW L +KH+FIEDVL
Sbjct: 1797 LDMELPEVKDYKPRKQLGDEVIEQEVYGIDPYTHNLLLDSMPEEVDWPLSQKHMFIEDVL 1856
Query: 1777 LRTLNKQVRHFTGTGNTPMMYPLQPVIEEIEKEAVDDCDVRTMKMCRGILKAMDSRPDDK 1836
L TLNKQVRH+TG GNTPM YPLQPV+EE+E+ A++DCD RTMK+CRGIL+A+DSRPDDK
Sbjct: 1857 LCTLNKQVRHYTGAGNTPMTYPLQPVVEELEQAAMEDCDTRTMKICRGILRAIDSRPDDK 1916
Query: 1837 YVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYN 1896
YVAYRKGLGVVCNKE GF +DDFVVEFLGEVYP WKWFEKQDGIR LQK++++PAPEFYN
Sbjct: 1917 YVAYRKGLGVVCNKEAGFRDDDFVVEFLGEVYPAWKWFEKQDGIRLLQKDSKEPAPEFYN 1976
Query: 1897 IYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIH 1956
IYLERPKGDADGYDLVVVDAMHKANYASRICHSC+PNCEAKVTAV G YQIGIY+VR I
Sbjct: 1977 IYLERPKGDADGYDLVVVDAMHKANYASRICHSCKPNCEAKVTAVGGQYQIGIYSVRKIQ 2036
Query: 1957 YGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFEKVLKELHGLLDRHQL 2016
+GEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAF+KVLKE HGLLDRH L
Sbjct: 2037 HGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKECHGLLDRHYL 2096
Query: 2017 MLEACELNSVSEEDYLELGRAGLGSCLLGGLPNWVVAYSARLVRFINLERTKLPEEILRH 2076
ML ACELNSVSEEDYL+LGRAGLGSCLLGGLP+WVVAYSARLVRFINLERTKLPEEILRH
Sbjct: 2097 MLGACELNSVSEEDYLDLGRAGLGSCLLGGLPDWVVAYSARLVRFINLERTKLPEEILRH 2156
Query: 2077 NLEEKRKYFSDICLEVEKSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCVFGDPKKAPPP 2136
NLEEK+KYF+DIC+EVE+SDAEVQAEGVYNQRLQNLAVTLDKVRYVMRC+FGDPK APPP
Sbjct: 2157 NLEEKKKYFADICIEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPKLAPPP 2216
Query: 2137 VERLSPEETVSFLWKGEGSLVEELIQCMAPHVEEDVLNDLKSKIQAHDPSGSEDIQRELR 2196
+E+L+PEETVSFLWK EGSLVEEL+QCM+PH++ ++LNDLKSKI AHDPS S+DI + ++
Sbjct: 2217 LEKLTPEETVSFLWKEEGSLVEELLQCMSPHMDGEMLNDLKSKIYAHDPSDSDDIPKAIQ 2276
Query: 2197 KSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKCFFRVQEYKAFTSPPVYISPLDLGP 2256
KSLLWLRDEVR+LPCTYKCRHDAAADLIH+YAYTK FFRV+EY AFTSPPVYISPLDLGP
Sbjct: 2277 KSLLWLRDEVRSLPCTYKCRHDAAADLIHVYAYTKSFFRVREYDAFTSPPVYISPLDLGP 2336
Query: 2257 KYADKLGADLQVYRKTYGENYCLGQLIFWHIQTNADPDCTLARASRGCLSLPDIGSFYAK 2316
K ADKLG Y+KTYGENYC+GQLIFWHIQTN +PD TLA+AS+GCLSLPDIGSFY+K
Sbjct: 2337 KCADKLGGLPHKYQKTYGENYCMGQLIFWHIQTNTEPDSTLAKASKGCLSLPDIGSFYSK 2396
Query: 2317 VQKPSRHRVYGPKTVRFMLSRMEKQPQRPWPKDRIWAFKSSPRIFGSPMLDSSLTGCPLD 2376
VQKPS+ R+YGPKTV+ ML RMEK PQ+PWPKD+IW+FKSSP++FGSPMLD+ L PLD
Sbjct: 2397 VQKPSQQRIYGPKTVKMMLGRMEKYPQKPWPKDQIWSFKSSPKVFGSPMLDAVLNKSPLD 2456
Query: 2377 REMVHWLKHRPAIFQAMWDR 2396
REMVHWLKHRP ++QAMWDR
Sbjct: 2457 REMVHWLKHRPTVYQAMWDR 2476
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255549293|ref|XP_002515700.1| huntingtin interacting protein, putative [Ricinus communis] gi|223545137|gb|EEF46647.1| huntingtin interacting protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|359485692|ref|XP_002275342.2| PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449453666|ref|XP_004144577.1| PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449493199|ref|XP_004159219.1| PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356515246|ref|XP_003526312.1| PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356544844|ref|XP_003540857.1| PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356547055|ref|XP_003541933.1| PREDICTED: probable histone-lysine N-methyltransferase ATXR3-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297739332|emb|CBI28983.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|186511821|ref|NP_193253.4| putative histone-lysine N-methyltransferase ATXR3 [Arabidopsis thaliana] gi|229488102|sp|O23372.2|ATXR3_ARATH RecName: Full=Probable histone-lysine N-methyltransferase ATXR3; AltName: Full=Protein SET DOMAIN GROUP 2; AltName: Full=Trithorax-related protein 3; Short=TRX-related protein 3 gi|332658165|gb|AEE83565.1| putative histone-lysine N-methyltransferase ATXR3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 2396 | ||||||
| TAIR|locus:2129755 | 2335 | SDG2 "SET domain protein 2" [A | 0.361 | 0.370 | 0.750 | 0.0 | |
| ZFIN|ZDB-GENE-030131-2140 | 2737 | setd2 "SET domain containing 2 | 0.030 | 0.027 | 0.402 | 2.7e-11 | |
| POMBASE|SPCC306.04c | 920 | set1 "histone lysine methyltra | 0.049 | 0.128 | 0.384 | 6.5e-11 | |
| UNIPROTKB|F1RG84 | 1546 | SETD1A "Uncharacterized protei | 0.031 | 0.049 | 0.419 | 3.3e-10 | |
| UNIPROTKB|F1LWJ1 | 1879 | F1LWJ1 "Uncharacterized protei | 0.031 | 0.040 | 0.444 | 5.8e-10 | |
| DICTYBASE|DDB_G0268132 | 898 | DDB_G0268132 "SET domain-conta | 0.031 | 0.083 | 0.430 | 1.2e-09 | |
| UNIPROTKB|F1M3Y2 | 1838 | F1M3Y2 "Uncharacterized protei | 0.031 | 0.041 | 0.444 | 8.7e-09 | |
| WB|WBGene00004782 | 1507 | set-2 [Caenorhabditis elegans | 0.031 | 0.050 | 0.469 | 9e-09 | |
| UNIPROTKB|H7C3H4 | 1675 | SETD2 "Histone-lysine N-methyl | 0.047 | 0.068 | 0.343 | 1e-08 | |
| UNIPROTKB|F1LPS5 | 853 | F1LPS5 "Uncharacterized protei | 0.031 | 0.089 | 0.419 | 1.4e-08 |
| TAIR|locus:2129755 SDG2 "SET domain protein 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3545 (1253.0 bits), Expect = 0., Sum P(4) = 0.
Identities = 656/874 (75%), Positives = 757/874 (86%)
Query: 1524 REEMMKSWKDESPAGLYSATSKYKKKLSKMVSERKYMNRSNGTSLANGDFDYGEYASDRE 1583
++E+MKSW+D S GL SAT KY KKLSK V+E+KYM+R++ T NG DYGEYASDRE
Sbjct: 1467 KDELMKSWQDGS--GLSSAT-KYNKKLSKTVAEKKYMSRTSDTFGVNGASDYGEYASDRE 1523
Query: 1584 IRKRLSKLNRKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRSDGRARESRGAG 1643
I++RLSKLNRK RS+GR+++ R
Sbjct: 1524 IKRRLSKLNRKSFSSESDTSSELSDNGKSDNYSSASASESESD---IRSEGRSQDLRIEK 1580
Query: 1644 DFTTDEGLD-FSDDREWGARMTKASLVPPVTRKYEVIDQYVIVADEEDVRRKMRVSLPED 1702
FT D+ D +++REWGARMTKASLVPPVTRKYEVI++Y IVADEE+V+RKMRVSLPED
Sbjct: 1581 YFTADDSFDSVTEEREWGARMTKASLVPPVTRKYEVIEKYAIVADEEEVQRKMRVSLPED 1640
Query: 1703 YAEKLNAQKNGSEELDMELPEVKDYKPRKQLGDQVFEQEVYGIDPYTHNLLLDSMPDELD 1762
Y EKLNAQ+NG EELDMELPEVK+YKPRK LGD+V EQEVYGIDPYTHNLLLDSMP ELD
Sbjct: 1641 YGEKLNAQRNGIEELDMELPEVKEYKPRKLLGDEVLEQEVYGIDPYTHNLLLDSMPGELD 1700
Query: 1763 WNLLEKHLFIEDVLLRTLNKQVRHFTGTGNTPMMYPLQPVIEEIEKEAVDDCDVRTMKMC 1822
W+L +KH FIEDV+LRTLN+QVR FTG+G+TPM++PL+PVIEE+++ A ++CD+RTMKMC
Sbjct: 1701 WSLQDKHSFIEDVVLRTLNRQVRLFTGSGSTPMVFPLRPVIEELKESAREECDIRTMKMC 1760
Query: 1823 RGILKAMDSRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRS 1882
+G+LK ++SR DDKYV+YRKGLGVVCNKEGGFGE+DFVVEFLGEVYPVWKWFEKQDGIRS
Sbjct: 1761 QGVLKEIESRSDDKYVSYRKGLGVVCNKEGGFGEEDFVVEFLGEVYPVWKWFEKQDGIRS 1820
Query: 1883 LQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVD 1942
LQ+N DPAPEFYNIYLERPKGDADGYDLVVVDAMH ANYASRICHSCRPNCEAKVTAVD
Sbjct: 1821 LQENKTDPAPEFYNIYLERPKGDADGYDLVVVDAMHMANYASRICHSCRPNCEAKVTAVD 1880
Query: 1943 GHYQIGIYTVRGIHYGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFEK 2002
GHYQIGIY+VR I YGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAF+K
Sbjct: 1881 GHYQIGIYSVRAIEYGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQK 1940
Query: 2003 VLKELHGLLDRHQLMLEACELNSVSEEDYLELGRAGLGSCLLGGLPNWVVAYSARLVRFI 2062
VLK+ HGLL+RH+LMLEAC LNSVSEEDYLELGRAGLGSCLLGGLP+W++AYSARLVRFI
Sbjct: 1941 VLKDWHGLLERHRLMLEACVLNSVSEEDYLELGRAGLGSCLLGGLPDWMIAYSARLVRFI 2000
Query: 2063 NLERTKLPEEILRHNLEEKRKYFSDICLEVEKSDAEVQAEGVYNQRLQNLAVTLDKVRYV 2122
N ERTKLPEEIL+HNLEEKRKYFSDI L+VEKSDAEVQAEGVYNQRLQNLAVTLDKVRYV
Sbjct: 2001 NFERTKLPEEILKHNLEEKRKYFSDIHLDVEKSDAEVQAEGVYNQRLQNLAVTLDKVRYV 2060
Query: 2123 MRCVFGDPKKAPPPVERLSPEETVSFLWKGEGSLVEELIQCMAPHVEEDVLNDLKSKIQA 2182
MR VFGDPK APPP+ERL+PEETVSF+W G+GSLV+EL+Q ++PH+EE LN+L+SKI
Sbjct: 2061 MRHVFGDPKNAPPPLERLTPEETVSFVWNGDGSLVDELLQSLSPHLEEGPLNELRSKIHG 2120
Query: 2183 HDPSGSEDIQRELRKSLLWLRDEVRNLPCTYKCRHDAAADLIHIYAYTKCFFRVQEYKAF 2242
HDPSGS D+ +EL++SLLWLRDE+R+LPCTYKCR+DAAADLIHIYAYTKCFF+V+EY++F
Sbjct: 2121 HDPSGSADVLKELQRSLLWLRDEIRDLPCTYKCRNDAAADLIHIYAYTKCFFKVREYQSF 2180
Query: 2243 TSPPVYISPLDLGPKYADKLGADLQVYRKTYGENYCLGQLIFWHIQTNADPDCTLARASR 2302
S PV+ISPLDLG KYADKLG ++ YRKTYGENYCLGQLI+W+ QTN DPD TL +A+R
Sbjct: 2181 ISSPVHISPLDLGAKYADKLGESIKEYRKTYGENYCLGQLIYWYNQTNTDPDLTLVKATR 2240
Query: 2303 GCLSLPDIGSFYAKVQKPSRHRVYGPKTVRFMLSRMEKQPQRPWPKDRIWAFKSSPRIFG 2362
GCLSLPD+ SFYAK QKPS+HRVYGPKTV+ M+S+M KQPQRPWPKD+IW FKS+PR+FG
Sbjct: 2241 GCLSLPDVASFYAKAQKPSKHRVYGPKTVKTMVSQMSKQPQRPWPKDKIWTFKSTPRVFG 2300
Query: 2363 SPMLDSSLTGCP-LDREMVHWLKHRPAIFQAMWD 2395
SPM D+ L LDRE++ WL++R +FQA WD
Sbjct: 2301 SPMFDAVLNNSSSLDRELLQWLRNRRHVFQATWD 2334
|
|
| ZFIN|ZDB-GENE-030131-2140 setd2 "SET domain containing 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPCC306.04c set1 "histone lysine methyltransferase Set1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RG84 SETD1A "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1LWJ1 F1LWJ1 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0268132 DDB_G0268132 "SET domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1M3Y2 F1M3Y2 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00004782 set-2 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|H7C3H4 SETD2 "Histone-lysine N-methyltransferase SETD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1LPS5 F1LPS5 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O23372 | ATXR3_ARATH | 2, ., 1, ., 1, ., 4, 3 | 0.5686 | 0.9257 | 0.9498 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.1.1.43 | 0.737 |
| 3rd Layer | 2.1.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 2396 | |||
| smart00317 | 124 | smart00317, SET, SET (Su(var)3-9, Enhancer-of-zest | 1e-22 | |
| pfam00856 | 113 | pfam00856, SET, SET domain | 2e-18 | |
| COG2940 | 480 | COG2940, COG2940, Proteins containing SET domain [ | 9e-07 | |
| TIGR01642 | 509 | TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, la | 9e-04 | |
| COG3883 | 265 | COG3883, COG3883, Uncharacterized protein conserve | 0.001 | |
| TIGR01642 | 509 | TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, la | 0.002 |
| >gnl|CDD|214614 smart00317, SET, SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-22
Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 1837 YVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYN 1896
+ + KG GV ++ GE F+ E++GE+ + E+ P+ Y+
Sbjct: 6 FKSPGKGWGVRATEDIPKGE--FIGEYVGEIITSEEAEER---------------PKAYD 48
Query: 1897 IYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIH 1956
+ D + +DA K N A I HSC PNCE V+G +I I+ +R I
Sbjct: 49 TDGAKAFYLFDIDSDLCIDARRKGNLARFINHSCEPNCELLFVEVNGDDRIVIFALRDIK 108
Query: 1957 YGEEITFDYNSV 1968
GEE+T DY S
Sbjct: 109 PGEELTIDYGSD 120
|
Putative methyl transferase, based on outlier plant homologues. Length = 124 |
| >gnl|CDD|216155 pfam00856, SET, SET domain | Back alignment and domain information |
|---|
| >gnl|CDD|225491 COG2940, COG2940, Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|233503 TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, large subunit, splicing factor | Back alignment and domain information |
|---|
| >gnl|CDD|226400 COG3883, COG3883, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|233503 TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, large subunit, splicing factor | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2396 | |||
| KOG1080 | 1005 | consensus Histone H3 (Lys4) methyltransferase comp | 100.0 | |
| KOG4442 | 729 | consensus Clathrin coat binding protein/Huntingtin | 100.0 | |
| KOG1082 | 364 | consensus Histone H3 (Lys9) methyltransferase SUV3 | 99.95 | |
| KOG1079 | 739 | consensus Transcriptional repressor EZH1 [Transcri | 99.83 | |
| KOG1083 | 1306 | consensus Putative transcription factor ASH1/LIN-5 | 99.83 | |
| smart00317 | 116 | SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) | 99.82 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 99.76 | |
| KOG1085 | 392 | consensus Predicted methyltransferase (contains a | 99.6 | |
| COG2940 | 480 | Proteins containing SET domain [General function p | 99.48 | |
| PF00856 | 162 | SET: SET domain; InterPro: IPR001214 The SET domai | 99.31 | |
| KOG1081 | 463 | consensus Transcription factor NSD1 and related SE | 98.79 | |
| KOG2589 | 453 | consensus Histone tail methylase [Chromatin struct | 98.67 | |
| PF14237 | 45 | DUF4339: Domain of unknown function (DUF4339) | 97.43 | |
| KOG1141 | 1262 | consensus Predicted histone methyl transferase [Ch | 96.96 | |
| KOG2461 | 396 | consensus Transcription factor BLIMP-1/PRDI-BF1, c | 96.46 | |
| PF12937 | 47 | F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B | 96.15 | |
| PF02213 | 57 | GYF: GYF domain; InterPro: IPR003169 The glycine-t | 95.62 | |
| cd00072 | 57 | GYF GYF domain: contains conserved Gly-Tyr-Phe res | 95.41 | |
| KOG4676 | 479 | consensus Splicing factor, arginine/serine-rich [R | 95.39 | |
| KOG0147 | 549 | consensus Transcriptional coactivator CAPER (RRM s | 93.62 | |
| KOG4368 | 757 | consensus Predicted RNA binding protein, contains | 92.76 | |
| PF14237 | 45 | DUF4339: Domain of unknown function (DUF4339) | 92.53 | |
| KOG4368 | 757 | consensus Predicted RNA binding protein, contains | 91.92 | |
| cd00072 | 57 | GYF GYF domain: contains conserved Gly-Tyr-Phe res | 91.9 | |
| smart00256 | 41 | FBOX A Receptor for Ubiquitination Targets. | 91.0 | |
| smart00508 | 26 | PostSET Cysteine-rich motif following a subset of | 90.75 | |
| KOG0147 | 549 | consensus Transcriptional coactivator CAPER (RRM s | 90.34 | |
| KOG2146 | 354 | consensus Splicing coactivator SRm160/300, subunit | 89.93 | |
| PF02213 | 57 | GYF: GYF domain; InterPro: IPR003169 The glycine-t | 89.4 | |
| KOG1847 | 878 | consensus mRNA splicing factor [RNA processing and | 89.38 | |
| KOG4341 | 483 | consensus F-box protein containing LRR [General fu | 89.2 | |
| KOG2548 | 653 | consensus SWAP mRNA splicing regulator [RNA proces | 88.96 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 88.63 | |
| PF00646 | 48 | F-box: F-box domain; InterPro: IPR001810 The F-box | 88.59 | |
| PF05033 | 103 | Pre-SET: Pre-SET motif; InterPro: IPR007728 This r | 88.51 | |
| smart00444 | 56 | GYF Contains conserved Gly-Tyr-Phe residues. Proli | 88.21 | |
| cd05512 | 98 | Bromo_brd1_like Bromodomain; brd1_like subfamily. | 86.11 | |
| KOG2997 | 366 | consensus F-box protein FBX9 [General function pre | 86.04 | |
| KOG3794 | 453 | consensus CBF1-interacting corepressor CIR and rel | 85.7 | |
| cd05529 | 128 | Bromo_WDR9_I_like Bromodomain; WDR9 repeat I_like | 85.18 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 85.17 | |
| PF00439 | 84 | Bromodomain: Bromodomain; InterPro: IPR001487 Brom | 84.36 | |
| cd05513 | 98 | Bromo_brd7_like Bromodomain, brd7_like subgroup. T | 84.23 | |
| TIGR01642 | 509 | U2AF_lg U2 snRNP auxilliary factor, large subunit, | 84.04 | |
| TIGR01622 | 457 | SF-CC1 splicing factor, CC1-like family. A homolog | 83.7 | |
| KOG4246 | 1194 | consensus Predicted DNA-binding protein, contains | 83.26 | |
| KOG3794 | 453 | consensus CBF1-interacting corepressor CIR and rel | 82.22 | |
| KOG0415 | 479 | consensus Predicted peptidyl prolyl cis-trans isom | 81.34 | |
| cd05507 | 104 | Bromo_brd8_like Bromodomain, brd8_like subgroup. I | 80.07 |
| >KOG1080 consensus Histone H3 (Lys4) methyltransferase complex, subunit SET1 and related methyltransferases [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-68 Score=677.22 Aligned_cols=935 Identities=26% Similarity=0.263 Sum_probs=692.1
Q ss_pred CCchhhhhhccccccCCCCccccccccCCCCc-ccccccccccchhHHHHhhhcccccccCCchhhccccccCC------
Q 000079 717 SGNLLADTGDTAQSTGEEFPVTLQSQCCPDGS-AAAAESSEDLHIDVRVGALLDGFTVIPGKEIETLGELKSGD------ 789 (2396)
Q Consensus 717 ~gn~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e~~e~~~id~rv~~l~~~~~~~~g~e~e~~~~~~~~~------ 789 (2396)
|+|++-+...+.++-. ++......+|.+-. .++....+++.++.|+..+..+....++.|+++.++.+...
T Consensus 47 ~~n~~~~~~~~~vp~~--t~~~~~~sv~~~t~~~~s~~~~~~~~s~~~~~~~~~~~~~~~~ke~~~~~~~~~~~~~~~k~ 124 (1005)
T KOG1080|consen 47 PCNSVPELLTSSVPSL--TSKEESQSVCSDTSKKSSRGRVRAVPSRFRDSNVGTWRSSTPSKEFETEGEILKVNSEFEEV 124 (1005)
T ss_pred cccccccccccCCCCC--CCCCcceeeeecCCCccccCCcccccccccccccccCCcccccccccCcceeeecccccCCc
Confidence 4555555554433300 01111233455555 88889999999999999999999999999998888877210
Q ss_pred ------ccCccc-----ccCCCCcccccccccCCCcccCChhhhccccccceeecCCcccccCCCCCCCCCCCCCCCCcc
Q 000079 790 ------KDHWVV-----CFDSDEWFSGRWSCKGGDWKRNDEAAQDRCSRKKQVLNDGFPLCQMPKSGYEDPRWNQKDDLY 858 (2396)
Q Consensus 790 ------~~~~~~-----~~~~~~w~~~~ws~kggdw~r~~~~~qd~~~~~k~vln~g~~lc~~~k~~~edpr~~~~d~ly 858 (2396)
.+++-. +.-...--+--|+| .+-++.+|+|+. .+|+|+|+|||.+++..++.+.|+.+.+++
T Consensus 125 ~~s~~~~~~~~~~~s~~~~~~~~~~ss~~~~-----~~~~~~s~~~~~--~i~~~~~~p~~~~~~~~~~~~~~~~~~e~~ 197 (1005)
T KOG1080|consen 125 KVSSGSSKLHPSKDSKVFPRKDNPDSSEVSC-----IDYWEASQDRYD--EIVANDGMPLKSDASSKGVYKPEEFTVGDL 197 (1005)
T ss_pred eeccCccccCcccccccCCcCCCCcccccch-----hhhhhcccCccc--ceeeccCCcCcccccccccccCcccccchh
Confidence 011110 00000111112889 888889999999 999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcccccCCccCCCCCCCCcccccccccccccceeeeEEeeeeeEecCCCCccccCccccccCcCCCCCc
Q 000079 859 YPSHSRRLDLPPWAYACPDERNDGSGGSRSTQSKLAAVRGVKGTMLPVVRINACVVNDHGSFVSEPRSKVRAKERHSSRS 938 (2396)
Q Consensus 859 ~~~~~~~~~lp~wa~~~~~e~~~~~~~~~~~~~~~~~~~~v~g~~l~vvr~n~~vv~d~~~~~~~~~~k~~~~~r~~~r~ 938 (2396)
++..+.+...+.||+...++++ +++||+-+-+|+|.-+..|.+.+...-.....+.++..+++++.
T Consensus 198 ~~~~~~~~~~~~~a~~~d~~~~--------------~~~~v~as~~~~~~~~~~~~~s~~~~~~~~~~~r~~m~~~~~~~ 263 (1005)
T KOG1080|consen 198 VWAKSGRNEPPWPAIVIDPIRQ--------------APRGVLASCLPVAACVMFFGNSGVPTERDYAWVRRGMERPFSRP 263 (1005)
T ss_pred hhcccccCCcccccceeehhhc--------------chhhhhccCcchhhhheeeeccCCccccchhhhhhccccccchh
Confidence 9999999999999998755542 66899999888888888888888776777889999999999999
Q ss_pred cCcccccccccccccccccccccccCCCCCCcccccccccCCCCcccccccccccccceEEecCCCCccCCCcHHHHHHH
Q 000079 939 ARSYSSANDVRRSSAESDSHSKARNNQDSQGSWKSIACINTPKDRLCTVDDLQLQLGEWYYLDGAGHERGPSSFSELQVL 1018 (2396)
Q Consensus 939 ~r~~~~~~~~~~~~~e~~s~sk~~~~~~~~~~~~~~~~~~~p~d~~ct~~~l~l~~g~w~yldg~g~e~gp~s~selq~~ 1018 (2396)
.+.+.-..+..+-.....+|+-+..-+..|++|+-. +++++|+.|+|.+-|+++.+.||++|++++.+
T Consensus 264 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~e~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 331 (1005)
T KOG1080|consen 264 VRPFQDQTELKREKARSFEQALEEAGLAEQGNWKKD------------VDDAHLITGDSSATDSALSEGGPSSFSELQKL 331 (1005)
T ss_pred hhhccccccccccCccchhHHHHHhhcccccccccc------------ccchhhhcCCCccchhhhhccccccccccccc
Confidence 999999999888888888888888888999999977 89999999999999999999999999999999
Q ss_pred HhhcccccccccccccCceeeecccccccccccccccCCcccCCCCCCCCCCCCcccccccccCCCCCCCccccccccee
Q 000079 1019 VDQGCIQKHTSVFRKFDKVWVPLTFATETSASTVRNHGEKIMPSGDSSGLPPTQSQDAVLGESNNNVNSNAFHTMHPQFI 1098 (2396)
Q Consensus 1019 v~~g~i~~~ssvfrk~d~~wvp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~~~hpqf~ 1098 (2396)
+..|.+..+++||++.|+.|+|++.+.....-..+.......+.+. .++....++.-...... .+-..|+..|+++.
T Consensus 332 ~~~~~~~s~~~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~l~~k~~~~~~~s~~~--~g~~~~~~~~~~~~ 408 (1005)
T KOG1080|consen 332 HEKGFIKSHSSVFRKSDKIHVPSTSITKSPPPIAKSAKKTKALPPA-QGLLCKECSDETKSNQT--CGICKRIWHSSDSG 408 (1005)
T ss_pred cccCCccccccccCCCccccccccccccCCCCchhhccccCccccc-chhhhhhhhchhhcccc--ccccceeccccccc
Confidence 9999999999999999999999999988765555444444444443 33333333333322222 44557889999999
Q ss_pred eecchhhHHHHHHHhcchHHHHHHHhhhccccccCCCchhhh-hhhccCCCCcccccceeeccccCCCCcchhhhhh-hc
Q 000079 1099 GYTRGKLHELVMKSYKNREFAAAINEVLDPWINAKQPKKETE-HVYRKSEGDTRAGKRARLLVRESDGDEETEEELQ-TI 1176 (2396)
Q Consensus 1099 gyt~gklhe~vmk~~k~r~~~~~~ne~ld~wi~~~~p~~e~e-~~~~~s~~d~~~~kr~r~~~~~s~~~~~~~~~~~-~~ 1176 (2396)
+| +++.+-|+||.+.+++.+-+ ..+..+.... ...+. .-.+.-...+ -+
T Consensus 409 d~--------------------~~~~~c~~~~~~~~~~~~~~~~~~~s~~~~~------~~~~~---~~~~~~~~~~~~~ 459 (1005)
T KOG1080|consen 409 DW--------------------VRCDGCDVWIHARCDKISSEKFKYSSSGMHN------YQTLN---FPQEYTALNLSYC 459 (1005)
T ss_pred ce--------------------eeecccccceeeccCcccccccccccccccc------ccccc---chhhhhhhhcccc
Confidence 99 78999999999999887776 3332221100 00000 0000001111 11
Q ss_pred -cCcchHhhhcCCCcccCCCccccccccCccccCcchHHHHHHHHhhhchhHHHHhhhhchhHHHHHHhhcccceeeecC
Q 000079 1177 -QDESTFEDLCGDASFPGEESASSAIESGGWGLLDGHTLAHVFHFLRSDMKSLAFASLTCRHWRAAVRFYKGISRQVDLS 1255 (2396)
Q Consensus 1177 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~w~~l~g~~larvfh~lr~d~ksl~~~~~tc~~w~~~~~~~~~~~~~vdls 1255 (2396)
+...+|+.++++.+ +++|++|||.++.++|...+.+++|+||.++.+-++..+++.|..
T Consensus 460 ~~~~l~~d~~s~~~~--------------------~~~~~~~~~~~~~~~~~k~~~~e~~k~~~~~~~~~k~~~~~~~~~ 519 (1005)
T KOG1080|consen 460 PKCKLTFDDLSTDLS--------------------PAALARVFHMLRYSVKKKKFLSEWERHTGATAKIWKDSSRVKDEL 519 (1005)
T ss_pred chhheecccccccCC--------------------cchheeeecccCcchhhhhcccchhhhhccccccccccccccccc
Confidence 45555555555544 899999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHhhccccccceEEecccccCChhHHHHHHHhCCCccEEeeccccccccccccCCcccccccccccC
Q 000079 1256 SVGPNCTDSLIRKTLNAFDKEKLNSILLVGCTNITSGMLEEILQSFPHLSSIDIRGCGQFGELALKFPNINWVKSQKSRG 1335 (2396)
Q Consensus 1256 ~~g~~ctd~~~~~~~~~y~~~~~~~~~l~~c~n~~~~~l~~~l~~~p~~~~~~i~gc~q~~~l~~~f~~v~w~~~~~~~~ 1335 (2396)
..++.|++.....+|++|...+..+|++.+|+++...+|..+....|.+.-.++.+|.++.++.+...||.|+.++-.+.
T Consensus 520 ~~l~~~~~~~~~~~~~~~~~~~p~s~~~~~~~s~~~~~~~~~~~~~~~l~~~~t~~c~~~~~~~~~~~n~~~~~~~~~~~ 599 (1005)
T KOG1080|consen 520 LPLPKWVESRGRSIMNTYNSEKPKSIVLMGKTSVQRMLLELIEKREPRLSKWTTERCAVCRDDEDWEKNVSIICDRCTRS 599 (1005)
T ss_pred ccchhhhhhccccccccccccCCcchhhhccchhhhhcCcccccchhhhcCCCcccccccccccccccceeeeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998874411
Q ss_pred cccCcccccccchhhhcccCCCCcCcCCCCCCCCCcccchhhhhccccccchhhhhhhhhhccchhhhccccccccchhH
Q 000079 1336 AKFNDSRSKIRSLKQITEKSSSAPKSKGLGDDMDDFGDLKDYFESVDKRDSANQSFRRSLYQRSKVFDARKSSSILSRDA 1415 (2396)
Q Consensus 1336 ~~~~~~~~k~~sl~~~~~~~~~~~~~~~~~~~~~~~~~l~~yf~~v~~r~~a~~~f~~~~y~rs~~~dar~ss~~~~~da 1415 (2396)
-..+.+|+++.|+..++..++++++ .|+|.+++.+.++.++.++|
T Consensus 600 ------------------------------~~s~~~g~~~~~~~~~~~~~~~~~~----~~~r~~~l~~~~g~al~p~d- 644 (1005)
T KOG1080|consen 600 ------------------------------VHSECYGNLKSYDGTSWVCDSCETL----DIKRSCCLCPVKGGALKPTD- 644 (1005)
T ss_pred ------------------------------CCCcccccCCCCCCCcchhhccccc----cCCchhhhccccCcccCCCC-
Confidence 1147889999999999999998888 99999999999999999999
Q ss_pred HHHHhhhhhcchhhHHHHHHHHHHHHHHHHhcccccccchhHHHHhhhccccccccCCcchhhHHHH--HHHHHHHhccC
Q 000079 1416 RMRRWSIKKSENGYKRMEEFLASSLKEIMRVNTFEFFVPKVAEIEGRMKKGYYISHGLGSVKDDISR--MCRDAIKAKNR 1493 (2396)
Q Consensus 1416 ~~rr~~~k~~e~~y~~~~~~~~~~l~~im~~~~~~~f~~kv~~ie~~~k~gyy~~~g~~~~k~di~~--~~r~a~~~~~~ 1493 (2396)
+.|.|.+..|. .+||+++++-.+-.|..+.+.|+--.+.+|=.- ||+-.--..+.. .|+.|+.
T Consensus 645 ~gr~~~~e~a~---~~~e~~~~~~~~~~p~~~~~~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~a~~---- 709 (1005)
T KOG1080|consen 645 EGRWVHVECAW---FRPEVCLASPERMEPAVGTFKIPALSFLKICFI--------HGSCRQCCKCETGSHAMCASR---- 709 (1005)
T ss_pred ccchhhhhchh---ccccccCCCccCCCCcccccccCccchhhhccc--------cccccccchhhhcceehhhcC----
Confidence 99999999999 899999999999999999999998877664222 554432222211 1233333
Q ss_pred CCCCccchHHHHHHHHHHHhhhccccchhhHHHHHhhcccCCCCcccccchhhhhhhhhhhhhhhhcccCCCCcccCCCC
Q 000079 1494 GSAGDMNRITTLFIQLATRLEQGAKSSYYEREEMMKSWKDESPAGLYSATSKYKKKLSKMVSERKYMNRSNGTSLANGDF 1573 (2396)
Q Consensus 1494 ~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~r~~~~~~~~~~~~~~~~~~~~k~k~k~~k~~~~~~~~~~~~~~~~~~~~~ 1573 (2396)
.++ ++.+.+|+.- ++.+-...+.-..+++ .-++.-+...+-.+.+..+++..++..+++-+
T Consensus 710 ----------~~~-~~~~~~l~~~---~~~~~~~~~~~~~~~d-----~~l~~~~~~~~~~~~~~~~~k~~~~~g~~~~~ 770 (1005)
T KOG1080|consen 710 ----------AGY-IMEAVSLEEV---SQQTTSYVKEDGPGPD-----SVLKVNTPSGKFGAENLSQNKKSRTDGVRLVL 770 (1005)
T ss_pred ----------ccC-hhhhhhhhhh---hhhhhhhhhhccCCcc-----cceeecCccccccccchhhhhhcccccccccc
Confidence 333 4444444442 1111111111000111 11111111222223344455555555569999
Q ss_pred CcccccchHHHHHHhhhhcccccCCCCCCCcCCCCCCCCCCCCCccccccCCccccccccccccccCCCCCccCCCCccc
Q 000079 1574 DYGEYASDREIRKRLSKLNRKSLDSGSETSDDLDGSSEDGKSDSESTVSDTDSDMDFRSDGRARESRGAGDFTTDEGLDF 1653 (2396)
Q Consensus 1574 d~~~~~~~~ei~r~l~kl~~~~~~s~setsd~~d~~~e~~~~~~~~t~s~~~s~~~~~~~~~~~~~~~~~~~~~~dgl~~ 1653 (2396)
++++++.++||++++..+|+.++.|+.-.. .+ ..++++....+++|+.|..+.....+.+...+++..+
T Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~------~~-~r~~~~~~~~~~~s~~~~~s~~~s~~~s~~~rl~q~r---- 839 (1005)
T KOG1080|consen 771 TYKEYAPLREIKSRAEPLNRIDFSSEARCR------SE-SRSDNSKSPLAEESESDITSGGSSHDLSAEERLNQFR---- 839 (1005)
T ss_pred ccccccccccchhcccCCcccCcccccccc------ch-hhcccccccccccccccccccccccchhHHhhhHHHH----
Confidence 999999999999999999999998874332 22 2788888888888888888777766655444443222
Q ss_pred ccccccccccccccCCCCccceeeeEEeeeeccchHhHhhhcccccchhhhhhhccccCCCccccCCcCccccccccccc
Q 000079 1654 SDDREWGARMTKASLVPPVTRKYEVIDQYVIVADEEDVRRKMRVSLPEDYAEKLNAQKNGSEELDMELPEVKDYKPRKQL 1733 (2396)
Q Consensus 1654 i~~~~~G~~m~k~~lvP~~~rky~vI~~y~iv~D~e~v~~km~v~lpd~~~Ekl~~~~ngt~e~~~~~PelK~Y~prKvL 1733 (2396)
| .=.++..+. .|+.++.+.|++.++.++
T Consensus 840 ---------l-----~a~~~~~~~--------~~~~~~~~~~~~~~rkk~------------------------------ 867 (1005)
T KOG1080|consen 840 ---------L-----SASFTASFI--------LDEAEVLRYNQLKFRKKY------------------------------ 867 (1005)
T ss_pred ---------h-----hhhcccccc--------cchHHHHHHHHHhhhhhh------------------------------
Confidence 0 000000000 333344433333322220
Q ss_pred CCccceeeecccCccCcccccccCCCccccchhhhchhhHHHHHHHHhhhccccCCCCCCCCCCCCCCcccccCCcCccC
Q 000079 1734 GDQVFEQEVYGIDPYTHNLLLDSMPDELDWNLLEKHLFIEDVLLRTLNKQVRHFTGTGNTPMMYPLQPVIEEIEKEAVDD 1813 (2396)
Q Consensus 1734 G~DViEqel~GcDcyTr~~I~~sLP~el~Ws~~qKn~FIek~LL~tLNkqvRhf~G~g~tP~~c~ckPViEC~eC~Cge~ 1813 (2396)
T Consensus 868 -------------------------------------------------------------------------------- 867 (1005)
T KOG1080|consen 868 -------------------------------------------------------------------------------- 867 (1005)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCchhhhcccccccccccCCCcceecCCccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCc
Q 000079 1814 CDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPE 1893 (2396)
Q Consensus 1814 C~NRllQ~Cq~ilk~i~r~PleVFrT~~KGwGVFAteDegI~KGEFI~EYVGEVIt~eE~~ERqd~IRrlq~d~kd~~~d 1893 (2396)
+..-+...+||||||++ +|.+|+||+||+||+|.+.=...++. .|...+...
T Consensus 868 --------------------~~F~~s~iH~wglfa~~--~i~~~dmViEY~Ge~vR~~iad~RE~------~Y~~~gi~~ 919 (1005)
T KOG1080|consen 868 --------------------VKFGRSGIHGWGLFAME--NIAAGDMVIEYRGELVRSSIADLREA------RYERMGIGD 919 (1005)
T ss_pred --------------------hccccccccccceeecc--CccccceEEEeeceehhhhHHHHHHH------HHhccCccc
Confidence 00011335799999997 59999999999999997532222221 122233344
Q ss_pred ceEEeecCCCCCCCCCceEEEcCcccCCcccccCCCCCCCeEEEEEEECCEEEEEEEEcCCCCCCCeEEEecCCCCCCcc
Q 000079 1894 FYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEITFDYNSVTESKE 1973 (2396)
Q Consensus 1894 FY~myL~r~~gD~dGyd~lvIDATrkGNiARFINHSCdPNCeaq~v~VnGe~RIgfFAlRDI~pGEELTFDYg~~~eske 1973 (2396)
.|||+.+. .+|||||++||+||||||||+|||++.++.|+|+.+|+|||.|+|.+||||||||.|..+..
T Consensus 920 ---sYlfrid~------~~ViDAtk~gniAr~InHsC~PNCyakvi~V~g~~~IvIyakr~I~~~EElTYDYkF~~e~~- 989 (1005)
T KOG1080|consen 920 ---SYLFRIDD------EVVVDATKKGNIARFINHSCNPNCYAKVITVEGDKRIVIYSKRDIAAGEELTYDYKFPTEDD- 989 (1005)
T ss_pred ---ceeeeccc------ceEEeccccCchhheeecccCCCceeeEEEecCeeEEEEEEecccccCceeeeecccccccc-
Confidence 44555543 28999999999999999999999999999999999999999999999999999999988643
Q ss_pred cccCeeEEeCCCCccccc
Q 000079 1974 EYEASVCLCGSQVCRGSY 1991 (2396)
Q Consensus 1974 E~ek~~CLCGS~nCRGs~ 1991 (2396)
+.+|+|||++|||++
T Consensus 990 ---kipClCgap~Crg~~ 1004 (1005)
T KOG1080|consen 990 ---KIPCLCGAPNCRGFL 1004 (1005)
T ss_pred ---ccccccCCCcccccc
Confidence 699999999999954
|
|
| >KOG4442 consensus Clathrin coat binding protein/Huntingtin interacting protein HIP1, involved in regulation of endocytosis [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1082 consensus Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >KOG1079 consensus Transcriptional repressor EZH1 [Transcription] | Back alignment and domain information |
|---|
| >KOG1083 consensus Putative transcription factor ASH1/LIN-59 [Transcription] | Back alignment and domain information |
|---|
| >smart00317 SET SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG1085 consensus Predicted methyltransferase (contains a SET domain) [General function prediction only] | Back alignment and domain information |
|---|
| >COG2940 Proteins containing SET domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF00856 SET: SET domain; InterPro: IPR001214 The SET domain appears generally as one part of a larger multidomain protein, and recently there were described three structures of very different proteins with distinct domain compositions: Neurospora crassa DIM-5, a member of the Su(var) family of HKMTs which methylate histone H3 on lysine 9,human SET7 (also called SET9), which methylates H3 on lysine 4 and garden pea Rubisco LSMT, an enzyme that does not modify histones, but instead methylates lysine 14 in the flexible tail of the large subunit of the enzyme Rubisco | Back alignment and domain information |
|---|
| >KOG1081 consensus Transcription factor NSD1 and related SET domain proteins [Transcription] | Back alignment and domain information |
|---|
| >KOG2589 consensus Histone tail methylase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >PF14237 DUF4339: Domain of unknown function (DUF4339) | Back alignment and domain information |
|---|
| >KOG1141 consensus Predicted histone methyl transferase [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG2461 consensus Transcription factor BLIMP-1/PRDI-BF1, contains C2H2-type Zn-finger and SET domains [Transcription] | Back alignment and domain information |
|---|
| >PF12937 F-box-like: F-box-like; PDB: 1P22_A 2OVP_B 2OVR_B 2OVQ_B 1FS1_A 1FS2_C 1FQV_I 1LDK_E 2AST_B 2ASS_B | Back alignment and domain information |
|---|
| >PF02213 GYF: GYF domain; InterPro: IPR003169 The glycine-tyrosine-phenylalanine (GYF) domain is an around 60-amino acid domain which contains a conserved GP[YF]xxxx[MV]xxWxxx[GN]YF motif | Back alignment and domain information |
|---|
| >cd00072 GYF GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins | Back alignment and domain information |
|---|
| >KOG4676 consensus Splicing factor, arginine/serine-rich [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0147 consensus Transcriptional coactivator CAPER (RRM superfamily) [Transcription] | Back alignment and domain information |
|---|
| >KOG4368 consensus Predicted RNA binding protein, contains SWAP, RPR and G-patch domains [General function prediction only] | Back alignment and domain information |
|---|
| >PF14237 DUF4339: Domain of unknown function (DUF4339) | Back alignment and domain information |
|---|
| >KOG4368 consensus Predicted RNA binding protein, contains SWAP, RPR and G-patch domains [General function prediction only] | Back alignment and domain information |
|---|
| >cd00072 GYF GYF domain: contains conserved Gly-Tyr-Phe residues; Proline-binding domain in CD2-binding and other proteins | Back alignment and domain information |
|---|
| >smart00256 FBOX A Receptor for Ubiquitination Targets | Back alignment and domain information |
|---|
| >smart00508 PostSET Cysteine-rich motif following a subset of SET domains | Back alignment and domain information |
|---|
| >KOG0147 consensus Transcriptional coactivator CAPER (RRM superfamily) [Transcription] | Back alignment and domain information |
|---|
| >KOG2146 consensus Splicing coactivator SRm160/300, subunit SRm160 (contains PWI domain) [RNA processing and modification; General function prediction only] | Back alignment and domain information |
|---|
| >PF02213 GYF: GYF domain; InterPro: IPR003169 The glycine-tyrosine-phenylalanine (GYF) domain is an around 60-amino acid domain which contains a conserved GP[YF]xxxx[MV]xxWxxx[GN]YF motif | Back alignment and domain information |
|---|
| >KOG1847 consensus mRNA splicing factor [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG4341 consensus F-box protein containing LRR [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2548 consensus SWAP mRNA splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF00646 F-box: F-box domain; InterPro: IPR001810 The F-box domain was first described as a sequence motif found in cyclin-F that interacts with the protein SKP1 [, ] | Back alignment and domain information |
|---|
| >PF05033 Pre-SET: Pre-SET motif; InterPro: IPR007728 This region is found in a number of histone lysine methyltransferases (HMTase), N-terminal to the SET domain; it is generally described as the pre-SET domain | Back alignment and domain information |
|---|
| >smart00444 GYF Contains conserved Gly-Tyr-Phe residues | Back alignment and domain information |
|---|
| >cd05512 Bromo_brd1_like Bromodomain; brd1_like subfamily | Back alignment and domain information |
|---|
| >KOG2997 consensus F-box protein FBX9 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3794 consensus CBF1-interacting corepressor CIR and related proteins [Transcription] | Back alignment and domain information |
|---|
| >cd05529 Bromo_WDR9_I_like Bromodomain; WDR9 repeat I_like subfamily | Back alignment and domain information |
|---|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF00439 Bromodomain: Bromodomain; InterPro: IPR001487 Bromodomains are found in a variety of mammalian, invertebrate and yeast DNA-binding proteins [] | Back alignment and domain information |
|---|
| >cd05513 Bromo_brd7_like Bromodomain, brd7_like subgroup | Back alignment and domain information |
|---|
| >TIGR01642 U2AF_lg U2 snRNP auxilliary factor, large subunit, splicing factor | Back alignment and domain information |
|---|
| >TIGR01622 SF-CC1 splicing factor, CC1-like family | Back alignment and domain information |
|---|
| >KOG4246 consensus Predicted DNA-binding protein, contains SAP domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3794 consensus CBF1-interacting corepressor CIR and related proteins [Transcription] | Back alignment and domain information |
|---|
| >KOG0415 consensus Predicted peptidyl prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd05507 Bromo_brd8_like Bromodomain, brd8_like subgroup | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 2396 | ||||
| 3ope_A | 222 | Structural Basis Of Auto-Inhibitory Mechanism Of Hi | 5e-11 | ||
| 2w5y_A | 192 | Binary Complex Of The Mixed Lineage Leukaemia (Mll1 | 2e-10 | ||
| 4fmu_A | 278 | Crystal Structure Of Methyltransferase Domain Of Hu | 3e-10 | ||
| 3ooi_A | 232 | Crystal Structure Of Human Histone-Lysine N-Methylt | 4e-09 | ||
| 2r3a_A | 300 | Methyltransferase Domain Of Human Suppressor Of Var | 8e-05 | ||
| 3f9z_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 8e-05 | ||
| 3f9w_A | 166 | Structural Insights Into Lysine Multiple Methylatio | 8e-05 | ||
| 4ij8_A | 165 | Crystal Structure Of The Complex Of Setd8 With Sam | 8e-05 | ||
| 1zkk_A | 167 | Crystal Structure Of Hset8 In Ternary Complex With | 2e-04 | ||
| 2bqz_A | 161 | Crystal Structure Of A Ternary Complex Of The Human | 2e-04 |
| >pdb|3OPE|A Chain A, Structural Basis Of Auto-Inhibitory Mechanism Of Histone Methyltransferase Length = 222 | Back alignment and structure |
|
| >pdb|2W5Y|A Chain A, Binary Complex Of The Mixed Lineage Leukaemia (Mll1) Set Domain With The Cofactor Product S-Adenosylhomocysteine. Length = 192 | Back alignment and structure |
| >pdb|4FMU|A Chain A, Crystal Structure Of Methyltransferase Domain Of Human Set Domain- Containing Protein 2 Compound: Pr-Snf Length = 278 | Back alignment and structure |
| >pdb|3OOI|A Chain A, Crystal Structure Of Human Histone-Lysine N-Methyltransferase Nsd1 Set Domain In Complex With S-Adenosyl-L-Methionine Length = 232 | Back alignment and structure |
| >pdb|2R3A|A Chain A, Methyltransferase Domain Of Human Suppressor Of Variegation 3-9 Homolog 2 Length = 300 | Back alignment and structure |
| >pdb|3F9Z|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y245f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|3F9W|A Chain A, Structural Insights Into Lysine Multiple Methylation By Set Domain Methyltransferases, Set8-Y334f H4-Lys20 ADOHCY Length = 166 | Back alignment and structure |
| >pdb|4IJ8|A Chain A, Crystal Structure Of The Complex Of Setd8 With Sam Length = 165 | Back alignment and structure |
| >pdb|1ZKK|A Chain A, Crystal Structure Of Hset8 In Ternary Complex With H4 Peptide (16-24) And Adohcy Length = 167 | Back alignment and structure |
| >pdb|2BQZ|A Chain A, Crystal Structure Of A Ternary Complex Of The Human Histone Methyltransferase Pr-Set7 (Also Known As Set8) Length = 161 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* Length = 192 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-24
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 21/152 (13%)
Query: 1842 KGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLER 1901
G G+ C + + V+E+ G V +K R +++ Y+ R
Sbjct: 62 HGRGLFCKRN--IDAGEMVIEYAGNVIR-SIQTDK----REKYYDSKG-----IGCYMFR 109
Query: 1902 PKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYTVRGIHYGEEI 1961
VVDA N A I HSC PNC ++V +DG I I+ +R I+ GEE+
Sbjct: 110 IDDS------EVVDATMHGNAARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEEL 163
Query: 1962 TFDYNSVTESKEEYEASVCLCGSQVCRGSYLN 1993
T+DY E + C CG++ CR +LN
Sbjct: 164 TYDYKFPIE--DASNKLPCNCGAKKCRK-FLN 192
|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} Length = 232 | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} Length = 222 | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 2bqz_A* Length = 166 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* Length = 302 | Back alignment and structure |
|---|
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} Length = 290 | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A Length = 299 | Back alignment and structure |
|---|
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* Length = 287 | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} Length = 300 | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} Length = 273 | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* Length = 119 | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} Length = 247 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* Length = 261 | Back alignment and structure |
|---|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A Length = 336 | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* Length = 149 | Back alignment and structure |
|---|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* Length = 592 | Back alignment and structure |
|---|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* Length = 594 | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* Length = 429 | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* Length = 433 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2396 | |||
| 3hna_A | 287 | Histone-lysine N-methyltransferase, H3 lysine-9 sp | 100.0 | |
| 3h6l_A | 278 | Histone-lysine N-methyltransferase SETD2; SET doma | 100.0 | |
| 3bo5_A | 290 | Histone-lysine N-methyltransferase setmar; SET dom | 100.0 | |
| 1ml9_A | 302 | Histone H3 methyltransferase DIM-5; adoMet-depende | 100.0 | |
| 1mvh_A | 299 | Cryptic LOCI regulator 4; lysine methyltransferase | 100.0 | |
| 3ope_A | 222 | Probable histone-lysine N-methyltransferase ASH1L; | 100.0 | |
| 3ooi_A | 232 | Histone-lysine N-methyltransferase, H3 lysine-36 l | 100.0 | |
| 2r3a_A | 300 | Histone-lysine N-methyltransferase SUV39H2; histon | 100.0 | |
| 2w5y_A | 192 | Histone-lysine N-methyltransferase HRX; transcript | 99.97 | |
| 3f9x_A | 166 | Histone-lysine N-methyltransferase SETD8; methyltr | 99.94 | |
| 2f69_A | 261 | Histone-lysine N-methyltransferase, H3 lysine-4 sp | 99.88 | |
| 3s8p_A | 273 | Histone-lysine N-methyltransferase SUV420H1; SET d | 99.88 | |
| 1n3j_A | 119 | A612L, histone H3 lysine methyltransferase; beta b | 99.85 | |
| 1h3i_A | 293 | Histone H3 lysine 4 specific methyltransferase; 2. | 99.84 | |
| 2qpw_A | 149 | PR domain zinc finger protein 2; methyltransferase | 99.83 | |
| 3rq4_A | 247 | Histone-lysine N-methyltransferase SUV420H2; suppr | 99.8 | |
| 3ep0_A | 170 | PR domain zinc finger protein 12; PR domain-contai | 99.55 | |
| 3db5_A | 151 | PR domain zinc finger protein 4; methyltransferase | 99.51 | |
| 3dal_A | 196 | PR domain zinc finger protein 1; methyltransferase | 99.49 | |
| 3ray_A | 237 | PR domain-containing protein 11; structural genomi | 99.29 | |
| 3ihx_A | 152 | PR domain zinc finger protein 10; PRDM10, methyltr | 99.2 | |
| 3qwp_A | 429 | SET and MYND domain-containing protein 3; SMYD3,SE | 98.38 | |
| 3n71_A | 490 | Histone lysine methyltransferase SMYD1; heart deve | 98.38 | |
| 3qww_A | 433 | SET and MYND domain-containing protein 2; methyltr | 98.24 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 97.53 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 97.32 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 96.45 | |
| 1fs1_A | 53 | SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, L | 96.0 | |
| 3qxy_A | 449 | N-lysine methyltransferase SETD6; epigenetics, pro | 95.49 | |
| 1wh2_A | 78 | Hypothetical protein AT5G08430; GYF domain, struct | 95.48 | |
| 2h21_A | 440 | Ribulose-1,5 bisphosphate carboxylase/oxygenase; S | 94.84 | |
| 3k3v_A | 100 | Protein SMY2; GYF domain, poly-proline binding, do | 94.14 | |
| 3smt_A | 497 | Histone-lysine N-methyltransferase SETD3; histone | 92.19 | |
| 2i7k_A | 117 | Bromodomain-containing protein 7; helix, LEFT-hand | 88.63 | |
| 3dai_A | 130 | ATPase family AAA domain-containing protein 2; anc | 86.19 | |
| 3d7c_A | 112 | General control of amino acid synthesis protein 5; | 86.01 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 85.36 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 85.18 | |
| 2d9e_A | 121 | Peregrin; four-helix bundle, transcription activat | 84.62 | |
| 3rcw_A | 135 | Bromodomain-containing protein 1; transcription, s | 84.04 | |
| 3k3v_A | 100 | Protein SMY2; GYF domain, poly-proline binding, do | 83.44 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 83.23 | |
| 1wh2_A | 78 | Hypothetical protein AT5G08430; GYF domain, struct | 82.4 | |
| 2dkw_A | 131 | Hypothetical protein KIAA1240; bromodomain-like, f | 82.14 | |
| 3hme_A | 123 | Bromodomain-containing protein 9; BRD9, bromodomai | 81.65 | |
| 3l2o_B | 312 | F-box only protein 4; small G protein fold, UBL co | 81.3 | |
| 3ljw_A | 120 | Protein polybromo-1; alpha helix, alternative spli | 80.54 |
| >3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-37 Score=350.02 Aligned_cols=249 Identities=18% Similarity=0.182 Sum_probs=177.7
Q ss_pred hhhcccccchh--hhhhhcc-ccCCCccccCCcCcccccccccccCCc----cceeeecccCccCcccccccCCCccccc
Q 000079 1692 RRKMRVSLPED--YAEKLNA-QKNGSEELDMELPEVKDYKPRKQLGDQ----VFEQEVYGIDPYTHNLLLDSMPDELDWN 1764 (2396)
Q Consensus 1692 ~~km~v~lpd~--~~Ekl~~-~~ngt~e~~~~~PelK~Y~prKvLG~D----ViEqel~GcDcyTr~~I~~sLP~el~Ws 1764 (2396)
+.+++|+++|. +.|.+|+ ++|.+| +-..|.-++|.++.+++.. .......||+|.. .|....|+|
T Consensus 25 ~~~~~~~~~Dis~G~E~~pi~~~N~vD--~~~~p~~f~Y~~~~~~~~~~~~~~~~~~~~gC~C~~-~C~~~~C~C----- 96 (287)
T 3hna_A 25 SPVERIVSRDIARGYERIPIPCVNAVD--SEPCPSNYKYVSQNCVTSPMNIDRNITHLQYCVCID-DCSSSNCMC----- 96 (287)
T ss_dssp CCCCEEEESCTTTTCSSSCCCEEESSS--SCCCCCSSEECSSCEESSCCCCCCBGGGCCCCCCSS-SSCSTTCHH-----
T ss_pred cccCCEEhHhhCCCCCCCCEEEEeCCC--CCCCCCCcEEccccccCCCccccccCCCCCCCcCcC-CCCCCCCcC-----
Confidence 44577888886 9999999 999998 4456888888887665542 2234567999974 333222322
Q ss_pred hhhhchhhHHHHHHHHhhhccccCCCCCCCCC--CCCCCccccc-CCcCccCCCchhhhcccccccccccCCCcceecCC
Q 000079 1765 LLEKHLFIEDVLLRTLNKQVRHFTGTGNTPMM--YPLQPVIEEI-EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYR 1841 (2396)
Q Consensus 1765 ~~qKn~FIek~LL~tLNkqvRhf~G~g~tP~~--c~ckPViEC~-eC~Cge~C~NRllQ~Cq~ilk~i~r~PleVFrT~~ 1841 (2396)
.+.+. .......|.- .+.. .....++||. .|.|+..|.||++|.+.. .++++|.+..
T Consensus 97 -~~~~~-----------~~~y~~~g~l-~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~-------~~l~v~~t~~ 156 (287)
T 3hna_A 97 -GQLSM-----------RCWYDKDGRL-LPEFNMAEPPLIFECNHACSCWRNCRNRVVQNGLR-------ARLQLYRTRD 156 (287)
T ss_dssp -HHHTS-----------SCCBCTTSCB-CTTCCSSSCCCEECCCTTSSSCTTCSSCSGGGCCC-------SCEEEEECSS
T ss_pred -cccCc-----------ccccCCCCcc-cccccccCCceEEecCCCCCCCCCCCCcccCcCCc-------ccEEEEEcCC
Confidence 11110 0000001110 1111 1122368995 899999999999987543 4789999999
Q ss_pred ccceEEeCccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCcceEEeecCCCCCCCCCceEEEcCcccCC
Q 000079 1842 KGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGYDLVVVDAMHKAN 1921 (2396)
Q Consensus 1842 KGwGVFAteDegI~KGEFI~EYVGEVIt~eE~~ERqd~IRrlq~d~kd~~~dFY~myL~r~~gD~dGyd~lvIDATrkGN 1921 (2396)
|||||||+++ |++|+||+||+|||++..++..+ ..+.|.+.+....+ ..++|||+.+||
T Consensus 157 kG~Gv~A~~~--I~~G~~I~eY~Gevi~~~e~~~r--------------~~~~Y~f~l~~~~~-----~~~~IDa~~~GN 215 (287)
T 3hna_A 157 MGWGVRSLQD--IPPGTFVCEYVGELISDSEADVR--------------EEDSYLFDLDNKDG-----EVYCIDARFYGN 215 (287)
T ss_dssp SSEEEEESSC--BCTTCEEEEECEEEEEHHHHHTC--------------SCCTTEEESCCSSS-----SCEEEEEEEEEC
T ss_pred CceEEEeCcc--cCCCCEEEEeeeEEccHHHHhhh--------------cccceEEEeccCCC-----ceEEEeccccCC
Confidence 9999999987 99999999999999986543221 12346555554322 248999999999
Q ss_pred cccccCCCCCCCeEEEEEEECC----EEEEEEEEcCCCCCCCeEEEecCCCCCCcccccCeeEEeCCCCcccc
Q 000079 1922 YASRICHSCRPNCEAKVTAVDG----HYQIGIYTVRGIHYGEEITFDYNSVTESKEEYEASVCLCGSQVCRGS 1990 (2396)
Q Consensus 1922 iARFINHSCdPNCeaq~v~VnG----e~RIgfFAlRDI~pGEELTFDYg~~~eskeE~ek~~CLCGS~nCRGs 1990 (2396)
+||||||||+|||.++.+++.+ .++|+|||+|||++||||||||+..++... ...+.|+|||++|||+
T Consensus 216 ~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~-~~~~~C~CGs~~CRgs 287 (287)
T 3hna_A 216 VSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIK-GKLFSCRCGSPKCRHS 287 (287)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHH-TTTCCCCCCCTTCSCC
T ss_pred chheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccC-CCcCEeeCCCCCCCCC
Confidence 9999999999999998776654 479999999999999999999997554322 2468999999999984
|
| >3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens} | Back alignment and structure |
|---|
| >1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A* | Back alignment and structure |
|---|
| >1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A | Back alignment and structure |
|---|
| >3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens} | Back alignment and structure |
|---|
| >2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A* | Back alignment and structure |
|---|
| >3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A* | Back alignment and structure |
|---|
| >2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A* | Back alignment and structure |
|---|
| >3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A* | Back alignment and structure |
|---|
| >1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A | Back alignment and structure |
|---|
| >2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A* | Back alignment and structure |
|---|
| >3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
| >3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens} | Back alignment and structure |
|---|
| >3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A* | Back alignment and structure |
|---|
| >3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus} | Back alignment and structure |
|---|
| >3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A* | Back alignment and structure |
|---|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
| >1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E | Back alignment and structure |
|---|
| >3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A* | Back alignment and structure |
|---|
| >1wh2_A Hypothetical protein AT5G08430; GYF domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} SCOP: d.76.1.1 | Back alignment and structure |
|---|
| >2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A* | Back alignment and structure |
|---|
| >3k3v_A Protein SMY2; GYF domain, poly-proline binding, domain SWAP, ragnya, phosphoprotein, protein binding; 1.80A {Saccharomyces cerevisiae} PDB: 3fma_A | Back alignment and structure |
|---|
| >3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens} | Back alignment and structure |
|---|
| >2i7k_A Bromodomain-containing protein 7; helix, LEFT-handed four-helix bundle, transcription; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3dai_A ATPase family AAA domain-containing protein 2; ancca, AAA+ nuclear coregulator cancer-associated Pro2000 protein, two AAA DOMA containing protein; 1.95A {Homo sapiens} PDB: 3lxj_A | Back alignment and structure |
|---|
| >3d7c_A General control of amino acid synthesis protein 5; GCN5, bromodomain, structural genomics consortium, SGC, HOST-virus interaction, nucleus; 2.06A {Homo sapiens} SCOP: a.29.2.1 PDB: 1f68_A 1jm4_B* 1n72_A 1wug_A* 1wum_A* 1zs5_A* 2rnw_A* 2rnx_A* 3gg3_A | Back alignment and structure |
|---|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
| >2d9e_A Peregrin; four-helix bundle, transcription activator, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3rcw_A Bromodomain-containing protein 1; transcription, structural genomics, structural consortium, SGC; 2.21A {Homo sapiens} | Back alignment and structure |
|---|
| >3k3v_A Protein SMY2; GYF domain, poly-proline binding, domain SWAP, ragnya, phosphoprotein, protein binding; 1.80A {Saccharomyces cerevisiae} PDB: 3fma_A | Back alignment and structure |
|---|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
| >1wh2_A Hypothetical protein AT5G08430; GYF domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Arabidopsis thaliana} SCOP: d.76.1.1 | Back alignment and structure |
|---|
| >2dkw_A Hypothetical protein KIAA1240; bromodomain-like, five-helix, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3hme_A Bromodomain-containing protein 9; BRD9, bromodomain containing 9 isoform 1, LAVS3040, rhabdomyosarcoma antigen MU-RMS-40.8; 2.23A {Homo sapiens} | Back alignment and structure |
|---|
| >3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3ljw_A Protein polybromo-1; alpha helix, alternative splicing, bromodomain, chromatin RE DNA-binding, nucleus, phosphoprotein, transcription; 1.50A {Homo sapiens} PDB: 2ktb_B* 3hmf_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 2396 | ||||
| d1ml9a_ | 284 | b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [T | 7e-16 | |
| d2f69a2 | 171 | b.85.7.1 (A:194-364) Histone H3 K4-specific methyl | 1e-10 | |
| d1mvha_ | 269 | b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (S | 6e-10 | |
| d2g46a1 | 119 | b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Meth | 3e-07 | |
| d1fs1a1 | 41 | a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [ | 0.004 |
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} Length = 284 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: Dim-5 species: Fungus (Neurospora crassa) [TaxId: 5141]
Score = 78.4 bits (192), Expect = 7e-16
Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 8/153 (5%)
Query: 1841 RKGLGVVCNKEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLE 1900
+G GV C FV +LGE+ + +++ ++ + +
Sbjct: 134 DRGWGVKCPVN--IKRGQFVDRYLGEIIT-SEEADRRRAESTIARRKDVYLFALDKFSDP 190
Query: 1901 RPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGH----YQIGIYTVRGIH 1956
+ VD + + I HSC PN D + + ++ ++ I
Sbjct: 191 DSLDPLLAGQPLEVDGEYMSGPTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIP 250
Query: 1957 YGEEITFDYNSVTESKE-EYEASVCLCGSQVCR 1988
G E+TFDY + E + + C
Sbjct: 251 KGTELTFDYVNGLTGLESDAHDPSKISEMTKCL 283
|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 269 | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} Length = 119 | Back information, alignment and structure |
|---|
| >d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 41 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 2396 | |||
| d1ml9a_ | 284 | Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | 99.98 | |
| d1mvha_ | 269 | SET domain of Clr4 {Fission yeast (Schizosaccharom | 99.97 | |
| d2f69a2 | 171 | Histone H3 K4-specific methyltransferase SET7/9 ca | 99.84 | |
| d2g46a1 | 119 | Viral histone H3 Lysine 27 Methyltransferase {Para | 99.73 | |
| d2h2ja2 | 261 | RuBisCo LSMT catalytic domain {Garden pea (Pisum s | 97.69 | |
| d1fs1a1 | 41 | Skp2 {Human (Homo sapiens) [TaxId: 9606]} | 96.43 | |
| d1nexb1 | 100 | Cdc4 F-box and linker domains {Baker's yeast (Sacc | 94.06 | |
| d1wh2a_ | 78 | Hypothetical rotein At5g08430 {Thale cress (Arabid | 93.61 | |
| d2ovrb1 | 102 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 93.32 | |
| d1p22a1 | 118 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 91.98 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 90.68 | |
| d1wuma1 | 118 | P300/CAF histone acetyltransferase bromodomain {Hu | 86.2 | |
| d1wh2a_ | 78 | Hypothetical rotein At5g08430 {Thale cress (Arabid | 83.92 | |
| d1e6ia_ | 111 | GCN5 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 82.53 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 82.42 |
| >d1ml9a_ b.85.7.1 (A:) Dim-5 {Fungus (Neurospora crassa) [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-clip superfamily: SET domain family: Histone lysine methyltransferases domain: Dim-5 species: Fungus (Neurospora crassa) [TaxId: 5141]
Probab=99.98 E-value=4.2e-33 Score=314.43 Aligned_cols=250 Identities=20% Similarity=0.276 Sum_probs=155.1
Q ss_pred hhcc-ccCCCccccCCcCcccccccccccCCcccee---eecccCccCcc-cccccCCCccccchhhhc--hhhHHHHHH
Q 000079 1706 KLNA-QKNGSEELDMELPEVKDYKPRKQLGDQVFEQ---EVYGIDPYTHN-LLLDSMPDELDWNLLEKH--LFIEDVLLR 1778 (2396)
Q Consensus 1706 kl~~-~~ngt~e~~~~~PelK~Y~prKvLG~DViEq---el~GcDcyTr~-~I~~sLP~el~Ws~~qKn--~FIek~LL~ 1778 (2396)
+||+ ++|.+| +-.+|.-+.|.++.+.+..+... ...||+|.... +....++| .++. .+... .+
T Consensus 1 ~~pi~~~N~vd--~~~~p~~f~Yi~~~~~~~~~~~~~~~~~~gC~C~~~~~c~~~~C~C------~~~~~~~~~~~--~~ 70 (284)
T d1ml9a_ 1 QLPISIVNRED--DAFLNPNFRFIDHSIIGKNVPVADQSFRVGCSCASDEECMYSTCQC------LDEMAPDSDEE--AD 70 (284)
T ss_dssp CCCEEEECSSS--SCCCCTTCEECSSCEECTTCCCCCGGGCCCCCCSSTTGGGSTTSGG------GTTSCCC--------
T ss_pred CCCEEEEeCCC--CCCCCCCCEECccEEeCCCCccCCccCCCCCCCcCCCCcCCCCCcC------hhhcCcccccc--cc
Confidence 3667 889988 44577778888887776654322 24599997642 23333443 1111 01000 00
Q ss_pred HHhhhccccCC--CCCCCC------CCCCCCccccc-CCcCccCCCchhhhcccccccccccCCCcceecCCccceEEeC
Q 000079 1779 TLNKQVRHFTG--TGNTPM------MYPLQPVIEEI-EKEAVDDCDVRTMKMCRGILKAMDSRPDDKYVAYRKGLGVVCN 1849 (2396)
Q Consensus 1779 tLNkqvRhf~G--~g~tP~------~c~ckPViEC~-eC~Cge~C~NRllQ~Cq~ilk~i~r~PleVFrT~~KGwGVFAt 1849 (2396)
. ......+.. .+.... .....+++||. .|.|+..|.||++|.+.. .+++||++..|||||||+
T Consensus 71 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~EC~~~C~C~~~C~Nr~~q~g~~-------~~lev~kt~~kG~Gv~a~ 142 (284)
T d1ml9a_ 71 P-YTRKKRFAYYSQGAKKGLLRDRVLQSQEPIYECHQGCACSKDCPNRVVERGRT-------VPLQIFRTKDRGWGVKCP 142 (284)
T ss_dssp ------CCSSBBCSSTTBTSBCHHHHHHCCCEECCCTTCSSCTTCTTCHHHHCCC-------SCEEEEECSSSCEEEECS
T ss_pred c-cccccccccccccccccccccccccCCCceeCCCCCCCcCCCCCCeeccCCCc-------cCEEEEEcCCCceEEeeC
Confidence 0 000000100 000000 00123468995 899999999999987543 478999999999999999
Q ss_pred ccCCcCCCCEEEEEecEEecchhhhhhhhhhHhhhcCCCCCCCcceEEeecCCCCCCCCC------ceEEEcCcccCCcc
Q 000079 1850 KEGGFGEDDFVVEFLGEVYPVWKWFEKQDGIRSLQKNNEDPAPEFYNIYLERPKGDADGY------DLVVVDAMHKANYA 1923 (2396)
Q Consensus 1850 eDegI~KGEFI~EYVGEVIt~eE~~ERqd~IRrlq~d~kd~~~dFY~myL~r~~gD~dGy------d~lvIDATrkGNiA 1923 (2396)
++ |++|+||+||+||||+..++.++.. .+......+.|.+.+..... .... ..++|||+..||+|
T Consensus 143 ~~--I~kGt~I~eY~Gevi~~~ea~~~~~------~~~~~~~~~~y~~~l~~~~~-~~~~~~~~~~~~~~iDa~~~GN~a 213 (284)
T d1ml9a_ 143 VN--IKRGQFVDRYLGEIITSEEADRRRA------ESTIARRKDVYLFALDKFSD-PDSLDPLLAGQPLEVDGEYMSGPT 213 (284)
T ss_dssp SC--BCTTCEEEECCCEEECHHHHHHHHH------HSCGGGCHHHHEEECCSSCC-SSSSCHHHHSCCCEEECSSEECGG
T ss_pred CC--cCCCCEEEEecCcccCHHHHHHHHH------HHHhhccCCccceecccccc-cccccccccCCceeEeeeeccchh
Confidence 87 9999999999999999765543322 11122234556665543221 1111 23689999999999
Q ss_pred cccCCCCCCCeEEEEEEECC----EEEEEEEEcCCCCCCCeEEEecCCCCCCcc--------cccCeeEEe
Q 000079 1924 SRICHSCRPNCEAKVTAVDG----HYQIGIYTVRGIHYGEEITFDYNSVTESKE--------EYEASVCLC 1982 (2396)
Q Consensus 1924 RFINHSCdPNCeaq~v~VnG----e~RIgfFAlRDI~pGEELTFDYg~~~eske--------E~ek~~CLC 1982 (2396)
|||||||+|||+++.+.+++ .++|+|||+|||++||||||||+..+.+.. ....+.|+|
T Consensus 214 RfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dYg~~~~~~~~~~~~~~~~~~~~~C~C 284 (284)
T d1ml9a_ 214 RFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLC 284 (284)
T ss_dssp GGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC-----------------------
T ss_pred heeeccccCCcceEEEEeccCCCCceEEEEEECCccCCCCEEEEecCCCCCCchhhcchhhcccCCceeeC
Confidence 99999999999999988875 489999999999999999999997654321 123467888
|
| >d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
| >d2f69a2 b.85.7.1 (A:194-364) Histone H3 K4-specific methyltransferase SET7/9 catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2g46a1 b.85.7.2 (A:1-119) Viral histone H3 Lysine 27 Methyltransferase {Paramecium bursaria chlorella virus 1, PBCV-1 [TaxId: 10506]} | Back information, alignment and structure |
|---|
| >d2h2ja2 b.85.7.3 (A:50-310) RuBisCo LSMT catalytic domain {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
| >d1fs1a1 a.158.1.1 (A:109-149) Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1nexb1 a.158.1.1 (B:270-369) Cdc4 F-box and linker domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1wh2a_ d.76.1.1 (A:) Hypothetical rotein At5g08430 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2ovrb1 a.158.1.1 (B:2263-2364) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p22a1 a.158.1.1 (A:135-252) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wuma1 a.29.2.1 (A:715-832) P300/CAF histone acetyltransferase bromodomain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wh2a_ d.76.1.1 (A:) Hypothetical rotein At5g08430 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
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| >d1e6ia_ a.29.2.1 (A:) GCN5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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