Citrus Sinensis ID: 000172
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1935 | 2.2.26 [Sep-21-2011] | |||||||
| Q9M3G7 | 3856 | Serine/threonine-protein | yes | no | 0.993 | 0.498 | 0.641 | 0.0 | |
| Q62388 | 3066 | Serine-protein kinase ATM | yes | no | 0.651 | 0.411 | 0.328 | 0.0 | |
| Q6PQD5 | 3057 | Serine-protein kinase ATM | yes | no | 0.647 | 0.409 | 0.325 | 0.0 | |
| Q13315 | 3056 | Serine-protein kinase ATM | yes | no | 0.644 | 0.408 | 0.322 | 0.0 | |
| Q4WVM7 | 2796 | Serine/threonine-protein | yes | no | 0.372 | 0.257 | 0.351 | 1e-123 | |
| Q4IB89 | 2813 | Serine/threonine-protein | yes | no | 0.531 | 0.365 | 0.286 | 1e-119 | |
| Q2U639 | 2925 | Serine/threonine-protein | yes | no | 0.339 | 0.224 | 0.356 | 1e-115 | |
| O74630 | 2812 | Serine/threonine-protein | yes | no | 0.522 | 0.359 | 0.275 | 1e-114 | |
| Q5BHE2 | 2793 | Serine/threonine-protein | yes | no | 0.361 | 0.250 | 0.340 | 1e-112 | |
| Q7RZT9 | 2939 | Serine/threonine-protein | N/A | no | 0.389 | 0.256 | 0.315 | 1e-112 |
| >sp|Q9M3G7|ATM_ARATH Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana GN=ATM PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 2622 bits (6795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1298/2022 (64%), Positives = 1572/2022 (77%), Gaps = 99/2022 (4%)
Query: 1 MLQDPDYRVRLFLARRIGVLFQTWDGHGELFQDICSNFGVVLVVCSNEKLVTAKEALASG 60
ML D DYRVR LAR+IG+LFQTWDGH LFQDICS+FG+ LV S EKLVTAK+ LA G
Sbjct: 1847 MLSDSDYRVRFVLARQIGILFQTWDGHEALFQDICSSFGIKLVTSSKEKLVTAKDVLAVG 1906
Query: 61 PQSRPKMETIIITLMHLALQSESVELEAVFMMCTVSALYPCQRELVNVALDNLSQQLQYT 120
PQ R KMET+IITLMHLA SE++EL+AVFMMC VSA PCQREL+ ALDNLS QL Y
Sbjct: 1907 PQPRQKMETVIITLMHLAYHSENIELQAVFMMCAVSAKDPCQRELIIAALDNLSAQLHYP 1966
Query: 121 TRWKYLEELLGPILFCWVACGVSLIALVEIRRLFVSDAEPCNFVQYCCHWLLPALVLHAD 180
+R+KYLEELLGPILF W+A GVSL L+E +LF+ +AEP F+ +C HWLLPAL+LH D
Sbjct: 1967 SRFKYLEELLGPILFHWIASGVSLAGLIETSQLFIPNAEPKYFIHFCSHWLLPALLLHED 2026
Query: 181 TSNLNWMAKIAREPLADLVKNHFVPIFSISMAWHCSERSDSELGALVLQSSILHLAEISE 240
+NL+W+AK+A +P+ LVK +FVPIFSI M HCS+ S+ + GA+VLQ+SIL++ E SE
Sbjct: 2027 HTNLDWVAKMAGQPVVVLVKENFVPIFSICMGLHCSKTSECDKGAMVLQNSILYVGETSE 2086
Query: 241 IERDKLIKKHLVSIVSHIISLASCTSDPAVPYFSRDTIVHAVRTVVDGFLEMQDCPRSAG 300
ERDKLIK+++VSIVS I+S AS + +P VP FSRDTI AV+TVVDGFLE D P++A
Sbjct: 2087 NERDKLIKQNMVSIVSFILSCASSSPEPPVPTFSRDTISLAVQTVVDGFLENTDYPKNAA 2146
Query: 301 VVDKINVFRPDRVFMFIVELHYKIAAAVHHRHKCHRLAGVEVLINVLGHRAAVSSASNYL 360
+ D+IN+FRPDRVFMFI E+HY+++AA HHRH H LA +E L +LGHRA V S+ NY+
Sbjct: 2147 ITDRINIFRPDRVFMFITEMHYRMSAACHHRHTRHHLAALEELTILLGHRALVPSSLNYI 2206
Query: 361 FNLVGQFIGVYALQDQCCRIVSALLKAFRDNPSKEIVNVLGEQLQFLVSKLVACCIPSEA 420
FNLVGQFIG +LQDQCC I S LL F+ NP+KEIV+VLG+QLQFLVSKLV CCI +EA
Sbjct: 2207 FNLVGQFIGYPSLQDQCCSIASCLLDLFKSNPAKEIVSVLGDQLQFLVSKLVTCCIDAEA 2266
Query: 421 NEP-SVSRSSQVLSLLLQLTVDSDPSLHDYIRELEPFPEIDIFDGIRSFHEELCQAYSAR 479
+ S ++SSQ+++LL +L V SD SL++ IR+LEP P++ F IR H +C+AYS R
Sbjct: 2267 DTKISGAKSSQLVNLLHKLVVSSDSSLNEDIRDLEPLPDLKYFQVIRESHIRICEAYSPR 2326
Query: 480 DHLLK----------FVQ---------------RACNLPSRLLPWRWF------------ 502
+HLLK F++ + C+ S LP R+
Sbjct: 2327 NHLLKVEHSTFLIYIFLEILSLSNFLFLSCSTIQQCSRRSNYLPPRFLSRSLQALHNKLI 2386
Query: 503 ---VTPNDASSIRA---WVSD----------------------------FISRVGIGDPH 528
V+ D + A W SD F+SR+GI DPH
Sbjct: 2387 ASEVSQEDTNGETAETFWQSDDEIVNAVWTLVRVSASDEADSMRLLVSDFLSRIGIRDPH 2446
Query: 529 CVVFHLPRDSIYMHACRPINHGSGSATEFNFHLDAGISEELLIAVLKILKKYLMDDSVQI 588
VVFHLP + + MH + H +GS + + GIS+E LI +L LKKYL+DDSV+I
Sbjct: 2447 TVVFHLPGNLVSMHGLQGFGHNTGS--KVRSLTENGISDETLITLLNFLKKYLLDDSVKI 2504
Query: 589 VDMTSQTLRGILSTEKGQRAVMSFDSYERSLLEVHSKGVNVELVETFLLDLERKFKVFWV 648
+D+TSQTLRGILSTE+GQ+A+ SFDS ER+L+EVH +GVN+++VE LLD +++FK
Sbjct: 2505 IDVTSQTLRGILSTERGQQALSSFDSCERALIEVHGRGVNLDIVEKILLDSQKQFK---- 2560
Query: 649 SLSANGISPEKSTVWETDGKTFETWICPLTYSLIGCCNDVVLRLCQDIVLLKSEVAELLL 708
A S E VW TD K F+ WIC L Y +I C DV +RLCQ+I LLK+E++ELL
Sbjct: 2561 ---AEKFSLETPEVWSTDNKNFDRWICQLVYCMIALCEDVPIRLCQNIALLKAEISELLF 2617
Query: 709 PSVVVNLAGSKNVDVDLQKLISSQVQKYIFTESNKLIKSIQVFLNALNELRLCHVMERS- 767
PSVVV+LAG +D++L LI+SQV+++IFT+SNKL KS QV LN LNELR+C+V+ERS
Sbjct: 2618 PSVVVSLAGRIGMDINLHDLITSQVKEHIFTDSNKLTKSKQVMLNTLNELRMCYVLERSI 2677
Query: 768 SSVPPKRETIGVMQFNGRYSKDVVATSN---ATMTTSWDKVYWLSVDYLRVAKSAVICGS 824
S KRE +DV + SN A++TT+W+KVYWLS+DYL VA SAV+CG+
Sbjct: 2678 FSGQTKREKNSRSCSTAAKIRDVESGSNGMAASITTNWEKVYWLSIDYLVVAGSAVVCGA 2737
Query: 825 YFTSVMYVEHWCEEHYKSLTLGSPDFSHLETLPRHIEILVSAVTQINEPDSLYGIIQSHK 884
Y T+ MYVE+WCEE + +L+LG PDFS+ + LP H+EILVSA+T+INEPDSLYG+I S+K
Sbjct: 2738 YLTASMYVEYWCEEKFGNLSLGDPDFSYHDKLPDHVEILVSAITRINEPDSLYGVIHSNK 2797
Query: 885 LSSQIVTLEHEGNWSKALEYYELQVRSDVMLQMDGNSGALSPHGL-PSVHLSPSTSENEM 943
LS+QI+T EHEGNW++ALEYY+LQ RS M+ S L P+ S
Sbjct: 2798 LSAQIITFEHEGNWTRALEYYDLQARSQKMVVPSSLSENLEVEQFQPTTSARHSVFGEGE 2857
Query: 944 MQRKPYKGLMRSLQQVGCMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSL 1003
+QR+P+KGL+RSLQQ GCMHVLD+YC+GLTS +G FQ+DPEF +LQYEAAWR G WDFSL
Sbjct: 2858 VQRQPFKGLIRSLQQTGCMHVLDLYCRGLTSREGCFQYDPEFIELQYEAAWRAGKWDFSL 2917
Query: 1004 PYLGANFPSGQNIKSGHFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEEST 1063
Y + Q+ K+ ++HE+LH CL AL+EGD + FY KLK +K+ELVLS++ ASEEST
Sbjct: 2918 LYPQTHCQPLQHAKNNNYHESLHCCLRALQEGDYDGFYGKLKDTKKELVLSISRASEEST 2977
Query: 1064 EYIYSAIVKLQILCHLGVAWDIRW-KSSGESINIYPEKQKIVSEPVIPTVGQLSWLNTEW 1122
E+IYS +VKLQIL HLG+ WD+RW SS +S++ Y KQ +PVIPT+ QLSWLN +W
Sbjct: 2978 EFIYSTVVKLQILHHLGLVWDLRWTTSSHQSVHGYLVKQMACVDPVIPTMDQLSWLNKDW 3037
Query: 1123 SSILKRTQLHMNLLEPFMAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAALHE 1182
+SI+ +TQLHM LLEPF+AFRRVLLQIL C+ TMQHLL+SAS LRKG R S AAA+LHE
Sbjct: 3038 NSIITQTQLHMTLLEPFIAFRRVLLQILGCEKCTMQHLLQSASLLRKGTRFSHAAASLHE 3097
Query: 1183 LK--CSIFHMIIEQSPLPHLLN------LLRAQGQHEMAINLAKYISENYESNEEAPDVY 1234
K C+ + Q P+P L LL AQG+HE++I+LA YI NY+ EEA D+Y
Sbjct: 3098 FKFLCARSN---GQQPVPDWLGKLEEAKLLHAQGRHEVSISLANYILHNYQLKEEASDIY 3154
Query: 1235 RLVGKWLAESRSSNSRIILENYLKPAVSFSEDQRTTD-KKSIERQCQTHFHLAHYADALF 1293
R++GKWLAE+RSSNSR ILE YL+PAVS +E+Q + K+ ++RQ QT FHLAHYADALF
Sbjct: 3155 RVIGKWLAETRSSNSRTILEKYLRPAVSLAEEQSSKICKRLVDRQSQTWFHLAHYADALF 3214
Query: 1294 KSYEERLASNEWQAAMRLRKHKTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLAMDRE 1353
KSYEERL+S+EWQAA+RLRKHKT ELE IKR KSS K E++DYS+KIQ+LQKQL MD+E
Sbjct: 3215 KSYEERLSSSEWQAALRLRKHKTKELEVFIKRFKSSKKAEQSDYSLKIQDLQKQLTMDKE 3274
Query: 1354 EAQKLLDDRDNFLGLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVIKNMVDTID 1413
EA+KL DRDNFL LALEGYKRCL IGDKYDVRVVFR VS+WFSL+S++NVI NM+ TI
Sbjct: 3275 EAEKLQVDRDNFLKLALEGYKRCLEIGDKYDVRVVFRQVSMWFSLASQKNVIDNMLSTIK 3334
Query: 1414 EVQSYKFIPLVYQIASRMGSTKDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGD 1473
EVQSYKFIPLVYQIASR+GS+KD G ++FQ ALVSL++KMAIDHPYHTI QLLALANGD
Sbjct: 3335 EVQSYKFIPLVYQIASRLGSSKDESGSNSFQSALVSLIRKMAIDHPYHTILQLLALANGD 3394
Query: 1474 RIKDKQRSRNSFVVDMDKKLAAENLLEELSSYHGAIIRQMKQMVDVYIKLAELETRREDT 1533
RIKD QRSRNSFVVDMDKKLAAE+LL+++S YHG +IRQMKQ+VD+YIKLAELETRREDT
Sbjct: 3395 RIKDNQRSRNSFVVDMDKKLAAEHLLQDVSHYHGPMIRQMKQLVDIYIKLAELETRREDT 3454
Query: 1534 NKRIQLPREIRCLRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLAESVMVMNGINAPKV 1593
N+++ LPREIR ++QLELVPVVTAT+P+D +CQYNEGSFP+F+GL++SV VMNGINAPKV
Sbjct: 3455 NRKVALPREIRSVKQLELVPVVTATIPVDRSCQYNEGSFPFFRGLSDSVTVMNGINAPKV 3514
Query: 1594 VECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPF 1653
VECFGSDG KY+QLAKSGNDDLRQDAVMEQFFGLVNTFL N+RDTWKRRL VRTYKV+PF
Sbjct: 3515 VECFGSDGQKYKQLAKSGNDDLRQDAVMEQFFGLVNTFLHNNRDTWKRRLAVRTYKVIPF 3574
Query: 1654 TPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDKRIAFQEV 1713
TPSAG+LEWVDGT+PLGDYLIGS+R+ GAHGRYGIG+W + KCREHMS+ KDKR AF +V
Sbjct: 3575 TPSAGVLEWVDGTIPLGDYLIGSSRSEGAHGRYGIGNWKYPKCREHMSSAKDKRKAFVDV 3634
Query: 1714 CENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATA 1773
C NFRPV+HYFFLE+FLQPA WF KRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATA
Sbjct: 3635 CTNFRPVMHYFFLEKFLQPADWFVKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATA 3694
Query: 1774 EVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGVFRRCCEKTLSVMRTNKE 1833
EVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMG+TGVEGVFRRCCE+TLSVMRTNKE
Sbjct: 3695 EVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGITGVEGVFRRCCEETLSVMRTNKE 3754
Query: 1834 ALLTIVEVFIHDPLYKWALSPLKALQRQKEMDDDLETGLEGPEDEYEGNKDAERALIRVK 1893
ALLTIVEVFIHDPLYKWALSPLKALQRQKE +D LEG ++E+EGNKDA RAL+RVK
Sbjct: 3755 ALLTIVEVFIHDPLYKWALSPLKALQRQKETEDYDGMNLEGLQEEFEGNKDATRALMRVK 3814
Query: 1894 QKLDGYEGGEMRSVHGQVQQLIQDAIDPERFCLMFPGWGAWL 1935
QKLDGYEGGEMRS+HGQ QQLIQDAID +R MFPGWGAW+
Sbjct: 3815 QKLDGYEGGEMRSIHGQAQQLIQDAIDTDRLSHMFPGWGAWM 3856
|
Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR) or DNA replication stalling. Plays a central role in the perception and response to both stress-induced damage in somatic cells and developmentally programmed DNA damage during meiosis. Recognizes the substrate consensus sequence [ST]-Q. Phosphorylates histone variant H2AX to form H2AXS139ph at double strand breaks (DSBs), thereby regulating DNA damage response mechanism. Involved in transcriptional regulation of RAD51, PARP1, GR1, and LIG4 in response to DNA double strand breaks. Plays a dual role by activating the DNA damage response at dysfunctional telomeres and yet preventing this activation at functional telomeres. Not required for telomere length homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q62388|ATM_MOUSE Serine-protein kinase ATM OS=Mus musculus GN=Atm PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q6PQD5|ATM_PIG Serine-protein kinase ATM OS=Sus scrofa GN=ATM PE=3 SV=2 | Back alignment and function description |
|---|
| >sp|Q13315|ATM_HUMAN Serine-protein kinase ATM OS=Homo sapiens GN=ATM PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q4WVM7|ATM_ASPFU Serine/threonine-protein kinase tel1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=tel1 PE=3 SV=2 | Back alignment and function description |
|---|
| >sp|Q4IB89|ATM_GIBZE Serine/threonine-protein kinase TEL1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=TEL1 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q2U639|ATM_ASPOR Serine/threonine-protein kinase tel1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=tel1 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|O74630|ATM_SCHPO Serine/threonine-protein kinase tel1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tel1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q5BHE2|ATM_EMENI Serine/threonine-protein kinase tel1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=tel1 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q7RZT9|ATM_NEUCR Serine/threonine-protein kinase tel-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=tel-1 PE=3 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1935 | ||||||
| 359491245 | 2956 | PREDICTED: serine/threonine-protein kina | 0.991 | 0.648 | 0.754 | 0.0 | |
| 297733786 | 3085 | unnamed protein product [Vitis vinifera] | 0.994 | 0.623 | 0.733 | 0.0 | |
| 255540663 | 2954 | ataxia telangiectasia mutated, putative | 0.988 | 0.647 | 0.734 | 0.0 | |
| 356507238 | 3439 | PREDICTED: serine/threonine-protein kina | 0.992 | 0.558 | 0.702 | 0.0 | |
| 449441017 | 2985 | PREDICTED: LOW QUALITY PROTEIN: serine/t | 0.989 | 0.641 | 0.691 | 0.0 | |
| 56748564 | 3856 | RecName: Full=Serine/threonine-protein k | 0.993 | 0.498 | 0.641 | 0.0 | |
| 7529272 | 3856 | ataxia-telangiectasia mutated protein (A | 0.993 | 0.498 | 0.641 | 0.0 | |
| 240255538 | 3845 | serine/threonine-protein kinase [Arabido | 0.988 | 0.497 | 0.638 | 0.0 | |
| 222617585 | 2743 | hypothetical protein OsJ_00056 [Oryza sa | 0.967 | 0.682 | 0.574 | 0.0 | |
| 218187354 | 2732 | hypothetical protein OsI_00057 [Oryza sa | 0.965 | 0.683 | 0.575 | 0.0 |
| >gi|359491245|ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 3024 bits (7839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1500/1989 (75%), Positives = 1678/1989 (84%), Gaps = 71/1989 (3%)
Query: 1 MLQDPDYRVRLFLARRIGVLFQTWDGHGELFQDICSNFGVVLVVCSNEKLVTAKEALASG 60
ML+D DYRVR FLARRIGVLFQTWDGH ELFQDICSNFG+ LV+ KLVTAKE L +G
Sbjct: 985 MLRDQDYRVRFFLARRIGVLFQTWDGHDELFQDICSNFGIKLVMSLKGKLVTAKEVLDAG 1044
Query: 61 PQSRPKMETIIITLMHLALQSESVELEAVFMMCTVSALYPCQRELVNVALDNLSQQLQYT 120
PQ METIIITLMHLA+ SE +ELEAVFMMCTVSAL PCQRELV ALDNLS++LQYT
Sbjct: 1045 PQPHSTMETIIITLMHLAMYSEKMELEAVFMMCTVSALDPCQRELVLAALDNLSRKLQYT 1104
Query: 121 TRWKYLEELLGPILFCWVACGVSLIALVEIRRLFVSDAEPCNFVQYCCHWLLPALVLHAD 180
TR KYLEEL+G ILFCWV CGVSL+ALVEIR FV EP F+QYCCHWLLPAL+LH D
Sbjct: 1105 TRSKYLEELIGSILFCWVTCGVSLVALVEIRDHFVPSVEPTYFMQYCCHWLLPALLLHGD 1164
Query: 181 TSNLNWMAKIAREPLADLVKNHFVPIFSISMAWHCSERSDSELGALVLQSSILHLAEISE 240
TSNL W+A +A PLA LVKNHFVPIFS+ MA HCS++S E GA+VLQSSILH+AEISE
Sbjct: 1165 TSNLKWVASVAGLPLAVLVKNHFVPIFSVCMALHCSKKSGWEKGAVVLQSSILHVAEISE 1224
Query: 241 IERDKLIKKHLVSIVSHIISLASCTSDPAVPYFSRDTIVHAVRTVVDGFLEMQDCPRSAG 300
ERDKLIKK++VSIVS+I+SLASC S+PA+P+FSRDTIV A+R VVDGFLEM+DCP S G
Sbjct: 1225 DERDKLIKKYMVSIVSNILSLASCASEPALPFFSRDTIVLAIRNVVDGFLEMEDCPTSVG 1284
Query: 301 VVDKINVFRPDRVFMFIVELHYKIAAAVHHRHKCHRLAGVEVLINVLGHRAAVSSASNYL 360
VVDKIN+FR DRVFMFIVE+HYK+ AAVHHRHKCHRLA +EVLI+VLGHRAAVSS SNYL
Sbjct: 1285 VVDKINIFRSDRVFMFIVEMHYKVTAAVHHRHKCHRLADIEVLIDVLGHRAAVSSTSNYL 1344
Query: 361 FNLVGQFIGVYALQDQCCRIVSALLKAFRDNPSKEIVNVLGEQLQFLVSKLVACCIPSEA 420
FNLVGQF G ALQDQC RI+S LL++F+ NPSKEI+ V GEQLQFLVSKLVACCIPSE
Sbjct: 1345 FNLVGQFFGFNALQDQCSRIISMLLESFKSNPSKEIIGVPGEQLQFLVSKLVACCIPSET 1404
Query: 421 N-EPSVSRSSQVLSLLLQLTVDSDPSLHDYIRELEPFPEIDIFDGIRSFHEELCQAYSAR 479
N E S +RSSQVLSLL QLT+ +DPSL+DYIRELEPFPEIDIFD IR FH+ELC+AYS +
Sbjct: 1405 NAELSGTRSSQVLSLLHQLTIGADPSLYDYIRELEPFPEIDIFDEIREFHQELCRAYSPK 1464
Query: 480 DHLLKFVQRACNLPSRLLPWR--------------------------------------- 500
DH LKFV+R+ LP RLL W
Sbjct: 1465 DHFLKFVKRSSYLPPRLLLWSLQALHKKLLVGEICRGEKNVKDVIGDTCWRADQDIVHAV 1524
Query: 501 W----FVTPNDASSIRAWVSDFISRVGIGDPHCVVFHLPRDSIYMHACRPINHGSGSATE 556
W +DA+S+RA VSDFISRVGIGDPHCVVFHLP D +H CRPI+H SG+ E
Sbjct: 1525 WNLVHMCGSDDANSVRALVSDFISRVGIGDPHCVVFHLPGDYSQIHVCRPIHHDSGA--E 1582
Query: 557 FNFHLDAGISEELLIAVLKILKKYLMDDSVQIVDMTSQTLRGILSTEKGQRAVMSFDSYE 616
+F LD ISEELL+A++++LKKYLMDDSV+I+D+TSQTL GILSTE+GQ+A++SFDSYE
Sbjct: 1583 ISFPLDTSISEELLLALMRLLKKYLMDDSVKIIDLTSQTLWGILSTERGQKALLSFDSYE 1642
Query: 617 RSLLEVHSKGVNVELVETFLLDLERKFKVFWVSLSANGISPEKSTVWETDGKTFETWICP 676
RSL+EVHSKGVNVELVE L DLE+KF +A I EKST+W+T KTFE WICP
Sbjct: 1643 RSLIEVHSKGVNVELVEKLLSDLEKKF-------NAEAIPLEKSTIWKTHEKTFEMWICP 1695
Query: 677 LTYSLIGCCNDVVLRLCQDIVLLKSEVAELLLPSVVVNLAGSKNVDVDLQKLISSQVQKY 736
L +SLIG CND +LRLCQDIVLLK+EVAELLLP+V+VNLAG K++ VDL KLISSQVQ+
Sbjct: 1696 LVHSLIGFCNDTILRLCQDIVLLKAEVAELLLPNVIVNLAGRKDLAVDLCKLISSQVQEN 1755
Query: 737 IFTESNKLIKSIQVFLNALNELRLCHVMER--SSSVPPKRETIGVMQFNGRYSKDVVATS 794
IF ESN+ IKSIQV L+ALNELRL +VMER SSS+P KRET R + +++
Sbjct: 1756 IFVESNRSIKSIQVMLDALNELRLFYVMERTTSSSIPLKRET-------SRVNSSTMSSV 1808
Query: 795 NATMTTSWDKVYWLSVDYLRVAKSAVICGSYFTSVMYVEHWCEEHYKSLTLGSPDFSHLE 854
T+ W+KVYWLS+DYL VAKSA+ICGSYFTSVMYVEHWCEEH+ SLTLG PDFSH E
Sbjct: 1809 ALVSTSLWEKVYWLSIDYLDVAKSAIICGSYFTSVMYVEHWCEEHFNSLTLGKPDFSHCE 1868
Query: 855 TLPRHIEILVSAVTQINEPDSLYGIIQSHKLSSQIVTLEHEGNWSKALEYYELQVRSDVM 914
LP HIEILVSA+TQINEPDSLYGIIQ HKL+SQI+T EHEGNWSKALEYY+LQVRS+ +
Sbjct: 1869 MLPHHIEILVSAITQINEPDSLYGIIQLHKLTSQIITFEHEGNWSKALEYYDLQVRSEPV 1928
Query: 915 LQMDGNSGALSP-HGLPSVHLSPSTSENEMMQRKPYKGLMRSLQQVGCMHVLDMYCKGLT 973
MDG+S LSP H +VH S S SE+ + QR+PYKGL+RSLQ++GC HVLD+YC+GLT
Sbjct: 1929 AGMDGSSRNLSPEHSQLTVHPSFSKSEDVIRQREPYKGLIRSLQKIGCTHVLDLYCQGLT 1988
Query: 974 SWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANFPSG-QNIKSGHFHENLHSCLTAL 1032
S GQFQHD EFT+LQYEAAWR GNWDFSL Y+GAN PS Q+I+ HF+ENLHSCL A
Sbjct: 1989 SQNGQFQHDLEFTELQYEAAWRAGNWDFSLLYMGANSPSSSQHIRCDHFNENLHSCLRAF 2048
Query: 1033 REGDSEEFYRKLKHSKQELVLSVACASEESTEYIYSAIVKLQILCHLGVAWDIRWKSSGE 1092
+EGD EF+ KLK SKQELVLSV AS +STEYIYS I+KLQI HLG+AW +RW E
Sbjct: 2049 QEGDFNEFHSKLKDSKQELVLSVCHASGQSTEYIYSTIIKLQIFYHLGMAWGLRWAPPSE 2108
Query: 1093 SINIYPEKQKIVSEPVIPTVGQLSWLNTEWSSILKRTQLHMNLLEPFMAFRRVLLQILSC 1152
I P QK+ SEP+IPT+ QLSWLNT+WSSILKRTQLHMNLLEPF+AFRRVLLQILS
Sbjct: 2109 KIETSPGMQKVFSEPIIPTMDQLSWLNTDWSSILKRTQLHMNLLEPFIAFRRVLLQILSS 2168
Query: 1153 KDFTMQHLLESASTLRKGFRLSQAAAALHELKCSIFHMIIEQSPLPHLLN------LLRA 1206
KD +QHLL+S+STLRKG R SQAAAALHE K + + + EQ + L LLRA
Sbjct: 2169 KDCMVQHLLQSSSTLRKGSRFSQAAAALHEFKF-LCNRMGEQHSASYWLGRLEEAKLLRA 2227
Query: 1207 QGQHEMAINLAKYISENYESNEEAPDVYRLVGKWLAESRSSNSRIILENYLKPAVSFSED 1266
QGQHEMAINLAKYIS+N + NEEA +VYRLVGKWLAE+RSSNSR ILE YLK AV ++D
Sbjct: 2228 QGQHEMAINLAKYISQNSQLNEEASNVYRLVGKWLAETRSSNSRTILEKYLKRAVLLAKD 2287
Query: 1267 QRTTDKKSIERQCQTHFHLAHYADALFKSYEERLASNEWQAAMRLRKHKTIELEALIKRL 1326
+ TDKK+IERQ QTHFHLAHYADALF+S+EERLASNEWQAA RLRKHKTIELEALIKRL
Sbjct: 2288 NKNTDKKTIERQSQTHFHLAHYADALFRSHEERLASNEWQAATRLRKHKTIELEALIKRL 2347
Query: 1327 KSSTKGEKTDYSIKIQELQKQLAMDREEAQKLLDDRDNFLGLALEGYKRCLVIGDKYDVR 1386
+SS+KGEKTDYS+KIQELQKQLAMD EEA+KL DDRDNFL L LEGYKRCLV+GDKYDVR
Sbjct: 2348 RSSSKGEKTDYSVKIQELQKQLAMDAEEAEKLQDDRDNFLSLTLEGYKRCLVLGDKYDVR 2407
Query: 1387 VVFRLVSLWFSLSSRQNVIKNMVDTIDEVQSYKFIPLVYQIASRMGSTKDALGLHNFQFA 1446
VVFRLVSLWFSLSSRQNVI M+ T+ EVQSYKFIPLVYQIASRMGS+KD LG H+FQFA
Sbjct: 2408 VVFRLVSLWFSLSSRQNVINMMLSTVQEVQSYKFIPLVYQIASRMGSSKDGLGPHSFQFA 2467
Query: 1447 LVSLVKKMAIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELSSYH 1506
LVSLVKKM+IDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLL+ELSS H
Sbjct: 2468 LVSLVKKMSIDHPYHTIFQLLALANGDRIKDKQRSRNSFVVDMDKKLAAENLLKELSSCH 2527
Query: 1507 GAIIRQMKQMVDVYIKLAELETRREDTNKRIQLPREIRCLRQLELVPVVTATVPIDCTCQ 1566
G+II+QMKQMV++YIKLAELET+REDTNKR+ LPREIR LRQLELVPVVT+T P+D CQ
Sbjct: 2528 GSIIQQMKQMVEIYIKLAELETKREDTNKRVMLPREIRSLRQLELVPVVTSTFPVDRNCQ 2587
Query: 1567 YNEGSFPYFKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFG 1626
Y+EGSFP+FKGL +SVM+MNGINAPKVVEC GSDG KYRQLAKSGNDDLRQDAVMEQFF
Sbjct: 2588 YHEGSFPHFKGLGDSVMIMNGINAPKVVECLGSDGQKYRQLAKSGNDDLRQDAVMEQFFS 2647
Query: 1627 LVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRY 1686
LVNTFL NHRDTWKRRL VRTYKVVPFTPSAG+LEWV+GT+PLG+YLIGSTRNGGAHGRY
Sbjct: 2648 LVNTFLENHRDTWKRRLRVRTYKVVPFTPSAGVLEWVNGTLPLGEYLIGSTRNGGAHGRY 2707
Query: 1687 GIGDWSFLKCREHMSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSV 1746
G+ DWSF KCREHM+N KDKR AFQEVC+NFRPV+H FFLERFLQPA WFEKRLAYTRSV
Sbjct: 2708 GMEDWSFSKCREHMTNEKDKRKAFQEVCKNFRPVMHNFFLERFLQPADWFEKRLAYTRSV 2767
Query: 1747 AASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIID 1806
AASSMVGYIVGLGDRH+MNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIID
Sbjct: 2768 AASSMVGYIVGLGDRHSMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIID 2827
Query: 1807 GMGVTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKEMDD 1866
GMGVTGVEGVFRRCCE+TLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKE DD
Sbjct: 2828 GMGVTGVEGVFRRCCEETLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKETDD 2887
Query: 1867 DLETGLEGPEDEYEGNKDAERALIRVKQKLDGYEGGEMRSVHGQVQQLIQDAIDPERFCL 1926
DLET LE E+EYEGNKDA RAL+RVKQKLDGYE GEMRSVHGQV+QLIQDAIDP+RFC
Sbjct: 2888 DLETSLEDLEEEYEGNKDAARALLRVKQKLDGYEEGEMRSVHGQVRQLIQDAIDPDRFCR 2947
Query: 1927 MFPGWGAWL 1935
MFPGWGAWL
Sbjct: 2948 MFPGWGAWL 2956
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297733786|emb|CBI15033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255540663|ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis] gi|223550511|gb|EEF51998.1| ataxia telangiectasia mutated, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356507238|ref|XP_003522376.1| PREDICTED: serine/threonine-protein kinase ATM-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449441017|ref|XP_004138280.1| PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase ATM-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|56748564|sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName: Full=Ataxia telangiectasia mutated homolog; Short=AtATM gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|7529272|emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|240255538|ref|NP_190402.6| serine/threonine-protein kinase [Arabidopsis thaliana] gi|332644858|gb|AEE78379.1| serine/threonine-protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|222617585|gb|EEE53717.1| hypothetical protein OsJ_00056 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
| >gi|218187354|gb|EEC69781.1| hypothetical protein OsI_00057 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1935 | ||||||
| UNIPROTKB|Q5MPF8 | 3061 | atm "Ataxia telangiectasia mut | 0.489 | 0.309 | 0.371 | 2.7e-186 | |
| ZFIN|ZDB-GENE-040809-1 | 2773 | atm "ataxia telangiectasia mut | 0.367 | 0.256 | 0.415 | 3.6e-177 | |
| UNIPROTKB|Q13315 | 3056 | ATM "Serine-protein kinase ATM | 0.487 | 0.308 | 0.370 | 6.8e-177 | |
| UNIPROTKB|E1BEI6 | 3057 | ATM "Uncharacterized protein" | 0.491 | 0.311 | 0.369 | 9.1e-177 | |
| MGI|MGI:107202 | 3066 | Atm "ataxia telangiectasia mut | 0.489 | 0.308 | 0.366 | 2.9e-175 | |
| UNIPROTKB|Q6PQD5 | 3057 | ATM "Serine-protein kinase ATM | 0.487 | 0.308 | 0.357 | 1.4e-174 | |
| RGD|1593265 | 3064 | Atm "ataxia telangiectasia mut | 0.487 | 0.308 | 0.366 | 6.8e-174 | |
| UNIPROTKB|J9JHR5 | 3057 | ATM "Uncharacterized protein" | 0.488 | 0.309 | 0.362 | 8.5e-173 | |
| UNIPROTKB|E1C0Q6 | 3069 | ATM "Uncharacterized protein" | 0.446 | 0.281 | 0.365 | 1.8e-162 | |
| UNIPROTKB|F1PEL7 | 3065 | ATM "Uncharacterized protein" | 0.492 | 0.310 | 0.362 | 3.9e-162 |
| UNIPROTKB|Q5MPF8 atm "Ataxia telangiectasia mutated" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 1545 (548.9 bits), Expect = 2.7e-186, Sum P(6) = 2.7e-186
Identities = 382/1028 (37%), Positives = 578/1028 (56%)
Query: 951 GLMRSLQQVGCMHVLDMYCKGLTSWKGQFQHDPEFTKLQYEAAWRTGNWDFSLPYLGANF 1010
G+M++LQ G H+L Y +GL ++ E ++ ++AAWR WD SLP N
Sbjct: 2071 GIMQALQNFGLCHMLSTYLRGLEHENAEWSS--ELQEIHFQAAWRNMQWDDSLPT--KNE 2126
Query: 1011 PSGQNIKSGHFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEESTEYIYSAI 1070
SG +HE L+ + +LR+ + F+ +K+++ + V + S ES +Y A+
Sbjct: 2127 TSGPG-----YHEFLYRAVQSLRDKEFCGFHDHIKYARVKEVEELCSGSLESVYSLYPAL 2181
Query: 1071 VKLQILCHLGVAWDIRWKSSGESINIYPEKQKIVSEPVIPTVGQLSWLNTEWS--SILKR 1128
+LQ + L + +S + + K + + +L S S++
Sbjct: 2182 CRLQAIGELASVGQMFSRSITDD-GLKDTFLKWQRQSQLLKDSDFEFLEPVLSLRSVILE 2240
Query: 1129 TQLHMNLLEPFMAFRRVLLQILSCKDFTMQHLLESASTLRKGFRLSQAAAALHELK---- 1184
T L +P S KD +HLL+ + R A+ ++K
Sbjct: 2241 TLLQEEKKQPSQE---------SLKDILTKHLLDLSRIARSAGNTQLPEKAMFQIKQYNP 2291
Query: 1185 --CSIFHMIIEQSPL------PHLLNLLRAQGQHEMAINLAKYISENYESNEEAPDVYRL 1236
+ +E++ + P L + Q +++ I + +++ A + RL
Sbjct: 2292 SQLGVSEWQLEEAQIFWDKEEPSLAREILKQMINKLEIKSFEVENDSRLRLLYAESL-RL 2350
Query: 1237 VGKWLAESRSSNSRIILENYLKPAVSFSEDQRTTDKKSIERQCQTHFHLAHYADALFKSY 1296
GKWLAE+ + +I++NYL+ AV F+ +K E + + LA ++DA ++
Sbjct: 2351 CGKWLAETCLESPTVIMQNYLEKAVEFAGYSDGAGEKLQEGRMKAFLSLARFSDAQYQRI 2410
Query: 1297 EERLASNEWQAAMRLRKHKTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLAMDREEAQ 1356
+ + S+E++ L + K E LIK K + Y++K++ ++L +D
Sbjct: 2411 DNYMKSSEFENKQALLR-KAKEEVGLIKHHKV----QNNRYTVKVE---RELQLDECAIL 2462
Query: 1357 KLLDDRDNFLGLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVIKNMVDTIDEVQ 1416
L++DR FL A++ Y CLV G+++D+ + FRL SLW S+ +V M ++
Sbjct: 2463 ALIEDRKRFLCKAVDNYISCLVSGEEHDMWI-FRLCSLWLENSAVSDVNSMMRQDAQKIP 2521
Query: 1417 SYKFIPLVYQIASRMGSTKDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDR-- 1474
S+KF+PL+YQ+A+RMG+ K +G F L +L+ ++++DHP+HT+F +LALAN ++
Sbjct: 2522 SHKFLPLMYQLAARMGTKK--MGNPGFHDVLNNLIGRISMDHPHHTLFIILALANANKDD 2579
Query: 1475 --IKDK--QRSR---NS--FVVDMDKKXXXXXXXXXXS--SYHGAIIRQMKQMVDVYIKL 1523
IK + +RSR N+ + +DK+ + ++R ++++ D YI L
Sbjct: 2580 QLIKAEAVKRSRLTKNAPKQISQLDKERMEAARHIVDTIKKRRTDMVRDVERLCDAYITL 2639
Query: 1524 AELETRREDTNKR-IQLPRE--IRCLRQLELVPVVTATVPIDCTCQY-NEGSFPYFKGLA 1579
A ++ + + + I +P + I L +L V + T + +D + +Y N + FK
Sbjct: 2640 ANMDANQWKSQRNAIPIPSDQPITKLNKLHDVVIPTMEIKVDPSGKYENLVTIVSFK--- 2696
Query: 1580 ESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTW 1639
+ G+N PK+++C GSDG + RQL K G DDLRQDAVM+Q F + NT LR + +T
Sbjct: 2697 PEFRLAGGLNLPKIIDCVGSDGKERRQLVK-GQDDLRQDAVMQQVFQMCNTLLRRNSETR 2755
Query: 1640 KRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREH 1699
KR+L +R YKVVP + +G+LEW GTVP+G+YL+ GAH RY GD+ L+C+
Sbjct: 2756 KRKLTIRRYKVVPLSQRSGVLEWCTGTVPIGEYLVNDKE--GAHKRYRPGDYGSLQCQRK 2813
Query: 1700 MSNVK-----DKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMVGY 1754
M V+ +K F VCENFRPV YF +E+FL PA WFEKRLAYTRSVA SS+VGY
Sbjct: 2814 MMEVQRGRFEEKYQMFLNVCENFRPVFRYFCMEKFLDPAMWFEKRLAYTRSVATSSIVGY 2873
Query: 1755 IVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVE 1814
IVGLGDRH NILID+ +AE+VHIDLGVAFEQG +L TPE VPFRLTRDI+DGMG+TGVE
Sbjct: 2874 IVGLGDRHVQNILIDEESAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGITGVE 2933
Query: 1815 GVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQ-RQKEMDDDLETGLE 1873
GVFRRCCEKT+ VMR N+EALLTIVEV ++DPL+ W ++PLKAL +Q E+D + G +
Sbjct: 2934 GVFRRCCEKTMEVMRNNQEALLTIVEVLLYDPLFDWTMNPLKALYLQQDEVDLNATLGGD 2993
Query: 1874 GPE------DEYEGNKDAERALIRVKQKLDGYEGGEMRSVHGQVQQLIQDAIDPERFCLM 1927
PE D NK AER L+R+++KL G E G + SV GQV LIQ A+DP+ +
Sbjct: 2994 DPECNRNSCDSQSVNKVAERVLLRLQEKLKGVEEGMVLSVGGQVNHLIQQAMDPKNLSSL 3053
Query: 1928 FPGWGAWL 1935
FPGW AW+
Sbjct: 3054 FPGWKAWV 3061
|
|
| ZFIN|ZDB-GENE-040809-1 atm "ataxia telangiectasia mutated" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q13315 ATM "Serine-protein kinase ATM" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BEI6 ATM "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:107202 Atm "ataxia telangiectasia mutated homolog (human)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6PQD5 ATM "Serine-protein kinase ATM" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| RGD|1593265 Atm "ataxia telangiectasia mutated" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9JHR5 ATM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C0Q6 ATM "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PEL7 ATM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.11.1 | 0.824 |
| 3rd Layer | 2.7.11 | 0.766 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1935 | |||
| cd05171 | 279 | cd05171, PIKKc_ATM, Ataxia telangiectasia mutated | 1e-169 | |
| cd00892 | 237 | cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and | 5e-88 | |
| cd05164 | 222 | cd05164, PIKKc, Phosphoinositide 3-kinase-related | 2e-82 | |
| cd05169 | 280 | cd05169, PIKKc_TOR, TOR (Target of rapamycin), cat | 1e-74 | |
| COG5032 | 2105 | COG5032, TEL1, Phosphatidylinositol kinase and pro | 1e-71 | |
| smart00146 | 240 | smart00146, PI3Kc, Phosphoinositide 3-kinase, cata | 4e-67 | |
| cd00142 | 219 | cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI | 1e-59 | |
| pfam00454 | 233 | pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- | 2e-52 | |
| cd05172 | 235 | cd05172, PIKKc_DNA-PK, DNA-dependent protein kinas | 3e-52 | |
| cd05170 | 307 | cd05170, PIKKc_SMG1, Suppressor of morphogenetic e | 1e-45 | |
| cd00896 | 350 | cd00896, PI3Kc_III, Phosphoinositide 3-kinase (PI3 | 6e-13 | |
| cd05167 | 311 | cd05167, PI4Kc_III_alpha, Phosphoinositide 4-kinas | 2e-12 | |
| cd05168 | 293 | cd05168, PI4Kc_III_beta, Phosphoinositide 4-kinase | 2e-12 | |
| cd05170 | 307 | cd05170, PIKKc_SMG1, Suppressor of morphogenetic e | 4e-12 | |
| cd00891 | 352 | cd00891, PI3Kc, Phosphoinositide 3-kinase (PI3K), | 1e-11 | |
| cd00893 | 289 | cd00893, PI4Kc_III, Phosphoinositide 4-kinase (PI4 | 2e-11 | |
| pfam02259 | 350 | pfam02259, FAT, FAT domain | 2e-11 | |
| cd05173 | 362 | cd05173, PI3Kc_IA_beta, Phosphoinositide 3-kinase | 3e-11 | |
| cd05163 | 253 | cd05163, TRRAP, TRansformation/tRanscription domai | 4e-11 | |
| pfam02260 | 33 | pfam02260, FATC, FATC domain | 1e-08 | |
| cd05165 | 366 | cd05165, PI3Kc_I, Phosphoinositide 3-kinase (PI3K) | 2e-08 | |
| cd05174 | 361 | cd05174, PI3Kc_IA_delta, Phosphoinositide 3-kinase | 3e-06 | |
| cd00894 | 365 | cd00894, PI3Kc_IB_gamma, Phosphoinositide 3-kinase | 1e-05 | |
| cd05166 | 353 | cd05166, PI3Kc_II, Phosphoinositide 3-kinase (PI3K | 1e-04 | |
| cd05175 | 366 | cd05175, PI3Kc_IA_alpha, Phosphoinositide 3-kinase | 6e-04 |
| >gnl|CDD|119431 cd05171, PIKKc_ATM, Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
Score = 515 bits (1329), Expect = e-169
Identities = 181/283 (63%), Positives = 221/283 (78%), Gaps = 9/283 (3%)
Query: 1575 FKGLAESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRN 1634
+ GINAPK++ C GSDG KY+QL K G+DD RQDAVMEQ F LVNT L
Sbjct: 1 VSKFKDVFTTAGGINAPKIITCVGSDGKKYKQLLKGGDDD-RQDAVMEQVFQLVNTLLER 59
Query: 1635 HRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFL 1694
+++T KR+L +RTYKVVP +P AGILEWVDGT+PLG+YL+G+T GAH RY GDW+
Sbjct: 60 NKETRKRKLRIRTYKVVPLSPRAGILEWVDGTIPLGEYLVGAT---GAHERYRPGDWTAR 116
Query: 1695 KCREHMSNVK-----DKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAAS 1749
KCR+ M+ V+ ++ F ++C+NFRPV YFFLE+FL P WFE+RLAYTRSVA S
Sbjct: 117 KCRKAMAEVQKESNEERLKVFLKICKNFRPVFRYFFLEKFLDPQDWFERRLAYTRSVATS 176
Query: 1750 SMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMG 1809
S+VGYI+GLGDRHA NILID+ TAEVVHIDLG+AFEQG +L PE VPFRLTRDI+DGMG
Sbjct: 177 SIVGYILGLGDRHANNILIDEKTAEVVHIDLGIAFEQGKILPVPETVPFRLTRDIVDGMG 236
Query: 1810 VTGVEGVFRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWAL 1852
+TGVEGVFRRCCEKTL V+R NK+A+LTI+EV ++DPLY W +
Sbjct: 237 ITGVEGVFRRCCEKTLEVLRDNKDAILTILEVLLYDPLYSWTV 279
|
ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transition. Patients with the human genetic disorder Ataxia telangiectasia (A-T), caused by truncating mutations in ATM, show genome instability, increased cancer risk, immunodeficiency, compromised mobility, and neurodegeneration. A-T displays clinical heterogeneity, which is correlated to the degree of retained ATM activity. Length = 279 |
| >gnl|CDD|119418 cd00892, PIKKc_ATR, ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119424 cd05164, PIKKc, Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119429 cd05169, PIKKc_TOR, TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|227365 COG5032, TEL1, Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >gnl|CDD|214538 smart00146, PI3Kc, Phosphoinositide 3-kinase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|119416 cd00142, PI3Kc_like, Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|189554 pfam00454, PI3_PI4_kinase, Phosphatidylinositol 3- and 4-kinase | Back alignment and domain information |
|---|
| >gnl|CDD|119432 cd05172, PIKKc_DNA-PK, DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119422 cd00896, PI3Kc_III, Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119427 cd05167, PI4Kc_III_alpha, Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119428 cd05168, PI4Kc_III_beta, Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119430 cd05170, PIKKc_SMG1, Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119417 cd00891, PI3Kc, Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119419 cd00893, PI4Kc_III, Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|216950 pfam02259, FAT, FAT domain | Back alignment and domain information |
|---|
| >gnl|CDD|119433 cd05173, PI3Kc_IA_beta, Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119423 cd05163, TRRAP, TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|202180 pfam02260, FATC, FATC domain | Back alignment and domain information |
|---|
| >gnl|CDD|119425 cd05165, PI3Kc_I, Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119434 cd05174, PI3Kc_IA_delta, Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119420 cd00894, PI3Kc_IB_gamma, Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|119426 cd05166, PI3Kc_II, Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >gnl|CDD|88554 cd05175, PI3Kc_IA_alpha, Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1935 | |||
| KOG0892 | 2806 | consensus Protein kinase ATM/Tel1, involved in tel | 100.0 | |
| KOG0890 | 2382 | consensus Protein kinase of the PI-3 kinase family | 100.0 | |
| KOG0891 | 2341 | consensus DNA-dependent protein kinase [Replicatio | 100.0 | |
| COG5032 | 2105 | TEL1 Phosphatidylinositol kinase and protein kinas | 100.0 | |
| KOG0889 | 3550 | consensus Histone acetyltransferase SAGA, TRRAP/TR | 100.0 | |
| cd05171 | 279 | PIKKc_ATM Ataxia telangiectasia mutated (ATM), cat | 100.0 | |
| cd05170 | 307 | PIKKc_SMG1 Suppressor of morphogenetic effect on g | 100.0 | |
| cd05163 | 253 | TRRAP TRansformation/tRanscription domain-Associat | 100.0 | |
| cd05169 | 280 | PIKKc_TOR TOR (Target of rapamycin), catalytic dom | 100.0 | |
| cd05172 | 235 | PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK) | 100.0 | |
| cd00892 | 237 | PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-rela | 100.0 | |
| cd05164 | 222 | PIKKc Phosphoinositide 3-kinase-related protein ki | 100.0 | |
| cd00142 | 219 | PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like f | 100.0 | |
| cd00891 | 352 | PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic | 100.0 | |
| cd00896 | 350 | PI3Kc_III Phosphoinositide 3-kinase (PI3K), class | 100.0 | |
| cd05166 | 353 | PI3Kc_II Phosphoinositide 3-kinase (PI3K), class I | 100.0 | |
| cd05168 | 293 | PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), T | 100.0 | |
| cd05177 | 354 | PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd05165 | 366 | PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, | 100.0 | |
| smart00146 | 202 | PI3Kc Phosphoinositide 3-kinase, catalytic domain. | 100.0 | |
| cd00894 | 365 | PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd00893 | 289 | PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type I | 100.0 | |
| cd05174 | 361 | PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| PF00454 | 235 | PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kina | 100.0 | |
| cd05176 | 353 | PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| cd05173 | 362 | PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), cl | 100.0 | |
| cd05167 | 311 | PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), | 100.0 | |
| cd00895 | 354 | PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), cl | 100.0 | |
| cd05175 | 366 | PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), c | 100.0 | |
| KOG0905 | 1639 | consensus Phosphoinositide 3-kinase [Signal transd | 100.0 | |
| KOG0906 | 843 | consensus Phosphatidylinositol 3-kinase VPS34, inv | 100.0 | |
| KOG0904 | 1076 | consensus Phosphatidylinositol 3-kinase catalytic | 100.0 | |
| PF02259 | 352 | FAT: FAT domain; InterPro: IPR003151 The FAT domai | 100.0 | |
| KOG0902 | 1803 | consensus Phosphatidylinositol 4-kinase [Signal tr | 99.96 | |
| KOG0903 | 847 | consensus Phosphatidylinositol 4-kinase, involved | 99.93 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 99.9 | |
| KOG0892 | 2806 | consensus Protein kinase ATM/Tel1, involved in tel | 99.52 | |
| PF02260 | 33 | FATC: FATC domain; InterPro: IPR003152 The FATC do | 99.24 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 95.16 | |
| smart00145 | 184 | PI3Ka Phosphoinositide 3-kinase family, accessory | 93.85 | |
| cd00870 | 166 | PI3Ka_III Phosphoinositide 3-kinase (PI3K) class I | 92.8 | |
| cd00864 | 152 | PI3Ka Phosphoinositide 3-kinase family, accessory | 92.15 | |
| cd00872 | 171 | PI3Ka_I Phosphoinositide 3-kinase (PI3K) class I, | 91.89 | |
| TIGR02917 | 899 | PEP_TPR_lipo putative PEP-CTERM system TPR-repeat | 88.97 | |
| PF00613 | 184 | PI3Ka: Phosphoinositide 3-kinase family, accessory | 88.22 | |
| PLN03081 | 697 | pentatricopeptide (PPR) repeat-containing protein; | 87.94 | |
| cd00869 | 169 | PI3Ka_II Phosphoinositide 3-kinase (PI3K) class II | 87.61 | |
| PRK15174 | 656 | Vi polysaccharide export protein VexE; Provisional | 86.82 | |
| PRK11788 | 389 | tetratricopeptide repeat protein; Provisional | 86.18 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 84.38 | |
| PLN03218 | 1060 | maturation of RBCL 1; Provisional | 83.95 | |
| PRK10747 | 398 | putative protoheme IX biogenesis protein; Provisio | 82.34 |
| >KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-199 Score=1950.38 Aligned_cols=1730 Identities=30% Similarity=0.386 Sum_probs=1363.1
Q ss_pred HHhhhccccccCCcch-------------HHhHHhhccCeEEEeecccccChhhhhhcCCCCchhHHHHHHHHHHHHhcC
Q 000172 15 RRIGVLFQTWDGHGEL-------------FQDICSNFGVVLVVCSNEKLVTAKEALASGPQSRPKMETIIITLMHLALQS 81 (1935)
Q Consensus 15 ~~~~~lf~~~~~~~~~-------------f~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~l~~la~~~~~s 81 (1935)
.++..+|++-+|..+. |+++|.+++.+|.-.+. ...+.+..++..+++- ..+..++++.-++
T Consensus 883 ~sa~~~~~~~~~~~S~~~f~~~~qil~~~~~~~y~~i~~~l~~msf--~~~~~~~~d~~~l~~~---~~~~~i~~~s~~~ 957 (2806)
T KOG0892|consen 883 HSAIGAYILDVAYGSESIFLKALQILNSDILMNYDSIRSELYDMQF--IGSLQKCVDSNLLFSI---LQSKLIVKISERF 957 (2806)
T ss_pred hhhccchhhhhhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH--hhhcchhHHHHHHHHH---HHHHHhhhhcccc
Confidence 6777788887776665 99999999999988888 6788999999999999 9999999999999
Q ss_pred cchhhHHHHHHHHhhhhcCChHHHHHHHHHHhhhhccccChHHHHHHhHhHHHHHHHhcC---ccchhhHhHHhhhcCCC
Q 000172 82 ESVELEAVFMMCTVSALYPCQRELVNVALDNLSQQLQYTTRWKYLEELLGPILFCWVACG---VSLIALVEIRRLFVSDA 158 (1935)
Q Consensus 82 ~~~e~~~~f~~~~~~~~~~~~~~l~~~vl~~~~~~~~y~~~~~~~~~~l~~l~~~w~~~~---~sl~~~~~~~~l~~~~~ 158 (1935)
+.|++++ |+..|...+..+.+|....+++.+|+.+++. |...+ +. .+||.+ +..| .
T Consensus 958 ~~~r~q~----------------l~~fik~~~~~t~~~~i~~~~s~ssl~~~~l-~~~v~~i~~~-~d~~~~--~~~~-~ 1016 (2806)
T KOG0892|consen 958 GKRRIEN----------------LETFIKFIFDYSPTSWINIKDSYQSLSSAPL-DSDVGVIYNF-DDLYLL--EKKC-D 1016 (2806)
T ss_pred hhHHHHH----------------HHHHHHHHHhcchhhHHhhhhhhhhhhhhhh-hhhcceeecc-cchHHH--hcch-h
Confidence 9999999 8999999999999999999999999999999 98865 33 678777 5556 8
Q ss_pred ChHhHHHHhhhhhhhHHHhcCCccchHHHHHHhCCcHHHHHhhhchhHH-HhhhhccccCCCchHHHHHHHHHhHHhhhh
Q 000172 159 EPCNFVQYCCHWLLPALVLHADTSNLNWMAKIAREPLADLVKNHFVPIF-SISMAWHCSERSDSELGALVLQSSILHLAE 237 (1935)
Q Consensus 159 ~~~~f~~~~~~~l~p~l~~~~~~~~~~~~a~~~~~~~~~l~~~~f~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (1935)
....|++.|.-..+|+.+.+....++..++-..-.+|..+...+|+.+. .+.+++..-... -..|.+.+...
T Consensus 1017 ~~~~~~~~~~~~~i~v~~~~~~~~~~~l~s~~v~~~~~~~~~~~~~~l~k~~~~~~~~~~T~-~~~~l~~e~a~------ 1089 (2806)
T KOG0892|consen 1017 ITIIEAFFLPIPSLKVSKSLYKGFCYLLESCFVFSLINSTRSFLYYQLLKLANSYETENITE-LLDKLHIENAL------ 1089 (2806)
T ss_pred hhHHHhhhcccchhhhhhhhcccceehhhhhhhhhhhhccHHHHHHHHHHhhhHHHHHHHHH-HHHHHHhhhhh------
Confidence 8999999999999999999999999999999999999999999999999 666666543332 22222222222
Q ss_pred ccHHHHHHHHHHhhHHHHHHHHHh-c----------------cc------CCCCCCCccchhhhhhhhhhhhcccccc-c
Q 000172 238 ISEIERDKLIKKHLVSIVSHIISL-A----------------SC------TSDPAVPYFSRDTIVHAVRTVVDGFLEM-Q 293 (1935)
Q Consensus 238 ~~~~~~d~l~~~~~~~iv~~ll~~-~----------------~~------~~~p~pp~f~~~~~~~~i~~~~d~~~~~-~ 293 (1935)
.++.+-.|..+ .|||+|+|+ + |+ ++.|+||+|++++| +||+.|+++| +
T Consensus 1090 --~k~d~i~~~l~--~ivv~L~~lLhe~anS~~s~s~Dic~fsG~~~~el~~~p~p~~F~~~vI----~t~~~~is~~~k 1161 (2806)
T KOG0892|consen 1090 --IKQDLIIYFLN--IIVVALSKLLHEPANSRLSFSTDICSFSGSDFLELDAAPIPPHFPLTVI----ITLFHLITNNHK 1161 (2806)
T ss_pred --HHHHHHHHHHH--HHHHHHHHHhhcccccccccccchHhhcccchhhcCCCCCCcchhHHHH----HHHHHHHhccch
Confidence 23333333333 999999994 2 22 33499999999877 9999999999 8
Q ss_pred CCC-cccceecccccCCchhHHHHHHHHHHHHHHhhhcccchhhhhhHHHHH---------HhcCCcce-ecchhHHHHH
Q 000172 294 DCP-RSAGVVDKINVFRPDRVFMFIVELHYKIAAAVHHRHKCHRLAGVEVLI---------NVLGHRAA-VSSASNYLFN 362 (1935)
Q Consensus 294 ~~~-~~~~~~~k~~~~~pd~i~~~Ll~~~~~~~~~~~~~~~~h~l~~~~~l~---------~~lg~~~~-~~~~~~y~~~ 362 (1935)
++. +...+++| +||+.|+++|+||...+++ .+.||+||+..+|+++ +||||.|+ |.+ ||
T Consensus 1162 ~~Lqs~~eils~----S~~s~~~ieL~i~~l~~~s-n~v~~k~ri~~l~~ll~~ll~~~i~Sgl~~ags~v~~-----I~ 1231 (2806)
T KOG0892|consen 1162 TKLQSYLEILSV----SPDSYQKIELIIDILAAES-NNLHKKHRIKYLYHLLASLLCKDILSGLSELGSTVLS-----IY 1231 (2806)
T ss_pred HHHHHHHHHccc----CCcchhhHHHHHHHHHHHh-cccchHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHH-----HH
Confidence 887 55599999 8999999999999999999 5999999999999843 89999888 777 45
Q ss_pred hhhhhccccC---------hhhhHHHHHHHHHhh-hcCCCchhhhhhhhccccceeeccccccccCCCCCCcccchhhHH
Q 000172 363 LVGQFIGVYA---------LQDQCCRIVSALLKA-FRDNPSKEIVNVLGEQLQFLVSKLVACCIPSEANEPSVSRSSQVL 432 (1935)
Q Consensus 363 ~l~~~i~~~~---------l~~~Cc~ll~~~~~~-~~~~~~~~~~~~l~~~L~~iv~~lv~~~~~~~~~~~~~~~~~~~~ 432 (1935)
+++|||+.++ +.+.||++.+.||++ +.+ |.+.++.|.++++++++... .+...|.+
T Consensus 1232 ~l~hyI~p~l~~~mDvs~~s~t~~~~i~~~V~qt~v~y-----~~~~~~N~~~~~~~~~~~~~---------~~l~~~~l 1297 (2806)
T KOG0892|consen 1232 FLSHYINPRLTIFMDVSIMSFTNSCDIPSFVLQTVVWY-----CGRLFENLEHFSSIPFSSVV---------IDLVKQRL 1297 (2806)
T ss_pred hhHHhcCcccccccchhhhhccccccHHHHHHHHHHHH-----HHHHHhhhhhhhhccchhhe---------ehhhhhhH
Confidence 9999999875 358899999999999 767 99999999999999963333 24788889
Q ss_pred hhhhHhhcCC--CccHHHHhhhcCCCCCChhhHhHHHHHHHhh---ccCChHHHHHHHhhhccCCcc-------ccccc-
Q 000172 433 SLLLQLTVDS--DPSLHDYIRELEPFPEIDIFDGIRSFHEELC---QAYSARDHLLKFVQRACNLPS-------RLLPW- 499 (1935)
Q Consensus 433 ~lL~~lvv~~--~~~L~~~i~~L~pfPd~~~fk~~r~~~~~~~---~~~sl~~ei~~fl~~~~~l~~-------~l~~~- 499 (1935)
-...+.++|+ ++.+...|..+.| |+++.|+.++.+.+.+| +.++..+|+++||+.+..-+. .+.++
T Consensus 1298 ~~~~~~~~d~~kn~~i~~~~~lf~~-~~~~~~~~~~~~~~~~~~tr~~~s~l~~~~~lL~~~~~~~~~~~~~~~~f~~l~ 1376 (2806)
T KOG0892|consen 1298 AIGKLFATDEEKNETISFRICLFLP-FSDTFIFSNYRLMIHLRITRQHLSALTELSLLLGIARFHLKKLKPSFTDFDKLF 1376 (2806)
T ss_pred HHHHHHhhhhhhcchhhhhhhhccC-chhHHHHHHHHHHHHHHhcccchHHHHHHHHHhhhhhccccccCcccchHHHHH
Confidence 9999999997 5889999999999 99999999999999998 588999999999998766221 23333
Q ss_pred ----------------ccccCCCCchhHH-HHHHHHHhhcCCCCCcceeecCCCccccccc---cc-c---cc-------
Q 000172 500 ----------------RWFVTPNDASSIR-AWVSDFISRVGIGDPHCVVFHLPRDSIYMHA---CR-P---IN------- 548 (1935)
Q Consensus 500 ----------------~~~~~~~~~~~~~-~lv~~ll~~~~~~~~h~~~f~~~~~~~~~~~---cl-~---~~------- 548 (1935)
.+...+.++++.. ++++.|++..+... ...+.+++-++ |+ + |+
T Consensus 1377 ~l~~~c~~~~~~~~~~~~a~~~~~~~~~~~~~~vNLl~~~~~~~------~~~~~k~i~e~~~s~~~~~~~v~vs~~~~~ 1450 (2806)
T KOG0892|consen 1377 SLARQCCDFKGFCYDTIKAMEDIQDFGTWKKGYVNLLLNFEYEG------DGFLREQIRELRSSMTGKNDWVDVSNKLRE 1450 (2806)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHhhhcc------cchHHhHHhhhhccccCCcchhhhhhHHHH
Confidence 1224566777777 68889988877664 55555665554 33 2 22
Q ss_pred CCC--CCccccccccccccchHHHHHHHHHHHHhhccCCccccchHHHHHHHHhcc-cccCchhcchhhhhhHHHHHhhc
Q 000172 549 HGS--GSATEFNFHLDAGISEELLIAVLKILKKYLMDDSVQIVDMTSQTLRGILST-EKGQRAVMSFDSYERSLLEVHSK 625 (1935)
Q Consensus 549 ~~~--~~~~~~~~~~~~~~~~~~~~~iL~~L~~~L~~~~~~~~~~a~~~L~~ils~-~~g~~~~~~~~~~~~~~~~~~~~ 625 (1935)
++. ++..+.++..++.+ ++.+.++.+++++|...+.+++..+-+++.+++.+ ..+..+| +.+..
T Consensus 1451 ~~~~~~~~~~lkl~~~~~L--~~~~~~~~~~~n~l~~~c~k~~~~~~~~~~n~~~s~~t~~~~~-----------q~~~e 1517 (2806)
T KOG0892|consen 1451 RSARISMNNLLKLYFWTVL--DAHFRKVLHSLNLLFWKCYKARSRELQDLHNKLFSTDTMGWFW-----------QKSPE 1517 (2806)
T ss_pred HhccccCCcHHHHHHHHHH--HHHHHHHHHHHhHHHHhhHHHHHHHHHHHHHHHHhhhhhhhHH-----------hcCcc
Confidence 221 35566666655555 66788999999999999999999999999999877 6677664 33333
Q ss_pred CCcHHHHHHhhhhhhhhhh-h--hhc-ccccCCCCCCCCcccccCC----CChhhhHHHHHHHhh--ccCCchhhHhhHH
Q 000172 626 GVNVELVETFLLDLERKFK-V--FWV-SLSANGISPEKSTVWETDG----KTFETWICPLTYSLI--GCCNDVVLRLCQD 695 (1935)
Q Consensus 626 ~~~~~l~~~~~~~~~~~~~-~--~~~-~~~~~~~~~~~~~~W~~~~----~s~~eWir~Ls~~Ll--~~s~s~~Lr~c~~ 695 (1935)
.+++.. ++..++++... . .+. .........++-.+|.... .+++.|++.+...-. .+..+.++.+..+
T Consensus 1518 ~v~~~~--~~~q~~~~~~~~~~~e~~~~~~~~v~~~~~~~L~~~~~~~~~~s~g~~i~~~~~~~n~~~~~K~~i~~~dk~ 1595 (2806)
T KOG0892|consen 1518 IVDLVH--YYPQTDPRLCDTSNYEPSKDFLWKVICQDDCSLLFKLPILLDSSIGIQIRMFFEGSNIMELTKNLIFPLDKI 1595 (2806)
T ss_pred ceechh--hcccCChhhhhhcccCchhhhhhchhccccceEEEEcCcccccchhhhhhhccccchhhhhhhhhccchhHH
Confidence 444443 33333331111 0 000 1222334567888898877 779999998887654 4677889999999
Q ss_pred HHhccHHHHHHHhHHHHHHHhcCCCcchhHHHHHHHHHHHhhhhcch-------------hhHHHHHHHHHHHHHHHHHH
Q 000172 696 IVLLKSEVAELLLPSVVVNLAGSKNVDVDLQKLISSQVQKYIFTESN-------------KLIKSIQVFLNALNELRLCH 762 (1935)
Q Consensus 696 L~~~~~~~Ae~LfP~~~~~~~~e~d~~~~~~~~Ls~~~~~~~~~~s~-------------~~~~~iq~~l~~~~~lR~~~ 762 (1935)
++....+++....|+.+++++.+ +.++.+.+.++...+.-+..+.. ......+.+..+|..
T Consensus 1596 ~~~~~~~~~~~~~~~~~~~il~~-t~~es~s~w~s~~~ls~f~~c~~~~~~~~~st~~~~~~t~i~~~i~~~l~~----- 1669 (2806)
T KOG0892|consen 1596 TLDSFLKTLVSEEGSFIIDILQQ-TNNESLSNWLSEFALKLFNMCGRSSTTHSLSTYMANFSTSICQLIICLLLL----- 1669 (2806)
T ss_pred HHHHHHHHHhhccchhHHHHHhh-hhccchhhHHHHHHHHHHHHHhccCCchhhccccccccHHHHHHHHHHHHh-----
Confidence 99999999999999999998755 35666666666654442211110 011122222222110
Q ss_pred HhhccCCCCCCccccccccccCccccchhh-ccccccccccccccccccCHHHHHHHHHHhcchHHHhhhhHhhhhhhh-
Q 000172 763 VMERSSSVPPKRETIGVMQFNGRYSKDVVA-TSNATMTTSWDKVYWLSVDYLRVAKSAVICGSYFTSVMYVEHWCEEHY- 840 (1935)
Q Consensus 763 ~~e~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~wL~Id~~~lA~aA~~C~AyatALly~E~~~~e~~- 840 (1935)
+. +.|.+ +....++-.+ .-+++..+..+..+|+++++..+++.+++|+++..+..|.|+...+..
T Consensus 1670 --~s--~~~~~---------~~~~~~~yi~~~~~~sl~~n~~~~~~m~~ni~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 1736 (2806)
T KOG0892|consen 1670 --ES--DFNPG---------NNLKQKDYIFELILSSLLKNSNSIFKMDMNILKYLRRQLGCHAFNPFEIYYWLPIVYSVA 1736 (2806)
T ss_pred --hc--cccHH---------HHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhchhhhcchhhhccccHHHHHH
Confidence 00 10100 0000011000 012333344455689999999999999999999999999999876541
Q ss_pred ----------ccc----cCCCCC-CCccCCcchHHHHHHHHHhhCCCchhhhhhhhccchh-hHHHHHHhhCCHHHHHHH
Q 000172 841 ----------KSL----TLGSPD-FSHLETLPRHIEILVSAVTQINEPDSLYGIIQSHKLS-SQIVTLEHEGNWSKALEY 904 (1935)
Q Consensus 841 ----------~~~----~~~~~~-~s~~~~~~~~~e~L~~IY~~IdEPDa~yGI~~~~~l~-~~i~~yE~eg~W~kAL~~ 904 (1935)
+.. +..+++ .++.+.....+|+|.++|+.|++||++||+.....++ .++..|||+++|.+||..
T Consensus 1737 ~~~~~~~~~~e~s~~~~t~~~~k~k~~e~~~~~lqDil~~~y~~I~~pD~lyG~~~~~~~~~~~l~~~~he~~w~~aL~~ 1816 (2806)
T KOG0892|consen 1737 ASTAYDCLLFEYSLLSLTIHSPKNKRDELDITLLQDILKKAYESINCPDALYGIKRPTSLKNLILITAEHEKNWPRALSY 1816 (2806)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccchhHHHHHHHHHHHHHHHhhCCCcchhcccCCcccccccccchhhhhhhHHHHHHh
Confidence 000 001111 1112223345677777799999999999999877777 689999999999999999
Q ss_pred HHHHHhhhhhcccCCCCCCCCCCCCCCcCCCCCcchhhhhhccchhHHHHHHHhhchhhHHHHHhhhcccccCCCCCCch
Q 000172 905 YELQVRSDVMLQMDGNSGALSPHGLPSVHLSPSTSENEMMQRKPYKGLMRSLQQVGCMHVLDMYCKGLTSWKGQFQHDPE 984 (1935)
Q Consensus 905 Yd~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~e~~~~~~~~~~GlmrcL~~LG~~~~L~~y~~gL~~s~~~~~~~~~ 984 (1935)
||..-. .|+ ..+..|.+++|++.|+.|++..|++|++... ..+.++
T Consensus 1817 ~d~~~~------------------~~s--------------s~~~~~~~~sLq~~g~~~I~~~y~~Gl~~~~--~~~~~~ 1862 (2806)
T KOG0892|consen 1817 YDLADM------------------YPS--------------SEDEAGFINSLQNAGFFHILEFYIDGLKSND--KIDEPS 1862 (2806)
T ss_pred hcchhh------------------ccc--------------hHhHhHHHHHHHHhcchhHHHHHhcChhhhh--hhhhhh
Confidence 998742 333 1235899999999999999999999998876 566778
Q ss_pred hhHHHHHHHhcCCCCCCCccccCCCCCCCCCccccchhhhhHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhchhhHH
Q 000172 985 FTKLQYEAAWRTGNWDFSLPYLGANFPSGQNIKSGHFHENLHSCLTALREGDSEEFYRKLKHSKQELVLSVACASEESTE 1064 (1935)
Q Consensus 985 ~~~l~~eAAWrLgqWD~~~~~~~~~~~~~~~~~~~~f~~~L~~aLlAl~~~d~~~f~~~i~~aR~~l~~eLsa~s~ES~~ 1064 (1935)
..+..|++|||+|+||...+++-. .....+..||..+|.+++|+++++++++..+++.+|+..+..++..+.|+..
T Consensus 1863 ~~e~~Ye~awr~g~Wd~~t~~~~~----~~~~~~~~y~e~~f~~l~al~ere~e~~yl~le~a~~~~v~~i~~~see~~~ 1938 (2806)
T KOG0892|consen 1863 NEELVYEAAWRLGKWDILTLSLVD----QNKTKGDYYHESLFEALRALHEREIEGSYLHLEDARNKKVLLINPNSEESSL 1938 (2806)
T ss_pred hhhhhHHHHHhcCCcccCCcchhh----hhhhhchhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcccchHHHH
Confidence 888999999999999976543211 1456678899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHhhhhccCcccccccccccccCCCCCccchhhhHHHHHHHHHHHhhhcchhhhhhHHHHHH
Q 000172 1065 YIYSAIVKLQILCHLGVAWDIRWKSSGESINIYPEKQKIVSEPVIPTVGQLSWLNTEWSSILKRTQLHMNLLEPFMAFRR 1144 (1935)
Q Consensus 1065 r~Y~~lvrLq~L~ELEei~ei~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~W~~rl~~~q~~~e~~epiL~~R~ 1144 (1935)
..|+.+.+||.+.+||.+.++.+++.. ......+...|+.-++.....++..+-....+.
T Consensus 1939 ~~y~~l~~L~~l~~l~~i~~l~~~~~~--------------------~~~~~~~~~k~~t~~q~~~~~~~~~~~~~~d~n 1998 (2806)
T KOG0892|consen 1939 SFYATLYDLQFLVTLEPIRCLQSTADK--------------------HQSNTDILQKWKTNLQLSSQLMECLSLLIEDRN 1998 (2806)
T ss_pred HHHHHHHHHHHHhhhhhhHhhhhhhcc--------------------hhhhhHHHHHHHHHHhhccchHHHHHHHHHHHH
Confidence 999999999999999999998773210 111233445555555544444444443333333
Q ss_pred HHHHhccch--------hHH----HHHHHHHHHHHHhcCChHHHHH-------HHHHhhhccccccccCCCchHHHHHHH
Q 000172 1145 VLLQILSCK--------DFT----MQHLLESASTLRKGFRLSQAAA-------ALHELKCSIFHMIIEQSPLPHLLNLLR 1205 (1935)
Q Consensus 1145 ~vl~il~~~--------e~~----~~~wl~~A~laRKag~~~~A~~-------aL~~l~~l~~~~~i~q~~l~~~Ak~LW 1205 (1935)
.++.....+ +.. .-+.+....++|+....+.-.+ ...+.+.+.. -+.|+..|
T Consensus 1999 ~l~s~~~l~~~l~~~~~~~~~~~l~~~g~e~~~la~~~~~~~~~~~~~r~~~~i~~~~~~~~~---------~s~aq~~~ 2069 (2806)
T KOG0892|consen 1999 VLLSLLQLHKQLSESQLADLASLLKYYGLELCKLAESFLIADLLQNIARAFPVIMLSIKLLCK---------FSLAQENL 2069 (2806)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhchhhHHhHHHhhHHHHHHHHHHhh---------hhhhhhhc
Confidence 332221111 110 1111222333333333222222 1222221110 00233333
Q ss_pred HCCCh-------------HHHHHHHHHHH-hhccCCCchhHHHHHHhHhHHHhhcCChHHHHHhhhchhcccccccccch
Q 000172 1206 AQGQH-------------EMAINLAKYIS-ENYESNEEAPDVYRLVGKWLAESRSSNSRIILENYLKPAVSFSEDQRTTD 1271 (1935)
Q Consensus 1206 ~~Ge~-------------~~Ai~~Lq~l~-~~~~~~~~~a~ll~llG~wlaet~~e~~~~I~~~Y~~~Av~~~e~~~~~~ 1271 (1935)
+++.. .+++-.+.... ++........+.++.+|+|++|++++++..|+++|+++|+..++......
T Consensus 2070 k~~~~~~~e~iL~~~~~kne~~~~~s~~~~~~~~lk~~~~~~~a~~g~Wlaetk~ens~~i~e~yl~~a~~~ae~~d~e~ 2149 (2806)
T KOG0892|consen 2070 KHDIDKLSEAILWQRDEKNEAIISLSESLAKNNSLKEFPSDIYAVLGKWLAETKSENSALISEKYLEKAVSLAEHYDNES 2149 (2806)
T ss_pred cchhhhhHHHHHHHHHhhhhHHHHHHhhhhhcchhhhhHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHHhhhcchhH
Confidence 33322 22222222112 22222244578999999999999999999999999999998877662222
Q ss_pred -hhhHHHHhhhhhhHHHHHHHHHhhHHHHhccHHHHHHHHHHhhhHHHHHHHHHHhhhcccCccchhhHHHHHHHHHHhh
Q 000172 1272 -KKSIERQCQTHFHLAHYADALFKSYEERLASNEWQAAMRLRKHKTIELEALIKRLKSSTKGEKTDYSIKIQELQKQLAM 1350 (1935)
Q Consensus 1272 -~~~~~~~~~~~~~lA~f~D~~~q~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~~at~~~~~~y~~~~~~l~~~~~l 1350 (1935)
+........+++++|+|.|.+|+.+++|+++.+|+.++++++.+.++++.+.++.... + +.+..+.++++.+
T Consensus 2150 ~~~~~~~~s~a~~~~akysd~~~~~~~~~~~sse~et~~~l~k~~~~~~~~~~er~~q~----~---~~~~~~~~rq~~l 2222 (2806)
T KOG0892|consen 2150 CKALIYCQSFAQFCLAKYSDPDYQEDEERRSSSEFETLKDLQKLERSTVEASNEREEQM----R---KNHHVRVQRQLIL 2222 (2806)
T ss_pred HHHHHhHHHHHHHHHHhccCchhhhHHHHHhHHHHhhHHHHHHHHHhhhhhhHHHHHHH----H---HHHHHHHHHHHhc
Confidence 2233345789999999999999999999999999999999999999988765443221 1 1344567899999
Q ss_pred cHHHHHHhHHhHHHHHHHHHHHHHHHhccCCCcchHHHHHHHHHHHhcCccHHHHHHHHHhhhcccccchhhhhHHHHhh
Q 000172 1351 DREEAQKLLDDRDNFLGLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVIKNMVDTIDEVQSYKFIPLVYQIASR 1430 (1935)
Q Consensus 1351 D~~e~~~l~~~r~~fl~~Al~~Yl~sL~~s~~~~~~~i~RllsLWl~~~~~~~v~~~~~~~~~~vp~~kfl~~lpQL~sr 1430 (1935)
|++++++++.+|++||..|++||++|+..|++|+.+.++|+|+|||++++..++++.|.+.+.+||+|||+||++||+||
T Consensus 2223 De~~l~~l~~~r~~fL~~Alt~Yl~cl~~~~~~D~~~i~R~cslWfsns~~~evn~~mk~~i~~ipsyKFip~~yQlAaR 2302 (2806)
T KOG0892|consen 2223 DEEELLALSEDRSKFLTLALTNYLNCLSESDEYDVDLIFRCCSLWFSNSHLKEVNNSLKHEIQTVPSYKFIPLVYQLAAR 2302 (2806)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhHHHHHhhcccccHHHHHHHhhhhccccchHHHHHHHHHHhccCCcchhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccccccHHHHHHHHHHHHHHhCCchhHHHHHHhccccc-hhhhhccccchhhhhhHHHHHHHHHHHHHhhHHHH
Q 000172 1431 MGSTKDALGLHNFQFALVSLVKKMAIDHPYHTIFQLLALANGDR-IKDKQRSRNSFVVDMDKKLAAENLLEELSSYHGAI 1509 (1935)
Q Consensus 1431 L~~~~~~~~~~~f~~~L~~Ll~ri~~~hP~~~ly~L~a~~~s~~-~~~~~r~~~~~~v~~~r~~aa~~il~~l~~~~~~~ 1509 (1935)
|+. .++..||+.|..|+.+++++||||++|+|+++.+..+ .++..++|.+ ++.+|..+|+.++.......+.+
T Consensus 2303 l~~----~~~~~fq~~L~~Li~r~~~dhPyhtly~L~~L~~~~rd~e~~n~sr~s--l~~~rki~a~l~~~~v~~~~~~~ 2376 (2806)
T KOG0892|consen 2303 LGN----SENNSFQKSLTSLIYRVGRDHPYHTLYQLLSLVNAVRDNEDENRSRGS--IDRDRKIAAELDLCDVNQGAGNM 2376 (2806)
T ss_pred hcc----ccCchHHHHHHHHHHHHhccCchHHHHHHHHHHhcCcChhhhhhcccc--cchhHHHHHHHhhhHhhccchhH
Confidence 993 2457899999999999999999999999999998776 5666777765 78899999999999988899999
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccccc-ccchhhhhh--ccccccccccccccCCCCCCcccCCCccccccccceEEEec
Q 000172 1510 IRQMKQMVDVYIKLAELETRREDTNKR-IQLPREIRC--LRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLAESVMVMN 1586 (1935)
Q Consensus 1510 ~~~~~~l~~~~~~La~~~~~~e~~~~~-~~~~~~l~~--l~~l~~vp~~t~~lpi~~~~~y~~g~~~~I~~f~~~~~v~~ 1586 (1935)
+++++.+|++|+.||+.++...++..+ +.+|..... ..+++.+|+||+.+++++++.| |..|+|++|.++|.+++
T Consensus 2377 v~~v~~lc~~yI~lAnl~~~q~~t~~k~v~~p~~~~~~K~~nl~~v~~pT~ev~v~~s~~~--~~~p~i~s~~~~v~~~~ 2454 (2806)
T KOG0892|consen 2377 VRQLECLCEAYISLANLKTSQNDTTSKLVRLPGYQWFLKQLNLEGVPPPTMNVKVNDSGDY--GNIPTVVSFDDTVTFAG 2454 (2806)
T ss_pred HHHHHHHHHHHHHHhcCcccccchhhhhhcCccccHHHhhhhccCCCCCCCCccccCCccc--CCCceEEecccceeeec
Confidence 999999999999999987766666555 556655443 3456678888998888887755 56899999999999999
Q ss_pred CCCcceEEEEEecCCcEEEeeeecCCCcchhhHHHHHHHHHHHHHHHcCcccccCCeeeecceEEEcCCCCceeeecCCC
Q 000172 1587 GINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGT 1666 (1935)
Q Consensus 1587 s~~~Pk~i~~~gsdGk~y~~L~K~G~dDlRqD~r~~Qlf~lvN~lL~~~~et~rR~L~i~tY~ViPLs~~~GLIE~v~~t 1666 (1935)
|++.||+|+|.||||++|++|+|+|+||||||++|+|+|+++|++|.++++|++|+|.||||+||||+|++|+||||.||
T Consensus 2455 GinaPkiI~c~gSDG~~~kqLVK~gnDDLRQDAVMeQvF~~vN~lL~~~~et~krkL~irTYKVvPls~~sGvlEwv~~t 2534 (2806)
T KOG0892|consen 2455 GINAPKVITCVGSDGKTYKQLVKGGNDDLRQDAVMEQVFGQVNTFLQNDRETRKRKLSIRTYKVIPLSPKAGVLEWVTNT 2534 (2806)
T ss_pred CccCCeEEEEEccCchhHHHHHhcccchHHHHHHHHHHHHHHHHHhhccHHHHhcccceeEEeeeecCcccceeecccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHhhhhccCCCCCCCCCCCCchhhHhhhhhcchh-----hHHHHHHHHHhhhhhhHHHHHHHhccCChHHHHHHHH
Q 000172 1667 VPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVK-----DKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLA 1741 (1935)
Q Consensus 1667 ~tL~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~k~~~f~~i~~~~~pvl~~~f~~~f~~p~~w~~~R~~ 1741 (1935)
+|+++|+.... +|+|+||+|++|++.+||+.|+..+ +|+++|.+||.+|.||||+||+|+||+|.+||++|++
T Consensus 2535 iplgeyLv~~~--~gah~ry~p~d~s~~~crk~m~~~q~k~~E~r~k~y~~vc~n~~PvfryFflEkF~dP~~WFekrla 2612 (2806)
T KOG0892|consen 2535 IPLGEYLVVES--GGAHKRYRPNDWSLSKCRKLMSEVQKKSLETRLKAYDKVCRNIRPVFRYFFLEKFPDPADWFEKRLA 2612 (2806)
T ss_pred eehhhhhcccC--CccccccCCCCCChHHHHHHHHHHhcccHHHHHHHHHHHHhhchHHHHHHHHHhcCCHHHHHHHHHH
Confidence 99999998644 8999999999999999999998876 7899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCeEEEecCCCcEEEeecchhhccccCCCCCCCCCccccHHHHhhccccccchhhHHHH
Q 000172 1742 YTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGVFRRCC 1821 (1935)
Q Consensus 1742 FtrS~A~~S~vgYILGLGDRH~~NILid~~TG~vvHIDfg~~F~~g~~l~~pE~VPFRLTrniv~~mG~~GveG~Fr~~~ 1821 (1935)
||||+|+.|||||||||||||.+|||||..||+|||||||++||+|+.+|+||+||||||||||||||++||||+||+||
T Consensus 2613 YTrsvA~sS~VGyILGLGDRH~qNILid~~taEviHIDlGiAFEQGkilptPE~VPFRLTRDiVdgmGItGveGvFrRcc 2692 (2806)
T KOG0892|consen 2613 YTRSVAASSMVGYILGLGDRHGQNILIDQQTAEVIHIDLGIAFEQGKILPTPETVPFRLTRDIVDGMGITGVEGVFRRCC 2692 (2806)
T ss_pred HHHhHHHHHHHHHHhcccchhhhheeecccccceEEEeeeeehhcCCcCCCCCcccceeehhhccccCccCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcChHHHHHHHHHHccCCCcccccChhHHHhhhhccccccccCCCCCcccccc-chhHHHHHHHHHhhhcCCC
Q 000172 1822 EKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKEMDDDLETGLEGPEDEYEG-NKDAERALIRVKQKLDGYE 1900 (1935)
Q Consensus 1822 ~~t~~~LR~~~~~l~~iL~~fl~DPL~~W~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~-n~~a~~~l~rv~~KL~g~~ 1900 (1935)
|.||.+||++++.+++|||+|+||||++|.++|.|+.++|++.+ ..+.+.++....... +..|.|++.|+++||.|++
T Consensus 2693 E~t~~vlR~~~~~lltileVl~yDPLf~W~msplK~~~~q~~e~-~e~~n~~~~~~~~~~nd~~a~r~l~r~q~kl~g~e 2771 (2806)
T KOG0892|consen 2693 EFTLEVLRREKESLLTILEVLLYDPLFSWLMSPLKALKKQKEED-EENFNLSGNITEDASNDRNAVRALMRAQRKLDGVE 2771 (2806)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhcchHHHhhcHHHHHHHHHhhc-chhcccccchhhhhccchHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999988632 222222222222222 5778999999999999999
Q ss_pred CCCccCHHHHHHHHHHHhcCchhhhhhCcccccCC
Q 000172 1901 GGEMRSVHGQVQQLIQDAIDPERFCLMFPGWGAWL 1935 (1935)
Q Consensus 1901 ~~~~lsV~~qV~~LI~~Atd~~NLa~m~~gW~Pwl 1935 (1935)
.|..+||++||+.||||||||+|||+|||||.||+
T Consensus 2772 ~g~~~sVe~qv~~LIqqA~dpsnLs~~fpGW~a~~ 2806 (2806)
T KOG0892|consen 2772 QGTMLSVEAQVQELIQQATDPSNLSLMFPGWSAFQ 2806 (2806)
T ss_pred ccccccHHHHHHHHHHHhcCchhhhhhcCCCcCcC
Confidence 99999999999999999999999999999999996
|
|
| >KOG0890 consensus Protein kinase of the PI-3 kinase family involved in mitotic growth, DNA repair and meiotic recombination [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0891 consensus DNA-dependent protein kinase [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG5032 TEL1 Phosphatidylinositol kinase and protein kinases of the PI-3 kinase family [Signal transduction mechanisms / Cell division and chromosome partitioning / Chromatin structure and dynamics / DNA replication, recombination, and repair / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0889 consensus Histone acetyltransferase SAGA, TRRAP/TRA1 component, PI-3 kinase superfamily [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00891 PI3Kc Phosphoinositide 3-kinase (PI3K), catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00896 PI3Kc_III Phosphoinositide 3-kinase (PI3K), class III, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05166 PI3Kc_II Phosphoinositide 3-kinase (PI3K), class II, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05168 PI4Kc_III_beta Phosphoinositide 4-kinase (PI4K), Type III, beta isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05177 PI3Kc_C2_gamma Phosphoinositide 3-kinase (PI3K), class II, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05165 PI3Kc_I Phosphoinositide 3-kinase (PI3K), class I, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain | Back alignment and domain information |
|---|
| >cd00894 PI3Kc_IB_gamma Phosphoinositide 3-kinase (PI3K), class IB, gamma isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00893 PI4Kc_III Phosphoinositide 4-kinase (PI4K), Type III, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05174 PI3Kc_IA_delta Phosphoinositide 3-kinase (PI3K), class IA, delta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >PF00454 PI3_PI4_kinase: Phosphatidylinositol 3- and 4-kinase; InterPro: IPR000403 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >cd05176 PI3Kc_C2_alpha Phosphoinositide 3-kinase (PI3K), class II, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05173 PI3Kc_IA_beta Phosphoinositide 3-kinase (PI3K), class IA, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05167 PI4Kc_III_alpha Phosphoinositide 4-kinase (PI4K), Type III, alpha isoform, catalytic domain; The PI4K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd00895 PI3Kc_C2_beta Phosphoinositide 3-kinase (PI3K), class II, beta isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >cd05175 PI3Kc_IA_alpha Phosphoinositide 3-kinase (PI3K), class IA, alpha isoform, catalytic domain; The PI3K catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases | Back alignment and domain information |
|---|
| >KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF02259 FAT: FAT domain; InterPro: IPR003151 The FAT domain is a domain present in the PIK-related kinases | Back alignment and domain information |
|---|
| >KOG0902 consensus Phosphatidylinositol 4-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0903 consensus Phosphatidylinositol 4-kinase, involved in intracellular trafficking and secretion [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >KOG0892 consensus Protein kinase ATM/Tel1, involved in telomere length regulation and DNA repair [Signal transduction mechanisms; Chromatin structure and dynamics; Replication, recombination and repair; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF02260 FATC: FATC domain; InterPro: IPR003152 The FATC domain is found at the C-terminal end of the PIK-related kinases | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >smart00145 PI3Ka Phosphoinositide 3-kinase family, accessory domain (PIK domain) | Back alignment and domain information |
|---|
| >cd00870 PI3Ka_III Phosphoinositide 3-kinase (PI3K) class III, accessory domain (PIK domain); PIK domain is conserved in all PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >cd00864 PI3Ka Phosphoinositide 3-kinase family, accessory domain (PIK domain); PIK domain is conserved in PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >cd00872 PI3Ka_I Phosphoinositide 3-kinase (PI3K) class I, accessory domain ; PIK domain is conserved in all PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein | Back alignment and domain information |
|---|
| >PF00613 PI3Ka: Phosphoinositide 3-kinase family, accessory domain (PIK domain); InterPro: IPR001263 Phosphatidylinositol 3-kinase (PI3-kinase) (2 | Back alignment and domain information |
|---|
| >PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional | Back alignment and domain information |
|---|
| >cd00869 PI3Ka_II Phosphoinositide 3-kinase (PI3K) class II, accessory domain (PIK domain); PIK domain is conserved in all PI3 and PI4-kinases | Back alignment and domain information |
|---|
| >PRK15174 Vi polysaccharide export protein VexE; Provisional | Back alignment and domain information |
|---|
| >PRK11788 tetratricopeptide repeat protein; Provisional | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >PLN03218 maturation of RBCL 1; Provisional | Back alignment and domain information |
|---|
| >PRK10747 putative protoheme IX biogenesis protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1935 | ||||
| 2y3a_A | 1092 | Crystal Structure Of P110beta In Complex With Icsh2 | 1e-10 | ||
| 2x6f_A | 696 | The Crystal Structure Of The Drosophila Class Iii P | 1e-08 | ||
| 3ihy_A | 600 | Human Pik3c3 Crystal Structure Length = 600 | 4e-08 | ||
| 3ls8_A | 614 | Crystal Structure Of Human Pik3c3 In Complex With 3 | 4e-08 | ||
| 1e8x_A | 961 | Structural Insights Into Phoshoinositide 3-Kinase E | 1e-06 | ||
| 1e7u_A | 961 | Structure Determinants Of Phosphoinositide 3-Kinase | 1e-06 | ||
| 3l54_A | 966 | Structure Of Pi3k Gamma With Inhibitor Length = 966 | 8e-06 | ||
| 3dbs_A | 960 | Structure Of Pi3k Gamma In Complex With Gdc0941 Len | 8e-06 | ||
| 3cst_A | 966 | Crystal Structure Of Pi3k P110gamma Catalytical Dom | 8e-06 | ||
| 4dk5_A | 959 | Crystal Structure Of Human Pi3k-Gamma In Complex Wi | 9e-06 | ||
| 3nzs_A | 954 | Structure-Based Optimization Of Pyrazolo -Pyrimidin | 9e-06 | ||
| 3ene_A | 959 | Complex Of Pi3k Gamma With An Inhibitor Length = 95 | 9e-06 | ||
| 1e8y_A | 966 | Structure Determinants Of Phosphoinositide 3-Kinase | 9e-06 | ||
| 3qaq_A | 960 | Crystal Structure Of Pi3k-Gamma In Complex With Tri | 9e-06 | ||
| 1he8_A | 965 | Ras G12v-Pi 3-Kinase Gamma Complex Length = 965 | 1e-05 | ||
| 4anu_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 1e-05 | ||
| 4anv_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 1e-05 | ||
| 3apc_A | 966 | Crystal Structure Of Human Pi3k-Gamma In Complex Wi | 1e-05 | ||
| 4anx_A | 980 | Complexes Of Pi3kgamma With Isoform Selective Inhib | 3e-05 | ||
| 4ajw_A | 934 | Discovery And Optimization Of New Benzimidazole- An | 3e-05 | ||
| 2wxf_A | 940 | The Crystal Structure Of The Murine Class Ia Pi 3-K | 3e-05 | ||
| 3zim_A | 940 | Discovery Of A Potent And Isoform-selective Targete | 1e-04 | ||
| 2rd0_A | 1096 | Structure Of A Human P110alpha/p85alpha Complex Len | 1e-04 | ||
| 3hhm_A | 1091 | Crystal Structure Of P110alpha H1047r Mutant In Com | 1e-04 | ||
| 4a55_A | 1096 | Crystal Structure Of P110alpha In Complex With Ish2 | 1e-04 | ||
| 3hiz_A | 1096 | Crystal Structure Of P110alpha H1047r Mutant In Com | 1e-04 |
| >pdb|2Y3A|A Chain A, Crystal Structure Of P110beta In Complex With Icsh2 Of P85beta And The Drug Gdc-0941 Length = 1092 | Back alignment and structure |
|
| >pdb|2X6F|A Chain A, The Crystal Structure Of The Drosophila Class Iii Pi3-Kinase Vps34 In Complex With 3-Methyladenine Length = 696 | Back alignment and structure |
| >pdb|3IHY|A Chain A, Human Pik3c3 Crystal Structure Length = 600 | Back alignment and structure |
| >pdb|3LS8|A Chain A, Crystal Structure Of Human Pik3c3 In Complex With 3-[4-(4- Morpholinyl)thieno[3,2-D]pyrimidin-2-Yl]-Phenol Length = 614 | Back alignment and structure |
| >pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase Enzymatic Mechanism And Signalling Length = 961 | Back alignment and structure |
| >pdb|3L54|A Chain A, Structure Of Pi3k Gamma With Inhibitor Length = 966 | Back alignment and structure |
| >pdb|3DBS|A Chain A, Structure Of Pi3k Gamma In Complex With Gdc0941 Length = 960 | Back alignment and structure |
| >pdb|3CST|A Chain A, Crystal Structure Of Pi3k P110gamma Catalytical Domain In Complex With Organoruthenium Inhibitor E5e2 Length = 966 | Back alignment and structure |
| >pdb|4DK5|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With A Pyridyl- Triazine Inhibitor Length = 959 | Back alignment and structure |
| >pdb|3NZS|A Chain A, Structure-Based Optimization Of Pyrazolo -Pyrimidine And -Pyridine Inhibitors Of Pi3-Kinase Length = 954 | Back alignment and structure |
| >pdb|3ENE|A Chain A, Complex Of Pi3k Gamma With An Inhibitor Length = 959 | Back alignment and structure |
| >pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin And Staurosporine Length = 966 | Back alignment and structure |
| >pdb|3QAQ|A Chain A, Crystal Structure Of Pi3k-Gamma In Complex With Triazine-Benzimidazole 1 Length = 960 | Back alignment and structure |
| >pdb|1HE8|A Chain A, Ras G12v-Pi 3-Kinase Gamma Complex Length = 965 | Back alignment and structure |
| >pdb|4ANU|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors. Length = 980 | Back alignment and structure |
| >pdb|4ANV|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors Length = 980 | Back alignment and structure |
| >pdb|3APC|A Chain A, Crystal Structure Of Human Pi3k-Gamma In Complex With Ch5132799 Length = 966 | Back alignment and structure |
| >pdb|4ANX|A Chain A, Complexes Of Pi3kgamma With Isoform Selective Inhibitors Length = 980 | Back alignment and structure |
| >pdb|4AJW|A Chain A, Discovery And Optimization Of New Benzimidazole- And Benzoxazole- Pyrimidone Selective Pi3kbeta Inhibitors For The Treatment Of Phosphatase And Tensin Homologue (Pten)-Deficient Cancers Length = 934 | Back alignment and structure |
| >pdb|2WXF|A Chain A, The Crystal Structure Of The Murine Class Ia Pi 3-Kinase P110delta In Complex With Pik-39. Length = 940 | Back alignment and structure |
| >pdb|3ZIM|A Chain A, Discovery Of A Potent And Isoform-selective Targeted Covalent Inhibitor Of The Lipid Kinase Pi3kalpha Length = 940 | Back alignment and structure |
| >pdb|2RD0|A Chain A, Structure Of A Human P110alpha/p85alpha Complex Length = 1096 | Back alignment and structure |
| >pdb|3HHM|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With Nish2 Of P85alpha And The Drug Wortmannin Length = 1091 | Back alignment and structure |
| >pdb|4A55|A Chain A, Crystal Structure Of P110alpha In Complex With Ish2 Of P85alpha And The Inhibitor Pik-108 Length = 1096 | Back alignment and structure |
| >pdb|3HIZ|A Chain A, Crystal Structure Of P110alpha H1047r Mutant In Complex With Nish2 Of P85alpha Length = 1096 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A Length = 614 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 4e-30
Identities = 85/526 (16%), Positives = 180/526 (34%), Gaps = 66/526 (12%)
Query: 1346 KQLAMDREEAQKLLDDRDNFLGLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLSSRQNVI 1405
++ A+ R + D+ L L + D + + S S+S +
Sbjct: 112 RRYAVARLR--QADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDS-QSSVSENVSNS 168
Query: 1406 KNMVDTIDEVQSYKFIPLVYQIASRMGSTKDALGLHNFQFALVSLVKKMAIDHPY--HTI 1463
ID Q TK+ N + L + + A + + +
Sbjct: 169 GINSAEIDSSQIITSPLPSVSSPPPASKTKEVPDGENLEQDLCTFLISRACKNSTLANYL 228
Query: 1464 FQLLA--LANGDRIKDKQRSRNSFVVDMDKKLAAENLLEELSSYHGAIIRQMKQMVDVYI 1521
+ + + D + ++ ++ M + A ++ +++ + VD +
Sbjct: 229 YWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLV 288
Query: 1522 KLA-ELETRREDTNKRIQLPREIRC-LRQLELVPVVTATVPIDCTCQYNEGSFPYFKGLA 1579
L ++ + K+ + + + ++ L V +P++ +
Sbjct: 289 HLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLE-------PQVKIRGIIP 341
Query: 1580 ESVMVMNGINAPKVVECFGSDGHKYRQLAKSGNDDLRQDAVMEQFFGLVNTFLRNHRDTW 1639
E+ + P + DG KY + K G+D LRQD ++ Q L++ LR
Sbjct: 342 ETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDD-LRQDQLILQIISLMDKLLRKE---- 396
Query: 1640 KRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREH 1699
L + YKV+ + G ++++ + G+ +
Sbjct: 397 NLDLKLTPYKVLATSTKHGFMQFIQSVP-----VAEVLDTEGSIQNF------------- 438
Query: 1700 MSNVKDKRIAFQEVCENFRPVLHYFFLERFLQPAYWFEKRLAYTRSVAASSMVGYIVGLG 1759
+ E Y +S A ++ YI+G+G
Sbjct: 439 ---------------------FRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVG 477
Query: 1760 DRHAMNILIDQATAEVVHIDLGVAFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEG--VF 1817
DRH N+L+ + T ++ HID G + P P +L +++++GMG T E F
Sbjct: 478 DRHLDNLLLTK-TGKLFHIDFGYILGRD---PKPLPPPMKLNKEMVEGMGGTQSEQYQEF 533
Query: 1818 RRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQRQKE 1863
R+ C +R +L + + + + AL P K +++ ++
Sbjct: 534 RKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQD 579
|
| >2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A* Length = 696 | Back alignment and structure |
|---|
| >2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} Length = 1092 | Back alignment and structure |
|---|
| >3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A Length = 1091 | Back alignment and structure |
|---|
| >2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* Length = 940 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A Length = 33 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1935 | |||
| 2x6h_A | 696 | GH13170P, VPS34, phosphotidylinositol 3 kinase 59F | 100.0 | |
| 3ls8_A | 614 | Phosphatidylinositol 3-kinase catalytic subunit ty | 100.0 | |
| 1e7u_A | 961 | Phosphatidylinositol 3-kinase catalytic subunit; p | 100.0 | |
| 2wxf_A | 940 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 100.0 | |
| 2y3a_A | 1092 | Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca | 100.0 | |
| 3hhm_A | 1091 | Phosphatidylinositol-4,5-bisphosphate 3-kinase cat | 100.0 | |
| 1w1n_A | 33 | Phosphatidylinositol 3-kinase TOR1; target of rapa | 99.29 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 95.34 | |
| 3ieg_A | 359 | DNAJ homolog subfamily C member 3; TPR motif, chap | 95.16 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 94.17 | |
| 1w3b_A | 388 | UDP-N-acetylglucosamine--peptide N-acetylglucosami | 94.13 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 93.63 | |
| 2xpi_A | 597 | Anaphase-promoting complex subunit CUT9; cell cycl | 92.94 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 90.34 | |
| 3hym_B | 330 | Cell division cycle protein 16 homolog; APC, anaph | 89.02 | |
| 2gw1_A | 514 | Mitochondrial precursor proteins import receptor; | 84.34 | |
| 2y4t_A | 450 | DNAJ homolog subfamily C member 3; chaperone, endo | 83.96 | |
| 4gco_A | 126 | Protein STI-1; structural genomics, PSI-biology, m | 81.0 |
| >2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-58 Score=586.89 Aligned_cols=469 Identities=19% Similarity=0.315 Sum_probs=342.6
Q ss_pred HHHHHHHHHHhccCCCcchHHHHHHHHHHHhcC------------ccHHHHHHHHHhhhcccccchhhhhHHHHhhcCCC
Q 000172 1367 GLALEGYKRCLVIGDKYDVRVVFRLVSLWFSLS------------SRQNVIKNMVDTIDEVQSYKFIPLVYQIASRMGST 1434 (1935)
Q Consensus 1367 ~~Al~~Yl~sL~~s~~~~~~~i~RllsLWl~~~------------~~~~v~~~~~~~~~~vp~~kfl~~lpQL~srL~~~ 1434 (1935)
..|+.-|++|+.+.+......+..+|.-|=..+ .++.|.++..+.+.+.+....+..+|||++.|.++
T Consensus 76 ~~aL~kfL~sv~W~~~~e~~~a~~lL~~W~~~~~~dALeLL~~~f~~~~VR~yAV~~L~~~~de~L~~YLlQLVQALKyE 155 (696)
T 2x6h_A 76 KKALTKFLKCINWKLEDEVTQALWMLANWAPMDVEDALELLSPTFTHPQVRKYAVSRLAQAPDEDLLLYLLQLVQALKYE 155 (696)
T ss_dssp HHHHHHHGGGTTTSCHHHHHHHHHHHHHSCCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHGGGS
T ss_pred hhHHHHHHhhCCCCCHHHHHHHHHHHhcCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHhc
Confidence 479999999999998776667899999997654 35678999999999999999999999999999987
Q ss_pred cccc----------------------------------------------------------------------------
Q 000172 1435 KDAL---------------------------------------------------------------------------- 1438 (1935)
Q Consensus 1435 ~~~~---------------------------------------------------------------------------- 1438 (1935)
.-..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (696)
T 2x6h_A 156 DPRHIVHLHGCIFPERDVVRSILDDNGSLLDQSSLSDLSATSSGLHASVIPANQRAASVLAAIKSDKSVSPGSAGGSGSG 235 (696)
T ss_dssp CHHHHHHHHHHHC-------------------------------------------------------------------
T ss_pred chhhhcccccccccchhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2000
Q ss_pred -------c--c---------------------c------cHHHHHHHHHHHHHHhCCc---hhHHHHHHhccccchhhhh
Q 000172 1439 -------G--L---------------------H------NFQFALVSLVKKMAIDHPY---HTIFQLLALANGDRIKDKQ 1479 (1935)
Q Consensus 1439 -------~--~---------------------~------~f~~~L~~Ll~ri~~~hP~---~~ly~L~a~~~s~~~~~~~ 1479 (1935)
+ . . .....|..+|.+.+...|. +.+|.|.+....+....
T Consensus 236 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~La~FLl~rA~~n~~i~h~l~W~L~~e~~~~~~~~-- 313 (696)
T 2x6h_A 236 GQGSVALPNPSAPATPGSSSLPCDSNSNALMLAEGISFGSVPANLCTFLIQRACTNATLANYFYWYLSIEVEEVESVR-- 313 (696)
T ss_dssp -------------------------------------------CHHHHHHHHHTTCHHHHHHHHHHHHHHHCC-------
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCHHHHHHHHHHhhChhhHHHHHHHhHhhccCccccc--
Confidence 0 0 0 0145688899999988774 68888877654311000
Q ss_pred ccccchhhhhhHH-HHHHHHHHHHHh------hHHHHHHHHHHHHHHHHHHHhhh-hcccccccccc-chhhhhhcc--c
Q 000172 1480 RSRNSFVVDMDKK-LAAENLLEELSS------YHGAIIRQMKQMVDVYIKLAELE-TRREDTNKRIQ-LPREIRCLR--Q 1548 (1935)
Q Consensus 1480 r~~~~~~v~~~r~-~aa~~il~~l~~------~~~~~~~~~~~l~~~~~~La~~~-~~~e~~~~~~~-~~~~l~~l~--~ 1548 (1935)
.+.... ..+. ...+.++..+.+ .....+..-..+++.+.+++..- ..+....+++. +...+.... .
T Consensus 314 -~~~~~~--~~~~~~il~~~l~~l~~g~~~~~~~~~~l~~Q~~~~~~L~~i~~~ik~~~~~~~~k~e~L~~~L~~~~~~~ 390 (696)
T 2x6h_A 314 -KQDERA--HDMYAMVLKMFLKVLENGNFNLRGIFYNLRKQRRFIDELVKLVKLVAKEPGNRNKKTEKFQKLLAEQDMFK 390 (696)
T ss_dssp -CCHHHH--HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHHHSTTSSS
T ss_pred -cccchH--HHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHhcchhhcc
Confidence 000000 0000 112333433332 12233344445677777766532 11111111111 111111110 0
Q ss_pred cccccccccccCCCCCCcccCCCccccccccc-eEEEecCCCcceEEEEEecC-CcEEEeeeecCCCcchhhHHHHHHHH
Q 000172 1549 LELVPVVTATVPIDCTCQYNEGSFPYFKGLAE-SVMVMNGINAPKVVECFGSD-GHKYRQLAKSGNDDLRQDAVMEQFFG 1626 (1935)
Q Consensus 1549 l~~vp~~t~~lpi~~~~~y~~g~~~~I~~f~~-~~~v~~s~~~Pk~i~~~gsd-Gk~y~~L~K~G~dDlRqD~r~~Qlf~ 1626 (1935)
..+..+....+|.+| ...|.+|.+ .+.|++|+++||+|+|+|+| |+.|.||+|+ +||+|||+|+||+|+
T Consensus 391 ~~l~~~~~~~lP~~p--------~v~I~~~~~~~~~V~~S~~~P~~l~~~gsD~G~~y~~i~K~-gDDLRQD~rv~Ql~~ 461 (696)
T 2x6h_A 391 VNFTNFEPIPFPLDP--------EIYITKIVPMRTSLFKSALMPAKLTFVTSIAHHEYAAIFKH-GDDLRQDQLILQMIT 461 (696)
T ss_dssp SCTTSCCCEECSSCT--------TSEEEEECGGGCEECSSSSCCEEEEEEETTTTCEEEEEEEC-SSCTHHHHHHHHHHH
T ss_pred cccccCCCccCCCCC--------CeEEEEEecCeEEEcccccCCeEEEEEecCCCCceeEEEec-CcccchhHHHHHHHH
Confidence 001111113344333 257889986 68999999999999999999 9999999995 599999999999999
Q ss_pred HHHHHHHcCcccccCCeeeecceEEEcCCCCceeeecCCCCchHHHhhhhccCCCCCCCCCCCCchhhHhhhhhcchhhH
Q 000172 1627 LVNTFLRNHRDTWKRRLGVRTYKVVPFTPSAGILEWVDGTVPLGDYLIGSTRNGGAHGRYGIGDWSFLKCREHMSNVKDK 1706 (1935)
Q Consensus 1627 lvN~lL~~~~et~rR~L~i~tY~ViPLs~~~GLIE~v~~t~tL~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 1706 (1935)
+||.+|++++ |+|.+++|+|||+++++||||||+ ++|+++|+... +
T Consensus 462 lmn~il~~~~----~~L~i~~Y~Vipls~~~GLIE~V~-s~tl~~i~~~~----------~------------------- 507 (696)
T 2x6h_A 462 LMDKLLRREN----LDLKLTPYKVLATSSKHGFLQYVD-SCTVAEVLARE----------G------------------- 507 (696)
T ss_dssp HHHHHHHHTT----CCCCCCCCCEEESSTTCEEEECCC-CEEHHHHHHHS----------S-------------------
T ss_pred HHHHHHHhCC----CCcEEeccEEEeccCCCCeeeeCC-CccHHHHHHhc----------C-------------------
Confidence 9999999985 899999999999999999999997 57999988531 0
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhccCChHHH----HHHHHHHHHHHHHHHHHhhcccCCCCCCeEEEecCCCcEEEeecch
Q 000172 1707 RIAFQEVCENFRPVLHYFFLERFLQPAYWF----EKRLAYTRSVAASSMVGYIVGLGDRHAMNILIDQATAEVVHIDLGV 1782 (1935)
Q Consensus 1707 ~~~f~~i~~~~~pvl~~~f~~~f~~p~~w~----~~R~~FtrS~A~~S~vgYILGLGDRH~~NILid~~TG~vvHIDfg~ 1782 (1935)
-+++||.+.||++..|| ++|++|++|+|+|||+|||||||||||+|||||+ ||+++|||||+
T Consensus 508 -------------~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGlGDRH~~NILid~-tG~v~HIDFG~ 573 (696)
T 2x6h_A 508 -------------NIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGVGDRHLDNLLLTT-NGKLFHIDFGY 573 (696)
T ss_dssp -------------SHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTCCCCCTTTEEECT-TSCEEECCCCS
T ss_pred -------------hHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHccCCCCCCcceEEeC-CCCEEEEeehh
Confidence 14678999999998887 7999999999999999999999999999999994 99999999999
Q ss_pred hhccccCCCCCCCCCccccHHHHhhccccccchh--hHHHHHHHHHHHhcChHHHHHHHHHHccCCCcccccChhHHHhh
Q 000172 1783 AFEQGLMLKTPERVPFRLTRDIIDGMGVTGVEGV--FRRCCEKTLSVMRTNKEALLTIVEVFIHDPLYKWALSPLKALQR 1860 (1935)
Q Consensus 1783 ~F~~g~~l~~pE~VPFRLTrniv~~mG~~GveG~--Fr~~~~~t~~~LR~~~~~l~~iL~~fl~DPL~~W~~~~~k~~~~ 1860 (1935)
+|+++ +.||.|||||||||+++||+.|++|. |+.+|+.++++||++++.|++++++|++||+.+|...+.
T Consensus 574 ~f~~~---p~pe~VPFRLT~~mv~~mG~~g~eg~~~Fr~~c~~~~~~LR~~~~~il~ll~lml~~~lp~~~~~~~----- 645 (696)
T 2x6h_A 574 ILGRD---PKPMPPPMKLSKEMVEAMGGISSEHHHEFRKQCYTAYLHLRRHANVMLNLFSLMVDATVPDIALEPD----- 645 (696)
T ss_dssp CTTCC---SSSCCCSSCCCHHHHHHTTSSSSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTCCCTTTTSSGG-----
T ss_pred hhccC---CCCcCCCeecCHHHHHHhCCCCcccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHcCCCCccccCHH-----
Confidence 99988 47999999999999999999999985 999999999999999999999999999999999964331
Q ss_pred hhccccccccCCCCCccccccchhHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHhcCch--hhhhhCccccc
Q 000172 1861 QKEMDDDLETGLEGPEDEYEGNKDAERALIRVKQKLDGYEGGEMRSVHGQVQQLIQDAIDPE--RFCLMFPGWGA 1933 (1935)
Q Consensus 1861 ~~~~~~~~~~~~~~~~~~~~~n~~a~~~l~rv~~KL~g~~~~~~lsV~~qV~~LI~~Atd~~--NLa~m~~gW~P 1933 (1935)
.++..+++|+...... -....+|..||++|.+.- ++--++..|..
T Consensus 646 --------------------------~~i~~l~~rf~l~lse--eea~~~~~~lI~~S~~s~~t~~~d~~h~~aq 692 (696)
T 2x6h_A 646 --------------------------KAVKKVEENLQLGLTD--EEAVQHLQSLLDVSITAVMPALVEQIHRFTQ 692 (696)
T ss_dssp --------------------------GHHHHHHHHHTTTSCH--HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred --------------------------HHHHHHHHHhCCCCCH--HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 2466777887652211 124568899999997744 44444455544
|
| >3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A | Back alignment and structure |
|---|
| >2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* | Back alignment and structure |
|---|
| >2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus} | Back alignment and structure |
|---|
| >3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A | Back alignment and structure |
|---|
| >1w1n_A Phosphatidylinositol 3-kinase TOR1; target of rapamycin, Ser/Thr kinase, redox-regulation, disulfide bond, transferase; NMR {Saccharomyces cerevisiae} PDB: 2kio_A 2kit_A | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
| >3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus} | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
| >1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1 | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A | Back alignment and structure |
|---|
| >4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1935 | ||||
| d1e7ua4 | 369 | d.144.1.4 (A:726-1094) Phoshoinositide 3-kinase (P | 5e-55 |
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1935 | |||
| d1e7ua4 | 369 | Phoshoinositide 3-kinase (PI3K), catalytic domain | 100.0 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 91.14 | |
| d1w3ba_ | 388 | O-GlcNAc transferase p110 subunit, OGT {Human (Hom | 84.88 | |
| d1e7ua1 | 201 | Phoshoinositide 3-kinase (PI3K) helical domain {Pi | 82.72 |
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|