Citrus Sinensis ID: 000211

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------1640------1650------1660------1670------1680------1690------1700------1710------1720------1730------1740------1750------1760------1770------1780------1790------1800------1810------1820------1830------1840------1850--

MSRVARWKVEKTKVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTVQLLTSKTGFREFEQQRELRERGLQSGNDQISPDQSCGGINNQLDKVNARVRFKDKSKELPSLEEEAGLNEDYTESAVGFDGSSNTSESLYAEKHDASSTHEIDSLKSIVSGDLAGLNQSLQQEKGDPSDQRFSAQGTNDWVPGWGLDYSADNDLAIAHEENNRLRGCLEMAESSIHELKLEVSSLQSHADEIGMEAQNFAQKLAAEIASGEQLAEEVSALKSECSHLKSDLERLIKLRSCHPFTSWEAVKQGTEITMSTPNLVTCDRSKVNEIGEISLNKYEQYLSGTGLETELYQPDLDMLHCVGIPALASHEHSSVNPADSVGGKIFELLRELDESKAERESLAKKMDQMECYYEALIQELEENQRHMLGELQNLRNEHSSCLYTVSSAKAEIEAMRLDVDEQVLRFSEERRDLESLNKELERRAVSAEAALKRARLNYSIAVNQLQKDLELLSSQVLSMYQTNENLIKQAFVDSPQPTCQEYQDMVQNRKLNPEESHANRHLACQDQYIGVKKQHLGGDILIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEIRLMKERMDELSHQLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLESNLQDVTCENRHLTQKLSEWESLMMDFKSFQSKYEAIAAEKTELANLLEKESLENGNLRRETSLLQKELETVKIDFDELASVNKNLQRTINNLQNKMHDMLSSYGESFSELCLHNKSADQNLESKDLTSVIMRLEVLQRNACQKIRQLMQEKKALIDEKDRAEMSFSKSESDIVLVKQKFEHDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVSSEVEENNAQRHTDLFSDLDYLEVELQQLSSKNRDLAQEILALQVVTEEFDRSKQTISELTEENRALMVALQDKSEESVKLALEVDSFKQSFQSLHDELLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQKTAVLTKENQDLMVSLQNKSEEAAKLAVELDSVRNSLQSVHDELHGERSLSDELKSRAIDISSQLNEKQQQLIDFDQQNSEMIQKIAELTSENQALMVSLQEYAEESSRLASEGNTSKETLQSLRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLDLDQQKSELVQLKLLVLDLESEKSRASEESSSVTSLQSELSEMHELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSAIAENRVLFHENNSLIAQSEEYKSRAETMADNYGEHKSQLALEVERMKQLLVGSEEEIDDLMMSREELEIKVVVLKAKLAEQHAQVISSEGYIDEQKMLQNQCNELRRKLSEQILKTEEFRNLSIHLKELKDKADAECLKLHEKRESEGLPTGMQESLRIAFIKEQCETKVQELKHHLSISKKHSEEMLWKLQDAIDEIENRKKSEAAHLKKNEELGVKILELEAELQSLISDKREKTKAYDLAKAELECSLMSLECCKEEKEKLEVSLHECNEEKSRLYSDLSLMKKLLYSSTFPCRKEGNDGLHKESCISNELTGRNVQKTTNADTKSHGRMSADDTGNGPTGDVDEYLEHENMTNGIDAQNLCLGLSDEGSYSCTLMKEHPEQDVLQSSCLNGSSSLALVNQENTKSNDTKDLAIINDQFRVQSLKSSMDLLNEEVRVWCNVREV

cccccccccccccccEEEEEccccccccccccccEEEEEEEcccccccccccccccccccccccccHHHHHHccccccccccccccEEEEEEcccccccccHHHHccccccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHccccccccccHHHHcccccHHHHHcccccccccccccHHHHHcccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHccccHHHHHHccccccccccccHHHcccccHHHHHHHHccccHHHHcHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc

cccccccccccccEEEEEEEEEEEEEcccccccEEEEEEEEcccccEEEEEcEEEEccccccccccEEEEEEEcccccccccccEEEEEEEEccccccccEEEEEEEHHHHHHcccccEEEEEcccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccEccccccccccHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHcccHEEccccccccHccHcHHHHcccccccccHHHHHHHccccccHHHHHHHHcHHHHHHHHHHHcccccHHHHHHHHccccHHccccHHHcccccccccEEEccHHHHHHHHHHHHHccccEEEEEEcccc

msrvarwkveKTKVKVVFRLQFHATHIQQTGWDKLFISfipadsgkaigkttkanvrngtckwadpiYETTRLLQDIKTKQYDEKLYKFVVAMgssrssilgeatinladyadaskpstvllplhggdsgtILHVTVQLLTSKTGFREFEQQRELRERGlqsgndqispdqscgginnqLDKVNARVrfkdkskelpsleeeaglnedytesavgfdgssntseslyaekhdasstheidslksivsGDLAGLNQslqqekgdpsdqrfsaqgtndwvpgwgldysadndLAIAHEENNRLRGCLEMAESSIHELKLEVSSLQSHADEIGMEAQNFAQKLAAEIASGEQLAEEVSALKSECSHLKSDLERLIKLrschpftsweavkqgteitmstpnlvtcdrskvneigeiSLNKYEQYLsgtgletelyqpdldmlhcvgipalashehssvnpadsvggKIFELLRELDESKAERESLAKKMDQMECYYEALIQELEENQRHMLGELQNLRNEHSSCLYTVSSAKAEIEAMRLDVDEQVLRFSEERRDLESLNKELERRAVSAEAALKRARLNYSIAVNQLQKDLELLSSQVLSMYQTNENLIKqafvdspqptcqEYQDMVqnrklnpeeshanrhlacqDQYIgvkkqhlggdiLIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEIRLMKERMDELSHQLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLesnlqdvtcenrHLTQKLSEWESLMMDFKSFQSKYEAIAAEKTELANLLEKeslengnlrRETSLLQKELETVKIDFDELASVNKNLQRTINNLQNKMHDMLSSYGESFSELCLHNksadqnleskdLTSVIMRLEVLQRNACQKIRQLMQEKKALIDEkdraemsfsksesDIVLVKQKFEHDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVSSEVEENNAQRHTDLFSDLDYLEVELQQLSSKNRDLAQEILALQVVTEEFDRSKQTISELTEENRALMVALQDKSEESVKLALEVDSFKQSFQSLHDELLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQKTAVLTKENQDLMVSLQNKSEEAAKLAVELDSVRNSLQSVHDelhgerslsdelKSRAIDISSQLNEKQQQLIDFDQQNSEMIQKIAELTSENQALMVSLQEYAEESSrlasegntskETLQSLRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLDLDQQKSELVQLKLLVLDLEseksraseesssVTSLQSELSEMHELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSAIAENRVLFHENNSLIAQSEEYKSRAETMADNYGEHKSQLALEVERMKQLLVGSEEEIDDLMMSREELEIKVVVLKAKLAEQHAQVISSEGYIDEQKMLQNQCNELRRKLSEQILKTEEFRNLSIHLKELKDKADAECLKLHEkreseglptgmQESLRIAFIKEQCETKVQELKHHLSISKKHSEEMLWKLQDAIDEIENRKKSEAAHLKKNEELGVKILELEAELQSLISDKREKTKAYDLAKAELECSLMSLECCKEEKEKLEVSLHECNEEKSRLYSDLSLMKKLLysstfpcrkegndglhkescisneltgrnvqkttnadtkshgrmsaddtgngptgdvdeylehenmtngidaqnlclglsdegsysctlmkehpeqdvlqssclngssslalvnqentksndtkdlaiINDQFRVQSLKSSMDLLNEEVRVWCNVREV

msrvarwkvektkvKVVFRLQFHathiqqtgwDKLFISFIPAdsgkaigkttkanvrngtckwadpiyETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTVQLLTSKTGFREFEQQRELRERGLqsgndqispdqscgginNQLDKVNARVrfkdkskelpsleeeaglnedyteSAVGFDGSSNTSESLYAEKHDASSTHEIDSLKSIVSGDLAGLNQSLQQEKGDPSDQRFSAQGTNDWVPGWGLDYSADNDLAIAHEENNRLRGCLEMAESSIHELKLEVSSLQSHADEIGMEAQNFAQKLAAEIASGEQLAEEVSALKSECSHLKSDLERLIKLRSCHPFtsweavkqgteitmstpnlvtcdrskVNEIGEISLNKYEQYLSGTGLETELYQPDLDMLHCVGIPALASHEhssvnpadsvGGKIFELLRELDESKAERESLAKKMDQMECYYEALIQELEENQRHMLGELQNLRNEHSSCLYTVSSAKAEIEAMRLDVDEQVLRfseerrdleslnkelERRAVSAEAALKRARLNYSIAVNQLQKDLELLSSQVLSMYQTNENLIKQAFVDSPQPTCQEYQDMVQNRKLNPEESHANRHLACQDQYIGVKKQHLGGDILIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEIRLMKERMDELSHQLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLESNLQDVTCENRHLTQKLSEWESLMMDFKSFQSKYEAIAAEKTELANLLekeslengnlrrETSLLQKELETVKIDFDELASVNKNLQRTINNLQNKMHDMLSSYGESFSELCLHNKSADQNLESKDLTSVIMRLEVLQRNACQKIRQLMQEKKALidekdraemsfsksesdiVLVKQKFEHDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVsseveennaqrhtdlfsdLDYLEVELQQLSSKNRDLAQEILALqvvteefdrskQTISELTEENRALMVALQDKSEESVKLALEVDSFKQSFQSLHDELLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQKTAVLTKENQDLMVSLQNKSEEAAKLAVELDSVRNSLQSvhdelhgerslsdelKSRAIDISSQLNEKQQQLIDFDQQNSEMIQKIAELTSENQALMVSLQEYAEESsrlasegntsketLQSLRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLDLDQQKSELVQLKLLVLDLeseksraseesssvtsLQSELSEMHELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSAIAENRVLFHENNSLIAQSEEYKSRAETMADNYGEHKSQLALEVERMKQLLVGSEEEIDDLMMSREELEIKVVVLKAKLAEQHAQVISSEGYIDEQKMLQNQCNELRRKLSEQILKTEEFRNLSIHLKELKDKADAECLKLHekreseglptgmQESLRIAFIKEQCETKVQELKHHLSISKKHSEEMLWKLQDAIDEIENRKKSEAAHLKKNEELGVKILELEAELQSlisdkrektKAYDLAKAELECSLMSLECCKEEKEKLEVSLHECNEEKSRLYSDLSLMKKLLYSSTFPCRKEGNDGLHKEscisneltgrnvqkttnadtkshgrmsaddtgngPTGDVDEYLEHENMTNGIDAQNLCLGLSDEGSYSCTLMKEHPEQDVLQSSCLNGSSSLALVNQENtksndtkdlaiINDQFRVQSLKSsmdllneevrvwcnvrev

MSRVARWKVEKTKVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTVQLLTSKTgfrefeqqrelrerglQSGNDQISPDQSCGGINNQLDKVNARVRFKDKSKELPSLEEEAGLNEDYTESAVGFDGSSNTSESLYAEKHDASSTHEIDSLKSIVSGDLAGLNQSLQQEKGDPSDQRFSAQGTNDWVPGWGLDYSADNDLAIAHEENNRLRGCLEMAESSIHELKLEVSSLQSHADEIGMEAQNFAQKLAAEIASGEQLAEEVSALKSECSHLKSDLERLIKLRSCHPFTSWEAVKQGTEITMSTPNLVTCDRSKVNEIGEISLNKYEQYLSGTGLETELYQPDLDMLHCVGIPALASHEHSSVNPADSVGGKIFELLRELDESKAERESLAKKMDQMECYYEALIQELEENQRHMLGELQNLRNEHSSCLYTVSSAKAEIEAMRLDVDEQVLRFSEERRDLESLNKELERRAVSAEAALKRARLNYSIAVNQLQKDLELLSSQVLSMYQTNENLIKQAFVDSPQPTCQEYQDMVQNRKLNPEESHANRHLACQDQYIGVKKQHLGGDILIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEIRLMKERMDELSHQLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLESNLQDVTCENRHLTQKLSEWESLMMDFKSFQSKYEAIAAEKTELANLLEKESLENGNLRRETSLLQKELETVKIDFDELASVNKNLQRTINNLQNKMHDMLSSYGESFSELCLHNKSADQNLESKDLTSVIMRLEVLQRNACQKIRQLMQEKKALIDEKDRAEMSFSKSESDIVLVKQKFEHDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVSSEVEENNAQRHTDLFSDLDYLEVELQQLSSKNRDLAQEILALQVVTEEFDRSKQTISELTEENRALMVALQDKSEESVKLALEVDSFKQSFQSLHDELLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQKTAVLTKENQDLMVSLQNKSEEAAKLAVELDSVRNSLQSVHDELHGERSLSDELKSRAIDISSQLNEKQQQLIDFDQQNSEMIQKIAELTSENQALMVSLQEYAEESSRLASEGNTSKETLQSLRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLDLDqqkselvqlkllvldleseksraseesssvtslqselseMHELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSAIAENRVLFHENNSLIAQSEEYKSRAETMADNYGEHKSQLALEVERMKQLLVGSEEEIDDLMMSREELEIKVVVLKAKLAEQHAQVISSEGYIDEQKMLQNQCNELRRKLSEQILKTEEFRNLSIHLKELKDKADAECLKLHEKRESEGLPTGMQESLRIAFIKEQCETKVQELKHHLSISKKHSEEMLWKLQDAIDEIENRKKSEAAHLKKNEELGVKILELEAELQSLISDKREKTKAYDLAKAELECSLMSlecckeekekleVSLHECNEEKSRLYSDLSLMKKLLYSSTFPCRKEGNDGLHKESCISNELTGRNVQKTTNADTKSHGRMSADDTGNGPTGDVDEYLEHENMTNGIDAQNLCLGLSDEGSYSCTLMKEHPEQDVLQSSCLNGSSSLALVNQENTKSNDTKDLAIINDQFRVQSLKSSMDLLNEEVRVWCNVREV

*****RWKVEKTKVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTVQLLTSKTGF********************************************************************************************************************************NDWVPGWGLDYSADNDLAIAHEENNRLRGCLEM*******************************************************HLKSDLERLIKLRSCHPFTSWEAVKQGTEITMSTPNLVTCDRSKVNEIGEISLNKYEQYLSGTGLETELYQPDLDMLHCVGIPALAS**************KIFELL*******************MECYYEALIQELE*****MLGELQNL***HSSCLYTVSSAKAEIEAMRLDV******************************ALKRARLNYSIAVNQLQKDLELLSSQVLSMYQTNENLIKQAFV****************************HLACQDQYIGVKKQHLGGDILIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEI**********************LLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLESNLQDVTCENRHLTQKLSEWESLMMDFKSFQSKYEAIAAE****************************LETVKIDFDELASVNKNLQRTINNL**************FSELCL*************LTSVIMRLEVLQRNACQKIRQL************************IVLVKQKFEHDLRNMIDKQSVSNALLQKLQLRFEAVADKL***************DLFSDLDYLEVELQQL*****DLAQEILALQVVTEE******************************************************************************************************************************************************************************************************************************************L***LNEKHCQLLDLDQQKSELVQLKLLVLD*************************HELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSAIAENRVLFHE***************************************L*********LMMSREELEIKVVVLKAKLAEQHAQVISSEGYIDEQKMLQNQCN********QILKTEEFRNLSIHLK*****************************LRIAFIKEQCETKVQELKHH**********MLWKLQ***********************GVKILELEAELQ*L*********AYDLAKAELECSLMSLECCKEE***LEVSLHEC*****RLYSDLSLMKKLLYSSTFPC************************************************************NGIDAQNLCLGLSDEGSYSCTL************************************LAIINDQFRVQSLKSSMDLLNEEVRVWCNV***

***********T***VVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTV***************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************VWCNVR*V

********VEKTKVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTVQLLTSKTGFREFEQQRELRERGLQSGNDQISPDQSCGGINNQLDKVNARVRFKDKSKELPSLEEEAGLNEDYTESAVGFDGSSNTSE**************IDSLKSIVSGDLAGLNQS**************AQGTNDWVPGWGLDYSADNDLAIAHEENNRLRGCLEMAESSIHELKLEVSSLQSHADEIGMEAQNFAQKLAAEIASGEQLAEEVSALKSECSHLKSDLERLIKLRSCHPFTSWEAVKQGTEITMSTPNLVTCDRSKVNEIGEISLNKYEQYLSGTGLETELYQPDLDMLHCVGIPALAS********ADSVGGKIFELLRELDESKAERESLAKKMDQMECYYEALIQELEENQRHMLGELQNLRNEHSSCLYTVSSAKAEIEAMRLDVDEQVLRFSEERRDLESLNKELERRAVSAEAALKRARLNYSIAVNQLQKDLELLSSQVLSMYQTNENLIKQAFVDSPQPTCQEYQDMVQNRKLNPEESHANRHLACQDQYIGVKKQHLGGDILIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEIRLMKERMDELSHQLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLESNLQDVTCENRHLTQKLSEWESLMMDFKSFQSKYEAIAAEKTELANLLEKESLENGNLRRETSLLQKELETVKIDFDELASVNKNLQRTINNLQNKMHDMLSSYGESFSELCLHNKSADQNLESKDLTSVIMRLEVLQRNACQKIRQLMQEKKALIDEKDRAEMSFSKSESDIVLVKQKFEHDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVSSEVEENNAQRHTDLFSDLDYLEVELQQLSSKNRDLAQEILALQVVTEEFDRSKQTISELTEENRALMVALQDKSEESVKLALEVDSFKQSFQSLHDELLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQKTAVLTKENQDLMVSLQNKSEEAAKLAVELDSVRNSLQSVHDELHGERSLSDELKSRAIDISSQLNEKQQQLIDFDQQNSEMIQKIAELTSENQALMVSLQE*********************LRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLDLDQQKSELVQLKLLVLDLE********************SEMHELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSAIAENRVLFHENNSLIAQSEEYKSRAETMADNYGEHKSQLALEVERMKQLLVGSEEEIDDLMMSREELEIKVVVLKAKLAEQHAQVISSEGYIDEQKMLQNQCNELRRKLSEQILKTEEFRNLSIHLKELKDKADAECLKLHEKRESEGLPTGMQESLRIAFIKEQCETKVQELKHHLSISKKHSEEMLWKLQDAIDEIENRKKSEAAHLKKNEELGVKILELEAELQSLISDKREKTKAYDLAKAELECSLMSLECCKEEKEKLEVSLHECNEEKSRLYSDLSLMKKLLYSSTFPCRKEGNDGLHKESCISNELTGRNVQK******************NGPTGDVDEYLEHENMTNGIDAQNLCLGLSDEGSYSCTLMKEHPEQDVLQSSCLNGSSSLALVNQENTKSNDTKDLAIINDQFRVQSLKSSMDLLNEEVRVWCNVREV

**********KTKVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTVQLLTSK**************************************************************************************************************************************************DLAIAHEENNRLRGCLEMAESSIHELKLEVSSLQSHADEIGMEAQNFAQKLAAEIASGEQLAEEVSALKSECSHLKSDLERLIKLRSCHPFTSWEAVKQGTEITMSTPNLVTCDRSKVNEIGEISLNKYEQYLSGTGLETELYQPDLDMLHCVGIPALASHEHSSVNPADSVGGKIFELLRELDESKAERESLAKKMDQMECYYEALIQELEENQRHMLGELQNLRNEHSSCLYTVSSAKAEIEAMRLDVDEQVLRFSEERRDLESLNKELERRAVSAEAALKRARLNYSIAVNQLQKDLELLSSQVLSMYQTNENLIKQAFVDSPQPTCQEYQDMVQNRKLNPEESHANRHLACQDQYIGVKKQHLGGDILIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEIRLMKERMDELSHQLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLESNLQDVTCENRHLTQKLSEWESLMMDFKSFQSKYEAIAAEKTELANLLEKESLENGNLRRETSLLQKELETVKIDFDELASVNKNLQRTINNLQNKMHDMLSSYGESFSELCLHNKSADQNLESKDLTSVIMRLEVLQRNACQKIRQLMQEKKALIDEKDRAEMSFSKSESDIVLVKQKFEHDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVSSEVEENNAQRHTDLFSDLDYLEVELQQLSSKNRDLAQEILALQVVTEEFDRSKQTISELTEENRALMVALQDKSEESVKLALEVDSFKQSFQSLHDELLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQKTAVLTKENQDLMVSLQNKSEEAAKLAVELDSVRNSLQSVHDELHGERSLSDELKSRAIDISSQLNEKQQQLIDFDQQNSEMIQKIAELTSENQALMVSLQEYAEESSRLASEGNTSKETLQSLRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLDLDQQKSELVQLKLLVLDLESEKSRASEESSSVTSLQSELSEMHELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSAIAENRVLFHENNSLIAQSEEYKSRAETMADNYGEHKSQLALEVERMKQLLVGSEEEIDDLMMSREELEIKVVVLKAKLAEQHAQVISSEGYIDEQKMLQNQCNELRRKLSEQILKTEEFRNLSIHLKELKDKADAECLKLHEKRESEGLPTGMQESLRIAFIKEQCETKVQELKHHLSISKKHSEEMLWKLQDAIDEIENRKKSEAAHLKKNEELGVKILELEAELQSLISDKREKTKAYDLAKAELECSLMSLECCKEEKEKLEVSLHECNEEKSRLYSDLSLMKKLLYSSTFPCRKEGNDGLHKESCISNELTGRNVQKTT*******GR*SA***GNGPTGDVDEYLEHENMTNGIDAQNLCLGLSDEGSYSCTLMKEHPEQDVLQSSCLNGSSSLALVNQENTKSNDTKDLAIINDQFRVQSLKSSMDLLNEEVRVWCNVR**

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MSRVARWKVEKTKVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTVQLLTSKTGFREFEQQRELRERGLQSGNDQISPDQSCGGINNQLDKVNARVRFKDKSKELPSLEEEAGLNEDYTESAVGFDGSSNTSESLYAEKHDASSTHEIDSLKSIVSGDLAGLNQSLQQEKGDPSDQRFSAQGTNDWVPGWGLDYSADNDLAIAHEENNRLRGCxxxxxxxxxxxxxxxxxxxxxADEIGMEAQNFAQKLAAEIASGEQLAEExxxxxxxxxxxxxxxxxxxxxRSCHPFTSWEAVKQGTEITMSTPNLVTCDRSKVNEIGEISLNKYEQYLSGTGLETELYQPDLDMLHCVGIPALASHEHSSVNPADSVGGKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHSSCLYTVSSAKAEIEAMRLDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxYSIAVNQLQKDLELLSSQVLSMYQTNENLIKQAFVDSPQPTCQEYQDMVQNRKLNPEESHANRHLACQDQYIGVKKQHLGGDILIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTxxxxxxxxxxxxxxxxxxxxxLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQxxxxxxxxxxxxxxxxxxxxxLSEWESLMMDFKSFQSKYEAIAAExxxxxxxxxxxxxxxxxxxxxTSLLQKELETVKIDxxxxxxxxxxxxxxxxxxxxxxxxxxxxYGESFSELCLHNKSADQNLESKDLTSVIMRLEVLxxxxxxxxxxxxxxxxxxxxxxxxxxxxFSKSESDIVLVKQKFEHDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVSSEVEENNAQRHTDLFSDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSVKLALEVDSFKQSFQSLHDELLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQKTAVLTKENQDLMVSxxxxxxxxxxxxxxxxxxxxxLQSVHDELHGERSLSDELKSRAIDISSQxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxSSRLASEGNTSKETxxxxxxxxxxxxxxxxxxxxxVTDLTSQLNEKHCQLLDxxxxxxxxxxxxxxxxxxxxxxxxxxxxSSSVTSLQSELSEMHELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEExxxxxxxxxxxxxxxxxxxxxNRVLFHENNSLIAQSEEYKSRAETMADNYGEHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVISxxxxxxxxxxxxxxxxxxxxxxxxxxxxTEEFRNLSIHLKELKDKADAECLKLHEKRESEGLPTGMQESLRIAFIKEQCETKVQELKHHLSISxxxxxxxxxxxxxxxxxxxxxKKSEAAHLKKxxxxxxxxxxxxxxxxxxxxxxxxxxxxYDLAKAELECSLMSxxxxxxxxxxxxxxxxxxxxxKSRLYSDLSLMKKLLYSSTFPCRKEGNDGLHKESCISNELTGRNVQKTTNADTKSHGRMSADDTGNGPTGDVDEYLEHENMTNGIDAQNLCLGLSDEGSYSCTLMKEHPEQDVLQSSCLNGSSSLALVNQENTKSNDTKDLAIINDQFRVQSLKSSMDLLNEEVRVWCNVREV

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1852
255545606		1998	ATP binding protein, putative [Ricinus c	0.946	0.877	0.543	0.0
15219189		1999	uncharacterized protein [Arabidopsis tha	0.942	0.873	0.451	0.0
297850656		2000	hypothetical protein ARALYDRAFT_889705 [	0.941	0.872	0.447	0.0
9280691		1970	F2E2.13 [Arabidopsis thaliana]	0.927	0.871	0.446	0.0
224063185		1566	predicted protein [Populus trichocarpa]	0.766	0.906	0.523	0.0
302141905		1038	unnamed protein product [Vitis vinifera]	0.507	0.905	0.602	0.0
356510227		1986	PREDICTED: uncharacterized protein LOC10	0.672	0.626	0.507	0.0
224084748		1011	predicted protein [Populus trichocarpa]	0.492	0.903	0.478	0.0
218184385		1899	hypothetical protein OsI_33230 [Oryza sa	0.597	0.582	0.387	0.0
222612696		1899	hypothetical protein OsJ_31239 [Oryza sa	0.597	0.582	0.386	0.0

>gi\|255545606\|ref\|XP_002513863.1\| ATP binding protein, putative [Ricinus communis] gi\|223546949\|gb\|EEF48446.1\| ATP binding protein, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1801 bits (4664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1042/1916 (54%), Positives = 1348/1916 (70%), Gaps = 163/1916 (8%)

Query: 1    MSRVARWKVEKTKVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGT 60
            MSR+ +WK+EKTKVKVVFRLQFHATHI   GWDKLFISFIPADSGK   KTTKA+VRNGT
Sbjct: 1    MSRITKWKLEKTKVKVVFRLQFHATHIPLVGWDKLFISFIPADSGKVTSKTTKASVRNGT 60

Query: 61   CKWADPIYETTRLLQDIKTKQYDEKLYKFVVAMGSSRSSILGEATINLADYADASKPSTV 120
            CKWADPIYETTRLLQDIKTKQYDEKLYK V+AMGSSRSSILGEATINLA YADA KP  +
Sbjct: 61   CKWADPIYETTRLLQDIKTKQYDEKLYKLVIAMGSSRSSILGEATINLAHYADALKPFVI 120

Query: 121  LLPLHGGDSGTILHVTVQLLTSKTGFREFEQQRELRERGLQSGNDQISPDQSCG------ 174
             LPLHG DSGTILHVTVQLLTSKTGFREFEQQRELRERGLQ+  DQ SPD+S G      
Sbjct: 121  ALPLHGCDSGTILHVTVQLLTSKTGFREFEQQRELRERGLQT--DQHSPDESSGRKVSSS 178

Query: 175  --GINNQLDK---VNARVRFKDKSKELPSLEEEAGLNEDYTESAVGFDGSSNTSESLYAE 229
               I  Q+DK    + RV+F++KSK+L SLEEE    ++Y +S VGFDGSSNTSESLYAE
Sbjct: 179  VETITEQIDKDHKAHTRVKFREKSKDLSSLEEEVVPTDEYADSGVGFDGSSNTSESLYAE 238

Query: 230  KHDASSTHEIDSLKSIVSGDLAGLN--QSLQQEKGDPSDQRFSAQGTNDWVPGWGLDYSA 287
            KH+ SSTHEIDSL+S VSGDLAG++  QS Q EKGDP D RFS QGTNDWV GW  DYS 
Sbjct: 239  KHETSSTHEIDSLRSTVSGDLAGISPSQSPQLEKGDPPDNRFSVQGTNDWVQGWSSDYSV 298

Query: 288  DNDLAIAHEENNRLRGCLEMAESSIHELKLEVSSLQSHADEIGMEAQNFAQKLAAEIASG 347
            DNDLA A+EEN+RLRG LE AESSIHELK+EVSSLQ+HADEIG EAQ FA++LAAEIASG
Sbjct: 299  DNDLAAAYEENSRLRGSLEAAESSIHELKMEVSSLQNHADEIGHEAQKFAKELAAEIASG 358

Query: 348  EQLAEEV-------SALKSECSHLK--------------------------------SDL 368
            E L  EV       S LK +   LK                                 D 
Sbjct: 359  EDLVNEVSVLKSECSKLKDDLEQLKISKLCPSFIDREAFGAEQDQISLRWLKGLLAMEDK 418

Query: 369  ERLIKLRSCHPFTS----------------WEAVKQGTEITMSTPNLVTCDRSKVNEIGE 412
             R ++ ++C  +                   + +KQG+ +T+S+PNL+  + + + EI E
Sbjct: 419  IRELQNKACLGYNERDLRIFQSDIEALLDVLQNLKQGSGLTVSSPNLILSEGASLKEIRE 478

Query: 413  ISLNKYEQYLSGTGLETELYQPDLDMLHCVGIPALASHEHSSVNPADSVGGKIFELLREL 472
            +S  K  Q+ +GTG + +LYQP+  MLHC+ IP L SHE  +V+  +++  KIFELLREL
Sbjct: 479  MSPYKNGQFATGTGFDVDLYQPE-GMLHCLNIPNLISHESDTVDTTNAMKNKIFELLREL 537

Query: 473  DESKAERESLAKKMDQMECYYEALIQELEENQRHMLGELQNLRNEHSSCLYTVSSAKAEI 532
            D+SKAERESLAKKMDQMECYYEAL+QELEENQR +L ELQNLRNEHS+CLY +SS KA++
Sbjct: 538  DDSKAERESLAKKMDQMECYYEALVQELEENQRQLLQELQNLRNEHSTCLYAISSTKADM 597

Query: 533  EAMRLDVDEQVLRFSEERRDLESLNKELERRAVSAEAALKRARLNYSIAVNQLQKDLELL 592
            E+M   ++EQ+LR + ++ D+ES NKELERRA++AEAALKRARLNYSIAV+QLQKDLELL
Sbjct: 598  ESMHQGLNEQILRLAGDKHDMESFNKELERRALTAEAALKRARLNYSIAVDQLQKDLELL 657

Query: 593  SSQVLSMYQTNENLIKQAFVDSPQPTCQEYQDMVQNRKLNPEESHANRHLACQDQYIGVK 652
            S QVLSMY++NENLI+QAFVDS  P          +R  +  E +A + L  ++Q  G++
Sbjct: 658  SFQVLSMYESNENLIRQAFVDSSPPN---------SRGCDSGE-YAVKLLQFENQSAGIR 707

Query: 653  KQHLGGDILIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEIR 712
            KQ LGGDI +++LKRSL+LQEGLYRKVEEE CE+  VNIYLDV SK LQ+TL+ A  +++
Sbjct: 708  KQQLGGDIHLDELKRSLHLQEGLYRKVEEEVCEMHFVNIYLDVLSKALQETLVGACEDVQ 767

Query: 713  LMKERMDELSHQLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLES 772
             +KE+++EL+ QLEL   S +LL+Q+LQ AM+++H LNEYKA+CIAKCNDMAL+NQ L +
Sbjct: 768  HLKEKVNELTQQLELLGNSKQLLIQKLQIAMDEVHSLNEYKAACIAKCNDMALENQTLGA 827

Query: 773  NLQDVTCENRHLTQKLSEWESLMMDFKSFQSKYEAIAAEKTELANLLEKESLENGNLRRE 832
            +LQ+++ EN  L QK++EW+S++++++ ++ K EA AAE  EL  LLEK++LE G L+ E
Sbjct: 828  DLQNMSHENHLLMQKIAEWKSMVIEYRGYEEKLEAYAAENGELTCLLEKKTLEIGILQNE 887

Query: 833  TSLLQKELETVKIDFDELASVNKNLQRTINNLQNKMHDMLSSYGESFSELCLHNKSADQN 892
               LQ EL+T+KI+F ELAS N+NLQ  +N+LQNK+ ++L SY +S  E+ L ++S+ Q+
Sbjct: 888  NISLQDELKTIKIEFAELASGNENLQNFVNSLQNKLQNLLLSYDKSIIEIHLVSESSSQD 947

Query: 893  LESKDLTSVIMRLEVLQRNACQKIRQLMQEKKALIDEKDRAEMSFSKSESDIVLVKQKFE 952
            L++KDL  ++M+LE LQ NAC KI QL++EKK L+ EKD A++S + +ESD   +K KFE
Sbjct: 948  LQNKDLPGLLMQLEELQHNACNKILQLVEEKKYLMHEKDVAQLSITAAESDTASMKWKFE 1007

Query: 953  HDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVSSEVEENNAQRHTDLFSDLDYLEVELQ 1012
            H++RNM++K   SN LLQKLQL  EA A++L VSSE+EE  AQ+  +LFS +D LEVELQ
Sbjct: 1008 HEIRNMVEKLDKSNVLLQKLQLDVEAFANRLGVSSELEEKYAQQQNELFSGIDQLEVELQ 1067

Query: 1013 QLSSKNRDLAQEILALQVVTEEFDRSKQTISELTEENRALMVALQDKSEESVKLALEVDS 1072
            +L+SKNRDLA EI+AL+           T +ELT+EN+AL V LQDK+EES KL+ E+ S
Sbjct: 1068 ELTSKNRDLANEIIALET---------GTAAELTKENQALTVYLQDKNEESSKLSSELKS 1118

Query: 1073 FKQSFQSLHDE-LLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQKTAVLTK 1131
             K+S QSL+DE + +  S  D ++      ++QL++      + D  KS L      L  
Sbjct: 1119 LKESLQSLYDENMALIASSHDKMEK-----SAQLAS------EVDGLKSSL----QSLRD 1163

Query: 1132 ENQDLMVSLQNKSEEAAKLAVELDSVRNSLQSVHDELHGERSLSDELKSRAIDISSQLNE 1191
            ENQ LMV+ Q+K+ EAAKL +EL+S++ +LQSV+DE      +S +       ++S+LN 
Sbjct: 1164 ENQALMVASQDKAAEAAKLELELNSLKGNLQSVNDENQALMVISRDKTEECAKLASELNN 1223

Query: 1192 KQQQLIDFDQQNSEMIQKIAELTSENQALMVSLQEYAEESSRLASEGNTSKETLQSLRDE 1251
             ++ L                L  + +AL++   +  +ES++ A E N  +E+LQSL ++
Sbjct: 1224 LKESL--------------QSLHDDKKALVL---DKKDESAQFAGELNCLRESLQSLHNQ 1266

Query: 1252 LQSERSLRDELKNVVTDLTSQLNEKHCQLLDLDQQKSELVQLKLLVLDL----ESEKSRA 1307
            L  ERSLR+ L++ VTD  S+LNEK  Q+L L++  S+L    L V  L    E     A
Sbjct: 1267 LHGERSLREGLESKVTDQISKLNEKEYQVLRLNKSVSDLESENLRVCSLLSHYEDSLKIA 1326

Query: 1308 SEESSSVTSLQSELSEMHELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKN 1367
             EE SS+  L+ EL +M ELL+A DV LIFT+TQYE    ELV Q+ ++D  L EL  K+
Sbjct: 1327 REECSSIPDLKIELCKMDELLIATDVSLIFTKTQYENKAAELVLQLRASDTYLDELQKKH 1386

Query: 1368 VDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSAIAENRVLFHENNSLIAQSEEYK 1427
            ++VET LN CLA EA+  EENA+LL SL+++RSEL+++IAENR+L   N    A+ EEYK
Sbjct: 1387 IEVETTLNRCLANEAEYTEENAKLLASLNSMRSELEASIAENRLLVEANRVTTAELEEYK 1446

Query: 1428 SRAETMADNYGEHKSQLALEVERMKQLLVGSEEEIDDLMMSREELEIKVVVLKAKLAEQH 1487
              A  +  N  E + Q +L VER+K LLV SEEEID+L++S+EELE+KV+VLKAKL E+ 
Sbjct: 1447 DWARDVRLN-CEDQRQHSLVVERLKHLLVSSEEEIDNLVLSKEELEVKVLVLKAKLDEEQ 1505

Query: 1488 AQVISSEGYIDEQKMLQNQCNELRRKLSEQILKTEEFRNLSIHLKELKDKADAECLKLHE 1547
            AQ+ + E Y+DE  +L+ Q NEL ++L++QILKTEEFRNLSIHLKELKDKA+AEC+   E
Sbjct: 1506 AQITTMERYLDELMILKKQYNELSQRLADQILKTEEFRNLSIHLKELKDKAEAECVHARE 1565

Query: 1548 KRESEGLPTGMQESLRIAFIKEQCETKVQELKHHLSISKKHSEEMLWKLQDAIDEIENRK 1607
            K+++E  P  MQESLRIAFIKEQ ET++QELK  LSISKKHSEEMLWKLQDAIDE +N K
Sbjct: 1566 KKDTEA-PVAMQESLRIAFIKEQYETRLQELKQQLSISKKHSEEMLWKLQDAIDENDNMK 1624

Query: 1608 KSEAAHLKKNEELGVKILELEAELQSLISDKREKTKAYDLAKAELECSLMSLECCKEEKE 1667
            KSEA HLKKNEELGVKILELEAELQ+++SDKRE+  AYDL KAE+ECSL+SLECCKEEK+
Sbjct: 1625 KSEACHLKKNEELGVKILELEAELQAVLSDKRERMNAYDLMKAEMECSLISLECCKEEKQ 1684

Query: 1668 KLEVSLHECNEEKSRLYSDLSLMKKLLYSSTFPCRKEGNDGLHKESCISNELTGRNVQKT 1727
            KLE SL ECNEEKS+L  +++ MK+LL +S                      + RN+++ 
Sbjct: 1685 KLEASLQECNEEKSKLAVEIAQMKELLENSK---------------------SARNIKEK 1723

Query: 1728 TNADTKSHGRMSADDTGNGPTGDVDEYLEHENMTNGIDAQNLCLGLSDEGSYSCTLMKEH 1787
             N ++     + +D              +++ +   +    + L  + +G  S  L   H
Sbjct: 1724 GNCESCRVDSIFSDICD-----------KNQKILKFLPPCTVILN-TLKGFVSKYLFALH 1771

Query: 1788 PEQDVLQSSCLNGSSSLALVNQENTKSNDTKDLAIINDQFRVQSLKSSMDLLNEEV 1843
              QD L SS +NG  S  L+N E    +D K LA+IND FR ++LKSSMD LN E+
Sbjct: 1772 G-QDALLSSGVNGVQSSMLLNDERFLHSDMKQLALINDHFRAENLKSSMDHLNNEL 1826

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|15219189\|ref\|NP_173625.1\| uncharacterized protein [Arabidopsis thaliana] gi\|332192069\|gb\|AEE30190.1\| uncharacterized protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297850656\|ref\|XP_002893209.1\| hypothetical protein ARALYDRAFT_889705 [Arabidopsis lyrata subsp. lyrata] gi\|297339051\|gb\|EFH69468.1\| hypothetical protein ARALYDRAFT_889705 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|9280691\|gb\|AAF86560.1\|AC069252_19 F2E2.13 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|224063185\|ref\|XP_002301031.1\| predicted protein [Populus trichocarpa] gi\|222842757\|gb\|EEE80304.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|302141905\|emb\|CBI19108.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356510227\|ref\|XP_003523841.1\| PREDICTED: uncharacterized protein LOC100814687 [Glycine max]	Back alignment and taxonomy information

>gi\|224084748\|ref\|XP_002307399.1\| predicted protein [Populus trichocarpa] gi\|222856848\|gb\|EEE94395.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|218184385\|gb\|EEC66812.1\| hypothetical protein OsI_33230 [Oryza sativa Indica Group]	Back alignment and taxonomy information

>gi\|222612696\|gb\|EEE50828.1\| hypothetical protein OsJ_31239 [Oryza sativa Japonica Group]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1852
TAIR\|locus:2030541		1999	AT1G22060 [Arabidopsis thalian	0.515	0.477	0.399	2.1e-180
TAIR\|locus:2145141		853	AT5G52280 "AT5G52280" [Arabido	0.443	0.963	0.227	4.4e-44
TAIR\|locus:2038446		1029	AT1G63300 "AT1G63300" [Arabido	0.529	0.952	0.221	3.4e-37
ZFIN\|ZDB-GENE-060929-860		2690	cenpe "centromere protein E" [	0.700	0.482	0.215	6.6e-35
TAIR\|locus:2162996		983	AT5G41140 "AT5G41140" [Arabido	0.495	0.933	0.200	7.3e-35
UNIPROTKB\|E1BRE5		1411	EEA1 "Uncharacterized protein"	0.556	0.729	0.207	8.4e-26
UNIPROTKB\|F1NMQ0		2150	GOLGA4 "Uncharacterized protei	0.501	0.432	0.218	9.5e-34
UNIPROTKB\|F1NI68		2142	GOLGA4 "Uncharacterized protei	0.501	0.433	0.218	1.5e-33
DICTYBASE\|DDB_G0290503		1492	DDB_G0290503 [Dictyostelium di	0.589	0.731	0.207	1.9e-33
UNIPROTKB\|Q3V6T2		1871	CCDC88A "Girdin" [Homo sapiens	0.492	0.487	0.204	3e-33

TAIR\|locus:2030541 AT1G22060 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1641 (582.7 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
 Identities = 403/1009 (39%), Positives = 606/1009 (60%)

Query:   305 LEMAESSIHELKLEVSSLQ---SHADEIGMEAQNFAQKLAAEIASGEQLAEE-VSALKSE 360
             + + +S   +LK E+  L+   SH      +  N    L      G  + E+ +  ++++
Sbjct:   349 VSVLKSECSKLKEEMERLRNVKSHVLFNSKDQDNVPHSLQLRWLQGLLVVEDNIREIQNK 408

Query:   361 CSHLKSDLERLIKLRSCHPFTSWEAVKQG--TEITMSTPNLVTCDRSKV--NEIGEISLN 416
               +   D +  + L     F S   V Q   T+I     +  T    K+   +  E  L+
Sbjct:   409 VCYGYHDRDLRLFLSD---FESLLGVLQDFKTQIEQPISHFSTVPSEKIIMTDSKERGLS 465

Query:   417 KYEQYLSGTGLETELYQPDLDMLHCVGIPALASHEHSSVNPADSVGGKIFELLRELDESK 476
             K + ++SG+ ++T++YQP+LD L  +G+P L S E +S +   ++  KI EL+R LDESK
Sbjct:   466 KAKHFVSGSEVDTDIYQPELDPLQYLGMPDLTSREPNSADSVSAMRDKILELVRGLDESK 525

Query:   477 AERESLAKKMDQMECYYEALIQELEENQRHMLGELQNLRNEHSSCLYTVSSAKAEIEAMR 536
             AER+SL KKMDQMECYYE+L+QELEE QR +L ELQ+LR EHS+CLY++S AKAE+E +R
Sbjct:   526 AERDSLTKKMDQMECYYESLVQELEETQRQLLVELQSLRTEHSTCLYSISGAKAEMETLR 585

Query:   537 LDVDEQVLRFSEERRDLESLNKELERRAVSAEAALKRARLNYSIAVNQLQKDLELLSSQV 596
              D++EQ LRFSEE++ L+S N+EL++RA++AEAALKRARLNYSIAVN LQKDLELLSSQV
Sbjct:   586 HDMNEQTLRFSEEKKTLDSFNEELDKRAMAAEAALKRARLNYSIAVNHLQKDLELLSSQV 645

Query:   597 LSMYQTNENLIKQAFVDSPQPTCQEYQDMVQNRKLNPEESHANRHLAC---QDQYIGVKK 653
             +SM++TNENLIKQAF   P+P  Q + + +Q+   +  E    R +     Q++  G+K+
Sbjct:   646 VSMFETNENLIKQAF---PEPP-QSFHECIQSTDDSISEKQDTRDVKLIQFQNEKKGMKE 701

Query:   654 QHLGGDI-LIEDLKRSLYLQEGLYRKVEEEACELLSVNIYLDVFSKTLQKTLLEASGEIR 712
             + L GDI L+ED+KRSL++QE LY+KVEEE  E+ S N+YL+VFS  L++T LEAS +IR
Sbjct:   702 RPLKGDIILLEDMKRSLHVQESLYQKVEEELYEMHSRNLYLEVFSNILRETFLEASVDIR 761

Query:   713 LMKERMDELSHQLELSTESNELLMQRLQTAMNDIHFLNEYKASCIAKCNDMALQNQLLES 772
             +MK ++DEL  QLELSTE+ E+L QRL   ++++  L E K +CIAK N +ALQNQ LE+
Sbjct:   762 IMKAKIDELGWQLELSTEAKEILKQRLDITLDEVCSLKEEKTTCIAKWNAVALQNQSLEA 821

Query:   773 NLQDVTCENRHLTQKLSEWESLMMDFKSFQSKYEAIAAEKTELANLLEKESLENGNLRRE 832
             NLQ++T EN  L QK+ E ES++++ KS+++ YE    EK ELA L+EKE++E  + R  
Sbjct:   822 NLQNITHENLILLQKIDELESVVLESKSWKTNYETCICEKKELAELMEKEAVEKAHYRTR 881

Query:   833 TSLLQKELETVKIDFDELASVNKNLQRTINNLQNKMHDMLSSYGESFSELCLHNKSADQN 892
              + +Q E + V+  FD+LA+ N NLQ+ +++L +K+ + L  Y E    L    +  D +
Sbjct:   882 LATVQAEFDAVRGKFDDLATANGNLQQNLSSLTDKLINTLGCYNEKLVSLPQW-EGVDLD 940

Query:   893 LESKDLTSVIMRLEVLQRNACQKIRQLMQEKKALIDEKDRAEMSFSKSESDIVLVKQKFE 952
              ES DLT    +L+      C+K   L+ E   L+ EK   E     +ESD++ +KQ  E
Sbjct:   941 FESHDLTE---QLDKFLCKICEKCFVLISENNGLMKEKSMTESYLRAAESDVMELKQMHE 997

Query:   953 HDLRNMIDKQSVSNALLQKLQLRFEAVADKLKVSSEVEENNAQRHTDLFSDLDYLEVELQ 1012
             +D++ M+ K   S ALL++LQL  E+V DK+KV +E E+N   RH DL S LD+ E E+ 
Sbjct:   998 NDVQCMVTKLEASTALLRRLQLETESVMDKMKVITEDEQNYESRHLDLLSRLDHFENEMH 1057

Query:  1013 QLSSKNRDLAQEILALQVVTEEFDRSKQTISELTEENRALMVALQDKSEESVKLALEVDS 1072
              L SKN  L QEI  L  V  E  R+K  + EL EE + ++V+LQDKS+E++ L  E+++
Sbjct:  1058 LLVSKNEGLGQEISELSSVAVEHGRTKLLVEELAEEKKRVLVSLQDKSQETLGLVRELEN 1117

Query:  1073 FKQSFQSLHDELLVERSLRDDLKSAVSDITSQLSAKHSQLLDFDQQKSELIQ-KTAV--- 1128
              K++F   H EL +ER+LR +L+  + D+TS++ AK S+L+ FD+Q SEL++ K  V   
Sbjct:  1118 LKKTFD--H-ELRLERNLRQELEIKMQDLTSEVIAKSSKLMSFDEQSSELVRLKQMVSDL 1174

Query:  1129 ----------LTKENQDLMVSLQNKSEEAAKLAVEL-----DSVRNSLQSVHDELHGERS 1173
                       LT+    L  SL   S   + L  ++      SV   +Q V      E +
Sbjct:  1175 ELEKATHTHRLTRYETSLR-SLTRDSSYISDLESQILEMMEISVAADIQIVFTRTEWE-T 1232

Query:  1174 LSDELKSRAIDISSQLNEKQQQLIDFDQQNSEMIQKIAELTSENQALMVSLQEYAEESSR 1233
              +D+L     ++ +  N+ +   +     N+  I+ +A+L S    L +  +       R
Sbjct:  1233 YADKLHKDHFEVLTAFNDSRN--VGAQHMNAN-IKLLADLDSLKSELKIE-RNLRNNLDR 1288

Query:  1234 LASEGNTSKETLQSLRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLD 1282
                E  +  +    L +    ++S  + L+ +V +L S   EK  Q L+
Sbjct:  1289 RVEELTSELDEKHLLLENFDLQKSQVELLEKMVAELES---EKSFQRLE 1334

GO:0005737 "cytoplasm" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR\|locus:2145141 AT5G52280 "AT5G52280" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2038446 AT1G63300 "AT1G63300" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-060929-860 cenpe "centromere protein E" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

TAIR\|locus:2162996 AT5G41140 "AT5G41140" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BRE5 EEA1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NMQ0 GOLGA4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NI68 GOLGA4 "Uncharacterized protein" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0290503 DDB_G0290503 [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|Q3V6T2 CCDC88A "Girdin" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1852
pfam10358		142	pfam10358, NT-C2, N-terminal C2 in EEIG1 and EHBP1	2e-24
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	6e-16
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-14
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	5e-14
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-12
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	3e-11
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	3e-10
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	2e-08
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	1e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-07
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	1e-07
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	2e-07
TIGR00606		1311	TIGR00606, rad50, rad50	2e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	5e-07
TIGR00618		1042	TIGR00618, sbcc, exonuclease SbcC	1e-06
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	2e-06
pfam12128		1198	pfam12128, DUF3584, Protein of unknown function (D	3e-06
pfam05483		787	pfam05483, SCP-1, Synaptonemal complex protein 1 (	3e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	6e-06
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	8e-06
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	9e-06
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	1e-05
pfam01576		859	pfam01576, Myosin_tail_1, Myosin tail	1e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	2e-05
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	2e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	3e-05
pfam01576		859	pfam01576, Myosin_tail_1, Myosin tail	3e-05
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	6e-05
pfam02463		1162	pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	7e-05
pfam12128		1198	pfam12128, DUF3584, Protein of unknown function (D	1e-04
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	2e-04
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	3e-04
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	3e-04
PHA02562		562	PHA02562, 46, endonuclease subunit; Provisional	3e-04
pfam10186		307	pfam10186, Atg14, UV radiation resistance protein	4e-04
PLN02939		977	PLN02939, PLN02939, transferase, transferring glyc	5e-04
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	7e-04
COG3206		458	COG3206, GumC, Uncharacterized protein involved in	7e-04
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	0.001
TIGR02169		1164	TIGR02169, SMC_prok_A, chromosome segregation prot	0.001
pfam12128		1198	pfam12128, DUF3584, Protein of unknown function (D	0.001
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	0.001
PRK02224		880	PRK02224, PRK02224, chromosome segregation protein	0.001
TIGR04211		198	TIGR04211, SH3_and_anchor, SH3 domain protein	0.001
TIGR02168		1179	TIGR02168, SMC_prok_B, chromosome segregation prot	0.002
COG0419		908	COG0419, SbcC, ATPase involved in DNA repair [DNA	0.002
pfam09726		680	pfam09726, Macoilin, Transmembrane protein	0.002

>gnl\|CDD\|220715 pfam10358, NT-C2, N-terminal C2 in EEIG1 and EHBP1 proteins	Back alignment and domain information

 Score =  100 bits (250), Expect = 2e-24
 Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 3/131 (2%)

Query: 13  KVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTR 72
           KVK  F L  H          +LF+ +   D     G T+KA V NG   W +       
Sbjct: 4   KVKFQFDLSIHELQNVPLVNGELFVKWKRGDKKGNSGTTSKALVNNGRAVWNEEFSIPCT 63

Query: 73  LLQDIKTKQYDEKLYKFVVAM--GSSRSSILGEATINLADYADASKPSTV-LLPLHGGDS 129
           L  D K  +++ KL  FVV       +  +LG+A I+LA+YA++ +P+T  LL       
Sbjct: 64  LFVDKKGGKFEPKLLTFVVYKVTKKGKKKVLGKADIDLAEYANSKEPTTRRLLLKKCSKK 123

Query: 130 GTILHVTVQLL 140
              L +T+ LL
Sbjct: 124 NATLSITISLL 134

This version of the C2 domain was initally identified in the vertebrate estrogen early-induced gene 1 (EEIG1), and its Drosophila ortholog required for uptake of dsRNA via the endocytotic machinery to induce RNAi silencing. It is also in C.elegans ortholog Sym-3 (SYnthetic lethal with Mec-3) and the mammalian protein EHBP1 (EH domain Binding Protein-1) that regulates endocytotic recycling and two plant proteins, RPG that regulates Rhizobium-directed polar growth and PMI1 (Plastid Movement Impaired 1) that is essential for intracellular movement of chloroplasts in response to blue light. Length = 142

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|129694 TIGR00606, rad50, rad50	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|129705 TIGR00618, sbcc, exonuclease SbcC	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584)	Back alignment and domain information

>gnl\|CDD\|114219 pfam05483, SCP-1, Synaptonemal complex protein 1 (SCP-1)	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|144972 pfam01576, Myosin_tail_1, Myosin tail	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|144972 pfam01576, Myosin_tail_1, Myosin tail	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain	Back alignment and domain information

>gnl\|CDD\|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584)	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|222878 PHA02562, 46, endonuclease subunit; Provisional	Back alignment and domain information

>gnl\|CDD\|220623 pfam10186, Atg14, UV radiation resistance protein and autophagy-related subunit 14	Back alignment and domain information

>gnl\|CDD\|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|225747 COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>gnl\|CDD\|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584)	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional	Back alignment and domain information

>gnl\|CDD\|234501 TIGR04211, SH3_and_anchor, SH3 domain protein	Back alignment and domain information

>gnl\|CDD\|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>gnl\|CDD\|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>gnl\|CDD\|220365 pfam09726, Macoilin, Transmembrane protein	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1852
PF10358		143	NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins;	99.75
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	99.74
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	99.67
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	99.59
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	99.5
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	99.46
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	99.43
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	99.28
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	99.18
PRK02224		880	chromosome segregation protein; Provisional	99.05
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	98.97
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	98.88
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	98.85
PRK02224		880	chromosome segregation protein; Provisional	98.82
PRK03918		880	chromosome segregation protein; Provisional	98.79
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	98.48
PRK03918		880	chromosome segregation protein; Provisional	98.36
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	98.28
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	98.22
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	98.15
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	98.08
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	98.01
KOG0996		1293	consensus Structural maintenance of chromosome pro	97.96
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	97.85
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	97.8
PF01576		859	Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu	97.75
PF00038		312	Filament: Intermediate filament protein; InterPro:	97.69
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	97.67
PF00038		312	Filament: Intermediate filament protein; InterPro:	97.53
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	97.33
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	97.3
PRK01156		895	chromosome segregation protein; Provisional	97.28
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	97.22
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	97.2
KOG4673		961	consensus Transcription factor TMF, TATA element m	97.15
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	97.12
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	97.12
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	97.08
KOG0978		698	consensus E3 ubiquitin ligase involved in syntaxin	97.02
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	96.98
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	96.98
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	96.94
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	96.55
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	96.44
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	96.32
PHA02562		562	46 endonuclease subunit; Provisional	96.26
PRK01156		895	chromosome segregation protein; Provisional	96.2
KOG0996		1293	consensus Structural maintenance of chromosome pro	96.06
COG0419		908	SbcC ATPase involved in DNA repair [DNA replicatio	96.01
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	95.84
PRK04778		569	septation ring formation regulator EzrA; Provision	95.75
PF05557		722	MAD: Mitotic checkpoint protein; InterPro: IPR0086	95.6
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	95.41
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	95.36
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	95.32
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	95.3
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	95.05
PRK04778		569	septation ring formation regulator EzrA; Provision	95.04
KOG0971		1243	consensus Microtubule-associated protein dynactin	94.92
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	94.74
PHA02562		562	46 endonuclease subunit; Provisional	94.31
PRK11637		428	AmiB activator; Provisional	94.19
KOG4673		961	consensus Transcription factor TMF, TATA element m	93.99
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	93.88
PRK04863		1486	mukB cell division protein MukB; Provisional	93.53
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	93.53
PRK11637		428	AmiB activator; Provisional	93.51
PF14662		193	CCDC155: Coiled-coil region of CCDC155	93.49
PF06160		560	EzrA: Septation ring formation regulator, EzrA ; I	92.75
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	92.34
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	92.05
PRK04863		1486	mukB cell division protein MukB; Provisional	92.01
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	91.42
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	90.97
PF13514		1111	AAA_27: AAA domain	90.73
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	90.61
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	89.69
PF09789		319	DUF2353: Uncharacterized coiled-coil protein (DUF2	88.98
KOG0971		1243	consensus Microtubule-associated protein dynactin	88.8
PF09789		319	DUF2353: Uncharacterized coiled-coil protein (DUF2	87.86
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	87.76
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	87.53
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	87.41
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	87.16
cd08389		124	C2A_Synaptotagmin-14_16 C2A domain first repeat pr	87.01
PF14662		193	CCDC155: Coiled-coil region of CCDC155	86.58
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	86.55
KOG0963		629	consensus Transcription factor/CCAAT displacement	85.71
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	85.68
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	85.16
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	85.15
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	84.93
PRK09039		343	hypothetical protein; Validated	84.82
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	84.78
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	84.4
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	84.03
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	83.29
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	82.65
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	82.56
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	82.52
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	82.31
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	81.89
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	81.45
KOG0962		1294	consensus DNA repair protein RAD50, ABC-type ATPas	81.16
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	81.15
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	80.25
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	80.07

>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []	Back alignment and domain information

Probab=99.75  E-value=1.6e-18  Score=173.05  Aligned_cols=134  Identities=32%  Similarity=0.503  Sum_probs=124.4

Q ss_pred             ccceeEEEEEeeeecccccccccceEEEEeecCCCccccccccccccCCcccCCcccchhhhhccccchhcchhhhhhhh
Q 000211           11 KTKVKVVFRLQFHATHIQQTGWDKLFISFIPADSGKAIGKTTKANVRNGTCKWADPIYETTRLLQDIKTKQYDEKLYKFV   90 (1852)
Q Consensus        11 K~k~K~vFklqFhAtqVp~~gwd~L~vSiVp~D~GK~taKt~Ka~Vr~G~C~W~dpiyEtvkl~qD~kt~~~~ekiYkfV   90 (1852)
                      |.+.|+.|.|.+|..+..+..|..++|++-.++.+++.+.|.++.|.+|.|.|++++..++++..|.+++.|++|.|+|+
T Consensus         2 ~~~~kf~~~l~i~~l~~~p~~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~~K~~~~~   81 (143)
T PF10358_consen    2 KKAVKFQFDLTIHELENLPSSNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQPKELKFS   81 (143)
T ss_pred             CceeeEEEEEEEEEeECcCCCCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEeeEEEEEE
Confidence            67899999999888876667999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcC--CCcccccceeecchhhccccc-CCeeeeecCCCC-CCCCeEEEEEeeeccCC
Q 000211           91 VAMG--SSRSSILGEATINLADYADAS-KPSTVLLPLHGG-DSGTILHVTVQLLTSKT  144 (1852)
Q Consensus        91 Vs~G--SsksgiLGEasinlAdY~~a~-kp~~VSLPLk~c-nsGtvLHVtIQ~l~~~t  144 (1852)
                      |-.+  +.+...||.++||||+|++.. +|.++.+||+.| .++|+|+|+|++..-++
T Consensus        82 v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~~~~~a~L~isi~~~~~~~  139 (143)
T PF10358_consen   82 VFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKCKKSNATLSISISLSELRE  139 (143)
T ss_pred             EEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccCCCCCcEEEEEEEEEECcc
Confidence            9775  666689999999999999996 999999999999 99999999999996543

Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF13514 AAA_27: AAA domain	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair]	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1852
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	1e-20
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	7e-19
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	5e-14
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	1e-13
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	4e-12
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	1e-11
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	2e-10
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	6e-10
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	2e-06
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	2e-04
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-19
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-19
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-18
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-17
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-15
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-08
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-07
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-07
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	4e-06
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	5e-06
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	7e-06
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	4e-05
2dfs_A		1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	5e-04
1sjj_A		863	Actinin; 3-helix bundle, calponin homology domain,	4e-06
1c1g_A		284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	6e-04
1g8x_A		1010	Myosin II heavy chain fused to alpha-actinin 3; mo	9e-04

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

 Score = 98.8 bits (246), Expect = 1e-20
 Identities = 58/322 (18%), Positives = 129/322 (40%), Gaps = 11/322 (3%)

Query: 994  AQRHTDLFSDLDYLEVELQQLSSKNRDLAQEILALQV-----------VTEEFDRSKQTI 1042
             +            E EL++L  K+  L +E   LQ              E   R     
Sbjct: 863  DEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELYAEAEEMRVRLAAKK 922

Query: 1043 SELTEENRALMVALQDKSEESVKLALEVDSFKQSFQSLHDELLVERSLRDDLKSAVSDIT 1102
             EL E    +   ++++ E S +L  E    +Q    L ++L  E + R  L+       
Sbjct: 923  QELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTAD 982

Query: 1103 SQLSAKHSQLLDFDQQKSELIQKTAVLTKENQDLMVSLQNKSEEAAKLAVELDSVRNSLQ 1162
             ++      +L  + Q ++L ++  +L +   DL  +L  + E+A  L    +   + + 
Sbjct: 983  GKIKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMIS 1042

Query: 1163 SVHDELHGERSLSDELKSRAIDISSQLNEKQQQLIDFDQQNSEMIQKIAELTSENQALMV 1222
             +   L  E     EL+     +  + ++  +Q+ +   Q +E+  ++A+   E QA + 
Sbjct: 1043 ELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALA 1102

Query: 1223 SLQEYAEESSRLASEGNTSKETLQSLRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLD 1282
             L++   + +    +    +  +  L+++L+SE++ R++ +    DL+ +L     +L D
Sbjct: 1103 RLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELEALKTELED 1162

Query: 1283 LDQQKSELVQLKLLVLDLESEK 1304
                 +   +L+      + +K
Sbjct: 1163 TLDTTATQQELRGSDYKDDDDK 1184

PyMOL of 1i84

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080	Back alignment and structure

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863	Back alignment and structure

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284	Back alignment and structure

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		1852
1c1g_A		284	Tropomyosin; contractIle protein; 7.00A {Sus scrof	97.62
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	97.41
1i84_S		1184	Smooth muscle myosin heavy chain; muscle protein,	97.22
3ol1_A		119	Vimentin; structural genomics, PSI-2, protein stru	88.97
3na7_A		256	HP0958; flagellar biogenesis, flagellum export, C4	87.14
3swk_A		86	Vimentin; cytoskeleton, intermediate filament, alp	85.64
2v71_A		189	Nuclear distribution protein NUDE-like 1; developm	85.25
3na7_A		256	HP0958; flagellar biogenesis, flagellum export, C4	82.21
3ol1_A		119	Vimentin; structural genomics, PSI-2, protein stru	80.08

>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A	Back alignment and structure

Probab=97.62  E-value=0.08  Score=54.54  Aligned_cols=12  Identities=8%  Similarity=0.221  Sum_probs=4.6

Q ss_pred             hHHHHHHHHhhh
Q 000211         1005 DYLEVELQQLSS 1016 (1852)
Q Consensus      1005 ~~~e~elq~l~s 1016 (1852)
                      ..|..++..+..
T Consensus         9 ~~l~~~~~~~~~   20 (284)
T 1c1g_A            9 QMLKLDKENALD   20 (284)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHhHHHHHH
Confidence            333444433333

PyMOL of 1c1g

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A	Back alignment and structure

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A	Back alignment and structure

>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}	Back alignment and structure

>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}	Back alignment and structure

>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}	Back alignment and structure

Probab=85.25  E-value=12  Score=40.79  Aligned_cols=162  Identities=20%  Similarity=0.198  Sum_probs=74.3

Q ss_pred             hHHHHHHHhhhhHHHhhHHHHHhhhhhhhhhhhhhcc-cccchHHHHHHHHHhhhHhhhhhhhhhcccchhhhHHHHHHH
Q 000211         1247 SLRDELQSERSLRDELKNVVTDLTSQLNEKHCQLLDL-DQQKSELVQLKLLVLDLESEKSRASEESSSVTSLQSELSEMH 1325 (1852)
Q Consensus      1247 Sl~eEL~~ersLreeLE~tV~~L~skLdEk~~qL~~f-d~~~~EL~~Lk~qv~DLese~S~~~~ktsefk~Ls~hL~El~ 1325 (1852)
                      |.++++.=-+.+=+.....+..+...|+|-+.-=-.+ ..-..+|..+.+++.+|.+++.+...+..          ..+
T Consensus         7 s~~ee~~ywk~~~~~~~q~~~~le~El~EFqesSrELE~ELE~eL~~~Ek~~~~L~~~~~~L~~E~e----------~~k   76 (189)
T 2v71_A            7 SLKEETAYWKELSMKYKQSFQEARDELVEFQEGSRELEAELEAQLVQAEQRNRDLQADNQRLKYEVE----------ALK   76 (189)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HHH
Confidence            3444444444444444445555555555443221111 12234556666666666666664433333          333


Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHhhhccHHHHHHHhhhhhhHHHHHHHHHHHhHHHHHHHHHHH
Q 000211         1326 ELLLAVDVRLIFTRTQYEAWVEELVQQVYSTDRLLTELHTKNVDVETVLNSCLAREAQCNEENARLLTSLDTLRSELDSA 1405 (1852)
Q Consensus      1326 e~l~A~dvriiF~KeQYEtkvqEL~~QL~~Skk~~eElq~K~qDaedeln~~lksEa~~~keNaeL~~~I~eLesELeas 1405 (1852)
                      .++.       -.+.+.-+-+..|..++.....--..+++++.|.+-.++..=.++...       ..++.-+++-+..+
T Consensus        77 ~K~~-------~~~~e~~~~~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlEr~~R~~-------~~SleD~e~kln~a  142 (189)
T 2v71_A           77 EKLE-------HQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRAT-------IMSLEDFEQRLNQA  142 (189)
T ss_dssp             HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHH
T ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH-------HhhHHHHHHHHHHH
Confidence            3332       223333445555666666666666666666666665555432222222       23333444444433


Q ss_pred             HHhhHhhhhchhhhhhchhhhhhhhHHhhhhhhhh
Q 000211         1406 IAENRVLFHENNSLIAQSEEYKSRAETMADNYGEH 1440 (1852)
Q Consensus      1406 iaekR~L~nand~~~AElEE~Kqr~E~~l~~~~Ee 1440 (1852)
                             +.+|-.+-.|+++ |..+....+...++
T Consensus       143 -------iEr~alLE~El~E-Ke~l~~~~QRLkdE  169 (189)
T 2v71_A          143 -------IERNAFLESELDE-KESLLVSVQRLKDE  169 (189)
T ss_dssp             -------HHHHHHHHHHHHH-HHHHHCCC------
T ss_pred             -------HHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence                   3444444555553 55555444444444

PyMOL of 2v71

>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1852
d1rlwa_		126	Domain from cytosolic phospholipase A2 {Human (Hom	82.06

>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: PLC-like (P variant)
domain: Domain from cytosolic phospholipase A2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.06  E-value=0.5  Score=43.35  Aligned_cols=46  Identities=13%  Similarity=0.211  Sum_probs=36.4

Q ss_pred             CCCcccccceeecchhhcccccCCeeeeecCCCCCCCCeEEEEEeeec
Q 000211           94 GSSRSSILGEATINLADYADASKPSTVLLPLHGGDSGTILHVTVQLLT  141 (1852)
Q Consensus        94 GSsksgiLGEasinlAdY~~a~kp~~VSLPLk~cnsGtvLHVtIQ~l~  141 (1852)
                      +..+..+||++.|+|+++.. ..+..+.+||+.... .-+|++++.++
T Consensus        80 d~~~d~~lG~~~i~L~~l~~-~~~~~~~~~L~~~~~-g~i~~~l~~~~  125 (126)
T d1rlwa_          80 NYVMDETLGTATFTVSSMKV-GEKKEVPFIFNQVTE-MVLEMSLEVAS  125 (126)
T ss_dssp             CSSCCEEEEEEEEEGGGSCT-TCEEEEEEEETTTEE-EEEEEEEECCC
T ss_pred             CCCCCCeEEEEEEEHHHccC-CCeEEEEEEccCCCe-EEEEEEEEEEe
Confidence            34457899999999999754 678899999988754 45599988764

PyMOL of d1rlwa_