Citrus Sinensis ID: 000226
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1832 | ||||||
| 255550297 | 1821 | fyve finger-containing phosphoinositide | 0.984 | 0.990 | 0.684 | 0.0 | |
| 225444589 | 1865 | PREDICTED: uncharacterized protein LOC10 | 0.995 | 0.978 | 0.676 | 0.0 | |
| 359482442 | 1848 | PREDICTED: uncharacterized protein LOC10 | 0.990 | 0.981 | 0.650 | 0.0 | |
| 356547984 | 1812 | PREDICTED: 1-phosphatidylinositol-3-phos | 0.972 | 0.983 | 0.641 | 0.0 | |
| 297742933 | 1652 | unnamed protein product [Vitis vinifera] | 0.894 | 0.991 | 0.626 | 0.0 | |
| 147793048 | 1893 | hypothetical protein VITISV_043718 [Viti | 0.982 | 0.950 | 0.606 | 0.0 | |
| 255584440 | 1838 | fyve finger-containing phosphoinositide | 0.986 | 0.983 | 0.619 | 0.0 | |
| 224119558 | 1763 | predicted protein [Populus trichocarpa] | 0.949 | 0.986 | 0.613 | 0.0 | |
| 356559220 | 1815 | PREDICTED: 1-phosphatidylinositol-3-phos | 0.970 | 0.979 | 0.604 | 0.0 | |
| 356522446 | 1825 | PREDICTED: 1-phosphatidylinositol-3-phos | 0.967 | 0.971 | 0.603 | 0.0 |
| >gi|255550297|ref|XP_002516199.1| fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis] gi|223544685|gb|EEF46201.1| fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2451 bits (6353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1265/1849 (68%), Positives = 1462/1849 (79%), Gaps = 45/1849 (2%)
Query: 1 MGTPDNKLSDLLDVVRSWIPRRSEPANVSRDFWMPDQSCRVCYECDSQFTVFNRRHHCRL 60
MGTPDNK+SD +D+V+SWIPRRSE NVSRDFWMPD SCRVCYECDSQFTVFNRRHHCRL
Sbjct: 1 MGTPDNKISDFVDIVKSWIPRRSESTNVSRDFWMPDHSCRVCYECDSQFTVFNRRHHCRL 60
Query: 61 CGLVFCAKCTTNSVPASFDESRTGREDSERIRVCNYCFRQWEQGIGALDNGTTQAPSPGL 120
CG VFCAKCT +S+PA D+ R G ED ERIRVCNYCF+QW+ G A DNGT A SP L
Sbjct: 61 CGRVFCAKCTASSIPAPSDDPRNGGEDWERIRVCNYCFKQWQHGTAAPDNGTNMA-SPVL 119
Query: 121 SPSASATSLASTKSSCTCYSSSGTVSSTPYSTGPYQHVPYTSCVSPRQSEQMDPLIVEQE 180
SPS SATSL STKSSCTC SS TV STPYSTG YQ VPY+S +SP+QS QMDP +EQE
Sbjct: 120 SPSPSATSLVSTKSSCTCNSSDSTVGSTPYSTGAYQRVPYSSALSPQQSAQMDPTAIEQE 179
Query: 181 NVKSESSTNSSAAIVVNSSSNQSGFSMN-SDDEDDDYRIYTSDLDTRQYSLPNDYYGDVN 239
N ST+++AA ++SS+++ G+ MN SDDEDD Y +Y S T+ +S + YYG V
Sbjct: 180 NATCGRSTDTTAA-ALHSSADKLGYCMNRSDDEDDVYGLYRSVSGTKHFSHADVYYGPVT 238
Query: 240 IDNIDHTYGAQEVDHVRENINRRSLSCELS--ENFDTQGLKKIKEHGDKIHERYDVDECE 297
D I+H YG E+ + + I+ +C L ENF TQG+ KIK G++ + D DECE
Sbjct: 239 FDEIEHMYGPHEMINGGDQIDATG-TCSLPSPENFYTQGVDKIKNDGEEAYGHED-DECE 296
Query: 298 APLYDEEATEYEPVDFEKEGLLWIPPEPADEEDEREAILFDDDDDEGG-TGEWGYLRSSN 356
+P+YD +A + EPVDFE GLLW+PPEP DEEDEREA+LFDDD+D+ TGEWGYLR SN
Sbjct: 297 SPVYDVDAADAEPVDFENNGLLWLPPEPEDEEDEREAVLFDDDEDDEAATGEWGYLRPSN 356
Query: 357 SFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDENDRESWLEIITSL 416
SFG+GEYR +DKS E+HRKA+KNVVEGHFRALVAQLLQVENL VGDE+D+ESWLEIITSL
Sbjct: 357 SFGNGEYRCKDKSSEDHRKAMKNVVEGHFRALVAQLLQVENLTVGDEDDKESWLEIITSL 416
Query: 417 SWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDK 476
SWEAATLLKPD SK GGMDPG YVKVKC+ACG RSESMVVKGVVCKKNVAHRRM SKIDK
Sbjct: 417 SWEAATLLKPDTSKGGGMDPGGYVKVKCIACGHRSESMVVKGVVCKKNVAHRRMMSKIDK 476
Query: 477 PRFLILGGALEYQRVANHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQD 536
PRFLILGGALEYQRV+NHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQ+
Sbjct: 477 PRFLILGGALEYQRVSNHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSVSRYAQE 536
Query: 537 YLLAKDISLVLNIKRPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLEEHGSAG 596
YLLAKDISLVLNIK+ LLERIARCTGA IVPSIDHL SQKLGYCD FHVEKFLEEHGSAG
Sbjct: 537 YLLAKDISLVLNIKKSLLERIARCTGAHIVPSIDHLNSQKLGYCDLFHVEKFLEEHGSAG 596
Query: 597 QGGKKLSKTLMFVEGCPKPLGCTILLKGANGDNLKKAKHVVQYGVFAAYHLALETSFLAD 656
QGGKKL+KTLMF EGCPKPLG TILL+GA+GD LKK KHVVQYGVFAAYHLALETSFLAD
Sbjct: 597 QGGKKLTKTLMFFEGCPKPLGYTILLRGAHGDELKKVKHVVQYGVFAAYHLALETSFLAD 656
Query: 657 EGASLPQLPLKSPITVALPVKPSNIDRSISTIPGFMTPATGKPLSPKLNNELQKSNKGLI 716
EGASLPQLPL S I VALP KPS+IDRSISTIPGF TGKP + NE+QKSN G+I
Sbjct: 657 EGASLPQLPLTSSIAVALPDKPSSIDRSISTIPGFSVQGTGKPSGFEPTNEVQKSNAGVI 716
Query: 717 SNSLSTTNVK-SLSSFEGDNSTSHLEGPHSQNMDMQPSLSSTEATA----SSIS---LYP 768
S S TN + + +S D+ST + P S+ + ++TE T SS+ L P
Sbjct: 717 SEMASPTNFEPACNSGGADDSTCLSKTPSSETECRNTASNTTENTGFLTLSSLGHNILGP 776
Query: 769 TKQDIS--NFYQKDSSPKHASKEEIKVGPKESLKFLMDDNAVSNCFGTTEPSRRVAGWSL 826
++S + ++KD + A+ + K E F +D V GT+ A S
Sbjct: 777 CHNNLSSDDVFRKDVKMEAANSCQSKKTNTEKAGF--NDPLVHRSVGTSMELEEGANSSH 834
Query: 827 VDGNAFASNHQASPELVSSKQDSNNNNEERGSSKEEFPPSPSDHRSILVSLSTRCVWKGS 886
DG A+ + +N+ EE GSSKEEFPPSPSDH+SILVSLSTRCVWKG+
Sbjct: 835 PDGKDLAA------------KQVDNSLEEIGSSKEEFPPSPSDHQSILVSLSTRCVWKGT 882
Query: 887 VCERPHLFRIKYYGSTDNPLGRFLRDNLFDQSYRCRSCDMPSEAHVHCYTHRQGSLTISV 946
VCER HLFRIKYYGS D PLGRFLRD+LFDQ+Y C SC+MPSEAHV+CYTHRQGSLTISV
Sbjct: 883 VCERAHLFRIKYYGSFDKPLGRFLRDHLFDQNYCCCSCEMPSEAHVYCYTHRQGSLTISV 942
Query: 947 KKLSEILLPGEREGKIWMWHRCLRCPRTNGFPPATRRVVMSDAAWGLSFGKFLELSFSNH 1006
KKL E LLPGEREGKIWMWHRCLRCPR NGFPPATRRVVMSDAAWGLSFGKFLELSFSNH
Sbjct: 943 KKLPEFLLPGEREGKIWMWHRCLRCPRINGFPPATRRVVMSDAAWGLSFGKFLELSFSNH 1002
Query: 1007 AAASRVANCGHSLHRDCLRFYGFGQMVACFRYASIDVNSVYLPPPKIEFNYDTQGWIKEE 1066
AAASRVA+CGHSL RDCLRFYGFG+MVACFRYASI V SV LPP KI+FNYD Q WI+ E
Sbjct: 1003 AAASRVASCGHSLQRDCLRFYGFGRMVACFRYASIHVYSVSLPPSKIKFNYDDQEWIQNE 1062
Query: 1067 ANEVRRRAELLFKDVRHTLQDLSKKI-AVGSEDGSMKTAE-ARVHISELEGMQQKDEVEF 1124
ANEV +RAELLFK+V++ LQ +S+KI GS++G +K +E +R+ I+ELEGM QK++ +F
Sbjct: 1063 ANEVHQRAELLFKEVQNALQRISEKILGAGSQNGDLKASELSRLRIAELEGMLQKEKEQF 1122
Query: 1125 EESLQQALCKEVKLGLPAIDILEINRLRRQILFHSCVWDQRLIRAASLVNSYLREGTNAF 1184
E+S L K++K G P +DIL+IN+L+RQILFHS VWDQ LI A SL N +E +F
Sbjct: 1123 EDSFWDVLSKDMKNGQPVVDILDINKLQRQILFHSYVWDQLLINAGSLRNISPQESPKSF 1182
Query: 1185 VPKLKEKPVSPVEKPVDVNAAFKPSKGFSSFVSLPLEVKPGAHCNRGISGDIHEPHRVQK 1244
VPK+KEK V+ VE V+++ KP+K S V ++ G N +HE K
Sbjct: 1183 VPKVKEKSVNSVEDLVEMDIPLKPNKDTKSEVH---PIRGGNDSNNSQLVRVHE----TK 1235
Query: 1245 ESGVDQDPSYKEADQFLSSSESVSYKPEPQESGKLVRRALSDGEFPKMADLSDTLDAAWT 1304
VD + KEA++ LSSS +++ K +P ESGK+VRRA S+GEFP M +LSDTLDAAWT
Sbjct: 1236 NLVVDLNLR-KEAERSLSSSANINEKNDPHESGKVVRRAFSEGEFPVMDNLSDTLDAAWT 1294
Query: 1305 GENHPANVIGKESGYSLPDPTLVDSSSKLNSVAASTAEQGGLEVVRSLSSVSSTKGTENM 1364
G+NH N++ KE+ S PDPT +++ + + A++GG+E L + T T+ +
Sbjct: 1295 GKNHLVNMVRKENVLSSPDPTALNTVHANSGLENCVADKGGIEKAH-LPGSALTAKTKKV 1353
Query: 1365 TNSRSLVGMPFSSFYSSFNKNSSLNAQKLTVSEYNPTYVMSLWDSERLSGARLFLPVGVN 1424
NS SL GM F + +SSF SSLN QKL +SE+NP YV+ + ER SGARL LPV +N
Sbjct: 1354 ENS-SLAGMSFPNIHSSFKWTSSLNVQKLNISEHNPVYVLLFRELERQSGARLLLPVSIN 1412
Query: 1425 DTIVPVYDDEPTSVIVYTLVSSDYHVQISEFERAKDAADSAAAS-AIFDSVNLLSVSSFD 1483
DTI+PVYDDEPTS+I Y L SSDY +SE E+ +D DS ++S +FDSVNLLS +SFD
Sbjct: 1413 DTIIPVYDDEPTSIIAYALYSSDYRQLMSECEKPRDIGDSTSSSLPLFDSVNLLSFNSFD 1472
Query: 1484 DTTSDRDKSLGSADEAVFSTSGSRGSQVLDPLSYTKDLHARISFTDDGLLGKVKYTVTCY 1543
++ SD +SLGS +E++ S GSRGSQVLDPL YTKDLHAR+SFTDD L GKVKY VTCY
Sbjct: 1473 ESASDIYRSLGSIEESILSIPGSRGSQVLDPLLYTKDLHARVSFTDDSLQGKVKYVVTCY 1532
Query: 1544 FAKRFDALRRMCCHSELDFIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVPKTELES 1603
+AKRF+ALR++ C SELDFIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQV KTELES
Sbjct: 1533 YAKRFEALRKISCPSELDFIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELES 1592
Query: 1604 FIKFGPAYFKYLSESISTGSPTCLAKILGIYQVASKHFKGGKESKMDLLVMENLLFRRNI 1663
FIKFGPAYFKYLS+SISTGSPTCLAKILGIYQV+SKH KGGKESKMD+LVMENLLFRRN+
Sbjct: 1593 FIKFGPAYFKYLSDSISTGSPTCLAKILGIYQVSSKHLKGGKESKMDVLVMENLLFRRNV 1652
Query: 1664 TRLYDLKGSSRSRYNADTSGSNKVLLDQNLIEAMPTSPIFVGSKAKRLLERAVWNDTAFL 1723
RLYDLKGSSRSRYNADTSGSNKVLLDQNLIE MPTSPIFVG+KAKRLLERAVWNDT+FL
Sbjct: 1653 VRLYDLKGSSRSRYNADTSGSNKVLLDQNLIETMPTSPIFVGNKAKRLLERAVWNDTSFL 1712
Query: 1724 ASIDVMDYSLLVGIDEEKHELVLGIIDFMRQYTWDKHLETWVKTSGILGGPKNTSPTVIS 1783
AS+DVMDYSLLVG+DE++HELV+GIIDFMRQYTWDKHLETWVK SGILGG KNT+PTVIS
Sbjct: 1713 ASVDVMDYSLLVGVDEKRHELVVGIIDFMRQYTWDKHLETWVKASGILGGSKNTTPTVIS 1772
Query: 1784 PQQYKKRFRKAMTTYFLMLPEQWTPPSIIHSGSQSDLCEENTHGGASFD 1832
PQQYKKRFRKAMT YFLM+P+QW+PP+II SGSQSDLCEEN GGAS D
Sbjct: 1773 PQQYKKRFRKAMTAYFLMVPDQWSPPTIIPSGSQSDLCEENLQGGASVD 1821
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225444589|ref|XP_002277309.1| PREDICTED: uncharacterized protein LOC100267980 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359482442|ref|XP_002271263.2| PREDICTED: uncharacterized protein LOC100254952 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356547984|ref|XP_003542384.1| PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297742933|emb|CBI35800.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147793048|emb|CAN62134.1| hypothetical protein VITISV_043718 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255584440|ref|XP_002532951.1| fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis] gi|223527280|gb|EEF29435.1| fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224119558|ref|XP_002331190.1| predicted protein [Populus trichocarpa] gi|222873311|gb|EEF10442.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356559220|ref|XP_003547898.1| PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356522446|ref|XP_003529857.1| PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1832 | ||||||
| TAIR|locus:2091050 | 1791 | FAB1B "FORMS APLOID AND BINUCL | 0.581 | 0.595 | 0.554 | 0.0 | |
| TAIR|locus:2125884 | 1757 | FAB1A "FORMS APLOID AND BINUCL | 0.385 | 0.402 | 0.553 | 0.0 | |
| TAIR|locus:2013965 | 1648 | FAB1C "FORMS APLOID AND BINUCL | 0.272 | 0.302 | 0.512 | 0.0 | |
| TAIR|locus:2026109 | 1456 | FAB1D "FORMS APLOID AND BINUCL | 0.174 | 0.219 | 0.519 | 1.3e-189 | |
| UNIPROTKB|Q9Y2I7 | 2098 | PIKFYVE "1-phosphatidylinosito | 0.174 | 0.152 | 0.418 | 2.1e-145 | |
| RGD|1592067 | 2097 | Pikfyve "phosphoinositide kina | 0.174 | 0.152 | 0.423 | 2.5e-145 | |
| UNIPROTKB|F1PXC7 | 2100 | PIKFYVE "Uncharacterized prote | 0.174 | 0.151 | 0.415 | 2.8e-145 | |
| MGI|MGI:1335106 | 2097 | Pikfyve "phosphoinositide kina | 0.174 | 0.152 | 0.421 | 5.4e-145 | |
| ZFIN|ZDB-GENE-030131-9636 | 2100 | pikfyve "phosphoinositide kina | 0.201 | 0.175 | 0.376 | 2.1e-144 | |
| UNIPROTKB|F1SST9 | 2105 | PIKFYVE "Uncharacterized prote | 0.174 | 0.151 | 0.421 | 2.3e-144 |
| TAIR|locus:2091050 FAB1B "FORMS APLOID AND BINUCLEATE CELLS 1B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2917 (1031.9 bits), Expect = 0., Sum P(2) = 0.
Identities = 612/1103 (55%), Positives = 726/1103 (65%)
Query: 1 MGTPDNK---LSDLLDVVRSWIPRRSEPANVSRDFWMPDQSCRVCYECDSQFTVFNRRHH 57
MGT D+ S+++ +++SW+P RSEPA VSRDFWMPDQSCRVCYECD QFT+ NRRHH
Sbjct: 1 MGTRDSNNRTFSEIVGLIKSWLPWRSEPATVSRDFWMPDQSCRVCYECDCQFTLINRRHH 60
Query: 58 CRLCGLVFCAKCTTNSVPASFDESRTGREDSERIRVCNYCFRQWEQGIGALDNGTTQXXX 117
CR CG VFC KCT NS+P + + RT RED ERIRVCNYCFRQWEQG D G
Sbjct: 61 CRHCGRVFCGKCTANSIPFAPSDLRTPREDWERIRVCNYCFRQWEQG----DGGPHVSNI 116
Query: 118 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQHVPYTSCVSPRQSEQMDPLIV 177
Q V + S VS M+ +
Sbjct: 117 TELSTSPSETSLLSSKTSTTANSSSFALGSMPGLIGLNQRVHHGSDVSLHGVSSMETSVT 176
Query: 178 EQENVKSEXXXXXXXXXXXXXXXXXXXXXXXXDDEDDDYRIYTSDLDTRQYSLPNDYYGD 237
+Q K DDE D+Y Y +D++T N+YYG
Sbjct: 177 KQG--KETSRRSSFIATDVEDPSRFALNSIRSDDEYDEYGAYQTDIETSHSPRANEYYGP 234
Query: 238 VNIDNIDHTYGAQEVD--HVR-ENINRRSLS-CELSENFDTQGLKKIKEHGDKIHERYDV 293
+ + + G +V H+ E +++SLS L +++ E K E
Sbjct: 235 MEYNGM----GIDDVPCKHLGGETADQKSLSGSPLIHQCLESLIREGSEQFQKKSEHDGR 290
Query: 294 DECEA--PLYDEEATEYEPVDFEKEGLLWIXXXXXXXXXXXXXXXXXXXXXXXXXXXX-X 350
DECEA P + EPVDFE GLLW+
Sbjct: 291 DECEASSPADISDDQVVEPVDFENNGLLWVPPEPENEEDERESALFDEEDNEGDASGEWG 350
Query: 351 YLRSSNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDENDRESWL 410
YLR S SFGSGEYR D++ EEH+KA+KNVV+GHFRAL+AQLLQVEN+ V DE +ESWL
Sbjct: 351 YLRPSTSFGSGEYRGEDRTTEEHKKAMKNVVDGHFRALLAQLLQVENISVSDEEGKESWL 410
Query: 411 EIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRM 470
EIITSLSWEAA LLKPDMSK GGMDPG YVKVKCLA G R +SMVVKGVVCKKNV +RRM
Sbjct: 411 EIITSLSWEAANLLKPDMSKSGGMDPGGYVKVKCLASGFRHDSMVVKGVVCKKNVVNRRM 470
Query: 471 TSKIDKPRFLILGGALEYQRVANHLSSVDTLLQQEMDHLKMAVTKIDAHHPNVLLVEKSV 530
++KI+K R LILGG LEYQRV+N LSS DTLLQQE DHLKMAV KI A PN+LLVEKSV
Sbjct: 471 STKIEKARLLILGGGLEYQRVSNQLSSFDTLLQQEKDHLKMAVAKIHAERPNILLVEKSV 530
Query: 531 SRYAQDYLLAKDISLVLNIKRPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLE 590
SR+AQ+YLLAKDISLVLNIKRPLL+RIARCTGAQI+PS+DHL+SQKLGYC+ F V+++ E
Sbjct: 531 SRFAQEYLLAKDISLVLNIKRPLLDRIARCTGAQIIPSVDHLSSQKLGYCENFRVDRYPE 590
Query: 591 EHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGDNLKKAKHVVQYGVFAAYHLALE 650
EHGS GQ GKK+ KTLM+ E CPKPLG TILL+GAN D LKK KHVVQYGVFAAYHLALE
Sbjct: 591 EHGSTGQVGKKVVKTLMYFEHCPKPLGFTILLRGANEDELKKVKHVVQYGVFAAYHLALE 650
Query: 651 TSFLADEGASLPQLPLKSPITVALPVKPSNIDRSISTIPGFMTPATGKPLSPKLNN--EL 708
TSFLADEGAS P+LPL SPITVALP K ++I+RSIST+PGF K SP + + E
Sbjct: 651 TSFLADEGAS-PELPLNSPITVALPDKSTSIERSISTVPGFTVSTYEK--SPTMLSCAEP 707
Query: 709 QKSNKGLISNSLSTTNVKSLSSFEGDNSTSHLEGPHSQNMDMQPSLSSTEATASSISLYP 768
Q++N +S LSTT +LS + + G Q ++ PS + S ++L P
Sbjct: 708 QRANSVPVSELLSTTT--NLSIQKDIPPIPY--GSGWQAREINPSFVFSRHNIS-LNL-P 761
Query: 769 TKQDISNFYQKDSSPKHASKEEIKVGPKESLKFLMDDNAVSNCFGTTEPSRRVAGWSLVD 828
+ + D S + + +S ++ D +N + V S +
Sbjct: 762 DR--VIESRNSDLSGRSVP---VDTPADKSNPIVVADETTNNSLHLSGQGF-VRKSSQIG 815
Query: 829 GNAFASNHQASPELVSSKQDSNNNNEERGSSKEEFPPSPSDHRSILVSLSTRCVWKGSVC 888
+ N EL ++Q +N +E S KEEFPPSPSDH+SILVSLS+R VWKG+VC
Sbjct: 816 TSIMVENQDNGSELTIAQQQNNEKPKETQSQKEEFPPSPSDHQSILVSLSSRSVWKGTVC 875
Query: 889 ERPHLFRIKYYGSTDNPLGRFLRDNLFDQSYRCRSCDMPSEAHVHCYTHRQGSLTISVKK 948
ER HLFRIKYYGS D PLGRFLRD+LFDQSYRCRSC+MPSEAHVHCYTHRQGSLTISVKK
Sbjct: 876 ERSHLFRIKYYGSFDKPLGRFLRDHLFDQSYRCRSCEMPSEAHVHCYTHRQGSLTISVKK 935
Query: 949 LSEILLPGEREGKIWMWHRCLRCPRTNGFPPATRRVVMSDAAWGLSFGKFLELSFSNHAA 1008
L + LLPGE+EGKIWMWHRCLRCPR NGFPPAT RVVMSDAAWGLSFGKFLELSFSNHAA
Sbjct: 936 LQDYLLPGEKEGKIWMWHRCLRCPRLNGFPPATLRVVMSDAAWGLSFGKFLELSFSNHAA 995
Query: 1009 ASRVANCGHSLHRDCLRFYGFGQMVACFRYASIDVNSVYLPPPKIEFNYDTQGWIKEEAN 1068
ASRVA CGHSLHRDCLRFYGFG MVACFRYA+IDV+SVYLPP + FNY+ Q WI+ E +
Sbjct: 996 ASRVACCGHSLHRDCLRFYGFGNMVACFRYATIDVHSVYLPPSILSFNYENQDWIQRETD 1055
Query: 1069 EVRRRAELLFKDVRHTLQDLSKK 1091
EV RAELLF +V + + +++K
Sbjct: 1056 EVIERAELLFSEVLNAISQIAEK 1078
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| TAIR|locus:2125884 FAB1A "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2013965 FAB1C "FORMS APLOID AND BINUCLEATE CELLS 1C" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2026109 FAB1D "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9Y2I7 PIKFYVE "1-phosphatidylinositol 3-phosphate 5-kinase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|1592067 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PXC7 PIKFYVE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| MGI|MGI:1335106 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-9636 pikfyve "phosphoinositide kinase, FYVE finger containing" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SST9 PIKFYVE "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1832 | |||
| cd03334 | 261 | cd03334, Fab1_TCP, TCP-1 like domain of the eukary | 1e-132 | |
| cd00139 | 313 | cd00139, PIPKc, Phosphatidylinositol phosphate kin | 1e-113 | |
| pfam01504 | 255 | pfam01504, PIP5K, Phosphatidylinositol-4-phosphate | 1e-79 | |
| smart00330 | 342 | smart00330, PIPKc, Phosphatidylinositol phosphate | 1e-65 | |
| COG5253 | 612 | COG5253, MSS4, Phosphatidylinositol-4-phosphate 5- | 2e-63 | |
| cd03333 | 209 | cd03333, chaperonin_like, chaperonin_like superfam | 4e-56 | |
| TIGR02344 | 525 | TIGR02344, chap_CCT_gamma, T-complex protein 1, ga | 1e-28 | |
| pfam00118 | 481 | pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin fami | 2e-28 | |
| cd00309 | 464 | cd00309, chaperonin_type_I_II, chaperonin families | 2e-23 | |
| pfam01363 | 68 | pfam01363, FYVE, FYVE zinc finger | 5e-23 | |
| cd03337 | 480 | cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type | 1e-21 | |
| cd03343 | 517 | cd03343, cpn60, cpn60 chaperonin family | 3e-21 | |
| cd00065 | 57 | cd00065, FYVE, FYVE domain; Zinc-binding domain; t | 2e-20 | |
| TIGR02339 | 519 | TIGR02339, thermosome_arch, thermosome, various su | 4e-20 | |
| smart00064 | 68 | smart00064, FYVE, Protein present in Fab1, YOTB, V | 5e-20 | |
| smart00330 | 342 | smart00330, PIPKc, Phosphatidylinositol phosphate | 2e-18 | |
| COG0459 | 524 | COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po | 5e-14 | |
| cd03338 | 515 | cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type | 2e-12 | |
| cd03339 | 526 | cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic ty | 6e-11 | |
| cd03335 | 527 | cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type | 6e-11 | |
| TIGR02342 | 517 | TIGR02342, chap_CCT_delta, T-complex protein 1, de | 1e-10 | |
| TIGR02340 | 536 | TIGR02340, chap_CCT_alpha, T-complex protein 1, al | 4e-10 | |
| PLN03185 | 765 | PLN03185, PLN03185, phosphatidylinositol phosphate | 5e-10 | |
| cd03342 | 484 | cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type | 5e-09 | |
| PTZ00212 | 533 | PTZ00212, PTZ00212, T-complex protein 1 subunit be | 2e-08 | |
| TIGR02343 | 532 | TIGR02343, chap_CCT_epsi, T-complex protein 1, eps | 4e-08 | |
| TIGR02347 | 531 | TIGR02347, chap_CCT_zeta, T-complex protein 1, zet | 7e-08 | |
| TIGR02345 | 523 | TIGR02345, chap_CCT_eta, T-complex protein 1, eta | 4e-07 | |
| cd03340 | 522 | cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type I | 4e-06 | |
| cd03336 | 517 | cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type | 1e-05 | |
| PTZ00303 | 1374 | PTZ00303, PTZ00303, phosphatidylinositol kinase; P | 4e-04 | |
| TIGR02341 | 518 | TIGR02341, chap_CCT_beta, T-complex protein 1, bet | 0.001 |
| >gnl|CDD|239450 cd03334, Fab1_TCP, TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 | Back alignment and domain information |
|---|
Score = 412 bits (1060), Expect = e-132
Identities = 153/274 (55%), Positives = 193/274 (70%), Gaps = 14/274 (5%)
Query: 386 RALVAQLLQVENLPVGDENDRESWLEIITSLSWEAATLLKPDMSKCGGMDPGEYVKVKCL 445
RAL+AQLL+ E + + ESWL+I+ L W+AA+ +KPD+ MD +YVK+K +
Sbjct: 1 RALLAQLLKDEGIS-----NDESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKI 55
Query: 446 ACGRRSESMVVKGVVCKKNVAHRRMTSKIDKPRFLILGGALEYQRVANHLSSVDTLLQQE 505
G S+S VV GVV KNVAH+RM SKI PR L+L G LEYQRV N L S+D ++ QE
Sbjct: 56 PGGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPLEYQRVENKLLSLDPVILQE 115
Query: 506 MDHLKMAVTKIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNIKRPLLERIARCTGAQI 565
++LK V++I A P+V+LVEKSVSR AQD LL I+LVLN+K +LERI+RCTGA I
Sbjct: 116 KEYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERISRCTGADI 175
Query: 566 VPSIDHL-TSQKLGYCDTFHVEKFLEEHGSAGQGGKKLSKTLMFVEGCPKPLGCTILLKG 624
+ S+D L TS KLG C++F V ++EEHG SKTLMF EGCPK LGCTILL+G
Sbjct: 176 ISSMDDLLTSPKLGTCESFRVRTYVEEHGR--------SKTLMFFEGCPKELGCTILLRG 227
Query: 625 ANGDNLKKAKHVVQYGVFAAYHLALETSFLADEG 658
+ + LKK K VV++ VFAAYHL LETSFLADE
Sbjct: 228 GDLEELKKVKRVVEFMVFAAYHLKLETSFLADEF 261
|
Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins. Length = 261 |
| >gnl|CDD|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase | Back alignment and domain information |
|---|
| >gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >gnl|CDD|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|239449 cd03333, chaperonin_like, chaperonin_like superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|233825 TIGR02344, chap_CCT_gamma, T-complex protein 1, gamma subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215730 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin family | Back alignment and domain information |
|---|
| >gnl|CDD|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II | Back alignment and domain information |
|---|
| >gnl|CDD|216454 pfam01363, FYVE, FYVE zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|239453 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239459 cd03343, cpn60, cpn60 chaperonin family | Back alignment and domain information |
|---|
| >gnl|CDD|238022 cd00065, FYVE, FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >gnl|CDD|233823 TIGR02339, thermosome_arch, thermosome, various subunits, archaeal | Back alignment and domain information |
|---|
| >gnl|CDD|214499 smart00064, FYVE, Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >gnl|CDD|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >gnl|CDD|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|239454 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239455 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239451 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233824 TIGR02342, chap_CCT_delta, T-complex protein 1, delta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|131393 TIGR02340, chap_CCT_alpha, T-complex protein 1, alpha subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|239458 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|185514 PTZ00212, PTZ00212, T-complex protein 1 subunit beta; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|131396 TIGR02343, chap_CCT_epsi, T-complex protein 1, epsilon subunit | Back alignment and domain information |
|---|
| >gnl|CDD|233827 TIGR02347, chap_CCT_zeta, T-complex protein 1, zeta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|200176 TIGR02345, chap_CCT_eta, T-complex protein 1, eta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239456 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|239452 cd03336, TCP1_beta, TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit | Back alignment and domain information |
|---|
| >gnl|CDD|140324 PTZ00303, PTZ00303, phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|211733 TIGR02341, chap_CCT_beta, T-complex protein 1, beta subunit | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1832 | |||
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 100.0 | |
| COG5253 | 612 | MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si | 100.0 | |
| cd00139 | 313 | PIPKc Phosphatidylinositol phosphate kinases (PIPK | 100.0 | |
| smart00330 | 342 | PIPKc Phosphatidylinositol phosphate kinases. | 100.0 | |
| KOG0229 | 420 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 100.0 | |
| PLN03185 | 765 | phosphatidylinositol phosphate kinase; Provisional | 100.0 | |
| PF01504 | 252 | PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; | 100.0 | |
| TIGR02344 | 525 | chap_CCT_gamma T-complex protein 1, gamma subunit. | 100.0 | |
| KOG0364 | 527 | consensus Chaperonin complex component, TCP-1 gamm | 100.0 | |
| TIGR02339 | 519 | thermosome_arch thermosome, various subunits, arch | 100.0 | |
| cd03343 | 517 | cpn60 cpn60 chaperonin family. Chaperonins are inv | 100.0 | |
| cd03339 | 526 | TCP1_epsilon TCP-1 (CTT or eukaryotic type II) cha | 100.0 | |
| cd03335 | 527 | TCP1_alpha TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| PTZ00212 | 533 | T-complex protein 1 subunit beta; Provisional | 100.0 | |
| TIGR02343 | 532 | chap_CCT_epsi T-complex protein 1, epsilon subunit | 100.0 | |
| cd03340 | 522 | TCP1_eta TCP-1 (CTT or eukaryotic type II) chapero | 100.0 | |
| cd03334 | 261 | Fab1_TCP TCP-1 like domain of the eukaryotic phosp | 100.0 | |
| TIGR02347 | 531 | chap_CCT_zeta T-complex protein 1, zeta subunit. M | 100.0 | |
| cd03338 | 515 | TCP1_delta TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| cd03336 | 517 | TCP1_beta TCP-1 (CTT or eukaryotic type II) chaper | 100.0 | |
| TIGR02342 | 517 | chap_CCT_delta T-complex protein 1, delta subunit. | 100.0 | |
| TIGR02345 | 522 | chap_CCT_eta T-complex protein 1, eta subunit. Mem | 100.0 | |
| TIGR02340 | 536 | chap_CCT_alpha T-complex protein 1, alpha subunit. | 100.0 | |
| cd03337 | 480 | TCP1_gamma TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| TIGR02341 | 519 | chap_CCT_beta T-complex protein 1, beta subunit. M | 100.0 | |
| cd03342 | 484 | TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaper | 100.0 | |
| KOG0361 | 543 | consensus Chaperonin complex component, TCP-1 eta | 100.0 | |
| TIGR02346 | 531 | chap_CCT_theta T-complex protein 1, theta subunit. | 100.0 | |
| cd00309 | 464 | chaperonin_type_I_II chaperonin families, type I a | 100.0 | |
| KOG0363 | 527 | consensus Chaperonin complex component, TCP-1 beta | 100.0 | |
| cd03341 | 472 | TCP1_theta TCP-1 (CTT or eukaryotic type II) chape | 100.0 | |
| PF00118 | 485 | Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperon | 100.0 | |
| COG0459 | 524 | GroL Chaperonin GroEL (HSP60 family) [Posttranslat | 100.0 | |
| KOG0358 | 534 | consensus Chaperonin complex component, TCP-1 delt | 100.0 | |
| KOG0360 | 545 | consensus Chaperonin complex component, TCP-1 alph | 100.0 | |
| KOG0359 | 520 | consensus Chaperonin complex component, TCP-1 zeta | 100.0 | |
| PRK00013 | 542 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| PRK12849 | 542 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| PTZ00114 | 555 | Heat shock protein 60; Provisional | 100.0 | |
| PRK12851 | 541 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| TIGR02348 | 524 | GroEL chaperonin GroL. This family consists of Gro | 100.0 | |
| cd03344 | 520 | GroEL GroEL_like type I chaperonin. Chaperonins ar | 100.0 | |
| PRK12850 | 544 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| PRK12852 | 545 | groEL chaperonin GroEL; Reviewed | 100.0 | |
| CHL00093 | 529 | groEL chaperonin GroEL | 100.0 | |
| PRK14104 | 546 | chaperonin GroEL; Provisional | 100.0 | |
| cd03333 | 209 | chaperonin_like chaperonin_like superfamily. Chape | 100.0 | |
| PLN03167 | 600 | Chaperonin-60 beta subunit; Provisional | 100.0 | |
| KOG0362 | 537 | consensus Chaperonin complex component, TCP-1 thet | 99.97 | |
| KOG0357 | 400 | consensus Chaperonin complex component, TCP-1 epsi | 99.94 | |
| KOG0356 | 550 | consensus Mitochondrial chaperonin, Cpn60/Hsp60p [ | 99.81 | |
| PF01363 | 69 | FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f | 99.55 | |
| smart00064 | 68 | FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | 99.44 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 99.35 | |
| KOG1729 | 288 | consensus FYVE finger containing protein [General | 99.34 | |
| KOG1819 | 990 | consensus FYVE finger-containing proteins [General | 99.33 | |
| KOG1818 | 634 | consensus Membrane trafficking and cell signaling | 99.23 | |
| cd00065 | 57 | FYVE FYVE domain; Zinc-binding domain; targets pro | 98.98 | |
| KOG1842 | 505 | consensus FYVE finger-containing protein [General | 98.79 | |
| KOG1841 | 1287 | consensus Smad anchor for receptor activation [Def | 98.65 | |
| KOG1843 | 473 | consensus Uncharacterized conserved protein [Funct | 98.38 | |
| KOG1409 | 404 | consensus Uncharacterized conserved protein, conta | 98.02 | |
| KOG4424 | 623 | consensus Predicted Rho/Rac guanine nucleotide exc | 97.52 | |
| KOG1811 | 1141 | consensus Predicted Zn2+-binding protein, contains | 97.17 | |
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 94.13 | |
| PF02318 | 118 | FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 | 94.02 | |
| KOG1729 | 288 | consensus FYVE finger containing protein [General | 88.03 | |
| KOG1841 | 1287 | consensus Smad anchor for receptor activation [Def | 84.2 |
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-249 Score=2337.69 Aligned_cols=1577 Identities=49% Similarity=0.750 Sum_probs=1147.6
Q ss_pred CCCccccccccccccccccccccccCcEEecCCCCCeeeCCCCCCcCCCCCCcccccccchHHHHhhcccCCCCCCCCCC
Q 000226 37 QSCRVCYECDSQFTVFNRRHHCRLCGLVFCAKCTTNSVPASFDESRTGREDSERIRVCNYCFRQWEQGIGALDNGTTQAP 116 (1832)
Q Consensus 37 ~~~~~C~~C~~~Fs~~~RkHHCR~CG~vfC~~Cs~~~~~~p~~~~~~~~~~~~~vRVC~~C~~~~~~~~~~~~~~~~~~~ 116 (1832)
..+..|+.|+ +..+||||||.||++||++|. +.. ...+|||+.|+.++.+.......
T Consensus 3 ~s~~~~~~~~---t~~~~~~~~~~~g~~~~~~~~------~~~--------~~~i~~~~~~~~~~~~~~~~~~~------ 59 (1598)
T KOG0230|consen 3 QSSNVCYDCD---TSVNRRHHCRVCGRVFCSKCQ------DSP--------ETSIRVCNECRGQWEQGNVAPSD------ 59 (1598)
T ss_pred ccccchhccc---cccccCCCCcccCceeccccC------CCC--------ccceeehhhhhhhccccCCCCcc------
Confidence 5567899999 788999999999999999997 111 24899999999998776433311
Q ss_pred CCCCCCCCCcCCccCCCCCCccccCCCCccCCcCCCCCccccCCcCCCCCCCcccCChhhHhhhhccccCCCCCccceec
Q 000226 117 SPGLSPSASATSLASTKSSCTCYSSSGTVSSTPYSTGPYQHVPYTSCVSPRQSEQMDPLIVEQENVKSESSTNSSAAIVV 196 (1832)
Q Consensus 117 s~~~s~s~s~~s~~s~~ss~t~~ss~~~~~s~~~s~g~~~~~~~ss~~s~~~~~~~~~~~l~q~~~~~~~~~~~~~~~~~ 196 (1832)
...++++.. ++ .+. +.++.+ +++. .+-.-++ . -+..+.++...-+|.-++.-+..- ...-+.
T Consensus 60 --~~~~~~~~~---~~-~s~-~~~s~s-l~s~--~n~r~~~---~----m~d~s~~ec~~~~~~~~t~Rr~~~-~~gqi~ 121 (1598)
T KOG0230|consen 60 --RVHTSPSPT---AN-VST-ASNSSS-LASS--LNYRDKE---N----MPDSSSKECYDCEQKFETFRRKHH-CCGQIF 121 (1598)
T ss_pred --eeccCCCCC---CC-ccc-ccccch-hhcc--cCccccc---c----CCccccchhhhhccchhhhhcccc-cCcccc
Confidence 111111111 00 111 111111 2211 1111111 1 233344566666665444433331 111022
Q ss_pred CCCCCCCCCCCCCCCccccccccccccccCCCCCCCCCCCCccccCccccCCCceecccccccccccccccCCccccccc
Q 000226 197 NSSSNQSGFSMNSDDEDDDYRIYTSDLDTRQYSLPNDYYGDVNIDNIDHTYGAQEVDHVRENINRRSLSCELSENFDTQG 276 (1832)
Q Consensus 197 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (1832)
..++ -.|...|+|.|.|.++.|+.|-...|.+..+.||++..-++.+++...+.+..-++..-++..+.+.+.+....+
T Consensus 122 ~ss~-~~~~~~~~~~e~d~c~~~~~~~~~sss~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~s~p~~~~~~~l~ 200 (1598)
T KOG0230|consen 122 CSSC-IDGMSIRCDGELDYCSRYVEDFAKSSSSEMNQYDGPLQQNKHDDVPRARLGRKTSVGYEESLSSFPYTSDLNSLL 200 (1598)
T ss_pred CCcc-cCCcccccccccchhHHHhhhhhccCCcCCCccccchhccCCCCCcccccccccccccccccCCCCCchhHHHHH
Confidence 2233 466677999999999999999999999999999999999888888887777655554322333333223333333
Q ss_pred ccccccccccccCCCCccccCC-CCccccccccCCCCccCCCccccCCCCCCchhhhhhcccccccccCC-cCCcccccc
Q 000226 277 LKKIKEHGDKIHERYDVDECEA-PLYDEEATEYEPVDFEKEGLLWIPPEPADEEDEREAILFDDDDDEGG-TGEWGYLRS 354 (1832)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~w~pp~p~~~~d~~~~~~~~~~~~dde-vGDGTT~~~ 354 (1832)
-......+. +++...+.+|. +.+..++...+++||++||++|.||+|++|+||+|++++++|+++.+ -|.|+.++.
T Consensus 201 ~~~~~~s~~--~~n~~~~~~~~~~~~~~~~d~~~~~d~~~~~~~~~p~~pene~dd~~~~~~~~~~~~~D~~~~~~~~~~ 278 (1598)
T KOG0230|consen 201 QESNEKSQR--DENCGRSVIEFSSPNDEEEDEVEILDFENNGLLWEPPEPENEEDDAESVLADDDDDEGDTSGKWNPLRL 278 (1598)
T ss_pred hhhhhhccc--CccccccccccCCccccccccccccchhhccCCCCCCCCCcccccchhccccccccccccccccccccc
Confidence 332222222 24566788886 46666666668999999999999999999999999999775544333 366666554
Q ss_pred ceeechHHHHHhHhhhhhhchhhHHHHHHHHHHHHHHHHHHhCcCCCCCCCchhhHHHHHHHHHHHHHhcCCCCCCCCCC
Q 000226 355 SNSFGSGEYRNRDKSGEEHRKALKNVVEGHFRALVAQLLQVENLPVGDENDRESWLEIITSLSWEAATLLKPDMSKCGGM 434 (1832)
Q Consensus 355 s~vvLA~eLl~~~~~li~~g~~p~~i~~g~~~al~~qLl~~~~i~~~~~~~~~~w~~~l~~L~~eA~~~V~~d~~~~~~m 434 (1832)
+...-+.+...+.....+....+..+..+|+++++++|+..+.+++..+....+|.++++.|+|+|+..++|+.+.++.|
T Consensus 279 s~s~s~~~~~~~~~~~ee~~~~m~~~~~~~fr~~~a~Llr~~~ls~~~d~~~~~W~~ii~~L~~eaa~~~kp~~~~~~~m 358 (1598)
T KOG0230|consen 279 SNSFSAPEYKSKDKSAEEDEKVMRNVVESHFRALVAQLLRSENLSVVMDGAHQEWLDIITSLCWEAANLLKPDTDSGGLM 358 (1598)
T ss_pred cCccCCCCccccccchhhcchhhhccccchHHHHHHHHhcccCcCccccchhhhHHHHHHHHHHHHHHhcCcCcccCCCc
Confidence 44454444444444455555678889999999999999999999887766778999999999999999999999999999
Q ss_pred CCCCcEEEEEecCCCccceeEEEeeeEeeecccCCCceeecCCeEEEecccccccccccChhhHHHHHHHHHHHHHHHHH
Q 000226 435 DPGEYVKVKCLACGRRSESMVVKGVVCKKNVAHRRMTSKIDKPRFLILGGALEYQRVANHLSSVDTLLQQEMDHLKMAVT 514 (1832)
Q Consensus 435 Di~~~VkIkki~GGs~~dS~vi~GvVf~K~~a~k~M~~~i~nprILLl~~~Ley~r~~~~~~sl~~il~qE~e~L~~~V~ 514 (1832)
||.+|||||||+||+..||++|+||||.|+++||+|.+++++|||||+.|+|+|+|+.+++.|+++++.||++||+.+|+
T Consensus 359 d~~~YVkvK~I~~g~~~dS~vi~Gvv~sKn~~~k~M~~~~e~prilll~g~leyqrisn~lsS~etvlqqE~e~lk~~va 438 (1598)
T KOG0230|consen 359 DPGNYVKVKCVAGGSRVDSEVIKGVVCSKNVAHKRMATKYENPRILLLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVA 438 (1598)
T ss_pred CcccceEEEEecCCCcccceeeeEEEeecchhhhhhhhhccCCceEEEecchhhhhhhccccchHHHHhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEecCccHHHHHHHHHcCCeEEeecChHHHHHHHHHhCCEEccccCCCCCCCCceeeEEEEEEeeccccc
Q 000226 515 KIDAHHPNVLLVEKSVSRYAQDYLLAKDISLVLNIKRPLLERIARCTGAQIVPSIDHLTSQKLGYCDTFHVEKFLEEHGS 594 (1832)
Q Consensus 515 rI~~~~pnVVlvek~Vs~~Al~~L~~~gI~~v~nVk~~~LerIAr~TGA~Iissld~L~~~~LG~C~~f~v~~~~~e~~~ 594 (1832)
+|.+.+||||+|+|+|+++|+++|...||+++.|||+..|+||||||||+|++++|.++.++||+|+.|+++++.++|
T Consensus 439 rI~s~~p~vllVeksVS~~aqe~L~~k~I~lvlnvK~s~leRIsR~tga~I~~siDslt~~klg~C~~F~v~~~~e~h-- 516 (1598)
T KOG0230|consen 439 RIESLRPDVLLVEKSVSRIAQELLLDKGISLVLNVKRSLLERISRCTGADIVPSVDSLTSQKLGYCELFRVENYVEEH-- 516 (1598)
T ss_pred HHHhcCCCeEEEechHHHHHHHHhhccCeEEEEeccHHHHHHHHHHhcCceecchhhhhccccCCCccHhhhhhhhcc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCcccceEEEEEEcCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCeEEeCCCccCCCCCCCCCccccC
Q 000226 595 AGQGGKKLSKTLMFVEGCPKPLGCTILLKGANGDNLKKAKHVVQYGVFAAYHLALETSFLADEGASLPQLPLKSPITVAL 674 (1832)
Q Consensus 595 ~~~~~~k~~ktl~~fegc~~~~g~TIlLRG~s~~~L~evKr~l~dal~a~~~l~lE~~~l~GgGa~~~~~~~~~~~~~~~ 674 (1832)
+..||+|||+||++++||||+|||++.++|+++|++++++++|+||+++|.+|++|.||++.........++..
T Consensus 517 ------k~sKTlmffegc~~~lG~TiLLrG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi~~~~~~~~~~~~~ 590 (1598)
T KOG0230|consen 517 ------KPSKTLMFFEGCPKPLGCTILLRGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASISSPKLSIPTSVET 590 (1598)
T ss_pred ------cchhhhHHhhcCCCCCCceEEecCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCccccccccccceecc
Confidence 45799999999999999999999999999999999999999999999999999999999998654443332322
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCCCCCCcchhhhccccccccccccccccccccccCCCCCCcccCCCCCCCCCCCCCc
Q 000226 675 PVKPSNIDRSISTIPGFMTPATGKPLSPKLNNELQKSNKGLISNSLSTTNVKSLSSFEGDNSTSHLEGPHSQNMDMQPSL 754 (1832)
Q Consensus 675 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~ 754 (1832)
+ ...+.++++|+++..++..........++..++..+ ..+..+.+|...+++
T Consensus 591 ~----~~~~~~s~~~~~t~st~~~a~~~~~~~e~~~~~~~~------------------------~~~~ls~sp~~~~~~ 642 (1598)
T KOG0230|consen 591 S----IINRSISTSPGETDSTAEKAPVEALQVEPNRFNGAL------------------------SSELLSSSPFLEFPL 642 (1598)
T ss_pred c----ccccccccCCCCCcchhcccchhhhccchhhhhccc------------------------ccceeecccccccCC
Confidence 2 345677888877654443332111122223333222 222333444333333
Q ss_pred chhhhccccccccCc------ccc-cccccccCCCCCCCchhhhhcCCCcccccccccccccCCCCCCCCccc-cccccc
Q 000226 755 SSTEATASSISLYPT------KQD-ISNFYQKDSSPKHASKEEIKVGPKESLKFLMDDNAVSNCFGTTEPSRR-VAGWSL 826 (1832)
Q Consensus 755 ~~~~~~~~~~~~~~~------~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 826 (1832)
+. ....+..-+++. ++. ...++.+.... ...-.++ ...+..+ +.+ ...+ .....-
T Consensus 643 ~~-~~i~P~~~~~e~~~~~~~~~~~~~~lv~~~es~--------~~~~~~s-----~~~~~~~-l~e--~~~~~~~~~~~ 705 (1598)
T KOG0230|consen 643 DL-LEIAPGELVIETRLSSYSKGPKQNGLVPAHESV--------LNDLHES-----TLSILSK-LPE--TRSGTHEGNED 705 (1598)
T ss_pred Cc-cccCCccceeecchhhhcCchhhcccccccccc--------ccccccc-----ccccccc-ccc--hhcccchhccc
Confidence 30 010110000111 000 00111100000 0000000 0000000 000 0000 000000
Q ss_pred ccCccccccCCCCcccccccccccCcccccCCCCCCCCCCCCCCceEEEEEeeeecCCCCccCCCeEEEEeccCCCCCcH
Q 000226 827 VDGNAFASNHQASPELVSSKQDSNNNNEERGSSKEEFPPSPSDHRSILVSLSTRCVWKGSVCERPHLFRIKYYGSTDNPL 906 (1832)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~hQsI~Vl~Ss~~~~~~~~C~~p~l~~i~fY~~~D~tL 906 (1832)
+++ ...+.....+..+ ...+++.. ..++.++|.+||+|+||||++|++++.+|++|||++|+|||++|+||
T Consensus 706 k~~----~~~~~~~~~~~~~--~~~~~e~~---~s~~~~~~~~HQsilVl~ss~~~~k~~~C~r~~l~~ikyy~~~D~~l 776 (1598)
T KOG0230|consen 706 KGP----GLEPELANNQNIQ--RPEETEEQ---SSKDALDPSSHQSILVLFSSRSVLKGSVCERPHLLRIKYYGSFDKPL 776 (1598)
T ss_pred cCc----ccccccccccccc--chhhhhhh---hcccCCCccccceeEEEEeeeeeccCCccccccEEEEEeeccccchH
Confidence 000 0000001000000 00122222 45667799999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccCCCCCCCCcccceeeeeecCcEEEEEEEecccccCCCCCCCcEEEEeccCCCCCCCCCCCCcceEec
Q 000226 907 GRFLRDNLFDQSYRCRSCDMPSEAHVHCYTHRQGSLTISVKKLSEILLPGEREGKIWMWHRCLRCPRTNGFPPATRRVVM 986 (1832)
Q Consensus 907 G~fLe~~~~~~~~~C~sC~~p~~~H~r~yvH~~g~ltI~v~~l~~~~lpge~~~~I~mWs~C~~C~~~~g~~~~T~~v~m 986 (1832)
||||+++||++.|.|++|.+||++|+|||||++|+++|+|++++.. +||+.+|+|||||||++|++. ||+|++|+|
T Consensus 777 g~fL~~~~f~~~~~C~sC~~~~laHv~~yvh~~g~l~I~v~~~~e~-l~~e~~~kI~~w~~ClkC~~~---~~sT~rv~~ 852 (1598)
T KOG0230|consen 777 GRFLRDYLFDQRYMCPSCNEPMLAHVRCYVHGNGSLTISVKKLPEL-LPGEQKGKIWMWSRCLKCNRF---PPSTRRVVM 852 (1598)
T ss_pred hHHHHHHHhcccccCccccchHHHHHHHHhhccCceEEEeeccccc-cccccCceEEEEeccccCCCC---CCCcceeEc
Confidence 9999999999999999999999999999999999999999999876 999999999999999999975 899999999
Q ss_pred cchhhcccHHHHHhhhccCccccCCcCCCCCccccceeeccccCCeEEEEEEeeeeeeEEecCCCceeccccchhhHHHH
Q 000226 987 SDAAWGLSFGKFLELSFSNHAAASRVANCGHSLHRDCLRFYGFGQMVACFRYASIDVNSVYLPPPKIEFNYDTQGWIKEE 1066 (1832)
Q Consensus 987 S~~tw~lSFGKfLEL~F~~~~~~~r~~~C~H~l~rDhlryFg~~~~va~f~y~~I~v~ev~lPp~~l~~~~~~~~~l~~e 1066 (1832)
|++||++||||||||+||+|++++|+++|||+||||||||||||+|||+|+|++|++|+|++||.+|+|++..++|+++|
T Consensus 853 Sdaaw~lSfgKfLEl~fs~~a~~~R~~~C~Hsl~rD~L~ffgf~~mva~f~ys~i~v~~v~lpp~~l~~~~~~~~~~~~e 932 (1598)
T KOG0230|consen 853 SDAAWGLSFGKFLELSFSNHATANRVASCGHSLHRDCLRFFGFGNMVACFRYSPIEVYEVDLPPSKLEFNHIQQEWLQEE 932 (1598)
T ss_pred chhhHhhhHHHHHHhhhccccccccccCCcchhhhhhhhhcccCCceeeeeeccceeEEEeCChhhcccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCcchhh
Q 000226 1067 ANEVRRRAELLFKDVRHTLQDLSKKIAVGSEDGSMKTAEARVHISELEGMQQKDEVEFEESLQQALCKEVKLGLPAIDIL 1146 (1832)
Q Consensus 1067 ~~~v~~k~~~~~~~V~~~L~~i~~~~~~~~~~~~~~~~~~~~~i~el~~~l~~e~~~~~~~l~~~~~~~~~~~~~~~~il 1146 (1832)
.++|+.|++.+|++|.++|.+|+.+. . + +..|.+|+.+|.+|+.+|++.|+.++.+....+++.+|+|
T Consensus 933 ~k~v~~k~~~~~n~v~~~l~~i~~~~---~-----~----~~~i~~l~~~l~~e~~~f~~~l~~~~~~~~~~~~~s~d~l 1000 (1598)
T KOG0230|consen 933 IKEVIEKGEELYNEVLERLSRIAEKD---E-----N----RPLIQELKELLKHEKKEFKQNLQPIFTLEVDDGQLSHDIL 1000 (1598)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcc---c-----c----cchhhhhhhhhhhhHHHHHHhhhhhhhhccccCcchhhHH
Confidence 99999999999999999999999861 1 1 3468899999999999999999999998887788999999
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhhhhhcccCCcCccccccCCCCCCCCCCcccccCCC--CCCCCCccccCCCccCC
Q 000226 1147 EINRLRRQILFHSCVWDQRLIRAASLVNSYLREGTNAFVPKLKEKPVSPVEKPVDVNAAFK--PSKGFSSFVSLPLEVKP 1224 (1832)
Q Consensus 1147 ~lN~l~r~l~~~~~~Wd~rl~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 1224 (1832)
.+|++||.|++.++.|+.+|+.+..+.| |..... +..++. .+. ........ +.+.......
T Consensus 1001 ~l~~~rr~l~~~s~~w~~~l~s~~~~~k--~~~~~~---~~~~~~-~~~----~~~~~~r~p~~~k~~~~~~~------- 1063 (1598)
T KOG0230|consen 1001 ALNRDRRALLASSYLWDERLISLSKSLK--LESSKD---TKPKES-ETN----STAKRKRSPEPQKGVDEDSF------- 1063 (1598)
T ss_pred HHHHHHHHHHhhhccccccchhhhhhhc--cccccc---cccccc-ccc----CccccccCchhhcccccccc-------
Confidence 9999999999999999999998776666 221110 000100 000 00000000 0000000000
Q ss_pred CCCCCCCCCCCCCCCccccccCCCCCCCCccccccccCCCCCCCCCCCCccchhhhhccccCCCCcccccchhhhhcccc
Q 000226 1225 GAHCNRGISGDIHEPHRVQKESGVDQDPSYKEADQFLSSSESVSYKPEPQESGKLVRRALSDGEFPKMADLSDTLDAAWT 1304 (1832)
Q Consensus 1225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~~~~~~~~~~e~~~~~rr~~~~~~~~~~~~~s~~~d~~~~ 1304 (1832)
.++++...........+.+.+.. ... ......+....+.....+..+.++.+.+... .....+.+.++++|.
T Consensus 1064 --~~~~~s~~~~~~~~~lp~~~~s~----~~d-~~~~~~~~~~~~~~s~~~~~~~v~n~~s~~~-~~~~~~~~~l~~~~~ 1135 (1598)
T KOG0230|consen 1064 --LTDSSSDVSSLEHLNLPLPEDSN----STD-TGLSGPSEVLEDNESIDEMLGSVRNTYSLAN-KVRKILKQILDSATI 1135 (1598)
T ss_pred --ccccccccCccccccCCCCCccc----ccc-hhccCcccccccccchhhcccccccccchhh-HHHHHHHHhcccccc
Confidence 00010000000000000000000 000 0000000000000000111122222222211 123345566666676
Q ss_pred CCCCCCcccCccCCCCCCCCCccccccccccccccccccCCceeeeccCccccccCCCCCCCcccccCCCchhhhh-hhc
Q 000226 1305 GENHPANVIGKESGYSLPDPTLVDSSSKLNSVAASTAEQGGLEVVRSLSSVSSTKGTENMTNSRSLVGMPFSSFYS-SFN 1383 (1832)
Q Consensus 1305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~ 1383 (1832)
+.+..+..+| .......+ + .+. .....+- ...+...|++.||.+++. ...
T Consensus 1136 g~r~~~~~~P------------------~s~~~~~~-~-------~~~-~~~~~~~--~e~~~~~~~e~~~~~~~~~~~~ 1186 (1598)
T KOG0230|consen 1136 GNRANPKSSP------------------FSGQDHST-D-------LPL-ESNPIHV--LEKELSSWIEDPLTNMYYREAT 1186 (1598)
T ss_pred cccccCCCCC------------------Cchhhhcc-c-------ccc-ccCCccc--cccccHHHHhhhhhhHhHHHHH
Confidence 6543311111 00000000 0 000 0000010 112456799999998765 554
Q ss_pred ccCcccccccc-cccCCCcccCcchhhhhccCccccccCCCCCceeeecCCCchhhhhhccCChhHHHHHHHHHHhhhhh
Q 000226 1384 KNSSLNAQKLT-VSEYNPTYVMSLWDSERLSGARLFLPVGVNDTIVPVYDDEPTSVIVYTLVSSDYHVQISEFERAKDAA 1462 (1832)
Q Consensus 1384 ~~~~~~~~k~~-l~~~~p~~~s~~~~~~~~~~~~l~~P~~~~d~~V~V~edEPSSiIAyaLsS~dY~~~l~~~~~~~~~~ 1462 (1832)
+......++.. .....|+++++......+.+++|++|++.+|.+|+||||||+|+|||||++++|..+..+.
T Consensus 1187 ~e~~lns~~~~~~~~~~~k~~~s~~~s~~~~~~rLl~p~~~ndl~vp~~edpp~s~ia~al~s~~~~~q~~~p------- 1259 (1598)
T KOG0230|consen 1187 KELSLNSQKNSAETKEPPKYPSSESESEPESSSRLLLPLGLNDLVVPVYEDPPPSLIAYALSSKERINQESSP------- 1259 (1598)
T ss_pred HHHHhhcchhhcccccCCcCcccccccccccccceeccccCCcccCCcccCCCchhhhhhhcchhhccCCCCC-------
Confidence 44444445543 2367788888876666688999999999999999999999999999999998877554220
Q ss_pred hhccccccccccccccccccCCCCccccccccccccccc---ccCCCCCCCCCCCCcc--CCCceeEEEecCCCCCccee
Q 000226 1463 DSAAASAIFDSVNLLSVSSFDDTTSDRDKSLGSADEAVF---STSGSRGSQVLDPLSY--TKDLHARISFTDDGLLGKVK 1537 (1832)
Q Consensus 1463 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~---~~~~~~~~~~~~~~~~--~~~~h~~~~f~~~~~~~~~~ 1537 (1832)
..+.....+ + .....++. ..+.+.-+... .+.++......+.+.. ....|++++|.+ |+++
T Consensus 1260 --~~sis~~~S-~------~~~~~s~~-~e~~~~~~~sl~~s~l~~s~~~~~e~l~~~~~~~~~h~~~~f~e----gk~k 1325 (1598)
T KOG0230|consen 1260 --GLSISFSLS-N------LQGRLSKI-SEFDDTKSESLDNSGLESSSYRRGENLQKSKLETRTHLEYQFSE----GKAK 1325 (1598)
T ss_pred --Ccccccccc-c------cccchhhh-hhhhhhhhccccccccchhhhcchhhccccccccccceeeeccC----CceE
Confidence 000000000 0 00000000 00000000000 1111111111222222 445788888877 5699
Q ss_pred EEEEEcCHHHHHHHHHHcCCChHHHHHhhcccccCccCCCCcceeEEEecCCcEEEeccCHHHHHHHHHHhHHHHHHHHh
Q 000226 1538 YTVTCYFAKRFDALRRMCCHSELDFIRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVPKTELESFIKFGPAYFKYLSE 1617 (1832)
Q Consensus 1538 ~~~~~y~p~~F~~LR~~~~~~~~~f~~Sl~~~~~~~~~gGKSgs~F~~T~D~rfiiKtis~~E~~~f~~~~p~Yf~y~~~ 1617 (1832)
|+|++|||++|++||+.||.++++||+||+||.+|.++||||||+|+||.|+|||||+|++.|+++|++|||+||+||.+
T Consensus 1326 ~svk~~yAe~F~~LR~~c~~sEe~fIrSLsRc~~W~aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFkYl~~ 1405 (1598)
T KOG0230|consen 1326 YSVKCYYAEQFRALRKICCPSEEDFIRSLSRCVKWEAQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFKYLTE 1405 (1598)
T ss_pred EEEEEEehhhHHHHHHhhCchHHHHHHHHhcCcccccCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCceeeeeeeEEEEeeeccCCCceEEEEEeeeecccCCCccceeeeCCCCcccccccCCCCCcccccchhhhhhC
Q 000226 1618 SISTGSPTCLAKILGIYQVASKHFKGGKESKMDLLVMENLLFRRNITRLYDLKGSSRSRYNADTSGSNKVLLDQNLIEAM 1697 (1832)
Q Consensus 1618 ~~~~~~~TlL~ki~G~y~v~~~~~~~g~~~k~~~iVMeNlf~~~~i~~~yDLKGS~~~R~~~~~~~~~~vl~D~n~~~~~ 1697 (1832)
+++++.||+||||||+|||.+|+.++|++.||++||||||||+++++|+||||||+|||+++.+++.+.||||+||++++
T Consensus 1406 s~~~~~PT~LAKIlGiyqV~vK~~~sgke~K~DvmVMENLfY~r~vsRifDLKGS~RnR~v~~t~~~d~VLLDeNlVe~~ 1485 (1598)
T KOG0230|consen 1406 SISQKSPTCLAKILGIYQVSVKSPKSGKETKMDVMVMENLFYGRKVSRIFDLKGSLRNRYVPTTSGADEVLLDENLVEMM 1485 (1598)
T ss_pred HHhcCCcchhhhhheeEEEEEecCCCCceeEeeeeeehhhhhccccceeeeccchhhhccCCCCCCCceEEecHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCeeeChHHHHHHHHHHHhhHHHHhhcCccccceeEeeecccceeeeehhhhhhccchhhHHHHhhhhhcccCCCCCC
Q 000226 1698 PTSPIFVGSKAKRLLERAVWNDTAFLASIDVMDYSLLVGIDEEKHELVLGIIDFMRQYTWDKHLETWVKTSGILGGPKNT 1777 (1832)
Q Consensus 1698 ~~~~i~l~~~~k~~L~~~l~~Dt~FL~~~nvMDYSLLvGi~~~~~~l~~GIID~L~~yt~~KklE~~~K~~~~l~g~~~~ 1777 (1832)
+++||||++++|+.|.++|||||.||+++||||||||||||+++++||+||||||||||||||||+|||..| +||+++.
T Consensus 1486 ~~sPIfV~~~sK~lL~~aiwNDT~FLas~~VMDYSLLVGvD~e~~ELvlGIIDfiRtYTWDKkLESWVK~sG-l~gpk~~ 1564 (1598)
T KOG0230|consen 1486 WTSPIYVGSHSKRLLRRAIWNDTSFLASINVMDYSLLVGVDDENNELVLGIIDFIRTYTWDKKLESWVKSSG-LGGPKNK 1564 (1598)
T ss_pred hcCCeeehHhHHHHHHHHHhcchHHhhhcccceeeeEEEeeCCCCeEEEEehHhhhhhhhhhhhhhheeccc-cccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 6888999
Q ss_pred CCcccChHHHHHHHHHHHHHhcccCCCccCCCcc
Q 000226 1778 SPTVISPQQYKKRFRKAMTTYFLMLPEQWTPPSI 1811 (1832)
Q Consensus 1778 ~~Tvv~P~~Y~~RF~~~m~~~f~~vp~~W~~~~~ 1811 (1832)
.||||+|++|++||++||++|||+|||+|+++|.
T Consensus 1565 ~PTVVSP~qYK~RFRkAMd~YfL~VPD~Wtg~g~ 1598 (1598)
T KOG0230|consen 1565 QPTVVSPEQYKTRFRKAMDTYFLMVPDQWTGLGV 1598 (1598)
T ss_pred CCceeCHHHHHHHHHHHHhheeeecCCcccCCCC
Confidence 9999999999999999999999999999999863
|
|
| >COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate | Back alignment and domain information |
|---|
| >smart00330 PIPKc Phosphatidylinositol phosphate kinases | Back alignment and domain information |
|---|
| >KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PLN03185 phosphatidylinositol phosphate kinase; Provisional | Back alignment and domain information |
|---|
| >PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in [] | Back alignment and domain information |
|---|
| >TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit | Back alignment and domain information |
|---|
| >KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02339 thermosome_arch thermosome, various subunits, archaeal | Back alignment and domain information |
|---|
| >cd03343 cpn60 cpn60 chaperonin family | Back alignment and domain information |
|---|
| >cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit | Back alignment and domain information |
|---|
| >cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit | Back alignment and domain information |
|---|
| >PTZ00212 T-complex protein 1 subunit beta; Provisional | Back alignment and domain information |
|---|
| >TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit | Back alignment and domain information |
|---|
| >cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit | Back alignment and domain information |
|---|
| >cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1 | Back alignment and domain information |
|---|
| >TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit | Back alignment and domain information |
|---|
| >cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit | Back alignment and domain information |
|---|
| >cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit | Back alignment and domain information |
|---|
| >TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit | Back alignment and domain information |
|---|
| >TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit | Back alignment and domain information |
|---|
| >TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit | Back alignment and domain information |
|---|
| >cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit | Back alignment and domain information |
|---|
| >TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit | Back alignment and domain information |
|---|
| >cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit | Back alignment and domain information |
|---|
| >KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit | Back alignment and domain information |
|---|
| >cd00309 chaperonin_type_I_II chaperonin families, type I and type II | Back alignment and domain information |
|---|
| >KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit | Back alignment and domain information |
|---|
| >PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism | Back alignment and domain information |
|---|
| >COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK00013 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PRK12849 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PTZ00114 Heat shock protein 60; Provisional | Back alignment and domain information |
|---|
| >PRK12851 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >TIGR02348 GroEL chaperonin GroL | Back alignment and domain information |
|---|
| >cd03344 GroEL GroEL_like type I chaperonin | Back alignment and domain information |
|---|
| >PRK12850 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >PRK12852 groEL chaperonin GroEL; Reviewed | Back alignment and domain information |
|---|
| >CHL00093 groEL chaperonin GroEL | Back alignment and domain information |
|---|
| >PRK14104 chaperonin GroEL; Provisional | Back alignment and domain information |
|---|
| >cd03333 chaperonin_like chaperonin_like superfamily | Back alignment and domain information |
|---|
| >PLN03167 Chaperonin-60 beta subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >KOG1729 consensus FYVE finger containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1819 consensus FYVE finger-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >KOG1842 consensus FYVE finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1841 consensus Smad anchor for receptor activation [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG1843 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1811 consensus Predicted Zn2+-binding protein, contains FYVE domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A | Back alignment and domain information |
|---|
| >KOG1729 consensus FYVE finger containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1841 consensus Smad anchor for receptor activation [Defense mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1832 | ||||
| 1q3s_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 2e-19 | ||
| 1q3r_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 2e-19 | ||
| 1q2v_A | 548 | Crystal Structure Of The Chaperonin From Thermococc | 2e-19 | ||
| 3iyg_G | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 1e-18 | ||
| 3p9d_C | 590 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 8e-17 | ||
| 3ko1_A | 553 | Cystal Structure Of Thermosome From Acidianus Tengc | 2e-15 | ||
| 1gml_A | 178 | Crystal Structure Of The Mouse Cct Gamma Apical Dom | 8e-15 | ||
| 1a6d_A | 545 | Thermosome From T. Acidophilum Length = 545 | 1e-14 | ||
| 3izh_A | 513 | Mm-Cpn D386a With Atp Length = 513 | 2e-12 | ||
| 3los_A | 543 | Atomic Model Of Mm-Cpn In The Closed State Length = | 2e-12 | ||
| 3rus_A | 543 | Crystal Structure Of Cpn-Rls In Complex With Adp Fr | 3e-12 | ||
| 3izi_A | 513 | Mm-Cpn Rls With Atp Length = 513 | 3e-12 | ||
| 1a6d_B | 543 | Thermosome From T. Acidophilum Length = 543 | 1e-11 | ||
| 3aq1_B | 500 | Open State Monomer Of A Group Ii Chaperonin From Me | 2e-11 | ||
| 3j02_A | 491 | Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Boun | 5e-11 | ||
| 3izn_A | 491 | Mm-Cpn Deltalid With Atp Length = 491 | 7e-11 | ||
| 3izk_A | 491 | Mm-Cpn Rls Deltalid With Atp Length = 491 | 7e-11 | ||
| 3iyf_A | 521 | Atomic Model Of The Lidless Mm-Cpn In The Open Stat | 8e-11 | ||
| 1ass_A | 159 | Apical Domain Of The Chaperonin From Thermoplasma A | 1e-10 | ||
| 2gk9_A | 392 | Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty | 6e-10 | ||
| 1bo1_A | 416 | Phosphatidylinositol Phosphate Kinase Type Ii Beta | 7e-10 | ||
| 2ybx_A | 394 | Crystal Structure Of Human Phosphatidylinositol-5-P | 1e-09 | ||
| 1dvp_A | 220 | Crystal Structure Of The Vhs And Fyve Tandem Domain | 2e-08 | ||
| 3iyg_E | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 2e-08 | ||
| 1e0r_B | 159 | Beta-Apical Domain Of Thermosome Length = 159 | 4e-08 | ||
| 3t7l_A | 90 | Crystal Structure Of The Fyve Domain Of Endofin (Zf | 3e-07 | ||
| 1hyi_A | 65 | Solution Structure Of The Eea1 Fyve Domain Complexe | 3e-07 | ||
| 1joc_A | 125 | Eea1 Homodimer Of C-Terminal Fyve Domain Bound To I | 5e-07 | ||
| 3p9d_F | 546 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 5e-07 | ||
| 3zyq_A | 226 | Crystal Structure Of The Tandem Vhs And Fyve Domain | 1e-06 | ||
| 1z2q_A | 84 | High-Resolution Solution Structure Of The Lm5-1 Fyv | 2e-06 | ||
| 3iyg_D | 518 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 2e-06 | ||
| 1vfy_A | 73 | Phosphatidylinositol-3-Phosphate Binding Fyve Domai | 4e-06 | ||
| 3p9d_B | 527 | The Crystal Structure Of Yeast Cct Reveals Intrinsi | 4e-05 | ||
| 3mpx_A | 434 | Crystal Structure Of The Dh And Ph-1 Domains Of Hum | 1e-04 | ||
| 2yqm_A | 89 | Solution Structure Of The Fyve Domain In Zinc Finge | 1e-04 | ||
| 3iyg_H | 515 | Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST | 2e-04 | ||
| 2yw8_A | 82 | Crystal Structure Of Human Run And Fyve Domain-Cont | 2e-04 |
| >pdb|1Q3S|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Formiii Crystal Complexed With Adp) Length = 548 | Back alignment and structure |
|
| >pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form Of Single Mutant) Length = 548 | Back alignment and structure |
| >pdb|1Q2V|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form) Length = 548 | Back alignment and structure |
| >pdb|3IYG|G Chain G, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
| >pdb|3P9D|C Chain C, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 590 | Back alignment and structure |
| >pdb|3KO1|A Chain A, Cystal Structure Of Thermosome From Acidianus Tengchongensis Strain S5 Length = 553 | Back alignment and structure |
| >pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain (Triclinic) Length = 178 | Back alignment and structure |
| >pdb|1A6D|A Chain A, Thermosome From T. Acidophilum Length = 545 | Back alignment and structure |
| >pdb|3IZH|A Chain A, Mm-Cpn D386a With Atp Length = 513 | Back alignment and structure |
| >pdb|3LOS|A Chain A, Atomic Model Of Mm-Cpn In The Closed State Length = 543 | Back alignment and structure |
| >pdb|3RUS|A Chain A, Crystal Structure Of Cpn-Rls In Complex With Adp From Methanococcus Maripaludis Length = 543 | Back alignment and structure |
| >pdb|3IZI|A Chain A, Mm-Cpn Rls With Atp Length = 513 | Back alignment and structure |
| >pdb|1A6D|B Chain B, Thermosome From T. Acidophilum Length = 543 | Back alignment and structure |
| >pdb|3AQ1|B Chain B, Open State Monomer Of A Group Ii Chaperonin From Methanococcoides Burtonii Length = 500 | Back alignment and structure |
| >pdb|3J02|A Chain A, Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Bound State Length = 491 | Back alignment and structure |
| >pdb|3IZN|A Chain A, Mm-Cpn Deltalid With Atp Length = 491 | Back alignment and structure |
| >pdb|3IZK|A Chain A, Mm-Cpn Rls Deltalid With Atp Length = 491 | Back alignment and structure |
| >pdb|3IYF|A Chain A, Atomic Model Of The Lidless Mm-Cpn In The Open State Length = 521 | Back alignment and structure |
| >pdb|1ASS|A Chain A, Apical Domain Of The Chaperonin From Thermoplasma Acidophilum Length = 159 | Back alignment and structure |
| >pdb|2GK9|A Chain A, Human Phosphatidylinositol-4-Phosphate 5-Kinase, Type Ii, Gamma Length = 392 | Back alignment and structure |
| >pdb|1BO1|A Chain A, Phosphatidylinositol Phosphate Kinase Type Ii Beta Length = 416 | Back alignment and structure |
| >pdb|2YBX|A Chain A, Crystal Structure Of Human Phosphatidylinositol-5-Phosphate 4-Kinase Type-2 Alpha Length = 394 | Back alignment and structure |
| >pdb|1DVP|A Chain A, Crystal Structure Of The Vhs And Fyve Tandem Domains Of Hrs, A Protein Involved In Membrane Trafficking And Signal Transduction Length = 220 | Back alignment and structure |
| >pdb|3IYG|E Chain E, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
| >pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome Length = 159 | Back alignment and structure |
| >pdb|3T7L|A Chain A, Crystal Structure Of The Fyve Domain Of Endofin (Zfyve16) At 1.1a Resolution Length = 90 | Back alignment and structure |
| >pdb|1HYI|A Chain A, Solution Structure Of The Eea1 Fyve Domain Complexed With Inositol 1,3-Bisphosphate Length = 65 | Back alignment and structure |
| >pdb|1JOC|A Chain A, Eea1 Homodimer Of C-Terminal Fyve Domain Bound To Inositol 1,3-Diphosphate Length = 125 | Back alignment and structure |
| >pdb|3P9D|F Chain F, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 546 | Back alignment and structure |
| >pdb|3ZYQ|A Chain A, Crystal Structure Of The Tandem Vhs And Fyve Domains Of Hepatocyte Growth Factor-Regulated Tyrosine Kinase Substrate (Hgs-Hrs) At 1.48 A Resolution Length = 226 | Back alignment and structure |
| >pdb|1Z2Q|A Chain A, High-Resolution Solution Structure Of The Lm5-1 Fyve Domain From Leishmania Major Length = 84 | Back alignment and structure |
| >pdb|3IYG|D Chain D, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 518 | Back alignment and structure |
| >pdb|1VFY|A Chain A, Phosphatidylinositol-3-Phosphate Binding Fyve Domain Of Vps27p Protein From Saccharomyces Cerevisiae Length = 73 | Back alignment and structure |
| >pdb|3P9D|B Chain B, The Crystal Structure Of Yeast Cct Reveals Intrinsic Asymmetry Of Eukaryotic Cytosolic Chaperonins Length = 527 | Back alignment and structure |
| >pdb|3MPX|A Chain A, Crystal Structure Of The Dh And Ph-1 Domains Of Human Fgd5 Length = 434 | Back alignment and structure |
| >pdb|2YQM|A Chain A, Solution Structure Of The Fyve Domain In Zinc Finger Fyve Domain-Containing Protein 12 Length = 89 | Back alignment and structure |
| >pdb|3IYG|H Chain H, Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGSTROM Cryo-Em Map Length = 515 | Back alignment and structure |
| >pdb|2YW8|A Chain A, Crystal Structure Of Human Run And Fyve Domain-Containing Protein Length = 82 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1832 | |||
| 2ybx_A | 394 | Phosphatidylinositol-5-phosphate 4-kinase type-2; | 5e-48 | |
| 2gk9_A | 392 | Phosphatidylinositol-4-phosphate 5-kinase, type II | 2e-47 | |
| 2gk9_A | 392 | Phosphatidylinositol-4-phosphate 5-kinase, type II | 1e-08 | |
| 1gml_A | 178 | T-complex protein 1 subunit gamma; chaperone, chap | 2e-46 | |
| 3aq1_B | 500 | Thermosome subunit; group II chaperonin, protein f | 2e-40 | |
| 3ruv_A | 543 | Chaperonin, CPN; double-ring, protein folding mach | 5e-38 | |
| 3iyg_G | 515 | T-complex protein 1 subunit gamma; TRIC/CCT, asymm | 7e-38 | |
| 3iyg_E | 515 | T-complex protein 1 subunit; TRIC/CCT, asymmetric, | 7e-38 | |
| 1a6d_A | 545 | Thermosome (alpha subunit); group II chaperonin, C | 1e-37 | |
| 1a6d_B | 543 | Thermosome (beta subunit); group II chaperonin, CC | 4e-37 | |
| 1q3q_A | 548 | Thermosome alpha subunit; chaperone, chaperonin; H | 5e-37 | |
| 3ko1_A | 553 | Chaperonin; 9-fold symmetry, double ring, ATP hydr | 5e-37 | |
| 3iyg_A | 529 | T-complex protein 1 subunit alpha; TRIC/CCT, asymm | 9e-37 | |
| 3iyg_H | 515 | T-complex protein 1 subunit ETA; TRIC/CCT, asymmet | 1e-36 | |
| 3p9d_G | 550 | T-complex protein 1 subunit ETA; HSP60, eukaryotic | 4e-36 | |
| 3p9d_A | 559 | T-complex protein 1 subunit alpha; HSP60, eukaryot | 8e-36 | |
| 3p9d_E | 562 | T-complex protein 1 subunit epsilon; HSP60, eukary | 3e-35 | |
| 3p9d_B | 527 | T-complex protein 1 subunit beta; HSP60, eukaryoti | 4e-35 | |
| 3p9d_H | 568 | T-complex protein 1 subunit theta; HSP60, eukaryot | 1e-34 | |
| 3iyg_B | 513 | T-complex protein 1 subunit beta; TRIC/CCT, asymme | 2e-34 | |
| 3iyg_Q | 512 | T-complex protein 1 subunit theta; TRIC/CCT, asymm | 6e-34 | |
| 3p9d_F | 546 | T-complex protein 1 subunit zeta; HSP60, eukaryoti | 1e-33 | |
| 3iyg_Z | 517 | T-complex protein 1 subunit zeta; TRIC/CCT, asymme | 4e-33 | |
| 3p9d_C | 590 | T-complex protein 1 subunit gamma; HSP60, eukaryot | 3e-32 | |
| 3iyg_D | 518 | T-complex protein 1 subunit delta; TRIC/CCT, asymm | 3e-32 | |
| 3p9d_D | 528 | T-complex protein 1 subunit delta; HSP60, eukaryot | 1e-31 | |
| 1ass_A | 159 | Thermosome; chaperonin, HSP60, TCP1, groel, thermo | 2e-30 | |
| 1x4u_A | 84 | Zinc finger, FYVE domain containing 27 isoform B; | 8e-29 | |
| 1z2q_A | 84 | LM5-1; membrane protein, FYVE domain, zinc-finger; | 7e-28 | |
| 3t7l_A | 90 | Zinc finger FYVE domain-containing protein 16; str | 2e-25 | |
| 2yw8_A | 82 | RUN and FYVE domain-containing protein 1; structur | 1e-24 | |
| 1joc_A | 125 | EEA1, early endosomal autoantigen 1; FYVE domain, | 8e-24 | |
| 1vfy_A | 73 | Phosphatidylinositol-3-phosphate binding FYVE doma | 1e-23 | |
| 1wfk_A | 88 | Zinc finger, FYVE domain containing 19; riken stru | 6e-22 | |
| 1dvp_A | 220 | HRS, hepatocyte growth factor-regulated tyrosine k | 1e-18 | |
| 3zyq_A | 226 | Hepatocyte growth factor-regulated tyrosine kinas | 7e-16 | |
| 3mpx_A | 434 | FYVE, rhogef and PH domain-containing protein 5; s | 1e-14 | |
| 1y02_A | 120 | CARP2, FYVE-ring finger protein sakura; zinc-bindi | 4e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 9e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 2vrw_B | 406 | P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP | 1e-07 | |
| 1zbd_B | 134 | Rabphilin-3A; G protein, effector, RABCDR, synapti | 5e-06 | |
| 3ky9_A | 587 | Proto-oncogene VAV; calponin homology domain, DBL | 3e-04 | |
| 2zet_C | 153 | Melanophilin; complex, GTP-binding protein, GTPase | 4e-04 |
| >2ybx_A Phosphatidylinositol-5-phosphate 4-kinase type-2; transferase, signalling; HET: PHD; 2.56A {Homo sapiens} PDB: 1bo1_A Length = 394 | Back alignment and structure |
|---|
Score = 176 bits (447), Expect = 5e-48
Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 16/249 (6%)
Query: 1499 AVFSTSGSRGSQVLDP---LSYTKDLHARISFTDDGLLGKVKYTVTCYFAKRFDALRRMC 1555
++ S + +L P +Y+K F + + Y F LR
Sbjct: 37 SINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKEN--MPSHFKFKEYCPMVFRNLRERF 94
Query: 1556 CHSELDFIRSLSRCKKWGAQ-GGKSNVFFAKTLDDRFIIKQVPKTELESFIKFGPAYFKY 1614
+ DF SL+R +S F + D R+IIK + ++ Y +Y
Sbjct: 95 GIDDQDFQNSLTRSAPLPNDSQARSGARFHTSYDKRYIIKTITSEDVAEMHNILKKYHQY 154
Query: 1615 LSESISTGSPTCLAKILGIYQVASKHFKGGKESKMDLLVMENLLF-RRNITRLYDLKGSS 1673
+ E T L + LG+Y++ ++ ++V N+ R ++ R YDLKGS+
Sbjct: 155 IVEC---HGITLLPQFLGMYRLNVDG------VEIYVIVTRNVFSHRLSVYRKYDLKGST 205
Query: 1674 RSRYNADTSGSNKVLLDQNLIEAMPTSPIFVGSKAKRLLERAVWNDTAFLASIDVMDYSL 1733
+R +D + ++ ++ I++ K++ + D FLA + +MDYSL
Sbjct: 206 VAREASDKEKAKELPTLKDNDFINEGQKIYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSL 265
Query: 1734 LVGIDEEKH 1742
LVGI + +
Sbjct: 266 LVGIHDVER 274
|
| >2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 | Back alignment and structure |
|---|
| >2gk9_A Phosphatidylinositol-4-phosphate 5-kinase, type II, gamma; phosphoinositide, structural genomics, structural genomics consortium, SGC, transferase; 2.80A {Homo sapiens} Length = 392 | Back alignment and structure |
|---|
| >1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A Length = 178 | Back alignment and structure |
|---|
| >3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii} Length = 500 | Back alignment and structure |
|---|
| >3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A Length = 543 | Back alignment and structure |
|---|
| >3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A* Length = 545 | Back alignment and structure |
|---|
| >1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B Length = 543 | Back alignment and structure |
|---|
| >1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A Length = 548 | Back alignment and structure |
|---|
| >3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis} Length = 553 | Back alignment and structure |
|---|
| >3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 529 | Back alignment and structure |
|---|
| >3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 515 | Back alignment and structure |
|---|
| >3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* Length = 550 | Back alignment and structure |
|---|
| >3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* Length = 559 | Back alignment and structure |
|---|
| >3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* Length = 562 | Back alignment and structure |
|---|
| >3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* Length = 527 | Back alignment and structure |
|---|
| >3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* Length = 568 | Back alignment and structure |
|---|
| >3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A Length = 513 | Back alignment and structure |
|---|
| >3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 512 | Back alignment and structure |
|---|
| >3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* Length = 546 | Back alignment and structure |
|---|
| >3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 517 | Back alignment and structure |
|---|
| >3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 2bbm_B 2bbn_B Length = 590 | Back alignment and structure |
|---|
| >3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} Length = 518 | Back alignment and structure |
|---|
| >3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* Length = 528 | Back alignment and structure |
|---|
| >1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A Length = 159 | Back alignment and structure |
|---|
| >1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 84 | Back alignment and structure |
|---|
| >1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major} Length = 84 | Back alignment and structure |
|---|
| >3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens} Length = 90 | Back alignment and structure |
|---|
| >2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A Length = 82 | Back alignment and structure |
|---|
| >1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A Length = 125 | Back alignment and structure |
|---|
| >1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1 Length = 73 | Back alignment and structure |
|---|
| >1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1 Length = 88 | Back alignment and structure |
|---|
| >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 Length = 220 | Back alignment and structure |
|---|
| >3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A* Length = 226 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Length = 434 | Back alignment and structure |
|---|
| >1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1 Length = 120 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406 | Back alignment and structure |
|---|
| >1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1 Length = 134 | Back alignment and structure |
|---|
| >3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A Length = 587 | Back alignment and structure |
|---|
| >2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus} Length = 153 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1832 | ||||
| d1bo1a_ | 383 | d.143.1.2 (A:) Phosphatidylinositol phosphate kina | 7e-49 | |
| d1bo1a_ | 383 | d.143.1.2 (A:) Phosphatidylinositol phosphate kina | 3e-12 | |
| d1gmla_ | 168 | c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musc | 1e-35 | |
| d1q3qa2 | 153 | c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon | 1e-34 | |
| d1a6db2 | 152 | c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon | 6e-33 | |
| d1assa_ | 152 | c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermo | 1e-31 | |
| d1joca1 | 64 | g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) | 9e-19 | |
| d1vfya_ | 67 | g.50.1.1 (A:) vps27p protein {Baker's yeast (Sacch | 3e-18 | |
| d1dvpa2 | 72 | g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila me | 5e-18 | |
| d1wfka_ | 88 | g.50.1.1 (A:) Zinc finger FYVE domain containing p | 1e-15 | |
| d1y02a2 | 51 | g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger pro | 1e-14 | |
| d1zbdb_ | 124 | g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat | 2e-12 |
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (450), Expect = 7e-49
Identities = 57/228 (25%), Positives = 96/228 (42%), Gaps = 17/228 (7%)
Query: 1516 SYTKDLHARISFTDDGLLGKVKYTVTCYFAKRFDALRRMCCHSELDFIRSLSRCKKWGAQ 1575
+Y+K F + L + K+ Y F LR + D+ S++R +
Sbjct: 40 AYSKIKVDNHLFNKENLPSRFKFKE--YCPMVFRNLRERFGIDDQDYQNSVTRSAPINSD 97
Query: 1576 G-GKSNVFFAKTLDDRFIIKQVPKTELESFIKFGPAYFKYLSESISTGSPTCLAKILGIY 1634
G+ F T D RF+IK V ++ Y +++ E T L + LG+Y
Sbjct: 98 SQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQFIVEC---HGNTLLPQFLGMY 154
Query: 1635 QVASKHFKGGKESKMDLLVMENLLFRR-NITRLYDLKGSSRSRYNADTSG--SNKVLLDQ 1691
++ + ++V N+ R + R YDLKGS+ +R +D D
Sbjct: 155 RLTVDG------VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKDN 208
Query: 1692 NLIEAMPTSPIFVGSKAKRLLERAVWNDTAFLASIDVMDYSLLVGIDE 1739
+ + + VG ++K+ + D FLA + +MDYSLLVGI +
Sbjct: 209 DFLNE--GQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHD 254
|
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
| >d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} Length = 168 | Back information, alignment and structure |
|---|
| >d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} Length = 153 | Back information, alignment and structure |
|---|
| >d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} Length = 152 | Back information, alignment and structure |
|---|
| >d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} Length = 152 | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} Length = 64 | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67 | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 72 | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1832 | |||
| d1bo1a_ | 383 | Phosphatidylinositol phosphate kinase IIbeta, PIPK | 100.0 | |
| d1gmla_ | 168 | Thermosome, A-domain {Mouse (Mus musculus), gamma | 100.0 | |
| d1q3qa2 | 153 | Thermosome, A-domain {Archaeon Thermococcus sp. ks | 99.96 | |
| d1assa_ | 152 | Thermosome, A-domain {Archaeon Thermoplasma acidop | 99.96 | |
| d1a6db2 | 152 | Thermosome, A-domain {Archaeon Thermoplasma acidop | 99.96 | |
| d1joca1 | 64 | Eea1 {Human (Homo sapiens) [TaxId: 9606]} | 99.45 | |
| d1wfka_ | 88 | Zinc finger FYVE domain containing protein 19 {Mou | 99.41 | |
| d1dvpa2 | 72 | Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7 | 99.37 | |
| d1vfya_ | 67 | vps27p protein {Baker's yeast (Saccharomyces cerev | 99.3 | |
| d1sjpa2 | 184 | GroEL, A domain {Mycobacterium tuberculosis, GroEL | 98.91 | |
| d1kida_ | 193 | GroEL, A domain {Escherichia coli [TaxId: 562]} | 98.91 | |
| d1q3qa3 | 107 | Thermosome, I domain {Archaeon Thermococcus sp. ks | 98.89 | |
| d1ioka2 | 176 | GroEL, A domain {Paracoccus denitrificans [TaxId: | 98.88 | |
| d1srva_ | 145 | GroEL, A domain {Thermus thermophilus [TaxId: 274] | 98.77 | |
| d1a6da3 | 105 | Thermosome, I domain {Archaeon Thermoplasma acidop | 98.71 | |
| d1a6db3 | 107 | Thermosome, I domain {Archaeon Thermoplasma acidop | 98.67 | |
| d1y02a2 | 51 | Rififylin (FYVE-RING finger protein Sakura) {Human | 98.54 | |
| d1zbdb_ | 124 | Effector domain of rabphilin-3a {Rat (Rattus norve | 98.32 | |
| d1q3qa1 | 258 | Thermosome, E domain {Archaeon Thermococcus sp. ks | 97.68 | |
| d1a6db1 | 243 | Thermosome, E domain {Archaeon Thermoplasma acidop | 97.66 | |
| d1sjpa1 | 180 | GroEL, E domain {Mycobacterium tuberculosis, GroEL | 97.55 | |
| d1a6da1 | 245 | Thermosome, E domain {Archaeon Thermoplasma acidop | 97.53 | |
| d1kp8a1 | 252 | GroEL, E domain {Escherichia coli [TaxId: 562]} | 97.2 | |
| d1ioka1 | 252 | GroEL, E domain {Paracoccus denitrificans [TaxId: | 96.46 | |
| d1we3a1 | 255 | GroEL, E domain {Thermus thermophilus [TaxId: 274] | 95.25 | |
| d1w2fa_ | 276 | Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {H | 88.68 | |
| d1sjpa3 | 89 | GroEL, I domain {Mycobacterium tuberculosis, GroEL | 85.71 |
| >d1bo1a_ d.143.1.2 (A:) Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: SAICAR synthase-like superfamily: SAICAR synthase-like family: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta domain: Phosphatidylinositol phosphate kinase IIbeta, PIPK IIbeta species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=538.01 Aligned_cols=252 Identities=27% Similarity=0.474 Sum_probs=227.5
Q ss_pred CEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCC-CCCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 3249999938999999998809996889996312555766-899753149974178389850699999999998699999
Q 000226 1535 KVKYTVTCYFAKRFDALRRMCCHSELDFIRSLSRCKKWGA-QGGKSNVFFAKTLDDRFIIKQVPKTELESFIKFGPAYFK 1613 (1832)
Q Consensus 1535 ~~~~~~~~y~p~~F~~LR~~~~~~~~~~~~SL~~~~~~~~-~gGKSgs~F~~T~D~rfiiKti~~~E~~~f~~~~p~Yf~ 1613 (1832)
..+|+||+|||.+|++||++||+++.+|+.||+++..|.. ++|||||+||+|.|+|||||||++.|++.|+++||.||.
T Consensus 57 ~~~fkfk~Y~P~vF~~lR~~fgi~~~dy~~Sl~~~~~~~~~s~GkSGs~F~~t~D~rfiiKti~~~E~~~l~~~l~~Y~~ 136 (383)
T d1bo1a_ 57 PSRFKFKEYCPMVFRNLRERFGIDDQDYQNSVTRSAPINSDSQGRCGTRFLTTYDRRFVIKTVSSEDVAEMHNILKKYHQ 136 (383)
T ss_dssp CSEEEEEEECHHHHHHHHHHTTCCHHHHHHHHHSSCCEECCCC----CCEEECTTSSEEEECCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECHHHHHHHHHHHHHHHH
T ss_conf 88707998379999999998198989999972788654345657767867880699689998579999999999899999
Q ss_pred HHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEEEECCCCC-CCCCEEEECCCCCCCCCCCCCC--CCCCCCCC
Q ss_conf 99730389999301466668898642247991479997653213578-8520344078974355556888--99631132
Q 000226 1614 YLSESISTGSPTCLAKILGIYQVASKHFKGGKESKMDLLVMENLLFR-RNITRLYDLKGSSRSRYNADTS--GSNKVLLD 1690 (1832)
Q Consensus 1614 y~~~~~~~~~~TlL~ki~G~y~i~~~~~~~g~~~~~~~iVMeNlf~~-~~i~~~yDLKGS~~~R~~~~~~--~~~~vl~D 1690 (1832)
||.++ +++|||+||||+|+|+++ | .+.|||||+|+|++ ..|+++||||||+++|.+.+.+ +...||||
T Consensus 137 h~~~~---n~~TLL~k~~Gly~i~~~----~--~~~~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~~lKD 207 (383)
T d1bo1a_ 137 FIVEC---HGNTLLPQFLGMYRLTVD----G--VETYMVVTRNVFSHRLTVHRKYDLKGSTVAREASDKEKAKDLPTFKD 207 (383)
T ss_dssp HHHTT---TTCCSSCCEEEEEEEEET----T--EEEEEEEEECSSCSSSCCSEEEEECCCSSSSCSCSGGGSSSCCEECH
T ss_pred HHHHC---CCCCCHHHHHEEEEEEEC----C--CEEEEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99860---787578763430378747----9--52799998424567765103676158632567675334555204656
Q ss_pred HHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC-------------------------------
Q ss_conf 3354208999713096899999999996498772058656510475414-------------------------------
Q 000226 1691 QNLIEAMPTSPIFVGSKAKRLLERAVWNDTAFLASIDVMDYSLLVGIDE------------------------------- 1739 (1832)
Q Consensus 1691 ~n~~~~~~~~~i~l~~~~k~~l~~~l~~Dt~FL~~~nvmDYSLLvGv~~------------------------------- 1739 (1832)
+||++. ..+|+|+++.|..|+.||.+||.||+++|||||||||||+.
T Consensus 208 ~df~~~--~~~i~l~~~~k~~l~~ql~~D~~fL~~~~imDYSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (383)
T d1bo1a_ 208 NDFLNE--GQKLHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAEQEEMEVEERAEDEECENDGVGGNLLC 285 (383)
T ss_dssp HHHHHT--TCCCCCCSSHHHHHHHHHHHHHHHHHHHTCCSCCEEEEEEEHHHHHHHHHHHHHHTTTTC------------
T ss_pred HHHHHC--CCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf 778764--688230799999999999999999987786750436755122111122110011245554445555643223
Q ss_pred ----------------------------------------CCCEEEEEHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf ----------------------------------------5506643011566404224578776543021489999997
Q 000226 1740 ----------------------------------------EKHELVLGIIDFMRQYTWDKHLETWVKTSGILGGPKNTSP 1779 (1832)
Q Consensus 1740 ----------------------------------------~~~~l~~GIID~L~~yt~~KklE~~~K~~~~l~g~~~~~~ 1779 (1832)
++..||+|||||||+|||.||+||++|+. .+++ +.++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyyiGIIDiLq~Y~~~KklE~~~Ksl--~~~~-g~~I 362 (383)
T d1bo1a_ 286 SYGTPPDSPGNLLSFPRFFGPGEFDPSVDVYAMKSHESSPKKEVYFMAIIDILTPYDTKKKAAHAAKTV--KHGA-GAEI 362 (383)
T ss_dssp -----------------------CCSCCTTTSTTEEECSSTTEEEEEEECCSCC--------------------C-CCSS
T ss_pred CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHH--CCCC-CCCC
T ss_conf 457897883022215533466445777654454456789975999999997157796899999999992--1188-9896
Q ss_pred CCCCHHHHHHHHHHHHHHHCC
Q ss_conf 303947899999999987314
Q 000226 1780 TVISPQQYKKRFRKAMTTYFL 1800 (1832)
Q Consensus 1780 Tvv~P~~Y~~RF~~~m~~~f~ 1800 (1832)
|||+|++|++||++||.++|.
T Consensus 363 S~v~P~~Ya~RF~~Fi~~I~~ 383 (383)
T d1bo1a_ 363 STVNPEQYSKRFNEFMSNILT 383 (383)
T ss_dssp SCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHHHHCC
T ss_conf 127989999999999998649
|
| >d1gmla_ c.8.5.2 (A:) Thermosome, A-domain {Mouse (Mus musculus), gamma chain [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1q3qa2 c.8.5.2 (A:217-369) Thermosome, A-domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1assa_ c.8.5.2 (A:) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1a6db2 c.8.5.2 (B:216-367) Thermosome, A-domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sjpa2 c.8.5.1 (A:189-372) GroEL, A domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1kida_ c.8.5.1 (A:) GroEL, A domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1q3qa3 d.56.1.2 (A:146-216,A:370-405) Thermosome, I domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1ioka2 c.8.5.1 (A:191-366) GroEL, A domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
| >d1srva_ c.8.5.1 (A:) GroEL, A domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1a6da3 d.56.1.2 (A:146-214,A:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1a6db3 d.56.1.2 (B:145-215,B:368-403) Thermosome, I domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1q3qa1 a.129.1.2 (A:9-145,A:406-526) Thermosome, E domain {Archaeon Thermococcus sp. ks-1, alpha chain [TaxId: 79679]} | Back information, alignment and structure |
|---|
| >d1a6db1 a.129.1.2 (B:20-144,B:404-521) Thermosome, E domain {Archaeon Thermoplasma acidophilum, beta chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1sjpa1 a.129.1.1 (A:62-134,A:408-514) GroEL, E domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1a6da1 a.129.1.2 (A:17-145,A:404-519) Thermosome, E domain {Archaeon Thermoplasma acidophilum, alpha chain [TaxId: 2303]} | Back information, alignment and structure |
|---|
| >d1kp8a1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ioka1 a.129.1.1 (A:2-136,A:410-526) GroEL, E domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
| >d1we3a1 a.129.1.1 (A:3-138,A:409-527) GroEL, E domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1w2fa_ d.143.1.3 (A:) Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sjpa3 d.56.1.1 (A:135-188,A:373-407) GroEL, I domain {Mycobacterium tuberculosis, GroEL2 [TaxId: 1773]} | Back information, alignment and structure |
|---|