Citrus Sinensis ID: 000232
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1822 | 2.2.26 [Sep-21-2011] | |||||||
| F4JSZ5 | 1687 | Brefeldin A-inhibited gua | yes | no | 0.784 | 0.847 | 0.723 | 0.0 | |
| F4JN05 | 1706 | Brefeldin A-inhibited gua | no | no | 0.795 | 0.849 | 0.659 | 0.0 | |
| Q9LPC5 | 1750 | Brefeldin A-inhibited gua | no | no | 0.930 | 0.969 | 0.485 | 0.0 | |
| Q9LZX8 | 1793 | Brefeldin A-inhibited gua | no | no | 0.794 | 0.807 | 0.522 | 0.0 | |
| Q7TSU1 | 1791 | Brefeldin A-inhibited gua | yes | no | 0.802 | 0.816 | 0.332 | 0.0 | |
| A2A5R2 | 1792 | Brefeldin A-inhibited gua | yes | no | 0.799 | 0.813 | 0.333 | 0.0 | |
| Q9Y6D5 | 1785 | Brefeldin A-inhibited gua | yes | no | 0.806 | 0.823 | 0.333 | 0.0 | |
| F4IXW2 | 1739 | Brefeldin A-inhibited gua | no | no | 0.611 | 0.640 | 0.379 | 0.0 | |
| G3X9K3 | 1846 | Brefeldin A-inhibited gua | no | no | 0.791 | 0.781 | 0.331 | 0.0 | |
| D4A631 | 1846 | Brefeldin A-inhibited gua | no | no | 0.782 | 0.772 | 0.329 | 0.0 |
| >sp|F4JSZ5|BIG1_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Arabidopsis thaliana GN=BIG1 PE=2 SV=1 | Back alignment and function desciption |
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Score = 2172 bits (5627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1050/1451 (72%), Positives = 1234/1451 (85%), Gaps = 22/1451 (1%)
Query: 371 KEGEKGEGGEGQGNGGAELGGESKIREDGFLLFKNICKLSMKFSSQENPDDLILLRGKIL 430
+EG EG G SKIREDGFLLFKN+CKLSMKFSSQEN DD IL+RGK L
Sbjct: 256 EEGASSTEDEGTG---------SKIREDGFLLFKNLCKLSMKFSSQENTDDQILVRGKTL 306
Query: 431 SLELLKVVTDNGGPVWLSNARFLIAIKQFLCLSLLKNSALSVMAVFQLQCSIFMSLLSKY 490
SLELLKV+ DNGGP+WLS+ RFL AIKQ LCLSLLKNSALSVM++FQLQC+IF +LL KY
Sbjct: 307 SLELLKVIIDNGGPIWLSDERFLNAIKQLLCLSLLKNSALSVMSIFQLQCAIFTTLLRKY 366
Query: 491 RSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVD 550
RSG+K+E+GIFFPMLVLRVLENVLQPSFVQKMTVL+LLE I D +I+D+FVN+DCDV+
Sbjct: 367 RSGMKSEVGIFFPMLVLRVLENVLQPSFVQKMTVLSLLENICHDPNLIIDIFVNFDCDVE 426
Query: 551 SPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRI 610
SPNIFERIVNGLLKTALGPPPGS+T LSP QDI FR+ESVKCLVSII++MGTWMDQQL +
Sbjct: 427 SPNIFERIVNGLLKTALGPPPGSSTILSPVQDITFRHESVKCLVSIIKAMGTWMDQQLSV 486
Query: 611 GETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKG 670
G++ LPK E ++ +N+S N EDG+ D++FH ++NPE SDAATLEQRRAYKIE QKG
Sbjct: 487 GDSLLPKSLENEAPANNHSNSNEEDGTTIDHDFHPDLNPESSDAATLEQRRAYKIERQKG 546
Query: 671 ISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHA 730
++LFNRKPSKGIEFLI+SKKVG+SP+EV SFL+NTTGLN TMIGDYLGERE+F +KVMHA
Sbjct: 547 VTLFNRKPSKGIEFLISSKKVGNSPDEVVSFLRNTTGLNATMIGDYLGEREDFPMKVMHA 606
Query: 731 YVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVL 790
YVDSF+FK M+FG AIRFFLRGFRLPGEAQKIDRIMEKFAER+CKCNP+SF+SADTAYVL
Sbjct: 607 YVDSFDFKEMNFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERFCKCNPNSFSSADTAYVL 666
Query: 791 AYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNAD 850
AYSVIMLNTDAHN MVK+KMTKADFIRNNRGIDDGKDLPEEYLG LYDQ+V NEIKM++D
Sbjct: 667 AYSVIMLNTDAHNIMVKEKMTKADFIRNNRGIDDGKDLPEEYLGALYDQVVINEIKMSSD 726
Query: 851 SSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLY 910
SSAPES+Q+N LNKLLGLDGILNLV QTEEKA+GANGLLI+ IQE+F+SKSGKSES Y
Sbjct: 727 SSAPESRQSNGLNKLLGLDGILNLVYWTQTEEKAVGANGLLIKDIQEKFRSKSGKSESAY 786
Query: 911 HAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQR 970
H VTD ILRFMVEV WGPMLAAFSVTLDQSDD+LA +CL+GFR+AVHVTAVMGMQTQR
Sbjct: 787 HVVTDVAILRFMVEVSWGPMLAAFSVTLDQSDDRLAAVECLRGFRYAVHVTAVMGMQTQR 846
Query: 971 DAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQL 1030
DAFVTS+AKFT LHCA DMKQKNVDAVKAIISIAIEDGNHLQ+AWEHILTCLSRIEHLQL
Sbjct: 847 DAFVTSMAKFTNLHCAGDMKQKNVDAVKAIISIAIEDGNHLQDAWEHILTCLSRIEHLQL 906
Query: 1031 LGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVN 1090
LGEGAP+DAS+ ++ E +EK K++GFP+LKKKG LQNP +MAVVRGGSYDS+T+G N
Sbjct: 907 LGEGAPSDASYF--ASTETEEK--KALGFPNLKKKGALQNPVMMAVVRGGSYDSSTIGPN 962
Query: 1091 SPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQS 1150
PGLV +QIN+FIANLNLLDQIG+F+LN+V+AHSQRL +EAIVAFVKALCKVS+SELQS
Sbjct: 963 MPGLVKQDQINNFIANLNLLDQIGSFQLNNVYAHSQRLKTEAIVAFVKALCKVSMSELQS 1022
Query: 1151 PTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQL 1210
PTDPRVFSLTKLVEIAHYNMNRIRLVWSR+W++LSDFFVSVGLSENLSVAIFVMDSLRQL
Sbjct: 1023 PTDPRVFSLTKLVEIAHYNMNRIRLVWSRIWSILSDFFVSVGLSENLSVAIFVMDSLRQL 1082
Query: 1211 AMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKS 1270
+MKFLEREELANYNFQNEFLRPFVI+MQKS SAEIRELI+RCISQMVLSRVSNVKSGWKS
Sbjct: 1083 SMKFLEREELANYNFQNEFLRPFVIVMQKSSSAEIRELIVRCISQMVLSRVSNVKSGWKS 1142
Query: 1271 VFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNS 1330
VF +FT AAADERKNIVLLAFETMEKIVREYF +ITETE+TTFTDCV+CL+TFTNS F S
Sbjct: 1143 VFKVFTTAAADERKNIVLLAFETMEKIVREYFSYITETEATTFTDCVRCLITFTNSTFTS 1202
Query: 1331 DVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVP 1390
DV LNAIAFLRFCA+KLADGGLV NEKG S+P +D++P Q+F D D+N S+WVP
Sbjct: 1203 DVSLNAIAFLRFCALKLADGGLVWNEKGRSSSPSTPVTDDHSPSTQNFMDADENISYWVP 1262
Query: 1391 LLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKD 1450
LLTGLSKLTSDSRS IRKSSLEVLFNILKDHGH+F R FW+GV+S VI+PIFN V + D
Sbjct: 1263 LLTGLSKLTSDSRSAIRKSSLEVLFNILKDHGHIFSRTFWIGVFSSVIYPIFNSVWGEND 1322
Query: 1451 MPDKDEPDS-PTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGF 1509
+ KDE S P++ S +WD+ET+A+ A+ LVD+F+ FF V+RSQL VVS+L G
Sbjct: 1323 LLSKDEHSSFPSTFSSHPSEVSWDAETSAMAAQYLVDLFVSFFTVIRSQLSSVVSLLAGL 1382
Query: 1510 IRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDI 1569
IRSP QGP GV ALL LA ELG R S++EW+EI LA+ E + TL SF+K LRTM+DI
Sbjct: 1383 IRSPAQGPTVAGVGALLRLADELGDRFSENEWKEIFLAVNEAASLTLSSFMKTLRTMDDI 1442
Query: 1570 EIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKL 1629
+T +D + ++ D+IDED+LQT +YVV+R KSHIT+QL VQV +LY++
Sbjct: 1443 PDEDT---LSDQDFSNE-----DDIDEDSLQTMSYVVARTKSHITVQLQVVQVVTDLYRI 1494
Query: 1630 HLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQ 1689
H + L ++V ++L+I SSI+SHAH+LNS+L+LQKK++R C +LELS+PPM+HFEN+++Q
Sbjct: 1495 HQQSLLASHVTVILEILSSISSHAHQLNSDLILQKKVRRACSILELSEPPMLHFENDTFQ 1554
Query: 1690 TYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQKVKAVKQQRVVRWILP 1749
YL+ L+ +T NP S ELN+ES L+ C IL+MYL CT Q + + ++ WILP
Sbjct: 1555 NYLDILQAIVTNNPGVSLELNVESQLMTVCMQILKMYLKCTLFQGDELEETRQPKNWILP 1614
Query: 1750 LGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLG 1809
+G+A KEE AAR+ LVV+ L+ L L+R++FK+Y N FPLL++LVRSEHSS +V VL
Sbjct: 1615 MGAASKEEAAARSPLVVAVLKALRELKRDSFKRYAPNFFPLLVELVRSEHSSSQVPQVLS 1674
Query: 1810 TMFQSCIGPIL 1820
T+F +C+G ++
Sbjct: 1675 TVFHTCMGAMM 1685
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Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Arabidopsis thaliana (taxid: 3702) |
| >sp|F4JN05|BIG4_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 4 OS=Arabidopsis thaliana GN=BIG4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LPC5|BIG3_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 3 OS=Arabidopsis thaliana GN=BIG3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LZX8|BIG2_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Arabidopsis thaliana GN=BIG2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7TSU1|BIG2_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Rattus norvegicus GN=Arfgef2 PE=1 SV=1 | Back alignment and function description |
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| >sp|A2A5R2|BIG2_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Mus musculus GN=Arfgef2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9Y6D5|BIG2_HUMAN Brefeldin A-inhibited guanine nucleotide-exchange protein 2 OS=Homo sapiens GN=ARFGEF2 PE=1 SV=3 | Back alignment and function description |
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| >sp|F4IXW2|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2 | Back alignment and function description |
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| >sp|G3X9K3|BIG1_MOUSE Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Mus musculus GN=Arfgef1 PE=2 SV=1 | Back alignment and function description |
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| >sp|D4A631|BIG1_RAT Brefeldin A-inhibited guanine nucleotide-exchange protein 1 OS=Rattus norvegicus GN=Arfgef1 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1822 | ||||||
| 224104801 | 1729 | predicted protein [Populus trichocarpa] | 0.784 | 0.827 | 0.774 | 0.0 | |
| 225428344 | 1702 | PREDICTED: brefeldin A-inhibited guanine | 0.797 | 0.853 | 0.768 | 0.0 | |
| 449517146 | 1711 | PREDICTED: LOW QUALITY PROTEIN: brefeldi | 0.803 | 0.855 | 0.759 | 0.0 | |
| 449454321 | 1711 | PREDICTED: brefeldin A-inhibited guanine | 0.803 | 0.855 | 0.760 | 0.0 | |
| 297744456 | 1611 | unnamed protein product [Vitis vinifera] | 0.778 | 0.880 | 0.760 | 0.0 | |
| 356501773 | 1721 | PREDICTED: brefeldin A-inhibited guanine | 0.782 | 0.828 | 0.758 | 0.0 | |
| 356552456 | 1714 | PREDICTED: brefeldin A-inhibited guanine | 0.791 | 0.841 | 0.741 | 0.0 | |
| 356501775 | 1732 | PREDICTED: brefeldin A-inhibited guanine | 0.782 | 0.823 | 0.752 | 0.0 | |
| 334187256 | 1687 | SEC7-like guanine nucleotide exchange fa | 0.784 | 0.847 | 0.723 | 0.0 | |
| 297797804 | 1694 | guanine nucleotide exchange family prote | 0.779 | 0.838 | 0.722 | 0.0 |
| >gi|224104801|ref|XP_002313570.1| predicted protein [Populus trichocarpa] gi|222849978|gb|EEE87525.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 2340 bits (6064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1137/1468 (77%), Positives = 1279/1468 (87%), Gaps = 38/1468 (2%)
Query: 386 GAELGGESKIREDGFLLFKNICKLSMKFSSQENPDDLILLRGKILSLELLKVVTDNGGPV 445
G+ +GG SKIREDGFLLF+NICKLSMKFSSQE PDD ILLRGKILSLELLKV+ DNGGP+
Sbjct: 268 GSAVGG-SKIREDGFLLFRNICKLSMKFSSQETPDDQILLRGKILSLELLKVIMDNGGPI 326
Query: 446 WLSNAR-------------------------------FLIAIKQFLCLSLLKNSALSVMA 474
W SN R FL IKQFLCLSL+KN+ALSVMA
Sbjct: 327 WRSNERQVTNTFFHSFLNSSHNAYIIISITFSSIWYRFLNTIKQFLCLSLIKNTALSVMA 386
Query: 475 VFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQD 534
+FQLQCSIFM LL K+RSGLK EIGIFFPMLVLRVLENV QPSF+QKMTVLN ++KISQD
Sbjct: 387 IFQLQCSIFMMLLVKFRSGLKEEIGIFFPMLVLRVLENVNQPSFLQKMTVLNFVDKISQD 446
Query: 535 SQIIVDVFVNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLV 594
SQIIVD+F+NYDCDVD+PN++ERIVNGLLKTALGPPPGSTT+LS QDI FR+ESVKCLV
Sbjct: 447 SQIIVDIFINYDCDVDAPNLYERIVNGLLKTALGPPPGSTTTLSSVQDITFRHESVKCLV 506
Query: 595 SIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGEDGSVPDYEFHAEVNPEFSDA 654
SIIRSMG WMDQ+LR G++YLPK SE+ +S +N+S NGED DY+ H+EVN E SDA
Sbjct: 507 SIIRSMGAWMDQKLRTGDSYLPKSSESSTSTENHSTLNGEDAGASDYDLHSEVNSEMSDA 566
Query: 655 ATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIG 714
ATLEQRRAYKIELQKGIS+FNRKPSKGIEFLIN+KKVG SPEEVA+FLKNTTGLNET+IG
Sbjct: 567 ATLEQRRAYKIELQKGISIFNRKPSKGIEFLINAKKVGGSPEEVATFLKNTTGLNETVIG 626
Query: 715 DYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYC 774
DYLGER+EF L+VMHAYVDSFNFK MDFG AIRFFLRGFRLPGEAQKIDRIMEKFAERYC
Sbjct: 627 DYLGERDEFCLRVMHAYVDSFNFKEMDFGEAIRFFLRGFRLPGEAQKIDRIMEKFAERYC 686
Query: 775 KCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLG 834
KCNP+SFTSADTAYVLAYSVIMLNTDAHNSMVKDKM+KADFIRNNRGIDDGKDLPEEYLG
Sbjct: 687 KCNPNSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMSKADFIRNNRGIDDGKDLPEEYLG 746
Query: 835 VLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRR 894
LYDQIVKNEIKM+ADSS P+SKQANSLNKLLGLDGILNLV GKQTEEKALGANGLLIRR
Sbjct: 747 TLYDQIVKNEIKMSADSSVPQSKQANSLNKLLGLDGILNLVTGKQTEEKALGANGLLIRR 806
Query: 895 IQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGF 954
IQEQFK+KSGKS S+YH VTD ILRFMVEVCWGPMLAAFSVTLDQSDD+LAT+QCLQGF
Sbjct: 807 IQEQFKAKSGKSGSIYHVVTDAAILRFMVEVCWGPMLAAFSVTLDQSDDRLATSQCLQGF 866
Query: 955 RHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEA 1014
+ AVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMK KNVDAVKAIISIAIEDGN+LQ+A
Sbjct: 867 QCAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKLKNVDAVKAIISIAIEDGNNLQDA 926
Query: 1015 WEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEKTQKSMGFPSLKKKGTLQNPSVM 1074
WEHILTCLSR+EHLQLLGEGAP DAS+LT SN E DEK KSMG+PSLKKKGTLQNP+VM
Sbjct: 927 WEHILTCLSRVEHLQLLGEGAPPDASYLTPSNGETDEKALKSMGYPSLKKKGTLQNPAVM 986
Query: 1075 AVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIV 1134
AVVRGGSYDSTTVG NSPGLVTP QI + I+NLNLLDQIGNFELNHVFA+SQRLNSEAIV
Sbjct: 987 AVVRGGSYDSTTVGANSPGLVTPGQIINLISNLNLLDQIGNFELNHVFANSQRLNSEAIV 1046
Query: 1135 AFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLS 1194
AFVKALCKVSISELQSPTDPRVFSLTK+VEIAHYNMNRIRLVWSR+WNVLSDFFVSVGLS
Sbjct: 1047 AFVKALCKVSISELQSPTDPRVFSLTKIVEIAHYNMNRIRLVWSRIWNVLSDFFVSVGLS 1106
Query: 1195 ENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCIS 1254
ENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVI+MQKS S EIRELI+RCIS
Sbjct: 1107 ENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSSSTEIRELIVRCIS 1166
Query: 1255 QMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFT 1314
QMVLSRVSNVKSGWKSVF +FT AA+DERKN+VLLAFETMEKIVREYFP+ITETE TTFT
Sbjct: 1167 QMVLSRVSNVKSGWKSVFMVFTVAASDERKNVVLLAFETMEKIVREYFPYITETERTTFT 1226
Query: 1315 DCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGLVCNEKGSVDGSSSPPVNDNAPD 1374
DCV+CL TFTNSRFNSDV LNAIAFLRFCA+KLADGGL+CN K VD S P V++ A D
Sbjct: 1227 DCVRCLTTFTNSRFNSDVSLNAIAFLRFCALKLADGGLICNVKSRVDDLSIPIVDEVALD 1286
Query: 1375 LQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVY 1434
+++ S+KDD++SFW+PLLTGLSKL SD RS +RKS+LEVLFNIL DHGHLF R FW+ V+
Sbjct: 1287 VENHSNKDDHASFWIPLLTGLSKLASDPRSAVRKSALEVLFNILNDHGHLFSRSFWITVF 1346
Query: 1435 SHVIFPIFNGVCDKKDMPDKDEPDSPTSHSPLSEGSTWDSETAAIGAECLVDIFICFFDV 1494
+ VIFPIF+GV DKKD+ D+ DS TS SP +E STWDSET+A+ +CLVD+F+ FF+V
Sbjct: 1347 NSVIFPIFSGVSDKKDVKDQ---DSSTSASPHTERSTWDSETSAVAVQCLVDLFVSFFNV 1403
Query: 1495 VRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTAS 1554
+RSQL +VSIL GF+RSP++GPASTGVA+LL LAGELGSR+S+DEWREI LALKE AS
Sbjct: 1404 IRSQLQSIVSILMGFVRSPVKGPASTGVASLLRLAGELGSRISEDEWREIFLALKEAAAS 1463
Query: 1555 TLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHIT 1614
LP F+KVLR M+DIE+P + YAD++ SDHG ND++ +DNLQTAAYV+SR+KSHI
Sbjct: 1464 LLPGFMKVLRIMDDIEMPESPNLYADVDAPSDHGFTNDDLPDDNLQTAAYVISRVKSHIA 1523
Query: 1615 LQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLE 1674
+QLL VQV ++LYK + + LS NV+IL+DIF+SIASHAH+LNSE L KKLQ+ C +
Sbjct: 1524 VQLLIVQVVSDLYKANRQFLSAANVRILVDIFTSIASHAHQLNSETNLLKKLQKGCSIAG 1583
Query: 1675 LSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTGQQK 1734
+SDPPMVHFENESY+ YL+FL+D L NPS SE L+IE L CE ILQ+YLNCT
Sbjct: 1584 ISDPPMVHFENESYENYLDFLQDLLKDNPSMSEALSIEEQLAAVCEEILQIYLNCTAGS- 1642
Query: 1735 VKAVKQQR-VVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLID 1793
+AV+Q + V+ W LPLGSA+KEE+AARTSL++SALRVL+ LER++F+ + FPLL+D
Sbjct: 1643 -EAVQQNKTVMHWNLPLGSAKKEEVAARTSLLLSALRVLNDLERDSFRGHARQFFPLLVD 1701
Query: 1794 LVRSEHSSREVQLVLGTMFQSCIGPILL 1821
LVR EH+S EVQ +L +F SCIGPI++
Sbjct: 1702 LVRCEHNSGEVQRILSNIFLSCIGPIIM 1729
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225428344|ref|XP_002280001.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449517146|ref|XP_004165607.1| PREDICTED: LOW QUALITY PROTEIN: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449454321|ref|XP_004144904.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] gi|449473000|ref|XP_004153755.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297744456|emb|CBI37718.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356501773|ref|XP_003519698.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356552456|ref|XP_003544583.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356501775|ref|XP_003519699.1| PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like isoform 2 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|334187256|ref|NP_195533.2| SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana] gi|449061809|sp|F4JSZ5.1|BIG1_ARATH RecName: Full=Brefeldin A-inhibited guanine nucleotide-exchange protein 1; Short=BIG1; AltName: Full=ARF guanine-nucleotide exchange factor BIG1 gi|332661492|gb|AEE86892.1| SEC7-like guanine nucleotide exchange family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297797804|ref|XP_002866786.1| guanine nucleotide exchange family protein [Arabidopsis lyrata subsp. lyrata] gi|297312622|gb|EFH43045.1| guanine nucleotide exchange family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1822 | ||||||
| TAIR|locus:2122143 | 1706 | AT4G35380 "AT4G35380" [Arabido | 0.774 | 0.827 | 0.658 | 0.0 | |
| UNIPROTKB|Q10P53 | 1789 | Os03g0246800 "Sec7 domain cont | 0.775 | 0.789 | 0.536 | 0.0 | |
| TAIR|locus:2101906 | 1793 | AT3G60860 "AT3G60860" [Arabido | 0.781 | 0.794 | 0.518 | 0.0 | |
| TAIR|locus:2025502 | 1750 | EDA10 "AT1G01960" [Arabidopsis | 0.718 | 0.748 | 0.537 | 0.0 | |
| UNIPROTKB|A8J189 | 2150 | CHLREDRAFT_148829 "SEC7/BIG-li | 0.209 | 0.177 | 0.47 | 1.1e-257 | |
| UNIPROTKB|E1C293 | 1538 | ARFGEF1 "Uncharacterized prote | 0.340 | 0.403 | 0.408 | 4.8e-199 | |
| UNIPROTKB|E2QVB0 | 1785 | ARFGEF2 "Uncharacterized prote | 0.345 | 0.352 | 0.391 | 3.5e-194 | |
| UNIPROTKB|F1SBE8 | 1792 | ARFGEF2 "Uncharacterized prote | 0.345 | 0.351 | 0.391 | 1.5e-193 | |
| FB|FBgn0028538 | 1653 | Sec71 "Sec71 ortholog (S. cere | 0.363 | 0.400 | 0.385 | 4.7e-193 | |
| UNIPROTKB|Q9Y6D5 | 1785 | ARFGEF2 "Brefeldin A-inhibited | 0.345 | 0.352 | 0.393 | 5.2e-193 |
| TAIR|locus:2122143 AT4G35380 "AT4G35380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4786 (1689.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 941/1429 (65%), Positives = 1140/1429 (79%)
Query: 395 IREDGFLLFKNICKLSMKFSSQENPDDLILLRGKILSLELLKVVTDNGGPVWLSNARFLI 454
+R+D FLLFKN+CKLSM+FSS+EN DD I++RGK LSLELLKV+ DNGG VW +N F+
Sbjct: 292 VRQDAFLLFKNLCKLSMRFSSKENNDDQIMVRGKTLSLELLKVIIDNGGSVWRTNESFIN 351
Query: 455 AIKQFLCLSLLKNSALSVMAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVL 514
A+KQ+LCLSLLKNSA+S+M++FQLQC+IFMSLLSK RS LKAEIGIFFPM+VLRVLENVL
Sbjct: 352 AVKQYLCLSLLKNSAVSIMSIFQLQCAIFMSLLSKLRSVLKAEIGIFFPMIVLRVLENVL 411
Query: 515 QPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDVDSPNIFERIVNGLLKTAXXXXXXXX 574
QPS++QKMTVLNLL+K+SQD Q++VD+FVNYDCDV+S NI ERIVNGLLKTA
Sbjct: 412 QPSYLQKMTVLNLLDKMSQDPQLMVDIFVNYDCDVESSNILERIVNGLLKTALGPPTGSS 471
Query: 575 XXXXXAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSETDSSIDNNSIPNGE 634
AQD FR +SVKCLV++ ++MG WMDQQL++ ET PKGS+ +S+D+N+ E
Sbjct: 472 TTLSPAQDSTFRNDSVKCLVNLAKAMGNWMDQQLKVNETVWPKGSQVYASMDSNASQISE 531
Query: 635 -DGSVPDYEFHAEV-NPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVG 692
+G++ D + + NPE DA+ LEQRRAYKIELQKGISLFNRKPSKG+EFLI++KK+G
Sbjct: 532 LEGTISDCDSQPDTSNPEAYDASMLEQRRAYKIELQKGISLFNRKPSKGVEFLISTKKIG 591
Query: 693 DSPEEVASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRG 752
SPEEVASFL T GLN T+IGDYLGER+E LKVMHAYVDSFNF+ DF AIRFFLRG
Sbjct: 592 SSPEEVASFLMKTAGLNGTVIGDYLGERDELPLKVMHAYVDSFNFEKKDFVEAIRFFLRG 651
Query: 753 FRLPGEAQKIDRIMEKFAERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTK 812
FRLPGEAQKIDRIMEKFAE Y KCNP SFTSADTAYVLAYSVIMLNTDAHN+MVKDKMTK
Sbjct: 652 FRLPGEAQKIDRIMEKFAEHYWKCNPGSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMTK 711
Query: 813 ADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGIL 872
ADF+RNNRGIDDGKDLPEEYLG LYD++VK EI+MN+D+ AP++KQ N LNKLLGLDGIL
Sbjct: 712 ADFVRNNRGIDDGKDLPEEYLGSLYDRVVKEEIRMNSDTLAPQNKQVNGLNKLLGLDGIL 771
Query: 873 NLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLA 932
NLV Q +EK GANG LIR IQEQF++K KSES+YH VTD ILRF++EV WGPMLA
Sbjct: 772 NLVSWMQPDEKPHGANGRLIRDIQEQFQAKPEKSESVYHTVTDISILRFILEVSWGPMLA 831
Query: 933 AFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQK 992
AFSVT+DQSDD+LAT+ CLQGFR+AVHVTAVMGMQTQRDAFVTS+AKFT LHCAADMKQK
Sbjct: 832 AFSVTIDQSDDRLATSLCLQGFRYAVHVTAVMGMQTQRDAFVTSMAKFTNLHCAADMKQK 891
Query: 993 NVDAVKAIISIAIEDGNHLQEAWEHILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADEK 1052
NVDAVKAII+IAIEDGNHL +WEHILTCLSRIEHLQLLGE +P++ ++ E D+K
Sbjct: 892 NVDAVKAIITIAIEDGNHLHGSWEHILTCLSRIEHLQLLGEVSPSEKRYVPTKKAEVDDK 951
Query: 1053 TQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVTPEQINHFIANLNLLDQ 1112
K++GFP+LKK+G+ QNPSVMAVVRGGSYDST++ + P LVTPEQI FIANLNLLDQ
Sbjct: 952 --KALGFPNLKKRGSFQNPSVMAVVRGGSYDSTSLVKSVPKLVTPEQIKSFIANLNLLDQ 1009
Query: 1113 IGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNR 1172
IGNFELNHV+A+SQRLNSEAIV+FVKALCKVS+SELQSPTDPRVFSLTKLVE AHYNMNR
Sbjct: 1010 IGNFELNHVYANSQRLNSEAIVSFVKALCKVSMSELQSPTDPRVFSLTKLVETAHYNMNR 1069
Query: 1173 IRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRP 1232
IRLVWSR+WNVLSDFFVSVGLSENLSVAIFVMDSLRQL+MKFLEREELANY+FQ+EFLRP
Sbjct: 1070 IRLVWSRIWNVLSDFFVSVGLSENLSVAIFVMDSLRQLSMKFLEREELANYHFQHEFLRP 1129
Query: 1233 FVIIMQKSGSAEIRELIIRCISQMVLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFE 1292
FV++MQKS SAEIRELI+RC+SQMVLSRVSNVKSGWK+VF++FT AA DERKNIVLLAFE
Sbjct: 1130 FVVVMQKSSSAEIRELIVRCVSQMVLSRVSNVKSGWKNVFTVFTTAALDERKNIVLLAFE 1189
Query: 1293 TMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNAIAFLRFCAVKLADGGL 1352
T+EKIVR++F I ETE T + DC++CL+TFTNS+F D+ N I FLRFCA+KL +GGL
Sbjct: 1190 TIEKIVRDHFHCIIETEITVYADCIRCLITFTNSKFEGDIGFNTIEFLRFCALKLEEGGL 1249
Query: 1353 VCNEKGSVDGSSSPPVNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLE 1412
V NEK + ++ + ++ D QSF+D D+ S+W+PLLTGL K SD R IRK S+E
Sbjct: 1250 VLNEK--LKNNTISALKEDFSDTQSFTDLDEQVSYWIPLLTGLCKQVSDPRPAIRKRSIE 1307
Query: 1413 VLFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCXXXXXXXXXXXXXXTSHSPLSEGSTW 1472
VLF+IL DHGHLF R FW G++S +I P+FN + +S S +E +TW
Sbjct: 1308 VLFHILMDHGHLFTRPFWTGIFSSIILPVFNNIRSKTDMLFEESVDSPSSASLDTEETTW 1367
Query: 1473 DSETAAIGAECLVDIFICFFDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGEL 1532
D ET+ + + LVD+ + FF VRSQLP VVSI+ GFI+SP QG +G++ LLHLA L
Sbjct: 1368 DVETSTLALQLLVDLLVKFFRSVRSQLPSVVSIIVGFIKSPFQGSTGSGISVLLHLADGL 1427
Query: 1533 GSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEIPNTSQSYADMEMDSDHGSIN- 1591
S+DEWREI LALKE + T F+KVLRTM+DIE D+E S S+N
Sbjct: 1428 ARSASEDEWREIFLALKEAASLTFAGFMKVLRTMDDIE---------DVETLSGQ-SVNI 1477
Query: 1592 DNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIAS 1651
++D+D+L +YVVSR K HI + V+V ++LY+ + LS ++V IL DIFS IAS
Sbjct: 1478 GDLDDDSLHIMSYVVSRTKKHIDVLSQIVEVVSDLYRRNQFSLSASHVDILADIFSCIAS 1537
Query: 1652 HAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNI 1711
HA +LN++ VL++K +R C V L++P +++FENE+Y++Y+ FL+D +T NP+ S+EL++
Sbjct: 1538 HAQQLNTDTVLRRKFKRACSVQNLTEPQLLNFENEAYKSYMMFLQDMVTCNPNVSKELDL 1597
Query: 1712 ESHLVEACEMILQMYLNCTGXXXXXXXXXXXXXXWILPLGSARKEELAARTSLVVSALRV 1771
ES LV C I+++YL CT W+LP+ S R EE ARTSL+VS+L
Sbjct: 1598 ESRLVTECAKIVKIYLKCTDPQQQEQQQRKPVL-WVLPMESDRVEEATARTSLLVSSLEA 1656
Query: 1772 LSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTMFQSCIGPIL 1820
L LE E+ KK++S+ FPLL+DLVR+EH S +V VL + +SCIGPIL
Sbjct: 1657 LCSLEAESLKKHVSSFFPLLVDLVRTEHCSPQVPYVLSNVLKSCIGPIL 1705
|
|
| UNIPROTKB|Q10P53 Os03g0246800 "Sec7 domain containing protein, expressed" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2101906 AT3G60860 "AT3G60860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025502 EDA10 "AT1G01960" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A8J189 CHLREDRAFT_148829 "SEC7/BIG-like ARF-guanine nucleotide exchange factor" [Chlamydomonas reinhardtii (taxid:3055)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1C293 ARFGEF1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E2QVB0 ARFGEF2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SBE8 ARFGEF2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0028538 Sec71 "Sec71 ortholog (S. cerevisiae)" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q9Y6D5 ARFGEF2 "Brefeldin A-inhibited guanine nucleotide-exchange protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9Y6D5 | BIG2_HUMAN | No assigned EC number | 0.3337 | 0.8068 | 0.8235 | yes | no |
| Q7TSU1 | BIG2_RAT | No assigned EC number | 0.3327 | 0.8029 | 0.8168 | yes | no |
| F4JSZ5 | BIG1_ARATH | No assigned EC number | 0.7236 | 0.7843 | 0.8470 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
 | fgenesh4_pm.C_LG_IX000006 | hypothetical protein (1729 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1822 | |||
| PLN03076 | 1780 | PLN03076, PLN03076, ARF guanine nucleotide exchang | 0.0 | |
| pfam01369 | 188 | pfam01369, Sec7, Sec7 domain | 3e-90 | |
| COG5307 | 1024 | COG5307, COG5307, SEC7 domain proteins [General fu | 3e-85 | |
| cd00171 | 185 | cd00171, Sec7, Sec7 domain; Domain named after the | 9e-85 | |
| smart00222 | 189 | smart00222, Sec7, Sec7 domain | 2e-77 | |
| PLN03076 | 1780 | PLN03076, PLN03076, ARF guanine nucleotide exchang | 7e-61 | |
| pfam12783 | 166 | pfam12783, Sec7_N, Guanine nucleotide exchange fac | 1e-55 | |
| pfam09324 | 86 | pfam09324, DUF1981, Domain of unknown function (DU | 8e-35 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 1e-07 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 2e-07 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 8e-07 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 9e-07 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 1e-06 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 6e-06 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 9e-06 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 4e-05 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 1e-04 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 5e-04 | |
| PHA03169 | 413 | PHA03169, PHA03169, hypothetical protein; Provisio | 5e-04 | |
| TIGR00927 | 1096 | TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | 0.001 |
| >gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
Score = 1958 bits (5075), Expect = 0.0
Identities = 834/1466 (56%), Positives = 1070/1466 (72%), Gaps = 21/1466 (1%)
Query: 372 EGEKGE--GGEGQGNGGAELGGESKIREDGFLLFKNICKLSMKFSSQENPDDLILLRGKI 429
EG KGE GE + + E+ +K+R D FL+F+ +CKLSMK +E D L+RGKI
Sbjct: 319 EGRKGELADGEVEKDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEALADPQLMRGKI 378
Query: 430 LSLELLKVVTDNGGPVWLSNARFLIAIKQFLCLSLLKNSALSVMAVFQLQCSIFMSLLSK 489
L+LELLK++ +N G V+ ++ RFL AIKQ+LCLSLLKNSA S+M +FQL CSIF+SL+S+
Sbjct: 379 LALELLKILLENAGAVFRTSDRFLGAIKQYLCLSLLKNSASSLMIIFQLSCSIFISLVSR 438
Query: 490 YRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVFVNYDCDV 549
+R+GLKAEIG+FFPM+VLRVLENV QP+F QKM VL L+K+ DSQI+VD+F+NYDCDV
Sbjct: 439 FRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLDKLCVDSQILVDIFINYDCDV 498
Query: 550 DSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLR 609
+S NIFER+VNGLLKTA G PPG T+L P Q+ A + E++KCLV+I+RSMG WM++QLR
Sbjct: 499 NSSNIFERMVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMNKQLR 558
Query: 610 IGETYLPKGSE-TDSSIDNNSIP---NGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKI 665
+ + K + +++++ S+P D + + H+E++ E SDAAT+EQRRAYK+
Sbjct: 559 LPDPASLKKLDAVENNLEPGSLPVANGNGDENGEGSDSHSELSSETSDAATIEQRRAYKL 618
Query: 666 ELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSL 725
ELQ+GISLFNRKP KGIEFLIN+ KVG+SPEE+A+FLK+ +GLN+T+IGDYLGERE+ SL
Sbjct: 619 ELQEGISLFNRKPKKGIEFLINANKVGESPEEIAAFLKDASGLNKTLIGDYLGEREDLSL 678
Query: 726 KVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSAD 785
KVMHAYVDSF+F+GM+F AIR FL+GFRLPGEAQKIDRIMEKFAERYCKCNP +F+SAD
Sbjct: 679 KVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKAFSSAD 738
Query: 786 TAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEI 845
TAYVLAYSVIMLNTDAHN MVK+KM+ DFIRNNRGIDDGKDLPEE++ LY++I KNEI
Sbjct: 739 TAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERISKNEI 798
Query: 846 KMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGK 905
KM D P+ KQ+ + N++LGLD ILN+VI K+ E+ + + LI+ +QEQFK K+ K
Sbjct: 799 KMKEDDLVPQQKQSANSNRILGLDSILNIVIRKRGEDSYMETSDDLIKHMQEQFKEKARK 858
Query: 906 SESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATNQCLQGFRHAVHVTAVMG 965
SES+Y+A TD ILRFMVEVCW PMLAAFSV LDQSDD++ T QCL+GFRHA+HVTAVM
Sbjct: 859 SESVYYAATDVVILRFMVEVCWAPMLAAFSVPLDQSDDEVVTFQCLEGFRHAIHVTAVMS 918
Query: 966 MQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEHILTCLSRI 1025
M+T RDAFVTS+AKFT LH AD+KQKN+DA+KAI+SIA EDGN+LQEAWEHILTC+SR
Sbjct: 919 MKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEHILTCVSRF 978
Query: 1026 EHLQLLGEGAPTDASFLTVSNVEADEKTQ-KSMGFPSLKKKGTLQNPSVMAVVRGGSYDS 1084
EHL LLGEGAP DA+F E+D+ Q KS P LK+KG + A VR GSYDS
Sbjct: 979 EHLHLLGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAVRRGSYDS 1038
Query: 1085 TTVGVNSPGLVTPEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVS 1144
VG + G+VT EQ+N+ ++NLN+L+Q+G+FE+N +F SQ+LNSEAI+ FVKALCKVS
Sbjct: 1039 AGVGGKASGVVTSEQMNNLVSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVKALCKVS 1098
Query: 1145 ISELQSPTDPRVFSLTKLVEIAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVM 1204
+ EL+SP+DPRVFSLTK+VEIAHYNMNRIRLVWS +W+VLSDFFV++G SENLS+AIF M
Sbjct: 1099 MEELRSPSDPRVFSLTKIVEIAHYNMNRIRLVWSSIWHVLSDFFVTIGCSENLSIAIFAM 1158
Query: 1205 DSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQMVLSRVSNV 1264
DSLRQL+MKFLEREELANYNFQNEF++PFVI+M+KS + EIRELIIRC+SQMVLSRV+NV
Sbjct: 1159 DSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQMVLSRVNNV 1218
Query: 1265 KSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFT 1324
KSGWKS+F +FT AA D+ KNIVLLAFE +EKI+REYFP+ITETE+TTFTDCV CL+ FT
Sbjct: 1219 KSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFT 1278
Query: 1325 NSRFNSDVCLNAIAFLRFCAVKLADGGL---VCNEKGSVDGSSSPPVNDNAPDLQSFSDK 1381
NSRFN D+ LNAIAFLRFCA KLA+G L N+ SS D + F+DK
Sbjct: 1279 NSRFNKDISLNAIAFLRFCATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQESGEFTDK 1338
Query: 1382 DDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEVLFNILKDHGHLFPRQFWMGVYSHVIFPI 1441
DD+ FW PLL GLS+L+ D R IRKS+L+VLF+ L++HGHLF W V+ V+FPI
Sbjct: 1339 DDHLYFWFPLLAGLSELSFDPRPEIRKSALQVLFDTLRNHGHLFSLPLWERVFESVLFPI 1398
Query: 1442 FNGVCDKKDMPDKDEPDSPTSHSPLSE--GSTWDSETAAIGAECLVDIFICFFDVVRSQL 1499
F+ V D DEP+ E W ET + + +VD+F+ F+ V L
Sbjct: 1399 FDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKFYPTVNPLL 1458
Query: 1500 PGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSF 1559
V+ +L FI+ P Q A G+AA + L G S ++W E++L+LKE +TLP F
Sbjct: 1459 KKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAANATLPDF 1518
Query: 1560 VKVLRTMNDIEIPNTSQSYADMEMDSDHGSINDNIDEDNLQTAAY-VVSRMKSHITLQLL 1618
V+ + +P + ++ ++ S DN E Y +S K +QLL
Sbjct: 1519 SYVV---SGEYMPAENIQDSENA-EAASSSTADNDAEAERSRRLYAAISDAKCRAAVQLL 1574
Query: 1619 SVQVAANLYKLHLRLLSTTNVKILLDIFSSIASHAHELNSELVLQKKLQRVCLVLELSDP 1678
+Q +Y ++ LS N +L D ++ASHAH++NS+ L+ KLQ + + ++ DP
Sbjct: 1575 LIQAVMEIYNMYRPRLSAKNTLVLFDALHTVASHAHKINSDTALRSKLQELGSMTQMQDP 1634
Query: 1679 PMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLN--CTGQQKVK 1736
P++ ENESYQ L FL++ + P ++E +ES LVE CE +LQ Y+ GQ
Sbjct: 1635 PLLRLENESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEEVLQFYIETSTAGQDSED 1694
Query: 1737 AVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVR 1796
+ QQ RW++PLGS ++ ELAAR LVV+ L+ + GL +F+K L FPLL L+
Sbjct: 1695 SSSQQP--RWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLIS 1752
Query: 1797 SEHSSREVQLVLGTMFQSCIGPILLQ 1822
EH S EVQ+ L M S +GP+LLQ
Sbjct: 1753 CEHGSNEVQVALSDMLSSWVGPVLLQ 1778
|
Length = 1780 |
| >gnl|CDD|216460 pfam01369, Sec7, Sec7 domain | Back alignment and domain information |
|---|
| >gnl|CDD|227623 COG5307, COG5307, SEC7 domain proteins [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|238100 cd00171, Sec7, Sec7 domain; Domain named after the S | Back alignment and domain information |
|---|
| >gnl|CDD|214569 smart00222, Sec7, Sec7 domain | Back alignment and domain information |
|---|
| >gnl|CDD|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal | Back alignment and domain information |
|---|
| >gnl|CDD|204198 pfam09324, DUF1981, Domain of unknown function (DUF1981) | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223003 PHA03169, PHA03169, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1822 | |||
| PLN03076 | 1780 | ARF guanine nucleotide exchange factor (ARF-GEF); | 100.0 | |
| KOG0929 | 1514 | consensus Guanine nucleotide exchange factor [Intr | 100.0 | |
| KOG0928 | 1386 | consensus Pattern-formation protein/guanine nucleo | 100.0 | |
| COG5307 | 1024 | SEC7 domain proteins [General function prediction | 100.0 | |
| KOG1848 | 1610 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| KOG0930 | 395 | consensus Guanine nucleotide exchange factor Cytoh | 100.0 | |
| cd00171 | 185 | Sec7 Sec7 domain; Domain named after the S. cerevi | 100.0 | |
| PF01369 | 190 | Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 do | 100.0 | |
| smart00222 | 187 | Sec7 Sec7 domain. Domain named after the S. cerevi | 100.0 | |
| KOG0931 | 627 | consensus Predicted guanine nucleotide exchange fa | 100.0 | |
| KOG1846 | 1777 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| PF12783 | 168 | Sec7_N: Guanine nucleotide exchange factor in Golg | 100.0 | |
| KOG0932 | 774 | consensus Guanine nucleotide exchange factor EFA6 | 99.94 | |
| PF09324 | 86 | DUF1981: Domain of unknown function (DUF1981); Int | 99.85 | |
| KOG2023 | 885 | consensus Nuclear transport receptor Karyopherin-b | 96.48 | |
| PLN03076 | 1780 | ARF guanine nucleotide exchange factor (ARF-GEF); | 96.1 | |
| KOG1824 | 1233 | consensus TATA-binding protein-interacting protein | 92.6 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 91.29 | |
| KOG2171 | 1075 | consensus Karyopherin (importin) beta 3 [Nuclear s | 90.64 | |
| PF01602 | 526 | Adaptin_N: Adaptin N terminal region; InterPro: IP | 90.45 | |
| PF03378 | 435 | CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I | 88.77 | |
| PF14500 | 262 | MMS19_N: Dos2-interacting transcription regulator | 85.11 | |
| PF11864 | 464 | DUF3384: Domain of unknown function (DUF3384); Int | 82.11 | |
| PF12348 | 228 | CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi | 80.44 | |
| KOG1848 | 1610 | consensus Uncharacterized conserved protein [Funct | 80.04 |
| >PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=3296.98 Aligned_cols=1749 Identities=53% Similarity=0.866 Sum_probs=1459.7
Q ss_pred CCCCCCCCCcccccccchHHHHHHHHhhhhhcchhHHHHHHHHHHHhhccCCC-------------CCcccccccC----
Q 000232 1 MSASQTLGGPSRCGRAVGPSLDKIIKNAAWRKHAHLVSSCKSVLDKLDSISDD-------------PSQVSSSLFG---- 63 (1822)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~l~~i~~~k~~kk~~~l~~a~e~al~~lk~~~~~-------------~~~~~~~~~~---- 63 (1822)
|+++++ ++++++||+++||+|+++|+||||++|++||++||+.|++.... .++.+.|+.+
T Consensus 1 ~~~~~~---~~~~~~~~~~ale~i~~~k~~rk~~~l~~a~~~al~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (1780)
T PLN03076 1 MASSEA---DSRLGKVVSPALEKIIKNASWRKHSKLAHECKAVIERLNSPEKNPPSTSSAAADSASASSLPGPLHDGGSI 77 (1780)
T ss_pred CCcccc---cchhhHHHHHHHHHHHhhHHhhccHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccc
Confidence 667777 99999999999999999999999999999999999999976532 1122223322
Q ss_pred -CCcCCcccchHHHHHhhcCCCcchHHHHHHHHHHHHhccCCcCccCCCCCCCCCCCCCCCCcccccHHHHHHHHHHhhh
Q 000232 64 -LSQNDAGLVLHPIFLALDSAYPKVVEPALECAFKLFSLGLARGEIEGESDNTNTTSTTNTNQKNFNIIYKLIEAICKVC 142 (1822)
Q Consensus 64 -~~~~~~~~i~~P~~lAc~t~~~kl~~~ALdclqKLia~~~l~~~~~~~~~~~~~~~~~~~~~~~~~li~~ii~tIc~c~ 142 (1822)
++.++|+.||.||++||+||++||+++|||||||||+||||.|+.++.++ +.++|||++|++||+|+
T Consensus 78 ~~~~~~~~~i~~pl~lac~s~~~ki~~~ALdcl~KLis~~~i~~~~~~~~~------------~~~~lid~~i~~Ic~c~ 145 (1780)
T PLN03076 78 EYSLAESELILSPLINACGTGSAKIVDPALDCIQKLIAHGYLRGEADPSGG------------PEALLLAKLIESVCKCH 145 (1780)
T ss_pred cccccCHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhcCCCCCCCCC------------ccccHHHHHHHHHHhhc
Confidence 23468999999999999999999999999999999999999998754322 36689999999999999
Q ss_pred CCCCCchHHHHHHHHHHHhccCCcccchhhHHHHHHHHHHhhccCCCchhhHHHHHHHHHHHHHHHHhhhccccCCCCcc
Q 000232 143 GIGEEPIELSVLRVLLSAVRSPCLLIRGDCLLLIVRTCYNVYLGGSSGTNQICAKSVLAQIMVIVFTRVEEDSMNVPHFK 222 (1822)
Q Consensus 143 ~~td~~vqLqIlkaLl~~v~s~~~~vhg~~Ll~avr~cyni~l~Sk~~~nq~tA~atLtQmv~~VF~Rv~~~~~~~~~~~ 222 (1822)
+.+||+|||||||+||++|+++++.|||++||+|||||||||+.|||++||+||||||||||++||+||+.+....+ .+
T Consensus 146 ~~~de~iqLqilk~Ll~~v~s~~~~vhg~~LLkaVR~cyni~l~Sks~~nq~tA~atLtQmv~~VF~R~e~~~~~~~-~~ 224 (1780)
T PLN03076 146 DLGDEGIELLVLKTLLSAVTSTSLRIHGDCLLQAVRTCYDIYLGSKNVVNQTTAKASLIQMLVIVFRRMEADSSTVP-IQ 224 (1780)
T ss_pred cCCchHHHHHHHHHHHHHHcCCCceeEHHHHHHHHHHhheeeecCCcHHHHHHHHHHHHHHHHHHHHHhhccccccc-cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998765444 55
Q ss_pred cchhhhhhhhhhccCCCCCccccccccccccccCCCCCCchhhhhhhhccccCCCCCCCcccccccccccccccccCCcc
Q 000232 223 TISVSELLEFADKSLNEGSSIHFCQNFINEVMGASEGVFEPAMLQLKQNVSTKLPNGDTEVATEDEKGEVVKEGEKGEGE 302 (1822)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1822)
++.+++.+++...+..+++..+++|+|+++++++.++...++...- .. .+...+ .+.+ +.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~--~~~~-----------~~ 284 (1780)
T PLN03076 225 PIVVAELMEPAEKSDSDTSMTQFVQGFITKIMQDIDGVLNPATAGK-----SS--GSGAHD--GAFE-----------TT 284 (1780)
T ss_pred ccccccccccccccccccchhhhhhhhhhhhccccccccCcccccc-----cc--cccccc--cccc-----------cc
Confidence 6666666666666666667778999999988877765433321000 00 000000 0000 00
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCCCcCCCcccccCccCCCCCCCCCCcCCCcccccCccCccccccccCCCCCCCCC
Q 000232 303 VAKEGENGGGRVPKEGETGEGQVPKEGEKGGGQALKEGEKGEGQAPKEGKEGEGQVLKDDEKGEDRVVKEGEKGEGGEGQ 382 (1822)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (1822)
....+.+ +... ... .+.... .++. +...+.. ...+...++..+.+. .
T Consensus 285 ~~~~~~~-~~~~-~~~--~~~~~~--~~~~---~~~~~~~----------------~~~~~~~~~~~~~~~--------~ 331 (1780)
T PLN03076 285 ATVETTN-PADL-LDS--TDKDML--DAKY---WEISMYK----------------SALEGRKGELADGEV--------E 331 (1780)
T ss_pred cccCCCC-cchh-hcc--cccccc--cccc---ccccccc----------------ccccccccccccccc--------c
Confidence 0000000 0000 000 000000 0000 0000000 000000000000000 0
Q ss_pred CCCCCCCCCchhhhhhHHHHHHHHHhhccCCCCCCCCcchhhhhhhHHHHHHHHHHHHcCcccccCcHHHHHHHHHHHHH
Q 000232 383 GNGGAELGGESKIREDGFLLFKNICKLSMKFSSQENPDDLILLRGKILSLELLKVVTDNGGPVWLSNARFLIAIKQFLCL 462 (1822)
Q Consensus 383 ~~~~~~~~~~~~~~~Da~lvfr~LCkLs~k~~~~~~~~d~~~~rsk~lsLeLi~~iL~~~g~~f~~~~~~~~~ik~~Lc~ 462 (1822)
...+.++++.++++||||+|||+|||||||+++.++..|++.+|||+||||||++||+++|++|++||.|+++||+|||+
T Consensus 332 ~~~~~~~~~~~~~~kDAflvFr~lCkLs~K~~~~~~~~d~~~~rsKllsL~Li~~ile~~g~~f~~~~~fi~~ik~~Lc~ 411 (1780)
T PLN03076 332 KDDDLEVQIGNKLRRDAFLVFRALCKLSMKTPPKEALADPQLMRGKILALELLKILLENAGAVFRTSDRFLGAIKQYLCL 411 (1780)
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHhCCCCCCCccccHHHHHHHHHHHHHHHHHHhcccHhhhcCHHHHHHHHHHHHH
Confidence 00122344567899999999999999999999988888999999999999999999999999999999999999999999
Q ss_pred HHHHhcccCchHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhChhHHHHHH
Q 000232 463 SLLKNSALSVMAVFQLQCSIFMSLLSKYRSGLKAEIGIFFPMLVLRVLENVLQPSFVQKMTVLNLLEKISQDSQIIVDVF 542 (1822)
Q Consensus 463 ~L~~n~~S~~~~vf~lsl~If~~L~~~~r~~LK~Eievfl~~i~l~ile~~~~~~~~qk~~vLe~l~~l~~dp~~lveiy 542 (1822)
+|+||++|++++||+++|+|||+|+.+||.|||.||||||++||++++|+..+++++||+++|++|.+||+||++++|||
T Consensus 412 sL~~n~~S~~~~vf~lsl~If~~L~~~~R~~LK~eievF~~~I~l~ile~~~~~s~~qK~~~L~~L~~lc~dp~~lveiy 491 (1780)
T PLN03076 412 SLLKNSASSLMIIFQLSCSIFISLVSRFRAGLKAEIGVFFPMIVLRVLENVAQPNFQQKMIVLRFLDKLCVDSQILVDIF 491 (1780)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHhCccHHHHHH
Confidence 99999999999999999999999999999999999999999999999998767889999999999999999999999999
Q ss_pred HhcCCCCCCccHHHHHHHHHHhhccCCCCCCCCCCCchhhHHHHHhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC-
Q 000232 543 VNYDCDVDSPNIFERIVNGLLKTALGPPPGSTTSLSPAQDIAFRYESVKCLVSIIRSMGTWMDQQLRIGETYLPKGSET- 621 (1822)
Q Consensus 543 ~NYDCd~~~~Nife~lv~~L~k~a~~~~~~~~~~~~~~qe~~l~~~aL~~Lv~il~sl~~w~~~~~~~~~~~~~~~~~~- 621 (1822)
+|||||.+++||||+||+.|+|+|+|.|++.+++..|+||+.+|+.||+||++||+||++|+++++..++.......+.
T Consensus 492 vNYDCD~~~~NifE~lv~~Lsk~a~~~~~~~~~~~~~~qe~~lk~~aLecLv~il~sl~~w~~~~~~~~~~~~~~~~~~~ 571 (1780)
T PLN03076 492 INYDCDVNSSNIFERMVNGLLKTAQGVPPGVETTLLPPQEAAMKLEAMKCLVAILRSMGDWMNKQLRLPDPASLKKLDAV 571 (1780)
T ss_pred hccCCCCCCchHHHHHHHHHHHHhcCCCCccccccCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcccccccchhh
Confidence 9999999999999999999999999988777777788999999999999999999999999998765433211111110
Q ss_pred CCCCCCCC--C--CCCCCCCCCCcCccccCCCCCCChHHHHHHHHhHHHHHHHHhhhccCchhHHHHHHHcCCCCCCHHH
Q 000232 622 DSSIDNNS--I--PNGEDGSVPDYEFHAEVNPEFSDAATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKKVGDSPEE 697 (1822)
Q Consensus 622 ~~s~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~k~~K~~l~~~~~~Fn~~p~~gi~~l~~~~~i~~~p~~ 697 (1822)
..+....+ . .++.+ ...+.....+.+...++++.+|++|++|..+++|+.+||+|||+||+||+++|+++++|++
T Consensus 572 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~k~~K~~l~~g~~~FN~~Pk~Gi~~L~~~~~i~~~p~~ 650 (1780)
T PLN03076 572 ENNLEPGSLPVANGNGDE-NGEGSDSHSELSSETSDAATIEQRRAYKLELQEGISLFNRKPKKGIEFLINANKVGESPEE 650 (1780)
T ss_pred cccccccccccccccccc-ccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHcCCCCCCHHH
Confidence 00000000 0 00000 0011111222223456788999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCChhhHHhhhcccchhHHHHHHHHHHhcCCCCCChhHHHHHHhccCcCCCchHHHHHHHHHHHHHHHHhC
Q 000232 698 VASFLKNTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCN 777 (1822)
Q Consensus 698 iA~fL~~~~~L~k~~iGeyLg~~~~~~~~vl~~y~~~~df~~~~~~~aLR~fl~~frLpgE~q~Idri~e~Fa~~y~~~n 777 (1822)
||+||++++||||++||||||++++++++||++|++.|||+|++||+|||.||++||||||+|+||||||+||+|||+||
T Consensus 651 iA~FL~~~~~Ldk~~iGeyLg~~~~~~~~vl~~yv~~fdF~g~~~d~ALR~fL~~FrLPGEaQ~IdRime~Fa~rY~~~N 730 (1780)
T PLN03076 651 IAAFLKDASGLNKTLIGDYLGEREDLSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCN 730 (1780)
T ss_pred HHHHHHhCCCCCHHHHHHHHcCCChHHHHHHHHHHHhCCcCCCCHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccHHHHHHHHHHHhhhhhhhhhccCCCCHHHHHHhhcCCCCCCCCCHHHHHHHHHHHHhcccccCCCCCCchhh
Q 000232 778 PSSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMNADSSAPESK 857 (1822)
Q Consensus 778 p~~f~~~d~~y~laysiimLntdlhn~~vk~kmt~~~Fi~n~~gi~~~~dlp~~~L~~iY~~I~~~ei~~~~~~~~~~~~ 857 (1822)
|+.|.++|++|+|+||+||||||+|||++|+|||+++|++|+||+|+|+|||+|||++||++|+++||+|++|+.++.++
T Consensus 731 p~~f~~~D~~yvLaysiIMLnTDlHnp~vk~kMt~~~Fi~n~rgin~g~dlp~e~L~~iY~~I~~~ei~~~~~~~~~~~~ 810 (1780)
T PLN03076 731 PKAFSSADTAYVLAYSVIMLNTDAHNPMVKNKMSADDFIRNNRGIDDGKDLPEEFMRSLYERISKNEIKMKEDDLVPQQK 810 (1780)
T ss_pred CCcCCCHHHHHHHHHHHHHHhHHhcCCccCCCCCHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHhCcccCcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987766655
Q ss_pred hhhhhhhhcccccchhhhhhhhHHHHHhhhhHHHHHHHHHHhhhccCCCCCceeecCCchhhhhhHHHhhHHHHHHHHhh
Q 000232 858 QANSLNKLLGLDGILNLVIGKQTEEKALGANGLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVT 937 (1822)
Q Consensus 858 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~r~Mfe~~W~piLaalS~~ 937 (1822)
+....+.+.|++++++.+.|++.+++|+++++++++++++.++++..+.++.|+.++|.+|+|+||+++|+|++||||++
T Consensus 811 ~~~~~~~~~g~~~~~~~~~r~~~~e~~~~~s~~l~~~~~~~~k~~~~~~~~~f~~a~~~~~~~~mfe~~W~p~laalS~~ 890 (1780)
T PLN03076 811 QSANSNRILGLDSILNIVIRKRGEDSYMETSDDLIKHMQEQFKEKARKSESVYYAATDVVILRFMVEVCWAPMLAAFSVP 890 (1780)
T ss_pred cccccchhhhhHHHHhHhhHHHHHHHHHHhHHHHHHHHHHHHHHhhccccCceeecchHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555667788888888889988999999999999999999987776677889999999999999999999999999999
Q ss_pred hhccCcHHHHHHHHHHHHHHHHHHHhhCCchHHHHHHHHHHhhccCCCccccchhhHHHHHHHHHHHhhcCCchhhchHH
Q 000232 938 LDQSDDKLATNQCLQGFRHAVHVTAVMGMQTQRDAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIEDGNHLQEAWEH 1017 (1822)
Q Consensus 938 l~~s~D~~~~~~~L~g~~~~i~ia~~fgL~~~rDafv~sL~kfT~L~~~~~~~~KNv~alraLl~iA~~~Gn~L~~sW~~ 1017 (1822)
|++++|++++..||+||+.||+|||.|||+++||+||++|||||+|+++.+|++||++|+|+||+||+++||+|++||++
T Consensus 891 ~~~s~d~~~~~~cL~G~~~~i~ia~~f~l~~~rdafv~~L~kfT~L~~~~emk~Knv~Aik~ll~ia~~~Gn~L~~sW~~ 970 (1780)
T PLN03076 891 LDQSDDEVVTFQCLEGFRHAIHVTAVMSMKTHRDAFVTSLAKFTSLHSPADIKQKNIDAIKAIVSIADEDGNYLQEAWEH 970 (1780)
T ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHcCCCChhhhhHHHHHHHHHHHHHHHHhhhHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccccccchhhhh-hhcccCCCCCccccCCCCCCcchhhccCCcccccccCCCCCCCCC
Q 000232 1018 ILTCLSRIEHLQLLGEGAPTDASFLTVSNVEADE-KTQKSMGFPSLKKKGTLQNPSVMAVVRGGSYDSTTVGVNSPGLVT 1096 (1822)
Q Consensus 1018 IL~~is~le~lqli~~g~~~d~~~~~~p~~~~~~-~~~~~~~~~s~~~~~~~q~~~~~~~~~~~s~~st~~~~~~~~~lt 1096 (1822)
||+|||+|||+|||+.|++||..+...|..+.+. +..++...|...++++.+.+...+..+++++++...++.....++
T Consensus 971 IL~cISqLerl~Li~~gv~~d~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 1050 (1780)
T PLN03076 971 ILTCVSRFEHLHLLGEGAPPDATFFAAPQNESDKSKQAKSPILPVLKRKGPGKLQYAAAAVRRGSYDSAGVGGKASGVVT 1050 (1780)
T ss_pred HHHHHHHHHHHHHhhcCCCcchhhhcccccccccccccccccccccccccccccchhhhhhcccccccccccccccccCC
Confidence 9999999999999999999987766555444332 222333444444333332222223344667776655555566788
Q ss_pred HHHHHHHhhhhhhhhhhhccchHHHHHhcccCCHHHHHHHHHHHHHhchhhcCCCCCCccchHHHHHHHHhhcccccccc
Q 000232 1097 PEQINHFIANLNLLDQIGNFELNHVFAHSQRLNSEAIVAFVKALCKVSISELQSPTDPRVFSLTKLVEIAHYNMNRIRLV 1176 (1822)
Q Consensus 1097 ~eei~~~~~~~~~l~~i~~~~id~lF~~S~~L~~~Ai~~Fv~ALc~vS~eEl~s~~~Pr~FsLqKLveVa~~Nm~Rirl~ 1176 (1822)
++++.....++++++.|+++.+|+||++|++|+++||++||+|||+||++|+++++.||+|+|+|||||++|||+|||++
T Consensus 1051 ~~~~~~~~~~l~~l~~i~~~~idkIF~~S~~L~~eai~~fv~AL~~vS~eEl~~~~~pr~FsLqKLveIa~~Nm~Rirl~ 1130 (1780)
T PLN03076 1051 SEQMNNLVSNLNMLEQVGSFEMNRIFTRSQKLNSEAIIDFVKALCKVSMEELRSPSDPRVFSLTKIVEIAHYNMNRIRLV 1130 (1780)
T ss_pred HHHHHHHHhhhhhhhhhhhhHHHHHHHhcccCCHHHHHHHHHHHHHhhHHHHccCCCCchhHHHHHHHHHHhcccchhee
Confidence 88988877777778889999999999999999999999999999999999999888899999999999999999999999
Q ss_pred hhhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHhchhhhhchhhhhhhHHHHHHHHhccCChHHHHHHHHHHHHH
Q 000232 1177 WSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIIMQKSGSAEIRELIIRCISQM 1256 (1822)
Q Consensus 1177 W~~IW~~L~~hf~~vg~h~n~~va~~AiDsLrqLs~kfLe~eEL~~f~FQ~~fLkPfe~im~~~~~~eIre~IL~cl~qm 1256 (1822)
|++||+++++||+++|||+|..|++||+|+||||||||++++||+||+||++||+||++||.++.+.+|||+|++|+.||
T Consensus 1131 W~~iW~~l~~hf~~vg~~~n~~va~fAidsLrQLs~kfle~eEL~~f~FQkefLkPfe~im~~s~~~eVrE~ILeCv~qm 1210 (1780)
T PLN03076 1131 WSSIWHVLSDFFVTIGCSENLSIAIFAMDSLRQLSMKFLEREELANYNFQNEFMKPFVIVMRKSNAVEIRELIIRCVSQM 1210 (1780)
T ss_pred hHhHHHHHHHHHHHhcCCcchhHHHHHHHHHHHHHHHhcchhhhhchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccccCcHHHHHHHHHhhccchHHHHHHHHHHHHHHHhcccCcccccccchHHHHHHHHHHHHcCCCCccccHHH
Q 000232 1257 VLSRVSNVKSGWKSVFSIFTAAAADERKNIVLLAFETMEKIVREYFPHITETESTTFTDCVKCLLTFTNSRFNSDVCLNA 1336 (1822)
Q Consensus 1257 l~~~~~~IkSGWk~IF~iL~~aa~~~~~~iV~~aF~~l~~I~~d~l~~l~~~~~~~f~d~I~cL~~F~~~~~d~niSL~A 1336 (1822)
|++++++|+||||+||+||+.|+.++++.+|+.||+++++|++|||+.++.+.+++|.|||+||.+|++++.++||||+|
T Consensus 1211 I~s~~~nIkSGWktIF~VLs~aa~d~~e~iV~lAFetl~~I~~d~f~~l~~~~~~~F~DlV~cL~~Fa~q~~~~nISL~A 1290 (1780)
T PLN03076 1211 VLSRVNNVKSGWKSMFMVFTTAAYDDHKNIVLLAFEIIEKIIREYFPYITETETTTFTDCVNCLIAFTNSRFNKDISLNA 1290 (1780)
T ss_pred HHHHHhhhhcCcHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHhhhhhccccchhHHHHHHHHHHHHHhCcCcccccHHH
Confidence 99999999999999999999999999999999999999999999999887555699999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCcccccCCCCCCC-CCCC--CCCCCCcccCCCCcccchhhHHHHHHHHHhhccCChHHHHHHHHHH
Q 000232 1337 IAFLRFCAVKLADGGLVCNEKGSVDGS-SSPP--VNDNAPDLQSFSDKDDNSSFWVPLLTGLSKLTSDSRSTIRKSSLEV 1413 (1822)
Q Consensus 1337 I~~L~~~~d~L~~~~~~~~~~~~~~~~-~~~p--~~~~~~~~~~~~~~~~~~~lW~pLL~~Ls~l~~d~R~eVR~~Alqt 1413 (1822)
|++||.|+++++++++.+..+...... +..+ ......+...+.+.+.+.++|||||++|++++.|+|+|||++||+|
T Consensus 1291 I~lL~~~~~~La~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~lW~pLL~~Ls~l~~D~RlEVR~~ALqt 1370 (1780)
T PLN03076 1291 IAFLRFCATKLAEGDLGSSSRNKDKEAPPSSPQSGKDGKQESGEFTDKDDHLYFWFPLLAGLSELSFDPRPEIRKSALQV 1370 (1780)
T ss_pred HHHHHHHHHHHHhccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 999999999998775432211100000 0000 0111111122345556778999999999999999999999999999
Q ss_pred HHHHHHhcCCCCChhHHHHHHHHhHHhhhhhccccCCCCCCCCCCCCCC--CCCCccccccHHHhHHHHHHHHHHHHHhh
Q 000232 1414 LFNILKDHGHLFPRQFWMGVYSHVIFPIFNGVCDKKDMPDKDEPDSPTS--HSPLSEGSTWDSETAAIGAECLVDIFICF 1491 (1822)
Q Consensus 1414 LF~iL~~~G~~f~~~~W~~i~~~VLfPlfd~l~~~~~~~~~~~~~~~~~--~~~~~~~~~W~~eT~~laL~~lv~lf~~y 1491 (1822)
||+||..||+.|++++|+.||++||||||+.++..++.....+++.+.. ...+.+.++|++|||++||+++++||++|
T Consensus 1371 LF~iL~~yG~~Fs~~~W~~if~~VLFPIFd~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~Wl~eT~~~AL~~lvdLft~f 1450 (1780)
T PLN03076 1371 LFDTLRNHGHLFSLPLWERVFESVLFPIFDYVRHAIDPSGGDEPEGQGVDGDQGELDQDAWLYETCTLALQLVVDLFVKF 1450 (1780)
T ss_pred HHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987655433221111100 11235789999999999999999999999
Q ss_pred hchhhhhHHHHHHHHHHhhcCCCcchhHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHhhccchhHHhhcccCCCCC
Q 000232 1492 FDVVRSQLPGVVSILTGFIRSPIQGPASTGVAALLHLAGELGSRLSQDEWREILLALKETTASTLPSFVKVLRTMNDIEI 1571 (1822)
Q Consensus 1492 f~~l~~~w~~lL~lL~~~i~~~~~~ia~~g~~~L~~Ll~~~~~~f~~~~W~~i~~~l~~~f~~T~p~~~~~~~~~~~~~~ 1571 (1822)
|+.+..+++++|++|.+||+|+|++|||+|++||++||..||++|++++|++|+++|.++|+.|+|+|........ .
T Consensus 1451 Fd~L~~~L~~~l~ll~~ci~q~n~~la~ig~~~l~~li~~ng~~F~~~~W~~i~~~~~~lf~~T~p~~~~~~~~~~---~ 1527 (1780)
T PLN03076 1451 YPTVNPLLKKVLMLLVSFIKRPHQSLAGIGIAAFVRLMSNAGHLFSDEKWLEVVLSLKEAANATLPDFSYVVSGEY---M 1527 (1780)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhCCchhhcccccc---c
Confidence 9999999999999999999999999999999999999999999999999999999999999999999764321110 1
Q ss_pred CCCCCcccccccCCCCCCCCCCCchhhhhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHH
Q 000232 1572 PNTSQSYADMEMDSDHGSINDNIDEDNLQTAAYVVSRMKSHITLQLLSVQVAANLYKLHLRLLSTTNVKILLDIFSSIAS 1651 (1822)
Q Consensus 1572 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cvlQLlLIq~~~el~~~~~~~l~~~~l~~L~~~L~~s~~ 1651 (1822)
|.......+.+....+....+.......++....+.++|||||+||||||+++|||+++|.+||++|+++|++||++||+
T Consensus 1528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~kc~~v~QLllI~~~~~l~~~~~~~l~~~~l~~l~~~L~~s~~ 1607 (1780)
T PLN03076 1528 PAENIQDSENAEAASSSTADNDAEAERSRRLYAAISDAKCRAAVQLLLIQAVMEIYNMYRPRLSAKNTLVLFDALHTVAS 1607 (1780)
T ss_pred ccccccccccccccccccccchhhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH
Confidence 21110101110000000011111111122332244457888899999999999999999999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHhhhcccCCCCCchhhhhhHHHHHHHHHHHHhcCCCCchhHHhHHHHHHHHHHHHHHHHHccCc
Q 000232 1652 HAHELNSELVLQKKLQRVCLVLELSDPPMVHFENESYQTYLNFLRDSLTGNPSASEELNIESHLVEACEMILQMYLNCTG 1731 (1822)
Q Consensus 1652 fA~~FN~d~~LR~~L~k~g~~~~~~~PnLLkQEt~S~~~~l~iLf~m~~d~~~~~~~~~ie~~L~~lc~~il~~Y~~~~~ 1731 (1822)
|||+||+|++||++|||+|||+++++|||||||++|+++|++|||+||+|+++...+.++|++|+++|.+||++|+++++
T Consensus 1608 fA~~fN~d~~lR~~l~~~g~~~~~~~PnLLkqE~~s~~~~l~il~~~~~d~~~~~~~~~~~~~l~~~c~~il~~y~~l~~ 1687 (1780)
T PLN03076 1608 HAHKINSDTALRSKLQELGSMTQMQDPPLLRLENESYQICLTFLQNLILDKPPLAKEAEVESRLVELCEEVLQFYIETST 1687 (1780)
T ss_pred HHHHhcCcHHHHHHHHHhhhcccCCCCchhhHhHHHHHHHHHHHHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999989999999999999999999999999998889999999999999999999999998
Q ss_pred chhHHHHhhhhhhhhhccCCchhhhHhhhhhHHHHHHHHHhhcCChHHHHhHhhhhhHHHHHHHhcCCCchhHHHHHHHH
Q 000232 1732 QQKVKAVKQQRVVRWILPLGSARKEELAARTSLVVSALRVLSGLERETFKKYLSNIFPLLIDLVRSEHSSREVQLVLGTM 1811 (1822)
Q Consensus 1732 ~~~~~~~~~~~~~~~~~p~~~~~~r~i~aw~pvvv~iL~~l~~l~~~~F~~~~~~~ypll~~Li~~e~~~~e~r~~l~~~ 1811 (1822)
.+|.+..+.+..++|.+|+|++++||++||+||||+||+||++||+++|++|+|.||||+|+|++||+.++|||.||++|
T Consensus 1688 ~~~~~~~~~~~~~~~~~p~~~~~~r~i~a~~pv~v~il~~~~~l~~~~f~~~~~~~y~l~~~l~~~e~~~~e~r~~l~~~ 1767 (1780)
T PLN03076 1688 AGQDSEDSSSQQPRWLIPLGSGKRRELAARAPLVVATLQAVCGLGDSSFEKNLVRFFPLLAGLISCEHGSNEVQVALSDM 1767 (1780)
T ss_pred ccccccccccccccccccccchhHHHHHhcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence 55422222334469999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHhhhhccccC
Q 000232 1812 FQSCIGPILLQ 1822 (1822)
Q Consensus 1812 ~~~rvg~~~~~ 1822 (1822)
|++||||++++
T Consensus 1768 ~~~rvg~~~~~ 1778 (1780)
T PLN03076 1768 LSSWVGPVLLQ 1778 (1780)
T ss_pred HHHHhhhhHhc
Confidence 98899999874
|
|
| >KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG5307 SEC7 domain proteins [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1848 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0930 consensus Guanine nucleotide exchange factor Cytohesin, contains PH and Sec7 domains [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd00171 Sec7 Sec7 domain; Domain named after the S | Back alignment and domain information |
|---|
| >PF01369 Sec7: Sec7 domain; InterPro: IPR000904 The SEC7 domain was named after the first protein found to contain such a region [] | Back alignment and domain information |
|---|
| >smart00222 Sec7 Sec7 domain | Back alignment and domain information |
|---|
| >KOG0931 consensus Predicted guanine nucleotide exchange factor, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal | Back alignment and domain information |
|---|
| >KOG0932 consensus Guanine nucleotide exchange factor EFA6 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins | Back alignment and domain information |
|---|
| >KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional | Back alignment and domain information |
|---|
| >KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
| >PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous [] | Back alignment and domain information |
|---|
| >PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II | Back alignment and domain information |
|---|
| >PF11864 DUF3384: Domain of unknown function (DUF3384); InterPro: IPR024584 This entry represents the N-terminal domain of tuberin which is functionally uncharacterised | Back alignment and domain information |
|---|
| >PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] | Back alignment and domain information |
|---|
| >KOG1848 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1822 | ||||
| 3ltl_A | 211 | Crystal Structure Of Human Big1 Sec7 Domain Length | 3e-56 | ||
| 1r8q_E | 203 | Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A | 1e-53 | ||
| 1r8s_E | 203 | Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain C | 3e-53 | ||
| 1r8m_E | 203 | Sec7 Domain Of The Arf Exchange Factor Arno With Br | 2e-52 | ||
| 1pbv_A | 195 | Sec7 Domain Of The Exchange Factor Arno Length = 19 | 4e-51 | ||
| 2r0d_A | 347 | Crystal Structure Of Autoinhibited Form Of Grp1 Arf | 4e-50 | ||
| 1bc9_A | 200 | Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average | 1e-49 | ||
| 4a4p_A | 192 | Crystal Structure Of The Sec7 Domain From Human Cyt | 2e-49 | ||
| 3l8n_A | 202 | Crystal Structure Of A Domain Of Brefeldin A-Inhibi | 2e-49 | ||
| 2r09_A | 347 | Crystal Structure Of Autoinhibited Form Of Grp1 Arf | 1e-48 | ||
| 1xsz_A | 356 | The Structure Of Ralf Length = 356 | 1e-28 | ||
| 1re0_B | 221 | Structure Of Arf1-Gdp Bound To Sec7 Domain Complexe | 9e-28 | ||
| 1ku1_A | 230 | Crystal Structure Of The Sec7 Domain Of Yeast Gea2 | 5e-27 | ||
| 1xt0_B | 203 | The Structure Of N-Terminal Sec7 Domain Of Ralf Len | 9e-27 |
| >pdb|3LTL|A Chain A, Crystal Structure Of Human Big1 Sec7 Domain Length = 211 | Back alignment and structure |
|
| >pdb|1R8Q|E Chain E, Full-Length Arf1-Gdp-Mg In Complex With Brefeldin A And A Sec7 Domain Length = 203 | Back alignment and structure |
| >pdb|1R8S|E Chain E, Arf1[delta1-17]-Gdp In Complex With A Sec7 Domain Carrying The Mutation Of The Catalytic Glutamate To Lysine Length = 203 | Back alignment and structure |
| >pdb|1R8M|E Chain E, Sec7 Domain Of The Arf Exchange Factor Arno With Brefeldin A- Sensitizing Mutations Length = 203 | Back alignment and structure |
| >pdb|1PBV|A Chain A, Sec7 Domain Of The Exchange Factor Arno Length = 195 | Back alignment and structure |
| >pdb|2R0D|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 | Back alignment and structure |
| >pdb|1BC9|A Chain A, Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average Structure Length = 200 | Back alignment and structure |
| >pdb|4A4P|A Chain A, Crystal Structure Of The Sec7 Domain From Human Cytohesin1 Length = 192 | Back alignment and structure |
| >pdb|3L8N|A Chain A, Crystal Structure Of A Domain Of Brefeldin A-Inhibited Guanine Nucleotide-Exchange Protein 2 (Brefeldina-Inhibited Gep 2) From Homo Sapiens (Human). Northeast Structural Genomics Consortium Target Id Hr5562a Length = 202 | Back alignment and structure |
| >pdb|2R09|A Chain A, Crystal Structure Of Autoinhibited Form Of Grp1 Arf Gtpase Exchange Factor Length = 347 | Back alignment and structure |
| >pdb|1XSZ|A Chain A, The Structure Of Ralf Length = 356 | Back alignment and structure |
| >pdb|1RE0|B Chain B, Structure Of Arf1-Gdp Bound To Sec7 Domain Complexed With Brefeldin A Length = 221 | Back alignment and structure |
| >pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of Yeast Gea2 Length = 230 | Back alignment and structure |
| >pdb|1XT0|B Chain B, The Structure Of N-Terminal Sec7 Domain Of Ralf Length = 203 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1xsz_A Guanine nucleotide exchange protein; ARF guanine nucleotide exchange factor, signaling protein; 1.41A {Legionella pneumophila} SCOP: a.118.3.1 d.129.9.1 PDB: 1xt0_B Length = 356 | Back alignment and structure |
|---|
Score = 326 bits (837), Expect = e-100
Identities = 89/360 (24%), Positives = 148/360 (41%), Gaps = 33/360 (9%)
Query: 654 AATLEQRRAYKIELQKGISLFNRKPSKGIEFLINSKK--VGDSPEEVASFL-KNTTGLNE 710
A+ E +A + + I FN KP GI + + EE+A F + L+
Sbjct: 2 ASHPEIEKAQR----EIIEAFNAKPKNGINKIKEICEQYKISPNEEIAEFFHQQRKNLDL 57
Query: 711 TMIGDYLGEREEFSLKVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFA 770
+GDYL E + +V+ A+ NF G F +R FL+ F+LPGEAQKIDR+++ F+
Sbjct: 58 EAVGDYLSSPEAENQQVLKAFTSQMNFNGQSFVEGLRTFLKTFKLPGEAQKIDRLVQSFS 117
Query: 771 ERYCKCNPSSFTSADTAYVLAYSVIMLNTDAHNSMV--KDKMTKADFIRNNRGIDDGKDL 828
Y + NP ++AD AY+LA+ IMLNTD HN + K+KMT RN RG ++G D
Sbjct: 118 GAYFQQNPDVVSNADAAYLLAFQTIMLNTDLHNPSIPEKNKMTVDGLKRNLRGGNNGGDF 177
Query: 829 PEEYLGVLYDQIVKNEIKMNADSSAPESKQANSLNKLLGLDGILNLVIGKQTEEKALGAN 888
++L LY +I ++N ++P + ++
Sbjct: 178 DAKFLEELYSEIKAKPFELNFVKTSPGYELTSTTLN-----------------------K 214
Query: 889 GLLIRRIQEQFKSKSGKSESLYHAVTDPGILRFMVEVCWGPMLAAFSVTLDQSDDKLATN 948
+++ S +++ + D W + T+ +D+K +
Sbjct: 215 DSTFKKLDSFLHSTDVNINTVFPGIGDNVKTTVDQPKSWLSFFTGYKGTITLTDNKTSAQ 274
Query: 949 QCLQGFRHAVHVTAVMGMQTQR-DAFVTSVAKFTYLHCAADMKQKNVDAVKAIISIAIED 1007
+Q + + + G Q + + AA V KA + D
Sbjct: 275 ATIQVYTPNIFSKWLFGEQPRVIIQPGQTKESIDLAAKAAADFSSPVKNFKATYDYEVGD 334
|
| >1r8s_E ARNO; protein transport/exchange factor, protein transport-exchang complex; HET: GDP; 1.46A {Homo sapiens} SCOP: a.118.3.1 PDB: 1r8m_E* 1r8q_E* 1s9d_E* 1pbv_A 1bc9_A Length = 203 | Back alignment and structure |
|---|
| >3ltl_A Brefeldin A-inhibited guanine nucleotide-exchange 1; all alpha, guanine-nucleotide releasing factor, signaling PR; 2.20A {Homo sapiens} PDB: 3l8n_A 3swv_A Length = 211 | Back alignment and structure |
|---|
| >2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A* Length = 347 | Back alignment and structure |
|---|
| >1ku1_A ARF guanine-nucleotide exchange factor 2; SEC7 domain, guanine nucleotide exchange factor (GEF), ARF small GTP-binding proteins; 1.93A {Saccharomyces cerevisiae} SCOP: a.118.3.1 PDB: 1re0_B* Length = 230 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1822 | ||||
| d1r8se_ | 187 | a.118.3.1 (E:) Exchange factor ARNO {Human (Homo s | 4e-83 | |
| d1xsza1 | 197 | a.118.3.1 (A:1-197) RalF, N-terminal domain {Legio | 2e-77 | |
| d1ku1a_ | 211 | a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 | 1e-75 | |
| d1b0ba_ | 142 | a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) | 4e-04 |
| >d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} Length = 187 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Sec7 domain family: Sec7 domain domain: Exchange factor ARNO species: Human (Homo sapiens) [TaxId: 9606]
Score = 267 bits (685), Expect = 4e-83
Identities = 101/185 (54%), Positives = 127/185 (68%)
Query: 666 ELQKGISLFNRKPSKGIEFLINSKKVGDSPEEVASFLKNTTGLNETMIGDYLGEREEFSL 725
++ G FN P KGI+FL+ ++ + ++PEE+A FL GLN+T IGDYLGEREE +L
Sbjct: 3 KMAMGRKKFNMDPKKGIQFLVENELLQNTPEEIARFLYKGEGLNKTAIGDYLGEREELNL 62
Query: 726 KVMHAYVDSFNFKGMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNPSSFTSAD 785
V+HA+VD F ++ A+R FL FRLPG+AQKIDR+ME FA+RYC CNP F S D
Sbjct: 63 AVLHAFVDLHEFTDLNLVQALRQFLWSFRLPGKAQKIDRMMEAFAQRYCLCNPGVFQSTD 122
Query: 786 TAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEI 845
T YVL+YSVIMLNTD HN V+DKM F+ NRGI++G DLPEE L LYD I
Sbjct: 123 TCYVLSYSVIMLNTDLHNPNVRDKMGLERFVAMNRGINEGGDLPEELLRNLYDSIRNEPF 182
Query: 846 KMNAD 850
K+ D
Sbjct: 183 KIPED 187
|
| >d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} Length = 197 | Back information, alignment and structure |
|---|
| >d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 211 | Back information, alignment and structure |
|---|
| >d1b0ba_ a.1.1.2 (A:) Hemoglobin I {Clam (Lucina pectinata) [TaxId: 29163]} Length = 142 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1822 | |||
| d1ku1a_ | 211 | ARF guanine-exchange factor 2, Gea2 {Baker's yeast | 100.0 | |
| d1r8se_ | 187 | Exchange factor ARNO {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xsza1 | 197 | RalF, N-terminal domain {Legionella pneumophila [T | 100.0 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 97.88 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 97.63 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 97.31 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 95.87 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 94.01 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 92.72 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 92.5 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 92.11 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 90.36 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 87.69 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 87.63 |
| >d1ku1a_ a.118.3.1 (A:) ARF guanine-exchange factor 2, Gea2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Sec7 domain family: Sec7 domain domain: ARF guanine-exchange factor 2, Gea2 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=425.97 Aligned_cols=186 Identities=38% Similarity=0.649 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC-CHHHHHHHHH-CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 995999999986520695247999997499999-9798999875-08999945687320146215799999998706999
Q 000232 661 RAYKIELQKGISLFNRKPSKGIEFLINSKKVGD-SPEEVASFLK-NTTGLNETMIGDYLGEREEFSLKVMHAYVDSFNFK 738 (1822)
Q Consensus 661 k~~K~~l~~~~~~FN~~p~~gi~~l~~~~~i~~-~p~~iA~fL~-~~~~L~k~~igeyLg~~~~~~~~vl~~yv~~~df~ 738 (1822)
+++|..+.+|+.+||++|++||+||+++|++++ +|++||+||+ .+++|||.+||+|||+++ +.+||++|++.|||+
T Consensus 9 ~~rK~~~~~~v~~FN~~pk~Gi~~L~~~~~i~~~~~~~iA~FL~~~~~~Ldk~~iGeyLg~~~--n~~vL~~y~~~fdf~ 86 (211)
T d1ku1a_ 9 MDRKTEFIECTNAFNEKPKKGIPMLIEKGFIASDSDKDIAEFLFNNNNRMNKKTIGLLLCHPD--KVSLLNEYIRLFDFS 86 (211)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHTTSSSCSSHHHHHHHHHHTTTTSCHHHHHHHHTCGG--GHHHHHHHHHTSCCT
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCC--HHHHHHHHHHCCCCC
T ss_conf 999999999999980499999999998888499998999999986578889899999977984--689999998524768
Q ss_pred CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC---------------CCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9990699999851476898557899999999999987299---------------9999901799999999972210010
Q 000232 739 GMDFGHAIRFFLRGFRLPGEAQKIDRIMEKFAERYCKCNP---------------SSFTSADTAYVLAYSVIMLNTDAHN 803 (1822)
Q Consensus 739 ~~~~~~ALR~fl~~frlpgE~q~idri~e~Fa~~y~~~Np---------------~~f~~~d~~y~laysiimLntdlHn 803 (1822)
|++|++|||.||.+||||||+|+|||+|++||++||+||| ..|.++|++|+|+||+||||||+||
T Consensus 87 ~~~id~ALR~~l~~f~LPgEaQ~IdRile~Fa~~Y~~~N~~~~~~~~~~~~~~~~~~f~s~d~~y~L~ysiimLnTdlHn 166 (211)
T d1ku1a_ 87 GLRVDEAIRILLTKFRLPGESQQIERIIEAFSSAYCENQDYDPSKISDNAEDDISTVQPDADSVFILSYSIIMLNTDLHN 166 (211)
T ss_dssp TCCHHHHHHHHTTTCCCCSSHHHHHHHHHHHHHHHHHTSCCCGGGCCSCCTTCGGGCCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99789999999984508860899999999984999962888841000000001111225710899999999997002038
Q ss_pred HHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 001699887879873067889999989899999999872524557
Q 000232 804 SMVKDKMTKADFIRNNRGIDDGKDLPEEYLGVLYDQIVKNEIKMN 848 (1822)
Q Consensus 804 ~~vk~kmt~~~Fi~n~~gi~~~~dlp~~~L~~iY~~I~~~ei~l~ 848 (1822)
|++|+|||+++|++|+||+|+|+|+|+++|++||++|+.+||+|+
T Consensus 167 p~vk~kMt~~~Fi~n~rgin~~~d~~~e~L~~iY~~I~~~ei~lP 211 (211)
T d1ku1a_ 167 PQVKEHMSFEDYSGNLKGCCNHKDFPFWYLDRVYCSIRDKEIVMP 211 (211)
T ss_dssp TTCSSCCCHHHHHHHTTTCBTTBCCCHHHHHHHHHHHHHSCCCCC
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 755678899999999866767788999999999999985877799
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| >d1r8se_ a.118.3.1 (E:) Exchange factor ARNO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
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| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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