Citrus Sinensis ID: 000316
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1678 | 2.2.26 [Sep-21-2011] | |||||||
| Q55FJ0 | 2179 | Probable inactive serine/ | yes | no | 0.206 | 0.158 | 0.362 | 2e-70 | |
| D4A929 | 1933 | WD repeat-containing prot | yes | no | 0.208 | 0.181 | 0.396 | 2e-68 | |
| Q562E7 | 1941 | WD repeat-containing prot | yes | no | 0.215 | 0.186 | 0.404 | 4e-68 | |
| Q5ND34 | 1934 | WD repeat-containing prot | yes | no | 0.215 | 0.187 | 0.406 | 8e-67 | |
| Q10122 | 1336 | Uncharacterized WD repeat | yes | no | 0.132 | 0.166 | 0.456 | 1e-50 | |
| Q6ZS81 | 3184 | WD repeat- and FYVE domai | no | no | 0.140 | 0.073 | 0.331 | 3e-27 | |
| Q6VNB8 | 3508 | WD repeat and FYVE domain | no | no | 0.159 | 0.076 | 0.290 | 9e-27 | |
| Q8IZQ1 | 3526 | WD repeat and FYVE domain | no | no | 0.138 | 0.066 | 0.317 | 1e-26 | |
| Q9W4E2 | 3578 | Neurobeachin OS=Drosophil | no | no | 0.157 | 0.073 | 0.299 | 3e-26 | |
| Q9EPN1 | 2936 | Neurobeachin OS=Mus muscu | no | no | 0.139 | 0.079 | 0.308 | 4e-25 |
| >sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein kinase lvsG OS=Dictyostelium discoideum GN=lvsG PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 232/472 (49%), Gaps = 126/472 (26%)
Query: 221 PSFDESSVPGCLR-HPNVAPVLGLLKTSGL--------------------ITSVIPKTPY 259
PS D +S P L+ HPN+ P++ ++ I + K Y
Sbjct: 335 PSIDYTS-PNVLKLHPNLLPIIEIIYNDIDNNDNDNDDDDDKNNNNLNDKIFIIYKKYNY 393
Query: 260 TLENILQFSPNALKSEWHVR-FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318
TL+ +L++S L+ + F++YQL+ ++LH I H + PSN+ L + W L
Sbjct: 394 TLDGLLRYSLQYLQRNQKITTFMIYQLIQLFSFLHQREIVHGDLQPSNIHLNNQMWLGL- 452
Query: 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378
GF + P++P+ +E + S N+W GEL
Sbjct: 453 ------EGF-------SFPSTPLYHQPLEN----------------QFESSMNKWINGEL 483
Query: 379 SNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKP---DENFDS--------------- 420
SNF YL+ LN LA R GD H V+PWVIDF+T P D + DS
Sbjct: 484 SNFNYLMILNHLAHRHIGDPMNHPVLPWVIDFTTSPINIDNDNDSRDDVDNSSSSNNNNN 543
Query: 421 -----------GSRDLSKSKWRLAKGDEQLDFTYSSS----------------------- 446
G RDL+K+K+RL KGDEQLDF + ++
Sbjct: 544 NNNEDQSGKTVGWRDLTKTKYRLNKGDEQLDFQFFNTGNSTTLGDDSMGGGIGSIGSTGG 603
Query: 447 ----------------EIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPS 490
HH+SD LSEL SY ARR + +LR VR+ YEPNEYP+
Sbjct: 604 ITNSSNNGGGGGSGNSGKAHHISD-ILSELTYYSYLARRTSVPLLRRFVRTNYEPNEYPA 662
Query: 491 TMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWA--GSPEEFIKLHRDALESDR 548
TM+RLY+WTPDECIPEF+ D IF S H M DL +P W S +EFIK+H +ALESD
Sbjct: 663 TMERLYRWTPDECIPEFFTDSTIFKSIHSDMPDLQLPDWVPNQSTQEFIKIHMNALESDH 722
Query: 549 VSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHP 600
VS ++H WID+TFGY +SG+ AI AKN+ L + T P++ G +QLF PHP
Sbjct: 723 VSKQLHSWIDLTFGYLLSGEEAIKAKNLAL--MDTTIPRNNGIVQLFNHPHP 772
|
Dictyostelium discoideum (taxid: 44689) |
| >sp|D4A929|WDR81_RAT WD repeat-containing protein 81 OS=Rattus norvegicus GN=Wdr81 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 221/416 (53%), Gaps = 66/416 (15%)
Query: 221 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVR 279
PS S+ P LR LL++ ++ V P ++L +++ FSP L S+ V
Sbjct: 204 PSRGSSACPSLLR------AEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVL 257
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC-----------------DK 322
F+++++L A+ H G+A ++ ++ + + S L + +K
Sbjct: 258 FILFRVLRAMDACHRQGLACGALSLHHIAVDEKLCSELRLDLSAYEMPSEDENQEVSEEK 317
Query: 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382
G S D P GC +GL D W G +SNF
Sbjct: 318 DRTGVKSEKDGEGRP-----GCPTCQKELRGLVLD---------------WVHGRVSNFY 357
Query: 383 YLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFT 442
YL+ LN+LAGRR GD +H V+PWV+DF+T P F RDL KSK+RL KGD+QLDFT
Sbjct: 358 YLMQLNRLAGRRQGDPNYHPVLPWVVDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFT 412
Query: 443 YSSSE---------------IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNE 487
Y + +PHH+SD LS++ YKARR P SVL VR+ +EP+E
Sbjct: 413 YEMTRQAFVAGGAGSGEPLHVPHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHE 471
Query: 488 YPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESD 547
YP+TM+R+ WTPDECIPEFY DP IF S HP M DL VP W S +EF+ HR LES
Sbjct: 472 YPATMERMQTWTPDECIPEFYTDPSIFCSIHPDMPDLDVPAWCSSNQEFVTAHRALLESW 531
Query: 548 RVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
VS +HHWID+TFGYK+ G+ A+ KNV L + T S G +QLF QPHP R
Sbjct: 532 EVSQDLHHWIDLTFGYKLQGKEAVKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 587
|
Rattus norvegicus (taxid: 10116) |
| >sp|Q562E7|WDR81_HUMAN WD repeat-containing protein 81 OS=Homo sapiens GN=WDR81 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 261 bits (667), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 217/391 (55%), Gaps = 29/391 (7%)
Query: 229 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 287
P C P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L
Sbjct: 213 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLR 269
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347
A+ H G+A ++ ++ + + S L + D + P + I
Sbjct: 270 AMDACHRQGLACGALSLYHIAVDEKLCSELRL-DLSAYERPEEDENEEAPVA-RDEAGIV 327
Query: 348 GCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWV 407
QG Q + S W G +SNF YL+ LN+LAGRR GD +H V+PWV
Sbjct: 328 SQEEQGGQPGQPTGQE-ELRSLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWV 386
Query: 408 IDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPHHV 452
+DF+T P F RDL KSK+RL KGD+QLDFTY + +PHH+
Sbjct: 387 VDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGGGEPPHVPHHI 441
Query: 453 SDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQ 512
SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY DP
Sbjct: 442 SD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFYTDPS 500
Query: 513 IFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAID 572
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 501 IFRSIHPDMPDLDVPAWCSSSQEFVAAHRALLESREVSRDLHHWIDLTFGYKLQGKEAVK 560
Query: 573 AKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
KNV L + T S G +QLF QPHP R
Sbjct: 561 EKNVCLHLVDAHTHLASYGVVQLFDQPHPQR 591
|
Homo sapiens (taxid: 9606) |
| >sp|Q5ND34|WDR81_MOUSE WD repeat-containing protein 81 OS=Mus musculus GN=Wdr81 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 256 bits (655), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 159/391 (40%), Positives = 217/391 (55%), Gaps = 29/391 (7%)
Query: 229 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 287
P C P++ LL++ ++ V P ++L +++ FSP L S+ V FL++++L
Sbjct: 211 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFLLFRVLR 267
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347
A+ H G+A ++ ++ + + S L + D S D + G I+
Sbjct: 268 AMDACHRQGLACGALSLHHIAVDEKLCSELRL-DLSAYEMPS-EDENQEGSEEKNGTGIK 325
Query: 348 GCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWV 407
+ Q + W G +SNF YL+ LN+LAGRR GD +H V+PWV
Sbjct: 326 SEKEGEGRTECPTCQK-ELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWV 384
Query: 408 IDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPHHV 452
+DF+T P F RDL KSK+RL KGD+QLDFTY + +PHH+
Sbjct: 385 VDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGSGEPPHVPHHI 439
Query: 453 SDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQ 512
SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+ WTPDECIPEFY DP
Sbjct: 440 SD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQTWTPDECIPEFYTDPS 498
Query: 513 IFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAID 572
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 499 IFCSIHPDMPDLDVPAWCSSNQEFVAAHRALLESWEVSQDLHHWIDLTFGYKLQGKEAVK 558
Query: 573 AKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
KNV L + T S G +QLF QPHP R
Sbjct: 559 EKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 589
|
Mus musculus (taxid: 10090) |
| >sp|Q10122|YSM1_CAEEL Uncharacterized WD repeat-containing protein F52C9.1 OS=Caenorhabditis elegans GN=F52C9.1 PE=4 SV=2 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Query: 373 WWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRL 432
W + N++YL +LN + GR G+ H + PWV DFS +EN G R L+++K+RL
Sbjct: 239 WANRKWENYQYLTYLNDITGRVRGEVHNHPIFPWVCDFS---EEN--GGFRQLNRTKYRL 293
Query: 433 AKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTM 492
KGD+QL YS E HHV E LS++ Y+AR P L VR + P EYPSTM
Sbjct: 294 CKGDDQLREMYSR-EPSHHVP-ELLSDIGYMVYRARVEPKDNLCRHVRRKWVPEEYPSTM 351
Query: 493 QRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSR 552
R+YQWTPDECIPEFY DP IF S HP M DL P + SP+EFI+ HR LE + VS
Sbjct: 352 SRMYQWTPDECIPEFYDDPSIFNSCHPDMADLRFPEFVSSPQEFIEWHRKMLEHEEVSMN 411
Query: 553 IHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP--KSVGRLQLFTQPHPVR 602
+H WID+ FG+ ++ + +A N+ L E + ++ G +QLF +PHP+R
Sbjct: 412 LHRWIDLVFGFNLAIDNSKNALNLHLCFVEKNRRGLRTTGMVQLFNRPHPIR 463
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q6ZS81|WDFY4_HUMAN WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens GN=WDFY4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 134/287 (46%), Gaps = 52/287 (18%)
Query: 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS--RDLSK 427
+W + ++SNFEYL++LN AGR DY + V PWV+ T N + RDLSK
Sbjct: 2539 LQKWQKRDISNFEYLMYLNTAAGRTCNDYMQYPVFPWVLADYTSETLNLANPKIFRDLSK 2598
Query: 428 --------SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTA- 478
K + + ++++ T + H S + V SY R P + A
Sbjct: 2599 PMGAQTKERKLKFIQRFKEVEKTEGDMTVQCHYYTHYSSAIIVASYLVRMPPFTQAFCAL 2658
Query: 479 --------------VRSVYEPNEYPSTMQRLYQWTPDEC-IPEFY--CDPQIFYSQHPG- 520
V+S +E + M + + TP+ +PEF C+ F G
Sbjct: 2659 QGGSFDVADRMFHSVKSTWE-SASRENMSDVRELTPEFFYLPEFLTNCNGVEFGCMQDGT 2717
Query: 521 -MTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVML 578
+ D+ +PPWA G P +FI LHR ALESD VS+ +HHWID+ FGYK G AA+DA N+
Sbjct: 2718 VLGDVQLPPWADGDPRKFISLHRKALESDFVSANLHHWIDLIFGYKQQGPAAVDAVNIFH 2777
Query: 579 PS--------SEPTKP----------KSVGRL--QLFTQPHPVRQTA 605
P S T P + G++ QLFT+PHP R A
Sbjct: 2778 PYFYGDRMDLSSITDPLIKSTILGFVSNFGQVPKQLFTKPHPARTAA 2824
|
Homo sapiens (taxid: 9606) |
| >sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus GN=Wdfy3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 161/361 (44%), Gaps = 94/361 (26%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKW 430
RW RGE+SNF+YL+ LN LAGR + D + V PW++ ++DS DL+ K
Sbjct: 2678 QRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILS-------DYDSEEVDLTNPKT 2730
Query: 431 --RLAK-----GDEQL--------DFTYSSSEIP-HHVSDECLSELAVCSYKARRLPLS- 473
LAK DE+L D+ + E P +H S + V SY R P +
Sbjct: 2731 FRNLAKPMGAQTDERLAQYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLVRMEPFTQ 2790
Query: 474 -VLRT-------AVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQH------- 518
LR A R + E + + E IPEF+ P+ ++ +
Sbjct: 2791 IFLRLQGGHFDLADRMFHSVREAWYSASKHNMADVKELIPEFFYLPEFLFNSNNFDLGCK 2850
Query: 519 ---PGMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAK 574
+ D+ +PPWA G P EFI++HR+ALE D VS+ +H WID+ FGYK G AA++A
Sbjct: 2851 QNGTKLGDVILPPWAKGDPREFIRVHREALECDYVSAHLHEWIDLIFGYKQQGPAAVEAV 2910
Query: 575 NV-----------MLPSSEPTKPKSV-------GRL--QLFTQPHPVRQTATWEKGSRKC 614
NV + ++P K + G++ QLF +PHP ++
Sbjct: 2911 NVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKR----------- 2959
Query: 615 KFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPTKE 674
VRS+ N DN+ +P A ++ +++H ++ ++P KE
Sbjct: 2960 --VRSRLNG--DNIGISVPPGATSDKI----------------FFHHLDNLRPSLTPVKE 2999
Query: 675 F 675
Sbjct: 3000 L 3000
|
Mus musculus (taxid: 10090) |
| >sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens GN=WDFY3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 139/296 (46%), Gaps = 63/296 (21%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKW 430
RW RGE+SNF+YL+ LN LAGR + D + V PW++ ++DS DL+ K
Sbjct: 2696 QRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWIL-------ADYDSEEVDLTNPKT 2748
Query: 431 --RLAK-----GDEQL--------DFTYSSSEIP-HHVSDECLSELAVCSYKARRLPLS- 473
LAK DE+L D+ + E P +H S + V SY R P +
Sbjct: 2749 FRNLAKPMGAQTDERLAQYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLVRMEPFTQ 2808
Query: 474 -VLRT-------AVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQH------- 518
LR A R + E + + E IPEF+ P+ ++ +
Sbjct: 2809 IFLRLQGGHFDLADRMFHSVREAWYSASKHNMADVKELIPEFFYLPEFLFNSNNFDLGCK 2868
Query: 519 ---PGMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAK 574
+ D+ +PPWA G P EFI++HR+ALE D VS+ +H WID+ FGYK G AA++A
Sbjct: 2869 QNGTKLGDVILPPWAKGDPREFIRVHREALECDYVSAHLHEWIDLIFGYKQQGPAAVEAV 2928
Query: 575 NV-----------MLPSSEPTKPKSV-------GRL--QLFTQPHPVRQTATWEKG 610
NV + ++P K + G++ QLF +PHP ++ + G
Sbjct: 2929 NVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKRVRSRLNG 2984
|
Homo sapiens (taxid: 9606) |
| >sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3 | Back alignment and function description |
|---|
Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 153/314 (48%), Gaps = 50/314 (15%)
Query: 340 PMIGCCIEGCSSQGLYADLKLSQSMDWHSQF-NRWWRGELSNFEYLLFLNKLAGRRWGDY 398
P +G I+ Q A + + + +S +W R E+SNFEYL+FLN +AGR + D
Sbjct: 2886 PRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDL 2945
Query: 399 TFHMVMPWVI-DFSTKP-DENFDSGSRDLSK-----SKWRLAKGDEQLDFTYSSSEIPHH 451
+ + PWV+ ++ +K D + S RDLSK + R A +E+ + S + P H
Sbjct: 2946 NQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFH 3005
Query: 452 VSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTM--------QRLYQWTPD-- 501
+ ++ R P + + A++ +YP + + + T D
Sbjct: 3006 YGTHYSTAAFTLNWLVRVEPFTTMFLALQG--GKFDYPDRLFSSVSLSWKNCQRDTSDVK 3063
Query: 502 ECIPEFYCDPQIFYS--------QHPG--MTDLAVPPWAGSPEEFIKLHRDALESDRVSS 551
E IPE+Y P++FY+ + G + D+ +PPWA SPEEF++++R ALES+ VS
Sbjct: 3064 ELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKSPEEFVRINRMALESEFVSC 3123
Query: 552 RIHHWIDITFGYKMSGQAAIDAKNV------------------MLPSSEPTKPKSVGRL- 592
++H WID+ FGYK G AI A NV ++ + + ++ G+
Sbjct: 3124 QLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVENQIRNFGQTP 3183
Query: 593 -QLFTQPHPVRQTA 605
QL +PHP R +A
Sbjct: 3184 SQLLMEPHPPRSSA 3197
|
Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways. Drosophila melanogaster (taxid: 7227) |
| >sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 118 bits (295), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 131/279 (46%), Gaps = 45/279 (16%)
Query: 372 RWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF--STKPDENFDSGSRDLSK-- 427
RW R E+SNFEYL+FLN +AGR + D + V PWV+ S + D RDLSK
Sbjct: 2278 RWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPI 2337
Query: 428 ---SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSV--LRTAVRSV 482
+ R E+ + P H + + + S+ R P + L
Sbjct: 2338 GALNPKRAVFYAERYETWEEDQSPPFHYNTHYSTATSALSWLVRIEPFTTFFLNANDGKF 2397
Query: 483 YEPNEYPSTMQRLYQWTP------DECIPEFYCDPQIFYSQ---HPGM-------TDLAV 526
P+ S++ R ++ + E IPEFY P++F + H G+ D+ +
Sbjct: 2398 DHPDRTFSSIARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYHLGVREDEVVVNDVDL 2457
Query: 527 PPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNV---------- 576
PPWA PE+F++++R ALES+ VS ++H WID+ FGYK G A+ A NV
Sbjct: 2458 PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSV 2517
Query: 577 --------MLPSSEPTKPKSVGRL--QLFTQPHPVRQTA 605
+L + + ++ G+ QL +PHP R +A
Sbjct: 2518 NLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSA 2556
|
Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. May have a role in membrane trafficking. Mus musculus (taxid: 10090) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1678 | ||||||
| 297736745 | 1609 | unnamed protein product [Vitis vinifera] | 0.948 | 0.988 | 0.694 | 0.0 | |
| 356574433 | 1659 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.989 | 0.659 | 0.0 | |
| 449441654 | 1652 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.987 | 0.649 | 0.0 | |
| 356535948 | 1660 | PREDICTED: uncharacterized protein LOC10 | 0.975 | 0.986 | 0.659 | 0.0 | |
| 297736790 | 1520 | unnamed protein product [Vitis vinifera] | 0.842 | 0.930 | 0.722 | 0.0 | |
| 449522694 | 1476 | PREDICTED: uncharacterized protein LOC10 | 0.873 | 0.992 | 0.680 | 0.0 | |
| 240256309 | 1639 | protein serine/threonine kinase [Arabido | 0.960 | 0.982 | 0.610 | 0.0 | |
| 357128121 | 1633 | PREDICTED: uncharacterized protein LOC10 | 0.954 | 0.981 | 0.528 | 0.0 | |
| 53791494 | 1619 | BWF1-like protein [Oryza sativa Japonica | 0.933 | 0.967 | 0.511 | 0.0 | |
| 53791495 | 1467 | BWF1-like protein [Oryza sativa Japonica | 0.853 | 0.976 | 0.539 | 0.0 |
| >gi|297736745|emb|CBI25946.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2360 bits (6116), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1159/1670 (69%), Positives = 1342/1670 (80%), Gaps = 79/1670 (4%)
Query: 22 CFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLE 81
CFECL RR +SDFS++LIFSYG+S+S LPF S AVVQM N + E +++FILV +
Sbjct: 6 CFECLQRRFQSDFSNKLIFSYGVSDSGLPFGSGAVVQMANPNGEAA-SAEFILVCMPTHA 64
Query: 82 NDCLTKYVDEYVVDNNGGSDSQVEENDIVGSI------------SEQATSTDSLRDESRC 129
NDCL KYVDEY ++N GS + + IV I +++ S+DSL + S
Sbjct: 65 NDCLAKYVDEYFMENPEGSYKEGIGDIIVSEINQHQAEVGVPNLTDETASSDSLLNRSES 124
Query: 130 LANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGC 189
L NG + + + CNHS RFSCSR+++AL P+A IGICS IFEELAS+F SG
Sbjct: 125 LLNGDRKIILAGLRSRSSKCNHSSRFSCSRMISALAPVARIGICSDFIFEELASDFSSGS 184
Query: 190 LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249
+ED VL SL+LLIEGKA+G++S NFL L+G+PSF+E PGCL HPN+AP+LG+LKTS
Sbjct: 185 VEDHVLCSLSLLIEGKATGRDSINFLNLVGIPSFNEDIFPGCLMHPNIAPILGMLKTSDY 244
Query: 250 ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
+ V+PK PYTLENIL +SPNAL SEWH++FL+YQLLSA+AY+H LG+ H ++CPSNV+L
Sbjct: 245 VNLVLPKAPYTLENILHYSPNALNSEWHMKFLIYQLLSALAYIHGLGVTHGNICPSNVML 304
Query: 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQ 369
TDSCWSWL IC C SQ LYADLKLS S+DWH
Sbjct: 305 TDSCWSWLRIC----------------------------CPSQDLYADLKLSPSIDWHLN 336
Query: 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSK 429
F+RWWRG+LSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS KPDEN D G RDLSKSK
Sbjct: 337 FDRWWRGDLSNFEYLLILNRLAGRRWGDHTFHTVMPWVIDFSIKPDENVDEGWRDLSKSK 396
Query: 430 WRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYP 489
WRLAKGDEQLDFTYS+SEIPHHVS+ECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYP
Sbjct: 397 WRLAKGDEQLDFTYSTSEIPHHVSEECLSELAVCSYKARRLPLSVLRLAVRSVYEPNEYP 456
Query: 490 STMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRV 549
S MQRLYQWTPDECIPEFYCDPQIF S H GM DLAVP WA SPEEFIK+HRDALESDRV
Sbjct: 457 SNMQRLYQWTPDECIPEFYCDPQIFRSLHSGMADLAVPSWARSPEEFIKVHRDALESDRV 516
Query: 550 SSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEK 609
S +IHHWIDITFGYKMSGQAA+ AKNVMLPS+EP P
Sbjct: 517 SCQIHHWIDITFGYKMSGQAALAAKNVMLPSTEPMMP----------------------- 553
Query: 610 GSRKCKFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYI 669
+E+ LLP+ YLQ+LEEA AFS+HA HLSP Y H ++ +
Sbjct: 554 -------------SELVGEKPLLPQTVYLQDLEEAAAFSEHAWHLSPLYCYHPKNLADDV 600
Query: 670 SPTKEFSSESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKS 728
S +E SES IS E G+++ V S+IDL YLL+++EV+DEGS+ YQELLLWRQKS
Sbjct: 601 SSVEEPPSESSKKGISKTPELGNKNGVPSEIDLNYLLDYIEVDDEGSVGYQELLLWRQKS 660
Query: 729 SYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILV 788
SK S+D +KDIFS+GC+LAELHLRRPLFDS SLA+YLENG LPG+++ELP HT+ LV
Sbjct: 661 YCSKALSEDVAKDIFSVGCILAELHLRRPLFDSTSLAMYLENGILPGLIQELPPHTKALV 720
Query: 789 EACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALK 848
EACI KDW RRPSAKSL ESPYF +TV+SSYLFVAPLQL+A+ GS L+YAANFAK GALK
Sbjct: 721 EACILKDWRRRPSAKSLFESPYFLTTVRSSYLFVAPLQLLAKDGSHLRYAANFAKQGALK 780
Query: 849 AMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQT 908
AM +F AE CAPYCLPLV PLSD EAE AY+LLKEF+KCL KAV++++LPAIQKILQ
Sbjct: 781 AMRAFGAEMCAPYCLPLVVAPLSDTEAEWAYILLKEFLKCLKSKAVKSLVLPAIQKILQA 840
Query: 909 TGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSS 968
+ YSHLKVSLLQDSFVRE+WNR+GKQ YLEMVHPLVISNL+ APHKSSASAASVLLIG S
Sbjct: 841 S-YSHLKVSLLQDSFVREVWNRVGKQTYLEMVHPLVISNLFVAPHKSSASAASVLLIGFS 899
Query: 969 EELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSI 1028
EELGVPITVHQT+LPLI CFG+G+C DGIDV+VRIGGL GE FI R +LPLLK+V R I
Sbjct: 900 EELGVPITVHQTVLPLIHCFGKGLCTDGIDVLVRIGGLFGENFIARHILPLLKNVVRYCI 959
Query: 1029 DVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLE 1088
DVS+ NKPEP+QSWSAL+LIDCLM +GLV LP+E VVKEL ED+S +HVMVLM NLE
Sbjct: 960 DVSSMNKPEPMQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQANLE 1019
Query: 1089 ITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKP 1148
I VLQVAA+ L+A+CQRIGPDLTA HVLP LKELFDELAFSQE ++ SGSLG +LK K
Sbjct: 1020 IPVLQVAANYLIALCQRIGPDLTAFHVLPKLKELFDELAFSQETANGSGSLGRALKFSKS 1079
Query: 1149 KVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESS 1208
KVD ++Q+ SRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQ+LLR HNWKWE+TGESS
Sbjct: 1080 KVDEDAQMGSRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQYLLRCHNWKWEHTGESS 1139
Query: 1209 RISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKS 1268
R ENISA RP+ +KGS S+ NPAKLLLNGVGWSIPQSQG R +KNLI Q+R Y H+
Sbjct: 1140 RTGAENISANRPIFSKGSVSEYNPAKLLLNGVGWSIPQSQGIRGAKNLIAQKRFYSLHQD 1199
Query: 1269 SVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHG 1328
V+R A+S++ K EPWFWFP+PAASWDGPDFLGRVGGLKDE PWKI+AS++ S RAHHG
Sbjct: 1200 PVQRHAASSSIGKREPWFWFPSPAASWDGPDFLGRVGGLKDELPWKIRASVIHSARAHHG 1259
Query: 1329 ALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI 1388
ALRS+AV QDECTVFTAG+GPGFKGT+Q+WELT I+CVSGYYGHEEVVNDIC+LSSSGR+
Sbjct: 1260 ALRSLAVCQDECTVFTAGVGPGFKGTIQRWELTGIDCVSGYYGHEEVVNDICILSSSGRV 1319
Query: 1389 ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILS 1448
ASCDGT+H+WNSQTGKL+ VF+E S DSLH SP SS SKIN DQ MLN N+L+SGIL+
Sbjct: 1320 ASCDGTIHIWNSQTGKLIKVFSEPSADSLHLASPLSSASKINNDQANMLNPNSLTSGILT 1379
Query: 1449 TAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508
+AFDG+LYTC+H +E VE+LVVG GNGSLRFID+ QGQKLHLWR E + GFPS VSA+C
Sbjct: 1380 SAFDGSLYTCMHLLESVEKLVVGTGNGSLRFIDVVQGQKLHLWRSESIDSGFPSFVSAVC 1439
Query: 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLL 1568
+CGS++MQ GA A PSWIAAG SSG CRL DVRSGN+IASWRAHDGY+TKLAA EDHLL
Sbjct: 1440 SCGSDRMQVDGASALPSWIAAGFSSGSCRLLDVRSGNLIASWRAHDGYITKLAAREDHLL 1499
Query: 1569 VSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSAD 1628
VSSSLD+TLRIWDLRR W ++P +F+GHT+G+SGFSVWGQD+ISIS NKIGLSSLS+SAD
Sbjct: 1500 VSSSLDRTLRIWDLRRGWSAEPIIFRGHTDGVSGFSVWGQDIISISKNKIGLSSLSRSAD 1559
Query: 1629 EDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678
E+GQH + PQKLYM D G ++LSVLSSISILPFSRLFLVGTEDGYLR+CC
Sbjct: 1560 EEGQHWVTPQKLYMPDRGTRHLSVLSSISILPFSRLFLVGTEDGYLRICC 1609
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574433|ref|XP_003555352.1| PREDICTED: uncharacterized protein LOC100810047 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2222 bits (5758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1100/1668 (65%), Positives = 1326/1668 (79%), Gaps = 27/1668 (1%)
Query: 22 CFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLE 81
CFECL RIKSDFS+Q+ F+Y IS S PF SSA+V ++ ++ +QFIL Y + +
Sbjct: 8 CFECLQLRIKSDFSEQVFFNYAISTSAFPFGSSAIVNISGTADGESSGAQFILQYMPTRD 67
Query: 82 NDCLTKYVDEYVVDN----NGGSDSQVEENDIVGSISEQATSTDSLRDESRCLANGGGEK 137
+C YV+EY++D+ SD + ++ +++ + TS+D +
Sbjct: 68 KNCFINYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSD--------------DS 113
Query: 138 SKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGS 197
+ G+ C+HSGRFSC R +T+L PIA +G+ SYS F+E++++FL +ED VL S
Sbjct: 114 ESGKAFSGSTSCSHSGRFSCLRTITSLAPIARVGMSSYSTFQEVSTDFLCELIEDHVLES 173
Query: 198 LNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKT 257
L+L IEGKASG++S NFL LIG+PSF+E PG LRHPN+APVL + KTS + V+PKT
Sbjct: 174 LDLFIEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIFKTSDHVNVVLPKT 233
Query: 258 PYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317
PY LE+IL F+PNALKS W++ FLMYQLLSA++Y+H LG++H ++CPSN++LTDS WSWL
Sbjct: 234 PYNLESILHFNPNALKSNWNIIFLMYQLLSALSYIHGLGLSHGNICPSNIMLTDSLWSWL 293
Query: 318 YICDKPLVGFN-SIADWCTIPTSPM-IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWR 375
+ ++P++ N ++ + + P IGCC C S LYADLKLS ++DW S F++WWR
Sbjct: 294 RLWNEPVLESNLTLQESERDNSKPARIGCCNVACRSYDLYADLKLSPTIDWQSCFHKWWR 353
Query: 376 GELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKG 435
GELSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS+KPD++ D+G RDLSKSKWRLAKG
Sbjct: 354 GELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDSCDAGWRDLSKSKWRLAKG 413
Query: 436 DEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRL 495
DEQLDFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPSTMQRL
Sbjct: 414 DEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRL 473
Query: 496 YQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHH 555
YQWTPDECIPEFYC QIF S H GM DLAVP WA SPE+FIKLHRDALES+RVS ++HH
Sbjct: 474 YQWTPDECIPEFYCHAQIFKSIHDGMADLAVPSWAESPEDFIKLHRDALESNRVSFQLHH 533
Query: 556 WIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEK--GSRK 613
WIDITFGYKMSGQAAI AKNVMLP SEP P+S GR QLFTQPHP+R T K GS K
Sbjct: 534 WIDITFGYKMSGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIRHATTRTKRHGSNK 593
Query: 614 CKFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-YNHQESFGMYISPT 672
V Q N E+ +SLL E AYLQELE+A FS+ ARHL+ Y Y ++ G IS
Sbjct: 594 YAKVWIQAN-EMHQETSLLSETAYLQELEQASTFSEQARHLNAYYHYPLNQTTGKNISSL 652
Query: 673 KEFSSESFVGTISN-PFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYS 731
+ ++E+F +IS + + V ++L L+H++ EDE S+ Y +LLLW+QK S S
Sbjct: 653 GDPTTETFSESISKLSLIDRNYQVPYRMNLISFLQHMKEEDESSLGYPDLLLWKQKLSSS 712
Query: 732 KTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEAC 791
+ S+D ++DIFSIGCLLAELHL RPLFD ISLA+YLE+G LPG +++LP R+LVEAC
Sbjct: 713 RLCSEDVARDIFSIGCLLAELHLCRPLFDPISLAIYLEDGTLPGFLQDLPPDIRLLVEAC 772
Query: 792 ITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMG 851
I KDWTRRPSAK LLESPYFP TVKSSYLF+APLQL+A+ +RL YAAN AK GAL+ MG
Sbjct: 773 IQKDWTRRPSAKILLESPYFPKTVKSSYLFLAPLQLVAKDETRLHYAANLAKHGALREMG 832
Query: 852 SFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGY 911
+FA E C YCLPL+ +SD EAE AY+LLKEF+KCL+ +A++T+ILP IQKILQTTGY
Sbjct: 833 AFATEMCTTYCLPLIVNAVSDTEAEWAYMLLKEFMKCLTVQAMKTLILPTIQKILQTTGY 892
Query: 912 SHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEEL 971
LKVSLLQDSFVREIWNR+GKQAYLE +HPLV+SNLY +P KSSA++ASVLLI SSEEL
Sbjct: 893 LRLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYNSPDKSSAASASVLLISSSEEL 952
Query: 972 GVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVS 1031
GVPIT+HQTILPL+ CFG+G+C DGIDV+VRIGG+ GE FI++QM+PLLK+V RS IDVS
Sbjct: 953 GVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIIKQMVPLLKNVVRSFIDVS 1012
Query: 1032 NTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITV 1091
NK +PVQSWSAL+LIDC+MTLDGLV FL EV+VKEL+ED C+H+ VLM ++EI V
Sbjct: 1013 CMNKADPVQSWSALALIDCMMTLDGLVYFLTEEVIVKELLEDLCCIHIGVLMQKHMEIAV 1072
Query: 1092 LQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVD 1151
LQVAASTL ICQRIG DLTALH+LP LKELFDELAFSQE S S ++G +LKV K K+
Sbjct: 1073 LQVAASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIG 1132
Query: 1152 GESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRIS 1211
G+ IESRMDLVL+LYPSFASLLGIEKLRQCCATWL+LEQ LLR+HNWKWEY GESS+ S
Sbjct: 1133 GDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQHLLRHHNWKWEYAGESSKNS 1192
Query: 1212 EENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVE 1271
EN A+RP++ +G TS+ NPAKLLLNGVGWSIPQSQG RS+KNLIPQRR + H+S V
Sbjct: 1193 SENFLARRPVIAQGFTSEYNPAKLLLNGVGWSIPQSQG-RSAKNLIPQRRPFKVHQSPVA 1251
Query: 1272 RQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALR 1331
E S M EPWFWFP+PA WDGP+FLGRVG KDE PWKI+AS++ SIRAHHGA+R
Sbjct: 1252 VHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDELPWKIRASVIYSIRAHHGAVR 1311
Query: 1332 SVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC 1391
S+AV QDECTVFTAGIG G+KGTVQKWEL+R NC+SGY+GHEEVVNDI +LSSSGR+ASC
Sbjct: 1312 SLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDIYILSSSGRVASC 1371
Query: 1392 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAF 1451
DGT+H+WNSQTGK + VFAE +S H S SS SKIN+DQ +LN NTLS+GILS+AF
Sbjct: 1372 DGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSASKINSDQANVLNMNTLSNGILSSAF 1431
Query: 1452 DGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1511
D +LYTC+H + E LVVG GNGSLRFID+ +GQKLH+WRGE T FPSL+SAIC+ G
Sbjct: 1432 DSSLYTCMHLLNSTETLVVGTGNGSLRFIDVARGQKLHIWRGESTVSSFPSLISAICSTG 1491
Query: 1512 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSS 1571
S+KMQAGG PS+IAAGLSSG C+LFD +SGNVI+SWRAHDGYVTKLAAPE+HLLVSS
Sbjct: 1492 SDKMQAGGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEEHLLVSS 1551
Query: 1572 SLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADE-D 1630
SLD+TLR+WDLR N P QP +F+GH++GIS FSVWGQDVISIS N+IGL SLSKSA+E D
Sbjct: 1552 SLDRTLRVWDLRMNLPLQPIIFRGHSDGISSFSVWGQDVISISRNRIGLLSLSKSANETD 1611
Query: 1631 GQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678
GQH + PQ+LY+ DNG ++LS LSSISILPFSRLFL+GTEDGYLR+CC
Sbjct: 1612 GQHHISPQRLYISDNGQRSLSALSSISILPFSRLFLIGTEDGYLRICC 1659
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441654|ref|XP_004138597.1| PREDICTED: uncharacterized protein LOC101204693 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2214 bits (5738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1092/1681 (64%), Positives = 1332/1681 (79%), Gaps = 50/1681 (2%)
Query: 16 QQQLHFCFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILV 75
++Q FC+ECL RIK DFSD+LI SY + +S PF S+AVVQ N + SQF++V
Sbjct: 2 EEQTRFCYECLKSRIKFDFSDRLIVSYAVCDSAFPFTSTAVVQATNGETS---GSQFMIV 58
Query: 76 YCRSLENDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATST---------DSLRDE 126
Y + +++C+T YV+EY++DN V S+SE++ T DS+R
Sbjct: 59 YLPAHDHNCITNYVNEYLLDN-------------VNSLSEESFHTMSPVSADQEDSIRAG 105
Query: 127 SRCLANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFL 186
S L+ G + + + Y NHS R SCSRI+++L P+A + + S SIFEE+ASN L
Sbjct: 106 SLHLSQIGEKSATESPNY-----NHSSRLSCSRIISSLAPVARVCVSSPSIFEEVASNLL 160
Query: 187 SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246
SG LED VL SL LLIEG+ASG++S NFL L+G+P F E+ CLRHPNV PVL +L+T
Sbjct: 161 SGSLEDHVLHSLCLLIEGRASGRDSVNFLSLLGIPFFQENVFQNCLRHPNVVPVLSMLRT 220
Query: 247 SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306
SG +++P TPYTLENIL +SP+ALKSEWH+RFL+YQLLSA+A++H LGI H +CPSN
Sbjct: 221 SGYTNAILPSTPYTLENILHYSPDALKSEWHIRFLLYQLLSALAFIHGLGIFHGKICPSN 280
Query: 307 VLLTDSCWSWLYICDKP--LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM 364
V+L D CWSWL+ICD P + N + C++ TS I C + CSS+ LYAD KLS S+
Sbjct: 281 VMLNDMCWSWLHICDMPGLVCDLNRKENNCSMTTSEQINCYAKDCSSKALYADFKLSSSI 340
Query: 365 DWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRD 424
DW S F RWWRGELSNFEYLL LN+LAGRRW D+ FH +MPWVIDFSTKPDE+ D G RD
Sbjct: 341 DWPSDFFRWWRGELSNFEYLLALNRLAGRRWDDHKFHTIMPWVIDFSTKPDESSDVGWRD 400
Query: 425 LSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYE 484
LSKSKWRLAKGDEQLDFTY +SEIPHHVSDECLSELAVCSYKARRLPLS+LR AVRSVYE
Sbjct: 401 LSKSKWRLAKGDEQLDFTYIASEIPHHVSDECLSELAVCSYKARRLPLSILRMAVRSVYE 460
Query: 485 PNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDAL 544
PNEYPS MQRLYQWTPDECIPEFYCD QIFYS H GM DLAVPPWAGSPEEFIKLHRDAL
Sbjct: 461 PNEYPSNMQRLYQWTPDECIPEFYCDSQIFYSMHDGMADLAVPPWAGSPEEFIKLHRDAL 520
Query: 545 ESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQT 604
ESDRVS+++H WIDI FGYKMSG+AAIDAKNVMLP SEPT P+S+GR QLF++PHP RQ
Sbjct: 521 ESDRVSAKLHEWIDIAFGYKMSGEAAIDAKNVMLPLSEPTVPRSMGRRQLFSRPHPKRQV 580
Query: 605 ATWEKGSRKCK-----FVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY- 658
T R C+ V + +E+++ +S++ E YL+ELE A +F + RHLS Y
Sbjct: 581 LT----KRSCQSPVISVVNRGHASEMEDKNSIMSEIMYLEELEVASSFLEEGRHLSALYG 636
Query: 659 YNHQESFGMYISPTKEFSS-ESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSM 716
Y ++ M +KE SS +SF +SN + ++H ++I L YLLEH+EVE + S+
Sbjct: 637 YFAKKPEDM---SSKELSSAKSFNRCLSNSSDIFAQHEQRTNITLNYLLEHVEVESKDSI 693
Query: 717 EYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGV 776
YQELL W++K + FS + DIFSIGC+LAELHL++PLF S SLA+YLE+G LPG
Sbjct: 694 GYQELLSWKEKM-FHLQFSDGVASDIFSIGCILAELHLKKPLFHSTSLAMYLESGILPGF 752
Query: 777 MEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQ 836
++ELP +ILVEACI KD TRRPSAK++LESPYFP+T+KS YLF+APLQL+A+ +RL+
Sbjct: 753 IQELPPDIKILVEACIQKDLTRRPSAKNILESPYFPATIKSCYLFLAPLQLLAKDATRLR 812
Query: 837 YAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRT 896
Y ANFAK GALKAMG FAAE CAPYC+PL+ TP +D E E AYVLLKEF+KCL PKAV+T
Sbjct: 813 YVANFAKQGALKAMGDFAAEMCAPYCMPLILTPQTDDEVEWAYVLLKEFLKCLMPKAVKT 872
Query: 897 MILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSS 956
++LP IQKILQ TGYSHLKVSLLQDSFVREIWNR+GKQ Y+E +HPLVISNL APHKSS
Sbjct: 873 LVLPGIQKILQVTGYSHLKVSLLQDSFVREIWNRVGKQVYMETIHPLVISNLSVAPHKSS 932
Query: 957 ASAASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQM 1016
A+AASVLLIGS EELG+P+T++QTILPLI CFG+GIC DG+D +VRIGGL G+TFI++QM
Sbjct: 933 AAAASVLLIGSCEELGMPVTINQTILPLINCFGKGICADGMDALVRIGGLFGDTFIIKQM 992
Query: 1017 LPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSC 1076
LPLLK+V R I S+ +KPEP+QSWS+L+LIDC TLDGLVA+LP EVV+ ELIE + C
Sbjct: 993 LPLLKNVVRCCIKFSSVSKPEPMQSWSSLALIDCFTTLDGLVAYLPGEVVLNELIEGQKC 1052
Query: 1077 LHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDES 1136
LHVMVL+ NL+++VLQVAAS+LM ICQ IG D+TALH++P L+E+FDELAFSQE + S
Sbjct: 1053 LHVMVLIQKNLDVSVLQVAASSLMTICQLIGSDMTALHLIPQLREVFDELAFSQEAAYRS 1112
Query: 1137 GSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRY 1196
S+G ++K KP +DG+ E RMDLVL+LYP+FAS+LGIEKLRQCC TWLLLEQ+LLRY
Sbjct: 1113 TSIGRNMKSSKPSIDGDVLNERRMDLVLILYPTFASILGIEKLRQCCTTWLLLEQYLLRY 1172
Query: 1197 HNWKWEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNL 1256
HNWKWE TG SSR S E + +KR +K STS+ +PAKLLLNGVGWSIPQSQ ++ +KNL
Sbjct: 1173 HNWKWECTGMSSRCSSEKLISKRNEFSKSSTSEYSPAKLLLNGVGWSIPQSQRAQGAKNL 1232
Query: 1257 IPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK 1316
+P R +D H S++ +TS+ +K EPWFWFP+ A+ WDGPDFLGR GLK+E PWKIK
Sbjct: 1233 MPLR--HDVHGGSMQMHASTSHSIKAEPWFWFPSIASCWDGPDFLGRAVGLKEEHPWKIK 1290
Query: 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVV 1376
AS++ S+RAH GA+RS+A+ DE VFTAGIG GFKG VQ+WEL+ +NCVSGYYGHEEVV
Sbjct: 1291 ASVIYSVRAHQGAVRSLAICPDEFNVFTAGIGSGFKGMVQRWELSTVNCVSGYYGHEEVV 1350
Query: 1377 NDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1436
NDICVLS +GRIASCDGT+HVWNS++GKL+SVFAE S+DS H SP SS+ K N D V +
Sbjct: 1351 NDICVLSPTGRIASCDGTIHVWNSRSGKLISVFAESSVDSAHLASPLSSVLKPNMDHVNL 1410
Query: 1437 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496
++SN+LSSGIL++AFDG+LYT +HH+E E+LVVG GNGSLRFID+ QGQKLHLWRG+
Sbjct: 1411 ISSNSLSSGILTSAFDGSLYTYMHHLEFAEKLVVGTGNGSLRFIDVAQGQKLHLWRGDGV 1470
Query: 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556
E GFPSLVSAI +CG +KM A GA A P+WIAAGLSSG CRLFDVRSGNVIA+WRAHDGY
Sbjct: 1471 ESGFPSLVSAIGSCGFDKMVADGASAMPTWIAAGLSSGYCRLFDVRSGNVIATWRAHDGY 1530
Query: 1557 VTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNN 1616
VTKLAAPE+H+LVSSSLD+TLRIWDLRR PS+P +F+GH +G+S FS+WGQDVISIS N
Sbjct: 1531 VTKLAAPEEHMLVSSSLDRTLRIWDLRRLSPSKPIIFRGHNDGVSSFSMWGQDVISISRN 1590
Query: 1617 KIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1676
KIGLSSL+KSADEDGQ+R++PQ L D G +NLSVLSSISIL +SRLF+VGTEDGY+++
Sbjct: 1591 KIGLSSLTKSADEDGQYRVIPQNLASNDQGTRNLSVLSSISILRYSRLFIVGTEDGYMKI 1650
Query: 1677 C 1677
C
Sbjct: 1651 C 1651
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535948|ref|XP_003536503.1| PREDICTED: uncharacterized protein LOC100809116 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2211 bits (5730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1097/1664 (65%), Positives = 1330/1664 (79%), Gaps = 27/1664 (1%)
Query: 26 LHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLENDCL 85
L RIKSDFS+Q+ F+Y IS S PF SSA+V ++ ++ +QFIL Y S + +C
Sbjct: 13 LQLRIKSDFSEQVFFNYAISTSAFPFGSSAIVNISGTADGEASGAQFILQYMPSRDKNCF 72
Query: 86 TKYVDEYVVDN----NGGSDSQVEENDIVGSISEQATSTDSLRDESRCLANGGGEKSKDR 141
YV+EY++D+ SD + ++ +++ + TS+D D + +
Sbjct: 73 INYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSDD-SDSGKAFS---------- 121
Query: 142 IEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLL 201
G+ C+HS RFSC R +T+L P+A +GI SYS F+E++++FLSG +ED VL SL+L
Sbjct: 122 ---GSTSCSHSERFSCLRTITSLAPVARVGISSYSTFQEVSTDFLSGLIEDHVLESLDLF 178
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
IEGKASG++S NFL LIG+PSF+E PG LRHPN+APVL + KTS + V+PK PY L
Sbjct: 179 IEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIFKTSDHVNVVLPKNPYNL 238
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
E+IL F+P+ALKS W+ FLMYQLLSA++Y+H LG++H ++CPSN++LTDS WSWL + +
Sbjct: 239 ESILHFNPDALKSNWNRIFLMYQLLSALSYIHGLGVSHGNICPSNIMLTDSLWSWLRLWN 298
Query: 322 KPLVGFN-SIADWCTIPTSPM-IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379
+P++ N ++ + + + P IGCC GC S GLYADL+LS ++DW S F++WWRGELS
Sbjct: 299 EPVLESNLTLQESERVNSEPARIGCCNVGCRSYGLYADLRLSPTIDWQSCFHKWWRGELS 358
Query: 380 NFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQL 439
NFEYLL LN+LAGRRWGD+TFH VMPWVIDFS+KPD+N D+G RDLSKSKWRLAKGDEQL
Sbjct: 359 NFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDTGWRDLSKSKWRLAKGDEQL 418
Query: 440 DFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWT 499
DFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPSTMQRLYQWT
Sbjct: 419 DFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRVAVRSVYEPNEYPSTMQRLYQWT 478
Query: 500 PDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDI 559
PDECIPEFYCD QIF S H GM DLAVP WA S E+FIKLHRDALES+RVS ++HHWIDI
Sbjct: 479 PDECIPEFYCDAQIFKSIHDGMADLAVPSWAESHEDFIKLHRDALESNRVSFQLHHWIDI 538
Query: 560 TFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQ--TATWEKGSRKCKFV 617
TFGYK+SGQAAI AKNVMLP SEP P+S GR QLFTQPHP+R T+T GS K V
Sbjct: 539 TFGYKISGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIRHATTSTKRHGSNKYAKV 598
Query: 618 RSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-YNHQESFGMYISPTKEFS 676
SQ N +SLL E AYLQELE+A FS+HARHL+ Y Y ++ G IS + + +
Sbjct: 599 WSQAN-ATHRETSLLSETAYLQELEQASTFSEHARHLNAFYHYPLNQTRGKNISSSGDPT 657
Query: 677 SESFVGTISN-PFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFS 735
+E+F +IS + + V ++L L+H++ ED+GS Y +LLLW+QK S S+ S
Sbjct: 658 TETFSESISKLSLIDRNYQVPYKMNLISFLQHMKEEDKGSSGYPDLLLWKQKLSSSRLCS 717
Query: 736 KDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKD 795
+D ++DIFS+GCLLAELHL RPLFD ISLA+YLE+G LPG +++LP R+LVEACI KD
Sbjct: 718 EDIARDIFSVGCLLAELHLCRPLFDPISLAIYLEDGTLPGYLQDLPPDIRLLVEACIQKD 777
Query: 796 WTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGSFAA 855
W RRPSAK LLESPYFP+TVKSSYLF+APLQL+A+ +RL+YAAN AK GAL+ MG+FA
Sbjct: 778 WMRRPSAKILLESPYFPNTVKSSYLFLAPLQLVAKDETRLRYAANLAKHGALREMGTFAT 837
Query: 856 ERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYSHLK 915
E C YCLPL+ T +SD EAE AY+LLKEF+KCL+ +AV+T+ILP IQKILQTT Y LK
Sbjct: 838 EMCTTYCLPLIVTAVSDTEAEWAYMLLKEFMKCLTVQAVKTLILPTIQKILQTTSYLRLK 897
Query: 916 VSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELGVPI 975
VSLLQDSFVREIWNR+GKQAYLE +HPLV+SNLY +P KSSA++ASVLLI SSEELGVPI
Sbjct: 898 VSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKSSAASASVLLISSSEELGVPI 957
Query: 976 TVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNK 1035
T+HQTILPL+ CFG+G+C DGIDV+VRIGG+ GE FIV+QM+PLLK+V RS IDVS NK
Sbjct: 958 TIHQTILPLVHCFGKGLCSDGIDVLVRIGGIFGELFIVKQMVPLLKNVVRSFIDVSCMNK 1017
Query: 1036 PEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVLQVA 1095
P+PVQSWSAL+LIDC++TLDGLVAFL EV+VKEL+ED SC+H+ VLM ++EI VLQVA
Sbjct: 1018 PDPVQSWSALALIDCMLTLDGLVAFLTEEVIVKELLEDLSCIHIGVLMQKHMEIAVLQVA 1077
Query: 1096 ASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDGESQ 1155
ASTL ICQRIG DLTALH+LP LKELFDELAFSQE S S ++G +LKV K K+ G+
Sbjct: 1078 ASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIGGDLH 1137
Query: 1156 IESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISEENI 1215
IESRMDLVL+LYPSFASLLGIEKLRQCCATWL+LEQ+LLR+HNWKWEY GESS+ E +
Sbjct: 1138 IESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQYLLRHHNWKWEYAGESSKNGSEIV 1197
Query: 1216 SAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEA 1275
A+RP++ G TS+ NPAKLLLNGVGWSIPQSQG RS+KNLIPQR+ + H+S V E
Sbjct: 1198 LARRPVIAHGFTSEYNPAKLLLNGVGWSIPQSQG-RSAKNLIPQRQPFKVHQSPVAVHEE 1256
Query: 1276 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAV 1335
S M EPWFWFP+PA WDGP+FLGRVG KD+ PWKI+A+++ SIRAHHGA+RS+AV
Sbjct: 1257 MSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRATVIYSIRAHHGAVRSLAV 1316
Query: 1336 GQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTL 1395
QDECTVFTAGIG G+KGTVQKWEL+R NC+SGY+GHEEVVNDIC+LSSSGR+ASCDGT+
Sbjct: 1317 NQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDICILSSSGRVASCDGTI 1376
Query: 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455
H+WNSQTGK + VFAE +S H S SS SKIN+DQ +LN NTLSSGILS+AFD +L
Sbjct: 1377 HIWNSQTGKQILVFAESQTESGHPTSHPSSSSKINSDQANVLNLNTLSSGILSSAFDSSL 1436
Query: 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515
YTC+H + E LVVG GNGSLRF D+ +GQKLH+WRGE TE FPSL+SAIC+ GS+KM
Sbjct: 1437 YTCMHLLNSAETLVVGTGNGSLRFFDVARGQKLHIWRGESTESSFPSLISAICSTGSDKM 1496
Query: 1516 QAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDK 1575
QAGG PS+IAAGLSSG C+LFD +SGNVI+SWRAHDGYVTKLAAPE+HLLVSSSLD+
Sbjct: 1497 QAGGISTFPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEEHLLVSSSLDR 1556
Query: 1576 TLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADE-DGQHR 1634
TLR+WDLR N SQP +F+GH++GIS FS+WGQDVISIS N+IGL SLSKS +E DGQH
Sbjct: 1557 TLRVWDLRMNLSSQPIIFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSPNETDGQHH 1616
Query: 1635 LVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678
+ PQKLY+ DNG ++LS LSSISILPFSRLFL+GTEDGYLR+CC
Sbjct: 1617 ISPQKLYVSDNGQRSLSALSSISILPFSRLFLIGTEDGYLRICC 1660
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736790|emb|CBI25991.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2207 bits (5720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1069/1480 (72%), Positives = 1223/1480 (82%), Gaps = 66/1480 (4%)
Query: 200 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 259
LLIEGKA+G++S NFL L+G+PSF+E PGCLRHPN+AP+LG+LKTS + V+PK PY
Sbjct: 106 LLIEGKATGRDSINFLNLVGIPSFNEDIFPGCLRHPNIAPILGMLKTSDYVNLVLPKAPY 165
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319
TLENIL +SPNAL SEWH++FL+YQLLSA+AY+H LG+ H ++CPSNV+LTDSCWSWL I
Sbjct: 166 TLENILHYSPNALNSEWHMKFLIYQLLSALAYIHGLGVTHGNICPSNVMLTDSCWSWLRI 225
Query: 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379
C C SQ LYADLKLS S+DWH F+RWWRG+LS
Sbjct: 226 C----------------------------CPSQDLYADLKLSPSIDWHLNFDRWWRGDLS 257
Query: 380 NFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQL 439
NFEYLL LN+LAGRRWGD+TFH VMPWVIDFS KPDEN D G RDLSKSKWRLAKGDEQL
Sbjct: 258 NFEYLLILNRLAGRRWGDHTFHTVMPWVIDFSIKPDENVDEGWRDLSKSKWRLAKGDEQL 317
Query: 440 DFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWT 499
DFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPS MQRLYQWT
Sbjct: 318 DFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRLAVRSVYEPNEYPSNMQRLYQWT 377
Query: 500 PDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDI 559
PDECIPEFYCDPQIF+S H GM DLAVP WA SPEEFIK+HRDALESD+VS +IHHWIDI
Sbjct: 378 PDECIPEFYCDPQIFHSLHSGMADLAVPSWARSPEEFIKVHRDALESDQVSCQIHHWIDI 437
Query: 560 TFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCKFVRS 619
TFGYKMSGQAA+ A NVMLPS+EP P
Sbjct: 438 TFGYKMSGQAALAAMNVMLPSTEPMMP--------------------------------- 464
Query: 620 QNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPTKEFSSES 679
+E+ LLP+ YLQ+LEEA AFS+HA HLSP Y H ++ +S +E SES
Sbjct: 465 ---SELVGEKPLLPQTVYLQDLEEAAAFSEHAWHLSPLYCYHPKNLADDVSSVEEPPSES 521
Query: 680 FVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDC 738
IS E G+++ V S+IDL YLL+++EV+DEGS+ YQELLLWRQKS S+ S+D
Sbjct: 522 SKKGISKTPELGNKNGVPSEIDLNYLLDYIEVDDEGSVGYQELLLWRQKSYCSRALSEDV 581
Query: 739 SKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKDWTR 798
+KDIFS+GC+LAELHLRRPLFDS SLA+YLENG LPG+++ELP HT+ LVEACI KDW R
Sbjct: 582 AKDIFSVGCILAELHLRRPLFDSTSLAMYLENGILPGLIQELPPHTKALVEACILKDWRR 641
Query: 799 RPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGSFAAERC 858
RPSAKSLLESPYF +TV+SSYLFVAPLQL+A+ GSRL+YAANFAK GALKAMG+F AE C
Sbjct: 642 RPSAKSLLESPYFLTTVRSSYLFVAPLQLLAKDGSRLRYAANFAKQGALKAMGAFGAEMC 701
Query: 859 APYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYSHLKVSL 918
APYCLPLV PLSD EAE AY+LLKEF+KCL KAV++++LPAIQKILQ + YSHLKVSL
Sbjct: 702 APYCLPLVVAPLSDTEAEWAYILLKEFLKCLKSKAVKSLVLPAIQKILQAS-YSHLKVSL 760
Query: 919 LQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELGVPITVH 978
LQDSFVRE+WNR+GKQ YLEMVHPLVISNL+ APHKSSASAASVLLIGSSEELGVPITVH
Sbjct: 761 LQDSFVREVWNRVGKQTYLEMVHPLVISNLFVAPHKSSASAASVLLIGSSEELGVPITVH 820
Query: 979 QTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEP 1038
QTILPLI CFG+G+C DGIDV+VRIGGL GE FI R +LPLLK+V R IDVS+ NKPEP
Sbjct: 821 QTILPLIHCFGKGLCTDGIDVLVRIGGLFGENFIARHILPLLKNVVRYCIDVSSMNKPEP 880
Query: 1039 VQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVLQVAAST 1098
+QSWSAL+LIDCLM +GLV LP+E VVKEL ED+S +HVMVLM NLEI VLQVAA+
Sbjct: 881 MQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQANLEIPVLQVAANY 940
Query: 1099 LMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDGESQIES 1158
L+A+CQRIGPDLTA HVLP LKELFDELAFSQE ++ SGSLG +LK K KVD E+ + S
Sbjct: 941 LIALCQRIGPDLTAFHVLPKLKELFDELAFSQETANGSGSLGRALKFAKSKVDEEAHMGS 1000
Query: 1159 RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISEENISAK 1218
RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQ+LLR HNWKWE+TGESSR ENISA
Sbjct: 1001 RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQYLLRCHNWKWEHTGESSRTGAENISAN 1060
Query: 1219 RPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSN 1278
RP+ +KGS S+ NPAKLLLNGVGWSIPQSQG R +KNLI Q+R Y H+ V+R A+S+
Sbjct: 1061 RPIFSKGSVSEYNPAKLLLNGVGWSIPQSQGIRGAKNLIAQKRFYSLHQDPVQRHAASSS 1120
Query: 1279 LMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQD 1338
+ K EPWFWFP+PAASWDGPDFLGRVGGLKDE PWKI+AS++ S RAHHGALRS+AV QD
Sbjct: 1121 IGKREPWFWFPSPAASWDGPDFLGRVGGLKDELPWKIRASVIHSARAHHGALRSLAVCQD 1180
Query: 1339 ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVW 1398
ECTVFTAG+GPGFKGT+Q+WELT I+CVSGYYGHEEVVNDIC+LSSSGR+ASCDGT+H+W
Sbjct: 1181 ECTVFTAGVGPGFKGTIQRWELTGIDCVSGYYGHEEVVNDICILSSSGRVASCDGTIHIW 1240
Query: 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1458
NSQTGKL+ VF+E S DSLH SP SS SKIN DQ MLN N+L+SGIL++AFDG+LYTC
Sbjct: 1241 NSQTGKLIKVFSEPSADSLHLASPLSSASKINNDQANMLNPNSLTSGILTSAFDGSLYTC 1300
Query: 1459 LHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAG 1518
+H +E VE+LVVG GNGSLRFID+ QGQKLHLWR E + GFPS VSA+C+CGS++MQ
Sbjct: 1301 MHLLESVEKLVVGTGNGSLRFIDVVQGQKLHLWRSESIDSGFPSFVSAVCSCGSDRMQVD 1360
Query: 1519 GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLR 1578
GA A PSWIAAG SSG CRL D RSGN+IASWRAHDGY+TKLAA EDHLLVSSSLD+TLR
Sbjct: 1361 GASALPSWIAAGFSSGSCRLLDARSGNLIASWRAHDGYITKLAAREDHLLVSSSLDRTLR 1420
Query: 1579 IWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQ 1638
IWDLRR W ++P +F+GHT+G+SGFSVWGQD+ISIS NKIGLSSLS+SADE+GQH + PQ
Sbjct: 1421 IWDLRRGWSAEPIIFRGHTDGVSGFSVWGQDIISISKNKIGLSSLSRSADEEGQHWVTPQ 1480
Query: 1639 KLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678
KLYM D G ++LSVLSSISILPFSRLFLVGTEDGYLR+CC
Sbjct: 1481 KLYMPDRGTRHLSVLSSISILPFSRLFLVGTEDGYLRICC 1520
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449522694|ref|XP_004168361.1| PREDICTED: uncharacterized protein LOC101225335, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2081 bits (5391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1010/1485 (68%), Positives = 1216/1485 (81%), Gaps = 20/1485 (1%)
Query: 203 EGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLE 262
EG+ASG++S NFL L+G+P F E+ CLRHPNV PVL +L+TSG +++P TPYTLE
Sbjct: 1 EGRASGRDSVNFLSLLGIPFFQENVFQNCLRHPNVVPVLSMLRTSGYTNAILPSTPYTLE 60
Query: 263 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322
NIL +SP+ALKSEWH+RFL+YQLLSA+A++H LGI H +CPSNV+L D CWSWL+ICD
Sbjct: 61 NILHYSPDALKSEWHIRFLLYQLLSALAFIHGLGIFHGKICPSNVMLNDMCWSWLHICDM 120
Query: 323 P--LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSN 380
P + N + C++ TS I C + CSS+ LYAD KLS S+DW S F RWWRGELSN
Sbjct: 121 PGLVCDLNRKENNCSMTTSEQINCYAKDCSSKALYADFKLSSSIDWPSDFFRWWRGELSN 180
Query: 381 FEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLD 440
FEYLL LN+LAGRRW D+ FH +MPWVIDFSTKPDE+ D G RDLSKSKWRLAKGDEQLD
Sbjct: 181 FEYLLALNRLAGRRWDDHKFHTIMPWVIDFSTKPDESSDVGWRDLSKSKWRLAKGDEQLD 240
Query: 441 FTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTP 500
FTY +SEIPHHVSDECLSELAVCSYKARRLPLS+LR AVRSVYEPNEYPS MQRLYQWTP
Sbjct: 241 FTYIASEIPHHVSDECLSELAVCSYKARRLPLSILRMAVRSVYEPNEYPSNMQRLYQWTP 300
Query: 501 DECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDIT 560
DECIPEFYCD QIFYS H GM DLAVPPWAGSPEEFIKLHRDALESDRVS+++H WIDI
Sbjct: 301 DECIPEFYCDSQIFYSMHDGMADLAVPPWAGSPEEFIKLHRDALESDRVSAKLHEWIDIA 360
Query: 561 FGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCK----- 615
FGYKMSG+AAIDAKNVMLP SEPT P+S+GR QLF++PHP RQ T R C+
Sbjct: 361 FGYKMSGEAAIDAKNVMLPLSEPTVPRSMGRRQLFSRPHPKRQVLT----KRSCQSPVIS 416
Query: 616 FVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-YNHQESFGMYISPTKE 674
V + +E+++ +S++ E YL+ELE A +F + RHLS Y Y ++ M +KE
Sbjct: 417 VVNRGHASEMEDKNSIMSEIMYLEELEVASSFLEEGRHLSALYGYFAKKPEDM---SSKE 473
Query: 675 FSS-ESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSK 732
SS +SF +SN + ++H ++I L YLLEH+EVE + S+ YQELL W++K +
Sbjct: 474 LSSAKSFNRCLSNSSDIFAQHEQRTNITLNYLLEHVEVESKDSIGYQELLSWKEKM-FHL 532
Query: 733 TFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACI 792
FS + DIFSIGC+LAELHL++PLF S SLA+YLE+G LPG ++ELP +ILVEACI
Sbjct: 533 QFSDGVASDIFSIGCILAELHLKKPLFHSTSLAMYLESGILPGFIQELPPDIKILVEACI 592
Query: 793 TKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGS 852
KD TRRPSAK++LESPYFP+T+KS YLF+APLQL+A+ +RL+Y ANFAK GALKAMG
Sbjct: 593 QKDLTRRPSAKNILESPYFPATIKSCYLFLAPLQLLAKDATRLRYVANFAKQGALKAMGD 652
Query: 853 FAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYS 912
FAAE CAPYC+PL+ TP +D E E AYVLLKEF+KCL PKAV+T++LP IQKILQ TGYS
Sbjct: 653 FAAEMCAPYCMPLILTPQTDDEVEWAYVLLKEFLKCLMPKAVKTLVLPGIQKILQVTGYS 712
Query: 913 HLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELG 972
HLKVSLLQDSFVREIWNR+GKQ Y+E +HPLVISNL APHKSSA+AASVLLIGS EELG
Sbjct: 713 HLKVSLLQDSFVREIWNRVGKQVYMETIHPLVISNLSVAPHKSSAAAASVLLIGSCEELG 772
Query: 973 VPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSN 1032
+P+T++QTILPLI CFG+GIC DG+D +VRIGGL G+TFI++QMLPLLK+V R I S+
Sbjct: 773 MPVTINQTILPLINCFGKGICADGMDALVRIGGLFGDTFIIKQMLPLLKNVVRCCIKFSS 832
Query: 1033 TNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVL 1092
+KPEP+QSWS L+LIDC TLDGLVA+LP EVV+KELIE + CLHVMVL+ NL+++VL
Sbjct: 833 VSKPEPMQSWSCLALIDCFTTLDGLVAYLPGEVVLKELIEGQKCLHVMVLIQKNLDVSVL 892
Query: 1093 QVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDG 1152
QVAAS+LM ICQ IG D+TALH++P L+E+FDELAFSQE + S S+G ++K KP +DG
Sbjct: 893 QVAASSLMTICQLIGSDMTALHLIPQLREVFDELAFSQEAAYRSTSIGRNMKSSKPSIDG 952
Query: 1153 ESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISE 1212
+ E RMDLVL+LYP+FAS+LGIEKLRQCC TWLLLEQ+LLRYHNWKWE TG SSR S
Sbjct: 953 DVLNEGRMDLVLILYPTFASILGIEKLRQCCTTWLLLEQYLLRYHNWKWECTGMSSRCSS 1012
Query: 1213 ENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVER 1272
E + +KR +KGSTS+ +PAKLLLNGVGWSIPQSQ ++ +KNL+P R +D H+ S++
Sbjct: 1013 EKLISKRNEFSKGSTSEYSPAKLLLNGVGWSIPQSQRAQGAKNLMPLR--HDVHRGSMQM 1070
Query: 1273 QEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRS 1332
+TS+ +K EPWFWFP+ A+ WDGPDFLGR GLK+E PWKIKAS++ S+RAH GA+RS
Sbjct: 1071 HASTSHSIKAEPWFWFPSIASCWDGPDFLGRAVGLKEEHPWKIKASVIYSVRAHQGAVRS 1130
Query: 1333 VAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCD 1392
+A+ DE VFTAGIG GFKG VQ+WEL+ +NCVSGYYGHEEVVNDICVLS +GRIASCD
Sbjct: 1131 LAICPDEFNVFTAGIGSGFKGMVQRWELSTVNCVSGYYGHEEVVNDICVLSPTGRIASCD 1190
Query: 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFD 1452
GT+HVWNS++GKL+SVFAE S+DS H SP SS+ K N D V +++SN+LSSGIL++AFD
Sbjct: 1191 GTIHVWNSRSGKLISVFAESSVDSAHLASPLSSVLKTNMDHVNLISSNSLSSGILTSAFD 1250
Query: 1453 GNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512
G+LYT +HHIE E+LVVG GNGSLRFID+ QGQKLHLWRG+ E GFPSLVSAI +CG
Sbjct: 1251 GSLYTYMHHIEFAEKLVVGTGNGSLRFIDVAQGQKLHLWRGDGVESGFPSLVSAIGSCGF 1310
Query: 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSS 1572
+KM A GA A P+WIAAGLSSG CRLFDVRSGNVIA+WRAHDGYVTKLAAPE+H+LVSSS
Sbjct: 1311 DKMVADGASAMPTWIAAGLSSGYCRLFDVRSGNVIATWRAHDGYVTKLAAPEEHMLVSSS 1370
Query: 1573 LDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQ 1632
LD+TLRIWDLRR PS+P +F+GH +G+S FS+WGQDVISIS NKIGLSSL+KSADEDGQ
Sbjct: 1371 LDRTLRIWDLRRLSPSKPIIFRGHNDGVSSFSMWGQDVISISRNKIGLSSLTKSADEDGQ 1430
Query: 1633 HRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677
+R++PQ L D G +NLSVLSSISIL +SRLF+VGTEDGY+++C
Sbjct: 1431 YRVIPQNLASNDQGTRNLSVLSSISILRYSRLFIVGTEDGYMKIC 1475
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|240256309|ref|NP_974804.4| protein serine/threonine kinase [Arabidopsis thaliana] gi|332005192|gb|AED92575.1| protein serine/threonine kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1977 bits (5122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1025/1679 (61%), Positives = 1247/1679 (74%), Gaps = 68/1679 (4%)
Query: 21 FCFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSE--------NLLASQF 72
CF+CL +RI SDFSDQ++FSYG+S+SPLPF SSAVV++++SS E +SQF
Sbjct: 8 LCFDCLDQRINSDFSDQIVFSYGVSDSPLPFGSSAVVKVSDSSEEFSASCSSCESTSSQF 67
Query: 73 ILVYCRSLENDCLTKYVDEYVV-DNNGGSDSQVEENDIVGSISEQATSTDSLRDESRCLA 131
IL Y R E+ CL KYVD++VV D G S+ VE ++ + + + +T+
Sbjct: 68 ILEYLRKDEHGCLAKYVDKFVVKDREGNSNDAVESDECLDCSTSGSQATE---------- 117
Query: 132 NGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLE 191
+ + I G+ C HSG FSC R + AL PIA I CS S ++LAS+F C E
Sbjct: 118 ----DDDTENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCSASELQKLASSFHYECPE 173
Query: 192 DCVLGSLNLLIEGKASGQESKNFLRLIGVPSF-DESSVPGCLRHPNVAPVLGLLKTSGLI 250
D +L SL+ LI+GK+SGQ + +FL L+ +E S CLRHPN++PVLGLL +S +
Sbjct: 174 DQILASLHRLIDGKSSGQATHSFLCLLLGLPLLEEKSKLRCLRHPNLSPVLGLLTSSDCL 233
Query: 251 TSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
SV+PK PYTLENIL +SP+A+KSEWH F++YQLLSA+A+LH L ++H + PSN+LL+
Sbjct: 234 VSVLPKAPYTLENILYYSPSAIKSEWHRNFIIYQLLSALAHLHGLKVSHGDIRPSNILLS 293
Query: 311 DSCWSWLYICDKPLVG---FNSIAD---WCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM 364
DS WSWL I KP +G NS A WC +EGC S GLYADLK+S +
Sbjct: 294 DSLWSWLTIYSKPDLGSVDANSSASRRRWC-----------VEGCYSYGLYADLKISSHL 342
Query: 365 DWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRD 424
DW + F++WW+GELSNFEYLL LNKLAGRRWGD+TFH VMPWVIDFS KP+ + DSG RD
Sbjct: 343 DWQTHFDKWWKGELSNFEYLLVLNKLAGRRWGDHTFHPVMPWVIDFSKKPENDSDSGWRD 402
Query: 425 LSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYE 484
L KSKWRLAKGDEQLDFTYS+ E PHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYE
Sbjct: 403 LRKSKWRLAKGDEQLDFTYSTFEFPHHVSDECLSELAVCSYKARRLPLSVLRKAVRSVYE 462
Query: 485 PNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDAL 544
PNEYPS MQRLY WTPDECIPEFYCDP+IF S HP M+DLAVPPWA SP+EFI+LHRDAL
Sbjct: 463 PNEYPSDMQRLYDWTPDECIPEFYCDPRIFCSLHPSMSDLAVPPWASSPDEFIRLHRDAL 522
Query: 545 ESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQT 604
ES VSS IHHWIDITFGYKMSG AAI AKNVML SSEPT P+SVGR QLF +PHPVR
Sbjct: 523 ESPHVSSLIHHWIDITFGYKMSGHAAITAKNVMLSSSEPTVPRSVGRRQLFFRPHPVRLG 582
Query: 605 ATWEK-GSRKCKFVRSQNNNEVDNVSSLLPEA-AYLQELEEAFAFSDHARHLSPRYYNHQ 662
+ EK SR + + + VDN S++ A YL+E EEA AFSDHA HL P+Y+ +
Sbjct: 583 FSREKEQSRNELEMHTFHGFGVDNKRSVILLADEYLEETEEASAFSDHATHLCPKYHLRE 642
Query: 663 ESFGMYISPTK-EFSSESFVGTISNPFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQEL 721
+ SP +S + S P + ++ + S I L YLLEH+EV DE S E QEL
Sbjct: 643 ---NLVESPLHVSYSENTKKVNTSLPGTSKNKGLSSRISLNYLLEHMEVRDEASTELQEL 699
Query: 722 LLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELP 781
L WRQ + SKD + DIFSIGC+LAEL+L +PLF+S+SLA YLE GDLP +++ELP
Sbjct: 700 LQWRQDFC-TGNISKDIAGDIFSIGCVLAELYLMKPLFNSVSLATYLEGGDLPELIKELP 758
Query: 782 SHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANF 841
T+++VEACI +DW RRPSAKSLL+SPYF +TV+S++LF APLQL+A+ +RL YAA+F
Sbjct: 759 PPTQVIVEACIEQDWRRRPSAKSLLDSPYFSATVRSAHLFAAPLQLLAKGQTRLCYAASF 818
Query: 842 AKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPA 901
AK G LK MG+F AE CA YCLPLV TPLS+ E E AYVLLKEF K L+P AV+ ++LP+
Sbjct: 819 AKQGVLKVMGTFVAEMCAVYCLPLVTTPLSEDECELAYVLLKEFTKSLTPMAVQRLVLPS 878
Query: 902 IQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAAS 961
IQKIL TTGYSHLKVSLLQDSFVRE+WN+IGK+ YLEM+HPLVISNLY +P K SASAAS
Sbjct: 879 IQKILLTTGYSHLKVSLLQDSFVRELWNQIGKRVYLEMIHPLVISNLYNSPDKISASAAS 938
Query: 962 VLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLK 1021
VLLIGSSEELG P+TVHQTILPLI FG+GIC DGIDV+VRIG LLG FIV+QMLPLL+
Sbjct: 939 VLLIGSSEELGAPVTVHQTILPLISYFGKGICTDGIDVLVRIGRLLGVNFIVKQMLPLLE 998
Query: 1022 HVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMV 1081
HV ID+S+ KPEPV SW +L+L DCL+TLDGLVA + E+++ EL + R CLHV V
Sbjct: 999 HVVCFCIDLSSMKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHELTKGRLCLHVRV 1058
Query: 1082 LMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGG 1141
LM NLE+ VLQ AA++LM+ICQRIG ++TALHVLP LKELFDE AFS++ +D S SL
Sbjct: 1059 LMQKNLELRVLQFAATSLMSICQRIGQEMTALHVLPQLKELFDEFAFSEKSTDASDSLSW 1118
Query: 1142 SLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKW 1201
++ + K ES I+SRMDLVLLLYPSFASLLG+EKLRQ C TWLLLEQ+LL++HNWKW
Sbjct: 1119 KIRTAEQKFHPESPIKSRMDLVLLLYPSFASLLGMEKLRQGCPTWLLLEQYLLKHHNWKW 1178
Query: 1202 EYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRR 1261
EYTG SSR + E RP+L +G S+ P K+LLNG G S+PQSQG R+S +L
Sbjct: 1179 EYTGRSSRYNME----ARPVLKQGPASKHTP-KVLLNGSGRSVPQSQGLRNSNHLKLHIH 1233
Query: 1262 VYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILS 1321
V VE QEA N + EPW WFP+P WDG D +GR G KDE+ WKI+AS+LS
Sbjct: 1234 V------PVEGQEAVLNPLVHEPWSWFPSPVTCWDGLD-IGRFGNPKDENRWKIRASVLS 1286
Query: 1322 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICV 1381
S RAHHGALRS+ V +DECTVFT+GI PGFKG+VQKWEL ++CVS Y+ HEEVVNDI +
Sbjct: 1287 SARAHHGALRSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSYHAHEEVVNDIGI 1346
Query: 1382 LSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNT 1441
LSS+G++ASCDGT+HVWNSQTGKL+S+F+E D S S SK N++ S+
Sbjct: 1347 LSSTGKVASCDGTIHVWNSQTGKLISLFSESPSDQDQASSDPS--SKNNSNPCNRHASHG 1404
Query: 1442 LSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFP 1501
LSSGI FD NLYTC+H++E +++L+VG G G+LRFID+ +GQKL LW GE E GF
Sbjct: 1405 LSSGI----FDENLYTCMHYLEYMDQLIVGTGFGALRFIDLARGQKLELWGGEAIESGFT 1460
Query: 1502 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA 1561
SLVSA+C+ GS+ GA SPSWIAAG SSGQCRLFD+R I+SWRAHDGYVTKL
Sbjct: 1461 SLVSALCSGGSQTKHGDGASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKLV 1520
Query: 1562 APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLS 1621
APE HLLVSSSLDKTLRIWDLR++W QP V KGH +G+SGFS+WG+DVISIS N IG+
Sbjct: 1521 APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVSGFSIWGKDVISISRNNIGIF 1580
Query: 1622 SLSKS--ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678
SL+KS +E Q R++PQKLYM + G + S LS+I +LPFSRLF+VG DG+LR+CC
Sbjct: 1581 SLAKSQDEEEQQQQRIIPQKLYMAEKGGRVKSDLSTICVLPFSRLFIVGAHDGHLRICC 1639
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357128121|ref|XP_003565724.1| PREDICTED: uncharacterized protein LOC100837771 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 1726 bits (4471), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 892/1687 (52%), Positives = 1155/1687 (68%), Gaps = 85/1687 (5%)
Query: 21 FCFECLHRRIKSDFSDQ-LIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRS 79
C ECL RR++SD + L F + IS+SPLPFASSAVVQ+ + +E SQ
Sbjct: 1 MCPECLERRVRSDLAGSGLSFVHVISDSPLPFASSAVVQIASDGAEERNWSQ-------- 52
Query: 80 LENDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATSTDSLRDESRCLANGGGEKSK 139
K D +V NGG + + + TD R E + ++ G E ++
Sbjct: 53 -------KTYDFVLVALNGGKTFVDTKKCEKTPLEQPIIYTDDNRCEVQTDSSSGIEYTE 105
Query: 140 D-RIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSL 198
D + Y + + + +T L P+ + G S S EL +++++ +E+ V+ SL
Sbjct: 106 DFQNSYSS-----NNQLLIVNTVTKLIPVYYSGRISISEIRELIASYMNLKVEENVISSL 160
Query: 199 NLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTP 258
NLL E K SG +FL +G +FD+ GC+RHPN+ PVLG++++S + PK P
Sbjct: 161 NLLCENKISGSAGLDFLNFVGFSAFDDLHPSGCVRHPNILPVLGVVESSDCCYMLHPKAP 220
Query: 259 YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318
YTLENI+ +SP AL S+WH+RFLMYQ++SA+AYLH G+ H ++ PS +L++DS W +L
Sbjct: 221 YTLENIMHYSPKALCSDWHIRFLMYQIISALAYLHDSGVHHGNLKPSTILMSDSLWPYLS 280
Query: 319 ICDKPLV----GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWW 374
I D V GF ++P C E CSS+ ++ L S+DW S F RWW
Sbjct: 281 ISDIYHVRQNWGFERPKG-----STPSSCCVAEDCSSRPIHTSFDLLSSLDWSSHFKRWW 335
Query: 375 RGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAK 434
GELSN+EYLL LNKLAGRRWGD FH VMPWVIDF+ +PDEN D G RDL+KSKWRLAK
Sbjct: 336 AGELSNYEYLLVLNKLAGRRWGDPAFHPVMPWVIDFTVRPDENSDIGWRDLTKSKWRLAK 395
Query: 435 GDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQR 494
GDEQLDFTYSSSE+PHHVSDECLSELAVCSYKARRL ++LR+AVRSVYEPNEYPS+MQR
Sbjct: 396 GDEQLDFTYSSSEVPHHVSDECLSELAVCSYKARRLSKTILRSAVRSVYEPNEYPSSMQR 455
Query: 495 LYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIH 554
LYQWTPDECIP+FY DP+IF S H M+DLA+P W S EEFI LHRDALESDRVS ++H
Sbjct: 456 LYQWTPDECIPDFYSDPRIFVSLHSEMSDLALPSWVTSSEEFICLHRDALESDRVSQQLH 515
Query: 555 HWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT----WEKG 610
HWIDITFGYK+ G+A+++AKNVMLP S+P++PKS+GR QLFT PHP R +T +
Sbjct: 516 HWIDITFGYKLDGEASVEAKNVMLPPSDPSRPKSIGRRQLFTTPHPKRHISTPHPSYHNK 575
Query: 611 SRKCKFVRSQNNNEVDNVSS-------LLPEAAYLQELEEAFAFSDHARHLSPRYYNHQE 663
C +++ +N +V+S +L + YL+E E+A F + HL P+Y N+ +
Sbjct: 576 VESCARCQAKGSNSTTDVASNGFIPPDMLSQVDYLEEFEQATIFMELEHHLDPKY-NYTD 634
Query: 664 SFGMYISPTKEFSSESFVGTISNPFENGSRHVLS---DIDLEYLLEHLEVEDEGSMEYQE 720
+ Y S K S IS+ S VLS D D LE E ++ M YQE
Sbjct: 635 TSSCYCSSVKYPKSH-----ISDQEMLQSDTVLSVVPDFDFGSYLECFECDNSSPMGYQE 689
Query: 721 LLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEEL 780
LL W+QKS + + + DIFSIGC+LAE++LRRPLFD+ LA Y E G LPG + EL
Sbjct: 690 LLPWKQKSC---SVIEHHANDIFSIGCMLAEIYLRRPLFDASLLAAYRETGMLPGALNEL 746
Query: 781 PSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAAN 840
P H +LVE+CI ++W RRPS+K LL+SPYFP +V+++Y+F+APLQL+ G RL+Y A
Sbjct: 747 PVHVGVLVESCIQREWKRRPSSKHLLDSPYFPPSVQAAYMFLAPLQLLCTSGDRLKYVAK 806
Query: 841 FAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILP 900
A G LKAMG F+AE CAPYCLP V++ LSD + E LLKEF+KCLS +A + +IL
Sbjct: 807 LASEGTLKAMGEFSAEMCAPYCLPFVSSSLSDVDTESGLCLLKEFLKCLSVQATKQLILH 866
Query: 901 AIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAA 960
IQKILQ YSHLKVSLLQDSFVRE+W ++GKQ Y+E VHPLVI+NL +P+K ASAA
Sbjct: 867 IIQKILQAPEYSHLKVSLLQDSFVRELWKKLGKQTYIENVHPLVIANLCNSPNKIIASAA 926
Query: 961 SVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLL 1020
S++LIGSSEELG+PIT+HQTILPLI FG+G+C DGI+ +VRIGGLLGE+F V+Q+LPLL
Sbjct: 927 SIVLIGSSEELGIPITIHQTILPLIHYFGKGLCADGIETLVRIGGLLGESFTVKQILPLL 986
Query: 1021 KHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVM 1080
++V S ID S KPEP SW++ +LID L L+GLV+ LP + V+KEL++D+ CLH+
Sbjct: 987 RNVILSCIDSSKVIKPEPQHSWNSFALIDGLSALEGLVSVLPVKAVLKELLQDQVCLHIK 1046
Query: 1081 VLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLG 1140
VLM +L++ V+QVAA+ L+ +C RIGPD TA++VLPHLKELF ELAF E S S
Sbjct: 1047 VLMLIHLDLRVIQVAATALVDLCLRIGPDNTAIYVLPHLKELFAELAFYHESSAVSLPSE 1106
Query: 1141 GSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWK 1200
G LK+ K ++ESR+DL+ LLYP AS +GIEKLR+CC+TW LLEQ L R +NWK
Sbjct: 1107 G-LKISKGNKSEPIKMESRIDLMFLLYPFLASYVGIEKLRECCSTWFLLEQSLQRLYNWK 1165
Query: 1201 ----WEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNL 1256
W T EN+ R S+ P +LL NG G S+ QS+ +++ N+
Sbjct: 1166 PFSEWSKTA-------ENMKDPRSQSGNCIPSEVFPTELLFNGAGLSVSQSEITKTGWNV 1218
Query: 1257 IPQRRVYDYHKSSVERQEATSNLMKC----EPWFWFPTPAASWDGPDFLGRVGGLKDESP 1312
R+ S +E ++ NL +PWFWFP+P +SW PDFLGR GLKDE
Sbjct: 1219 AVSRQ-----GSRLEHGTSSDNLCSSTSGNQPWFWFPSPDSSWGTPDFLGRSSGLKDEFQ 1273
Query: 1313 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH 1372
WKIKAS+L S RAH GALRS+AV DECTVFT G+GPGF G++Q+W+L +NC SGYYGH
Sbjct: 1274 WKIKASVLYSARAHPGALRSLAVHDDECTVFTGGVGPGFTGSIQRWQLPNMNCTSGYYGH 1333
Query: 1373 EEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432
EEVVN IC+LS++G++ASCDGT+HVWN QTGKL++ E S S + + +
Sbjct: 1334 EEVVNSICILSTTGKVASCDGTIHVWNGQTGKLIAAHTESST--------SFPLQTASVE 1385
Query: 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWR 1492
Q MLN + LS GILS AF G+LYT +H++ ++LV G+GNGS+RFIDI+Q +KLHLW+
Sbjct: 1386 QANMLNQDALSGGILSNAFRGSLYTTMHYMSSEDKLVAGMGNGSIRFIDISQDRKLHLWK 1445
Query: 1493 GEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552
+ E+ F SLVSAIC+CGS+K + G V S SWIAAGLSSG CRL D RSG +IA WRA
Sbjct: 1446 SDSAEISFSSLVSAICSCGSDKPRTGRLVDSSSWIAAGLSSGYCRLLDERSGKIIAVWRA 1505
Query: 1553 HDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVIS 1612
HDG++TKLA+PEDHL+VSSSLDKTLRIWDLRR +Q +F+ H++GI FSVWGQD++S
Sbjct: 1506 HDGHITKLASPEDHLIVSSSLDKTLRIWDLRRKLETQSNIFRSHSDGIFDFSVWGQDLVS 1565
Query: 1613 ISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNG--AKNLSVLSSISILPFSRLFLVGTE 1670
+S NKI L+SL + E G +LV Q LY D G +KN+SVLS+IS+LP SRLF+VGTE
Sbjct: 1566 VSRNKISLTSLFRPTSEIGHQQLVLQNLYSTDRGVKSKNMSVLSTISVLPLSRLFVVGTE 1625
Query: 1671 DGYLRLC 1677
DG+L++C
Sbjct: 1626 DGFLKIC 1632
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|53791494|dbj|BAD52616.1| BWF1-like protein [Oryza sativa Japonica Group] gi|222618325|gb|EEE54457.1| hypothetical protein OsJ_01553 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 1651 bits (4276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 868/1696 (51%), Positives = 1121/1696 (66%), Gaps = 129/1696 (7%)
Query: 22 CFECLHRRIKSDFSDQLI-FSYGISNSPLPFASSAVVQMNNSSSENLLASQ-----FILV 75
C ECL RRI S F +G+ SPLPFAS+AVVQ+ + +E SQ F+LV
Sbjct: 12 CPECLERRILSGLPGSCFSFVHGLHESPLPFASAAVVQIASDGAEECNGSQQSTGYFVLV 71
Query: 76 YCRSLENDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATSTDSLRDESRCLANGGG 135
G E DI Q ++SL + S+ G
Sbjct: 72 -----------------------GLQGGKELLDI------QECESNSLENGSQIDLQGKE 102
Query: 136 EKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVL 195
D NH + S +T L P ++ + S EL S++L+ E+ V+
Sbjct: 103 STDADD--------NHRKQ-SIINTITKLTPTRYLARAATSEIRELISSYLNLTTEESVM 153
Query: 196 GSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIP 255
SLNLL E K G +FL G F++ G +RHPN+ PVLG+++T + P
Sbjct: 154 NSLNLLSENKIVGSGGLDFLNFTGFSEFNDIHPSGHVRHPNILPVLGIVETYDCCYMLHP 213
Query: 256 KTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315
K+PYTLENI+ +SP AL S+WH+RFL+YQ++SA+ YLH G+ H ++ PS + ++DS W
Sbjct: 214 KSPYTLENIMHYSPEALWSDWHIRFLIYQIISALVYLHDSGVHHGNLKPSAIFMSDSLWP 273
Query: 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIE-GCSSQGLYADLKLSQSMDWHSQFNRWW 374
+L I D V N P + CC E CSS+ +Y+ LS S+DW S RWW
Sbjct: 274 YLSISDICPVKQNCGFAESKRPA--LTLCCFEEDCSSRAIYSGFNLSSSLDWQSYSKRWW 331
Query: 375 RGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAK 434
GELSN+EY+L LNKLAGRRWGD FH VMPWVIDF+ +PDEN D G RDL+KSKWRLAK
Sbjct: 332 MGELSNYEYILVLNKLAGRRWGDPAFHTVMPWVIDFTVRPDENSDIGWRDLTKSKWRLAK 391
Query: 435 GDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQR 494
GDEQLDFTYSSSE+PHHVSDECLSELAVCSYKARRLP ++LR+AVRSVYEPNEYPS MQR
Sbjct: 392 GDEQLDFTYSSSEVPHHVSDECLSELAVCSYKARRLPKNILRSAVRSVYEPNEYPSNMQR 451
Query: 495 LYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIH 554
LYQWTPDECIPEFY DP+IF S H M++LA+P W S EEFI LHR+ALESDRVS ++H
Sbjct: 452 LYQWTPDECIPEFYSDPRIFVSLHSEMSNLALPSWVTSAEEFICLHRNALESDRVSRQLH 511
Query: 555 HWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT----WEKG 610
HWIDITFGYK+SG+++++AKNVMLP S+P KPKS GR QLFT+PHP R T+T +
Sbjct: 512 HWIDITFGYKLSGESSVEAKNVMLPPSDPAKPKSTGRRQLFTKPHPKRLTSTPHSTYHNK 571
Query: 611 SRKCKFVRSQNNNEVDNV-------SSLLPEAAYLQELEEAFAFSDHARHLSPRY----- 658
C + +++ + ++ + YL+E E+A F HL P Y
Sbjct: 572 MESCAKCQGGSSSMTTGLLLKDHIPPAMSSQIDYLEEFEQANVFMKLENHLCPIYDYAND 631
Query: 659 ---------YNHQESFGMYISPTKEFSSESFVGTISNPFENGSRHVLSDIDLEYLLEHLE 709
YN YI P + S V D D LE E
Sbjct: 632 SSSCCSSVKYNKSPCSNQYIVPPESVLS-----------------VAPDFDFCSFLECFE 674
Query: 710 VEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE 769
+D YQELL W+QKS + + DIFS+GC+LAE++L PLFD+ L+ Y E
Sbjct: 675 SDDSSPTGYQELLRWKQKSCSVNEYHAN---DIFSVGCILAEIYLHGPLFDADLLSAYKE 731
Query: 770 NGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIA 829
G LPG ++ELP H ++VE+CI ++W RRP AK LLES YFP +V+S+Y+F+APLQLI
Sbjct: 732 TGILPGAIQELPIHVAVIVESCIQREWKRRPLAKHLLESQYFPPSVRSAYMFLAPLQLIC 791
Query: 830 RHGSRLQYAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCL 889
RL+Y A A G L+AMG AAE CAPYCLPLV+ LS + E A LLKEF+KCL
Sbjct: 792 TPRDRLKYVAKLASEGTLRAMGECAAEMCAPYCLPLVSPSLSYIDTEFALALLKEFVKCL 851
Query: 890 SPKAVRTMILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLY 949
S +A + +IL IQKILQ YSHLKVSLLQDSFVRE+W ++GKQ Y+E VHPLVI NLY
Sbjct: 852 SVQATKDLILHIIQKILQAPEYSHLKVSLLQDSFVRELWKKLGKQTYIEKVHPLVIMNLY 911
Query: 950 AAPHKSSASAASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGE 1009
+P+K +AS+AS++LIGSSEELG+PIT +QT+LP+IQCFG+G+CPDGID +VRIGGLLGE
Sbjct: 912 NSPNKITASSASIVLIGSSEELGIPITFNQTVLPIIQCFGKGLCPDGIDTLVRIGGLLGE 971
Query: 1010 TFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKE 1069
+F V+Q+LPLL++V S I+ S NKPEP SW++ +L+D L L+GLV+ LP + +++E
Sbjct: 972 SFTVKQILPLLRNVILSCIESSKINKPEPQHSWNSFALMDGLSALEGLVSILPVKTILRE 1031
Query: 1070 LIEDRSCLHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFS 1129
L++D+ CLH+ VL +L + V+QVAAS + +CQ+IGP+ TA +VLPHLKELF ELAFS
Sbjct: 1032 LLQDQVCLHIKVLTQVHLNLRVIQVAASAFVDLCQQIGPENTATYVLPHLKELFAELAFS 1091
Query: 1130 QECSDESGSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLL 1189
E S S G LK +++ESR+DLV LLYP A+L+GIEKLR+C +TW LL
Sbjct: 1092 HESSGLSVPTKG-LKFFDGNKTEPAKMESRIDLVFLLYPFLAALVGIEKLRECYSTWFLL 1150
Query: 1190 EQFLLRYHNWK--WEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLL----NGVGWS 1243
EQ L R + WK +++G S EN+ +R ++S+ P KL+ NG +
Sbjct: 1151 EQALQRLYGWKPSTDHSG-----SSENMKGQRFRSGNYTSSEPAPTKLVAEIGKNGRNMT 1205
Query: 1244 IPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGR 1303
+ +QGSR H SS + A+++ +PWFWFP+P + PDFLGR
Sbjct: 1206 V-SNQGSRLE------------HGSSSDNLCASTS--GNQPWFWFPSPDRNCWAPDFLGR 1250
Query: 1304 VGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI 1363
G+KDE PWKIKAS+L S RAH GALRS+AV DECT+FT G+GPGFKG++QKWEL +
Sbjct: 1251 SAGMKDELPWKIKASVLYSARAHPGALRSLAVHDDECTIFTGGVGPGFKGSIQKWELPNM 1310
Query: 1364 NCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPS 1423
NC SGYYGHEEVVN IC+LS +G++ASCDGT+H+WN+QTGKL++V E S+ P
Sbjct: 1311 NCSSGYYGHEEVVNSICILSITGKVASCDGTIHIWNAQTGKLIAVHTESSI-----SFPQ 1365
Query: 1424 SSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483
+ S +Q MLN + LS GILS AF G+LYT +H++E ++LV G+GNGS+RFIDI+
Sbjct: 1366 QTAS---IEQANMLNQDALSGGILSNAFRGSLYTTMHYMESKDKLVAGMGNGSIRFIDIS 1422
Query: 1484 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS 1543
Q QKLHLW+ + E+ F SLVSAIC+C S+K++ VAS SWIAAGLSSG CRL D RS
Sbjct: 1423 QDQKLHLWKSDSDEISFSSLVSAICSCASDKLKKDSTVASSSWIAAGLSSGYCRLLDERS 1482
Query: 1544 GNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGF 1603
GN++A WRAHDG++TKLAAPEDHL+VSSSLDKTLR+WDLR N +Q +++ H++GI F
Sbjct: 1483 GNIVAVWRAHDGHITKLAAPEDHLIVSSSLDKTLRVWDLRGNLSTQSNIYRSHSDGIINF 1542
Query: 1604 SVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGA--KNLSVLSSISILPF 1661
S WGQD++S+S NKI L+SLS+ E G +L Q LY D G KN+SVLS+IS+LP
Sbjct: 1543 SAWGQDMVSVSRNKIALTSLSRPTSEIGHQQLTFQYLYSSDRGVKYKNMSVLSTISVLPL 1602
Query: 1662 SRLFLVGTEDGYLRLC 1677
SRLF+VGTEDG+L++C
Sbjct: 1603 SRLFVVGTEDGFLKIC 1618
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|53791495|dbj|BAD52617.1| BWF1-like protein [Oryza sativa Japonica Group] gi|215768435|dbj|BAH00664.1| unnamed protein product [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 1610 bits (4170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/1517 (53%), Positives = 1051/1517 (69%), Gaps = 85/1517 (5%)
Query: 195 LGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVI 254
+ SLNLL E K G +FL G F++ G +RHPN+ PVLG+++T +
Sbjct: 1 MNSLNLLSENKIVGSGGLDFLNFTGFSEFNDIHPSGHVRHPNILPVLGIVETYDCCYMLH 60
Query: 255 PKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314
PK+PYTLENI+ +SP AL S+WH+RFL+YQ++SA+ YLH G+ H ++ PS + ++DS W
Sbjct: 61 PKSPYTLENIMHYSPEALWSDWHIRFLIYQIISALVYLHDSGVHHGNLKPSAIFMSDSLW 120
Query: 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE-GCSSQGLYADLKLSQSMDWHSQFNRW 373
+L I D V N P + CC E CSS+ +Y+ LS S+DW S RW
Sbjct: 121 PYLSISDICPVKQNCGFAESKRPA--LTLCCFEEDCSSRAIYSGFNLSSSLDWQSYSKRW 178
Query: 374 WRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLA 433
W GELSN+EY+L LNKLAGRRWGD FH VMPWVIDF+ +PDEN D G RDL+KSKWRLA
Sbjct: 179 WMGELSNYEYILVLNKLAGRRWGDPAFHTVMPWVIDFTVRPDENSDIGWRDLTKSKWRLA 238
Query: 434 KGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQ 493
KGDEQLDFTYSSSE+PHHVSDECLSELAVCSYKARRLP ++LR+AVRSVYEPNEYPS MQ
Sbjct: 239 KGDEQLDFTYSSSEVPHHVSDECLSELAVCSYKARRLPKNILRSAVRSVYEPNEYPSNMQ 298
Query: 494 RLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRI 553
RLYQWTPDECIPEFY DP+IF S H M++LA+P W S EEFI LHR+ALESDRVS ++
Sbjct: 299 RLYQWTPDECIPEFYSDPRIFVSLHSEMSNLALPSWVTSAEEFICLHRNALESDRVSRQL 358
Query: 554 HHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT----WEK 609
HHWIDITFGYK+SG+++++AKNVMLP S+P KPKS GR QLFT+PHP R T+T +
Sbjct: 359 HHWIDITFGYKLSGESSVEAKNVMLPPSDPAKPKSTGRRQLFTKPHPKRLTSTPHSTYHN 418
Query: 610 GSRKCKFVRSQNNNEVDNV-------SSLLPEAAYLQELEEAFAFSDHARHLSPRY---- 658
C + +++ + ++ + YL+E E+A F HL P Y
Sbjct: 419 KMESCAKCQGGSSSMTTGLLLKDHIPPAMSSQIDYLEEFEQANVFMKLENHLCPIYDYAN 478
Query: 659 ----------YNHQESFGMYISPTKEFSSESFVGTISNPFENGSRHVLSDIDLEYLLEHL 708
YN YI P + S V D D LE
Sbjct: 479 DSSSCCSSVKYNKSPCSNQYIVPPESVLS-----------------VAPDFDFCSFLECF 521
Query: 709 EVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL 768
E +D YQELL W+QKS + + DIFS+GC+LAE++L PLFD+ L+ Y
Sbjct: 522 ESDDSSPTGYQELLRWKQKSCSVNEYHAN---DIFSVGCILAEIYLHGPLFDADLLSAYK 578
Query: 769 ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLI 828
E G LPG ++ELP H ++VE+CI ++W RRP AK LLES YFP +V+S+Y+F+APLQLI
Sbjct: 579 ETGILPGAIQELPIHVAVIVESCIQREWKRRPLAKHLLESQYFPPSVRSAYMFLAPLQLI 638
Query: 829 ARHGSRLQYAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKC 888
RL+Y A A G L+AMG AAE CAPYCLPLV+ LS + E A LLKEF+KC
Sbjct: 639 CTPRDRLKYVAKLASEGTLRAMGECAAEMCAPYCLPLVSPSLSYIDTEFALALLKEFVKC 698
Query: 889 LSPKAVRTMILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNL 948
LS +A + +IL IQKILQ YSHLKVSLLQDSFVRE+W ++GKQ Y+E VHPLVI NL
Sbjct: 699 LSVQATKDLILHIIQKILQAPEYSHLKVSLLQDSFVRELWKKLGKQTYIEKVHPLVIMNL 758
Query: 949 YAAPHKSSASAASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLG 1008
Y +P+K +AS+AS++LIGSSEELG+PIT +QT+LP+IQCFG+G+CPDGID +VRIGGLLG
Sbjct: 759 YNSPNKITASSASIVLIGSSEELGIPITFNQTVLPIIQCFGKGLCPDGIDTLVRIGGLLG 818
Query: 1009 ETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVK 1068
E+F V+Q+LPLL++V S I+ S NKPEP SW++ +L+D L L+GLV+ LP + +++
Sbjct: 819 ESFTVKQILPLLRNVILSCIESSKINKPEPQHSWNSFALMDGLSALEGLVSILPVKTILR 878
Query: 1069 ELIEDRSCLHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAF 1128
EL++D+ CLH+ VL +L + V+QVAAS + +CQ+IGP+ TA +VLPHLKELF ELAF
Sbjct: 879 ELLQDQVCLHIKVLTQVHLNLRVIQVAASAFVDLCQQIGPENTATYVLPHLKELFAELAF 938
Query: 1129 SQECSDESGSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLL 1188
S E S S G LK +++ESR+DLV LLYP A+L+GIEKLR+C +TW L
Sbjct: 939 SHESSGLSVPTKG-LKFFDGNKTEPAKMESRIDLVFLLYPFLAALVGIEKLRECYSTWFL 997
Query: 1189 LEQFLLRYHNWK--WEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLL----NGVGW 1242
LEQ L R + WK +++G S EN+ +R ++S+ P KL+ NG
Sbjct: 998 LEQALQRLYGWKPSTDHSG-----SSENMKGQRFRSGNYTSSEPAPTKLVAEIGKNGRNM 1052
Query: 1243 SIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLG 1302
++ +QGSR H SS + A+++ +PWFWFP+P + PDFLG
Sbjct: 1053 TV-SNQGSRLE------------HGSSSDNLCASTS--GNQPWFWFPSPDRNCWAPDFLG 1097
Query: 1303 RVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1362
R G+KDE PWKIKAS+L S RAH GALRS+AV DECT+FT G+GPGFKG++QKWEL
Sbjct: 1098 RSAGMKDELPWKIKASVLYSARAHPGALRSLAVHDDECTIFTGGVGPGFKGSIQKWELPN 1157
Query: 1363 INCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422
+NC SGYYGHEEVVN IC+LS +G++ASCDGT+H+WN+QTGKL++V E S+ P
Sbjct: 1158 MNCSSGYYGHEEVVNSICILSITGKVASCDGTIHIWNAQTGKLIAVHTESSI-----SFP 1212
Query: 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1482
+ S +Q MLN + LS GILS AF G+LYT +H++E ++LV G+GNGS+RFIDI
Sbjct: 1213 QQTAS---IEQANMLNQDALSGGILSNAFRGSLYTTMHYMESKDKLVAGMGNGSIRFIDI 1269
Query: 1483 NQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542
+Q QKLHLW+ + E+ F SLVSAIC+C S+K++ VAS SWIAAGLSSG CRL D R
Sbjct: 1270 SQDQKLHLWKSDSDEISFSSLVSAICSCASDKLKKDSTVASSSWIAAGLSSGYCRLLDER 1329
Query: 1543 SGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1602
SGN++A WRAHDG++TKLAAPEDHL+VSSSLDKTLR+WDLR N +Q +++ H++GI
Sbjct: 1330 SGNIVAVWRAHDGHITKLAAPEDHLIVSSSLDKTLRVWDLRGNLSTQSNIYRSHSDGIIN 1389
Query: 1603 FSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGA--KNLSVLSSISILP 1660
FS WGQD++S+S NKI L+SLS+ E G +L Q LY D G KN+SVLS+IS+LP
Sbjct: 1390 FSAWGQDMVSVSRNKIALTSLSRPTSEIGHQQLTFQYLYSSDRGVKYKNMSVLSTISVLP 1449
Query: 1661 FSRLFLVGTEDGYLRLC 1677
SRLF+VGTEDG+L++C
Sbjct: 1450 LSRLFVVGTEDGFLKIC 1466
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1678 | ||||||
| TAIR|locus:1006230455 | 1639 | AT5G18525 [Arabidopsis thalian | 0.828 | 0.848 | 0.601 | 0.0 | |
| DICTYBASE|DDB_G0268088 | 2179 | lvsG "BEACH domain-containing | 0.120 | 0.093 | 0.444 | 2.2e-97 | |
| UNIPROTKB|Q562E7 | 1941 | WDR81 "WD repeat-containing pr | 0.213 | 0.184 | 0.405 | 5e-84 | |
| UNIPROTKB|E2R4W6 | 1933 | WDR81 "Uncharacterized protein | 0.215 | 0.186 | 0.409 | 1.5e-82 | |
| MGI|MGI:2681828 | 1934 | Wdr81 "WD repeat domain 81" [M | 0.215 | 0.187 | 0.411 | 2.3e-82 | |
| RGD|1311334 | 1933 | Wdr81 "WD repeat domain 81" [R | 0.214 | 0.186 | 0.408 | 1.1e-79 | |
| FB|FBgn0032395 | 1953 | CG6734 [Drosophila melanogaste | 0.136 | 0.117 | 0.486 | 5.2e-64 | |
| UNIPROTKB|E1BRH2 | 3511 | WDFY3 "Uncharacterized protein | 0.058 | 0.028 | 0.379 | 8e-21 | |
| UNIPROTKB|E1BRH3 | 3529 | WDFY3 "Uncharacterized protein | 0.058 | 0.028 | 0.379 | 8.2e-21 | |
| UNIPROTKB|E2RLD7 | 3509 | WDFY3 "Uncharacterized protein | 0.058 | 0.028 | 0.379 | 1.2e-20 |
| TAIR|locus:1006230455 AT5G18525 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4269 (1507.8 bits), Expect = 0., P = 0.
Identities = 864/1436 (60%), Positives = 1064/1436 (74%)
Query: 22 CFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLE 81
CF+CL +RI SDFSDQ++FSYG+S+SPLPF SSAVV++++SS E AS C S E
Sbjct: 9 CFDCLDQRINSDFSDQIVFSYGVSDSPLPFGSSAVVKVSDSSEE-FSAS------CSSCE 61
Query: 82 NDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATSTDSLRDESRCL--ANGGGEKSK 139
+ ++++ EY+ + G ++ + +V + S D++ + CL + G + ++
Sbjct: 62 STS-SQFILEYLRKDEHGCLAKYVDKFVVKD--REGNSNDAVESDE-CLDCSTSGSQATE 117
Query: 140 D----RIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVL 195
D I G+ C HSG FSC R + AL PIA I CS S ++LAS+F C ED +L
Sbjct: 118 DDDTENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCSASELQKLASSFHYECPEDQIL 177
Query: 196 GSLNLLIEGKASGQESKNFL-RLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVI 254
SL+ LI+GK+SGQ + +FL L+G+P +E S CLRHPN++PVLGLL +S + SV+
Sbjct: 178 ASLHRLIDGKSSGQATHSFLCLLLGLPLLEEKSKLRCLRHPNLSPVLGLLTSSDCLVSVL 237
Query: 255 PKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314
PK PYTLENIL +SP+A+KSEWH F++YQLLSA+A+LH L ++H + PSN+LL+DS W
Sbjct: 238 PKAPYTLENILYYSPSAIKSEWHRNFIIYQLLSALAHLHGLKVSHGDIRPSNILLSDSLW 297
Query: 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWW 374
SWL I KP +G S+ D ++ C+EGC S GLYADLK+S +DW + F++WW
Sbjct: 298 SWLTIYSKPDLG--SV-D--ANSSASRRRWCVEGCYSYGLYADLKISSHLDWQTHFDKWW 352
Query: 375 RGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAK 434
+GELSNFEYLL LNKLAGRRWGD+TFH VMPWVIDFS KP+ + DSG RDL KSKWRLAK
Sbjct: 353 KGELSNFEYLLVLNKLAGRRWGDHTFHPVMPWVIDFSKKPENDSDSGWRDLRKSKWRLAK 412
Query: 435 GDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQR 494
GDEQLDFTYS+ E PHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPS MQR
Sbjct: 413 GDEQLDFTYSTFEFPHHVSDECLSELAVCSYKARRLPLSVLRKAVRSVYEPNEYPSDMQR 472
Query: 495 LYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIH 554
LY WTPDECIPEFYCDP+IF S HP M+DLAVPPWA SP+EFI+LHRDALES VSS IH
Sbjct: 473 LYDWTPDECIPEFYCDPRIFCSLHPSMSDLAVPPWASSPDEFIRLHRDALESPHVSSLIH 532
Query: 555 HWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKG-SRK 613
HWIDITFGYKMSG AAI AKNVML SSEPT P+SVGR QLF +PHPVR + EK SR
Sbjct: 533 HWIDITFGYKMSGHAAITAKNVMLSSSEPTVPRSVGRRQLFFRPHPVRLGFSREKEQSRN 592
Query: 614 CKFVRSQNNNEVDNVSSLLPEA-AYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPT 672
+ + + VDN S++ A YL+E EEA AFSDHA HL P+Y+ + + SP
Sbjct: 593 ELEMHTFHGFGVDNKRSVILLADEYLEETEEASAFSDHATHLCPKYHLREN---LVESPL 649
Query: 673 KEFSSESF--VGTISNPFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSY 730
SE+ V T S P + ++ + S I L YLLEH+EV DE S E QELL WRQ
Sbjct: 650 HVSYSENTKKVNT-SLPGTSKNKGLSSRISLNYLLEHMEVRDEASTELQELLQWRQDFC- 707
Query: 731 SKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEA 790
+ SKD + DIFSIGC+LAEL+L +PLF+S+SLA YLE GDLP +++ELP T+++VEA
Sbjct: 708 TGNISKDIAGDIFSIGCVLAELYLMKPLFNSVSLATYLEGGDLPELIKELPPPTQVIVEA 767
Query: 791 CITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAM 850
CI +DW RRPSAKSLL+SPYF +TV+S++LF APLQL+A+ +RL YAA+FAK G LK M
Sbjct: 768 CIEQDWRRRPSAKSLLDSPYFSATVRSAHLFAAPLQLLAKGQTRLCYAASFAKQGVLKVM 827
Query: 851 GSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTG 910
G+F AE CA YCLPLV TPLS+ E E AYVLLKEF K L+P AV+ ++LP+IQKIL TTG
Sbjct: 828 GTFVAEMCAVYCLPLVTTPLSEDECELAYVLLKEFTKSLTPMAVQRLVLPSIQKILLTTG 887
Query: 911 YSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKXXXXXXXVLLIGSSEE 970
YSHLKVSLLQDSFVRE+WN+IGK+ YLEM+HPLVISNLY +P K VLLIGSSEE
Sbjct: 888 YSHLKVSLLQDSFVRELWNQIGKRVYLEMIHPLVISNLYNSPDKISASAASVLLIGSSEE 947
Query: 971 LGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDV 1030
LG P+TVHQTILPLI FG+GIC DGIDV+VRIG LLG FIV+QMLPLL+HV ID+
Sbjct: 948 LGAPVTVHQTILPLISYFGKGICTDGIDVLVRIGRLLGVNFIVKQMLPLLEHVVCFCIDL 1007
Query: 1031 SNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEIT 1090
S+ KPEPV SW +L+L DCL+TLDGLVA + E+++ EL + R CLHV VLM NLE+
Sbjct: 1008 SSMKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHELTKGRLCLHVRVLMQKNLELR 1067
Query: 1091 VLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKV 1150
VLQ AA++LM+ICQRIG ++TALHVLP LKELFDE AFS++ +D S SL ++ + K
Sbjct: 1068 VLQFAATSLMSICQRIGQEMTALHVLPQLKELFDEFAFSEKSTDASDSLSWKIRTAEQKF 1127
Query: 1151 DGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRI 1210
ES I+SRMDLVLLLYPSFASLLG+EKLRQ C TWLLLEQ+LL++HNWKWEYTG SSR
Sbjct: 1128 HPESPIKSRMDLVLLLYPSFASLLGMEKLRQGCPTWLLLEQYLLKHHNWKWEYTGRSSRY 1187
Query: 1211 SEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSV 1270
N+ A RP+L +G S+ P K+LLNG G S+PQSQG R+S +L +++ H V
Sbjct: 1188 ---NMEA-RPVLKQGPASKHTP-KVLLNGSGRSVPQSQGLRNSNHL----KLH-IHVP-V 1236
Query: 1271 ERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGAL 1330
E QEA N + EPW WFP+P WDG D +GR G KDE+ WKI+AS+LSS RAHHGAL
Sbjct: 1237 EGQEAVLNPLVHEPWSWFPSPVTCWDGLD-IGRFGNPKDENRWKIRASVLSSARAHHGAL 1295
Query: 1331 RSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS 1390
RS+ V +DECTVFT+GI PGFKG+VQKWEL ++CVS Y+ HEEVVNDI +LSS+G++AS
Sbjct: 1296 RSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSYHAHEEVVNDIGILSSTGKVAS 1355
Query: 1391 CDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXKINTDQVGMLNSNTLSSGI 1446
CDGT+HVWNSQTGKL+S+F+E K N++ S+ LSSGI
Sbjct: 1356 CDGTIHVWNSQTGKLISLFSESPSDQDQASSDPSS--KNNSNPCNRHASHGLSSGI 1409
|
|
| DICTYBASE|DDB_G0268088 lvsG "BEACH domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 2.2e-97, Sum P(8) = 2.2e-97
Identities = 97/218 (44%), Positives = 131/218 (60%)
Query: 450 HHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYC 509
HH+SD LSEL SY ARR + +LR VR+ YEPNEYP+TM+RLY+WTPDECIPEF+
Sbjct: 623 HHISD-ILSELTYYSYLARRTSVPLLRRFVRTNYEPNEYPATMERLYRWTPDECIPEFFT 681
Query: 510 DPQIFYSQHPGMTDLAVPPWAG--SPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSG 567
D IF S H M DL +P W S +EFIK+H +ALESD VS ++H WID+TFGY +SG
Sbjct: 682 DSTIFKSIHSDMPDLQLPDWVPNQSTQEFIKIHMNALESDHVSKQLHSWIDLTFGYLLSG 741
Query: 568 QAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCKFVRSQNNNEVDN 627
+ AI AKN+ L + T P++ G +QLF PHP + K + K+ R Q +
Sbjct: 742 EEAIKAKNLAL--MDTTIPRNNGIVQLFNHPHPKK------KYLKSLKYQRQQQTQQHQQ 793
Query: 628 VSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESF 665
+ P+ + E F++ + + NH +F
Sbjct: 794 QTQQQPQF----DTEFTIKFNESSFRYENQNINHNSTF 827
|
|
| UNIPROTKB|Q562E7 WDR81 "WD repeat-containing protein 81" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 660 (237.4 bits), Expect = 5.0e-84, Sum P(5) = 5.0e-84
Identities = 160/395 (40%), Positives = 220/395 (55%)
Query: 229 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 287
P C P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L
Sbjct: 213 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLR 269
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI----CDKPLVGFNSIADWCTIPTSPMIG 343
A+ H G+A ++ ++ + + S L + ++P N A P +
Sbjct: 270 AMDACHRQGLACGALSLYHIAVDEKLCSELRLDLSAYERPEEDENEEA-----PVA-RDE 323
Query: 344 CCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMV 403
I QG Q + S W G +SNF YL+ LN+LAGRR GD +H V
Sbjct: 324 AGIVSQEEQGGQPGQPTGQE-ELRSLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPV 382
Query: 404 MPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------I 448
+PWV+DF+T P F RDL KSK+RL KGD+QLDFTY + +
Sbjct: 383 LPWVVDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGGGEPPHV 437
Query: 449 PHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFY 508
PHH+SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY
Sbjct: 438 PHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFY 496
Query: 509 CDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQ 568
DP IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+
Sbjct: 497 TDPSIFRSIHPDMPDLDVPAWCSSSQEFVAAHRALLESREVSRDLHHWIDLTFGYKLQGK 556
Query: 569 AAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
A+ KNV L + T S G +QLF QPHP R
Sbjct: 557 EAVKEKNVCLHLVDAHTHLASYGVVQLFDQPHPQR 591
|
|
| UNIPROTKB|E2R4W6 WDR81 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 671 (241.3 bits), Expect = 1.5e-82, Sum P(5) = 1.5e-82
Identities = 161/393 (40%), Positives = 220/393 (55%)
Query: 230 GCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLSA 288
G L P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L A
Sbjct: 211 GSLACPSLLQAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLRA 270
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTS---PMIGCC 345
+ H G+A ++ ++ + + S L + D + IP + P G
Sbjct: 271 MDACHRQGLACGALTLHHIAVDEKLCSELRL-DLSAYERPKEDESEEIPVARDGPGSGPG 329
Query: 346 IEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMP 405
EG G S + W G +SNF YL+ LN+LAGRR GD +H V+P
Sbjct: 330 EEGGGRPGCP-----SCQEELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLP 384
Query: 406 WVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPH 450
WV+DF+T P F RDL KSK+RL KGD+QLDFTY + +PH
Sbjct: 385 WVVDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGTGGGEPPHVPH 439
Query: 451 HVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCD 510
H+SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY D
Sbjct: 440 HISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFYTD 498
Query: 511 PQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAA 570
P IF S HP M DL VP W GS +EF+ HR LES VS +HHWID+TFGYK+ G+ A
Sbjct: 499 PSIFCSIHPDMPDLDVPAWCGSSQEFVSAHRALLESPEVSQDLHHWIDLTFGYKLQGKEA 558
Query: 571 IDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
+ KNV L + T S G +QLF QPHP R
Sbjct: 559 VKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 591
|
|
| MGI|MGI:2681828 Wdr81 "WD repeat domain 81" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 659 (237.0 bits), Expect = 2.3e-82, Sum P(5) = 2.3e-82
Identities = 161/391 (41%), Positives = 218/391 (55%)
Query: 229 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 287
P C P++ LL++ ++ V P ++L +++ FSP L S+ V FL++++L
Sbjct: 211 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFLLFRVLR 267
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347
A+ H G+A ++ ++ + + S L + D S D + G I+
Sbjct: 268 AMDACHRQGLACGALSLHHIAVDEKLCSELRL-DLSAYEMPS-EDENQEGSEEKNGTGIK 325
Query: 348 GCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWV 407
+ Q + W G +SNF YL+ LN+LAGRR GD +H V+PWV
Sbjct: 326 SEKEGEGRTECPTCQK-ELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWV 384
Query: 408 IDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYS------------SSE---IPHHV 452
+DF+T P F RDL KSK+RL KGD+QLDFTY S E +PHH+
Sbjct: 385 VDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGSGEPPHVPHHI 439
Query: 453 SDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQ 512
SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+ WTPDECIPEFY DP
Sbjct: 440 SD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQTWTPDECIPEFYTDPS 498
Query: 513 IFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAID 572
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 499 IFCSIHPDMPDLDVPAWCSSNQEFVAAHRALLESWEVSQDLHHWIDLTFGYKLQGKEAVK 558
Query: 573 AKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
KNV L + T S G +QLF QPHP R
Sbjct: 559 EKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 589
|
|
| RGD|1311334 Wdr81 "WD repeat domain 81" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 645 (232.1 bits), Expect = 1.1e-79, Sum P(5) = 1.1e-79
Identities = 166/406 (40%), Positives = 227/406 (55%)
Query: 221 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVR 279
PS S+ P LR LL++ ++ V P ++L +++ FSP L S+ V
Sbjct: 204 PSRGSSACPSLLRAE------ALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVL 257
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI----CDKPLVGFNS-IADWC 334
F+++++L A+ H G+A ++ ++ + + S L + + P N +++
Sbjct: 258 FILFRVLRAMDACHRQGLACGALSLHHIAVDEKLCSELRLDLSAYEMPSEDENQEVSEEK 317
Query: 335 --TIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392
T S G GC + +L+ +DW G +SNF YL+ LN+LAG
Sbjct: 318 DRTGVKSEKDGEGRPGCPT--CQKELR-GLVLDWV-------HGRVSNFYYLMQLNRLAG 367
Query: 393 RRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYS-------- 444
RR GD +H V+PWV+DF+T P F RDL KSK+RL KGD+QLDFTY
Sbjct: 368 RRQGDPNYHPVLPWVVDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVA 422
Query: 445 ----SSE---IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQ 497
S E +PHH+SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+
Sbjct: 423 GGAGSGEPLHVPHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQT 481
Query: 498 WTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWI 557
WTPDECIPEFY DP IF S HP M DL VP W S +EF+ HR LES VS +HHWI
Sbjct: 482 WTPDECIPEFYTDPSIFCSIHPDMPDLDVPAWCSSNQEFVTAHRALLESWEVSQDLHHWI 541
Query: 558 DITFGYKMSGQAAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
D+TFGYK+ G+ A+ KNV L + T S G +QLF QPHP R
Sbjct: 542 DLTFGYKLQGKEAVKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 587
|
|
| FB|FBgn0032395 CG6734 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 576 (207.8 bits), Expect = 5.2e-64, Sum P(4) = 5.2e-64
Identities = 123/253 (48%), Positives = 156/253 (61%)
Query: 373 WWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS-RDLSKSKWR 431
W G+LSNF+YL LN GR + +H +MPWV DFS + G+ RDL+KSK+R
Sbjct: 348 WCNGQLSNFDYLTILNNACGRSLTNAAYHHIMPWVTDFSGR-----GGGAWRDLTKSKYR 402
Query: 432 LAKGDEQLDFTYSSS---------------EIPHHVSDECLSELAVCSYKARRLPLSVLR 476
L KGD LD Y+ + + PHHVSD LSE+ Y ARR P S+L
Sbjct: 403 LNKGDVHLDLMYAHASQHGSADGSYQAIGDQAPHHVSD-FLSEITYFVYMARRTPQSILC 461
Query: 477 TAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEF 536
VR ++ P EYP ++QRL +WTPDECIPEFY DP IF S H + DL +P WA PE+F
Sbjct: 462 AHVRPIWVPAEYPVSIQRLQEWTPDECIPEFYSDPMIFKSIHEDLPDLELPAWATCPEDF 521
Query: 537 IKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSV-GRLQLF 595
I HR+ALES VS R+HHWID+ FGYK+SG+AA+ +KNV L + + S G +QLF
Sbjct: 522 ICKHREALESQYVSERLHHWIDLNFGYKLSGKAAVKSKNVCLTLVDQHRNLSQRGIVQLF 581
Query: 596 TQPHPVRQTAT-W 607
HP R+ AT W
Sbjct: 582 ASAHPPRRYATPW 594
|
|
| UNIPROTKB|E1BRH2 WDFY3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 8.0e-21, Sum P(5) = 8.0e-21
Identities = 44/116 (37%), Positives = 66/116 (56%)
Query: 502 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 550
E IPEF+ P+ + + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2829 ELIPEFFYLPEFLLNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDFVS 2888
Query: 551 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 606
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2889 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2938
|
|
| UNIPROTKB|E1BRH3 WDFY3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 188 (71.2 bits), Expect = 8.2e-21, Sum P(5) = 8.2e-21
Identities = 44/116 (37%), Positives = 66/116 (56%)
Query: 502 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 550
E IPEF+ P+ + + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2847 ELIPEFFYLPEFLLNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDFVS 2906
Query: 551 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 606
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2907 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2956
|
|
| UNIPROTKB|E2RLD7 WDFY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 193 (73.0 bits), Expect = 1.2e-20, Sum P(6) = 1.2e-20
Identities = 44/116 (37%), Positives = 67/116 (57%)
Query: 502 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 550
E IPEF+ P+ ++ + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2828 ELIPEFFYLPEFLFNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDYVS 2887
Query: 551 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 606
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2888 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2937
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1678 | |||
| cd06071 | 275 | cd06071, Beach, BEACH (Beige and Chediak-Higashi) | 6e-82 | |
| smart01026 | 280 | smart01026, Beach, Beige/BEACH domain | 3e-77 | |
| pfam02138 | 274 | pfam02138, Beach, Beige/BEACH domain | 1e-70 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 9e-20 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-16 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-16 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-11 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-11 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 1e-11 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 9e-11 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 2e-09 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-09 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 5e-09 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-08 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-08 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 3e-08 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-07 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-07 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 6e-07 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-06 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 1e-06 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-06 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 1e-06 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 1e-06 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 3e-06 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-06 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 4e-06 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 4e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 5e-06 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 8e-06 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 9e-06 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 1e-05 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 3e-05 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 4e-05 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 4e-05 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 4e-05 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 4e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 5e-05 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-05 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 7e-05 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 8e-05 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 1e-04 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 1e-04 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 1e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-04 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-04 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 1e-04 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-04 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 2e-04 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 3e-04 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 3e-04 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 3e-04 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 3e-04 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 4e-04 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 4e-04 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 4e-04 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 4e-04 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 4e-04 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 5e-04 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 5e-04 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 6e-04 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 7e-04 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 9e-04 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 9e-04 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 0.001 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 0.001 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 0.001 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 0.001 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 0.001 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 0.001 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 0.001 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 0.001 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 0.001 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 0.002 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 0.002 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 0.002 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 0.004 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 0.004 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 0.004 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 0.004 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 0.004 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 0.004 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 0.004 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 0.004 |
| >gnl|CDD|100117 cd06071, Beach, BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes | Back alignment and domain information |
|---|
Score = 270 bits (692), Expect = 6e-82
Identities = 94/278 (33%), Positives = 129/278 (46%), Gaps = 50/278 (17%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS--RDLSKS 428
+W GE+SNFEYL++LN LAGR + D + + + PWVI T + + + S RDLSK
Sbjct: 2 KKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKP 61
Query: 429 KWRLAKGDEQLDFTYSSSEI---------PHHVSDECLSELAVCSYKARRLP-----LSV 474
L K QL S+ H S+ + V Y R P LS+
Sbjct: 62 IGALNKERLQLLKERYESDSDDSDPPFHYGSHYSNPAI----VLYYLVRLEPFTTLHLSL 117
Query: 475 LRTAVRS-VYEPNEYPSTMQRLYQ--WTPDECIPEFYCDPQIFYSQHP---------GMT 522
+ N PS+ + + E IPEFY P+ F + + +
Sbjct: 118 QGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFFLNINKFDFGKQDGEKVN 177
Query: 523 DLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 582
D+ +PPWA SPEEFI+ HR+ALES+ VS +HHWID+ FGYK G+ A+ AKNV P +
Sbjct: 178 DVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTY 237
Query: 583 P------------------TKPKSVGRLQLFTQPHPVR 602
+QLFT+PHP R
Sbjct: 238 EGSVDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275
|
This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins. Length = 275 |
| >gnl|CDD|214982 smart01026, Beach, Beige/BEACH domain | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 3e-77
Identities = 94/287 (32%), Positives = 129/287 (44%), Gaps = 63/287 (21%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSKS 428
+W GE+SNFEYL+ LN LAGR + D T + V PWV+ D++++ D + S RDLSK
Sbjct: 2 QKWQNGEISNFEYLMHLNTLAGRSYNDLTQYPVFPWVLADYTSETLDLSNPSTFRDLSK- 60
Query: 429 KWRLAKGDEQLDFTYS-------SSEIPHHVSDECLSELAVCSYKARRLPL--------- 472
A E+L+F Y P H S V Y R P
Sbjct: 61 PIG-ALNPERLEFFYERYEELEDPDIPPFHYGTHYSSAGIVLYYLIRLEPFTTLFLQLQG 119
Query: 473 ------SVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHP------- 519
L +V + + +M + E IPEF+ P+ + +
Sbjct: 120 GRFDHADRLFHSVAATWRSA-SLESMTDVK-----ELIPEFFYLPEFLVNINGFDFGTRQ 173
Query: 520 ---GMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKN 575
+ D+ +PPWA GSPEEFI+ HR+ALES+ VS +HHWID+ FGYK G+ A++A N
Sbjct: 174 DGEDVDDVELPPWAKGSPEEFIRKHREALESEYVSQHLHHWIDLIFGYKQRGKEAVEALN 233
Query: 576 VMLP----------SSEPTKPKSVGR----------LQLFTQPHPVR 602
V P S E + QLF +PHP R
Sbjct: 234 VFHPLTYEGAVDLDSIEDPVERKALEGQIHNFGQTPKQLFKEPHPPR 280
|
The BEACH domain was described in the BEIGE protein (D1035670) and in the highly homologous CHS protein. The BEACH domain is usually followed by a series of WD repeats. The function of the BEACH domain is unknown. Length = 280 |
| >gnl|CDD|216896 pfam02138, Beach, Beige/BEACH domain | Back alignment and domain information |
|---|
Score = 237 bits (608), Expect = 1e-70
Identities = 91/274 (33%), Positives = 135/274 (49%), Gaps = 43/274 (15%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSK- 427
+W GE+SNFEYL+ LN LAGR + D + + V PWV+ D++++ D N S RDLSK
Sbjct: 2 EKWQNGEISNFEYLMLLNTLAGRSFNDLSQYPVFPWVLADYTSETLDLNDPSTYRDLSKP 61
Query: 428 ----SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY 483
++ RL K E+ + P H S +V Y R P + L ++
Sbjct: 62 IGALNEERLKKFKERYEE-LDEVGPPFHYGSHYSSPGSVLHYLIRLEPFTTLHIELQGGK 120
Query: 484 --EPNEYPSTMQRLYQWTPD------ECIPEFYCDPQIFYSQHP---------GMTDLAV 526
+ S+++ ++ + E IPEF+ P+ + + + D+ +
Sbjct: 121 FDHADRLFSSIEEAWKSVSESMNDVKELIPEFFYLPEFLKNINNFDLGKRDGEKVDDVEL 180
Query: 527 PPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP 586
PPWA SPEEF+ +R ALESD VS +H+WID+ FGYK G+ AI+AKNV P +
Sbjct: 181 PPWAKSPEEFVYKNRKALESDYVSENLHNWIDLIFGYKQRGEEAIEAKNVFHPLTYEDIV 240
Query: 587 ----------------KSVGRL--QLFTQPHPVR 602
+ G+ QLFT+PHP R
Sbjct: 241 DKIKDPVEREAIEAQISNFGQTPKQLFTEPHPKR 274
|
Length = 274 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 9e-20
Identities = 65/321 (20%), Positives = 123/321 (38%), Gaps = 66/321 (20%)
Query: 1323 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVL 1382
++ H G + VA D + T GT++ W+L + GH V D+
Sbjct: 5 LKGHTGGVTCVAFSPDGKLLATGSGD----GTIKVWDLETGELLRTLKGHTGPVRDVAAS 60
Query: 1383 SSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440
+ +AS D T+ +W+ +TG+ + H SS ++ ++
Sbjct: 61 ADGTYLASGSSDKTIRLWDLETGECVRTLTG------HTSYVSS-VAFSPDGRI------ 107
Query: 1441 TLSSGILSTAFDGN-----------LYTCLHH---IECV------ERLVVGIGNGSLRFI 1480
+ S++ D L T H + V + +G+++
Sbjct: 108 -----LSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLW 162
Query: 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540
D+ G+ + T G V+++ + + + S G +L+D
Sbjct: 163 DLRTGKCVA------TLTGHTGEVNSVAFSPDGEK-----------LLSSSSDGTIKLWD 205
Query: 1541 VRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1599
+ +G + + R H+ V +A +P+ +LL S S D T+R+WDLR Q GHTN
Sbjct: 206 LSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQ--TLSGHTNS 263
Query: 1600 ISGFSVW--GQDVISISNNKI 1618
++ + G+ + S S +
Sbjct: 264 VTSLAWSPDGKRLASGSADGT 284
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 2e-16
Identities = 64/318 (20%), Positives = 112/318 (35%), Gaps = 87/318 (27%)
Query: 1369 YYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1426
GH V + +A+ DGT+ VW+ +TG+LL
Sbjct: 5 LKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTL----------------- 47
Query: 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ 1486
K +T V + ++A L G + ++R D+ G+
Sbjct: 48 -KGHTGPVR---------DVAASADG-------------TYLASGSSDKTIRLWDLETGE 84
Query: 1487 KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV 1546
+ G S VS++ +++ +++DV +G
Sbjct: 85 CVRTLTG------HTSYVSSVAF-----------SPDGRILSSSSRDKTIKVWDVETGKC 127
Query: 1547 IASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSV 1605
+ + R H +V +A +P+ + SSS D T+++WDLR GHT ++ +
Sbjct: 128 LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVA--TLTGHTGEVNSVA- 184
Query: 1606 WGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLS-------SISI 1658
S K+ SS + KL+ + G K L L S++
Sbjct: 185 -----FSPDGEKLLSSSSDGTI-----------KLWDLSTG-KCLGTLRGHENGVNSVAF 227
Query: 1659 LPFSRLFLVGTEDGYLRL 1676
P L G+EDG +R+
Sbjct: 228 SPDGYLLASGSEDGTIRV 245
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 79.7 bits (197), Expect = 8e-16
Identities = 58/275 (21%), Positives = 109/275 (39%), Gaps = 69/275 (25%)
Query: 1313 WKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG 1371
W ++ + ++ H + SVA D + ++ T++ W++ C++ G
Sbjct: 78 WDLETGECVRTLTGHTSYVSSVAFSPD-GRILSSS---SRDKTIKVWDVETGKCLTTLRG 133
Query: 1372 HEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429
H + VN + +AS DGT+ +W+ +TGK ++ + H
Sbjct: 134 HTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATL------TGH----------- 176
Query: 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLH 1489
+ + S AF + E+L+ +G+++ D++ G+ L
Sbjct: 177 -------------TGEVNSVAFSPDG----------EKLLSSSSDGTIKLWDLSTGKCLG 213
Query: 1490 LWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS--WIAAGLSSGQCRLFDVRSGNVI 1547
RG + + + SP +A+G G R++D+R+G +
Sbjct: 214 TLRGHE---------NGVNSV----------AFSPDGYLLASGSEDGTIRVWDLRTGECV 254
Query: 1548 ASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1581
+ H VT LA +P+ L S S D T+RIWD
Sbjct: 255 QTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
L HPN+ + G+ + + V+ +L+++L+ + L SE + ++ Q+L +
Sbjct: 48 LNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKL-SEDEILRILLQILEGLE 106
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
YLHS GI HR + P N+LL + + D
Sbjct: 107 YLHSNGIIHRDLKPENILLDSDNGK-VKLAD 136
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 69.0 bits (167), Expect = 1e-11
Identities = 67/310 (21%), Positives = 126/310 (40%), Gaps = 37/310 (11%)
Query: 1313 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH 1372
++ ++ H ++ S+A D + + GT++ W+L +S GH
Sbjct: 141 LSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGS---SLDGTIKLWDLRTGKPLSTLAGH 197
Query: 1373 EEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL-SVFAEQSMDSLHGGSPSSS--I 1426
+ V+ + G + S DGT+ +W+ TGKLL S + S + SP S
Sbjct: 198 TDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLA 257
Query: 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ 1486
S + + + + + SS + + + + + + L G +G++R D+ G+
Sbjct: 258 SGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGK 317
Query: 1487 KLHLWR-----GEPTELGFPSLVSAICACGSE--------------KMQAGGAVASPSW- 1526
L G + L F S + + GS+ G S
Sbjct: 318 LLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVS 377
Query: 1527 -------IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLR 1578
+++G + G RL+D+ +G+++ + H VT L +P+ L S S D T+R
Sbjct: 378 FSPDGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIR 437
Query: 1579 IWDLRRNWPS 1588
+WDL+ + S
Sbjct: 438 LWDLKTSLKS 447
|
Length = 466 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 1e-11
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 27/105 (25%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPYT--------------LENILQFSPNALKSEW 276
LRH N+ GL+ + P +P L +++ SP L ++
Sbjct: 55 HLRHENII---------GLLDILRPPSPEDFNDVYIVTELMETDLHKVIK-SPQPL-TDD 103
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
H+++ +YQ+L + YLHS + HR + PSN+L+ +C L ICD
Sbjct: 104 HIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DLKICD 146
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.6 bits (158), Expect = 9e-11
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
LRH N+ + + G + V TL +L+ SP L + VR ++QLL AIAY
Sbjct: 57 LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPD-AVRSYIWQLLQAIAY 115
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
HS I HR + P N+L+++S L +CD
Sbjct: 116 CHSHNIIHRDIKPENILVSES--GVLKLCD 143
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 61.6 bits (148), Expect = 2e-09
Identities = 76/335 (22%), Positives = 124/335 (37%), Gaps = 73/335 (21%)
Query: 1348 GPGFKGTVQKWEL-TRINCVSGYYGHEEVVNDICVLSSSGRIASC---DGTLHVWNSQTG 1403
GTV+ W+L T + GH E V + +AS DGT+ +W+ +TG
Sbjct: 129 SSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTG 188
Query: 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE 1463
K LS A +TD V L + ++++
Sbjct: 189 KPLSTLAG------------------HTDPVSSLAFSPDGGLLIASGSS----------- 219
Query: 1464 CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523
+G++R D++ G+ L ++ S
Sbjct: 220 ----------DGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSP-----------------D 252
Query: 1524 PSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1581
S +A+G S G RL+D+RS +++ + H V +A +P+ LL S S D T+R+WD
Sbjct: 253 GSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWD 312
Query: 1582 LRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLY 1641
L KGH +S S + D + + +DG RL +
Sbjct: 313 LETGKLLSSLTLKGHEGPVSSLS-FSPDGSLLVS----------GGSDDGTIRLWDLRTG 361
Query: 1642 MVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1676
+ S + S+S P R+ G+ DG +RL
Sbjct: 362 KPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRL 396
|
Length = 466 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 2e-09
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
SE RF + Q+LSA+ YLHS GI HR + P N+LL +
Sbjct: 95 SEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDG 134
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 5e-09
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 263 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
NIL+ + H R++MYQLL A+ Y+HS + HR + PSN+LL C
Sbjct: 102 NILE--------DVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC 144
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-08
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
L HPN+ +L + + G + V L +++ L E ++ +YQLL +A
Sbjct: 54 ELNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGL-PESLIKSYLYQLLQGLA 112
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ HS GI HR + P N+L+ L + D
Sbjct: 113 FCHSHGILHRDLKPENLLINTEG--VLKLAD 141
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 3e-08
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
SE + + Q+L + YLHS GI HR + P N+LL
Sbjct: 96 SEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILL 131
|
Length = 260 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 3e-08
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 232 LRHPNVAPVLGLL--KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 289
LRHPN+ + ++ K G I V + L +L SP +E ++ M QLL +
Sbjct: 55 LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLD-SPEVKFTESQIKCYMKQLLEGL 113
Query: 290 AYLHSLGIAHRSVCPSNVLLTD 311
YLHS GI HR + SN+L+ +
Sbjct: 114 QYLHSNGILHRDIKGSNILINN 135
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 2e-07
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 232 LRHPNVAPVLGLLKTSGL----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLS 287
+H N+ + +L+ G + V+ L +I+ S L +E H+R+ +YQLL
Sbjct: 61 FKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHII-HSDQPL-TEEHIRYFLYQLLR 118
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSC 313
+ Y+HS + HR + PSN+L+ + C
Sbjct: 119 GLKYIHSANVIHRDLKPSNLLVNEDC 144
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (131), Expect = 2e-07
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L+HPN+ +L ++ T + V L+ L P L S ++ +MYQLL +AY
Sbjct: 55 LKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPL-SPNLIKSIMYQLLRGLAY 113
Query: 292 LHSLGIAHRSVCPSNVLLTDS 312
HS I HR + P N+L+
Sbjct: 114 CHSHRILHRDLKPQNILINRD 134
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 6e-07
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 268 SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
S L + H ++ +YQLL + Y+HS + HR + PSN+LL +C L ICD
Sbjct: 101 SSQTLSDD-HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC--DLKICD 151
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLAVYL------ENGDLPGVMEELPSHTRILVEACITK 794
DI+S+G +L EL +P F + L P ++ + L+ + K
Sbjct: 178 DIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVK 237
Query: 795 DWTRRPSAKSLLESPYF 811
D +R +A+ L+ P+F
Sbjct: 238 DPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 1e-06
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
S+ H++FL+YQ+L + Y+HS GI HR + PSN+ + + C
Sbjct: 116 SDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311
SE RF +++ A+ YLHSLGI +R + P N+LL
Sbjct: 91 SEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA 128
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 1e-06
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 232 LRHPNVAPVLGLLKTSGL--------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 283
+H NV L +L+ + +T ++ L I+ SP L S+ HV+ +Y
Sbjct: 56 FKHDNVLSALDILQPPHIDPFEEIYVVTELMQSD---LHKII-VSPQPLSSD-HVKVFLY 110
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
Q+L + YLHS GI HR + P N+L+ +C L ICD
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGNLLVNSNC--VLKICD 146
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 261 LENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
L NI++ L E HV+FL+YQLL + Y+HS GI HR + PSNV + + C
Sbjct: 106 LNNIVKC--QKLSDE-HVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 3e-06
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
+HP V +L + V+ P L +L+ L E V+ M LL +AY
Sbjct: 56 CQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPL-PEAQVKSYMRMLLKGVAY 114
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+H+ GI HR + P+N+L++ L I D
Sbjct: 115 MHANGIMHRDLKPANLLISAD--GVLKIAD 142
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 4e-06
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRI------LVEA 790
D++S+G +L EL +P F + L + P + + P + L++
Sbjct: 181 DVWSLGVILYELLTGKPPFSGENILDQLQLIRRILG-PPLEFDEPKWSSGSEEAKDLIKK 239
Query: 791 CITKDWTRRPSAKSLLESPYF 811
C+ KD ++RP+A+ +L+ P+F
Sbjct: 240 CLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 4e-06
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 232 LRHPNVAPVLGLLKTSGL--ITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSA 288
L+HPN+ V ++ S L I V+ + L++++ L+SE V+ LM QLLS
Sbjct: 61 LQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSE--VKCLMLQLLSG 118
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+A+LH I HR + SN+LL + L ICD
Sbjct: 119 VAHLHDNWILHRDLKTSNLLLNNR--GILKICD 149
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 50.9 bits (120), Expect = 4e-06
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 234 HPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALK-SEWHVRFLMYQLLSAIAY 291
PN+ + + G + V+ +LE++L+ SE F++ Q+LSA+ Y
Sbjct: 57 PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
LHS GI HR + P N+LL + + D
Sbjct: 117 LHSKGIIHRDIKPENILLDRDG-RVVKLID 145
|
Length = 384 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 5e-06
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+++L+ + L E + ++ +LL + YLHS GI HR + +N+LLT
Sbjct: 83 SLKDLLKSTNQTLT-ESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG 135
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 8e-06
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L HP V +L + GL V+PK L L L V + QLLSAI Y
Sbjct: 217 LSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPL-GLAQVTAVARQLLSAIDY 275
Query: 292 LHSLGIAHRSVCPSNVLL 309
+H GI HR + NVL+
Sbjct: 276 IHGEGIIHRDIKTENVLV 293
|
Length = 461 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 9e-06
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311
RF ++L A+ YLHS GI HR + P N+LL
Sbjct: 104 TRFYAAEILLALEYLHSKGIIHRDLKPENILLDK 137
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-05
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+++ +YQ+L + Y+HS G+ HR + PSN+L+ ++C L ICD
Sbjct: 110 IQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DLKICD 151
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-05
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 1543 SGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1581
SG ++ + + H G VT +A +P+ L S S D T+++WD
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 4e-05
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 121 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 157
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 4e-05
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
H+++ +YQ+L + Y+HS + HR + PSN+LL +C L ICD
Sbjct: 107 HIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC--DLKICD 149
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 4e-05
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 122 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 4e-05
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 219 GVP--SFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 276
GVP + E+S+ L+H N+ + ++ T +T V L + P L +
Sbjct: 45 GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHP-Y 103
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 330
+VR M+QLL +AY+H I HR + P N+L+ S L + D L SI
Sbjct: 104 NVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI--SYLGELKLADFGLARAKSI 155
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 5e-05
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+R Q+L +AYLHS GI HR + +N+L+
Sbjct: 103 IRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG 138
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 5e-05
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
LRH N+ ++ + + + V +T+ + L+ PN L VR ++Q+L I +
Sbjct: 57 LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDES-RVRKYLFQILRGIEF 115
Query: 292 LHSLGIAHRSVCPSNVLLTDS 312
HS I HR + P N+L++ S
Sbjct: 116 CHSHNIIHRDIKPENILVSQS 136
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 7e-05
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 232 LRHPNVAPVLGLL-----KTSGLITSVIPKTPYT-------LENILQFSPNALKSEWHVR 279
L+HPNV P++ + K+ SV TPY LEN P+ +E ++
Sbjct: 64 LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-----PSVKLTESQIK 118
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311
M QLL I YLH I HR + +N+L+ +
Sbjct: 119 CYMLQLLEGINYLHENHILHRDIKAANILIDN 150
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 8e-05
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL--VGFN 328
H +F +YQLL A+ Y+H+ + HR + P N+L C L ICD L V FN
Sbjct: 104 HHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KLKICDFGLARVAFN 155
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 741 DIFSIGCLLAELHLRRPLFDS---ISLAVYLENGDLPGVMEELPSHTRILVEACITKDWT 797
DI+S+GCL+ EL P F + + LA ++ G + S ++++ + D
Sbjct: 192 DIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPD 251
Query: 798 RRPSAKSLLESPY 810
+RPS + LL+ P
Sbjct: 252 KRPSTEELLQLPL 264
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 203 EGKASGQESKNFLRLIGVP-----SFDES-SVPGCLRHPNVAPVLGLLKTSGLITSVIPK 256
+ GQE L+++G +F E+ S+ L H ++ + G+ I V
Sbjct: 23 DIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIM-VEEY 81
Query: 257 TPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
+ L+ L N + W + + QL SA+ YL + H +VC N+L+
Sbjct: 82 VKFGPLDVFLHREKNNVSLHWKL-DVAKQLASALHYLEDKKLVHGNVCGKNILVA 135
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-04
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 17/90 (18%)
Query: 232 LRHPNVAPVLG--LLKTSGLITSVIPKTPYTLENILQF---------SPNALKSEWHVRF 280
L+H NV ++ L + + + L I++F P+ +KS
Sbjct: 59 LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKS------ 112
Query: 281 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
L++Q+L+ + YLHS + HR + P+N+L+
Sbjct: 113 LLWQILNGVHYLHSNWVLHRDLKPANILVM 142
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 1e-04
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 723 LWRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSISLAVYLENGDLPGVMEELP 781
+WR+K YSK D+FS+G LL E L L+RP FD ++ + + L G + LP
Sbjct: 216 IWRRKP-YSK------KADMFSLGVLLYELLTLKRP-FDGENMEEVM-HKTLAGRYDPLP 266
Query: 782 SHT----RILVEACITKDWTRRPSAKSLLESP 809
+ +V A ++ D RRPS+ LL P
Sbjct: 267 PSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 1e-04
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 1544 GNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1581
G ++ + + H G VT +A +P+ +LL S S D T+R+WD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
SE H R MYQLL + Y+HS + HR + P+NV +
Sbjct: 112 SEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI 147
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-04
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 741 DIFSIGCLLAEL-HLRRPLFDS---ISLAVYLENGDLPGVMEELPSHT----RILVEACI 792
DI+S+GC+L EL L+ P F+ + LA+ + G P +PS R LV + +
Sbjct: 185 DIWSLGCVLYELCTLKHP-FEGENLLELALKILKGQYP----PIPSQYSSELRNLVSSLL 239
Query: 793 TKDWTRRPSAKSLLESPYF 811
KD RPS +L+SP+
Sbjct: 240 QKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 2e-04
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
++ H + +YQ+L + Y+HS + HR + P N+L+ C L ICD
Sbjct: 103 TDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--ELKICD 148
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-04
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 32/103 (31%)
Query: 741 DIFSIGCLLAELHLRRPLF------DSISLAVYL----------ENGDLPGVMEEL--PS 782
DI+ IGC+ AE+ RRP+ D + L L LPG +
Sbjct: 209 DIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTN 268
Query: 783 HTRILVE--------------ACITKDWTRRPSAKSLLESPYF 811
+ R L E ++ D +R +A LE PYF
Sbjct: 269 YPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 3e-04
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
SE ++FL+YQ+L + Y+H+ GI HR + P N+ + + C
Sbjct: 116 SEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
SE V+F + +++ A+ YLHS GI HR + P N+LL
Sbjct: 98 SEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL 133
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 3e-04
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L+HPN+ ++ + + + V +T+ N L+ +P + E ++ +++Q L A+ +
Sbjct: 57 LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGV-PEHLIKKIIWQTLQAVNF 115
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
H HR V P N+L+T + +CD
Sbjct: 116 CHKHNCIHRDVKPENILITKQ--GQIKLCD 143
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 4e-04
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 219 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 276
GVPS E S+ ++H N+ + ++ + + V L+ + SP+ K+
Sbjct: 43 GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPR 102
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
++ +YQ+L IAY HS + HR + P N+L+
Sbjct: 103 LIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLI 135
|
Length = 294 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 4e-04
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS-LAVYLENGDLPGVMEELPSH---TRI-LVEACITKD 795
DI+SIGC + E+ +P S+ LA G G+M LP I V +C+T+D
Sbjct: 190 DIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRD 249
Query: 796 WTRRPSAKSLLESPY 810
RPSA LL +
Sbjct: 250 QHERPSALQLLRHDF 264
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 4e-04
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 222 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 278
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 121
Query: 279 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 4e-04
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
QLL +AYLHS GI HR + P+N+ L +
Sbjct: 107 QLLEGLAYLHSHGIVHRDIKPANIFLDHN 135
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-04
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
E V+ MYQLL ++ ++H GI HR + P N+L+ D
Sbjct: 98 PEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDI 137
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 5e-04
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
SE +R ++YQ+L +A++H G HR + P N+L++
Sbjct: 97 SESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP 135
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 5e-04
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 219 GVP--SFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 276
G P + E+S+ L+H N+ + ++ T +T V L + P L E
Sbjct: 45 GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPE- 103
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
+V+ ++QLL ++Y+H I HR + P N+L++D+
Sbjct: 104 NVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT 139
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 6e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
SE V++L+YQ+L + Y+HS GI HR + P N+ + + C
Sbjct: 115 SEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC 154
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 7e-04
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
++ LM QLL + +LHS I HR + P N+L+T
Sbjct: 105 PPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT 141
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 9e-04
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLE-----NILQFSPNALKSEWHVRFLMYQLL 286
L+HPN+ +L + I V LE + +P +KS M L
Sbjct: 59 LKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKS------YMLMTL 112
Query: 287 SAIAYLHSLGIAHRSVCPSNVLLTD 311
+ YLHS I HR + P+N+L+
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLIAS 137
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 9e-04
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDS---ISLAVYLENGDLPGVMEELPSHTRILVEACIT 793
D DI+S+GC+L E+ F+ +S+ + + G P + E ++++ +
Sbjct: 183 DSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLN 242
Query: 794 KDWTRRPSAKSLLESPY 810
KD + RPSA +L +P+
Sbjct: 243 KDPSLRPSAAEILRNPF 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.001
Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 38/105 (36%)
Query: 741 DIFSIGCLLAELHLRRPLF-------------------------DSISLAVYLENGDLPG 775
D++S+GC+ AEL LR P SL Y+E P
Sbjct: 185 DMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPP 244
Query: 776 VMEELPSHTRI---------LVEACITKDWTRRPSAKSLLESPYF 811
P L++ +T + +R +A+ LE PYF
Sbjct: 245 ----TPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 0.001
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
++H N+ ++ + I V+ L+ + +E V+ ++ Q+L+ +
Sbjct: 77 IKHENIMGLVDVYVEGDFINLVMDIMASDLKKV--VDRKIRLTESQVKCILLQILNGLNV 134
Query: 292 LHSLGIAHRSVCPSNVLLTD 311
LH HR + P+N+ +
Sbjct: 135 LHKWYFMHRDLSPANIFINS 154
|
Length = 335 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E S+ L+H N+ + ++ T +T V L+ L N L S +V+ M+Q
Sbjct: 53 EVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGN-LMSMHNVKIFMFQ 111
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTD 311
LL ++Y H I HR + P N+L+ +
Sbjct: 112 LLRGLSYCHKRKILHRDLKPQNLLINE 138
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 0.001
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTS-GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLM 282
E+++ L HPN+ +L + GL+ +V P TL +L + AL + R LM
Sbjct: 28 ETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLA-ADGALPAGETGR-LM 85
Query: 283 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
Q+L A+A H+ GI HR + P N++++ +
Sbjct: 86 LQVLDALACAHNQGIVHRDLKPQNIMVSQT 115
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.001
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 275 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
E R + +++ A+ YLHS GI HR + P N+L+ +
Sbjct: 92 EDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN 129
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 127 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.001
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 741 DIFSIGCLLAELHLRR-PLFDS-----ISLAVYLENGDLPGVMEELPS-HTRILVEACIT 793
DI+S+G L E L + P L + +G P + E S R + AC+
Sbjct: 182 DIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQ 241
Query: 794 KDWTRRPSAKSLLESP 809
KD +RPSA LL+ P
Sbjct: 242 KDPKKRPSAAELLQHP 257
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.001
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 232 LRHPNVAPVLGLLKTSGL--ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 289
LRHPN+ + ++ L I V+ L ++L P SE V+ LM QLL +
Sbjct: 63 LRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPF-SESQVKCLMLQLLRGL 121
Query: 290 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
YLH I HR + SN+LLTD L I D
Sbjct: 122 QYLHENFIIHRDLKVSNLLLTDK--GCLKIAD 151
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.002
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 29/100 (29%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLA---------------------VYL--------ENG 771
D++S+GC+ AEL RRPLF S A V L
Sbjct: 188 DMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPR 247
Query: 772 DLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+ E+ L++ +T + +R SA L+ PYF
Sbjct: 248 SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 224 DESSVPGCLRHPNVAPVLG-LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 282
+E + L+HPN+ + + L+ + TL + + L E V + +
Sbjct: 48 NEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYL 107
Query: 283 YQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
+Q++SA++Y+H GI HR + N+ LT
Sbjct: 108 FQIVSAVSYIHKAGILHRDIKTLNIFLT 135
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.002
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E+S+ L+H N+ + ++ T +T V L+ + L +VR ++Q
Sbjct: 53 EASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMH-NVRLFLFQ 111
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTD 311
LL +AY H + HR + P N+L+++
Sbjct: 112 LLRGLAYCHQRRVLHRDLKPQNLLISE 138
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.004
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 44/126 (34%)
Query: 720 ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLF-------------------- 759
E+LL + +SYS DI+++GC++AEL+ RPLF
Sbjct: 168 EILL--RSTSYS------SPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPT 219
Query: 760 -----DSISLAVYLENGDLPGVMEELPSHTRI---------LVEACITKDWTRRPSAKSL 805
+ LA L P H I L++ + D +RP+A
Sbjct: 220 KQDWPEGYKLASKL-GFRFP-QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQA 277
Query: 806 LESPYF 811
L+ PYF
Sbjct: 278 LQHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.004
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 219 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 276
GVPS E S+ L HPN+ +L ++ + + V L+ + SP
Sbjct: 40 GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPP 99
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
++ +YQLL IAY HS + HR + P N+L+
Sbjct: 100 LIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI 132
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.004
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY----TLENILQFSPNALKSEWHVRFLMYQLLS 287
L+HPN+ +G ++TS + + Y +L I++ E V +YQ+L
Sbjct: 56 LKHPNIVKYIGSIETSDSLYII---LEYAENGSLRQIIK--KFGPFPESLVAVYVYQVLQ 110
Query: 288 AIAYLHSLGIAHRSVCPSNVLLT 310
+AYLH G+ HR + +N+L T
Sbjct: 111 GLAYLHEQGVIHRDIKAANILTT 133
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 33/106 (31%)
Query: 738 CSKDIFSIGCLLAELHLRRPLF--DS-------ISLAVYLENGDL-PGVMEELPSHTRI- 786
DI+SIG + AE+ ++PLF DS I + D+ PGV LP +
Sbjct: 181 TPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV-TSLPDYKNTF 239
Query: 787 ---------------------LVEACITKDWTRRPSAKSLLESPYF 811
L+E + D +R SAK L PYF
Sbjct: 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.004
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
LQ P SE RF ++L A+ YLH LGI +R + P N+LL +S
Sbjct: 92 LQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHES 139
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
++ MYQLL +A+ H G+ HR + P N+L+
Sbjct: 112 IKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.004
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 261
AS +E + FL E+S+ L HPN+ +LG+ ++T +P L
Sbjct: 39 GASEEEREEFLE--------EASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGD--L 88
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
+ L+ L + ++ Q+ + YL S HR + N L+T++
Sbjct: 89 LDFLRKHGEKLTLKDLLQM-ALQIAKGMEYLESKNFVHRDLAARNCLVTEN 138
|
Length = 258 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.004
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 212 KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQ--FS 268
K FLR E+ + L HP + PV + + +P YTL+++L+ +
Sbjct: 47 KRFLR--------EAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQ 98
Query: 269 PNALKSEWHVR-----FL--MYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
+L E + FL +++ + I Y+HS G+ HR + P N+LL
Sbjct: 99 KESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL 146
|
Length = 932 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1678 | |||
| KOG4190 | 1034 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| cd06071 | 275 | Beach BEACH (Beige and Chediak-Higashi) domains, i | 100.0 | |
| PF02138 | 270 | Beach: Beige/BEACH domain; InterPro: IPR000409 The | 100.0 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG1787 | 1126 | consensus Kinase A-anchor protein Neurobeachin and | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.98 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.98 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.98 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.98 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.98 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.98 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.97 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.97 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.97 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| KOG1786 | 1081 | consensus Lysosomal trafficking regulator LYST and | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.97 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.97 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.97 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.97 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.97 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.97 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.97 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.97 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.97 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.96 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.96 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.96 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.96 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.96 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.96 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.96 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.96 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.96 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.96 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.96 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.96 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.96 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.96 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.96 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.96 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.96 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.96 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.96 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.96 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.96 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.96 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.96 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.96 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.96 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.96 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.96 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.96 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.96 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.96 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.96 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.96 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.96 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.96 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.96 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.96 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.96 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.96 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.96 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.95 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.95 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.95 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.95 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.95 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.95 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.95 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.95 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.95 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.95 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.95 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.95 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.95 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.95 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.95 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.95 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.95 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.95 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.95 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.95 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.95 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.95 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.95 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.95 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.95 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.95 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.95 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.95 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.95 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.95 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.95 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.95 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.95 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.95 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.95 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.95 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.94 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.94 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.94 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.94 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.94 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.94 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.94 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.94 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.94 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.94 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.94 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.94 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.94 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.94 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.94 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.94 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.94 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.94 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.94 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.94 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.94 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.94 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.94 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.94 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.94 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.94 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.94 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.94 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.94 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.93 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.93 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.93 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.93 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.93 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.93 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.93 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.93 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.93 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.93 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.93 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.93 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.93 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.93 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.93 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.93 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.92 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.92 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.92 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.92 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.92 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.92 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.92 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.92 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.92 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.92 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.92 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 99.92 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.92 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.92 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.92 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.92 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.91 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.91 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.91 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.91 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.91 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.91 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.91 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.91 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.91 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.91 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.91 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.91 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.91 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.91 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.91 | |
| PTZ00420 | 568 | coronin; Provisional | 99.91 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.91 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.91 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.91 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.91 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.91 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.91 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.91 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.91 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.91 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.91 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.91 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.91 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.91 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.91 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.9 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.9 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.9 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.9 | |
| PTZ00421 | 493 | coronin; Provisional | 99.9 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.9 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.9 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.9 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.9 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.9 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.9 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.9 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.9 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.9 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.9 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.9 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.9 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.9 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 99.9 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.9 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.9 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.9 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.9 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.9 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.9 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.9 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.9 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.9 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.9 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.9 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.9 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.9 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.9 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.9 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.9 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.9 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 99.9 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.9 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.89 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.89 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.89 | |
| KOG0294 | 362 | consensus WD40 repeat-containing protein [Function | 99.89 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.89 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.89 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.89 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.89 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.89 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.89 | |
| KOG0301 | 745 | consensus Phospholipase A2-activating protein (con | 99.89 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.89 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.89 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.89 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.89 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.89 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.89 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.89 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.89 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.89 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.89 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.89 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.88 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.88 | |
| PTZ00420 | 568 | coronin; Provisional | 99.88 | |
| PTZ00421 | 493 | coronin; Provisional | 99.88 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.88 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.88 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 99.88 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.88 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.88 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.88 | |
| KOG0301 | 745 | consensus Phospholipase A2-activating protein (con | 99.88 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.88 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.88 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.88 | |
| KOG1539 | 910 | consensus WD repeat protein [General function pred | 99.88 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.88 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.88 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.88 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.88 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.88 | |
| KOG1063 | 764 | consensus RNA polymerase II elongator complex, sub | 99.87 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.87 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.87 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.87 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.87 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.87 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.87 | |
| KOG0299 | 479 | consensus U3 snoRNP-associated protein (contains W | 99.87 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.86 | |
| KOG0299 | 479 | consensus U3 snoRNP-associated protein (contains W | 99.86 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 99.86 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.86 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.86 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.86 |
| >KOG4190 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-65 Score=580.85 Aligned_cols=580 Identities=22% Similarity=0.301 Sum_probs=420.2
Q ss_pred chhhhhhhhcccchhhHHHHhhhHHHHHhcccccCCCCCCCCcccchhhHHHHHHhhhcccccccchhHHHHHhhhhchh
Q 000316 997 IDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSC 1076 (1678)
Q Consensus 997 ~~~l~~i~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1076 (1678)
.|||+.||++|||+||+.|||||+++||..|. +|++..+ |+|+|+.+++++++||+|+|..+| |.||++.+
T Consensus 417 ~ecLm~IaalYgenFillQ~fP~~sdLI~lc~--KRisg~L------EgaiiSs~qil~~mipclsDa~iM-ehlqhiml 487 (1034)
T KOG4190|consen 417 EECLMEIAALYGENFILLQFFPFCSDLIELCH--KRISGQL------EGAIISSFQILELMIPCLSDAQIM-EHLQHIML 487 (1034)
T ss_pred HHHHHHHHHHhcchhhhhhhhHHHHHHHHHHh--hhccccc------chhhhhHHHHHHHhccccchHHHH-HHHHHHhh
Confidence 89999999999999999999999999999999 4888855 999999999999999999999999 88887755
Q ss_pred -----hhhhhhhccccchhHHHHHHHH--------HHHHHHHhchhhHHHhhh-HHHHHHHhhhcccccccccCCCC---
Q 000316 1077 -----LHVMVLMHTNLEITVLQVAAST--------LMAICQRIGPDLTALHVL-PHLKELFDELAFSQECSDESGSL--- 1139 (1678)
Q Consensus 1077 -----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~r~g~~~~~~~~~-~~l~~~f~~~~~~~~~~~~~~~~--- 1139 (1678)
|...+|+++|+.||+|++..+. |++|++|||.||||+|.+ |.|.+|| +.|++..+..+..-
T Consensus 488 daillpilrllsstnlvmpsgylg~~~ia~Kf~dai~ais~kiGsdmTReh~cQPllnpFf--LiFnkaf~ip~tD~acd 565 (1034)
T KOG4190|consen 488 DAILLPILRLLSSTNLVMPSGYLGEEFIAQKFCDAIHAISQKIGSDMTREHACQPLLNPFF--LIFNKAFEIPETDEACD 565 (1034)
T ss_pred hhhhhhHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHhcchhhHHHhcCccccchh--hhhhhhcCCCCcchhhh
Confidence 5555599999999999987754 899999999999999999 9999999 99998776543111
Q ss_pred CCCccCCCCCCC-cccccccc----hhhHHHHHHHHHhhhhHHHHHHHhhhhHHHHHHHHHhccCcccccCCCccccccc
Q 000316 1140 GGSLKVPKPKVD-GESQIESR----MDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISEEN 1214 (1678)
Q Consensus 1140 ~~~~~~~~~~~~-~~~~~~~~----~~~~~~~y~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1214 (1678)
-.++..-.|..+ |.++.|.+ ++||...|..|++.+|...|.+.|.+-.++ +..||+.+++...+. .
T Consensus 566 lanlsligga~qPera~eeL~dVfg~ela~~a~~~F~k~lGea~lkr~~~dl~Fl---i~~cheheqpngq~k------~ 636 (1034)
T KOG4190|consen 566 LANLSLIGGAKQPERAEEELFDVFGLELAEDAVDKFAKELGEAFLKRFCDDLAFL---IPFCHEHEQPNGQPK------A 636 (1034)
T ss_pred hcchhhcccccCchhhHHHHHhcccHHHHHHHHHHHHHHhchHHHHhhccChhhe---ehhhccccCCCCCCC------c
Confidence 122223344433 56666654 599999999999999999999999999998 899998777421111 1
Q ss_pred cccCccccCCCCccccCchhh-hhccCcccccccccccc-----ccCcccccccccccchhhhhhhccccccCCCCceEe
Q 000316 1215 ISAKRPLLNKGSTSQCNPAKL-LLNGVGWSIPQSQGSRS-----SKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWF 1288 (1678)
Q Consensus 1215 ~da~rf~~~~~~~~~~~p~q~-y~s~l~~~~~~s~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~ 1288 (1678)
.-|..+-....+..-.+--.. ..+.+|- +..+.|. ....+.+..+..+++.+..+|....-+ .||+
T Consensus 637 qiA~n~~sgqdvdsvdasce~faAnSfG~---~i~GNRL~~ar~n~elisdm~a~~Ldqmp~~~hlkGn~l-----A~W~ 708 (1034)
T KOG4190|consen 637 QIAHNPPSGQDVDSVDASCEAFAANSFGG---MISGNRLFSARANSELISDMSAGGLDQMPFCDHLKGNLL-----AVWC 708 (1034)
T ss_pred ccccCCCCccccccccchhhhhhhhcccc---eeecceeeeeccCCccchhhhhcCccccccccccccchH-----HHHH
Confidence 111111111111111111011 1222221 1222222 222345667778888888877654322 2333
Q ss_pred ecCCCCCCCCCeEEEEeCCCCEEEEeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCC-------
Q 000316 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT------- 1361 (1678)
Q Consensus 1289 fSpdg~~~~~~~LasgS~D~~v~lWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~------- 1361 (1678)
--. ....+++.-.+++...+..+.||+..|+.++--.+++.++++|. |+||++|.++
T Consensus 709 ~et------------s~~e~dt~~ln~~~irL~nf~GH~~~iRai~AidNENSFiSASk----DKTVKLWSik~EgD~~~ 772 (1034)
T KOG4190|consen 709 AET------------SAAECDTDNLNFDHIRLCNFTGHQEKIRAIAAIDNENSFISASK----DKTVKLWSIKPEGDEIG 772 (1034)
T ss_pred hhh------------hHhhcCCcccccceeeeecccCcHHHhHHHHhcccccceeeccC----CceEEEEEeccccCccc
Confidence 100 00011122244555678899999999999999999999999998 9999999974
Q ss_pred CCeEEEEEecCCccEEEEeecCCCCcEEeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCC
Q 000316 1362 RINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNT 1441 (1678)
Q Consensus 1362 tg~~l~~l~gH~~~V~sV~fs~~~~~laS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~ 1441 (1678)
|..|..+++.|+.+|+++.|..+.+.++||||.|++||..-|+.+......... +
T Consensus 773 tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk~-------------------------~ 827 (1034)
T KOG4190|consen 773 TSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPKE-------------------------G 827 (1034)
T ss_pred cceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCccc-------------------------C
Confidence 446889999999999999999999999999999999999888776533221100 0
Q ss_pred CCCCeEEeeecCCceeEeEeecCCCEEEE-EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcc
Q 000316 1442 LSSGILSTAFDGNLYTCLHHIECVERLVV-GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGA 1520 (1678)
Q Consensus 1442 ~s~~v~sv~f~~~~vt~va~sp~g~~Las-gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~ 1520 (1678)
..+.|.++.-- +...+++ ++...||+++|.+.++.+..|+..... +-...+++++..
T Consensus 828 a~~~ikcl~nv-----------~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~-~Pna~~R~iaVa---------- 885 (1034)
T KOG4190|consen 828 AGGNIKCLENV-----------DRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP-GPNALTRAIAVA---------- 885 (1034)
T ss_pred CCceeEecccC-----------cchheeeeccchhhheeeecccccceeeEEeccCC-CCchheeEEEec----------
Confidence 01111111110 1234444 478899999999999999988865433 234678888864
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEE-EEcCCCCCCCCeEeecCCCC
Q 000316 1521 VASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRI-WDLRRNWPSQPTVFKGHTNG 1599 (1678)
Q Consensus 1521 ~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~I-WDl~~~~~~~~~~l~gH~~~ 1599 (1678)
+.|+++|+|-++|.|.+.|.|+|+.+..|+.-.-....++.|.++.|++...|.++.| |...++ ......+....+
T Consensus 886 -~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaapsdq~L~~saldHslaVnWhaldg--imh~q~kpppep 962 (1034)
T KOG4190|consen 886 -DKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAAPSDQALAQSALDHSLAVNWHALDG--IMHLQDKPPPEP 962 (1034)
T ss_pred -cCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcCchhHHHHhhcccceeEeeehhcCC--eeeeccCCCCcc
Confidence 5678999999999999999999999999998777777888888899999999999999 988776 333344544555
Q ss_pred EEEEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1600 ISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1600 V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
..-+..-|.-|+++.... ++||-=+... +.--..+|+.. ....++.++++..|-++.++.|++.|.|++.|
T Consensus 963 ahflqsvgpSLV~a~~Gn~lgVYad~a~~----ha~stitKiR~----d~f~G~lTala~LPLN~afLaGne~G~IaLlC 1034 (1034)
T KOG4190|consen 963 AHFLQSVGPSLVTAQNGNILGVYADSAEL----HAESTITKIRP----DEFPGTLTALAPLPLNCAFLAGNEHGAIALLC 1034 (1034)
T ss_pred hhhhhccCceeEEeccCcEEEEEecchhh----hhhhhhccccc----cccCCccceeeeccccchhhccCCCCceeecC
Confidence 444555677888877666 9998732111 11012234433 34778999999999999999999999999987
|
|
| >cd06071 Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-66 Score=586.27 Aligned_cols=233 Identities=40% Similarity=0.664 Sum_probs=204.6
Q ss_pred ccccccCccchhhhHhhhccccCCCCCCCcCCcccceEe-cCCCC-CCCCCCCcCccCCcchhhhcccccchh-cc----
Q 000316 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQLD-FT---- 442 (1678)
Q Consensus 370 ~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~~~-~~---- 442 (1678)
++.|..|+||||||||.||.++||+|+|++||||||||+ ||.++ .|++++..||||+||||++++++.+.. ..
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~sGRSf~D~sqYPIfPWvi~dy~s~~ldl~~~~~~RDLskpigal~~~r~~~~~~~~~~~ 80 (275)
T cd06071 1 TKKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKPIGALNKERLQLLKERYESD 80 (275)
T ss_pred CchhhcCCccHHHHHHHHHHHhCCCCCCcccCCccCeeecCCCCcccccCCcccccCCCCchhhcCHHHHHHHHHHHhhh
Confidence 478999999999999999999999999999999999999 78765 589999999999999999998766543 22
Q ss_pred cCCCCCCcccCccccCcceeeeeecccCchhHHHHHhhccc--CCCCccchHHHh----hc--CCCcccccccccCCccc
Q 000316 443 YSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY--EPNEYPSTMQRL----YQ--WTPDECIPEFYCDPQIF 514 (1678)
Q Consensus 443 ~~~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~--~~~~~~~~~~~~----~~--~~~~EliPeff~~p~~~ 514 (1678)
....+.|+||+++|+++++|++||+|++|||.+++.+++++ .+++.+.++... .. ++++|||||||++||||
T Consensus 81 ~~~~~~~~~y~shyS~~~~V~~yLvR~ePft~~~~~lq~g~fd~~~RlF~si~~~~~~~~~~~~d~~ELIPEFf~~Pe~f 160 (275)
T cd06071 81 SDDSDPPFHYGSHYSNPAIVLYYLVRLEPFTTLHLSLQGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFF 160 (275)
T ss_pred cccCCCCCCCCCCCCCHHHHHHHHhHcCCccHHHHHHhcCCcCCcccchhhHHHHHHHHHccCCCcccCCchHhcCHHHH
Confidence 23456889999999999999999999999999999888764 346665555444 33 78999999999999999
Q ss_pred ccCCC---------CCCCeecCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCCCCc
Q 000316 515 YSQHP---------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTK 585 (1678)
Q Consensus 515 ~~~~~---------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~Nv~~~~~~~~~ 585 (1678)
+|.|. .|+||+||+||++|++||++||+||||+|||+|||+||||||||||+|++|++|+|||+|.+++..
T Consensus 161 ~N~n~~~lg~~~g~~~~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~ 240 (275)
T cd06071 161 LNINKFDFGKQDGEKVNDVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTYEGS 240 (275)
T ss_pred hCCCcccccccCCCcccceecCCCcCCHHHHHHHHHHHHcccHhhhhhhhhhhhhcccccCCHHHHHhcCCCcccccCCc
Confidence 99763 389999999999999999999999999999999999999999999999999999999999887531
Q ss_pred ----------------ccccC--cCcccCCCCCCC
Q 000316 586 ----------------PKSVG--RLQLFTQPHPVR 602 (1678)
Q Consensus 586 ----------------~~~~g--~~qlf~~pHp~r 602 (1678)
...+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 275 (275)
T cd06071 241 VDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275 (275)
T ss_pred cccchhhHHHHHHHHHHHhcCCCcchhccCCCCCC
Confidence 23355 899999999998
|
This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins. |
| >PF02138 Beach: Beige/BEACH domain; InterPro: IPR000409 The BEACH domain is found in eukaryotic proteins that have diverse cellular functions ranging from lysosomal traffic to apoptosis and cytokinesisin vesicle trafficking, membrane dynamics, and receptor signaling | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-64 Score=575.30 Aligned_cols=233 Identities=41% Similarity=0.673 Sum_probs=159.7
Q ss_pred ccccccCccchhhhHhhhccccCCCCCCCcCCcccceEe-cCCCC-CCCCCCCcCccCCcchhhhcccc-cchhcccC--
Q 000316 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGD-EQLDFTYS-- 444 (1678)
Q Consensus 370 ~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~-~~~~~~~~-- 444 (1678)
+++|..|+||||+|||.||.+|||+|+|++||||||||+ ||.++ .|++++..||||+||||++++.. +.++..|.
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~aGRSf~D~sqYPIFPWv~~dy~s~~ldl~~~~~~RdLskPiga~~~~r~~~~~~~~~~~ 80 (270)
T PF02138_consen 1 TEKWQNGEISNFEYLMYLNILAGRSFNDLSQYPIFPWVISDYDSEELDLNDPSNYRDLSKPIGAQNEERLEKLKERYEEM 80 (270)
T ss_dssp HHHHHTTSS-HHHHHHHHHHHCT--TT-GGG---B---B---SSSS--TT-GGGB--TTS-HHHCSHHHHHHHHHHHHC-
T ss_pred CcchhcCCCcHHHHHHHHhHHhccCCCCCccCccccchhccCCccccccCCccccccccccccccCHHHHHHHHHHHHhh
Confidence 468999999999999999999999999999999999999 88765 68899999999999999886543 22333332
Q ss_pred -CCCCCcccCccccCcceeeeeecccCchhHHHHHhhccc--CCCCccchHHHhhcC------CCcccccccccCCcccc
Q 000316 445 -SSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY--EPNEYPSTMQRLYQW------TPDECIPEFYCDPQIFY 515 (1678)
Q Consensus 445 -~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~--~~~~~~~~~~~~~~~------~~~EliPeff~~p~~~~ 515 (1678)
..+.|+||+++|+++++|++||+|++|||.+++.++++. .+++.+.++.+.+.+ +++|||||||++||||+
T Consensus 81 ~~~~~~~~y~s~ys~~~~v~~~L~R~ePft~l~~~lq~g~fD~~~r~F~SI~~~~~~~~~~~~d~~EliPEff~~Pe~f~ 160 (270)
T PF02138_consen 81 EEFEPPFHYGSHYSSPGTVLYYLVRLEPFTSLHIDLQSGKFDVPDRLFSSIEDTWNSVTENMNDVKELIPEFFYLPEFFK 160 (270)
T ss_dssp -SSS---SBSS-SS-HHHHHHHTTTSTTHHHHHHHCCTTS---CCCSS-BHHHHHHHHHH-TT----B-GGGGT-GGGGS
T ss_pred hccCCCccccCCCCCcchhhhhhcccChHHHHHHHHhccccCCchHHHHHHHHHHHHhhcCCccccccChhhhCCHHHhc
Confidence 234789999999999999999999999999999998763 688999889888754 57999999999999999
Q ss_pred cCCC-------CCCCeecCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCCCCcc--
Q 000316 516 SQHP-------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP-- 586 (1678)
Q Consensus 516 ~~~~-------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~Nv~~~~~~~~~~-- 586 (1678)
|.+. .|+||+||+||++|++||++||+||||+|||++||+||||||||||+|++|++|+|||+|.+++...
T Consensus 161 N~n~~~~g~~~~~~dV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~~~~ 240 (270)
T PF02138_consen 161 NINNFDLGKGEDVDDVELPPWAKSPFEFVYKHRKALESDYVSQNLHHWIDLIFGYKQRGKEAVEAKNVFHPLTYEDSWIE 240 (270)
T ss_dssp -TT-SS--BS-B-SS-B--TT-SSHHHHHHHHHHHHCSHHHHTTHHHHHHHHTSCCCSCHHHHHTT--B-CCCSTTS---
T ss_pred ccccccccCCCccceeecCCccchHHHHHHHHHHHHhhhHHHhhhhHHHHHhhCcccccHHHHHHhhcccccCCCccccC
Confidence 9865 6899999999999999999999999999999999999999999999999999999999999987543
Q ss_pred ------------cccC--cCcccCCCCCCC
Q 000316 587 ------------KSVG--RLQLFTQPHPVR 602 (1678)
Q Consensus 587 ------------~~~g--~~qlf~~pHp~r 602 (1678)
..+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 270 (270)
T PF02138_consen 241 DPMEREAIEAQLKNFGQVPIQLFTKPHPKR 270 (270)
T ss_dssp SHHHHHHHHHHHHHC--------SS-----
T ss_pred CHHHHHHHHHHHHhcCCChHHHhCCCCCCC
Confidence 4567 789999999998
|
The name BEACH is derived from beige and Chediak-Higashi syndrome (CHS). CHS is a rare, autosomal recessive disorder that can cause severe immunodeficiency and albinism in humans and other mammals, and beige is the name for the CHS disease in mice [, ]. The BEACH domain was first described in the lysosomal-trafficking regulators Beige protein and its human homologue CHS protein Q99698 from SWISSPROT. It is also found in distantly related proteins like, for example, the FAN proteins O35242 from SWISSPROT and Q92636 from SWISSPROT which are factor associated with neutral sphingomyelinase activation []. It has also been described in Dictyostelium proteins Lvs []. The BEACH domain is usually followed by a series of WD repeats (PDOC00574 from PROSITEDOC). The function of the BEACH domain is unknown.; PDB: 1MI1_B 1T77_C. |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=500.97 Aligned_cols=293 Identities=19% Similarity=0.234 Sum_probs=223.9
Q ss_pred eccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC----e----EEEEEecCCccEEEEeecCC-CCcEE--eC
Q 000316 1323 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI----N----CVSGYYGHEEVVNDICVLSS-SGRIA--SC 1391 (1678)
Q Consensus 1323 l~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg----~----~l~~l~gH~~~V~sV~fs~~-~~~la--S~ 1391 (1678)
+.+|.+.|.+++|+|+|++++|||. |++|+|||+.+. . ....+. +...|.+++|++. +..++ +.
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~----D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~ 553 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGV----NKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNF 553 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeC----CCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeC
Confidence 4569999999999999999999997 999999997542 1 223333 4568999999875 45564 44
Q ss_pred CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeec-CCCEEEE
Q 000316 1392 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVV 1470 (1678)
Q Consensus 1392 DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp-~g~~Las 1470 (1678)
||+|++||+.+++.+..+..|. +. +++++++| ++..|++
T Consensus 554 Dg~v~lWd~~~~~~~~~~~~H~------------------------------~~----------V~~l~~~p~~~~~L~S 593 (793)
T PLN00181 554 EGVVQVWDVARSQLVTEMKEHE------------------------------KR----------VWSIDYSSADPTLLAS 593 (793)
T ss_pred CCeEEEEECCCCeEEEEecCCC------------------------------CC----------EEEEEEcCCCCCEEEE
Confidence 9999999999988877776542 23 44455553 6789999
Q ss_pred EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc-EEEE
Q 000316 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-VIAS 1549 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~-~i~~ 1549 (1678)
|+.|++|++||++++..+..+..+ ..|.+++|.+ ++|.++++|+.||.|++||+++++ .+..
T Consensus 594 gs~Dg~v~iWd~~~~~~~~~~~~~-------~~v~~v~~~~----------~~g~~latgs~dg~I~iwD~~~~~~~~~~ 656 (793)
T PLN00181 594 GSDDGSVKLWSINQGVSIGTIKTK-------ANICCVQFPS----------ESGRSLAFGSADHKVYYYDLRNPKLPLCT 656 (793)
T ss_pred EcCCCEEEEEECCCCcEEEEEecC-------CCeEEEEEeC----------CCCCEEEEEeCCCeEEEEECCCCCccceE
Confidence 999999999999999988877642 2366777642 346899999999999999999876 5778
Q ss_pred EeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCC----CCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEe
Q 000316 1550 WRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNW----PSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1550 l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~----~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwd 1622 (1678)
+.+|...|+++...++.+|+|+|.|++|++||++.+. ...+..+.+|...+. +|++++++|++|+.|+ |.+|+
T Consensus 657 ~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 657 MIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred ecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 8899999999995588899999999999999997531 245678999998877 5999999999999999 99999
Q ss_pred cCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1623 LSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1623 l~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
......... ................+...|++++|+|++..|++|+.||+|+||+
T Consensus 737 ~~~~~~~~s-~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 737 KAFPMPVLS-YKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred CCCCCceEE-EecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEe
Confidence 642110000 0000000000000123567899999999999999999999999996
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-48 Score=418.52 Aligned_cols=149 Identities=23% Similarity=0.318 Sum_probs=137.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|..+++||+|+||+||+|++. ++|+.||||+++..+..+. +.++++|||+.|++++||||+.|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~------~t~~~VAIKKIkl~~~kdG--------i~~talREIK~Lqel~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDT------ETGKRVAIKKIKLGNAKDG--------INRTALREIKLLQELKHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEec------CCCcEEEEEEeeccccccC--------ccHHHHHHHHHHHHccCcchhhhh
Confidence 57999999999999999999975 6899999999987644432 234566999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++|...+.+.||+||++.||+.+|+ ++...++..+++.|+.|+++||+|||+++|+||||||.|+||+++| .+||+|
T Consensus 68 D~F~~~~~l~lVfEfm~tdLe~vIk-d~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g--~lKiAD 144 (318)
T KOG0659|consen 68 DVFPHKSNLSLVFEFMPTDLEVVIK-DKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG--QLKIAD 144 (318)
T ss_pred hhccCCCceEEEEEeccccHHHHhc-ccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC--cEEeec
Confidence 9999999999999999999999999 5678899999999999999999999999999999999999999999 999999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+||.
T Consensus 145 FGLAr~ 150 (318)
T KOG0659|consen 145 FGLARF 150 (318)
T ss_pred ccchhc
Confidence 999995
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-45 Score=411.70 Aligned_cols=331 Identities=17% Similarity=0.283 Sum_probs=284.3
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~D 1352 (1678)
+++..||.+.|.+ |||+|.. |+|||+|.++|+||+. .....+.+||.+.|.||+|+|||+.||||+. |
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~-----l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~----d 178 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSR-----LVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSK----D 178 (480)
T ss_pred ccccCCCCCcEEEEEecCCCce-----EEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcccc----C
Confidence 5678899999987 9999997 9999999999999998 6789999999999999999999999999998 8
Q ss_pred CeEEEEeCCCCeEE-EEEecCCccEEEEeecC-----CCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCC
Q 000316 1353 GTVQKWELTRINCV-SGYYGHEEVVNDICVLS-----SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1678)
Q Consensus 1353 gtVrlWDl~tg~~l-~~l~gH~~~V~sV~fs~-----~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~ 1424 (1678)
|+|++||.++|+++ ..+.||...|++++|.| ..+++||+ ||+|+|||+..++++..+.+|.
T Consensus 179 g~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT----------- 247 (480)
T KOG0271|consen 179 GSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHT----------- 247 (480)
T ss_pred CeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCc-----------
Confidence 99999999999876 57999999999999964 45667665 9999999999999998887663
Q ss_pred CccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcc
Q 000316 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V 1504 (1678)
..|.++.|.+ ..++++||.|++||+|+..+|.+.+++++|. .+|
T Consensus 248 -------------------~~VTCvrwGG-----------~gliySgS~DrtIkvw~a~dG~~~r~lkGHa------hwv 291 (480)
T KOG0271|consen 248 -------------------ASVTCVRWGG-----------EGLIYSGSQDRTIKVWRALDGKLCRELKGHA------HWV 291 (480)
T ss_pred -------------------cceEEEEEcC-----------CceEEecCCCceEEEEEccchhHHHhhcccc------hhe
Confidence 3345555543 3589999999999999999999999999754 457
Q ss_pred eEEEeeCCCc-----cccCcccC--------------------CCCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCCeE
Q 000316 1505 SAICACGSEK-----MQAGGAVA--------------------SPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVT 1558 (1678)
Q Consensus 1505 ~sva~~~~~~-----~s~dg~~p--------------------~g~~LasGs~Dg~I~lWD~~tg-~~i~~l~gH~~~V~ 1558 (1678)
+.++.+.... |.+.+..+ .|..+++||+|+++.+|+.... +++....||..-|+
T Consensus 292 N~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn 371 (480)
T KOG0271|consen 292 NHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVN 371 (480)
T ss_pred eeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhhee
Confidence 7777663322 22323221 2457999999999999998754 58888999999999
Q ss_pred EEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCcce
Q 000316 1559 KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHR 1634 (1678)
Q Consensus 1559 sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~ 1634 (1678)
.|. +||++++||+|.|++|++||.++| +.+.+|+||.+.|+ +||.|.++|+|||.|. +++|++.
T Consensus 372 ~V~fSPd~r~IASaSFDkSVkLW~g~tG--k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~---------- 439 (480)
T KOG0271|consen 372 HVSFSPDGRYIASASFDKSVKLWDGRTG--KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVR---------- 439 (480)
T ss_pred eEEECCCccEEEEeecccceeeeeCCCc--chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEee----------
Confidence 999 999999999999999999999999 77889999999999 6999999999999999 9999975
Q ss_pred eccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1635 LVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1635 ~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
..++..... +|...|.+++|+|||..+++|+.|..+++|-
T Consensus 440 --tkKl~~DLp--Gh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 440 --TKKLKQDLP--GHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred --eeeecccCC--CCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 234444444 4899999999999999999999999999993
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-46 Score=412.04 Aligned_cols=158 Identities=23% Similarity=0.198 Sum_probs=143.2
Q ss_pred ccccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCC
Q 000316 155 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH 234 (1678)
Q Consensus 155 ~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~H 234 (1678)
+..++.++.|+++.+|++|+||+||+|+++ .++.+||+|+++..+... -++++++|||.+|.+++|
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk------~t~eIVALKr~kmekek~--------GFPItsLREIniLl~~~H 134 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDK------KTDEIVALKRLKMEKEKE--------GFPITSLREINILLKARH 134 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccC------CcceeEEeeecccccccC--------CCcchhHHHHHHHHhcCC
Confidence 667888999999999999999999999976 688999999998765332 267788999999999999
Q ss_pred CcccceeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 235 PNVAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 235 pNIV~l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
||||.+.++.... +.+|||||||+.||..++... ..+|...+++.++.|+++||+|||.++|+||||||+|+|++..
T Consensus 135 ~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m-~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 135 PNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETM-KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK 213 (419)
T ss_pred CCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC
Confidence 9999999998765 479999999999999999964 4679999999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCcccCC
Q 000316 313 CWSWLYICDKPLVGFNS 329 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~ 329 (1678)
| .+||||||+||...
T Consensus 214 G--~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 214 G--ILKIADFGLAREYG 228 (419)
T ss_pred C--cEEecccchhhhhc
Confidence 9 89999999999544
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-44 Score=421.97 Aligned_cols=156 Identities=24% Similarity=0.290 Sum_probs=138.7
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN 236 (1678)
..+..+.|+.+++||+|+||.||+|++. .+|++||+|++..+.....- .+.++|||.||++|+|||
T Consensus 112 ~~r~~~~feki~kIGeGTyg~VYkAr~~------~tgkivALKKvr~d~~~~~~--------~~t~~REI~ILr~l~HpN 177 (560)
T KOG0600|consen 112 GPRRADSFEKIEKIGEGTYGQVYKARDL------ETGKIVALKKVRFDNEKEGF--------PITAIREIKILRRLDHPN 177 (560)
T ss_pred cccchHHHHHHHHhcCcchhheeEeeec------ccCcEEEEEEeecccCCCcc--------hHHHHHHHHHHHhcCCCc
Confidence 3445678999999999999999999965 78999999999876544332 234459999999999999
Q ss_pred ccceeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 237 VAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 237 IV~l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
||+|.+...+. ..+|||+|||+.||..++. ++...|++.+++.||+||+.||+|||++||+|||||.+|||||.+|
T Consensus 178 IikL~eivt~~~~~siYlVFeYMdhDL~GLl~-~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G- 255 (560)
T KOG0600|consen 178 IIKLEEIVTSKLSGSIYLVFEYMDHDLSGLLS-SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG- 255 (560)
T ss_pred ccceeeEEEecCCceEEEEEecccchhhhhhc-CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC-
Confidence 99999998876 6899999999999999998 4667899999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCC
Q 000316 315 SWLYICDKPLVGFNS 329 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~ 329 (1678)
.+||+|||||++..
T Consensus 256 -~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 256 -VLKIADFGLARFYT 269 (560)
T ss_pred -CEEeccccceeecc
Confidence 99999999999654
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-44 Score=398.17 Aligned_cols=152 Identities=21% Similarity=0.305 Sum_probs=134.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+.+.++|+|+||+||+|+++ .+|++||||++...... ...++. |+|||++|++++|||+|.|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk------~TgqIVAIKkF~Esedd-~~VkKI-------AlREIrmLKqLkH~NLVnL 66 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNK------DTGQIVAIKKFVESEDD-PVVKKI-------ALREIRMLKQLKHENLVNL 66 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccC------CcccEEEEEeeccCCcc-HHHHHH-------HHHHHHHHHhcccchHHHH
Confidence 468999999999999999999976 78999999999764332 333333 3599999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++|.....+++|+|||+.++.+.+...+++ +++..++.|++|++.|+.|||+++|||||||||||||+.+| .+|||
T Consensus 67 iEVFrrkrklhLVFE~~dhTvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g--vvKLC 143 (396)
T KOG0593|consen 67 IEVFRRKRKLHLVFEYCDHTVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG--VVKLC 143 (396)
T ss_pred HHHHHhcceeEEEeeecchHHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC--cEEec
Confidence 9999999999999999999888888765554 78999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCC
Q 000316 321 DKPLVGFNS 329 (1678)
Q Consensus 321 DFGlA~~~~ 329 (1678)
|||+||...
T Consensus 144 DFGFAR~L~ 152 (396)
T KOG0593|consen 144 DFGFARTLS 152 (396)
T ss_pred cchhhHhhc
Confidence 999999543
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-44 Score=406.29 Aligned_cols=178 Identities=20% Similarity=0.223 Sum_probs=149.7
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH--HHHHHhcCCCchhHHHhhccCCCCcc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES--KNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~--~~~l~~~~~~~~~Ei~iL~~l~HpNI 237 (1678)
..+.|.+.+.||+|+||.|-+|..+ .+|+.||||++.+.+...... .... ...+|+++|++|+||||
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~------~tgk~vAiKIi~krk~~~~s~~~~~~~-----~v~~EieILkkL~HP~I 238 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEK------KTGKQVAIKIINKRKSTGCSRAIAKTR-----DVQNEIEILKKLSHPNI 238 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEc------ccCcEEEeeeeehhhcccccccccchh-----hhHHHHHHHHhcCCCCE
Confidence 4667999999999999999999975 689999999999876554221 1111 12399999999999999
Q ss_pred cceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC-ce
Q 000316 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC-WS 315 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g-~~ 315 (1678)
|+++++|...+..||||||++| +|.+.+- .++.+.+...+.+++|++.||.|||++||+||||||+|||++.+. ..
T Consensus 239 V~~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~ 316 (475)
T KOG0615|consen 239 VRIKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDC 316 (475)
T ss_pred EEEeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcce
Confidence 9999999999999999999995 9999998 577889999999999999999999999999999999999998772 13
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
.+||+|||+|+.... ..-.++-| |||.|.|||++.
T Consensus 317 llKItDFGlAK~~g~------~sfm~TlC------GTpsYvAPEVl~ 351 (475)
T KOG0615|consen 317 LLKITDFGLAKVSGE------GSFMKTLC------GTPSYVAPEVLA 351 (475)
T ss_pred EEEecccchhhcccc------ceehhhhc------CCccccChhhee
Confidence 899999999997542 12223334 899999999974
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-44 Score=412.39 Aligned_cols=175 Identities=21% Similarity=0.238 Sum_probs=149.6
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CC
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HP 235 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-Hp 235 (1678)
....+++|.++++||.|+||.||+|+.. +++..||||.+++.-.. ..+.++ +||++.|++|+ ||
T Consensus 5 ~~~~m~RY~~i~klGDGTfGsV~la~~~------~~~~~VAIK~MK~Kf~s---~ee~~n------LREvksL~kln~hp 69 (538)
T KOG0661|consen 5 QVIFMDRYTVIRKLGDGTFGSVYLAKSK------ETGELVAIKKMKKKFYS---WEECMN------LREVKSLRKLNPHP 69 (538)
T ss_pred ehhHHHHHHHHHHhcCCcceeEEEeeec------CCCceeeHHHHHhhhcc---HHHHHH------HHHHHHHHhcCCCC
Confidence 3445789999999999999999999954 67888999999875433 233433 39999999998 99
Q ss_pred cccceeeEEEeCC-eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~-~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
|||+|.+++.+.+ .+|+|||||+.+|+++++. ++..|++..++.|++||++||+|+|++|+.||||||||||+..+.
T Consensus 70 niikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~-R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~- 147 (538)
T KOG0661|consen 70 NIIKLKEVIRDNDRILYFVFEFMDCNLYQLMKD-RNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGND- 147 (538)
T ss_pred cchhhHHHhhccCceEeeeHHhhhhhHHHHHhh-cCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccc-
Confidence 9999999999988 9999999999999999995 488899999999999999999999999999999999999999766
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
.|||+|||+||..... .+ -+.+++|.+|+|||++
T Consensus 148 -~iKiaDFGLARev~Sk-------pP-----YTeYVSTRWYRAPEvL 181 (538)
T KOG0661|consen 148 -VIKIADFGLAREVRSK-------PP-----YTEYVSTRWYRAPEVL 181 (538)
T ss_pred -eeEecccccccccccC-------CC-----cchhhhcccccchHHh
Confidence 7999999999965421 11 1345677888888775
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=394.12 Aligned_cols=175 Identities=21% Similarity=0.319 Sum_probs=141.4
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
....|..++.||+|+||.|..|.++ .+|..||||++...-......++ ++||+++|+.++|+|||.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~------~t~~~VAIKKi~~~F~~~~~akR--------tlRElklLr~~~HeNIi~ 85 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDK------RTGEKVAIKKILNPFENQIDAKR--------TLRELKLLRHLRHENIIG 85 (359)
T ss_pred ccceecccccccCcceeeEEEEEEc------CCCCEeehhhhhhhhhchHHHHH--------HHHHHHHHHHhcCCCcce
Confidence 3456777999999999999999976 57899999998632222222233 349999999999999999
Q ss_pred eeeEEEe-----CCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 240 VLGLLKT-----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 240 l~~~~~~-----~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+++++.. -..+|+|+|+|+.||.++|+ .+..+++.+++++++||++||.|+|+.+|+||||||.|+|++.+.
T Consensus 86 l~di~~p~~~~~f~DvYiV~elMetDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c- 162 (359)
T KOG0660|consen 86 LLDIFRPPSRDKFNDVYLVFELMETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC- 162 (359)
T ss_pred EEeecccccccccceeEEehhHHhhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC-
Confidence 9999976 23799999999999999999 455699999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
.+||||||+||..... ......+.++.|.+|+|||++
T Consensus 163 -~lKI~DFGLAR~~~~~---------~~~~~mTeYVaTRWYRAPEll 199 (359)
T KOG0660|consen 163 -DLKICDFGLARYLDKF---------FEDGFMTEYVATRWYRAPELL 199 (359)
T ss_pred -CEEeccccceeecccc---------CcccchhcceeeeeecCHHHH
Confidence 8999999999965421 001123445556666666653
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=390.64 Aligned_cols=174 Identities=19% Similarity=0.223 Sum_probs=154.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+++.+ .+++++|+|++++.+.......+... +|..||..++||+||++
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~------dt~kiYAmKvl~K~~iv~~~e~~~~~-------~Er~IL~~v~hPFiv~l 90 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKK------DTGKIYAMKVLKKKKIVEKKEVRHTK-------AERNILSKIKHPFIVKL 90 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEc------ccCceeehhhhhhhHhhhhhhHHHHH-------HHHHHHHhCCCCcEeee
Confidence 678999999999999999999964 68999999999998877765555553 99999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+..|++.+.+|+|+||+.| +|...|+ +.+.++|..+++|+.+|+.||.|||++||||||||||||||+.+| +++|
T Consensus 91 ~ysFQt~~kLylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--Hi~L 166 (357)
T KOG0598|consen 91 IYSFQTEEKLYLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--HIKL 166 (357)
T ss_pred EEecccCCeEEEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--cEEE
Confidence 9999999999999999995 9999998 688899999999999999999999999999999999999999999 9999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+|||+|+...... ....+-| ||+.|||||++.
T Consensus 167 tDFgL~k~~~~~~-----~~t~tfc------GT~eYmAPEil~ 198 (357)
T KOG0598|consen 167 TDFGLCKEDLKDG-----DATRTFC------GTPEYMAPEILL 198 (357)
T ss_pred eccccchhcccCC-----Ccccccc------CCccccChHHHh
Confidence 9999999654221 1122223 899999999864
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=407.96 Aligned_cols=173 Identities=18% Similarity=0.239 Sum_probs=153.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|+..+.||+|+|+.||++++. .+|..||+|++.+........++-+. +||+|.+.|+|||||+++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~------~tge~~A~KvVpk~~l~k~~~reKv~-------~EIeIHr~L~HpnIV~f~ 84 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDL------DTGEVVAVKVVPKKLLKKPKQREKVL-------NEIEIHRSLKHPNIVQFY 84 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEc------CCCcEEEEEEeehHHhcCcchHHHHH-------HHHHHHHhcCCCcEEeee
Confidence 67999999999999999999964 68999999999886665555555554 999999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++|++.+++|||+|+|+ ++|..+++ +++.++|.+++++++||+.||.|||+++|||||||..||+++++. +|||+
T Consensus 85 ~~FEDs~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~--~VKIg 160 (592)
T KOG0575|consen 85 HFFEDSNNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM--NVKIG 160 (592)
T ss_pred eEeecCCceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC--cEEec
Confidence 99999999999999999 69999998 678899999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
|||||....... ...++-| |||-|.|||++.
T Consensus 161 DFGLAt~le~~~-----Erk~TlC------GTPNYIAPEVl~ 191 (592)
T KOG0575|consen 161 DFGLATQLEYDG-----ERKKTLC------GTPNYIAPEVLN 191 (592)
T ss_pred ccceeeeecCcc-----cccceec------CCCcccChhHhc
Confidence 999999766332 2233444 899999999863
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=366.47 Aligned_cols=290 Identities=23% Similarity=0.314 Sum_probs=253.2
Q ss_pred CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCc
Q 000316 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1394 (1678)
Q Consensus 1317 ~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--Dgt 1394 (1678)
..|-.++.||.++|.|++|+|+|..|+|||. |.|||+||+.|..+..+.+||...|.||+|+||+..+||+ ||+
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsG----D~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~ 180 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSG----DTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGS 180 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCC----CceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCe
Confidence 4577889999999999999999999999997 9999999999999999999999999999999999999776 999
Q ss_pred EEEEECCCCceeE-EecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEEC
Q 000316 1395 LHVWNSQTGKLLS-VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1473 (1678)
Q Consensus 1395 VrIWD~~tg~~~~-~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~ 1473 (1678)
|++||.++|+++. .+. +|..+|.+++|.|- ...|..+.+++++.
T Consensus 181 I~lwdpktg~~~g~~l~------------------------------gH~K~It~Lawep~-----hl~p~~r~las~sk 225 (480)
T KOG0271|consen 181 IRLWDPKTGQQIGRALR------------------------------GHKKWITALAWEPL-----HLVPPCRRLASSSK 225 (480)
T ss_pred EEEecCCCCCccccccc------------------------------CcccceeEEeeccc-----ccCCCccceecccC
Confidence 9999999998753 233 45678889999874 34567789999999
Q ss_pred CCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 000316 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1553 (1678)
Q Consensus 1474 DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH 1553 (1678)
||+|+|||+..+.++..+.+|+ ..|+||++.+. .++++||.|++|++|+...|.++..++||
T Consensus 226 Dg~vrIWd~~~~~~~~~lsgHT------~~VTCvrwGG~------------gliySgS~DrtIkvw~a~dG~~~r~lkGH 287 (480)
T KOG0271|consen 226 DGSVRIWDTKLGTCVRTLSGHT------ASVTCVRWGGE------------GLIYSGSQDRTIKVWRALDGKLCRELKGH 287 (480)
T ss_pred CCCEEEEEccCceEEEEeccCc------cceEEEEEcCC------------ceEEecCCCceEEEEEccchhHHHhhccc
Confidence 9999999999999999998654 45899998642 48999999999999999999999999999
Q ss_pred CCCeEEEE-cC-----------CC-------------------------CEEEEEeCCCcEEEEEcCCCCCCCCeEeecC
Q 000316 1554 DGYVTKLA-AP-----------ED-------------------------HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH 1596 (1678)
Q Consensus 1554 ~~~V~sva-sp-----------dg-------------------------~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH 1596 (1678)
..+|+.++ +. .+ ..|+|||.|.++.+|+....+ +++..+.||
T Consensus 288 ahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~k-kpi~rmtgH 366 (480)
T KOG0271|consen 288 AHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSK-KPITRMTGH 366 (480)
T ss_pred chheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccc-cchhhhhch
Confidence 99999998 51 12 359999999999999987763 566788999
Q ss_pred CCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCc
Q 000316 1597 TNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGY 1673 (1678)
Q Consensus 1597 ~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~ 1673 (1678)
..-|+ .||||++++||+|-|+ |++|+.. .|+. ....+ +|.+.|+.|+|+.|.|+|++||.|.+
T Consensus 367 q~lVn~V~fSPd~r~IASaSFDkSVkLW~g~-----tGk~-------lasfR--GHv~~VYqvawsaDsRLlVS~SkDsT 432 (480)
T KOG0271|consen 367 QALVNHVSFSPDGRYIASASFDKSVKLWDGR-----TGKF-------LASFR--GHVAAVYQVAWSADSRLLVSGSKDST 432 (480)
T ss_pred hhheeeEEECCCccEEEEeecccceeeeeCC-----Ccch-------hhhhh--hccceeEEEEeccCccEEEEcCCCce
Confidence 99999 5999999999999999 9999953 3332 22223 49999999999999999999999999
Q ss_pred EEEcC
Q 000316 1674 LRLCC 1678 (1678)
Q Consensus 1674 IrIwd 1678 (1678)
+++|+
T Consensus 433 LKvw~ 437 (480)
T KOG0271|consen 433 LKVWD 437 (480)
T ss_pred EEEEE
Confidence 99996
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=376.59 Aligned_cols=146 Identities=25% Similarity=0.370 Sum_probs=128.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|+-.+.+|.|+||.||+|... ++...||||++..++.... +|+++|+.++|||||+|..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~------e~~~~vAIKKv~~d~r~kn--------------rEl~im~~l~HpNIV~L~~ 84 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLR------ETEEEVAIKKVLQDKRYKN--------------RELQIMRKLDHPNIVRLLY 84 (364)
T ss_pred EEEeeEEEeecccceEEEEEEc------CCCceeEEEEecCCCCcCc--------------HHHHHHHhcCCcCeeeEEE
Confidence 5889999999999999999954 5688999999987655433 8999999999999999999
Q ss_pred EEEeCC-----eEEEeccCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 243 LLKTSG-----LITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 243 ~~~~~~-----~~~lVmEy~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+|.... .+.+||||||.+|.++++. ..+..++.-+++.|++||++||.|||+.||+||||||+|||+|.+. +
T Consensus 85 ~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~t-g 163 (364)
T KOG0658|consen 85 FFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDT-G 163 (364)
T ss_pred EEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCC-C
Confidence 987432 5679999999999999984 2356789999999999999999999999999999999999999884 2
Q ss_pred eEEEEecCCcccCC
Q 000316 316 WLYICDKPLVGFNS 329 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~ 329 (1678)
.+||||||.|+...
T Consensus 164 ~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 164 VLKICDFGSAKVLV 177 (364)
T ss_pred eEEeccCCcceeec
Confidence 99999999999644
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=376.53 Aligned_cols=152 Identities=22% Similarity=0.246 Sum_probs=135.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc-ccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN-VAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN-IV~ 239 (1678)
+..|+.+++||+|+||+||+|+++ .+|..||+|+++.....+. .+.+++||+.+|+.|+|+| ||+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~------~~g~~VALKkirl~~~~EG--------~P~taiREisllk~L~~~~~iv~ 75 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSK------RTGKFVALKKIRLEFEEEG--------VPSTAIREISLLKRLSHANHIVR 75 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEe------cCCCEEEEEEEeccccccC--------CCchhhHHHHHHHHhCCCcceEE
Confidence 567999999999999999999976 5789999999987543311 3556789999999999999 999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPN--ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~--~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
|++++.+.+ .+++||||++.+|..++...+. ..++...++.+++||+.||+|||++||+||||||+||||++
T Consensus 76 L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 76 LHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS 155 (323)
T ss_pred EEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC
Confidence 999999887 8999999999999999996443 35788899999999999999999999999999999999999
Q ss_pred CCceeEEEEecCCcccC
Q 000316 312 SCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~ 328 (1678)
+| .+||+|||+|+..
T Consensus 156 ~G--~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 156 SG--VLKLADFGLARAF 170 (323)
T ss_pred CC--cEeeeccchHHHh
Confidence 99 9999999999943
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=384.77 Aligned_cols=151 Identities=16% Similarity=0.221 Sum_probs=140.5
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||+||+|+.+ .+|.++|+|++++......+..+.++ .|..+|...++|+||+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk------~Tg~iyAmK~LkKS~M~~~~Qv~hV~-------aERdiL~~~ds~~vVK 205 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKK------DTGEIYAMKILKKSEMLKKNQVEHVR-------AERDILAEVDSPWVVK 205 (550)
T ss_pred CcccchhheeeccccceeEEEEEEc------cCCcEEeeecccHHHHHhhhhHHHHH-------HHHHHhhhcCCCcEEE
Confidence 4789999999999999999999954 68999999999987766666666665 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
||..|++.+++||||||++| |+..+|. +.+.+++..+++|+.+++.|++.+|+.|+|||||||+|+|||..| ++|
T Consensus 206 LyYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G--HiK 281 (550)
T KOG0605|consen 206 LYYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG--HIK 281 (550)
T ss_pred EEEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC--CEe
Confidence 99999999999999999995 9999998 678899999999999999999999999999999999999999999 999
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+||||++-
T Consensus 282 LSDFGLs~g 290 (550)
T KOG0605|consen 282 LSDFGLSTG 290 (550)
T ss_pred eccccccch
Confidence 999999964
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=332.50 Aligned_cols=149 Identities=21% Similarity=0.223 Sum_probs=134.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|...++||+|+||+||+|+++ .++++||+|.++.+...+. ++.+++|||.+|++++|.|||+++
T Consensus 2 ~~ydkmekigegtygtvfkarn~------~t~eivalkrvrlddddeg--------vpssalreicllkelkhknivrl~ 67 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNR------ETHEIVALKRVRLDDDDEG--------VPSSALREICLLKELKHKNIVRLH 67 (292)
T ss_pred cchHHHHhhcCCcceeeEecccC------CccceEEEEEEeccCCCCC--------CcHHHHHHHHHHHHhhhcceeehh
Confidence 46888999999999999999964 6899999999987644432 223356999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++...+..+.+|+|||..+|..+.. +-++.+..+.++.++.|+++||.|||+++++||||||.|+||+.+| .+|++|
T Consensus 68 dvlhsdkkltlvfe~cdqdlkkyfd-slng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng--elklad 144 (292)
T KOG0662|consen 68 DVLHSDKKLTLVFEFCDQDLKKYFD-SLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG--ELKLAD 144 (292)
T ss_pred hhhccCceeEEeHHHhhHHHHHHHH-hcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC--cEEecc
Confidence 9999999999999999999999998 4577789999999999999999999999999999999999999999 999999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+||.
T Consensus 145 fglara 150 (292)
T KOG0662|consen 145 FGLARA 150 (292)
T ss_pred cchhhh
Confidence 999984
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-39 Score=365.03 Aligned_cols=184 Identities=17% Similarity=0.242 Sum_probs=154.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+.+.++.||+|+.|+||+|+|+ .+++++|+|.+..+ ......++.+ +|++++++++|||||++
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk------~t~~i~AlK~I~~~-~~~~~~~Qi~--------rEl~il~~~~spyIV~~ 142 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHK------PTGKIYALKVILLN-IDPALQKQIL--------RELEILRSCQSPYIVGF 142 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEc------CCCeEEEEEeeccc-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 557889999999999999999986 68999999999543 3444445555 99999999999999999
Q ss_pred eeEEEeCC-eEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~-~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
|++|..+. .++|+||||+ |+|+++++ ..+.++|.....++.+|++||.|||+ ++||||||||+|||++..| .|
T Consensus 143 ygaF~~~~~~isI~mEYMDgGSLd~~~k--~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--eV 218 (364)
T KOG0581|consen 143 YGAFYSNGEEISICMEYMDGGSLDDILK--RVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--EV 218 (364)
T ss_pred eEEEEeCCceEEeehhhcCCCCHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC--CE
Confidence 99999999 4999999999 59999998 45789999999999999999999996 9999999999999999999 99
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
||||||.++..... ......||..|||||.+.+..|+...|+|+.|
T Consensus 219 KicDFGVS~~lvnS-------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLG 264 (364)
T KOG0581|consen 219 KICDFGVSGILVNS-------------IANTFVGTSAYMSPERISGESYSVKSDIWSLG 264 (364)
T ss_pred EeccccccHHhhhh-------------hcccccccccccChhhhcCCcCCcccceeccc
Confidence 99999999965421 11234589999999998665444444444444
|
|
| >KOG1787 consensus Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-40 Score=425.01 Aligned_cols=240 Identities=34% Similarity=0.499 Sum_probs=203.2
Q ss_pred ccccccccCccchhhhHhhhccccCCCCCCCcCCcccceEe-cCCCC-CCCCCCCcCccCCcchhhhcccccc-hhcccC
Q 000316 368 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQ-LDFTYS 444 (1678)
Q Consensus 368 ~~~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~-~~~~~~ 444 (1678)
..+..|+.|+|+||+|+|.+|..+||+|+|++||||||||+ ||.+. .|.+.+.+||||+||+|+++..... +...|.
T Consensus 470 ~~t~~w~~~~~s~~~~l~~l~t~agrsyndl~qypvfpwvl~dy~s~~ld~s~~~~frdlsKpigaln~~~~~~f~dry~ 549 (1126)
T KOG1787|consen 470 GITQEWQAREISNFEVLMQLNTSAGRSYNDLTQYPVFPWVLRDYSSETLDLSKLSTFRDLSKPIGALNPKRAYLFRDRYE 549 (1126)
T ss_pred CccHHHHhhccccHHHHHHHHhccCcccCccccCCCCCeeeecccchhhhcccchhHHhhcCcccCCCcccchhHhhhhh
Confidence 56788999999999999999999999999999999999999 77665 5889999999999999999875543 456777
Q ss_pred CCC----CCcccCccccCcceeeeeecccCchhHHHHHhhcc--cCCCCccchHHHhh------cCCCcccccccccCCc
Q 000316 445 SSE----IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLY------QWTPDECIPEFYCDPQ 512 (1678)
Q Consensus 445 ~~~----~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~------~~~~~EliPeff~~p~ 512 (1678)
+.+ ..+||+++|++...+++|++|.+||+.++.+++.+ +.+.+-++++.+-+ ..|++|+||||||.||
T Consensus 550 s~~D~~i~~~~~~thys~~~~~l~~l~rvepf~S~~~~l~~gkfd~~dr~~~sv~~~~r~~l~d~sdvkelipeffy~p~ 629 (1126)
T KOG1787|consen 550 SFEDQAIPSFHYGTHYSSAANVLAYLLRVEPFTSLHLQLQDGKFDHADRAFSSVASSWRRCLRDTSDVKELIPEFFYFPE 629 (1126)
T ss_pred ccccccccccccccccccccceeeeeeecCccccccccccccccccchhhHHHHHHHHhhhccchhhHHHhhhHHHHHHH
Confidence 665 34799999999999999999999999999888754 34444333333322 2368999999999999
Q ss_pred ccccCC----------CCCCCeecCCCCCCHHHHHHHHHHhhcchHHHccCCCccccccccCCCchhhHhcCCCCCCCCC
Q 000316 513 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 582 (1678)
Q Consensus 513 ~~~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~kq~g~~a~~~~Nv~~~~~~ 582 (1678)
+|.|.+ ++|.||.|||||++|++|+..||+||||+|||.++|.||||||||||+|.+|+.|.|||+..+|
T Consensus 630 ll~~~~~~~lg~~~dg~~vi~v~lppwa~~pe~f~~~nr~aLes~fvs~~l~~widlifg~Kq~g~ea~~a~nvf~~~ty 709 (1126)
T KOG1787|consen 630 LLVNSNLYNLGVRVDGEPVIDVVLPPWAKSPEDFETRNREALESEFVSCQLHQWIDLIFGYKQRGPEAVRAMNVFYYLTY 709 (1126)
T ss_pred HHhccccccceeecCCccceeeecccccCCHHHHHHHHHHHhhccccccccchhHHhhhhHhhcCHHHHHhhhhhccCCc
Confidence 998753 4689999999999999999999999999999999999999999999999999999999998764
Q ss_pred CC-----------c--------ccccC--cCcccCCCCCCCCCCcc
Q 000316 583 PT-----------K--------PKSVG--RLQLFTQPHPVRQTATW 607 (1678)
Q Consensus 583 ~~-----------~--------~~~~g--~~qlf~~pHp~r~~~~~ 607 (1678)
.. . +..+| |.|+|.++||+|.....
T Consensus 710 eG~v~~~~~~d~~~~~eai~~~i~~f~~~~~~~~~e~~~~~~~~~~ 755 (1126)
T KOG1787|consen 710 EGAVDLDSITDQVLRTEAIEAQIASFGQTPSQLLQEQHPPRASESK 755 (1126)
T ss_pred cccccccccCChhHHHHHHHHHHhhccccchhhhhhccCCcchhcc
Confidence 21 1 12345 79999999999976555
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-39 Score=374.65 Aligned_cols=173 Identities=26% Similarity=0.319 Sum_probs=154.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|.+.+.||+|+||.||||+.+ .+.+.||+|.+.+....+.+.++.. +|++|++.++|||||.+
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK------~t~~~vAik~i~K~gr~~k~l~~l~--------~ev~i~r~lkHpniv~m 66 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRK------YTIQVVAIKFIDKSGRNEKELKNLR--------QEVRILRSLKHPNIVEM 66 (808)
T ss_pred CcchhHHHHhcCCccceeeecccc------cceeEEEEEEehhcCCchHHHHHHH--------HHHHHHHhcCCcchhhH
Confidence 468999999999999999999965 5789999999999877777776666 99999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++.|++..++++|.|||.|+|+.+|. ..+.++|+.++.+++|++.||.|||+++|+|||+||.|||++.+| ++|+|
T Consensus 67 ~esfEt~~~~~vVte~a~g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~--~~Klc 142 (808)
T KOG0597|consen 67 LESFETSAHLWVVTEYAVGDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG--TLKLC 142 (808)
T ss_pred HHhhcccceEEEEehhhhhhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC--ceeec
Confidence 99999999999999999999999999 567799999999999999999999999999999999999999999 99999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
|||+||...... ...+...|||.|||||++.
T Consensus 143 dFg~Ar~m~~~t-----------~vltsikGtPlYmAPElv~ 173 (808)
T KOG0597|consen 143 DFGLARAMSTNT-----------SVLTSIKGTPLYMAPELVE 173 (808)
T ss_pred hhhhhhhcccCc-----------eeeeeccCcccccCHHHHc
Confidence 999999654211 1123446999999999864
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=368.46 Aligned_cols=211 Identities=20% Similarity=0.255 Sum_probs=179.7
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
...++|...++||+|+||+||+|+++ .++..||||.+.+.+......+... .|+++|++++|||||
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~------~~~~~VAIK~i~~~~l~~k~~e~L~--------~Ei~iLkel~H~nIV 72 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHK------KSGTEVAIKCIAKKKLNKKLVELLL--------SEIKILKELKHPNIV 72 (429)
T ss_pred cccccceehhhccCcceEEEEEeEec------cCCceEEeeeehhhccCHHHHHHHH--------HHHHHHHhcCCccee
Confidence 34789999999999999999999976 5779999999988655444333333 999999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC-Cc--
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW-- 314 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~-g~-- 314 (1678)
+++++..+++.+|+|||||. |||.++|+ ..+.+++..++.++.||+.||++||+++||||||||+||||+.. +.
T Consensus 73 ~l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~ 150 (429)
T KOG0595|consen 73 RLLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDT 150 (429)
T ss_pred eEEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCC
Confidence 99999999999999999999 59999999 56689999999999999999999999999999999999999975 22
Q ss_pred -eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCC
Q 000316 315 -SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 315 -~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR 393 (1678)
..+||+|||+||..... ....+-| |+|.|||||+++...|+.++|+|+.|.|. |+.+....+|...
T Consensus 151 ~~~LKIADFGfAR~L~~~------~~a~tlc------GSplYMAPEV~~~~~YdAKADLWSiG~Il-yq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 151 SPVLKIADFGFARFLQPG------SMAETLC------GSPLYMAPEVIMSQQYDAKADLWSIGTIL-YQCLTGKPPFDAE 217 (429)
T ss_pred CceEEecccchhhhCCch------hHHHHhh------CCccccCHHHHHhccccchhhHHHHHHHH-HHHHhCCCCcccc
Confidence 37999999999986621 1122223 79999999999999999999999999887 7777777777766
Q ss_pred CCCCC
Q 000316 394 RWGDY 398 (1678)
Q Consensus 394 s~~dl 398 (1678)
+..+|
T Consensus 218 t~~eL 222 (429)
T KOG0595|consen 218 TPKEL 222 (429)
T ss_pred CHHHH
Confidence 65544
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=372.74 Aligned_cols=177 Identities=17% Similarity=0.204 Sum_probs=149.3
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNI 237 (1678)
....+-|++++.||.|+.|.|.+|++. ++|+.+|||++.+.....+....-+. +||-+|+.+.||||
T Consensus 8 ~~tiGpwkLgkTLG~Gstg~vrlakh~------~TGqlaaiKii~k~~~~s~s~~~~Ie-------rEIviMkLi~HpnV 74 (786)
T KOG0588|consen 8 KNTIGPWKLGKTLGKGSTGCVRLAKHA------ETGQLAAIKIIPKRSELSSSQPAGIE-------REIVIMKLIEHPNV 74 (786)
T ss_pred cccccceeccccccCCCCceehhhhcc------cccceeEEEeeccccccccccccchh-------hhhHHHHHhcCCCe
Confidence 344677999999999999999999965 79999999999876322222111121 99999999999999
Q ss_pred cceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++|+++++..++|+|+||++ |.|++++. .++.+++.++..+++||+.|+.|||..+|+||||||+|+||+..+ .
T Consensus 75 l~LydVwe~~~~lylvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--n 150 (786)
T KOG0588|consen 75 LRLYDVWENKQHLYLVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--N 150 (786)
T ss_pred eeeeeeeccCceEEEEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--C
Confidence 999999999999999999999 59999998 678899999999999999999999999999999999999999999 7
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 363 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 363 (1678)
|||+|||+|..... ..--.+.| |+|+|++||++++
T Consensus 151 IKIADFGMAsLe~~------gklLeTSC------GSPHYA~PEIV~G 185 (786)
T KOG0588|consen 151 IKIADFGMASLEVP------GKLLETSC------GSPHYAAPEIVSG 185 (786)
T ss_pred EeeeccceeecccC------CccccccC------CCcccCCchhhcC
Confidence 99999999984321 11122333 6899999999754
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=372.05 Aligned_cols=176 Identities=16% Similarity=0.133 Sum_probs=149.9
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPN 236 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpN 236 (1678)
....++|.++++||+|+||+|+++..+ .+++.+|||.++++.+...+..+.+. .|.+|+.... ||.
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k------~~~e~yAIK~LKK~~Il~~d~Ve~~~-------~EkrI~~la~~HPF 430 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELK------GTNEYYAIKVLKKGDILQRDEVESLM-------CEKRIFELANRHPF 430 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEc------CCCcEEEEEEeeccceeccccHHHHH-------HHHHHHHHhccCCe
Confidence 345779999999999999999999975 57789999999998877666655553 8999888875 999
Q ss_pred ccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+++|+..|++++++|+||||+.| |+..++ ....+++..+++|+..|+.||.|||++|||+||||.+|||+|.+|
T Consensus 431 L~~L~~~fQT~~~l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG-- 505 (694)
T KOG0694|consen 431 LVNLFSCFQTKEHLFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG-- 505 (694)
T ss_pred EeecccccccCCeEEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--
Confidence 99999999999999999999996 733333 467899999999999999999999999999999999999999999
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
++||+||||+|....... ...+-| |||.|||||++.
T Consensus 506 h~kiADFGlcKe~m~~g~-----~TsTfC------GTpey~aPEil~ 541 (694)
T KOG0694|consen 506 HVKIADFGLCKEGMGQGD-----RTSTFC------GTPEFLAPEVLT 541 (694)
T ss_pred cEEecccccccccCCCCC-----cccccc------CChhhcChhhhc
Confidence 999999999997653222 222333 799999999864
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=342.35 Aligned_cols=159 Identities=19% Similarity=0.206 Sum_probs=132.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
....|+.+++||+|+||.||+|..+. +.....+.+|||+++..+.... +..+|+||+.++++++|||||.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~--~n~kr~k~yAiKkfk~~kd~tG--------iS~SAcREiaL~REl~h~nvi~ 91 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKN--TNDKRTKEYAIKKFKGEKDGTG--------ISMSACREIALLRELKHPNVIS 91 (438)
T ss_pred HHHHhhccceecccccceeeEeeecc--CCcccchhhHHHHHhccCCCCC--------cCHHHHHHHHHHHHhcCCcchh
Confidence 35579999999999999999997442 1112255899999986544322 2234569999999999999999
Q ss_pred eeeEEEe-CCeEEEeccCCCCCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-
Q 000316 240 VLGLLKT-SGLITSVIPKTPYTLENILQFS---PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW- 314 (1678)
Q Consensus 240 l~~~~~~-~~~~~lVmEy~~g~L~~~l~~~---~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~- 314 (1678)
|..+|.. +..+++++||.+.||..+|+.. +...++...++.++.||+.|+.|||++.|+||||||.|||+..+|.
T Consensus 92 Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgpe 171 (438)
T KOG0666|consen 92 LVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPE 171 (438)
T ss_pred HHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCc
Confidence 9999988 7799999999999999999863 3456899999999999999999999999999999999999998822
Q ss_pred -eeEEEEecCCcccC
Q 000316 315 -SWLYICDKPLVGFN 328 (1678)
Q Consensus 315 -~~lKL~DFGlA~~~ 328 (1678)
+.+||+|||+||..
T Consensus 172 rG~VKIaDlGlaR~~ 186 (438)
T KOG0666|consen 172 RGRVKIADLGLARLF 186 (438)
T ss_pred cCeeEeecccHHHHh
Confidence 29999999999953
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=343.40 Aligned_cols=267 Identities=22% Similarity=0.323 Sum_probs=240.5
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecC--CCEEEEEecCCCCCCeEEEEeCCCCe
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQD--ECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspd--g~~LaSgS~d~~~DgtVrlWDl~tg~ 1364 (1678)
+||.|+.. |+|||++|.+++|+.. ...+++|+||++.|.++.|+|. +..+|||+. ||+|++|++++..
T Consensus 182 ~fS~ds~~-----laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~----Dgtvklw~~~~e~ 252 (459)
T KOG0272|consen 182 SFSRDSKH-----LATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASA----DGTVKLWKLSQET 252 (459)
T ss_pred EeecCCCe-----EEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeecc----CCceeeeccCCCc
Confidence 49999987 9999999999999988 7799999999999999999997 579999997 9999999999999
Q ss_pred EEEEEecCCccEEEEeecCCCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCC
Q 000316 1365 CVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTL 1442 (1678)
Q Consensus 1365 ~l~~l~gH~~~V~sV~fs~~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~ 1442 (1678)
.++.+.||...|..|+|+|+|.+|+ |.|.+-++||+++++.+....+ |
T Consensus 253 ~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEG------------------------------H 302 (459)
T KOG0272|consen 253 PLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEG------------------------------H 302 (459)
T ss_pred chhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcc------------------------------c
Confidence 9999999999999999999999994 4599999999999887644444 4
Q ss_pred CCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccC
Q 000316 1443 SSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVA 1522 (1678)
Q Consensus 1443 s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p 1522 (1678)
+.+|.+++|+ +||..+++|+.|..-||||+++|+++..+.+|. ..|.+|+|+ |
T Consensus 303 s~~v~~iaf~----------~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~------k~I~~V~fs-----------P 355 (459)
T KOG0272|consen 303 SKGVFSIAFQ----------PDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHI------KEILSVAFS-----------P 355 (459)
T ss_pred ccccceeEec----------CCCceeeccCccchhheeecccCcEEEEecccc------cceeeEeEC-----------C
Confidence 4555555555 569999999999999999999999999999754 457888875 5
Q ss_pred CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCE
Q 000316 1523 SPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI 1600 (1678)
Q Consensus 1523 ~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V 1600 (1678)
+|-.+||||.|++++|||+|..+++.++.+|.+-|+.|. .| .|.+|+|+|.|++++||...+. .++.++.||.+.|
T Consensus 356 NGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~--~~~ksLaGHe~kV 433 (459)
T KOG0272|consen 356 NGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTW--SPLKSLAGHEGKV 433 (459)
T ss_pred CceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCc--ccchhhcCCccce
Confidence 667999999999999999999999999999999999999 76 7789999999999999999888 6788999999999
Q ss_pred EE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1601 SG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1601 ~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
.+ +++|++.++|++.|+ +++|.
T Consensus 434 ~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 434 ISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEEEeccCCceEEEeccCceeeecc
Confidence 95 999999999999999 99995
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=340.37 Aligned_cols=277 Identities=21% Similarity=0.251 Sum_probs=242.5
Q ss_pred cccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCC--CcEEeC--CCcEEEEEC
Q 000316 1325 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSS--GRIASC--DGTLHVWNS 1400 (1678)
Q Consensus 1325 gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~--~~laS~--DgtVrIWD~ 1400 (1678)
|-+.+|..+.||.|++.|+|||- +|.++||+..+...+++|.||++.|.++.|+|.. ..++|| ||+|++|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~sw----sG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~ 248 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSW----SGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKL 248 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeec----CCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeecc
Confidence 56788999999999999999995 9999999999999999999999999999999973 356555 999999999
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
.+...+..+.+|. .+|..++|+|+|++|++++.|.+-++|
T Consensus 249 ~~e~~l~~l~gH~----------------------------------------~RVs~VafHPsG~~L~TasfD~tWRlW 288 (459)
T KOG0272|consen 249 SQETPLQDLEGHL----------------------------------------ARVSRVAFHPSGKFLGTASFDSTWRLW 288 (459)
T ss_pred CCCcchhhhhcch----------------------------------------hhheeeeecCCCceeeecccccchhhc
Confidence 9888888887663 235566777789999999999999999
Q ss_pred ECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEE
Q 000316 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1560 (1678)
Q Consensus 1481 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sv 1560 (1678)
|++++..+...+|| +..|.+++|. +||.++++|+-|..-+|||+|+|+++..+.||...|.+|
T Consensus 289 D~~tk~ElL~QEGH------s~~v~~iaf~-----------~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V 351 (459)
T KOG0272|consen 289 DLETKSELLLQEGH------SKGVFSIAFQ-----------PDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSV 351 (459)
T ss_pred ccccchhhHhhccc------ccccceeEec-----------CCCceeeccCccchhheeecccCcEEEEecccccceeeE
Confidence 99999988777755 4557888875 566899999999999999999999999999999999999
Q ss_pred E-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEe-cCCEEEEEeCCC-eEEEecCCCCCCCCccee
Q 000316 1561 A-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSV-WGQDVISISNNK-IGLSSLSKSADEDGQHRL 1635 (1678)
Q Consensus 1561 a-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSp-dg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~ 1635 (1678)
+ +|+|..|||||.|++++|||++.. ..++++.+|++-|+ .|+| .|.+|+|+|.|. +++|+-. +.++
T Consensus 352 ~fsPNGy~lATgs~Dnt~kVWDLR~r--~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~-----~~~~-- 422 (459)
T KOG0272|consen 352 AFSPNGYHLATGSSDNTCKVWDLRMR--SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTR-----TWSP-- 422 (459)
T ss_pred eECCCceEEeecCCCCcEEEeeeccc--ccceecccccchhhheEecccCCeEEEEcccCcceeeecCC-----Cccc--
Confidence 9 999999999999999999999987 56899999999999 5898 688999999999 9999953 2221
Q ss_pred ccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1636 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1636 ~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+ ... .+|.+.|-++++++|+..++|+|.|.++|+|.
T Consensus 423 ----~-ksL--aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 423 ----L-KSL--AGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred ----c-hhh--cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 1 111 26999999999999999999999999999994
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=362.39 Aligned_cols=314 Identities=17% Similarity=0.261 Sum_probs=204.0
Q ss_pred EeCCCceeEEeccccccEEEEEEecCC-CEEEEEecCCCCCCeEEEEeCCC-------CeEEEEEecCCccEEEEeecCC
Q 000316 1313 WKIKASILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTR-------INCVSGYYGHEEVVNDICVLSS 1384 (1678)
Q Consensus 1313 Wd~~~~~l~tl~gH~~~V~svafspdg-~~LaSgS~d~~~DgtVrlWDl~t-------g~~l~~l~gH~~~V~sV~fs~~ 1384 (1678)
|+.+|..+..+..|+..|..++.++.. .+++|||. ||+||+||+.. .++..++.--...|.++.....
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~----DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~ 1109 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSD----DGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGN 1109 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecC----CceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccC
Confidence 888899999999999999999998876 89999997 99999999743 2344455445677888888777
Q ss_pred CCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEee
Q 000316 1385 SGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHI 1462 (1678)
Q Consensus 1385 ~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~s 1462 (1678)
+..+ ++.||.|++.++.-....+... .+..+.+. ...+..+.+.++.
T Consensus 1110 ~~~~Av~t~DG~v~~~~id~~~~~~~~~---------------------~~~ri~n~----------~~~g~vv~m~a~~ 1158 (1431)
T KOG1240|consen 1110 GDQFAVSTKDGSVRVLRIDHYNVSKRVA---------------------TQVRIPNL----------KKDGVVVSMHAFT 1158 (1431)
T ss_pred CCeEEEEcCCCeEEEEEcccccccccee---------------------eeeecccc----------cCCCceEEeeccc
Confidence 7777 5559999999987521110000 00001111 1111112222222
Q ss_pred cC-CC-EEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEe
Q 000316 1463 EC-VE-RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1678)
Q Consensus 1463 p~-g~-~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD 1540 (1678)
.. +. .++.+..-+.|..||+++.....+++... -.+.|+++|.+ +.++|++.|+..|.+.+||
T Consensus 1159 ~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~----~hG~vTSi~id-----------p~~~WlviGts~G~l~lWD 1223 (1431)
T KOG1240|consen 1159 AIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQL----RHGLVTSIVID-----------PWCNWLVIGTSRGQLVLWD 1223 (1431)
T ss_pred ccccceeEEEEEeccceEEecchhhhhHHhhhcCc----cccceeEEEec-----------CCceEEEEecCCceEEEEE
Confidence 22 23 67788888999999999877666555332 24568888876 4557999999999999999
Q ss_pred CCCCcEEEEEe-ccCCCeEEEE-cC---CCCEEEEEe--CCCcEEEEEcCCCCCCCCeEeecC-C---------------
Q 000316 1541 VRSGNVIASWR-AHDGYVTKLA-AP---EDHLLVSSS--LDKTLRIWDLRRNWPSQPTVFKGH-T--------------- 1597 (1678)
Q Consensus 1541 ~~tg~~i~~l~-gH~~~V~sva-sp---dg~~LaSgS--~DgtI~IWDl~~~~~~~~~~l~gH-~--------------- 1597 (1678)
+|=+.++..|. ++..+++.|. +| .....++++ ..+.|.+|++.++.. ..++-.- .
T Consensus 1224 LRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~g~~--~~vl~~s~~~p~ls~~~Ps~~~~k 1301 (1431)
T KOG1240|consen 1224 LRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMETGLR--QTVLWASDGAPILSYALPSNDARK 1301 (1431)
T ss_pred eecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecccCcc--eEEEEcCCCCcchhhhcccccCCC
Confidence 99999999987 4567888887 33 234555544 467899999998842 2232211 0
Q ss_pred -C---CEE-EEEecCCEEEEEeCCC-eEEEecCCCCCC-----------------------CCcc----------eeccc
Q 000316 1598 -N---GIS-GFSVWGQDVISISNNK-IGLSSLSKSADE-----------------------DGQH----------RLVPQ 1638 (1678)
Q Consensus 1598 -~---~V~-afSpdg~~LaSgs~D~-I~vwdl~~~~~~-----------------------~g~~----------~~~~~ 1638 (1678)
. .+. ++.--+..+.+|+.|. |+.||...+.-. .|.. ....+
T Consensus 1302 p~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t 1381 (1431)
T KOG1240|consen 1302 PDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLT 1381 (1431)
T ss_pred CCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhhcCch
Confidence 0 111 2333456777777766 999997643211 0000 00000
Q ss_pred ----eeeeeec-----CCCccCcEEEEEEecCC-CEEEEEeCCCcEEEcC
Q 000316 1639 ----KLYMVDN-----GAKNLSVLSSISILPFS-RLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1639 ----kl~~~~~-----g~~h~~~I~svafsPd~-~lLatgs~DG~IrIwd 1678 (1678)
+...... ...|..+|+++++.-.. .+|++++.||.|+||-
T Consensus 1382 ~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1382 EALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred hhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 0000000 12678899999887544 6899999999999993
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=368.23 Aligned_cols=150 Identities=21% Similarity=0.201 Sum_probs=134.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-C-----Cc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-H-----PN 236 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-H-----pN 236 (1678)
+|++++.||+|+||.|.+|.+. .+++.||||+++..+... .+.. .|+.+|..|+ | -|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~------~T~e~VAIKIiKN~k~f~---~Q~~--------~Ei~iL~~ln~~d~~~~~n 249 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDH------KTGEIVAIKIIKNKKRFL---RQAQ--------IEIRILELLNKHDPDDKYN 249 (586)
T ss_pred EEEEEEEecccccceeEEEEec------CCCcEEEEEeeccChHHH---HHHH--------HHHHHHHHHhccCCCCCee
Confidence 7999999999999999999975 689999999997654322 2222 8999999997 4 38
Q ss_pred ccceeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
||+++++|...+++|||+|.++.+|.++|+.++...++...++.++.||+.||.+||+.||||+|||||||||.+-+...
T Consensus 250 ~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~ 329 (586)
T KOG0667|consen 250 IVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSR 329 (586)
T ss_pred EEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCc
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999999877678
Q ss_pred EEEEecCCcccCC
Q 000316 317 LYICDKPLVGFNS 329 (1678)
Q Consensus 317 lKL~DFGlA~~~~ 329 (1678)
|||+|||.|.+..
T Consensus 330 vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 330 IKVIDFGSSCFES 342 (586)
T ss_pred eeEEecccccccC
Confidence 9999999998543
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=363.57 Aligned_cols=175 Identities=23% Similarity=0.225 Sum_probs=148.1
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH--HHHHHHHhcCCCchhHHHhhccCC-CCc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCLR-HPN 236 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~l~~~~~~~~~Ei~iL~~l~-HpN 236 (1678)
..++|++.+.||+|+||.|++|.+. .++..||+|++++.+.... ...+.++ +|+.+++.++ |||
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~------~t~~~vAiKii~~~~~~~~~~~~~~~i~-------rEi~~~~~~~~Hpn 81 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHR------LTGEKVAIKIIDRKKVSSKSQKLDELIK-------REISILRRLRSHPN 81 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeec------cCCCeEEEEEechhcccccccccchhhH-------HHHHHHHHhccCCC
Confidence 3678999999999999999999965 4679999998876533211 2333443 8999999999 999
Q ss_pred ccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC-Cc
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW 314 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~-g~ 314 (1678)
|+++++++.+...+|+|||||.| +|+++|. ..+++.|.+++.+++||+.||+|||++||+||||||||||++.+ +
T Consensus 82 I~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~--~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~- 158 (370)
T KOG0583|consen 82 IIRLLEVFATPTKIYIVMEYCSGGDLFDYIV--NKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG- 158 (370)
T ss_pred EeEEEEEEecCCeEEEEEEecCCccHHHHHH--HcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC-
Confidence 99999999999999999999995 9999999 37789999999999999999999999999999999999999999 7
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
.+||+|||++..... ......+.| ||+.|+|||++.
T Consensus 159 -~~Kl~DFG~s~~~~~-----~~~~l~t~c------Gsp~Y~aPEvl~ 194 (370)
T KOG0583|consen 159 -NLKLSDFGLSAISPG-----EDGLLKTFC------GSPAYAAPEVLS 194 (370)
T ss_pred -CEEEeccccccccCC-----CCCcccCCC------CCcccCCHHHhC
Confidence 899999999996531 112233333 899999999974
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=330.92 Aligned_cols=175 Identities=18% Similarity=0.179 Sum_probs=147.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..+.|++.+.||+|.|+.|+++.+. .+|+.+|+|+++..+....+.++.- +|+.|-+.|+|||||+
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~------~tg~~fa~kiin~~k~~~~~~e~l~--------rEarIC~~LqHP~Ivr 74 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHK------TTGLEFAAKIINTKKLSARDFQKLE--------REARICRKLQHPNIVR 74 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhc------cchHHHHHHHhhhhhhccccHHHHH--------HHHHHHHhcCCCcEee
Confidence 4678999999999999999998854 7899999999998777766555544 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-eeE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWL 317 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-~~l 317 (1678)
|.+.+......|||+|+|.| +|..-|- .+..++|..+-.+++||+.||.|||.+||||||+||+|+|+.+... .-+
T Consensus 75 L~~ti~~~~~~ylvFe~m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~v 152 (355)
T KOG0033|consen 75 LHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAV 152 (355)
T ss_pred hhhhhcccceeEEEEecccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCce
Confidence 99999999999999999996 7766665 2366899999999999999999999999999999999999975432 479
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
||+|||+|...... ..-.+..|||.|||||++.
T Consensus 153 KL~~FGvAi~l~~g------------~~~~G~~GtP~fmaPEvvr 185 (355)
T KOG0033|consen 153 KLADFGLAIEVNDG------------EAWHGFAGTPGYLSPEVLK 185 (355)
T ss_pred eecccceEEEeCCc------------cccccccCCCcccCHHHhh
Confidence 99999999965521 0112346899999999864
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=354.73 Aligned_cols=250 Identities=18% Similarity=0.186 Sum_probs=208.9
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPN 236 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpN 236 (1678)
.+...+|..++.||+|+|++|++|+++ .+++.||||++.+.....+.....+. +|-.+|..| .||.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~------~t~keYAiKVl~K~~Iike~KvkYV~-------~Ek~~l~~L~~hPg 135 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREK------ATGKEYAIKVLDKRYIIKEKKVKYVT-------REKEALTQLSGHPG 135 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeec------CCCceeeHhhhhHHHHHhhcccchhh-------HHHHHHHHhhCCCC
Confidence 555779999999999999999999965 58899999999887666666666665 999999999 8999
Q ss_pred ccceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 237 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
||+||..|+++..+|+|+||++ |+|.++|+ +-+.|++..+++|+.||+.||+|||++|||||||||||||++.+|
T Consensus 136 ivkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm-- 211 (604)
T KOG0592|consen 136 IVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG-- 211 (604)
T ss_pred eEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC--
Confidence 9999999999999999999999 69999999 568899999999999999999999999999999999999999999
Q ss_pred eEEEEecCCcccCCCCCccc----ccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhcccc
Q 000316 316 WLYICDKPLVGFNSIADWCT----IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~----~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~a 391 (1678)
++||+|||.|+......... ....... .....+||..|.+||++.....++.+|+|.+|||. +.+++
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s--~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCil-------yQmla 282 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASS--RRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCIL-------YQMLA 282 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccC--cccceeeeecccCHHHhcCCCCCcccchHHHHHHH-------HHHhc
Confidence 99999999999765432221 1111111 12346799999999999999999999999999775 44557
Q ss_pred CCC-CCCCcCCcccceEecCCCCCCCCCCCcCccCCcchhhhc
Q 000316 392 GRR-WGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLA 433 (1678)
Q Consensus 392 GRs-~~dl~q~pv~pwv~d~~~~~~~~~~~~~rdLskp~~~l~ 433 (1678)
|.+ |.+-++|-+|.-|++..-+.....|...|||-+-+-+.+
T Consensus 283 G~PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~d 325 (604)
T KOG0592|consen 283 GQPPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRD 325 (604)
T ss_pred CCCCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccC
Confidence 766 788999999999995544444556677888877665443
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=332.11 Aligned_cols=211 Identities=21% Similarity=0.265 Sum_probs=183.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|+.++.||.|+||.|.+++++ .++..+|+|++++.+.......+... +|..+|+.+.||++++
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k------~~g~yYAmKvL~k~~vVklKQveH~~-------nEk~vL~~v~~PFlv~ 108 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREK------HSGNYYAMKVLDKQKVVKLKQVEHTH-------NEKRVLKAVSHPFLVK 108 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEc------cCCceeehhhcCHHHHHHHHHHHHHh-------hHHHHHhhccCceeEE
Confidence 3678999999999999999999976 57899999999987766655555554 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++.|.+.+++||||||++| .|+.+++ +.+++++..+++|+.||+.||+|||+++|++|||||||||||.+| ++|
T Consensus 109 l~~t~~d~~~lymvmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--~iK 184 (355)
T KOG0616|consen 109 LYGTFKDNSNLYMVMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--HIK 184 (355)
T ss_pred EEEeeccCCeEEEEEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC--cEE
Confidence 99999999999999999995 9999999 678899999999999999999999999999999999999999999 999
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC-CCC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGD 397 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs-~~d 397 (1678)
|+|||+|+..... ..+-| |||.|+|||++..++|+.++|.|+.| ++..++++|.+ |.+
T Consensus 185 itDFGFAK~v~~r--------T~TlC------GTPeYLAPEii~sk~ynkavDWWalG-------VLIYEMlaG~pPF~~ 243 (355)
T KOG0616|consen 185 ITDFGFAKRVSGR--------TWTLC------GTPEYLAPEIIQSKGYNKAVDWWALG-------VLIYEMLAGYPPFYD 243 (355)
T ss_pred EEeccceEEecCc--------EEEec------CCccccChHHhhcCCCCcchhHHHHH-------HHHHHHHcCCCCCcC
Confidence 9999999976531 22233 89999999999999999999999999 66666677776 455
Q ss_pred CcCCcccceEe
Q 000316 398 YTFHMVMPWVI 408 (1678)
Q Consensus 398 l~q~pv~pwv~ 408 (1678)
-+...++--|+
T Consensus 244 ~~~~~iY~KI~ 254 (355)
T KOG0616|consen 244 DNPIQIYEKIL 254 (355)
T ss_pred CChHHHHHHHH
Confidence 44455555555
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=343.69 Aligned_cols=174 Identities=18% Similarity=0.161 Sum_probs=140.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|...+.||+|+||.||++.+. .+|...|||.+....... .+.+. +|+.+|++++|||||++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~------~~g~~~AvK~v~~~~~~~---~~~l~-------~Ei~iL~~l~~p~IV~~ 79 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNK------KTGELMAVKSVELEDSPT---SESLE-------REIRILSRLNHPNIVQY 79 (313)
T ss_pred cchhhhhccccCccceEEEEEEec------CCCcceeeeeeecccchh---HHHHH-------HHHHHHHhCCCCCEEee
Confidence 456899999999999999999965 358899999987652221 22232 99999999999999999
Q ss_pred eeEEEeCC--eEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC-CCcee
Q 000316 241 LGLLKTSG--LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSW 316 (1678)
Q Consensus 241 ~~~~~~~~--~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~g~~~ 316 (1678)
+|...... .++|.|||++ |+|.+++..... .+++..++.+.+||++||+|||++|||||||||+|||++. ++ .
T Consensus 80 ~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~--~ 156 (313)
T KOG0198|consen 80 YGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG--D 156 (313)
T ss_pred CCccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC--e
Confidence 99855544 6999999999 599999995444 7999999999999999999999999999999999999999 67 8
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
+||+|||+++.......... ......||+.|||||++
T Consensus 157 ~KlaDFG~a~~~~~~~~~~~--------~~~~~~Gtp~~maPEvi 193 (313)
T KOG0198|consen 157 VKLADFGLAKKLESKGTKSD--------SELSVQGTPNYMAPEVI 193 (313)
T ss_pred EEeccCcccccccccccccc--------ccccccCCccccCchhh
Confidence 99999999986542110000 11123578888888775
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=334.70 Aligned_cols=209 Identities=19% Similarity=0.186 Sum_probs=182.4
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...+|+++++||+|+||+||++.+. .++..+|.|.+.-+..........+ .|+.+|++|+|||||+
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~~------~~g~l~a~K~i~f~~md~k~rq~~v--------~Ei~lLkQL~HpNIVq 82 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQCL------LDGKLVALKKIQFGMMDAKARQDCV--------KEISLLKQLNHPNIVQ 82 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeeec------cCcchhhhhhcchhhccHHHHHHHH--------HHHHHHHhcCCchHHH
Confidence 3568999999999999999999964 6899999999987666666555555 8999999999999999
Q ss_pred eee-EEEeCCe-EEEeccCCC-CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--ceecCCCCCCeEec
Q 000316 240 VLG-LLKTSGL-ITSVIPKTP-YTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS--LG--IAHRSVCPSNVLLT 310 (1678)
Q Consensus 240 l~~-~~~~~~~-~~lVmEy~~-g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~--~g--IiHRDLKP~NILl~ 310 (1678)
+|+ .|..+.. ++||||||+ |||..+|+. ...+.++|..++.++.|+|.||.+||+ .. |+||||||.||+|+
T Consensus 83 Yy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~ 162 (375)
T KOG0591|consen 83 YYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT 162 (375)
T ss_pred HHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc
Confidence 999 5655554 999999999 799999985 345679999999999999999999999 55 99999999999999
Q ss_pred CCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccc
Q 000316 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 390 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~ 390 (1678)
.+| .+||.|||++|..... ..+....+|||+||+||++.+.+|+.++|+|+.||+. ||+.+.-.+|
T Consensus 163 ~~g--vvKLGDfGL~r~l~s~-----------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCll-yEMcaL~~PF 228 (375)
T KOG0591|consen 163 ANG--VVKLGDFGLGRFLSSK-----------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLL-YEMCALQSPF 228 (375)
T ss_pred CCC--ceeeccchhHhHhcch-----------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHH-HHHHhcCCCc
Confidence 999 9999999999976521 1134456899999999999999999999999999998 9999999999
Q ss_pred cCCCCC
Q 000316 391 AGRRWG 396 (1678)
Q Consensus 391 aGRs~~ 396 (1678)
.||++-
T Consensus 229 ~g~n~~ 234 (375)
T KOG0591|consen 229 YGDNLL 234 (375)
T ss_pred ccccHH
Confidence 998653
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=335.11 Aligned_cols=190 Identities=19% Similarity=0.159 Sum_probs=141.4
Q ss_pred ccccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHH---HHhcC-CCchhHHHhhc
Q 000316 155 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNF---LRLIG-VPSFDESSVPG 230 (1678)
Q Consensus 155 ~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~---l~~~~-~~~~~Ei~iL~ 230 (1678)
.......++|++++.||+|.||.|-+|++. .+++.||||++.+.+...+..... .++.+ ....+||.||+
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~------~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailK 163 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDE------VDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILK 163 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeec------CCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHH
Confidence 344556789999999999999999999965 578999999998754332211000 00000 01239999999
Q ss_pred cCCCCcccceeeEEEeC--CeEEEeccCCC-CCHHHHHhhCCCCC-CCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCC
Q 000316 231 CLRHPNVAPVLGLLKTS--GLITSVIPKTP-YTLENILQFSPNAL-KSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~--~~~~lVmEy~~-g~L~~~l~~~~~~~-l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 306 (1678)
+|+|||||+|+++..+. +.+|||+|||. |.+...= ..+. +++.+++.|++.++.||+|||.+|||||||||+|
T Consensus 164 kl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsN 240 (576)
T KOG0585|consen 164 KLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSN 240 (576)
T ss_pred hcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence 99999999999999875 48999999998 4544332 3444 8999999999999999999999999999999999
Q ss_pred eEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 307 VLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 307 ILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
+||+++| ++||+|||.+-......... .-.+.....|||.|||||++
T Consensus 241 LLl~~~g--~VKIsDFGVs~~~~~~~~~~------~d~~L~~tvGTPAF~APE~c 287 (576)
T KOG0585|consen 241 LLLSSDG--TVKISDFGVSNEFPQGSDEG------SDDQLSRTVGTPAFFAPELC 287 (576)
T ss_pred eEEcCCC--cEEeeccceeeecccCCccc------cHHHHhhcCCCccccchHhh
Confidence 9999999 99999999987542110000 00011123577778887764
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=298.53 Aligned_cols=280 Identities=19% Similarity=0.232 Sum_probs=246.0
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~D 1352 (1678)
..+|.||.+.|++ +++|++. |+++|.||.+.|||.- +...+.+.--+..|..++|+|.|+.+|+||- |
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~-----ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGL----d 118 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRR-----IVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGL----D 118 (343)
T ss_pred EEEecccccceeeeEecCCcCe-----EEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCc----C
Confidence 3689999999997 9999987 9999999999999966 6788888888999999999999999999998 8
Q ss_pred CeEEEEeCCCC------eEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCceeEEecccCccccccCCCCCC
Q 000316 1353 GTVQKWELTRI------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1425 (1678)
Q Consensus 1353 gtVrlWDl~tg------~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~ 1425 (1678)
+...||++.+. +..+.+.||++.+.++.|..++..+ +|+|.|+.+||+++|+.+..|.+|..
T Consensus 119 N~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~g----------- 187 (343)
T KOG0286|consen 119 NKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTG----------- 187 (343)
T ss_pred ceeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcc-----------
Confidence 99999999865 3456789999999999998876666 78899999999999999999987643
Q ss_pred ccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcce
Q 000316 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1505 (1678)
Q Consensus 1426 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~ 1505 (1678)
.|.++++.|. +++.+++|+.|++.++||+|.+.++++|.+|.. .|+
T Consensus 188 -------------------DV~slsl~p~---------~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghes------DIN 233 (343)
T KOG0286|consen 188 -------------------DVMSLSLSPS---------DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHES------DIN 233 (343)
T ss_pred -------------------cEEEEecCCC---------CCCeEEecccccceeeeeccCcceeEeeccccc------ccc
Confidence 3444444432 799999999999999999999999999997654 478
Q ss_pred EEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEec--cCCCeEEEE-cCCCCEEEEEeCCCcEEEEEc
Q 000316 1506 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA--HDGYVTKLA-APEDHLLVSSSLDKTLRIWDL 1582 (1678)
Q Consensus 1506 sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~g--H~~~V~sva-spdg~~LaSgS~DgtI~IWDl 1582 (1678)
+|+|. |+|.-+++||+|+++|+||+|....+..+.. -..+|++|+ +..|++|.+|..|.++.+||.
T Consensus 234 sv~ff-----------P~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDt 302 (343)
T KOG0286|consen 234 SVRFF-----------PSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDT 302 (343)
T ss_pred eEEEc-----------cCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeec
Confidence 89885 5667899999999999999999999988872 236799999 899999999999999999999
Q ss_pred CCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1583 RRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1583 ~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
-.+ +.+..+.||.+.|.+ ++|||--|+|||.|. ++||.
T Consensus 303 lk~--e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 303 LKG--ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred ccc--ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 887 667799999999996 899999999999999 99994
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=332.81 Aligned_cols=149 Identities=23% Similarity=0.281 Sum_probs=130.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|++. .++..||+|.++...... ...... +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~niv~~ 68 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEEG-APCTAI--------REVSLLKNLKHANIVTL 68 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEEC------CCCCEEEEEEecccccCC-cchhHH--------HHHHHHHhCCCCCEeeE
Confidence 678999999999999999999965 467899999986532221 112222 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.+++..++||||++|+|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~ 145 (288)
T cd07871 69 HDIIHTERCLTLVFEYLDSDLKQYLDN-CGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLA 145 (288)
T ss_pred EEEEcCCCeEEEEEeCCCcCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999999873 344578999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 146 DfG~~~~ 152 (288)
T cd07871 146 DFGLARA 152 (288)
T ss_pred cCcceee
Confidence 9999874
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=322.90 Aligned_cols=153 Identities=20% Similarity=0.248 Sum_probs=136.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||.|.-|+||+|+.+ .++..+|+|++.+...... ++.. ++..|-+||+.++||.++.|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~------~t~~~fAmKVmdK~~l~~r--kKl~-----Ra~tE~eIL~~lDHPFlPTL 142 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELR------GTNCLFAMKVMDKESLASR--KKLK-----RAQTEREILSLLDHPFLPTL 142 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEec------CCCceEEEEEecHHHHhhh--hHHH-----HHHHHHHHHHhcCCCccchh
Confidence 457999999999999999999965 4568999999987544332 2222 23389999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
|..|+++...|+|||||+| +|..+.+..+.+.+++..+++|+.+++.||+|||-.|||+||||||||||-++| +|.|
T Consensus 143 Ya~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredG--HIML 220 (459)
T KOG0610|consen 143 YASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDG--HIML 220 (459)
T ss_pred hheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCC--cEEe
Confidence 9999999999999999995 999999999999999999999999999999999999999999999999999999 9999
Q ss_pred EecCCcccC
Q 000316 320 CDKPLVGFN 328 (1678)
Q Consensus 320 ~DFGlA~~~ 328 (1678)
+||-|+...
T Consensus 221 sDFDLS~~~ 229 (459)
T KOG0610|consen 221 SDFDLSLRC 229 (459)
T ss_pred eeccccccC
Confidence 999999754
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=318.34 Aligned_cols=176 Identities=19% Similarity=0.205 Sum_probs=146.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccC-CCCcc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNI 237 (1678)
..+|+..+.||+|..++|.+|.++ +++..+|+|++....... +...+.+. ...+|+.||+++ .||||
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k------~t~~e~a~kii~~~at~~~~e~~~~~~E----aT~~Ev~ILRqv~GHP~I 85 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHK------ETGKEFAVKIIDVTATTESGETPYEMRE----ATRQEISILRQVMGHPYI 85 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhc------ccccceeEEEEEecccccCCccHHHHHH----HHHHHHHHHHHhcCCCcE
Confidence 567899999999999999999865 678889999987532221 11222221 234999999999 69999
Q ss_pred cceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++.++|+++..+++|+|.|+ |.|+|++. ..-.++|.+.+.+|+|++.|+.|||.++||||||||+|||++++. +
T Consensus 86 I~l~D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~--~ 161 (411)
T KOG0599|consen 86 IDLQDVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNM--N 161 (411)
T ss_pred EEeeeeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecccc--c
Confidence 999999999999999999999 89999998 567799999999999999999999999999999999999999999 9
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+||+|||+|.......+ -+.-| |||.|.|||.+.
T Consensus 162 i~isDFGFa~~l~~Gek------LrelC------GTPgYLAPEtik 195 (411)
T KOG0599|consen 162 IKISDFGFACQLEPGEK------LRELC------GTPGYLAPETIK 195 (411)
T ss_pred eEEeccceeeccCCchh------HHHhc------CCCcccChhhee
Confidence 99999999997653221 11123 899999999864
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=322.18 Aligned_cols=182 Identities=14% Similarity=0.105 Sum_probs=151.7
Q ss_pred cccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCC
Q 000316 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 235 (1678)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~Hp 235 (1678)
.+....++|++...||.|.-++||+|+.. ..+..||||+++.++.... .+.++ +|+..|+.++||
T Consensus 20 ~~p~n~~~YeL~e~IG~G~sa~V~~A~c~------p~~e~VAIK~inLEkc~~~--ld~l~-------kE~~~msl~~HP 84 (516)
T KOG0582|consen 20 EFPLNAKDYELQEVIGVGASAVVYLARCI------PTNEVVAIKIINLEKCNND--LDALR-------KEVQTMSLIDHP 84 (516)
T ss_pred cCCCCccceeEEEEEeccceeEeeeeeec------ccCCEEEEEEeehhhhhhh--HHHHH-------HHHHHhhhcCCC
Confidence 34445779999999999999999999954 6779999999988665543 33443 999999999999
Q ss_pred cccceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
||++++..|..+..+|+||+||. |++.++++..-...+.|..|..+++++++||.|||.+|-||||||+.||||+.+|
T Consensus 85 NIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG- 163 (516)
T KOG0582|consen 85 NIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG- 163 (516)
T ss_pred CcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC-
Confidence 99999999999999999999999 6999999875555699999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
.|||+|||.+....... .+........+||+.|||||++
T Consensus 164 -~VkLadFgvsa~l~~~G-------~R~~~rf~tfvgtp~wmAPEvl 202 (516)
T KOG0582|consen 164 -TVKLADFGVSASLFDSG-------DRQVTRFNTFVGTPCWMAPEVL 202 (516)
T ss_pred -cEEEcCceeeeeecccC-------ceeeEeeccccCcccccChHHh
Confidence 99999999887554311 1111111345678888888874
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=332.29 Aligned_cols=149 Identities=21% Similarity=0.265 Sum_probs=130.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|+++ .++..||+|++....... ...... +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~niv~~ 68 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSK------VNGKLVALKVIRLQEEEG-TPFTAI--------REASLLKGLKHANIVLL 68 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEEC------CCCCEEEEEEeccccccc-cchhHH--------HHHHHHhhCCCCCcCeE
Confidence 578999999999999999999965 467899999987542221 112223 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.++...|+||||++++|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 145 (303)
T cd07869 69 HDIIHTKETLTLVFEYVHTDLCQYMDK-HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG--ELKLA 145 (303)
T ss_pred EEEEecCCeEEEEEECCCcCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999998874 345688999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 146 Dfg~~~~ 152 (303)
T cd07869 146 DFGLARA 152 (303)
T ss_pred CCCccee
Confidence 9999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=293.25 Aligned_cols=283 Identities=19% Similarity=0.297 Sum_probs=228.6
Q ss_pred cccccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC------CceeEEeccccccEEEEEEecCCCEEEEEecCC
Q 000316 1276 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK------ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~------~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~ 1349 (1678)
..++.||++||....-.-. +.+.+.++|.|+++.+|++. |..++.++||+..|..++.++||++.+|||.
T Consensus 8 ~~tl~gh~d~Vt~la~~~~--~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw-- 83 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIK--NSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW-- 83 (315)
T ss_pred eeeecCCCceEEEEEeecC--CCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc--
Confidence 4578999999997332211 23559999999999999986 5678999999999999999999999999996
Q ss_pred CCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1350 ~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
|+++|+||+.+|+..+.|.||...|.+|+|++++.+++ |.|+||++||+. |.|.-+.....
T Consensus 84 --D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~-------------- 146 (315)
T KOG0279|consen 84 --DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDS-------------- 146 (315)
T ss_pred --cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCC--------------
Confidence 99999999999999999999999999999999999984 559999999986 55554444321
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecC--CCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcce
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIEC--VERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1505 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~--g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~ 1505 (1678)
+.++ |+|+.|+|+ ...+++++.|++||+||+++.+..+.+.+| ...++
T Consensus 147 --------------~~~W----------VscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh------~~~v~ 196 (315)
T KOG0279|consen 147 --------------HREW----------VSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH------SGYVN 196 (315)
T ss_pred --------------CcCc----------EEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccc------cccEE
Confidence 1233 555555555 678999999999999999998888777754 55678
Q ss_pred EEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCC
Q 000316 1506 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR 1584 (1678)
Q Consensus 1506 sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~ 1584 (1678)
.++++ |||.++++|+.||.+.+||++.++.+.++. |...|++++ +|+. +.+.+..+..|+|||+.+
T Consensus 197 t~~vS-----------pDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnr-ywL~~at~~sIkIwdl~~ 263 (315)
T KOG0279|consen 197 TVTVS-----------PDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNR-YWLCAATATSIKIWDLES 263 (315)
T ss_pred EEEEC-----------CCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCc-eeEeeccCCceEEEeccc
Confidence 88875 677899999999999999999999988887 788999999 7775 455555677899999998
Q ss_pred CCCCCCeEee----cC---CCCEE----EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1585 NWPSQPTVFK----GH---TNGIS----GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1585 ~~~~~~~~l~----gH---~~~V~----afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
. ..+.+++ |. .+.+. +||.||+.|.+|-.|+ |++|.+.
T Consensus 264 ~--~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 264 K--AVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred h--hhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 7 3343332 22 11222 5999999999998888 9999874
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=337.20 Aligned_cols=170 Identities=16% Similarity=0.130 Sum_probs=145.2
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
....|....+||+|+.|.||.|+.. .++..||||.+...+... ++.+ ++|+.+|+..+|+|||+
T Consensus 271 P~~~y~~~~kigqgaSG~vy~A~~~------~~~~~VaiK~m~l~~Q~~---keLi-------lnEi~Vm~~~~H~NiVn 334 (550)
T KOG0578|consen 271 PRSKYTDFKKIGQGATGGVYVARKI------STKQEVAIKRMDLRKQPK---KELL-------LNEILVMRDLHHPNIVN 334 (550)
T ss_pred hhhhhcchhhhccccccceeeeeec------cCCceEEEEEEEeccCCc---hhhh-------HHHHHHHHhccchHHHH
Confidence 3457999999999999999999954 577889999998754433 3333 49999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++.|..++.+++|||||+| +|.+++. ...++|.++..+++++++||+|||.+||+|||||.+|||++.+| .+|
T Consensus 335 fl~Sylv~deLWVVMEym~ggsLTDvVt---~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g--~vK 409 (550)
T KOG0578|consen 335 FLDSYLVGDELWVVMEYMEGGSLTDVVT---KTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG--SVK 409 (550)
T ss_pred HHHHhcccceeEEEEeecCCCchhhhhh---cccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC--cEE
Confidence 99999999999999999995 9999997 44589999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
|+|||++........ . ....+|||+|||||++
T Consensus 410 ltDFGFcaqi~~~~~------K-----R~TmVGTPYWMAPEVv 441 (550)
T KOG0578|consen 410 LTDFGFCAQISEEQS------K-----RSTMVGTPYWMAPEVV 441 (550)
T ss_pred EeeeeeeeccccccC------c-----cccccCCCCccchhhh
Confidence 999999986542211 1 1224699999999985
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=292.43 Aligned_cols=282 Identities=19% Similarity=0.280 Sum_probs=235.7
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEE
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHV 1397 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrI 1397 (1678)
.++|+||.+.|.++.|++|.++|+|+|. ||.+.|||.-|......++--..+|-.++|+|.+..+|++ |+...|
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSq----DGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csi 123 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQ----DGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSI 123 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeecc----CCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEE
Confidence 4889999999999999999999999998 9999999999998888888889999999999999999665 999999
Q ss_pred EECCCCc------eeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEE
Q 000316 1398 WNSQTGK------LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1471 (1678)
Q Consensus 1398 WD~~tg~------~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasg 1471 (1678)
|++.+.. ..+.+. +|.+. ++|..|.+ ...|+++
T Consensus 124 y~ls~~d~~g~~~v~r~l~------------------------------gHtgy----------lScC~f~d-D~~ilT~ 162 (343)
T KOG0286|consen 124 YPLSTRDAEGNVRVSRELA------------------------------GHTGY----------LSCCRFLD-DNHILTG 162 (343)
T ss_pred Eecccccccccceeeeeec------------------------------Cccce----------eEEEEEcC-CCceEec
Confidence 9998542 112222 23333 44444444 5689999
Q ss_pred ECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 000316 1472 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1678)
Q Consensus 1472 s~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~ 1551 (1678)
|.|.+.-+||+++|+.+..|.+|.+ .|.++++.|+ +++++++|+.|++.++||+|.+.++++|.
T Consensus 163 SGD~TCalWDie~g~~~~~f~GH~g------DV~slsl~p~----------~~ntFvSg~cD~~aklWD~R~~~c~qtF~ 226 (343)
T KOG0286|consen 163 SGDMTCALWDIETGQQTQVFHGHTG------DVMSLSLSPS----------DGNTFVSGGCDKSAKLWDVRSGQCVQTFE 226 (343)
T ss_pred CCCceEEEEEcccceEEEEecCCcc------cEEEEecCCC----------CCCeEEecccccceeeeeccCcceeEeec
Confidence 9999999999999999999997655 4677777542 56899999999999999999999999999
Q ss_pred ccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEee--cCCCCEE--EEEecCCEEEEEeCCC-eEEEecCC
Q 000316 1552 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK--GHTNGIS--GFSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1552 gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~--gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~ 1625 (1678)
||+..|++|. +|+|.-++|||.|++.++||++.. ..+..+. .-..+|+ +||..|++|.+|..|. +.|||.-.
T Consensus 227 ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD--~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk 304 (343)
T KOG0286|consen 227 GHESDINSVRFFPSGDAFATGSDDATCRLYDLRAD--QELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLK 304 (343)
T ss_pred ccccccceEEEccCCCeeeecCCCceeEEEeecCC--cEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccc
Confidence 9999999999 999999999999999999999997 3444443 2233566 4999999999998888 99999641
Q ss_pred CCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1626 SADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1626 ~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+. .... .. +|.+.|+++..+|||..++|||+|.+||||.
T Consensus 305 -----~e---~vg~----L~--GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 305 -----GE---RVGV----LA--GHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred -----cc---eEEE----ee--ccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 11 1122 22 4999999999999999999999999999994
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=314.57 Aligned_cols=155 Identities=19% Similarity=0.190 Sum_probs=133.4
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN 236 (1678)
++.....|+.+.+||+|.||+||+|+.+ .+++.||+|++....... -+++++++|+++|..|+|+|
T Consensus 12 ~~~~~~~yek~~kigqGtfgeVFkAr~~------n~~kkvalkkvlmeneKe--------GfpitalreikiL~~lkHen 77 (376)
T KOG0669|consen 12 FCDEVSKYEKLAKIGQGTFGEVFKARSK------NTGKKVALKKVLMENEKE--------GFPITALREIKILQLLKHEN 77 (376)
T ss_pred ceecchHHHHHHhcCCchHHHHHHHhhc------CccchhHHHHHHHhcccc--------CCcHHHHHHHHHHHHhcchh
Confidence 4455678999999999999999999965 467778998865422221 25778889999999999999
Q ss_pred ccceeeEEEeC--------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeE
Q 000316 237 VAPVLGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 308 (1678)
Q Consensus 237 IV~l~~~~~~~--------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 308 (1678)
++.+++++.+. ..+|+||.+|+.||..++. +....++..+++.++.+++.||.|+|++.|+|||+||+|+|
T Consensus 78 v~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLs-n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvL 156 (376)
T KOG0669|consen 78 VVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLS-NRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVL 156 (376)
T ss_pred HHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhc-CccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEE
Confidence 99998887543 2699999999999999998 45677999999999999999999999999999999999999
Q ss_pred ecCCCceeEEEEecCCcccC
Q 000316 309 LTDSCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 309 l~~~g~~~lKL~DFGlA~~~ 328 (1678)
|+.+| .+||+|||+||..
T Consensus 157 It~dg--ilklADFGlar~f 174 (376)
T KOG0669|consen 157 ITKDG--ILKLADFGLARAF 174 (376)
T ss_pred EcCCc--eEEeeccccccce
Confidence 99999 9999999999843
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=332.84 Aligned_cols=147 Identities=23% Similarity=0.345 Sum_probs=127.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.++||+|+||.||+|+++ .++..||+|.+...........++. +|+.+|+.++||||+++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDT------HTGEKVAIKKINDVFEHVSDATRIL--------REIKLLRLLRHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEechhhccchhHHHHH--------HHHHHHHhCCCCCEeeecc
Confidence 5999999999999999999965 5688999999875322222333344 8999999999999999999
Q ss_pred EEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 243 ~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++...+ .+|+|||||+++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~ 142 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELMESDLHQVIK--ANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KL 142 (338)
T ss_pred eEeccCCCCCceEEEEEecCCCCHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cE
Confidence 986433 589999999999999998 455689999999999999999999999999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 143 kL~Dfg~~~~ 152 (338)
T cd07859 143 KICDFGLARV 152 (338)
T ss_pred EEccCccccc
Confidence 9999999974
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-33 Score=327.87 Aligned_cols=150 Identities=17% Similarity=0.177 Sum_probs=129.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|.++ .++..||+|.+...........+.+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~iv~~~ 67 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDR------ISEHYYALKVMAIPEVIRLKQEQHVH-------NEKRVLKEVSHPFIIRLF 67 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhhHHHHHHH-------HHHHHHHhCCCCcHhhhH
Confidence 47999999999999999999965 46889999998653222222222222 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--~~kl~ 143 (291)
T cd05612 68 WTEHDQRFLYMLMEYVPGGELFSYLR--NSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIKLT 143 (291)
T ss_pred hhhccCCeEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEE
Confidence 999999999999999985 9999998 455789999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccC
Q 000316 321 DKPLVGFN 328 (1678)
Q Consensus 321 DFGlA~~~ 328 (1678)
|||+++..
T Consensus 144 Dfg~~~~~ 151 (291)
T cd05612 144 DFGFAKKL 151 (291)
T ss_pred ecCcchhc
Confidence 99998743
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=288.66 Aligned_cols=293 Identities=18% Similarity=0.235 Sum_probs=238.1
Q ss_pred eeEEeccccccEEEEEEecCC-CEEEEEecCCCCCCeEEEEeCC-----CCeEEEEEecCCccEEEEeecCCCCcE--Ee
Q 000316 1319 ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELT-----RINCVSGYYGHEEVVNDICVLSSSGRI--AS 1390 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg-~~LaSgS~d~~~DgtVrlWDl~-----tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS 1390 (1678)
+..+++||++.|+.++..+.+ +.+++++. |+++.+|++. .|..++.++||+..|..+..++++.+. +|
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasr----Dk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~s 82 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASR----DKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSAS 82 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEccc----ceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEecc
Confidence 457899999999999999874 68888887 9999999874 577889999999999999999999987 67
Q ss_pred CCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEE
Q 000316 1391 CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470 (1678)
Q Consensus 1391 ~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Las 1470 (1678)
.|+++|+||+.+|+..+.|.+|... |.++++++|+.++++
T Consensus 83 wD~~lrlWDl~~g~~t~~f~GH~~d----------------------------------------Vlsva~s~dn~qivS 122 (315)
T KOG0279|consen 83 WDGTLRLWDLATGESTRRFVGHTKD----------------------------------------VLSVAFSTDNRQIVS 122 (315)
T ss_pred ccceEEEEEecCCcEEEEEEecCCc----------------------------------------eEEEEecCCCceeec
Confidence 7999999999999999999877432 667777788999999
Q ss_pred EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 000316 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l 1550 (1678)
|+.|++|++||+.. .+..+.... ....+|.|++|+|+. +..+|++++.|++|++||+++.+....+
T Consensus 123 GSrDkTiklwnt~g-~ck~t~~~~----~~~~WVscvrfsP~~---------~~p~Ivs~s~DktvKvWnl~~~~l~~~~ 188 (315)
T KOG0279|consen 123 GSRDKTIKLWNTLG-VCKYTIHED----SHREWVSCVRFSPNE---------SNPIIVSASWDKTVKVWNLRNCQLRTTF 188 (315)
T ss_pred CCCcceeeeeeecc-cEEEEEecC----CCcCcEEEEEEcCCC---------CCcEEEEccCCceEEEEccCCcchhhcc
Confidence 99999999999864 444444332 126789999998754 2368999999999999999999999999
Q ss_pred eccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCCeEEEecCCCC
Q 000316 1551 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNKIGLSSLSKSA 1627 (1678)
Q Consensus 1551 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~I~vwdl~~~~ 1627 (1678)
.||.+.|+.++ +|||.+++||+.||.+.+||++.+ +.++.+ +|...|+ +|+|+.-.|+.+.+..|+|||+....
T Consensus 189 ~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~--k~lysl-~a~~~v~sl~fspnrywL~~at~~sIkIwdl~~~~ 265 (315)
T KOG0279|consen 189 IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG--KNLYSL-EAFDIVNSLCFSPNRYWLCAATATSIKIWDLESKA 265 (315)
T ss_pred ccccccEEEEEECCCCCEEecCCCCceEEEEEccCC--ceeEec-cCCCeEeeEEecCCceeEeeccCCceEEEeccchh
Confidence 99999999999 999999999999999999999998 555554 5778888 49999888888887789999986221
Q ss_pred CCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
-.+... .+.... ......-...+++|++||..|..|-.||.|++|
T Consensus 266 ~v~~l~----~d~~g~-s~~~~~~~clslaws~dG~tLf~g~td~~irv~ 310 (315)
T KOG0279|consen 266 VVEELK----LDGIGP-SSKAGDPICLSLAWSADGQTLFAGYTDNVIRVW 310 (315)
T ss_pred hhhhcc----cccccc-ccccCCcEEEEEEEcCCCcEEEeeecCCcEEEE
Confidence 110000 000000 001122345789999999999999999999998
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=331.79 Aligned_cols=151 Identities=16% Similarity=0.127 Sum_probs=131.7
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
..++|++.+.||+|+||.||+|+++ .++..||+|.+.+....... ...+. +|+.+|+.++||||+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv 81 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHK------GTGEYYAIKCLKKREILKMKQVQHVA--------QEKSILMELSHPFIV 81 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH--------HHHHHHHhCCCCCCC
Confidence 3678999999999999999999965 46789999998754322222 22233 899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++.+++.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~ 157 (329)
T PTZ00263 82 NMMCSFQDENRVYFLLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HV 157 (329)
T ss_pred cEEEEEEcCCEEEEEEcCCCCChHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC--CE
Confidence 999999999999999999985 9999998 456789999999999999999999999999999999999999999 89
Q ss_pred EEEecCCcccC
Q 000316 318 YICDKPLVGFN 328 (1678)
Q Consensus 318 KL~DFGlA~~~ 328 (1678)
||+|||+++..
T Consensus 158 kl~Dfg~~~~~ 168 (329)
T PTZ00263 158 KVTDFGFAKKV 168 (329)
T ss_pred EEeeccCceEc
Confidence 99999999743
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=306.25 Aligned_cols=288 Identities=18% Similarity=0.274 Sum_probs=251.5
Q ss_pred ccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCC
Q 000316 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1277 ~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dg 1353 (1678)
+.+.||...|+. |.|+-.. ++++|.|.++++||.. |++...++||.++|.+|+|+..|++++++|. |-
T Consensus 102 ~~l~g~r~~vt~v~~hp~~~~-----v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSs----Dl 172 (406)
T KOG0295|consen 102 QKLAGHRSSVTRVIFHPSEAL-----VVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSS----DL 172 (406)
T ss_pred hhhhccccceeeeeeccCceE-----EEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCC----cc
Confidence 445667777876 7777665 8999999999999988 8899999999999999999999999999998 78
Q ss_pred eEEEEeCCC-CeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccc
Q 000316 1354 TVQKWELTR-INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1678)
Q Consensus 1354 tVrlWDl~t-g~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~ 1430 (1678)
.+++||..+ -+|++.+.||+..|.+|+|.|.+.++.|| |.+|+.||+.+|-++.++.+|+
T Consensus 173 ~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~----------------- 235 (406)
T KOG0295|consen 173 SAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHS----------------- 235 (406)
T ss_pred chhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCch-----------------
Confidence 899999987 57888899999999999999999999666 9999999999999999998763
Q ss_pred cccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEee
Q 000316 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1678)
Q Consensus 1431 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1510 (1678)
..|..++++.||..+++++.|.+|++|-+.++++...++.|.. .|.|++|.
T Consensus 236 -----------------------ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh------~vEci~wa 286 (406)
T KOG0295|consen 236 -----------------------EWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEH------PVECIAWA 286 (406)
T ss_pred -----------------------HhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhcccc------ceEEEEec
Confidence 1366777778899999999999999999999988888886643 47888887
Q ss_pred CCCccccCcccC-----CCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCC
Q 000316 1511 GSEKMQAGGAVA-----SPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRR 1584 (1678)
Q Consensus 1511 ~~~~~s~dg~~p-----~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~ 1584 (1678)
+.... ++-.-. .+.++++|+.|++|++||+.+|.++.++.||..+|..++ +|.|++|+|+..|++++|||+++
T Consensus 287 p~~~~-~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~ 365 (406)
T KOG0295|consen 287 PESSY-PSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKN 365 (406)
T ss_pred ccccC-cchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEecc
Confidence 65542 222112 346999999999999999999999999999999999999 99999999999999999999999
Q ss_pred CCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1585 NWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1585 ~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
. +++.++..|..-|++ |..+..+++||+-|. +++|.
T Consensus 366 ~--~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 366 L--QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred c--eeeeccCCCcceeEEEecCCCCceEEeccccceeeeee
Confidence 8 778889999998885 666778999999998 99996
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=331.98 Aligned_cols=175 Identities=19% Similarity=0.196 Sum_probs=147.3
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 237 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNI 237 (1678)
.....|++.+.||+|.||.||+|+++ .+|..+|+|.+.+.........+.++ +|+.+|+++. ||||
T Consensus 32 ~~~~~Y~l~~~lG~G~Fg~v~~~~~~------~tg~~~A~K~i~k~~~~~~~~~~~v~-------~Ev~il~~l~~hpni 98 (382)
T KOG0032|consen 32 DIKEKYELGRELGRGQFGVVYLCREK------STGKEVACKVIPKRKLRGKEDREDVR-------REVAILQQLSGHPNI 98 (382)
T ss_pred cccccEEehhhhCCCCceEEEEEEec------CCCceeEEEEeehhhccccccHHHHH-------HHHHHHHhccCCCCE
Confidence 34568999999999999999999975 46899999999886655443333443 9999999998 9999
Q ss_pred cceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc--
Q 000316 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-- 314 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-- 314 (1678)
|.++++|++.+.+++|||+|.| +|++.|... .+++.++..++.|++.|+.|||+.||+||||||||+|+.....
T Consensus 99 v~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~ 175 (382)
T KOG0032|consen 99 VQLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGS 175 (382)
T ss_pred EEEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCC
Confidence 9999999999999999999995 999999854 3999999999999999999999999999999999999986532
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
..+|++|||+|+.... . .......||+.|+|||++
T Consensus 176 ~~ik~~DFGla~~~~~-~-----------~~~~~~~Gtp~y~APEvl 210 (382)
T KOG0032|consen 176 GRIKLIDFGLAKFIKP-G-----------ERLHTIVGTPEYVAPEVL 210 (382)
T ss_pred CcEEEeeCCCceEccC-C-----------ceEeeecCCccccCchhh
Confidence 3799999999997653 1 112233488999999885
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=330.65 Aligned_cols=142 Identities=21% Similarity=0.198 Sum_probs=124.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|+++ .++..||+|++.+...... ....++ +|+.+|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05571 1 KLLGKGTFGKVILVREK------ATGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLQNTRHPFLTALKYSFQT 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCCCEEEEEEc
Confidence 46999999999999965 5788999999975432222 222333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a 142 (323)
T cd05571 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEeeCCCC
Confidence 9999999999995 9999987 456789999999999999999999999999999999999999999 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 143 ~~ 144 (323)
T cd05571 143 KE 144 (323)
T ss_pred cc
Confidence 74
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=343.15 Aligned_cols=147 Identities=21% Similarity=0.245 Sum_probs=124.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|.+. .++..||||++..... ... +|+.+|+.++|||||++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~-------~~~-------~Ei~il~~l~h~niv~l 124 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICI------DTSEKVAIKKVLQDPQ-------YKN-------RELLIMKNLNHINIIFL 124 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEecCcc-------hHH-------HHHHHHHhcCCCCCcce
Confidence 457999999999999999999964 4678999999864321 111 79999999999999999
Q ss_pred eeEEEeC--------CeEEEeccCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec
Q 000316 241 LGLLKTS--------GLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1678)
Q Consensus 241 ~~~~~~~--------~~~~lVmEy~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 310 (1678)
+++|... ..+++||||++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID 204 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc
Confidence 9987542 25779999999999888763 2456789999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCcccC
Q 000316 311 DSCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~~ 328 (1678)
.++ ..+||+|||+|+..
T Consensus 205 ~~~-~~vkL~DFGla~~~ 221 (440)
T PTZ00036 205 PNT-HTLKLCDFGSAKNL 221 (440)
T ss_pred CCC-Cceeeeccccchhc
Confidence 665 16999999999853
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=321.31 Aligned_cols=178 Identities=13% Similarity=0.141 Sum_probs=147.8
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN 236 (1678)
.-++.+-|.+.+.||+|-|++|-+|++. -+|..||||++.+.+.........+ +|++.|+.++|||
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHV------FTGekVAVKviDKTKlD~~st~hlf--------qEVRCMKLVQHpN 78 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHV------FTGEKVAVKVIDKTKLDTLSTGHLF--------QEVRCMKLVQHPN 78 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhh------cccceeEEEEecccccchhhhhHHH--------HHHHHHHHhcCcC
Confidence 3445667999999999999999999976 4889999999999887766555554 8999999999999
Q ss_pred ccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
||+||++..+...+|||+|+-+| +|+++|.+. ...+.|..++.|+.||+.|+.|||+..||||||||||+.+-+.. +
T Consensus 79 iVRLYEViDTQTKlyLiLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl-G 156 (864)
T KOG4717|consen 79 IVRLYEVIDTQTKLYLILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL-G 156 (864)
T ss_pred eeeeeehhcccceEEEEEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec-C
Confidence 99999999999999999999985 999999854 45589999999999999999999999999999999998776543 2
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
-+||+|||++....... ...+.| |+..|.|||++.
T Consensus 157 lVKLTDFGFSNkf~PG~------kL~TsC------GSLAYSAPEILL 191 (864)
T KOG4717|consen 157 LVKLTDFGFSNKFQPGK------KLTTSC------GSLAYSAPEILL 191 (864)
T ss_pred ceEeeeccccccCCCcc------hhhccc------chhhccCchhhh
Confidence 89999999987544211 112222 567788887754
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=321.03 Aligned_cols=149 Identities=18% Similarity=0.262 Sum_probs=128.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|+++ .++..+|+|++............+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHK------ETKEIVAIKKFKDSEENEEVKETTL--------RELKMLRTLKQENIVELK 66 (287)
T ss_pred CCceEEEEecccCCEEEEEEEEC------CCCcEEEEEEEecccccccchhhHH--------HHHHHHHhCCCccccchh
Confidence 36999999999999999999975 4678999999876433332223333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+++..++.+|+||||+++++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~--~~kl~D 143 (287)
T cd07848 67 EAFRRRGKLYLVFEYVEKNMLELLEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND--VLKLCD 143 (287)
T ss_pred hhEecCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEEee
Confidence 99999999999999999866665553 345689999999999999999999999999999999999999999 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 144 fg~~~~ 149 (287)
T cd07848 144 FGFARN 149 (287)
T ss_pred ccCccc
Confidence 999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=323.17 Aligned_cols=360 Identities=22% Similarity=0.275 Sum_probs=263.8
Q ss_pred CCCceE--eecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCC--EEEEEecCCCCCCeEE
Q 000316 1282 CEPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKGTVQ 1356 (1678)
Q Consensus 1282 H~~~V~--~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~--~LaSgS~d~~~DgtVr 1356 (1678)
|++.|. +|+|.|.+ +++|+.|+.+++||+. +.+.+.|+||.|.|.++.|+|+.. .|++|+. |++|+
T Consensus 104 He~Pvi~ma~~~~g~L-----lAtggaD~~v~VWdi~~~~~th~fkG~gGvVssl~F~~~~~~~lL~sg~~----D~~v~ 174 (775)
T KOG0319|consen 104 HEAPVITMAFDPTGTL-----LATGGADGRVKVWDIKNGYCTHSFKGHGGVVSSLLFHPHWNRWLLASGAT----DGTVR 174 (775)
T ss_pred cCCCeEEEEEcCCCce-----EEeccccceEEEEEeeCCEEEEEecCCCceEEEEEeCCccchhheeecCC----CceEE
Confidence 787776 49998876 9999999999999999 779999999999999999999875 4788876 99999
Q ss_pred EEeCCCC-eEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCcc------------------
Q 000316 1357 KWELTRI-NCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD------------------ 1415 (1678)
Q Consensus 1357 lWDl~tg-~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~------------------ 1415 (1678)
+||+.+. .|+.++.+|...|++++|.+++..+ ++.|+.+.+||+.+-++.+++..-...
T Consensus 175 vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~ 254 (775)
T KOG0319|consen 175 VWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYII 254 (775)
T ss_pred EEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEE
Confidence 9999854 4588889999999999999997776 555999999998755443333210000
Q ss_pred -------ccc-----------cCCC-C-----------CCcc-cccccc-cccc---------ccCCCCCCeEEeeecC-
Q 000316 1416 -------SLH-----------GGSP-S-----------SSIS-KINTDQ-VGML---------NSNTLSSGILSTAFDG- 1453 (1678)
Q Consensus 1416 -------~~~-----------~~s~-s-----------~~~~-~~~~~~-~~~~---------~~~~~s~~v~sv~f~~- 1453 (1678)
... ...+ + .... .+...+ .-++ ...+...+|..+.|-+
T Consensus 255 TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~ 334 (775)
T KOG0319|consen 255 TAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGP 334 (775)
T ss_pred EecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCC
Confidence 000 0000 0 0000 000000 0000 0112233343333322
Q ss_pred -------------------------------CceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCC
Q 000316 1454 -------------------------------NLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1678)
Q Consensus 1454 -------------------------------~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~ 1502 (1678)
..+.+++...+|-.+++|+.|+++++|.++.+........ ...+|..
T Consensus 335 e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a--~~~gH~~ 412 (775)
T KOG0319|consen 335 EESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVA--QANGHTN 412 (775)
T ss_pred ccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhh--hhccccc
Confidence 2245556556778999999999999998854432211111 1124677
Q ss_pred cceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc-----EE----EEEeccCCCeEEEE-cCCCCEEEEEe
Q 000316 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-----VI----ASWRAHDGYVTKLA-APEDHLLVSSS 1572 (1678)
Q Consensus 1503 ~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~-----~i----~~l~gH~~~V~sva-spdg~~LaSgS 1572 (1678)
.|.+|+++... ..+++++|.|+++++|++...+ .+ .+-..|+..|++|+ +|+++++||||
T Consensus 413 svgava~~~~~----------asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~S 482 (775)
T KOG0319|consen 413 SVGAVAGSKLG----------ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGS 482 (775)
T ss_pred ccceeeecccC----------ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecc
Confidence 78899885322 2699999999999999997622 11 13348999999999 99999999999
Q ss_pred CCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCc
Q 000316 1573 LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKN 1649 (1678)
Q Consensus 1573 ~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h 1649 (1678)
.|++.+||++... ....++.||+.+|++ |++..+.++|+|.|+ |++|.++. ++..+.++ +|
T Consensus 483 qDktaKiW~le~~--~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~---------fSClkT~e-----GH 546 (775)
T KOG0319|consen 483 QDKTAKIWDLEQL--RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIST---------FSCLKTFE-----GH 546 (775)
T ss_pred cccceeeecccCc--eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecc---------ceeeeeec-----Cc
Confidence 9999999999966 677899999999996 999999999999999 99999861 12233332 59
Q ss_pred cCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1650 LSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1650 ~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
...|..++|-.+++.|++|+.||.|++|+
T Consensus 547 ~~aVlra~F~~~~~qliS~~adGliKlWn 575 (775)
T KOG0319|consen 547 TSAVLRASFIRNGKQLISAGADGLIKLWN 575 (775)
T ss_pred cceeEeeeeeeCCcEEEeccCCCcEEEEe
Confidence 99999999999999999999999999995
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=329.42 Aligned_cols=153 Identities=19% Similarity=0.192 Sum_probs=130.7
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.++. ..+..||+|.+.+.........+.+ .+|+.+++.++||||++
T Consensus 28 ~~~~y~~~~~ig~G~~g~Vy~a~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~-------~~E~~~l~~l~hp~Iv~ 95 (340)
T PTZ00426 28 KYEDFNFIRTLGTGSFGRVILATYKN-----EDFPPVAIKRFEKSKIIKQKQVDHV-------FSERKILNYINHPFCVN 95 (340)
T ss_pred ChhhcEEEEEEeecCCeEEEEEEEEC-----CCCeEEEEEEEEHHHhhhhhhHHHH-------HHHHHHHHhCCCCCCcc
Confidence 36789999999999999999998531 2346899999875433222222222 28999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++.+++.+|+||||++ |+|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 96 ~~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~ik 171 (340)
T PTZ00426 96 LYGSFKDESYLYLVLEFVIGGEFFTFLR--RNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FIK 171 (340)
T ss_pred eEEEEEeCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEE
Confidence 9999999999999999998 59999998 456789999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccC
Q 000316 319 ICDKPLVGFN 328 (1678)
Q Consensus 319 L~DFGlA~~~ 328 (1678)
|+|||+++..
T Consensus 172 L~DFG~a~~~ 181 (340)
T PTZ00426 172 MTDFGFAKVV 181 (340)
T ss_pred EecCCCCeec
Confidence 9999999753
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=311.73 Aligned_cols=176 Identities=19% Similarity=0.151 Sum_probs=150.4
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
..+++|..++.||+|+||.|.+|+.+ .+++.+|||++++.-....+..... +.|-++|+..+||.+.
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEK------at~k~YAiKIlkKeviiakdEVAHT-------lTE~RVL~~~~HPFLt 231 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREK------ATGKLYAIKILKKEVIIAKDEVAHT-------LTENRVLQNCRHPFLT 231 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeec------ccCceeehhhhhhhheeehHHhhhh-------hhHHHHHHhccCcHHH
Confidence 35789999999999999999999965 6899999999998655554433222 3899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
.|...|++.+.+|+||||+.| .|+-.+. +...+++..+++|-.+|+.||.|||+++||.||||.+|+|++.+| ++
T Consensus 232 ~LKYsFQt~drlCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG--HI 307 (516)
T KOG0690|consen 232 SLKYSFQTQDRLCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG--HI 307 (516)
T ss_pred HhhhhhccCceEEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--ce
Confidence 999999999999999999995 9988887 577899999999999999999999999999999999999999999 99
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
||+|||+++..... ..+..+-| |||.|.|||++.
T Consensus 308 KitDFGLCKE~I~~-----g~t~kTFC------GTPEYLAPEVle 341 (516)
T KOG0690|consen 308 KITDFGLCKEEIKY-----GDTTKTFC------GTPEYLAPEVLE 341 (516)
T ss_pred Eeeecccchhcccc-----cceecccc------CChhhcCchhhc
Confidence 99999999964422 12222333 789999998863
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-32 Score=320.22 Aligned_cols=151 Identities=22% Similarity=0.244 Sum_probs=125.3
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC---CCCccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVA 238 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l---~HpNIV 238 (1678)
.+|++++.||+|+||.||+|++.. ..+..+|+|.+............+. +|+.+++.+ +||||+
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~hpniv 67 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLK-----NGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFEHPNVV 67 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcC-----CCCeEEEEEEEecccCCCCchHHHH--------HHHHHHHhhcccCCCCcc
Confidence 369999999999999999998632 3467899999875433322222333 666666555 799999
Q ss_pred ceeeEEEe-----CCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 239 PVLGLLKT-----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 239 ~l~~~~~~-----~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
++++++.. ...+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 68 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 147 (290)
T ss_pred eEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC
Confidence 99999862 4568999999999999999865556689999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 148 --~~kl~Dfg~~~~ 159 (290)
T cd07862 148 --QIKLADFGLARI 159 (290)
T ss_pred --CEEEccccceEe
Confidence 899999999974
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-32 Score=319.65 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=129.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.|+..+.||+|+||.||+|.+. .+++.||+|.+.+....... ...+. +|+.+|+.++|+||++++
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~iv~~~ 66 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKRILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEe------cCCceEEEEEeeHhhhhhhhhHHHHH--------HHHHHHHhcCCCcEEEEE
Confidence 3889999999999999999965 47889999998754332222 12233 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+++||||++ |+|.+++.......+++..+..++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~--~~kl~ 144 (285)
T cd05631 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG--HIRIS 144 (285)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 99999999999999999 4998888654455689999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 145 Dfg~~~~ 151 (285)
T cd05631 145 DLGLAVQ 151 (285)
T ss_pred eCCCcEE
Confidence 9999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.1e-34 Score=320.19 Aligned_cols=207 Identities=17% Similarity=0.246 Sum_probs=177.2
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...+|++.+.||+|+||.|-+|.+. ..|+.||||.|+++++..+...-.++ |||+||..|+||||+.
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~------~sgR~VAiKsIrKdkIkdeqDlvhIR-------REIeIMSsLNHPhII~ 117 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEH------KSGREVAIKSIRKDKIKDEQDLVHIR-------REIEIMSSLNHPHIIQ 117 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhc------cCCcEeehhhhhhhhcccHHHHHHHH-------HHHHHHhhcCCCceee
Confidence 3458999999999999999999965 47899999999998876654444444 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+|++|+..+.+.|||||.. |+|+++|. ..+.+++.+++.+++||++|+.|||.++|+|||||.+|||+|.++ .+|
T Consensus 118 IyEVFENkdKIvivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~--NiK 193 (668)
T KOG0611|consen 118 IYEVFENKDKIVIVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN--NIK 193 (668)
T ss_pred hhhhhcCCceEEEEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC--Cee
Confidence 9999999999999999999 59999998 677899999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccccc-ccccccccCccchhhhHhhhccccCCCCC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWH-SQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~-~~~d~W~~G~isnfeyL~~ln~~aGRs~~ 396 (1678)
|+|||++....... ...++| |+|.|++||++.+.+|. +.+|-|+.|.+. |-.+...-+|.||.++
T Consensus 194 IADFGLSNly~~~k-----------fLqTFC-GSPLYASPEIvNG~PY~GPEVDsWsLGvLL-YtLVyGtMPFDG~Dhk 259 (668)
T KOG0611|consen 194 IADFGLSNLYADKK-----------FLQTFC-GSPLYASPEIVNGTPYKGPEVDSWSLGVLL-YTLVYGTMPFDGRDHK 259 (668)
T ss_pred eeccchhhhhcccc-----------HHHHhc-CCcccCCccccCCCCCCCCccchhhHHHHH-HHHhhcccccCCchHH
Confidence 99999997543210 112334 68899999999999995 599999999775 5555556677777654
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=8.6e-31 Score=280.14 Aligned_cols=263 Identities=20% Similarity=0.305 Sum_probs=225.4
Q ss_pred CeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe--EEEEEecCCcc
Q 000316 1299 DFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEV 1375 (1678)
Q Consensus 1299 ~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~--~l~~l~gH~~~ 1375 (1678)
-+|+|+|.|.+||+|.+. |.|.+++.-..+.|+.+...||++.||+|+. ..||+||+.+++ ++.+|.+|++.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-----qhvRlyD~~S~np~Pv~t~e~h~kN 85 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-----QHVRLYDLNSNNPNPVATFEGHTKN 85 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-----CeeEEEEccCCCCCceeEEeccCCc
Confidence 459999999999999988 8999999977889999999999999999994 899999998875 58999999999
Q ss_pred EEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecC
Q 000316 1376 VNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDG 1453 (1678)
Q Consensus 1376 V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~ 1453 (1678)
|++|.|..+++.+ +|.||++||||++.-.+.+.++..
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~----------------------------------------- 124 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN----------------------------------------- 124 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCC-----------------------------------------
Confidence 9999999999988 455999999999986665555421
Q ss_pred CceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecC
Q 000316 1454 NLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSS 1533 (1678)
Q Consensus 1454 ~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~D 1533 (1678)
..|+++..+|+...|++|..+|.|++||++...+.+.+..... ..|.++++. ++|.+++++...
T Consensus 125 spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~-----~~i~sl~v~-----------~dgsml~a~nnk 188 (311)
T KOG0315|consen 125 SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDD-----TSIQSLTVM-----------PDGSMLAAANNK 188 (311)
T ss_pred CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCC-----cceeeEEEc-----------CCCcEEEEecCC
Confidence 2255666667788999999999999999998877776654432 346666653 677899999999
Q ss_pred CeEEEEeCCCC------cEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEE
Q 000316 1534 GQCRLFDVRSG------NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFS 1604 (1678)
Q Consensus 1534 g~I~lWD~~tg------~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afS 1604 (1678)
|++++|++-++ .++.++++|.+.+..+. +||+++||++|.|.+++||+..+. .+....++||..+|+ +||
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kle~~l~gh~rWvWdc~FS 267 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKLELVLTGHQRWVWDCAFS 267 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eeeEEEeecCCceEEeeeec
Confidence 99999999764 36677899999999988 999999999999999999999886 344568899999999 499
Q ss_pred ecCCEEEEEeCCC-eEEEecC
Q 000316 1605 VWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1605 pdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
.||++|++|+.|+ +++|+++
T Consensus 268 ~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 268 ADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred cCccEEEecCCCCceeecccc
Confidence 9999999999999 9999986
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-32 Score=334.96 Aligned_cols=180 Identities=14% Similarity=0.147 Sum_probs=144.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|++. .+++.||+|..... ... +|+++|+.++|||||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~------~~~~~vaiK~~~~~--------~~~--------~E~~il~~l~HpnIv~~ 148 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDN------KTCEHVVIKAGQRG--------GTA--------TEAHILRAINHPSIIQL 148 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEEC------CCCCEEEEechhhh--------hhH--------HHHHHHHhCCCCCCCCE
Confidence 457999999999999999999975 57889999975321 122 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++|..+...++|||++.++|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 149 ~~~~~~~~~~~lv~e~~~~~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~--~vkL~ 224 (391)
T PHA03212 149 KGTFTYNKFTCLILPRYKTDLYCYLA--AKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG--DVCLG 224 (391)
T ss_pred eEEEEECCeeEEEEecCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC--CEEEE
Confidence 99999999999999999999999987 345688999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccC
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
|||+|+........ ......||+.|+|||++.+..|+.++|+|+.|
T Consensus 225 DFG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 270 (391)
T PHA03212 225 DFGAACFPVDINAN----------KYYGWAGTIATNAPELLARDPYGPAVDIWSAG 270 (391)
T ss_pred eCCccccccccccc----------ccccccCccCCCChhhhcCCCCCcHHHHHHHH
Confidence 99999743211000 00112366677777765554444455555555
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-31 Score=330.06 Aligned_cols=147 Identities=27% Similarity=0.362 Sum_probs=128.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|+++++||+|+||.||+|.+. .++..||+|.+..........+++. +|+.+|+.++||||+++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDP------RDGKRVALKKMPNVFQNLVSCKRVF--------RELKMLCFFKHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEEC------CCCCEEEEEeccccccchHHHHHHH--------HHHHHHHhCCCCCcCCHhh
Confidence 4788999999999999999964 4688999999865322222333343 8999999999999999999
Q ss_pred EEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 243 ~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++...+ .+|+||||+.++|.+.+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~--~~ 142 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIV--SPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC--VL 142 (372)
T ss_pred eecCCCccccceEEEEeeccccCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC--CE
Confidence 998876 899999999999999887 456789999999999999999999999999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 143 kL~Dfg~a~~ 152 (372)
T cd07853 143 KICDFGLARV 152 (372)
T ss_pred Eeccccceee
Confidence 9999999874
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.9e-32 Score=322.16 Aligned_cols=140 Identities=21% Similarity=0.253 Sum_probs=122.6
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
||+|+||.||+|++. .++..||+|.+.+..... .....+. +|+.+|+.++||||+++++++.+++
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~~ 66 (312)
T cd05585 1 IGKGSFGKVMQVRKR------DTQRIYALKTIRKAHIVSRSEVTHTL--------AERTVLAQVNCPFIVPLKFSFQSPE 66 (312)
T ss_pred CCcCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCcEeceeeEEecCC
Confidence 799999999999964 467899999987533222 2223333 8999999999999999999999999
Q ss_pred eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~ 142 (312)
T cd05585 67 KLYLVLAFINGGELFHHLQ--REGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIALCDFGLCKL 142 (312)
T ss_pred eEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC--cEEEEECccccc
Confidence 99999999995 9999998 456789999999999999999999999999999999999999999 899999999874
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.5e-31 Score=292.94 Aligned_cols=295 Identities=21% Similarity=0.316 Sum_probs=245.6
Q ss_pred EeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC-
Q 000316 1313 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC- 1391 (1678)
Q Consensus 1313 Wd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~- 1391 (1678)
|...-+..+.+.||.+.|+||++.|-.+.++|||. |++|+|||+++|+...++.||-..|..|++++-..++.|+
T Consensus 137 WHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~----DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~g 212 (460)
T KOG0285|consen 137 WHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSA----DRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAG 212 (460)
T ss_pred ccCcceehhhhhhccceEEEEeeCCCceeEEecCC----CceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEec
Confidence 44444567889999999999999999999999998 9999999999999999999999999999999988898554
Q ss_pred -CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEE
Q 000316 1392 -DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470 (1678)
Q Consensus 1392 -DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Las 1470 (1678)
|+.|+.||+..++.++.+-+|-. .|.|++.+|.-..+++
T Consensus 213 edk~VKCwDLe~nkvIR~YhGHlS----------------------------------------~V~~L~lhPTldvl~t 252 (460)
T KOG0285|consen 213 EDKQVKCWDLEYNKVIRHYHGHLS----------------------------------------GVYCLDLHPTLDVLVT 252 (460)
T ss_pred CCCeeEEEechhhhhHHHhccccc----------------------------------------eeEEEeccccceeEEe
Confidence 99999999999998887766521 2667777777889999
Q ss_pred EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEE
Q 000316 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l 1550 (1678)
|+.|.++|+||+++...++.+.||... |..|.+.+ -..-+++||.|++|++||++.|+.+.++
T Consensus 253 ~grDst~RvWDiRtr~~V~~l~GH~~~------V~~V~~~~-----------~dpqvit~S~D~tvrlWDl~agkt~~tl 315 (460)
T KOG0285|consen 253 GGRDSTIRVWDIRTRASVHVLSGHTNP------VASVMCQP-----------TDPQVITGSHDSTVRLWDLRAGKTMITL 315 (460)
T ss_pred cCCcceEEEeeecccceEEEecCCCCc------ceeEEeec-----------CCCceEEecCCceEEEeeeccCceeEee
Confidence 999999999999999999999987654 55555432 1236999999999999999999999999
Q ss_pred eccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecC-CEEEEEeCCC-eEEEecCCCC
Q 000316 1551 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG-QDVISISNNK-IGLSSLSKSA 1627 (1678)
Q Consensus 1551 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg-~~LaSgs~D~-I~vwdl~~~~ 1627 (1678)
..|+..|.+++ +|....+||+|.| .|+-|++..+ ..+..+.+|+..|++++.+. ..+++|++++ +.+||..
T Consensus 316 t~hkksvral~lhP~e~~fASas~d-nik~w~~p~g--~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwk--- 389 (460)
T KOG0285|consen 316 THHKKSVRALCLHPKENLFASASPD-NIKQWKLPEG--EFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWK--- 389 (460)
T ss_pred ecccceeeEEecCCchhhhhccCCc-cceeccCCcc--chhhccccccceeeeeeeccCceEEEcCCceEEEEEecC---
Confidence 99999999999 9999999999987 7899999988 55667999999999877664 5778888888 9999975
Q ss_pred CCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
+|......+.+.... .......|.+.+|...|..|+||..|.+|++|
T Consensus 390 --sg~nyQ~~~t~vqpG-Sl~sEagI~as~fDktg~rlit~eadKtIk~~ 436 (460)
T KOG0285|consen 390 --SGHNYQRGQTIVQPG-SLESEAGIFASCFDKTGSRLITGEADKTIKMY 436 (460)
T ss_pred --cCcccccccccccCC-ccccccceeEEeecccCceEEeccCCcceEEE
Confidence 222222222221111 11234579999999999999999999999998
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-31 Score=317.81 Aligned_cols=149 Identities=21% Similarity=0.271 Sum_probs=130.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+++++||+|+||.||+|+++ .++..+|+|.++...... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVTL 69 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEec------CCCCeEEEEEeeccccCC-cchhHH--------HHHHHHHhCCCCCcceE
Confidence 578999999999999999999965 467889999987543221 122233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++..++..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 146 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLDKDLKQYMDD-CGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (309)
T ss_pred EEEEeeCCeEEEEEeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 999999999999999999999998874 344578999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 147 Dfg~~~~ 153 (309)
T cd07872 147 DFGLARA 153 (309)
T ss_pred cccccee
Confidence 9999873
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=322.15 Aligned_cols=142 Identities=22% Similarity=0.187 Sum_probs=124.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|++. .++..||+|++.+..... .....+. +|+.+|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~~~~~~~~ 66 (328)
T cd05593 1 KLLGKGTFGKVILVREK------ASGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLKNTRHPFLTSLKYSFQT 66 (328)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCcceEEEEEc
Confidence 46999999999999965 568899999997643222 2223333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
++.+|+||||+++ +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~Ey~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DfG~~ 142 (328)
T cd05593 67 KDRLCFVMEYVNGGELFFHLS--RERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKITDFGLC 142 (328)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC--cEEEecCcCC
Confidence 9999999999995 9988887 456789999999999999999999999999999999999999999 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 143 ~~ 144 (328)
T cd05593 143 KE 144 (328)
T ss_pred cc
Confidence 74
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=327.36 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=140.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|++. .++..+|+|.+.+...........+. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~il~~~~h~~iv~~ 108 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHK------SSKQVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAHANSEWIVQL 108 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCcceE
Confidence 568999999999999999999965 46889999999753322222222232 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++.+|+||||++| +|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~~kL 183 (370)
T cd05596 109 HYAFQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (370)
T ss_pred EEEEecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999984 99999873 3578999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
+|||+++........ ......||+.|||||++
T Consensus 184 ~DfG~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~ 215 (370)
T cd05596 184 ADFGTCMKMDANGMV----------RCDTAVGTPDYISPEVL 215 (370)
T ss_pred EeccceeeccCCCcc----------cCCCCCCCcCeECHHHh
Confidence 999999753311000 00112367778887764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-30 Score=295.36 Aligned_cols=377 Identities=16% Similarity=0.148 Sum_probs=278.7
Q ss_pred cccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCe
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1278 ~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dgt 1354 (1678)
.+.||+-.|.+ |-|.-.+ .++|||.|.+|.+|+-. -+.-.+++.|+.-|+||.|+|||.+++|+|. ||+
T Consensus 142 ei~GhSr~ins~~~KpsRPf----Ri~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs----Dgk 213 (603)
T KOG0318|consen 142 EITGHSRRINSVDFKPSRPF----RIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS----DGK 213 (603)
T ss_pred eeeccceeEeeeeccCCCce----EEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC----Ccc
Confidence 46789888886 5554443 39999999999998844 4567788999999999999999999999997 999
Q ss_pred EEEEeCCCCeEEEEEe---cCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCcc--c--cccCCCCCC
Q 000316 1355 VQKWELTRINCVSGYY---GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD--S--LHGGSPSSS 1425 (1678)
Q Consensus 1355 VrlWDl~tg~~l~~l~---gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~--~--~~~~s~s~~ 1425 (1678)
|.+||-.+|+.+..+. +|++.|++++|+||+.++ +|.|+++||||+.++++++++...... . ......+.-
T Consensus 214 i~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~l 293 (603)
T KOG0318|consen 214 IYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHL 293 (603)
T ss_pred EEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeE
Confidence 9999999999999998 899999999999999998 667999999999999999999865431 1 111111111
Q ss_pred ccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeee-----------EEeeCC
Q 000316 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL-----------HLWRGE 1494 (1678)
Q Consensus 1426 ~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l-----------~~l~~~ 1494 (1678)
..+...+..+.++....+ ....+.=+...++++..++++++|++|+.||.|.-||..+|..- ..+..+
T Consensus 294 ItVSl~G~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~ 372 (603)
T KOG0318|consen 294 ITVSLSGTINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAAS 372 (603)
T ss_pred EEEEcCcEEEEecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeec
Confidence 111222223333333333 44444456667999999999999999999999999999876422 111111
Q ss_pred C-C---ccc----------------------CCCcceEEEeeCCCc---------------------------cccCccc
Q 000316 1495 P-T---ELG----------------------FPSLVSAICACGSEK---------------------------MQAGGAV 1521 (1678)
Q Consensus 1495 ~-~---~v~----------------------~~~~V~sva~~~~~~---------------------------~s~dg~~ 1521 (1678)
. + .++ ....-.++|...... -++....
T Consensus 373 ~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~ 452 (603)
T KOG0318|consen 373 ESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVS 452 (603)
T ss_pred CCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEc
Confidence 0 0 000 011111222222210 0122345
Q ss_pred CCCCEEEEEecCCeEEEEeCCCCc--EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCC
Q 000316 1522 ASPSWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN 1598 (1678)
Q Consensus 1522 p~g~~LasGs~Dg~I~lWD~~tg~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~ 1598 (1678)
|+++.+|.|+.||.|++|.+..+. .......|.++|++|+ +||+.+||+|...+.|.+||+.+... ......-|+.
T Consensus 453 ~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~-~~~~w~FHta 531 (603)
T KOG0318|consen 453 PDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREV-KTNRWAFHTA 531 (603)
T ss_pred CCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCce-ecceeeeeee
Confidence 788999999999999999998654 3345567999999999 99999999999999999999998753 3445666999
Q ss_pred CEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEE
Q 000316 1599 GIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLR 1675 (1678)
Q Consensus 1599 ~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~Ir 1675 (1678)
.|. +|||+..++||||-|. |.||++.++.+. -.+ .+ .|...|+.+.|. |...+++.|.|-.||
T Consensus 532 kI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~--------i~i----kn-AH~~gVn~v~wl-de~tvvSsG~Da~iK 597 (603)
T KOG0318|consen 532 KINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKH--------III----KN-AHLGGVNSVAWL-DESTVVSSGQDANIK 597 (603)
T ss_pred eEEEEEeCCCceEEEeccccceEEEEEccChhhh--------eEe----cc-ccccCceeEEEe-cCceEEeccCcceeE
Confidence 999 4999999999999999 999999743211 111 12 477779999997 556788899999999
Q ss_pred EcC
Q 000316 1676 LCC 1678 (1678)
Q Consensus 1676 Iwd 1678 (1678)
+|.
T Consensus 598 ~W~ 600 (603)
T KOG0318|consen 598 VWN 600 (603)
T ss_pred Eec
Confidence 994
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-32 Score=318.29 Aligned_cols=171 Identities=16% Similarity=0.201 Sum_probs=146.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
..|+.++.||+|+||.||+|.+. .+++.||+|++....... ...+.. +|+.+|.+++++||.++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~------~t~k~vAiKii~Le~~~d-eIediq--------qei~~Ls~~~~~~it~yy 77 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDN------KTKKVVAIKIIDLEEAED-EIEDIQ--------QEISVLSQCDSPNITEYY 77 (467)
T ss_pred cccccchhccccccceeeeeeec------cccceEEEEEechhhcch-hhHHHH--------HHHHHHHhcCcchHHhhh
Confidence 46888899999999999999976 688999999998753322 222332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.|..+..++++||||.| ++.++++ ....+.+.++..++++++.||.|||.++.+|||||+.|||+..+| .+||+
T Consensus 78 gsyl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g--~vkl~ 153 (467)
T KOG0201|consen 78 GSYLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG--DVKLA 153 (467)
T ss_pred hheeecccHHHHHHHhcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC--cEEEE
Confidence 999999999999999995 9999998 566669999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
|||++......... .-..+|||+|||||++.
T Consensus 154 DfgVa~ql~~~~~r-----------r~tfvGTPfwMAPEVI~ 184 (467)
T KOG0201|consen 154 DFGVAGQLTNTVKR-----------RKTFVGTPFWMAPEVIK 184 (467)
T ss_pred ecceeeeeechhhc-----------cccccccccccchhhhc
Confidence 99999865532211 12346999999999864
|
|
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=313.36 Aligned_cols=149 Identities=22% Similarity=0.269 Sum_probs=124.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC---CCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l---~HpNIV~ 239 (1678)
+|++++.||+|+||+||+|+++ .++..+|+|.++............. +|+.+++.+ +||||++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~ni~~ 66 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDP------HSGHFVALKSVRVQTNEDGLPLSTV--------REVALLKRLEAFDHPNIVR 66 (288)
T ss_pred CceEeeEEeecCCeEEEEEEEC------CCCcEEEEEEeccCcCCCCCchHHH--------HHHHHHHHhhhcCCCCeee
Confidence 5899999999999999999965 5788999999875432221112222 666666555 7999999
Q ss_pred eeeEEEeC-----CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 240 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 240 l~~~~~~~-----~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+++++... ..+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~- 145 (288)
T cd07863 67 LMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG- 145 (288)
T ss_pred eeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-
Confidence 99998752 468999999999999999865555689999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 146 -~~kl~dfg~~~~ 157 (288)
T cd07863 146 -QVKLADFGLARI 157 (288)
T ss_pred -CEEECccCcccc
Confidence 899999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=322.81 Aligned_cols=148 Identities=22% Similarity=0.282 Sum_probs=127.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|++. .++..||+|.+............+. +|+.+++.++||||++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 84 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDT------VLGINVAVKKLSRPFQNQTHAKRAY--------RELVLLKCVNHKNIIS 84 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEc------CCCceeEEEEecccccchhHHHHHH--------HHHHHHHhCCCCCEee
Confidence 4689999999999999999999965 4688999999976433333333444 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++.... .+|+||||++++|.+.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~ 160 (359)
T cd07876 85 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160 (359)
T ss_pred eeeeeccCCCccccceeEEEEeCCCcCHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence 999987543 579999999999888875 2378899999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 161 --~~kl~Dfg~a~~ 172 (359)
T cd07876 161 --TLKILDFGLART 172 (359)
T ss_pred --CEEEecCCCccc
Confidence 899999999974
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-31 Score=296.25 Aligned_cols=289 Identities=19% Similarity=0.297 Sum_probs=248.6
Q ss_pred EEeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC
Q 000316 1312 PWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC 1391 (1678)
Q Consensus 1312 lWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~ 1391 (1678)
.|-......+.+.||..+|+.+-|+|+...+++++. |++|++||..+|++...++||++.|.+|+|+..|..+++|
T Consensus 93 ~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~----d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tc 168 (406)
T KOG0295|consen 93 LWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASE----DATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATC 168 (406)
T ss_pred hcCCCCCchhhhhccccceeeeeeccCceEEEEecC----CceEEEEEccchhhhhhhhccccceeEEEEecCccEEEec
Confidence 365555678889999999999999999999999997 9999999999999999999999999999999999888766
Q ss_pred --CCcEEEEECCC-CceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEE
Q 000316 1392 --DGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL 1468 (1678)
Q Consensus 1392 --DgtVrIWD~~t-g~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~L 1468 (1678)
|-.+++||..+ -++++.+.+|. ..+.++.+-|.|.++
T Consensus 169 SsDl~~~LWd~~~~~~c~ks~~gh~----------------------------------------h~vS~V~f~P~gd~i 208 (406)
T KOG0295|consen 169 SSDLSAKLWDFDTFFRCIKSLIGHE----------------------------------------HGVSSVFFLPLGDHI 208 (406)
T ss_pred CCccchhheeHHHHHHHHHHhcCcc----------------------------------------cceeeEEEEecCCee
Confidence 77799999875 34444444332 236677777789999
Q ss_pred EEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEE
Q 000316 1469 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1548 (1678)
Q Consensus 1469 asgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~ 1548 (1678)
++++.|.+|+.||+.+|-++.++.+| +.+|+.++.. .||.++|+|+.|.++++|-+.++++..
T Consensus 209 lS~srD~tik~We~~tg~cv~t~~~h------~ewvr~v~v~-----------~DGti~As~s~dqtl~vW~~~t~~~k~ 271 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTGYCVKTFPGH------SEWVRMVRVN-----------QDGTIIASCSNDQTLRVWVVATKQCKA 271 (406)
T ss_pred eecccccceeEEecccceeEEeccCc------hHhEEEEEec-----------CCeeEEEecCCCceEEEEEeccchhhh
Confidence 99999999999999999999999965 4478887764 467899999999999999999999999
Q ss_pred EEeccCCCeEEEE-cC---------------CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEE
Q 000316 1549 SWRAHDGYVTKLA-AP---------------EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDV 1610 (1678)
Q Consensus 1549 ~l~gH~~~V~sva-sp---------------dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~L 1610 (1678)
.++.|+.+|-+++ .| .+++++++|.|++|++||+.++ .++.++.||.++|. +|+|.|++|
T Consensus 272 ~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg--~cL~tL~ghdnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 272 ELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG--MCLFTLVGHDNWVRGVAFSPGGKYI 349 (406)
T ss_pred hhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC--eEEEEEecccceeeeeEEcCCCeEE
Confidence 9999999998887 33 1259999999999999999999 88999999999999 599999999
Q ss_pred EEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1611 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1611 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
+|+.+|+ +++||+. ++++ .+.+. .|...|++++|+-+..+++||+-|.++++|
T Consensus 350 ~ScaDDktlrvwdl~-----~~~c----mk~~~-----ah~hfvt~lDfh~~~p~VvTGsVdqt~Kvw 403 (406)
T KOG0295|consen 350 LSCADDKTLRVWDLK-----NLQC----MKTLE-----AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 403 (406)
T ss_pred EEEecCCcEEEEEec-----ccee----eeccC-----CCcceeEEEecCCCCceEEeccccceeeee
Confidence 9999999 9999986 2222 12221 478899999999999999999999999999
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=320.03 Aligned_cols=142 Identities=20% Similarity=0.193 Sum_probs=123.6
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||++++. .++..||+|.+....... .....+. +|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05595 1 KLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTALKYAFQT 66 (323)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCcceeeEEec
Confidence 47999999999999965 468899999997642222 2222333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+.+|+||||++| +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~ 142 (323)
T cd05595 67 HDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC--CEEecccHHh
Confidence 9999999999995 9998887 456789999999999999999999999999999999999999999 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 143 ~~ 144 (323)
T cd05595 143 KE 144 (323)
T ss_pred cc
Confidence 74
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=317.37 Aligned_cols=144 Identities=21% Similarity=0.221 Sum_probs=119.0
Q ss_pred eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
.++||+|+||+||+|+++ ...+++.+|+|.+...... .... +|+.+|+.++||||++++++|..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~----~~~~~~~~aiK~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRK----DGKDDRDYALKQIEGTGIS----MSAC--------REIALLRELKHPNVISLQKVFLS 69 (317)
T ss_pred ccccccCCCeEEEEEEEc----cCCCCceEEEEEECCCCCc----HHHH--------HHHHHHHhcCCCCCcceeeeEec
Confidence 468999999999999853 1245688999998653222 1222 89999999999999999999864
Q ss_pred --CCeEEEeccCCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec----CCC
Q 000316 247 --SGLITSVIPKTPYTLENILQFS-------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 313 (1678)
Q Consensus 247 --~~~~~lVmEy~~g~L~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~----~~g 313 (1678)
+..+|+||||++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~ 149 (317)
T cd07868 70 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence 4578999999999999988642 123589999999999999999999999999999999999994 445
Q ss_pred ceeEEEEecCCcccC
Q 000316 314 WSWLYICDKPLVGFN 328 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~ 328 (1678)
.+||+|||+|+..
T Consensus 150 --~~kl~DfG~a~~~ 162 (317)
T cd07868 150 --RVKIADMGFARLF 162 (317)
T ss_pred --cEEEeecCceecc
Confidence 8999999999743
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=317.30 Aligned_cols=145 Identities=18% Similarity=0.197 Sum_probs=123.1
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHH---hhccCCCCcccc
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESS---VPGCLRHPNVAP 239 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~---iL~~l~HpNIV~ 239 (1678)
|++++.||+|+||.||+|.++ .++..||||.+++....... ...+. +|++ +++.++||||++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~l~--------~e~~~~~~~~~l~hp~i~~ 66 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYK------KTGELYAIKALKKGDIIARDEVESLM--------CEKRIFETANSERHPFLVN 66 (324)
T ss_pred CeEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccccCCCChhc
Confidence 788999999999999999965 46789999999764322222 22222 5554 456778999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++.+.+.+|+||||++| +|...+. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~--~~k 141 (324)
T cd05589 67 LFACFQTEDHVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG--FVK 141 (324)
T ss_pred eeeEEEcCCEEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--cEE
Confidence 99999999999999999995 9988876 35689999999999999999999999999999999999999999 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 142 L~Dfg~~~~ 150 (324)
T cd05589 142 IADFGLCKE 150 (324)
T ss_pred eCcccCCcc
Confidence 999999874
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=318.60 Aligned_cols=142 Identities=19% Similarity=0.169 Sum_probs=122.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|+++ .++..||+|++.+..... .....+. +|+.+++.+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~h~~iv~~~~~~~ 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLK------ESGRLYAVKVLKKDVILQDDDVECTM--------TEKRILSLARNHPFLTQLYCCFQ 66 (320)
T ss_pred CeeeeCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhccHHHHHH--------HHHHHHHhccCCCchhceeeEEE
Confidence 47999999999999965 568899999987543222 1222233 788888776 6999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~iv~Ey~~~g~L~~~i~--~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--~~kL~DfG~ 142 (320)
T cd05590 67 TPDRLFFVMEFVNGGDLMFHIQ--KSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGM 142 (320)
T ss_pred cCCEEEEEEcCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeeCCC
Confidence 99999999999995 9999887 456789999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (320)
T cd05590 143 CKE 145 (320)
T ss_pred Cee
Confidence 874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=319.31 Aligned_cols=151 Identities=18% Similarity=0.162 Sum_probs=128.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccC-CCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l 240 (1678)
+|++++.||+|+||.||+|++.. ...++..||+|++.+..... ....+... +|+.+|+.+ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~~i~~~ 70 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVT---GHDTGKLYAMKVLQKAALVQKAKTVEHTR-------TERNVLEHVRQSPFLVTL 70 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcc---cCCCCCEEEEEEEEHHHHhhhhhHHHHHH-------HHHHHHHhccCCCCcccE
Confidence 58999999999999999998642 22468899999987532211 11112221 899999999 58999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+++||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~--~~kl 146 (332)
T cd05614 71 HYAFQTEAKLHLILDYVSGGEMFTHLY--QRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVVL 146 (332)
T ss_pred EEEEecCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC--CEEE
Confidence 9999999999999999995 9999997 456689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 147 ~DfG~~~~ 154 (332)
T cd05614 147 TDFGLSKE 154 (332)
T ss_pred eeCcCCcc
Confidence 99999874
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-31 Score=317.37 Aligned_cols=174 Identities=15% Similarity=0.092 Sum_probs=140.2
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||++++. .++..||+|++.+.........+.++ +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMK------NTGQVYAMKILNKWEMLKRAETACFR-------EERDVLVNGDRRWITNLH 67 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCCCceE
Confidence 47999999999999999999965 46789999998753222222222232 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++|.+++.+|+||||++| +|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 144 (331)
T cd05597 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--HIRLA 144 (331)
T ss_pred EEEecCCeEEEEEecCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC--CEEEE
Confidence 999999999999999985 99999973 245689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
|||+++........ ......||+.|||||++
T Consensus 145 Dfg~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~ 175 (331)
T cd05597 145 DFGSCLRLLADGTV----------QSNVAVGTPDYISPEIL 175 (331)
T ss_pred ECCceeecCCCCCc----------cccceeccccccCHHHH
Confidence 99998753311100 01112367777777764
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-32 Score=317.25 Aligned_cols=174 Identities=18% Similarity=0.218 Sum_probs=144.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~ 239 (1678)
...|+++++||+|+.+.||++.. .+..++|+|++.......+...-+. +|+.+|.+|+ |.+||+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~-------s~~~iyalkkv~~~~~D~qtl~gy~--------nEI~lL~KLkg~~~IIq 424 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLN-------SDKQIYALKKVVLLEADNQTLDGYR--------NEIALLNKLKGHDKIIQ 424 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeec-------CCCcchhhhHHHHhhcCHHHHHHHH--------HHHHHHHHhcCCceEEE
Confidence 44799999999999999999984 4678899999877656666556666 9999999995 899999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
||++-..++.+||||||-+.||..+|+. +....+.+.+++|.+|++.|+.++|.+||||-||||.|+|+-.. .+||
T Consensus 425 L~DYEv~d~~lYmvmE~Gd~DL~kiL~k-~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG---~LKL 500 (677)
T KOG0596|consen 425 LYDYEVTDGYLYMVMECGDIDLNKILKK-KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKG---RLKL 500 (677)
T ss_pred EeeeeccCceEEEEeecccccHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEee---eEEe
Confidence 9999999999999999999999999994 44456668999999999999999999999999999999999875 5999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+|||+|......... . ....-.||+-||+||.+.
T Consensus 501 IDFGIA~aI~~DTTs---I------~kdsQvGT~NYMsPEAl~ 534 (677)
T KOG0596|consen 501 IDFGIANAIQPDTTS---I------VKDSQVGTVNYMSPEALT 534 (677)
T ss_pred eeechhcccCccccc---e------eeccccCcccccCHHHHh
Confidence 999999975532111 1 111224899999999764
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-32 Score=344.05 Aligned_cols=175 Identities=16% Similarity=0.119 Sum_probs=149.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+|.+++++ .++.+||+|++++-.........+.+ .|..+|..-+.+.||+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k------~t~~VYAMK~lnK~eMlKr~~tA~F~-------EERDimv~~ns~Wiv~L 140 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHK------STEKVYAMKILNKWEMLKRAETACFR-------EERDIMVFGNSEWIVQL 140 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEee------ccccchhHHHhhHHHHhhchhHHHHH-------HHhHHHHcCCcHHHHHH
Confidence 568999999999999999999976 68899999999874444333334443 88999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+.+|+++.++|+|||||+| ||..++.. ...+++..++||+.+|+.||.-||+.|.|||||||+|||||..| +|||
T Consensus 141 hyAFQD~~~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--HikL 216 (1317)
T KOG0612|consen 141 HYAFQDERYLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--HIKL 216 (1317)
T ss_pred HHHhcCccceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--cEee
Confidence 9999999999999999995 99999983 44799999999999999999999999999999999999999999 9999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+|||.+-.....+.. .+...+|||-|.+||++.
T Consensus 217 ADFGsClkm~~dG~V----------~s~~aVGTPDYISPEvLq 249 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTV----------RSSVAVGTPDYISPEVLQ 249 (1317)
T ss_pred ccchhHHhcCCCCcE----------EeccccCCCCccCHHHHH
Confidence 999987654422211 123346899999999875
|
|
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-31 Score=316.49 Aligned_cols=147 Identities=17% Similarity=0.121 Sum_probs=126.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCC-Ccccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRH-PNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~H-pNIV~l 240 (1678)
+|++++.||+|+||.||+|+++ .++..||+|++.+..... .....+. +|+.++..+.| ++|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVIIQDDDVECTM--------VEKRVLALPGKPPFLTQL 66 (324)
T ss_pred CceEEEEEeeccCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhcCCCCceeee
Confidence 5899999999999999999964 467889999997643222 2223333 89999999976 468899
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kL 142 (324)
T cd05587 67 HSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG--HIKI 142 (324)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC--CEEE
Confidence 9999999999999999984 9999997 455689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 143 ~Dfg~~~~ 150 (324)
T cd05587 143 ADFGMCKE 150 (324)
T ss_pred eecCccee
Confidence 99999874
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-31 Score=320.52 Aligned_cols=148 Identities=22% Similarity=0.275 Sum_probs=127.5
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||.||+|.+. ..+..+|+|.+............+. +|+.+++.++||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 80 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIS 80 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEec------CCCceEEEEEeCCcccChHHHHHHH--------HHHHHHHHhCCCchhc
Confidence 4679999999999999999999864 4678899999876433333333444 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++.... ..|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~ 156 (355)
T cd07874 81 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_pred eeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence 999987543 5799999999998888762 378889999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 157 --~~kl~Dfg~~~~ 168 (355)
T cd07874 157 --TLKILDFGLART 168 (355)
T ss_pred --CEEEeeCccccc
Confidence 899999999974
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-31 Score=321.63 Aligned_cols=149 Identities=22% Similarity=0.267 Sum_probs=127.8
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. ..+..||||++............+. +|+.+++.++||||++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~ii~ 87 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDA------ILERNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIG 87 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEEC------CCCcEEEEEEeCccccCchhHHHHH--------HHHHHHHhcCCCCccc
Confidence 4678999999999999999999965 4678899999876433333333343 8999999999999999
Q ss_pred eeeEEEeC------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++... ..+|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 163 (364)
T cd07875 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163 (364)
T ss_pred cceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC
Confidence 99988654 35799999999999988862 378889999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccC
Q 000316 314 WSWLYICDKPLVGFN 328 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~ 328 (1678)
.+||+|||+++..
T Consensus 164 --~~kL~DfG~a~~~ 176 (364)
T cd07875 164 --TLKILDFGLARTA 176 (364)
T ss_pred --cEEEEeCCCcccc
Confidence 8999999999743
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.5e-31 Score=321.55 Aligned_cols=149 Identities=26% Similarity=0.299 Sum_probs=127.8
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||.||+|.+. .++..||+|.+............+. +|+.+|+.++||||++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 78 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDT------RLRQKVAVKKLSRPFQSLIHARRTY--------RELRLLKHMKHENVIG 78 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEEC------CCCCEEEEEEeCchhhhhHHHHHHH--------HHHHHHHhcCCCchhh
Confidence 4678999999999999999999964 4678999999875432222223333 8999999999999999
Q ss_pred eeeEEEeC------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
++++|... ...|++||++.++|.++++ ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~ 155 (343)
T cd07878 79 LLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 155 (343)
T ss_pred hhhhhcccccccccCcEEEEeecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCC
Confidence 99998643 3579999999889998886 34689999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 156 --~~kl~Dfg~~~~ 167 (343)
T cd07878 156 --ELRILDFGLARQ 167 (343)
T ss_pred --CEEEcCCcccee
Confidence 899999999874
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=319.45 Aligned_cols=142 Identities=20% Similarity=0.192 Sum_probs=123.3
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|++. .++..||+|++.+...... ....+. +|+++++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~--------~e~~~l~~~~hp~i~~~~~~~~~ 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEK------ATGRYYAMKILKKEVIVAKDEVAHTL--------TENRVLQNSRHPFLTALKYSFQT 66 (325)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCCceEEEEEc
Confidence 46999999999999965 4788999999976432222 222333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.+.+|+||||++| +|..++. ....+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--~~kL~Dfg~ 142 (325)
T cd05594 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGL 142 (325)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--CEEEecCCC
Confidence 9999999999995 9998887 45678999999999999999999997 8999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (325)
T cd05594 143 CKE 145 (325)
T ss_pred Cee
Confidence 874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=292.01 Aligned_cols=328 Identities=18% Similarity=0.274 Sum_probs=251.4
Q ss_pred ccCcccccccccccchhhhhhhccccccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCCCceeEEeccccccEEE
Q 000316 1253 SKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRS 1332 (1678)
Q Consensus 1253 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~~~~l~tl~gH~~~V~s 1332 (1678)
..+.|..+.+.++++........-....-|.|||.+.-..+.| |.||++||++++||..|++..++.||+++|.+
T Consensus 75 ~~kgiSsE~~leIEYv~~~~aP~pl~~~~hdDWVSsv~~~~~~-----IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~ 149 (423)
T KOG0313|consen 75 EEKGISSEEILEIEYVEAITAPKPLQCFLHDDWVSSVKGASKW-----ILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKS 149 (423)
T ss_pred HHcCcChhheeEEEEEEecCCCCccccccchhhhhhhcccCce-----EEEeecCCeeEEEecCCceEEEEecCCcceee
Confidence 4455677888888888776666667777799999987666776 99999999999999999999999999999999
Q ss_pred EEEecCC---CEEEEEecCCCCCCeEEEEeCCCCeE----EEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCC
Q 000316 1333 VAVGQDE---CTVFTAGIGPGFKGTVQKWELTRINC----VSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG 1403 (1678)
Q Consensus 1333 vafspdg---~~LaSgS~d~~~DgtVrlWDl~tg~~----l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg 1403 (1678)
++|.-.. ..+++||. |.++++|..+.++. +..-+||...|-+|+..+++.++ +|.|.+|+||+..+
T Consensus 150 v~~v~~n~~~~~fvsas~----Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~- 224 (423)
T KOG0313|consen 150 VAWVIKNSSSCLFVSASM----DQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVET- 224 (423)
T ss_pred eEEEecCCccceEEEecC----CceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCC-
Confidence 9886544 35999998 99999999887743 33345999999999999999998 55599999999332
Q ss_pred ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECC
Q 000316 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1678)
Q Consensus 1404 ~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~ 1483 (1678)
.....+...+..... ....-........+....+|...|.++.|.+ ...+.+++.|.+|+.||+.
T Consensus 225 ~~~~~~E~~s~~rrk----~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-----------~~v~yS~SwDHTIk~WDle 289 (423)
T KOG0313|consen 225 DEEDELESSSNRRRK----KQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-----------ATVIYSVSWDHTIKVWDLE 289 (423)
T ss_pred Cccccccccchhhhh----hhhhhhcccccCceEEecccccceeeEEEcC-----------CCceEeecccceEEEEEee
Confidence 222222221110000 0000011112223344456666666666653 5688999999999999999
Q ss_pred CCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc---EEEEEeccCCCeEEE
Q 000316 1484 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN---VIASWRAHDGYVTKL 1560 (1678)
Q Consensus 1484 tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~---~i~~l~gH~~~V~sv 1560 (1678)
+|..+.++.+. ....|+... +...+||+|+.|..+++||.|++. ...++.||+++|.+|
T Consensus 290 tg~~~~~~~~~-------ksl~~i~~~-----------~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssv 351 (423)
T KOG0313|consen 290 TGGLKSTLTTN-------KSLNCISYS-----------PLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSV 351 (423)
T ss_pred cccceeeeecC-------cceeEeecc-----------cccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhhe
Confidence 99988777643 235666654 334699999999999999999863 457889999999999
Q ss_pred E-cCCC-CEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecC-CEEEEEeCCC-eEEEecC
Q 000316 1561 A-APED-HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG-QDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1561 a-spdg-~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg-~~LaSgs~D~-I~vwdl~ 1624 (1678)
. +|.. ..|+|||.|+++++||+++.+ .+++.+.+|.+.|.++.++. ..++|||.|+ |+++.-.
T Consensus 352 kwsp~~~~~~~S~S~D~t~klWDvRS~k-~plydI~~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 352 KWSPTNEFQLVSGSYDNTVKLWDVRSTK-APLYDIAGHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred ecCCCCceEEEEEecCCeEEEEEeccCC-CcceeeccCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 9 6654 589999999999999999974 47899999999999988875 4899999999 9998743
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-32 Score=295.52 Aligned_cols=210 Identities=20% Similarity=0.221 Sum_probs=185.3
Q ss_pred cccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCC
Q 000316 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 235 (1678)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~Hp 235 (1678)
......++|++.+.||+|-||.||+|+.+ +++-+||+|++.+...........++ ||++|-..|+||
T Consensus 16 ~~~~~l~dfeigr~LgkgkFG~vYlarek------ks~~IvalKVlfKsqi~~~~v~~qlr-------REiEIqs~L~hp 82 (281)
T KOG0580|consen 16 TKTWTLDDFEIGRPLGKGKFGNVYLAREK------KSLFIVALKVLFKSQILKTQVEHQLR-------REIEIQSHLRHP 82 (281)
T ss_pred ccccchhhccccccccCCccccEeEeeec------cCCcEEEEeeeeHHHHHHhcchhhhh-------heeEeecccCCc
Confidence 34455789999999999999999999965 67899999999887766666666665 999999999999
Q ss_pred cccceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
||+++|++|.++..+|+++||.+ |+|...++..+...+++..+..|++|++.||.|||.++||||||||+|+|++.++
T Consensus 83 nilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~- 161 (281)
T KOG0580|consen 83 NILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG- 161 (281)
T ss_pred cHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC-
Confidence 99999999999999999999999 7999999977788899999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
.+||+|||-+.... ....++-| ||..|.+||+..+..++..+|.|..|.+. ||+|+...+|...+
T Consensus 162 -~lkiAdfGwsV~~p-------~~kR~tlc------gt~dyl~pEmv~~~~hd~~Vd~w~lgvl~-yeflvg~ppFes~~ 226 (281)
T KOG0580|consen 162 -ELKIADFGWSVHAP-------SNKRKTLC------GTLDYLPPEMVEGRGHDKFVDLWSLGVLC-YEFLVGLPPFESQS 226 (281)
T ss_pred -CeeccCCCceeecC-------CCCceeee------cccccCCHhhcCCCCccchhhHHHHHHHH-HHHHhcCCchhhhh
Confidence 89999999987543 12223334 79999999999999999999999999665 99999887777654
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=282.77 Aligned_cols=280 Identities=18% Similarity=0.300 Sum_probs=237.4
Q ss_pred hhhccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCCce--eEEeccccccEEEEEEecCCCEEEEEec
Q 000316 1272 RQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASI--LSSIRAHHGALRSVAVGQDECTVFTAGI 1347 (1678)
Q Consensus 1272 ~~~~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~~~--l~tl~gH~~~V~svafspdg~~LaSgS~ 1347 (1678)
...+...+.||++.|+. |+|+|.. ||||+.|..|.+|+..|.+ ..+++||+++|..+.|..|+..|+|+|.
T Consensus 36 l~ap~m~l~gh~geI~~~~F~P~gs~-----~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gt 110 (338)
T KOG0265|consen 36 LQAPIMLLPGHKGEIYTIKFHPDGSC-----FASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGT 110 (338)
T ss_pred ccchhhhcCCCcceEEEEEECCCCCe-----EeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecC
Confidence 34567789999999995 9999998 9999999999999988654 5678899999999999999999999998
Q ss_pred CCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE---EeCCCcEEEEECCCCceeEEecccCccccccCCCCC
Q 000316 1348 GPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1678)
Q Consensus 1348 d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l---aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~ 1424 (1678)
|++|+.||+++|++++.+++|.+-|++++-..-+..+ +|.|||+|+||.++..+++++...
T Consensus 111 ----Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k------------ 174 (338)
T KOG0265|consen 111 ----DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK------------ 174 (338)
T ss_pred ----CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccc------------
Confidence 9999999999999999999999999999844334444 455999999999998888777532
Q ss_pred CccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcc
Q 000316 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V 1504 (1678)
. .++++.|...+..+.+|+-|+.|++||++.+..++++.||. ..|
T Consensus 175 -------------------y----------qltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~------DtI 219 (338)
T KOG0265|consen 175 -------------------Y----------QLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHA------DTI 219 (338)
T ss_pred -------------------e----------eEEEEEecccccceeeccccCceeeeccccCcceEEeeccc------Cce
Confidence 1 24555555668999999999999999999999999999765 456
Q ss_pred eEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC----CcEEEEEeccCC--CeEEE--E-cCCCCEEEEEeCCC
Q 000316 1505 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS----GNVIASWRAHDG--YVTKL--A-APEDHLLVSSSLDK 1575 (1678)
Q Consensus 1505 ~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t----g~~i~~l~gH~~--~V~sv--a-spdg~~LaSgS~Dg 1575 (1678)
+.+..+ ++|.++.+-+.|.++++||++- ..++..+.+|.. ..+.+ + +|+++.+.+||.|+
T Consensus 220 t~lsls-----------~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr 288 (338)
T KOG0265|consen 220 TGLSLS-----------RYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADR 288 (338)
T ss_pred eeEEec-----------cCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccc
Confidence 777654 5667999999999999999985 346888887643 33433 3 89999999999999
Q ss_pred cEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEE
Q 000316 1576 TLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGL 1620 (1678)
Q Consensus 1576 tI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~v 1620 (1678)
.+++||.... ..++.+.||.+.|++ |+|....+.+++.|+ |.+
T Consensus 289 ~vyvwd~~~r--~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 289 FVYVWDTTSR--RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred eEEEeecccc--cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 9999999776 678899999999994 999999999999998 775
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-31 Score=316.23 Aligned_cols=146 Identities=16% Similarity=0.207 Sum_probs=124.3
Q ss_pred eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEE
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1678)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~ 244 (1678)
++.||+|+||.||+|++.. ....+..||+|.+.+..... .....+. +|+.+|+.++||||++++++|
T Consensus 1 ~~~lg~G~~g~V~~~~~~~---~~~~~~~~avK~~~~~~~~~~~~~~~~~~--------~E~~il~~l~hp~iv~~~~~~ 69 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVT---GADTGKIFAMKVLKKATIVRNQKDTAHTK--------AERNILEAVKHPFIVDLIYAF 69 (323)
T ss_pred CceeeecCCeEEEEEEEcc---cCCCCCEEEEEEEEHHHHHhhhhhHHHHH--------HHHHHHHhCCCCchhceeeEE
Confidence 3689999999999998532 12468899999987542211 1112222 899999999999999999999
Q ss_pred EeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 245 ~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
..++.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 70 ~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg 145 (323)
T cd05584 70 QTGGKLYLILEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVKLTDFG 145 (323)
T ss_pred ecCCeEEEEEeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEeeCc
Confidence 999999999999995 9999997 456788999999999999999999999999999999999999999 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
+++.
T Consensus 146 ~~~~ 149 (323)
T cd05584 146 LCKE 149 (323)
T ss_pred CCee
Confidence 9874
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=313.99 Aligned_cols=147 Identities=17% Similarity=0.130 Sum_probs=126.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccC-CCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l 240 (1678)
+|++++.||+|+||.||+|++. .++..+|+|.+.+....... ..... .|..++..+ +||+|+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALSGKPPFLTQL 66 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCeEeeE
Confidence 5899999999999999999964 46789999999764322222 22222 788888777 57999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+.+|+||||++ |+|.+.+. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kL 142 (323)
T cd05616 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQ--QVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred EEEEecCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC--cEEE
Confidence 999999999999999998 59999987 455689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 143 ~DfG~~~~ 150 (323)
T cd05616 143 ADFGMCKE 150 (323)
T ss_pred ccCCCcee
Confidence 99999874
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-29 Score=330.40 Aligned_cols=188 Identities=13% Similarity=0.086 Sum_probs=150.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+++++||+|+||.||+|++. .++..||||++.............+. +|+.+++.++||||+++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiKvi~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~Iv~~ 69 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKK------NNSKLYAVKVVKKADMINKNMVHQVQ-------AERDALALSKSPFIVHL 69 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCcEEEEEEEehhhccCHHHHHHHH-------HHHHHHHhcCCCCcCeE
Confidence 578999999999999999999964 46889999999764433333333332 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+.+||||||++| +|.+++. ..+.+++..++.++.||+.||.|||++|||||||||+||||+.++ .+||
T Consensus 70 ~~~~~~~~~~~lVmEy~~g~~L~~li~--~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--~vkL 145 (669)
T cd05610 70 YYSLQSANNVYLVMEYLIGGDVKSLLH--IYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKL 145 (669)
T ss_pred EEEEEECCEEEEEEeCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC--CEEE
Confidence 9999999999999999985 9999997 345688999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccc-ccccccccccC
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-WHSQFNRWWRG 376 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-y~~~~d~W~~G 376 (1678)
+|||+++........ .....+|+.|++||...... -....+.|..|
T Consensus 146 ~DFGls~~~~~~~~~-----------~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g 192 (669)
T cd05610 146 TDFGLSKVTLNRELN-----------MMDILTTPSMAKPKNDYSRTPGQVLSLISSLG 192 (669)
T ss_pred EeCCCCccccCCccc-----------ccccccCccccCccccccCCCCceeeeeeecC
Confidence 999999964421110 11234788999999543222 22244555555
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=316.18 Aligned_cols=143 Identities=20% Similarity=0.212 Sum_probs=124.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|+++ .++..||+|++++.........+.+. +|+.+++.+ +||||++++++|.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~il~~~~~hp~Iv~~~~~~~~ 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELK------KTRRIYAMKVIKKELVNDDEDIDWVQ-------TEKHVFETASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhccCCCCCCceEEEEEc
Confidence 47999999999999965 46789999999864333332223332 899999888 79999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+.+|+||||++| +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~g~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~ 143 (329)
T cd05588 68 ESRLFFVIEFVSGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEECcCccc
Confidence 9999999999995 9998887 456789999999999999999999999999999999999999999 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 144 ~~ 145 (329)
T cd05588 144 KE 145 (329)
T ss_pred cc
Confidence 74
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=281.47 Aligned_cols=324 Identities=16% Similarity=0.203 Sum_probs=266.2
Q ss_pred hhccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCC
Q 000316 1273 QEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1678)
Q Consensus 1273 ~~~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~ 1349 (1678)
....+++.+|++.|++ .+|+..| +|||+.|....||++. |..+..+.||+++|.++.||.||.+||||+.
T Consensus 54 DdS~~tF~~H~~svFavsl~P~~~l-----~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdm-- 126 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLHPNNNL-----VATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDM-- 126 (399)
T ss_pred ccceeehhhcCCceEEEEeCCCCce-----EEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCC--
Confidence 4557889999999997 6776776 9999999999999998 7899999999999999999999999999998
Q ss_pred CCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1350 ~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
+|.|+||+..++.....+-+--+.+.-++|+|....+ ++.||.|..|.+.++...+.+.+|...
T Consensus 127 --sG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~------------ 192 (399)
T KOG0296|consen 127 --SGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSP------------ 192 (399)
T ss_pred --CccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCC------------
Confidence 8999999999999888887667778889999988777 455999999999987777778765322
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sv 1507 (1678)
++|=.+.|+|+.+++|..||+|++||+.+|++++........ .-.++
T Consensus 193 ----------------------------ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~-----~~~~~ 239 (399)
T KOG0296|consen 193 ----------------------------CTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGL-----ELPCI 239 (399)
T ss_pred ----------------------------cccccccCCCceEEEEecCceEEEEecCCCceeEEecccccC-----cCCcc
Confidence 455567788999999999999999999999999988754421 11222
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe--------ccCCCeEEEE----cCCCCEEEEEeCCC
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--------AHDGYVTKLA----APEDHLLVSSSLDK 1575 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~--------gH~~~V~sva----spdg~~LaSgS~Dg 1575 (1678)
+...++..+.+|+.++.+++-...+|+.+.... .+...+.+|. +..=.+.|+|+.||
T Consensus 240 -----------~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG 308 (399)
T KOG0296|consen 240 -----------SLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDG 308 (399)
T ss_pred -----------ccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccc
Confidence 223556789999999999999999999988877 4566666666 33346889999999
Q ss_pred cEEEEEcCCCCCCCCeEeecCCCCEEEEEecC-CEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcE
Q 000316 1576 TLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG-QDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVL 1653 (1678)
Q Consensus 1576 tI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg-~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I 1653 (1678)
+|.|||+..... ...-.|..+|..+-+.+ .+|++++.|+ |+.||.. .|+. .-... +|...|
T Consensus 309 ~i~iyD~a~~~~---R~~c~he~~V~~l~w~~t~~l~t~c~~g~v~~wDaR-----tG~l-------~~~y~--GH~~~I 371 (399)
T KOG0296|consen 309 TIAIYDLAASTL---RHICEHEDGVTKLKWLNTDYLLTACANGKVRQWDAR-----TGQL-------KFTYT--GHQMGI 371 (399)
T ss_pred eEEEEecccchh---heeccCCCceEEEEEcCcchheeeccCceEEeeecc-----ccce-------EEEEe--cCchhe
Confidence 999999988632 34556888899755555 8899999999 9999953 3443 22222 599999
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1654 SSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1654 ~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+++++|++++++|+|+|++.+||+
T Consensus 372 l~f~ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 372 LDFALSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred eEEEEcCCCcEEEEecCCCeEEEEe
Confidence 9999999999999999999999985
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=313.01 Aligned_cols=142 Identities=15% Similarity=0.116 Sum_probs=121.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|+++ .++..||+|.+++..... ....... .|..++..+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~~~~~~ 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELK------GKGEYFAVKALKKDVVLIDDDVECTM--------VEKRVLALAWENPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCCccCeeEEEE
Confidence 47999999999999965 467899999997642211 1122222 788888754 8999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+++.+|+||||++| +|..++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05620 67 TKEHLFFVMEFLNGGDLMFHIQ--DKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEECCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEeCccCC
Confidence 99999999999995 9999987 456689999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (316)
T cd05620 143 CKE 145 (316)
T ss_pred Cee
Confidence 873
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=314.45 Aligned_cols=142 Identities=15% Similarity=0.133 Sum_probs=121.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|++. .++..||+|.+.+...... ....+. .|.++++.+ +||||++++++|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~hp~i~~~~~~~~ 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELK------GTDEVYAIKVLKKDVILQDDDVDCTM--------TEKRILALAAKHPFLTALHCCFQ 66 (321)
T ss_pred CccccCCCeEEEEEEEC------CCCCEEEEEEEeHHHhhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 46999999999999964 4678999999876432222 222233 788888866 7999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+++.+|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--~~kL~Dfg~ 142 (321)
T cd05591 67 TKDRLFFVMEYVNGGDLMFQIQ--RSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--HCKLADFGM 142 (321)
T ss_pred cCCeEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeeccc
Confidence 99999999999995 9999987 456689999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (321)
T cd05591 143 CKE 145 (321)
T ss_pred cee
Confidence 874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=329.43 Aligned_cols=183 Identities=16% Similarity=0.207 Sum_probs=135.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC------C
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR------H 234 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~------H 234 (1678)
.++|+++++||+|+||.||+|.+. ..+..||||+++..... ..+.. +|+.+++.++ |
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~------~~~~~vAvK~i~~~~~~---~~~~~--------~e~~~l~~l~~~~~~~~ 190 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDR------KRKEYCAVKIVRNVPKY---TRDAK--------IEIQFMEKVRQADPADR 190 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEc------CCCeEEEEEEEecchhh---HHHHH--------HHHHHHHHHhhcCcccC
Confidence 468999999999999999999964 46788999998642111 11122 5666665554 4
Q ss_pred CcccceeeEEEeC-CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCC
Q 000316 235 PNVAPVLGLLKTS-GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 235 pNIV~l~~~~~~~-~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~ 312 (1678)
++|++++++|..+ ..+|+|||++.++|.+++. +.+.+++..++.++.||+.||+|||+ .|||||||||+|||++.+
T Consensus 191 ~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~--~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 191 FPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIM--KHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred cceeeeEEEEEcCCceEEEEEeccCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 5689999999865 4789999999889999987 35678999999999999999999998 599999999999999876
Q ss_pred Cc--------------eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccC
Q 000316 313 CW--------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 313 g~--------------~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
+. ..+||+|||.+...... .....||+.|||||++.+..|+.++|+|+.|
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~--------------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 332 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERHS--------------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMG 332 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCccc--------------cccccCCccccCcHHhhcCCCCcHHHHHHHH
Confidence 51 14899999987632210 0112367788888876443333333333333
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=311.57 Aligned_cols=148 Identities=18% Similarity=0.226 Sum_probs=129.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||++++. .++..+|+|.+.... ......++. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCCCCeE
Confidence 468999999999999999999965 467889999987532 222223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++++..++.+++||||++| +|.+++. ....+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--~~k 144 (331)
T cd06649 69 YGAFYSDGEISICMEHMDGGSLDQVLK--EAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIK 144 (331)
T ss_pred EEEEEECCEEEEEeecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--cEE
Confidence 9999999999999999995 9999998 345689999999999999999999986 699999999999999999 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 145 l~Dfg~~~~ 153 (331)
T cd06649 145 LCDFGVSGQ 153 (331)
T ss_pred EccCccccc
Confidence 999999874
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=307.96 Aligned_cols=150 Identities=20% Similarity=0.245 Sum_probs=130.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|+++++||+|+||.||+|+++ .++..||+|.+....... ....+. +|+.+++.++||||++
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~nI~~ 68 (301)
T cd07873 4 KLETYIKLDKLGEGTYATVYKGRSK------LTDNLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVT 68 (301)
T ss_pred cccceEEeeEeccCcCEEEEEEEEc------CCCcEEEEEEEecccccC-chhHHH--------HHHHHHHhcCCCCcce
Confidence 3678999999999999999999865 467889999987543222 112223 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++..++..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 69 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~--~~kl 145 (301)
T cd07873 69 LHDIIHTEKSLTLVFEYLDKDLKQYLDD-CGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKL 145 (301)
T ss_pred EEEEEecCCeEEEEEeccccCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC--cEEE
Confidence 9999999999999999999999999874 344688999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 146 ~dfg~~~~ 153 (301)
T cd07873 146 ADFGLARA 153 (301)
T ss_pred CcCcchhc
Confidence 99999863
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=316.78 Aligned_cols=145 Identities=22% Similarity=0.268 Sum_probs=124.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+.+++||+|+||.||+|++. .+++.||||++.... .......+. +|+++|+.++|+||+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 137 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHR------PTGRLYALKVIYGNH-EDTVRRQIC--------REIEILRDVNHPNVVKC 137 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEEC------CCCCEEEEEEEecCC-cHHHHHHHH--------HHHHHHHhCCCCCccee
Confidence 567999999999999999999964 467899999986532 222223333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+|+||||+++ +|.+. ....+..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 138 ~~~~~~~~~~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL 209 (353)
T PLN00034 138 HDMFDHNGEIQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK--NVKI 209 (353)
T ss_pred eeEeccCCeEEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999995 77542 2356788889999999999999999999999999999999999 8999
Q ss_pred EecCCcccC
Q 000316 320 CDKPLVGFN 328 (1678)
Q Consensus 320 ~DFGlA~~~ 328 (1678)
+|||+++..
T Consensus 210 ~DfG~~~~~ 218 (353)
T PLN00034 210 ADFGVSRIL 218 (353)
T ss_pred cccccceec
Confidence 999999753
|
|
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=313.98 Aligned_cols=151 Identities=15% Similarity=0.100 Sum_probs=129.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|+++++||+|+||.||+++++ .++..+|+|.+.+.........+.++ +|+.++..++|+||++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLK------NADKVFAMKILNKWEMLKRAETACFR-------EERDVLVNGDNQWITTLH 67 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHHhhHHHHHH-------HHHHHHhhCCCCCEeeEE
Confidence 47999999999999999999965 46788999998653222222223232 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+.+.+|+||||++ |+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--~~kL~ 144 (332)
T cd05623 68 YAFQDENNLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLA 144 (332)
T ss_pred EEEecCCEEEEEEeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 599999983 245689999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccC
Q 000316 321 DKPLVGFN 328 (1678)
Q Consensus 321 DFGlA~~~ 328 (1678)
|||+++..
T Consensus 145 DfG~a~~~ 152 (332)
T cd05623 145 DFGSCLKL 152 (332)
T ss_pred ecchheec
Confidence 99998743
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >KOG1786 consensus Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-33 Score=368.59 Aligned_cols=241 Identities=40% Similarity=0.626 Sum_probs=200.1
Q ss_pred ccccccccccCccchhhhHhhhccccCCCCCCCcCCcccceEecCC-CC-CCCCCCCcCccCCcchhhhcc-cccchhcc
Q 000316 366 WHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFS-TK-PDENFDSGSRDLSKSKWRLAK-GDEQLDFT 442 (1678)
Q Consensus 366 y~~~~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~d~~-~~-~~~~~~~~~rdLskp~~~l~~-~~~~~~~~ 442 (1678)
....+..|..|+++||+|+|.+|.++||+++|+.|||||||+++++ .. .+..+|..+|++.|+++.... +.++....
T Consensus 335 ~~s~~~~W~~~~~~n~~yl~~ln~l~~r~~~~~~~~pi~pw~~~~~~~~~l~~~d~~~~r~~~~~~~~~s~e~~~~~~~r 414 (1081)
T KOG1786|consen 335 LKSAFGRWLSGELENFQYLMHLNTLAGRSIADLAQYPIFPWVLAFYDFSGLDLLDPLTARKLLKLGGHQSDEGYERFAKR 414 (1081)
T ss_pred hhhhhcccccCchhhhhhhhhcCcccccchhhhccCcccceeeccccccchhhcChHhhhhhhhccCCCCHHHHHHHhhh
Confidence 5678899999999999999999999999999999999999999554 33 488899999999999843221 11222233
Q ss_pred cCC------CCCCcccCccccCcceeeeeecccCchhHHHHHhhcccCCCCccchHHHhhcCCCc----------ccccc
Q 000316 443 YSS------SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPD----------ECIPE 506 (1678)
Q Consensus 443 ~~~------~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------EliPe 506 (1678)
|+. ....+||.++++|+++++.|++|..|++.++..++.+|.+..++..++++..|++. |+|||
T Consensus 415 ~~~~~d~~~~~~~~~~~t~~~S~~~~~~y~~r~~p~~~~~~~i~~~~~~~~d~~~~s~~~~Wt~~~~~~~~~~i~eli~~ 494 (1081)
T KOG1786|consen 415 FEEWLDQNAEDPLFHVLTHLLSPLIVMSYFARKNPLSELFLSIRRGYFPIADRLFHSRMQAWTPDEKGNLHSCIKELIPK 494 (1081)
T ss_pred hhhhhccccccccccccccccchhhhhhhhhhcCcchHHHHHhhcccccccchhhhhhhcccCcccccccchhHHHHHHH
Confidence 322 22348999999999999999999999999999999999988888788888888765 47888
Q ss_pred cccCCccccc-------CCCC---CCCeecCCCCC-CHHHHHHHHHHhhcchHHHccCCCccccc-cccCCCchhhHhcC
Q 000316 507 FYCDPQIFYS-------QHPG---MTDLAVPPWAG-SPEEFIKLHRDALESDRVSSRIHHWIDIT-FGYKMSGQAAIDAK 574 (1678)
Q Consensus 507 ff~~p~~~~~-------~~~~---~~dv~lP~Wa~-~~~~Fi~~~r~aLEs~~Vs~~l~~WIDli-fG~kq~g~~a~~~~ 574 (1678)
||++|+||.| .+.. ++||.|||||. +|++||++||+|||++|||++||+|||++ |||||.|++|+++.
T Consensus 495 ~~~~p~~l~n~~~~~lg~~~~~~~~~~~~lP~ws~~~~~~fi~~h~~ale~~~vs~~Lh~wId~~~fgykq~g~~~~~~~ 574 (1081)
T KOG1786|consen 495 FVNDPSFLENSVILDLGEKQNGDSVDDVILPPWSSSSPREFIRDHRKALESNRVSQRLHHWIDLTIFGYKQNGSAAVIAM 574 (1081)
T ss_pred hccChHHHhhhhhhhhhhhcccccccceecCcccccCHHHHHHHHhhcccccchhhccccceeeehhhhhhcchHHHHHH
Confidence 8899999998 3333 89999999998 79999999999999999999999999999 99999999999999
Q ss_pred CCCC----CCCCC-----------Cc-------ccccC--cCcccCCCCCCCCCCc
Q 000316 575 NVML----PSSEP-----------TK-------PKSVG--RLQLFTQPHPVRQTAT 606 (1678)
Q Consensus 575 Nv~~----~~~~~-----------~~-------~~~~g--~~qlf~~pHp~r~~~~ 606 (1678)
|||+ +..+. .+ ...+| |+|+|.++||.+....
T Consensus 575 nv~~~~~~~l~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~~~h~~~~~~~ 630 (1081)
T KOG1786|consen 575 NVFLVSNKHLFYVNSVLNLRGYDPLEQNILIVSNNHFKQTIKQLFPKKHSVSELTE 630 (1081)
T ss_pred HHHhhhhhhhccccchhhhcccchhhhhhhHHHhhccccchhhcccccccccccch
Confidence 9999 65421 11 11234 7999999999996554
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=311.75 Aligned_cols=142 Identities=18% Similarity=0.165 Sum_probs=120.4
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhcc-CCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~-l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|++. .++..||+|.++....... ...... .|..++.. .+||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~i~~~~~~~~ 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELK------GTNEFFAIKALKKDVVLEDDDVECTM--------VERRVLALAWEHPFLTHLFCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999999964 4678899999976432221 222222 67777765 48999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~gg~L~~~~~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~ 142 (316)
T cd05592 67 TKEHLFFVMEYLNGGDLMFHIQ--SSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--HIKIADFGM 142 (316)
T ss_pred cCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--CEEEccCcC
Confidence 99999999999985 9999987 345689999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 a~~ 145 (316)
T cd05592 143 CKE 145 (316)
T ss_pred CeE
Confidence 974
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-30 Score=305.51 Aligned_cols=359 Identities=17% Similarity=0.237 Sum_probs=266.9
Q ss_pred ccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC--CceeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1275 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1275 ~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~--~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
-...+.||.+-|++ |.|+-.. ..|++|+.|+++++||+. ..++.++++|.+.|++++|++|+..++++|.
T Consensus 139 ~th~fkG~gGvVssl~F~~~~~~---~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~R--- 212 (775)
T KOG0319|consen 139 CTHSFKGHGGVVSSLLFHPHWNR---WLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGR--- 212 (775)
T ss_pred EEEEecCCCceEEEEEeCCccch---hheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEecc---
Confidence 45678999999997 7666543 459999999999999998 3478999999999999999999999999997
Q ss_pred CCCeEEEEeCC----------------------------------------------CCe--------------------
Q 000316 1351 FKGTVQKWELT----------------------------------------------RIN-------------------- 1364 (1678)
Q Consensus 1351 ~DgtVrlWDl~----------------------------------------------tg~-------------------- 1364 (1678)
|+.+.|||+. +++
T Consensus 213 -Dkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~ 291 (775)
T KOG0319|consen 213 -DKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIE 291 (775)
T ss_pred -CcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceecc
Confidence 7788888751 110
Q ss_pred -----------------------EEEEEecCCccEEEEeecC-CCCcE--EeCCCcEEEEECCCCceeEEecccCccccc
Q 000316 1365 -----------------------CVSGYYGHEEVVNDICVLS-SSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLH 1418 (1678)
Q Consensus 1365 -----------------------~l~~l~gH~~~V~sV~fs~-~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~ 1418 (1678)
....+-|-.+.|.+++|.. ....+ |+..+.+|++++.+..|. .+.+|......
T Consensus 292 ~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlS 370 (775)
T KOG0319|consen 292 SMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLS 370 (775)
T ss_pred ccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheee
Confidence 0111224456677777753 34444 677888888888887776 66666433111
Q ss_pred cC-----------CCCCCccccc--cc--c-ccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEEC
Q 000316 1419 GG-----------SPSSSISKIN--TD--Q-VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1482 (1678)
Q Consensus 1419 ~~-----------s~s~~~~~~~--~~--~-~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl 1482 (1678)
.. +.+.....+. +. . ..+-..++|++.|.++++... ....++++|.|+++++|++
T Consensus 371 L~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~---------~asffvsvS~D~tlK~W~l 441 (775)
T KOG0319|consen 371 LDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKL---------GASFFVSVSQDCTLKLWDL 441 (775)
T ss_pred eeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeeccc---------CccEEEEecCCceEEEecC
Confidence 11 1111111110 00 0 011122345555555555322 2457899999999999999
Q ss_pred CCCee---eEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEE
Q 000316 1483 NQGQK---LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTK 1559 (1678)
Q Consensus 1483 ~tg~~---l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~s 1559 (1678)
...+. ...+........|...|+||+++ |+..++||||.|.+.+||++..+....++.||+..|++
T Consensus 442 ~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia-----------~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~ 510 (775)
T KOG0319|consen 442 PKSKETAFPIVLTCRYTERAHDKDINCVAIA-----------PNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWC 510 (775)
T ss_pred CCcccccccceehhhHHHHhhcccccceEec-----------CCCceEEecccccceeeecccCceEEEEeeCCccceEE
Confidence 86322 12222222223567789999986 44569999999999999999999999999999999999
Q ss_pred EE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCccee
Q 000316 1560 LA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRL 1635 (1678)
Q Consensus 1560 va-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~ 1635 (1678)
|. +++++.++|+|.|+||+||.+.+. .++.++.||+..|. +|-.+|+.|+||+.|| |++|++.. +.+.
T Consensus 511 V~Fs~~dq~laT~SgD~TvKIW~is~f--SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt-----~eC~- 582 (775)
T KOG0319|consen 511 VSFSKNDQLLATCSGDKTVKIWSISTF--SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKT-----NECE- 582 (775)
T ss_pred EEeccccceeEeccCCceEEEEEeccc--eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccc-----hhhh-
Confidence 99 999999999999999999999998 78999999999999 5999999999999999 99999862 1111
Q ss_pred ccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1636 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1636 ~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
... ..|...|++++.+|+...++||+.||.|.+|
T Consensus 583 ---~tl-----D~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~w 616 (775)
T KOG0319|consen 583 ---MTL-----DAHNDRVWALSVSPLLDMFVTGGGDGRIIFW 616 (775)
T ss_pred ---hhh-----hhccceeEEEeecCccceeEecCCCeEEEEe
Confidence 111 2589999999999999999999999999999
|
|
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=292.18 Aligned_cols=272 Identities=14% Similarity=0.211 Sum_probs=223.1
Q ss_pred CCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCC
Q 000316 1283 EPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT 1361 (1678)
Q Consensus 1283 ~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~ 1361 (1678)
...|+++-.|..- +++|+.|.+|++||.+ -.+++.+.||+|+|.|+.|.. +.++|||. |.||++||++
T Consensus 197 skgVYClQYDD~k-----iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSS----DsTvrvWDv~ 265 (499)
T KOG0281|consen 197 SKGVYCLQYDDEK-----IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSS----DSTVRVWDVN 265 (499)
T ss_pred CCceEEEEecchh-----hhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCC----CceEEEEecc
Confidence 3567776655543 9999999999999988 568999999999999999965 49999998 9999999999
Q ss_pred CCeEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccC
Q 000316 1362 RINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440 (1678)
Q Consensus 1362 tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~ 1440 (1678)
+|+++.++-+|...|..+.|+ ++-++ +|.|.+|.+||+.+..-+. -+....
T Consensus 266 tge~l~tlihHceaVLhlrf~-ng~mvtcSkDrsiaVWdm~sps~it---------------------------~rrVLv 317 (499)
T KOG0281|consen 266 TGEPLNTLIHHCEAVLHLRFS-NGYMVTCSKDRSIAVWDMASPTDIT---------------------------LRRVLV 317 (499)
T ss_pred CCchhhHHhhhcceeEEEEEe-CCEEEEecCCceeEEEeccCchHHH---------------------------HHHHHh
Confidence 999999999999999999984 33333 5559999999987543110 001112
Q ss_pred CCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcc
Q 000316 1441 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGA 1520 (1678)
Q Consensus 1441 ~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~ 1520 (1678)
+|-..|..+.|+ .++++++|.|.||++|++.+++.+.++.+|... |.|+.+
T Consensus 318 GHrAaVNvVdfd------------~kyIVsASgDRTikvW~~st~efvRtl~gHkRG------IAClQY----------- 368 (499)
T KOG0281|consen 318 GHRAAVNVVDFD------------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG------IACLQY----------- 368 (499)
T ss_pred hhhhheeeeccc------------cceEEEecCCceEEEEeccceeeehhhhccccc------ceehhc-----------
Confidence 344456666665 459999999999999999999999999987654 334332
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCC-------CCeEe
Q 000316 1521 VASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPS-------QPTVF 1593 (1678)
Q Consensus 1521 ~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~-------~~~~l 1593 (1678)
.|.++++||+|.+|++||+..|++++.++||+.-|.++.. |.+.++||+.||+|+|||+..+... ++.++
T Consensus 369 --r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRF-d~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~l 445 (499)
T KOG0281|consen 369 --RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 445 (499)
T ss_pred --cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheee-cCceeeeccccceEEEEecccccCCcccccchHHHhh
Confidence 4579999999999999999999999999999999999985 4568999999999999999886432 45567
Q ss_pred ecCCCCEEEEEecCCEEEEEeCCC-eEEEecCC
Q 000316 1594 KGHTNGISGFSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1594 ~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~ 1625 (1678)
..|++.|..+..|...+++++-|. |-+||..+
T Consensus 446 v~hsgRVFrLQFD~fqIvsssHddtILiWdFl~ 478 (499)
T KOG0281|consen 446 VEHSGRVFRLQFDEFQIISSSHDDTILIWDFLN 478 (499)
T ss_pred hhccceeEEEeecceEEEeccCCCeEEEEEcCC
Confidence 789999999999999999988877 99999864
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-29 Score=267.41 Aligned_cols=264 Identities=14% Similarity=0.211 Sum_probs=217.5
Q ss_pred CEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCce--eEEecccCccc
Q 000316 1340 CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKL--LSVFAEQSMDS 1416 (1678)
Q Consensus 1340 ~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~--~~~l~~~~~~~ 1416 (1678)
-+|+|+| ||.|||+|.+.||.|..+++--...|+.+.+.|+.+.| +.+...||+||+++++. +.++..|
T Consensus 11 viLvsA~----YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h---- 82 (311)
T KOG0315|consen 11 VILVSAG----YDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGH---- 82 (311)
T ss_pred eEEEecc----CcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEecc----
Confidence 4677777 69999999999999999999777899999999999998 56689999999998764 5555543
Q ss_pred cccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCC
Q 000316 1417 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496 (1678)
Q Consensus 1417 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~ 1496 (1678)
... |+.+.|..+|+.+++|++||++||||+|...+.+.++
T Consensus 83 --------------------------~kN----------VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~---- 122 (311)
T KOG0315|consen 83 --------------------------TKN----------VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQ---- 122 (311)
T ss_pred --------------------------CCc----------eEEEEEeecCeEEEecCCCceEEEEeccCcccchhcc----
Confidence 223 4555555679999999999999999999976666555
Q ss_pred cccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe-ccCCCeEEEE-cCCCCEEEEEeCC
Q 000316 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKLA-APEDHLLVSSSLD 1574 (1678)
Q Consensus 1497 ~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~-gH~~~V~sva-spdg~~LaSgS~D 1574 (1678)
+.+.|++|+.. |+..-|++|..+|.|++||+++..+...+. .-..+|.+++ .|||.+|+.+..-
T Consensus 123 ---~~spVn~vvlh-----------pnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnk 188 (311)
T KOG0315|consen 123 ---HNSPVNTVVLH-----------PNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNK 188 (311)
T ss_pred ---CCCCcceEEec-----------CCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCC
Confidence 56789999886 444689999999999999999887666554 3457899999 9999999999999
Q ss_pred CcEEEEEcCCCC----CCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCC
Q 000316 1575 KTLRIWDLRRNW----PSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGA 1647 (1678)
Q Consensus 1575 gtI~IWDl~~~~----~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~ 1647 (1678)
|+.++|++-+.. ..++..++.|.+-+.. +|||+++||++|.|+ ++||+++. . -++.....
T Consensus 189 G~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~------~-----~kle~~l~-- 255 (311)
T KOG0315|consen 189 GNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDD------F-----FKLELVLT-- 255 (311)
T ss_pred ccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCC------c-----eeeEEEee--
Confidence 999999987643 2345578899998883 999999999999999 99999752 1 13333333
Q ss_pred CccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1648 KNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1648 ~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+|..-+.+++||.|+++|+||+.|+++|+|+
T Consensus 256 gh~rWvWdc~FS~dg~YlvTassd~~~rlW~ 286 (311)
T KOG0315|consen 256 GHQRWVWDCAFSADGEYLVTASSDHTARLWD 286 (311)
T ss_pred cCCceEEeeeeccCccEEEecCCCCceeecc
Confidence 4888999999999999999999999999996
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=309.94 Aligned_cols=142 Identities=18% Similarity=0.169 Sum_probs=122.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|+++ .++..||+|.+++....... ...+. +|+.+++.+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~h~~i~~~~~~~~ 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELK------GTDELYAVKVLKKDVILQDDDVECTM--------TEKRVLALAGKHPFLTQLHSCFQ 66 (318)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999999965 46788999999764322222 22223 788898887 7999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~ 142 (318)
T cd05570 67 TKDRLFFVMEYVNGGDLMFHIQ--RSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--HIKIADFGM 142 (318)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--cEEecccCC
Confidence 99999999999985 9999887 345789999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (318)
T cd05570 143 CKE 145 (318)
T ss_pred Cee
Confidence 874
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=302.16 Aligned_cols=149 Identities=19% Similarity=0.238 Sum_probs=129.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++++.||+|+||.||+|++. .++..||+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNK------KTGQIVAMKKIRLESEEEGVPSTAI--------REISLLKELQHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEEC------CCCcEEEEEEeccccccCCchHHHH--------HHHHHHHhcCCCCEeeeEE
Confidence 5899999999999999999964 4678999999865432222222333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+++.+|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 144 (285)
T cd07861 67 VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG--VIKLAD 144 (285)
T ss_pred EEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC--cEEECc
Confidence 999999999999999999999987533 35689999999999999999999999999999999999999999 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 145 fg~~~~ 150 (285)
T cd07861 145 FGLARA 150 (285)
T ss_pred ccceee
Confidence 999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=309.75 Aligned_cols=142 Identities=16% Similarity=0.118 Sum_probs=120.9
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhcc-CCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~-l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||+||+|++. .++..||+|.++...... ....... .|..+++. ++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~iv~~~~~~~ 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELK------GTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCcCcceEEEEE
Confidence 47999999999999965 467889999997642211 1122222 78888875 48999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|.+++. ....+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~ey~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05619 67 TKENLFFVMEYLNGGDLMFHIQ--SCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999984 9999998 345688999999999999999999999999999999999999999 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 143 ~~~ 145 (316)
T cd05619 143 CKE 145 (316)
T ss_pred ceE
Confidence 874
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-30 Score=314.29 Aligned_cols=182 Identities=18% Similarity=0.146 Sum_probs=152.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|++. .++..||+|...... .++|+.+++.++||||+++
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~valK~~~~~~----------------~~~E~~~l~~l~h~~iv~~ 122 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKP------GQPDPVVLKIGQKGT----------------TLIEAMLLQNVNHPSVIRM 122 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEEC------CCCceEEEEeCCccc----------------cHHHHHHHHhCCCCCCcCh
Confidence 347999999999999999999964 457789999854321 1279999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++......++||||+.++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 123 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kl~ 199 (357)
T PHA03209 123 KDTLVSGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIG 199 (357)
T ss_pred hheEEeCCeeEEEEEccCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999999999999874 345689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++...... ......||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 200 DfG~a~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl 246 (357)
T PHA03209 200 DLGAAQFPVVAP------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVL 246 (357)
T ss_pred cCccccccccCc------------ccccccccccccCCeecCCCCCCchhhHHHHHHHH
Confidence 999997432110 01123478889999988887888888888888553
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=315.20 Aligned_cols=172 Identities=17% Similarity=0.189 Sum_probs=145.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|+++..||.|+||.||+|.++ +++...|.|+|.. ..+....+++ -||.||..++||+||+|
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nk------et~~lAAaKvIet--kseEELEDyl--------VEIeILa~CdHP~ivkL 94 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNK------ETKLLAAAKVIET--KSEEELEDYL--------VEIEILAECDHPVIVKL 94 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcc------cchhhhhhhhhcc--cchhHHhhhh--------hhhhhhhcCCChHHHHH
Confidence 346899999999999999999964 5777788898865 3455666777 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.|..++.++|+.|||+| -...++- .-...+++.+++.+++|+|.||.|||+++|||||||..|||++-+| .++|
T Consensus 95 l~ayy~enkLwiliEFC~GGAVDaiml-EL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG--dirL 171 (1187)
T KOG0579|consen 95 LSAYYFENKLWILIEFCGGGAVDAIML-ELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG--DIRL 171 (1187)
T ss_pred HHHHhccCceEEEEeecCCchHhHHHH-HhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC--cEee
Confidence 9999999999999999997 5555554 3567799999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
+|||.+..+.... .....+.|||+|||||+..
T Consensus 172 ADFGVSAKn~~t~-----------qkRDsFIGTPYWMAPEVvm 203 (1187)
T KOG0579|consen 172 ADFGVSAKNKSTR-----------QKRDSFIGTPYWMAPEVVM 203 (1187)
T ss_pred ecccccccchhHH-----------hhhccccCCcccccchhee
Confidence 9999987544211 1122356999999999864
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-30 Score=303.44 Aligned_cols=149 Identities=15% Similarity=0.082 Sum_probs=128.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH-HHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.|++.+.||+|+||.||++.+. .++..||+|.+.......... ..+. +|+.+++.++||||++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEc------CCCceEEEEEEehhhhhhhhhHHHHH--------HHHHHHHhcCCCCEeeee
Confidence 4899999999999999999964 467899999987543222221 2223 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+++||||++ |+|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~ 144 (285)
T cd05605 67 YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred eeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 4999888754455689999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 145 Dfg~~~~ 151 (285)
T cd05605 145 DLGLAVE 151 (285)
T ss_pred eCCCcee
Confidence 9999874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=275.83 Aligned_cols=282 Identities=18% Similarity=0.340 Sum_probs=230.5
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCC-CCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcE
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT-RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1395 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~-tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtV 1395 (1678)
.+..+.||.+.|+.+.|+|+|..++|||. |..|.+|++. .-+-...++||+++|..+.|..++..+.|+ |++|
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~----Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGS----DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCC----cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 45567899999999999999999999996 9999999964 445567789999999999999999998554 9999
Q ss_pred EEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCC-CEEEEEECC
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVGIGN 1474 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g-~~Lasgs~D 1474 (1678)
+.||.++|++++.++.|... +.++. .+.-| .++.+|+.|
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~------------------------------vNs~~----------p~rrg~~lv~SgsdD 154 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSF------------------------------VNSLD----------PSRRGPQLVCSGSDD 154 (338)
T ss_pred EEEecccceeeehhccccce------------------------------eeecC----------ccccCCeEEEecCCC
Confidence 99999999999888876432 11111 11113 356789999
Q ss_pred CcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC
Q 000316 1475 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1554 (1678)
Q Consensus 1475 gtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~ 1554 (1678)
+++|+||+|+...++++... -.+.+++|. ..+.-+.+|+-|+.|++||++.+.....++||.
T Consensus 155 ~t~kl~D~R~k~~~~t~~~k-------yqltAv~f~-----------d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~ 216 (338)
T KOG0265|consen 155 GTLKLWDIRKKEAIKTFENK-------YQLTAVGFK-----------DTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHA 216 (338)
T ss_pred ceEEEEeecccchhhccccc-------eeEEEEEec-----------ccccceeeccccCceeeeccccCcceEEeeccc
Confidence 99999999999888877532 236777774 334679999999999999999999999999999
Q ss_pred CCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCC--CCCeEeecCCCCEE------EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1555 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP--SQPTVFKGHTNGIS------GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1555 ~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~--~~~~~l~gH~~~V~------afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
+.|+.+. +++|.++.|-+.|.++++||++--.+ +++..+.||..... +|||+++.+.+|+.|+ +++||..
T Consensus 217 DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~ 296 (338)
T KOG0265|consen 217 DTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTT 296 (338)
T ss_pred CceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecc
Confidence 9999999 99999999999999999999987432 34567777765332 5999999999999999 9999963
Q ss_pred CCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEE
Q 000316 1625 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1676 (1678)
Q Consensus 1625 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrI 1676 (1678)
. ..-+|.. . +|.+.|++++|+|...++.+|+.|.+|.+
T Consensus 297 ~-----------r~~lykl-p--Gh~gsvn~~~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 297 S-----------RRILYKL-P--GHYGSVNEVDFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred c-----------ccEEEEc-C--CcceeEEEeeecCCCcEEEEeccCceeEe
Confidence 1 1122221 2 58999999999999999999999999875
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=309.48 Aligned_cols=231 Identities=20% Similarity=0.414 Sum_probs=208.9
Q ss_pred ecCCCCCCCCCeEEEEeCCCCEEEEeCCC--------------------------------ceeEEeccccccEEEEEEe
Q 000316 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKA--------------------------------SILSSIRAHHGALRSVAVG 1336 (1678)
Q Consensus 1289 fSpdg~~~~~~~LasgS~D~~v~lWd~~~--------------------------------~~l~tl~gH~~~V~svafs 1336 (1678)
||+|++. ||.|-.|-.|++|.+.. ...+++.||+++|..+.|+
T Consensus 386 fSddssm-----lA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFs 460 (707)
T KOG0263|consen 386 FSDDSSM-----LACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFS 460 (707)
T ss_pred ecCCcch-----hhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeec
Confidence 8888886 88888899999998651 1245688999999999999
Q ss_pred cCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCc
Q 000316 1337 QDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM 1414 (1678)
Q Consensus 1337 pdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~ 1414 (1678)
|+.++|+|||. |++||+|++.+..++..++||..+|++|.|+|-|-++||+ |+|.++|.....++++.+.+|-.
T Consensus 461 Pd~rfLlScSE----D~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghls 536 (707)
T KOG0263|consen 461 PDRRFLLSCSE----DSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLS 536 (707)
T ss_pred ccccceeeccC----CcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccccc
Confidence 99999999998 9999999999999999999999999999999999998554 99999999998888888877642
Q ss_pred cccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCC
Q 000316 1415 DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1494 (1678)
Q Consensus 1415 ~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~ 1494 (1678)
+ +.|+.|+|+..++++||.|.+||+||+.+|..++.|.||
T Consensus 537 D----------------------------------------V~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH 576 (707)
T KOG0263|consen 537 D----------------------------------------VDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH 576 (707)
T ss_pred c----------------------------------------cceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC
Confidence 2 677888888999999999999999999999999999865
Q ss_pred CCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeC
Q 000316 1495 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSL 1573 (1678)
Q Consensus 1495 ~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~ 1573 (1678)
.+.|.+++|+ |+|.+||+|+.||.|.+||+.+|+++..+.+|++.|++|. +.+|..||+||.
T Consensus 577 ------~~~V~al~~S-----------p~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~ 639 (707)
T KOG0263|consen 577 ------KGPVTALAFS-----------PCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGA 639 (707)
T ss_pred ------CCceEEEEEc-----------CCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCC
Confidence 4568999986 5668999999999999999999999999999999999999 999999999999
Q ss_pred CCcEEEEEcCCC
Q 000316 1574 DKTLRIWDLRRN 1585 (1678)
Q Consensus 1574 DgtI~IWDl~~~ 1585 (1678)
|.+|++||+...
T Consensus 640 DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 640 DNSVRLWDLTKV 651 (707)
T ss_pred CCeEEEEEchhh
Confidence 999999999764
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-30 Score=304.56 Aligned_cols=153 Identities=27% Similarity=0.259 Sum_probs=130.7
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNI 237 (1678)
++..++|++.+.||+|+||.||+|.++ .++..||+|.+............. .+|+.+++.++|+||
T Consensus 3 ~~~~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~--------~~E~~~l~~l~h~~i 68 (309)
T cd07845 3 CRSVTEFEKLNRIGEGTYGIVYRARDT------TSGEIVALKKVRMDNERDGIPISS--------LREITLLLNLRHPNI 68 (309)
T ss_pred cccccceeEeeeeeecCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCCcchh--------hHHHHHHHhCCCCCC
Confidence 345789999999999999999999965 467899999987543222111122 389999999999999
Q ss_pred cceeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 238 APVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 238 V~l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+++++++... +.+++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-- 145 (309)
T cd07845 69 VELKEVVVGKHLDSIFLVMEYCEQDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG-- 145 (309)
T ss_pred cceEEEEecCCCCeEEEEEecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--
Confidence 9999999765 578999999999999998843 35689999999999999999999999999999999999999999
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 146 ~~kL~dfg~~~~ 157 (309)
T cd07845 146 CLKIADFGLART 157 (309)
T ss_pred CEEECccceeee
Confidence 899999999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-30 Score=323.23 Aligned_cols=152 Identities=14% Similarity=0.074 Sum_probs=130.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||+||+|++. .++..||||.+............+. +|+.+|..++|+||+++
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~------~~g~~vAvK~i~~~~~~~~~~~~~~--------~Ei~~l~~~~h~~iv~~ 96 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRV------SDGEPFAVKVVDMEGMSEADKNRAQ--------AEVCCLLNCDFFSIVKC 96 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEc------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHhcCCCCcEEEe
Confidence 468999999999999999999864 5688999999977555444444444 89999999999999999
Q ss_pred eeEEEeCC--------eEEEeccCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe
Q 000316 241 LGLLKTSG--------LITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 241 ~~~~~~~~--------~~~lVmEy~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 309 (1678)
++.+...+ .+++||||++ |+|.+++... ....+++..+..++.|++.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl 176 (496)
T PTZ00283 97 HEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL 176 (496)
T ss_pred ecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE
Confidence 98876433 4789999999 5999998742 23568999999999999999999999999999999999999
Q ss_pred cCCCceeEEEEecCCcccC
Q 000316 310 TDSCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 310 ~~~g~~~lKL~DFGlA~~~ 328 (1678)
+.++ .+||+|||+++..
T Consensus 177 ~~~~--~vkL~DFGls~~~ 193 (496)
T PTZ00283 177 CSNG--LVKLGDFGFSKMY 193 (496)
T ss_pred eCCC--CEEEEecccCeec
Confidence 9998 8999999999853
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=279.80 Aligned_cols=282 Identities=18% Similarity=0.338 Sum_probs=235.4
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~D 1352 (1678)
..-+.||.+||.+ +.|...| ++|||.|++++|||+. |.+..++.||-..|+.|++|+-..++++|+. |
T Consensus 144 ~rVi~gHlgWVr~vavdP~n~w-----f~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge----d 214 (460)
T KOG0285|consen 144 YRVISGHLGWVRSVAVDPGNEW-----FATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE----D 214 (460)
T ss_pred hhhhhhccceEEEEeeCCCcee-----EEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC----C
Confidence 3457799999997 7777777 9999999999999998 7888999999999999999999999999997 8
Q ss_pred CeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccc
Q 000316 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1678)
Q Consensus 1353 gtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~ 1430 (1678)
+.|+.||++..+.++.|.||-..|++++.+|....++++ |.++|+||+++...+.++.+|.
T Consensus 215 k~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~----------------- 277 (460)
T KOG0285|consen 215 KQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHT----------------- 277 (460)
T ss_pred CeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCC-----------------
Confidence 999999999999999999999999999999998888544 9999999999999998888764
Q ss_pred cccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEee
Q 000316 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1678)
Q Consensus 1431 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1510 (1678)
..|.++.+. |-..++++||.|++|++||++.|+...++..| ...|+++|..
T Consensus 278 -------------~~V~~V~~~----------~~dpqvit~S~D~tvrlWDl~agkt~~tlt~h------kksvral~lh 328 (460)
T KOG0285|consen 278 -------------NPVASVMCQ----------PTDPQVITGSHDSTVRLWDLRAGKTMITLTHH------KKSVRALCLH 328 (460)
T ss_pred -------------CcceeEEee----------cCCCceEEecCCceEEEeeeccCceeEeeecc------cceeeEEecC
Confidence 234444444 34678999999999999999999998888754 4458888876
Q ss_pred CCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCC
Q 000316 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQP 1590 (1678)
Q Consensus 1511 ~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1590 (1678)
|. -..+|+++.| .|+-|++-.|..++.+.+|..-|++++...+.++++|+..|.|..||.+++..-+.
T Consensus 329 P~-----------e~~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dng~~~fwdwksg~nyQ~ 396 (460)
T KOG0285|consen 329 PK-----------ENLFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDNGSIMFWDWKSGHNYQR 396 (460)
T ss_pred Cc-----------hhhhhccCCc-cceeccCCccchhhccccccceeeeeeeccCceEEEcCCceEEEEEecCcCccccc
Confidence 43 3578888876 69999999999999999999999999954556999999999999999998742111
Q ss_pred e-Eee--c---CCCCEE--EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1591 T-VFK--G---HTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1591 ~-~l~--g---H~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
. +.. | ...+|. ||...|..|++|..|+ |++|.-.
T Consensus 397 ~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 397 GQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 1 111 1 123455 4777899999999999 9999853
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=303.98 Aligned_cols=143 Identities=21% Similarity=0.233 Sum_probs=118.1
Q ss_pred eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
..+||+|+||.||+|+++ ...++..+|+|.+...... ..+. +|+.+|+.++||||+++++++..
T Consensus 6 g~~lG~G~~g~Vy~~~~~----~~~~~~~~a~k~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRK----DGKDEKEYALKQIEGTGIS----MSAC--------REIALLRELKHPNVIALQKVFLS 69 (317)
T ss_pred ceEeccCCCeeEEEEEec----CCCccceEEEEEecCCCCc----HHHH--------HHHHHHHhCCCCCeeeEEEEEec
Confidence 468999999999999853 1235688999998653221 1222 89999999999999999999854
Q ss_pred --CCeEEEeccCCCCCHHHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec----CCC
Q 000316 247 --SGLITSVIPKTPYTLENILQFS-------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 313 (1678)
Q Consensus 247 --~~~~~lVmEy~~g~L~~~l~~~-------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~----~~g 313 (1678)
+..+++||||++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+. .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 149 (317)
T cd07867 70 HSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred cCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCC
Confidence 4578999999999999888632 123578999999999999999999999999999999999994 445
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 150 --~~kl~DfG~a~~ 161 (317)
T cd07867 150 --RVKIADMGFARL 161 (317)
T ss_pred --cEEEeeccceec
Confidence 899999999974
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=304.12 Aligned_cols=286 Identities=22% Similarity=0.319 Sum_probs=230.3
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCC-------------------------------CeEEE
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-------------------------------INCVS 1367 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~t-------------------------------g~~l~ 1367 (1678)
|..++..-...|+|..|++|+..+|.|-. |..|++|.+.. +....
T Consensus 370 c~YT~~nt~~~v~ca~fSddssmlA~Gf~----dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~ 445 (707)
T KOG0263|consen 370 CMYTFHNTYQGVTCAEFSDDSSMLACGFV----DSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSR 445 (707)
T ss_pred EEEEEEEcCCcceeEeecCCcchhhcccc----ccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeE
Confidence 56666666678999999999998888887 89999999752 11244
Q ss_pred EEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCC
Q 000316 1368 GYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSG 1445 (1678)
Q Consensus 1368 ~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~ 1445 (1678)
++.||+++|+++.|+|+.+.|.|| |++||+|.+.+..++-.+.+| ..+
T Consensus 446 ~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH------------------------------~~P 495 (707)
T KOG0263|consen 446 TLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGH------------------------------LAP 495 (707)
T ss_pred EeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCC------------------------------Ccc
Confidence 588999999999999999999555 999999999999988777754 334
Q ss_pred eEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCC
Q 000316 1446 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1678)
Q Consensus 1446 v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~ 1525 (1678)
|+.+.|. |-|-++||+|.|++-++|......+++.+.+|. +.|.|+.|. |+.+
T Consensus 496 VwdV~F~----------P~GyYFatas~D~tArLWs~d~~~PlRifaghl------sDV~cv~FH-----------PNs~ 548 (707)
T KOG0263|consen 496 VWDVQFA----------PRGYYFATASHDQTARLWSTDHNKPLRIFAGHL------SDVDCVSFH-----------PNSN 548 (707)
T ss_pred eeeEEec----------CCceEEEecCCCceeeeeecccCCchhhhcccc------cccceEEEC-----------Cccc
Confidence 5555555 459999999999999999999888888888654 458889886 5557
Q ss_pred EEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--
Q 000316 1526 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG-- 1602 (1678)
Q Consensus 1526 ~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a-- 1602 (1678)
++|+||.|.+||+||+.+|..++.|.||.++|.+|+ +|+|++|+||+.||.|++||+.++ ..+..+.+|++.|.+
T Consensus 549 Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~--~~v~~l~~Ht~ti~Sls 626 (707)
T KOG0263|consen 549 YVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG--SLVKQLKGHTGTIYSLS 626 (707)
T ss_pred ccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC--cchhhhhcccCceeEEE
Confidence 999999999999999999999999999999999999 999999999999999999999998 667899999999995
Q ss_pred EEecCCEEEEEeCCC-eEEEecCCCCCC--CCcceec----------cceeeeeecCCCccCcEEEEEEecCCCEEEEEe
Q 000316 1603 FSVWGQDVISISNNK-IGLSSLSKSADE--DGQHRLV----------PQKLYMVDNGAKNLSVLSSISILPFSRLFLVGT 1669 (1678)
Q Consensus 1603 fSpdg~~LaSgs~D~-I~vwdl~~~~~~--~g~~~~~----------~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs 1669 (1678)
||.||..||+||.|. |++||+...... .+..... ..-+.... .....+|..+.|..-.-.|++|.
T Consensus 627 FS~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~--~tK~tpv~~l~FtrrNl~L~~g~ 704 (707)
T KOG0263|consen 627 FSRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSF--YTKNTPVVGLHFTRRNLLLAVGP 704 (707)
T ss_pred EecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeee--eecCceEEEEEEeccceeEEecc
Confidence 999999999999999 999998643221 0000000 00011111 13456899999998776676664
|
|
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-30 Score=300.09 Aligned_cols=142 Identities=17% Similarity=0.105 Sum_probs=121.4
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
||+|+||+||++.++ .+++.+|+|.+.+....... ...+. .|+.+|+.++||||+++++++..+.
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~~~~~~~~ 66 (280)
T cd05608 1 LGKGGFGEVSACQMR------ATGKLYACKKLNKKRLKKRKGYEGAM--------VEKRILAKVHSRFIVSLAYAFQTKT 66 (280)
T ss_pred CCCCCceeEEEEEEc------cCCcEEEEEeeeHHHHhhhHHHHHHH--------HHHHHHHhCCCCcEeeeeEEEcCCC
Confidence 799999999999965 46789999998754322221 12223 8999999999999999999999999
Q ss_pred eEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 249 LITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+|+||||++| +|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~ 144 (280)
T cd05608 67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--NVRISDLGLA 144 (280)
T ss_pred eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCccc
Confidence 99999999985 99888753 1345689999999999999999999999999999999999999988 8999999998
Q ss_pred cc
Q 000316 326 GF 327 (1678)
Q Consensus 326 ~~ 327 (1678)
+.
T Consensus 145 ~~ 146 (280)
T cd05608 145 VE 146 (280)
T ss_pred ee
Confidence 74
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-28 Score=288.62 Aligned_cols=360 Identities=13% Similarity=0.134 Sum_probs=277.7
Q ss_pred ccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC---ceeEEeccccccEEEEEEecCCCEEEEEecCCCC
Q 000316 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA---SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1678)
Q Consensus 1277 ~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~---~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~ 1351 (1678)
.+..||-+-|.+ ||.|..+ |++||.|-++|+|.+++ -....+.||.+.|-..-|..|...++|-|.
T Consensus 139 r~~~g~fddi~si~Ws~DSr~-----l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvsk---- 209 (893)
T KOG0291|consen 139 RTYLGHFDDITSIDWSDDSRL-----LVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSK---- 209 (893)
T ss_pred eeecCCccceeEEEeccCCce-----EEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEec----
Confidence 567788888876 8888876 99999999999999883 356788999999999999999999999998
Q ss_pred CCeEEEEeCCC-----------------------CeE-----------EEEEecCCccEEEEeecCCCCcEEeC--CCcE
Q 000316 1352 KGTVQKWELTR-----------------------INC-----------VSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1395 (1678)
Q Consensus 1352 DgtVrlWDl~t-----------------------g~~-----------l~~l~gH~~~V~sV~fs~~~~~laS~--DgtV 1395 (1678)
||.+.+|.... ++. ..-+..-...|++.+|++....++.+ .|..
T Consensus 210 dG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f 289 (893)
T KOG0291|consen 210 DGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEF 289 (893)
T ss_pred CceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCee
Confidence 99999998650 111 11122234789999999888877655 8899
Q ss_pred EEEECCCCceeEEecccCcc-ccccCCCCCCcccccccccccccc--CCCCCCeEEeeecCCceeEeEeecCCCEEEEEE
Q 000316 1396 HVWNSQTGKLLSVFAEQSMD-SLHGGSPSSSISKINTDQVGMLNS--NTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1472 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~-~~~~~s~s~~~~~~~~~~~~~~~~--~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs 1472 (1678)
.++++..-.+++.+...... ........+.-+.+.+....-+.. +.....|....-+-..++|++++|||..+|+|+
T Consensus 290 ~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~ 369 (893)
T KOG0291|consen 290 GLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGA 369 (893)
T ss_pred EEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEecc
Confidence 99999988888887754322 111122122222222222212221 222333333333445689999999999999999
Q ss_pred CCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 000316 1473 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1678)
Q Consensus 1473 ~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~g 1552 (1678)
.||.||+||..+|-|..+|..|+ +.|++++|. ..|+.+++.|-||+||.||+...+..+++..
T Consensus 370 eDgKVKvWn~~SgfC~vTFteHt------s~Vt~v~f~-----------~~g~~llssSLDGtVRAwDlkRYrNfRTft~ 432 (893)
T KOG0291|consen 370 EDGKVKVWNTQSGFCFVTFTEHT------SGVTAVQFT-----------ARGNVLLSSSLDGTVRAWDLKRYRNFRTFTS 432 (893)
T ss_pred CCCcEEEEeccCceEEEEeccCC------CceEEEEEE-----------ecCCEEEEeecCCeEEeeeecccceeeeecC
Confidence 99999999999999999999654 457888875 4568999999999999999999999999885
Q ss_pred cC-CCeEEEE-cCCCCEEEEEeCCC-cEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCC
Q 000316 1553 HD-GYVTKLA-APEDHLLVSSSLDK-TLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKS 1626 (1678)
Q Consensus 1553 H~-~~V~sva-spdg~~LaSgS~Dg-tI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~ 1626 (1678)
-. ....+|+ .|.|.++..|+.|. .|.||++++| +.+..+.||.++|. +|+|+|..|+|+|.|+ |++||+-.+
T Consensus 433 P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTG--qllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 433 PEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTG--QLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred CCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecC--eeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 43 3356777 88899999999887 5999999999 66779999999999 4999999999999999 999998522
Q ss_pred CCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1627 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1627 ~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.++. ... .+...+.+++|.|||+-||+++-||.|.+||
T Consensus 511 ---~~~v-----Etl------~i~sdvl~vsfrPdG~elaVaTldgqItf~d 548 (893)
T KOG0291|consen 511 ---SGTV-----ETL------EIRSDVLAVSFRPDGKELAVATLDGQITFFD 548 (893)
T ss_pred ---Ccee-----eeE------eeccceeEEEEcCCCCeEEEEEecceEEEEE
Confidence 1211 111 2567899999999999999999999999997
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=283.21 Aligned_cols=313 Identities=18% Similarity=0.248 Sum_probs=258.1
Q ss_pred CCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC---c--eeEEec------cc----cccEEEEEEecCCCEEEE
Q 000316 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA---S--ILSSIR------AH----HGALRSVAVGQDECTVFT 1344 (1678)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~---~--~l~tl~------gH----~~~V~svafspdg~~LaS 1344 (1678)
|+..|.+ ++|-.. .++++|+.|-+.++|++.. . ....|+ |+ +..|++++|+.+|..||+
T Consensus 177 ~~~~V~~~~WnP~~~----~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 177 HESEVFICAWNPLRD----GLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred CCCceEEEecCchhh----hhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 8888874 666444 1289999999999999762 1 111122 22 357999999999999999
Q ss_pred EecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEe--CCCcEEEEECCCCceeEEecccCccccccCCC
Q 000316 1345 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1678)
Q Consensus 1345 gS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS--~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~ 1422 (1678)
|+- ||.+|+|+.. |..+.++..|.++|.++.|+..|.++.| .|+|+.+||..+|+..+.+..|+..
T Consensus 253 G~~----~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~------- 320 (524)
T KOG0273|consen 253 GSE----DGEARIWNKD-GNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAP------- 320 (524)
T ss_pred eec----CcEEEEEecC-chhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCC-------
Confidence 995 9999999964 6788889999999999999999999844 4999999999999998888765422
Q ss_pred CCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCC
Q 000316 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1678)
Q Consensus 1423 s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~ 1502 (1678)
-..+.|. +...+++++.|+.|+++-+....++.++.+|++
T Consensus 321 -----------------------~lDVdW~-----------~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g------ 360 (524)
T KOG0273|consen 321 -----------------------ALDVDWQ-----------SNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHG------ 360 (524)
T ss_pred -----------------------ccceEEe-----------cCceEeecCCCceEEEEEecCCCcceeeecccC------
Confidence 1223333 245799999999999999999999999997654
Q ss_pred cceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCC---------CEEEEEe
Q 000316 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APED---------HLLVSSS 1572 (1678)
Q Consensus 1503 ~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg---------~~LaSgS 1572 (1678)
.|.++.|+ |.|.+|+++|+|++++||....+.....+.+|+..|..+. +|+| ..+++++
T Consensus 361 ~V~alk~n-----------~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 361 EVNALKWN-----------PTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred ceEEEEEC-----------CCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEee
Confidence 47888876 4567999999999999999999999999999999998888 6644 5899999
Q ss_pred CCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCc
Q 000316 1573 LDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKN 1649 (1678)
Q Consensus 1573 ~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h 1649 (1678)
.|++|++||+..+ .++.+|..|+.+|.+ |||+|+++|+|+.|| |.+|++. ..+++....+
T Consensus 430 ~dstV~lwdv~~g--v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~------------~~~l~~s~~~--- 492 (524)
T KOG0273|consen 430 FDSTVKLWDVESG--VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTK------------TGKLVKSYQG--- 492 (524)
T ss_pred cCCeEEEEEccCC--ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEecccc------------chheeEeecC---
Confidence 9999999999999 778899999999994 999999999999999 9999974 2244444433
Q ss_pred cCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1650 LSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1650 ~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+.|..++|+.+|..+..+-.||.+.+.|
T Consensus 493 ~~~Ifel~Wn~~G~kl~~~~sd~~vcvld 521 (524)
T KOG0273|consen 493 TGGIFELCWNAAGDKLGACASDGSVCVLD 521 (524)
T ss_pred CCeEEEEEEcCCCCEEEEEecCCCceEEE
Confidence 45699999999999999999999998875
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-30 Score=300.48 Aligned_cols=148 Identities=20% Similarity=0.224 Sum_probs=128.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|++. .++..+|+|.+............+ .+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~------~~g~~~~~k~~~~~~~~~~~~~~~--------~~ei~~l~~l~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSA--------LREICLLKELKHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEEC------CCCcEEEEEEeecccccccCccch--------hHHHHHHHhcCCCCeeeHHH
Confidence 5899999999999999999965 467899999987542222211222 28999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
++.+...+++||||++++|.+++.. ....+++..++.++.||++||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~--~~~l~df 143 (284)
T cd07839 67 VLHSDKKLTLVFEYCDQDLKKYFDS-CNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG--ELKLADF 143 (284)
T ss_pred HhccCCceEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC--cEEECcc
Confidence 9999999999999999999998873 345689999999999999999999999999999999999999998 8999999
Q ss_pred CCccc
Q 000316 323 PLVGF 327 (1678)
Q Consensus 323 GlA~~ 327 (1678)
|+++.
T Consensus 144 g~~~~ 148 (284)
T cd07839 144 GLARA 148 (284)
T ss_pred chhhc
Confidence 99873
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-29 Score=317.80 Aligned_cols=150 Identities=13% Similarity=0.135 Sum_probs=127.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
..|.+.+.||+|+||.||+|.+.. ..+..||+|.+... . .......+ +|+.+|+.++|||||+++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~-----~~~~~vv~K~~~~~--~-~~~~~~~~-------~E~~~l~~l~Hpniv~~~ 131 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGS-----DPKEKVVAKFVMLN--D-ERQAAYAR-------SELHCLAACDHFGIVKHF 131 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcC-----CCCeEEEEEEcccC--C-HHHHHHHH-------HHHHHHHhCCCCCEeEEE
Confidence 359999999999999999998642 22567888876542 2 22222332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++..++.+||||||++ |+|.+++.. .....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 132 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--~~k 209 (478)
T PTZ00267 132 DDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--IIK 209 (478)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC--cEE
Confidence 99999999999999998 599998863 2345689999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccC
Q 000316 319 ICDKPLVGFN 328 (1678)
Q Consensus 319 L~DFGlA~~~ 328 (1678)
|+|||+++..
T Consensus 210 L~DFgla~~~ 219 (478)
T PTZ00267 210 LGDFGFSKQY 219 (478)
T ss_pred EEeCcCceec
Confidence 9999999853
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=308.25 Aligned_cols=275 Identities=20% Similarity=0.299 Sum_probs=237.3
Q ss_pred CCceE--eecCCCCCCCCCeEEEEeCCCCEEEEeCC-Cc--eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEE
Q 000316 1283 EPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIK-AS--ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQK 1357 (1678)
Q Consensus 1283 ~~~V~--~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~--~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrl 1357 (1678)
...|. .||++|.+ +++++.|+.+++|+.. .. .++++.+|...|++++|+|+++++++|+. |++||+
T Consensus 159 ~~sv~~~~fs~~g~~-----l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiri 229 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRA-----LAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRI 229 (456)
T ss_pred cCceEEEEEcCCCCe-----EEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC----CceEEE
Confidence 44554 49999998 9999999999999986 44 67888999999999999999999999997 999999
Q ss_pred EeC-CCCeEEEEEecCCccEEEEeecCCCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccc
Q 000316 1358 WEL-TRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1434 (1678)
Q Consensus 1358 WDl-~tg~~l~~l~gH~~~V~sV~fs~~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1434 (1678)
||+ ..+.++++++||...|++++|+|++..++ +.|++|||||+++++++..+..|..
T Consensus 230 wd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~-------------------- 289 (456)
T KOG0266|consen 230 WDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSD-------------------- 289 (456)
T ss_pred eeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCC--------------------
Confidence 999 66699999999999999999999997774 4599999999999999999987642
Q ss_pred cccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCe--eeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1435 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ--KLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1435 ~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~--~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
.+++++++++++.+++++.|+.|++||+.++. ++..+.++... . .+.+++|+
T Consensus 290 --------------------~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~---~-~~~~~~fs-- 343 (456)
T KOG0266|consen 290 --------------------GISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENS---A-PVTSVQFS-- 343 (456)
T ss_pred --------------------ceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCC---C-ceeEEEEC--
Confidence 25667777789999999999999999999998 56666655432 2 57888875
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE----cCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA----APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva----spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
++|.++++++.|+.+++||++.++.+..+.+|...++++. ++++.++++|+.|+.|++||+.++ .
T Consensus 344 ---------p~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~--~ 412 (456)
T KOG0266|consen 344 ---------PNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSG--G 412 (456)
T ss_pred ---------CCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCcc--c
Confidence 5668999999999999999999999999999988655553 678899999999999999999987 5
Q ss_pred CCeEeecC-CCCEE--EEEecCCEEEEEe--CCC-eEEEec
Q 000316 1589 QPTVFKGH-TNGIS--GFSVWGQDVISIS--NNK-IGLSSL 1623 (1678)
Q Consensus 1589 ~~~~l~gH-~~~V~--afSpdg~~LaSgs--~D~-I~vwdl 1623 (1678)
.+..+.+| ...|. ++++..+++++++ .|+ |++|..
T Consensus 413 ~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 413 ILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY 453 (456)
T ss_pred hhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence 66788999 66666 4899999999987 677 999985
|
|
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=307.85 Aligned_cols=164 Identities=23% Similarity=0.292 Sum_probs=136.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
-+||+|+||+||-|++. .+....|||.+.... + +.. + +.-.||.+.+.|+|.|||+++|.+..+
T Consensus 581 vVLGKGTYG~VYA~RD~------~tqvrIaIKEIpekd-s-r~~-Q-------PLhEEIaLH~~LrHkNIVrYLGs~sen 644 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDM------DTQVRIAIKEIPEKD-S-REV-Q-------PLHEEIALHSTLRHKNIVRYLGSVSEN 644 (1226)
T ss_pred EEeecCceeEEEeeccc------cceeEEEeeeccccc-c-hhh-c-------cHHHHHHHHHHHhhHhHHHHhhccCCC
Confidence 37999999999999965 567889999986532 1 111 1 222899999999999999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC-CCceeEEEEecC
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICDKP 323 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~g~~~lKL~DFG 323 (1678)
+.+-|.||-++| +|.++++. +-+++ .|..+-+|.+||++||.|||++.|||||||-+|+||+. .| .+||+|||
T Consensus 645 Gf~kIFMEqVPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySG--vlKISDFG 721 (1226)
T KOG4279|consen 645 GFFKIFMEQVPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSG--VLKISDFG 721 (1226)
T ss_pred CeEEEEeecCCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccc--eEEecccc
Confidence 999999999995 99999984 55666 78889999999999999999999999999999999985 45 89999999
Q ss_pred CcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
.++...+.. -|.+.+.||..|||||++
T Consensus 722 TsKRLAgin-----------P~TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 722 TSKRLAGIN-----------PCTETFTGTLQYMAPEVI 748 (1226)
T ss_pred cchhhccCC-----------ccccccccchhhhChHhh
Confidence 998655321 134456689999999986
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=298.39 Aligned_cols=149 Identities=15% Similarity=0.103 Sum_probs=129.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH-HHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.|+..+.||+|+||.||+|.+. .+++.+|+|.+.......... ..+. +|+.+++.++|+||++++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGESMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEc------CCCceEEEEEEehhhccchHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 3788899999999999999965 578899999987643332222 2233 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+.+++.+++||||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~--~~~l~ 144 (285)
T cd05630 67 YAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999985 999998754555689999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 145 Dfg~~~~ 151 (285)
T cd05630 145 DLGLAVH 151 (285)
T ss_pred eccceee
Confidence 9999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=303.51 Aligned_cols=186 Identities=16% Similarity=0.183 Sum_probs=149.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|.+. .++..+|+|.+.... .......+. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCcccce
Confidence 468999999999999999999965 467889999986532 222223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++|.+++.+++||||++| +|.+++. ..+.+++..++.++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--~~k 144 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 144 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--CEE
Confidence 9999999999999999985 9999998 345688999999999999999999985 799999999999999998 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
|+|||+++...... .....|+..|+|||++.+..++.++|+|+.|++
T Consensus 145 L~Dfg~~~~~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i 191 (333)
T cd06650 145 LCDFGVSGQLIDSM-------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (333)
T ss_pred EeeCCcchhhhhhc-------------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHH
Confidence 99999987432100 011235667777777665555666666666633
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-28 Score=288.09 Aligned_cols=318 Identities=19% Similarity=0.288 Sum_probs=256.4
Q ss_pred CeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEE
Q 000316 1299 DFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1678)
Q Consensus 1299 ~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~ 1377 (1678)
.+||+|=..|...++++. ..+++.+.--...|..++|+..|..|+-|+. .=|.+-||++.+...+...+||...++
T Consensus 278 ~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~---klgQLlVweWqsEsYVlKQQgH~~~i~ 354 (893)
T KOG0291|consen 278 NLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCS---KLGQLLVWEWQSESYVLKQQGHSDRIT 354 (893)
T ss_pred eEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCC---ccceEEEEEeeccceeeecccccccee
Confidence 349999999999999987 6789999888889999999999999999996 246999999999999988999999999
Q ss_pred EEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCc
Q 000316 1378 DICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455 (1678)
Q Consensus 1378 sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1455 (1678)
+++++|||+.++++ ||.|||||..+|-|..+|..|.. .
T Consensus 355 ~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts----------------------------------------~ 394 (893)
T KOG0291|consen 355 SLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTS----------------------------------------G 394 (893)
T ss_pred eEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCC----------------------------------------c
Confidence 99999999999554 99999999999999999997742 2
Q ss_pred eeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCC-
Q 000316 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG- 1534 (1678)
Q Consensus 1456 vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg- 1534 (1678)
++.+.|+..|+.+++++-||+||.||+...+.-+++.... +....|++.. |.|.++.+|+.|.
T Consensus 395 Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~-----p~QfscvavD-----------~sGelV~AG~~d~F 458 (893)
T KOG0291|consen 395 VTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPE-----PIQFSCVAVD-----------PSGELVCAGAQDSF 458 (893)
T ss_pred eEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCC-----ceeeeEEEEc-----------CCCCEEEeeccceE
Confidence 5667777789999999999999999999999988887543 2223455543 5677888888875
Q ss_pred eEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEE
Q 000316 1535 QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVI 1611 (1678)
Q Consensus 1535 ~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~La 1611 (1678)
.|.+|++.||+++..+.||+++|.+++ +|++..|+|||+|+|||+||+-... ..+.++.- ...|. +|+|||+.||
T Consensus 459 ~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~-~~vEtl~i-~sdvl~vsfrPdG~ela 536 (893)
T KOG0291|consen 459 EIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSS-GTVETLEI-RSDVLAVSFRPDGKELA 536 (893)
T ss_pred EEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccC-ceeeeEee-ccceeEEEEcCCCCeEE
Confidence 699999999999999999999999999 9999999999999999999997653 33344443 33344 6999999999
Q ss_pred EEeCCC-eEEEecCCCCCC---CCcceec----cceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1612 SISNNK-IGLSSLSKSADE---DGQHRLV----PQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1612 Sgs~D~-I~vwdl~~~~~~---~g~~~~~----~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+++-|| |.+||....... +|..... ......... .....+.+.+++++||+.+++||..+.|.||+
T Consensus 537 VaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~-sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~ 610 (893)
T KOG0291|consen 537 VATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAEN-SAKGKTFTTICYSADGKCILAGGESNSICIYD 610 (893)
T ss_pred EEEecceEEEEEhhhceeeccccchhhccccccccceeehhh-cccCCceEEEEEcCCCCEEEecCCcccEEEEE
Confidence 999999 999997632211 1111111 111111110 12235789999999999999999999999985
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=326.56 Aligned_cols=175 Identities=18% Similarity=0.147 Sum_probs=138.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||.||+|++. ..+..+|+|.+............+. +|+.+|+.|+|||||++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk------~tg~~vAlKvIk~~~l~e~~~~~~~--------~EI~IL~~L~HPNIVrl 77 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHK------RTQEFFCWKAISYRGLKEREKSQLV--------IEVNVMRELKHKNIVRY 77 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCeEEEEEEEeccccCHHHHHHHH--------HHHHHHHHcCCCCcCeE
Confidence 578999999999999999999975 4678999999876544444444444 89999999999999999
Q ss_pred eeEEEeC--CeEEEeccCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-------CceecCCCCCCeE
Q 000316 241 LGLLKTS--GLITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-------GIAHRSVCPSNVL 308 (1678)
Q Consensus 241 ~~~~~~~--~~~~lVmEy~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-------gIiHRDLKP~NIL 308 (1678)
+++|.+. ..+||||||++ |+|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+|||
T Consensus 78 ~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL 157 (1021)
T PTZ00266 78 IDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF 157 (1021)
T ss_pred EEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence 9998654 57999999999 4999999742 235689999999999999999999994 5999999999999
Q ss_pred ecCCC---------------ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 309 LTDSC---------------WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 309 l~~~g---------------~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
|+.+. ...+||+|||+++...... ....+.||+.|+|||++
T Consensus 158 L~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------~~~s~vGTp~YmAPEvL 213 (1021)
T PTZ00266 158 LSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------MAHSCVGTPYYWSPELL 213 (1021)
T ss_pred eecCccccccccccccccCCCCceEEccCCccccccccc------------cccccCCCccccCHHHH
Confidence 96531 1258999999997532110 01123467777777764
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=259.99 Aligned_cols=285 Identities=18% Similarity=0.241 Sum_probs=227.9
Q ss_pred eeEEeccccccEEEEEEecC-CCEEEEEecCCCCCCeEEEEeCCC---CeEEEEE-ecCCccEEEEeecCCCCcE--EeC
Q 000316 1319 ILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTR---INCVSGY-YGHEEVVNDICVLSSSGRI--ASC 1391 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspd-g~~LaSgS~d~~~DgtVrlWDl~t---g~~l~~l-~gH~~~V~sV~fs~~~~~l--aS~ 1391 (1678)
.++++.||.+.|..++|+|- |..|+|||. |+.||+|+... -.|...+ .+|+..|.+|+|+|.+++| ||.
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~----Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGT----DKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecC----CceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeec
Confidence 47889999999999999998 899999998 99999999984 4555544 4899999999999999998 555
Q ss_pred CCcEEEEECCCC--ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEE
Q 000316 1392 DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1469 (1678)
Q Consensus 1392 DgtVrIWD~~tg--~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~La 1469 (1678)
|.|+.||.-..+ +++.++.+|. +.|.|++++++|++||
T Consensus 82 D~t~~Iw~k~~~efecv~~lEGHE----------------------------------------nEVK~Vaws~sG~~LA 121 (312)
T KOG0645|consen 82 DATVVIWKKEDGEFECVATLEGHE----------------------------------------NEVKCVAWSASGNYLA 121 (312)
T ss_pred cceEEEeecCCCceeEEeeeeccc----------------------------------------cceeEEEEcCCCCEEE
Confidence 999999986544 5667777653 2356777777899999
Q ss_pred EEECCCcEEEEECCCC---eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC---
Q 000316 1470 VGIGNGSLRFIDINQG---QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS--- 1543 (1678)
Q Consensus 1470 sgs~DgtVrlWDl~tg---~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t--- 1543 (1678)
+++.|+.|-+|.+..+ +++..++.|+ ..|.-+.|.|.. .+|+++|.|.+|++|+-..
T Consensus 122 TCSRDKSVWiWe~deddEfec~aVL~~Ht------qDVK~V~WHPt~-----------dlL~S~SYDnTIk~~~~~~ddd 184 (312)
T KOG0645|consen 122 TCSRDKSVWIWEIDEDDEFECIAVLQEHT------QDVKHVIWHPTE-----------DLLFSCSYDNTIKVYRDEDDDD 184 (312)
T ss_pred EeeCCCeEEEEEecCCCcEEEEeeecccc------ccccEEEEcCCc-----------ceeEEeccCCeEEEEeecCCCC
Confidence 9999999999998754 4566677654 446777877543 4899999999999998763
Q ss_pred CcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecCCEEEEEeCCC-eEEE
Q 000316 1544 GNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLS 1621 (1678)
Q Consensus 1544 g~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vw 1621 (1678)
-.+++++.+|...|++++ .+.|..|+|++.|++|+||...+.. -.-|+..++.++.+...++|++.|. |++|
T Consensus 185 W~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~------~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf 258 (312)
T KOG0645|consen 185 WECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL------SGMHSRALYDVPWDNGVIASGGGDDAIRLF 258 (312)
T ss_pred eeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc------chhcccceEeeeecccceEeccCCCEEEEE
Confidence 368999999999999999 8889999999999999999977652 1347788888777778899998888 9999
Q ss_pred ecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecC-CCEEEEEeCCCcEEEc
Q 000316 1622 SLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPF-SRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1622 dl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd-~~lLatgs~DG~IrIw 1677 (1678)
.-+...+.... ++..... ..|...|++++|+|. ..+|++||+||.|++|
T Consensus 259 ~~s~~~d~p~~------~l~~~~~-~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W 308 (312)
T KOG0645|consen 259 KESDSPDEPSW------NLLAKKE-GAHEVDVNSVQWNPKVSNRLASGGDDGIVNFW 308 (312)
T ss_pred EecCCCCCchH------HHHHhhh-cccccccceEEEcCCCCCceeecCCCceEEEE
Confidence 86522111111 1111111 258889999999995 6789999999999999
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-29 Score=294.84 Aligned_cols=143 Identities=15% Similarity=0.094 Sum_probs=122.0
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCCe
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~~ 249 (1678)
||+|+||.||+++++ .++..+|+|.+.............. ..|+++++.++||||+++++++.++..
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~-------~~E~~il~~l~hp~i~~~~~~~~~~~~ 67 (277)
T cd05607 1 LGKGGFGEVCAVQVK------NTGKMYACKKLDKKRLKKKSGEKMA-------LLEKEILEKVNSPFIVNLAYAFESKTH 67 (277)
T ss_pred CCCCCceEEEEEEEc------cCCcEEEEEEEcHHHhhcchhhHHH-------HHHHHHHHhcCCCcEEEEEEEEecCCe
Confidence 799999999999965 4688999999865332221112222 279999999999999999999999999
Q ss_pred EEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 250 ~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
+|+||||++| +|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 68 ~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~~ 144 (277)
T cd05607 68 LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAVE 144 (277)
T ss_pred EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC--CEEEeeceeeee
Confidence 9999999985 999888754555688999999999999999999999999999999999999998 899999999874
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=301.57 Aligned_cols=145 Identities=18% Similarity=0.217 Sum_probs=125.5
Q ss_pred Eeeeeeee--CcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 166 PIAFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 166 ~~~~IG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
++++||+| +|++||++.++ .++..||+|.+...... ....++++ +|+.+++.++||||++++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~~-------~e~~~l~~l~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYK------PTGEYVTVRRINLEACT-NEMVTFLQ-------GELHVSKLFNHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEeec------ccCcEEEEEEechhhcc-HHHHHHHH-------HHHHHHHhcCCCCeeeEEEE
Confidence 56889999 78899999965 57899999998764333 23334443 89999999999999999999
Q ss_pred EEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 244 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
+..++..|+||||++ |+|.+++.......+++..++.++.|++.||+|||++||+||||||+|||++.++ .+|++||
T Consensus 68 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~--~~~l~~~ 145 (327)
T cd08227 68 FIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGL 145 (327)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC--cEEEccc
Confidence 999999999999999 5999999754445689999999999999999999999999999999999999998 8999999
Q ss_pred CCcc
Q 000316 323 PLVG 326 (1678)
Q Consensus 323 GlA~ 326 (1678)
|.+.
T Consensus 146 ~~~~ 149 (327)
T cd08227 146 RSNL 149 (327)
T ss_pred chhh
Confidence 8654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=287.90 Aligned_cols=277 Identities=16% Similarity=0.252 Sum_probs=229.9
Q ss_pred ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCC
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1403 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg 1403 (1678)
-...|..|.|.|+|+.|++|+. .|.+.+|+..+-..-..+++|..+|.++.|++++..+.|+ ||.||+|+....
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~----SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn 170 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQ----SGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN 170 (464)
T ss_pred cccceeeEEEcCCCceeEeecc----cccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh
Confidence 3458999999999999999997 7999999986655555667999999999999999999766 799999998754
Q ss_pred ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECC
Q 000316 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1678)
Q Consensus 1404 ~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~ 1483 (1678)
.. +.+..| +...|++++++|+...++++|.||+|+|||..
T Consensus 171 nV-k~~~ah---------------------------------------h~eaIRdlafSpnDskF~t~SdDg~ikiWdf~ 210 (464)
T KOG0284|consen 171 NV-KIIQAH---------------------------------------HAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFR 210 (464)
T ss_pred hh-HHhhHh---------------------------------------hhhhhheeccCCCCceeEEecCCCeEEEEecc
Confidence 32 222221 11236778888889999999999999999999
Q ss_pred CCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-c
Q 000316 1484 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-A 1562 (1678)
Q Consensus 1484 tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-s 1562 (1678)
..+.-..+.+|. -.|.+++|.+.. .+||+|+.|..|++||.++|+++.++.+|+..|.++. .
T Consensus 211 ~~kee~vL~GHg------wdVksvdWHP~k-----------gLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~ 273 (464)
T KOG0284|consen 211 MPKEERVLRGHG------WDVKSVDWHPTK-----------GLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFN 273 (464)
T ss_pred CCchhheeccCC------CCcceeccCCcc-----------ceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEc
Confidence 888777777654 448889887544 5899999999999999999999999999999999999 9
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEec-CCEEEEEeCCC-eEEEecCCCCCCCCcceeccc
Q 000316 1563 PEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW-GQDVISISNNK-IGLSSLSKSADEDGQHRLVPQ 1638 (1678)
Q Consensus 1563 pdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpd-g~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~ 1638 (1678)
+++++|+|+|.|.+++++|+++. +.+.++++|..-|++ ++|- ..++++|+.|+ |..|.+... .
T Consensus 274 ~n~N~Llt~skD~~~kv~DiR~m--kEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~------~----- 340 (464)
T KOG0284|consen 274 PNGNWLLTGSKDQSCKVFDIRTM--KELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLE------E----- 340 (464)
T ss_pred CCCCeeEEccCCceEEEEehhHh--HHHHHhhcchhhheeeccccccccceeeccCCCceEEEecccc------c-----
Confidence 99999999999999999999966 667899999999996 6776 45677889999 999997411 0
Q ss_pred eeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1639 KLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1639 kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+-. -...|...|++++|+|-|.+|++|+.|.++|+|.
T Consensus 341 p~~~--i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 341 PLGE--IPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred cccC--CCcccccceeeeeccccceeEeecCCCcceeeec
Confidence 1111 1125889999999999999999999999999993
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-31 Score=334.81 Aligned_cols=177 Identities=19% Similarity=0.183 Sum_probs=146.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.-+++...+||.|.||.||-|.+. .+|...|+|-++............. +|..+|..++|||+|++
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~------~tGellAvKEI~iq~~~~k~~~~i~--------eEm~vlE~lnHpNlV~Y 1299 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNL------DTGELLAVKEIKIQDSDHKTFKLIA--------EEMKVLEGLNHPNLVRY 1299 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecC------CccchhhhhhhhcCccccccCcchH--------HHHHHHHhccCcccccc
Confidence 347889999999999999999853 7899999999876544322222222 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
||+-.+.+.++|.||||. |+|.+++. .++..++...+.|..|++.|+.|||++|||||||||+||+++.+| .+|+
T Consensus 1300 yGVEvHRekv~IFMEyC~~GsLa~ll~--~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g--~iK~ 1375 (1509)
T KOG4645|consen 1300 YGVEVHREKVYIFMEYCEGGSLASLLE--HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG--LIKY 1375 (1509)
T ss_pred CceeecHHHHHHHHHHhccCcHHHHHH--hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC--cEEe
Confidence 999999999999999999 59999998 566678888899999999999999999999999999999999999 9999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 362 (1678)
.|||.|+......+... +. .....||+.|||||++.
T Consensus 1376 ~DFGsa~ki~~~~~~~~------~e-l~~~~GT~~YMAPEvit 1411 (1509)
T KOG4645|consen 1376 GDFGSAVKIKNNAQTMP------GE-LQSMMGTPMYMAPEVIT 1411 (1509)
T ss_pred ecccceeEecCchhcCC------HH-HHhhcCCchhcCchhhc
Confidence 99999997653211111 11 12456899999999864
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=293.09 Aligned_cols=286 Identities=17% Similarity=0.266 Sum_probs=235.8
Q ss_pred CceeEEeccccccEEEEEEec-CCCEEEEEecCCCCCCeEEEEeCCC-CeEEEEEecCCccEEEEeecCCCCcE--EeCC
Q 000316 1317 ASILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTR-INCVSGYYGHEEVVNDICVLSSSGRI--ASCD 1392 (1678)
Q Consensus 1317 ~~~l~tl~gH~~~V~svafsp-dg~~LaSgS~d~~~DgtVrlWDl~t-g~~l~~l~gH~~~V~sV~fs~~~~~l--aS~D 1392 (1678)
...+.++.||+..|.++.|.| .+.+|+|||. |+.|+||++-+ ++|+++|.||..+|.+++|+.++..+ +|.|
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gm----D~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD 279 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGM----DGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFD 279 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCC----CceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecc
Confidence 456889999999999999999 8899999998 99999999866 99999999999999999999999888 5669
Q ss_pred CcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCC-CEEEEE
Q 000316 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVG 1471 (1678)
Q Consensus 1393 gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g-~~Lasg 1471 (1678)
++|++||++||+++..+... ...+|+.++|++ +.+++|
T Consensus 280 ~~lKlwDtETG~~~~~f~~~-----------------------------------------~~~~cvkf~pd~~n~fl~G 318 (503)
T KOG0282|consen 280 RFLKLWDTETGQVLSRFHLD-----------------------------------------KVPTCVKFHPDNQNIFLVG 318 (503)
T ss_pred eeeeeeccccceEEEEEecC-----------------------------------------CCceeeecCCCCCcEEEEe
Confidence 99999999999999888642 124666777777 889999
Q ss_pred ECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe
Q 000316 1472 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1678)
Q Consensus 1472 s~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~ 1551 (1678)
+.|+.|+.||+|+++.++.+..|. +.|..+.|. ++|..+++.++|++++||+.+.+-.++...
T Consensus 319 ~sd~ki~~wDiRs~kvvqeYd~hL------g~i~~i~F~-----------~~g~rFissSDdks~riWe~~~~v~ik~i~ 381 (503)
T KOG0282|consen 319 GSDKKIRQWDIRSGKVVQEYDRHL------GAILDITFV-----------DEGRRFISSSDDKSVRIWENRIPVPIKNIA 381 (503)
T ss_pred cCCCcEEEEeccchHHHHHHHhhh------hheeeeEEc-----------cCCceEeeeccCccEEEEEcCCCccchhhc
Confidence 999999999999999998887544 346777764 556799999999999999999987665543
Q ss_pred -ccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCC-CCCeEeecCCCCEE----EEEecCCEEEEEeCCC-eEEEec
Q 000316 1552 -AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP-SQPTVFKGHTNGIS----GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1552 -gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~-~~~~~l~gH~~~V~----afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
.+.....+|. +|++.+++.-|.|+.|.++.+..... .....++||..+-. .|||||++|++|+.|| +.+||.
T Consensus 382 ~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdw 461 (503)
T KOG0282|consen 382 DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDW 461 (503)
T ss_pred chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeec
Confidence 2233455777 99999999999999999999765321 22236788876433 4999999999999999 999996
Q ss_pred CCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCC-CEEEEEeCCCcEEEcC
Q 000316 1624 SKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS-RLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1624 ~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~-~lLatgs~DG~IrIwd 1678 (1678)
. ..+++... ..|.+++..+.|+|.. ..+||||+||.|++|+
T Consensus 462 k------------t~kl~~~l--kah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 462 K------------TTKLVSKL--KAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred h------------hhhhhhcc--ccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 4 12333322 2488999999999976 5799999999999997
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=260.99 Aligned_cols=275 Identities=18% Similarity=0.251 Sum_probs=229.0
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~D 1352 (1678)
..++.+|++.|.+ |+.||.+ ..+++.|+++++||.. |.+++++.||...|..++.+.|...+++||. |
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY-----~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~Gg----D 80 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNY-----CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGG----D 80 (307)
T ss_pred ceeecccccceEEEEEccCCCE-----EEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCC----C
Confidence 4567788999987 8999987 9999999999999977 8999999999999999999999999999997 9
Q ss_pred CeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCC--ceeEEecccCccccccCCCCCCccc
Q 000316 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISK 1428 (1678)
Q Consensus 1353 gtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg--~~~~~l~~~~~~~~~~~s~s~~~~~ 1428 (1678)
+.|.+||++||+..+.+.||.+.|+.|+|+.+...++|+ |.++++||.++. ++++.+...
T Consensus 81 k~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea---------------- 144 (307)
T KOG0316|consen 81 KAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEA---------------- 144 (307)
T ss_pred ceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhh----------------
Confidence 999999999999999999999999999999888888665 999999999865 345544421
Q ss_pred cccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEE
Q 000316 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1678)
Q Consensus 1429 ~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva 1508 (1678)
...|.++... +..+++|+.||++|.||++.|+....+- ...|+|++
T Consensus 145 --------------~D~V~Si~v~------------~heIvaGS~DGtvRtydiR~G~l~sDy~--------g~pit~vs 190 (307)
T KOG0316|consen 145 --------------KDGVSSIDVA------------EHEIVAGSVDGTVRTYDIRKGTLSSDYF--------GHPITSVS 190 (307)
T ss_pred --------------cCceeEEEec------------ccEEEeeccCCcEEEEEeecceeehhhc--------CCcceeEE
Confidence 2223333333 4589999999999999999998765443 44589998
Q ss_pred eeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE---cCCCCEEEEEeCCCcEEEEEcCCC
Q 000316 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRRN 1585 (1678)
Q Consensus 1509 ~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~~ 1585 (1678)
|+ ++|++..+|+-|+++++.|-.||++++.++||...-..+. ......+++||.||.|.+||+.+.
T Consensus 191 ~s-----------~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~ 259 (307)
T KOG0316|consen 191 FS-----------KDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDE 259 (307)
T ss_pred ec-----------CCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccc
Confidence 86 5668999999999999999999999999999987766655 445579999999999999999987
Q ss_pred CCCCCeEeecCCCC-EEE--EEecCCEEEEEeCCCeEEEe
Q 000316 1586 WPSQPTVFKGHTNG-ISG--FSVWGQDVISISNNKIGLSS 1622 (1678)
Q Consensus 1586 ~~~~~~~l~gH~~~-V~a--fSpdg~~LaSgs~D~I~vwd 1622 (1678)
..+..+..|... |.+ +.|.-..+++++..++..|-
T Consensus 260 --~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~~~~~~ 297 (307)
T KOG0316|consen 260 --TQISKLSVVSTVIVTDLSCHPTMDDFITATGHGDLFWY 297 (307)
T ss_pred --eeeeeeccCCceeEEeeecccCccceeEecCCceecee
Confidence 556677766666 444 66767778888777777775
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-31 Score=283.97 Aligned_cols=149 Identities=23% Similarity=0.356 Sum_probs=127.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+.+.-+.||-|+||+||-+.+. ++|+.||+|++..-...-...+. .++|+++|..++|.||+..
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTDP------RdgrrvalkK~pnvfq~L~s~kr--------vFre~kmLcfFkHdNVLSa 117 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTDP------RSGKRVALKKMPNVFQNLASCKR--------VFREIKMLSSFRHDNVLSL 117 (449)
T ss_pred cccCCCCCcccccceeEEEeccCC------CCccchhHhhcchHHHHHHHHHH--------HHHHHHHHHhhccccHHHH
Confidence 446677889999999999988865 68999999997542111122222 3499999999999999999
Q ss_pred eeEEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 241 LGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 241 ~~~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
++..+-.. .+|+|.|.|..||..+|- ....++..+++-+++||++||.|||+.||+||||||.|+|++.+.
T Consensus 118 LDILQPph~dfFqEiYV~TELmQSDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC-- 193 (449)
T KOG0664|consen 118 LDILQPANPSFFQELYVLTELMQSDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC-- 193 (449)
T ss_pred HHhcCCCCchHHHHHHHHHHHHHhhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc--
Confidence 99887654 689999999999999998 566789999999999999999999999999999999999999999
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.+||||||+||.
T Consensus 194 vLKICDFGLARv 205 (449)
T KOG0664|consen 194 ILKICDFGLART 205 (449)
T ss_pred eEEecccccccc
Confidence 999999999984
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=291.27 Aligned_cols=148 Identities=24% Similarity=0.273 Sum_probs=130.3
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDR------ETGETVALKKVALRRLEGGIPNQAL--------REIKALQACQHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEEC------CCCceEEEEEEEcccccchhhHHHH--------HHHHHHHhCCCCCCcceee
Confidence 5899999999999999999964 4678999999876543333333444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
++..+...|+||||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~--~~~l~df 143 (286)
T cd07832 67 VFPHGSGFVLVMEYMPSDLSEVLRDE-ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADF 143 (286)
T ss_pred EEecCCeeEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC--cEEEeee
Confidence 99999999999999966999999743 36689999999999999999999999999999999999999988 8999999
Q ss_pred CCccc
Q 000316 323 PLVGF 327 (1678)
Q Consensus 323 GlA~~ 327 (1678)
|+++.
T Consensus 144 g~~~~ 148 (286)
T cd07832 144 GLARL 148 (286)
T ss_pred eeccc
Confidence 99874
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=286.19 Aligned_cols=148 Identities=16% Similarity=0.122 Sum_probs=128.3
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH---HHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES---KNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~---~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
+.|++.+.||+|+||.||+|.+. .++..+|+|.+.......... ..+. +|+++++.++||||+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~lk~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~ 67 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDV------DTGRELAVKQVPFDPDSPETKKEVNALE--------CEIQLLKNLQHERIV 67 (263)
T ss_pred CcccccceecCCCceEEEEEEEc------CCCcEEEEEEEeecccchhhHHHHHHHH--------HHHHHHHhCCCCCee
Confidence 46899999999999999999864 467899999987543322211 2222 899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++.+++.+++||||++| +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~~~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~--~~ 143 (263)
T cd06625 68 QYYGCLRDDETLSIFMEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG--NV 143 (263)
T ss_pred eeEEEEccCCeEEEEEEECCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 999999999999999999985 9999998 345688999999999999999999999999999999999999988 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 144 ~l~dfg~~~~ 153 (263)
T cd06625 144 KLGDFGASKR 153 (263)
T ss_pred EEeeccccee
Confidence 9999999863
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-30 Score=298.02 Aligned_cols=190 Identities=17% Similarity=0.219 Sum_probs=167.7
Q ss_pred eeE--eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 164 LFP--IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 164 y~~--~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
|++ .+.||.|.||+||-|+++ .+|+.||||+|.+.+...... ..++ +|+.||+.++||.||.+.
T Consensus 564 YQif~devLGSGQFG~VYgg~hR------ktGrdVAvKvIdKlrFp~kqe-sqlR-------~EVaILq~l~HPGiV~le 629 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHR------KTGRDVAVKVIDKLRFPTKQE-SQLR-------NEVAILQNLHHPGIVNLE 629 (888)
T ss_pred HHhhhHhhccCCcceeeecceec------ccCceeeeeeeecccCCCchH-HHHH-------HHHHHHHhcCCCCeeEEE
Confidence 544 689999999999999976 689999999999877766554 3444 999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-eeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-~~lKL~ 320 (1678)
..|++.+.+++|||.+.||+.+.|-.+..+++++...++++.||+.||.|||.++|+|+||||||||+.+... .++|||
T Consensus 630 ~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlC 709 (888)
T KOG4236|consen 630 CMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLC 709 (888)
T ss_pred EeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeec
Confidence 9999999999999999998888887778899999999999999999999999999999999999999986533 689999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+||..... .+....+|||.|.|||+++.+.|+...|+|+.|.|.
T Consensus 710 DFGfARiIgEk------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi 756 (888)
T KOG4236|consen 710 DFGFARIIGEK------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII 756 (888)
T ss_pred cccceeecchh------------hhhhhhcCCccccCHHHHhhccccccccceeeeEEE
Confidence 99999975521 123446799999999999999999999999999775
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=283.62 Aligned_cols=286 Identities=15% Similarity=0.216 Sum_probs=220.6
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC----CceeEEeccccccEEEEEEecCCCEEEEEecCC
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK----ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~----~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~ 1349 (1678)
.+.+..|++.||. ||++|++ |||||.|.+..+|++. -+..+++.||..+|.-+.||||.++|++||.
T Consensus 217 ~qil~~htdEVWfl~FS~nGky-----LAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~-- 289 (519)
T KOG0293|consen 217 WQILQDHTDEVWFLQFSHNGKY-----LASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGF-- 289 (519)
T ss_pred hhhHhhCCCcEEEEEEcCCCee-----EeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCc--
Confidence 4567889999996 9999998 9999999999999966 2368899999999999999999999999996
Q ss_pred CCCCeEEEEeCCCCeEEEEEe-cCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCcc--ccccCCCCC
Q 000316 1350 GFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMD--SLHGGSPSS 1424 (1678)
Q Consensus 1350 ~~DgtVrlWDl~tg~~l~~l~-gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~--~~~~~s~s~ 1424 (1678)
|..+++||+.+|.+...+. +|...+.+++|.|++..+ +|.|+++..||+. |..+....+-... ...+.++++
T Consensus 290 --~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dg 366 (519)
T KOG0293|consen 290 --DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDG 366 (519)
T ss_pred --hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCC
Confidence 8899999999999988875 567999999999999988 4559999999986 4433333322111 112223344
Q ss_pred CccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcc
Q 000316 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V 1504 (1678)
..+.+...+..+...+.....-..+.-....++++.++.+++++++.-.+..+++||+.....+..+.||.. ...+
T Consensus 367 k~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq----~~fi 442 (519)
T KOG0293|consen 367 KYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ----GHFI 442 (519)
T ss_pred cEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccc----cceE
Confidence 333222222211111110000011222334588899999999999999999999999998888988988864 3346
Q ss_pred eEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEc
Q 000316 1505 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDL 1582 (1678)
Q Consensus 1505 ~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl 1582 (1678)
-.-||.+. +..++|+||+|+.|+||+.++|+++..+.||...|++|+ .| +..++||||.||+||||..
T Consensus 443 IrSCFgg~----------~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~ 512 (519)
T KOG0293|consen 443 IRSCFGGG----------NDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGP 512 (519)
T ss_pred EEeccCCC----------CcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecC
Confidence 66677653 347999999999999999999999999999999999999 55 4469999999999999987
Q ss_pred CCC
Q 000316 1583 RRN 1585 (1678)
Q Consensus 1583 ~~~ 1585 (1678)
...
T Consensus 513 ~~~ 515 (519)
T KOG0293|consen 513 SDN 515 (519)
T ss_pred Ccc
Confidence 653
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-29 Score=292.53 Aligned_cols=149 Identities=19% Similarity=0.243 Sum_probs=130.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++++.||+|+||.||+|++. .++..+|||.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEEC------CCCCEEEEEEccccccccccchHHH--------HHHHHHHhcCCCCCcchhh
Confidence 4899999999999999999964 4678999999865432222222333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
++.+++..++||||++++|.+++...+...+++..++.++.|++.||+|||++|++||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~--~~~l~df 144 (284)
T cd07860 67 VIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADF 144 (284)
T ss_pred hcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEeec
Confidence 99999999999999998999999865667789999999999999999999999999999999999999999 8999999
Q ss_pred CCccc
Q 000316 323 PLVGF 327 (1678)
Q Consensus 323 GlA~~ 327 (1678)
|+++.
T Consensus 145 g~~~~ 149 (284)
T cd07860 145 GLARA 149 (284)
T ss_pred cchhh
Confidence 99863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7e-28 Score=277.24 Aligned_cols=276 Identities=18% Similarity=0.265 Sum_probs=234.9
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEE
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS 1367 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~ 1367 (1678)
+++.+|.. ||+|+.||.+++|+..|.++.+|..|.++|.++.|+.+|.+|+|||. |+++.+||..+|+..+
T Consensus 242 ~Wn~~G~~-----LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~v----D~ttilwd~~~g~~~q 312 (524)
T KOG0273|consen 242 DWNNDGTL-----LATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGV----DGTTILWDAHTGTVKQ 312 (524)
T ss_pred EecCCCCe-----EEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccC----CccEEEEeccCceEEE
Confidence 37788886 99999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred EEecCCccEEEEeecCCCCcEEe-CCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCe
Q 000316 1368 GYYGHEEVVNDICVLSSSGRIAS-CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1446 (1678)
Q Consensus 1368 ~l~gH~~~V~sV~fs~~~~~laS-~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1446 (1678)
.+.-|+.+-.+|.|-.++....+ .|+.|+++.+....++.++.+|. ++
T Consensus 313 ~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~------------------------------g~- 361 (524)
T KOG0273|consen 313 QFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHH------------------------------GE- 361 (524)
T ss_pred eeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeeccc------------------------------Cc-
Confidence 99999999888999655554433 39999999998888888887653 33
Q ss_pred EEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCE
Q 000316 1447 LSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1526 (1678)
Q Consensus 1447 ~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~ 1526 (1678)
|.++.|.|.|..|+++|.|+|++||....+.+.+.+.+| ...|..+.++|...... -...+..
T Consensus 362 ---------V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~H------skei~t~~wsp~g~v~~--n~~~~~~ 424 (524)
T KOG0273|consen 362 ---------VNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAH------SKEIYTIKWSPTGPVTS--NPNMNLM 424 (524)
T ss_pred ---------eEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhh------ccceeeEeecCCCCccC--CCcCCce
Confidence 455555566999999999999999999999888888865 44577788876554222 2245678
Q ss_pred EEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EE
Q 000316 1527 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GF 1603 (1678)
Q Consensus 1527 LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--af 1603 (1678)
+++++.|++|++||+..|.++.+|..|..+|.+|+ +|+|+++|||+.||.|.||+++++ +..+.+.+ ++.|. +|
T Consensus 425 l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~--~l~~s~~~-~~~Ifel~W 501 (524)
T KOG0273|consen 425 LASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG--KLVKSYQG-TGGIFELCW 501 (524)
T ss_pred EEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccch--heeEeecC-CCeEEEEEE
Confidence 99999999999999999999999999999999999 999999999999999999999998 44445554 55566 68
Q ss_pred EecCCEEEEEeCCC-eEEEec
Q 000316 1604 SVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1604 Spdg~~LaSgs~D~-I~vwdl 1623 (1678)
+.+|.+|..+-.|+ +.+-|+
T Consensus 502 n~~G~kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 502 NAAGDKLGACASDGSVCVLDL 522 (524)
T ss_pred cCCCCEEEEEecCCCceEEEe
Confidence 88899998887777 888775
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=291.44 Aligned_cols=149 Identities=19% Similarity=0.229 Sum_probs=128.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+|++.+.||+|+||.||+|.+. .++..||+|.+....... ......+ .+|+++++.++||||+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~~-------~~e~~~l~~~~h~~i~~~ 67 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDK------ETGRIVAIKKIKLGERKEAKDGINFTA-------LREIKLLQELKHPNIIGL 67 (298)
T ss_pred CceeeeeeeeccccEEEEEEEC------CCCcEEEEEEEeccccccccchhhHHH-------HHHHHHHhhcCCCCChhh
Confidence 5889999999999999999964 457899999997653331 1111222 289999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.+.+.+++||||+.++|.+++... ...+++..++.++.||++||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~L~~~i~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--~~~l~ 144 (298)
T cd07841 68 LDVFGHKSNINLVFEFMETDLEKVIKDK-SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--VLKLA 144 (298)
T ss_pred hheeecCCEEEEEEcccCCCHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC--CEEEc
Confidence 9999999999999999977999999832 23689999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 145 dfg~~~~ 151 (298)
T cd07841 145 DFGLARS 151 (298)
T ss_pred cceeeee
Confidence 9999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=291.97 Aligned_cols=148 Identities=22% Similarity=0.278 Sum_probs=129.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++ .++..||+|.+....... ....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSK------LTGQLVALKEIRLEHEEG-APFTAI--------REASLLKDLKHANIVTL 68 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEc------CCCcEEEEEEEecccccC-CchhHH--------HHHHHHhhCCCcceeeE
Confidence 578999999999999999999964 467889999987543221 112222 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.+++..|+||||++++|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~ 145 (291)
T cd07844 69 HDIIHTKKTLTLVFEYLDTDLKQYMDDC-GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC--CEEEC
Confidence 9999999999999999999999998743 34689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcc
Q 000316 321 DKPLVG 326 (1678)
Q Consensus 321 DFGlA~ 326 (1678)
|||+++
T Consensus 146 dfg~~~ 151 (291)
T cd07844 146 DFGLAR 151 (291)
T ss_pred cccccc
Confidence 999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=284.98 Aligned_cols=276 Identities=18% Similarity=0.307 Sum_probs=229.2
Q ss_pred eEeecCCCCCCCCCeEEEEeCCCCEEEEeCCC-ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe
Q 000316 1286 FWFPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1678)
Q Consensus 1286 V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~~-~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~ 1364 (1678)
+-.+.|+|+. |++||..|...||+... ..-..+.+|.++|+++.|+++|..++||+. ||.|++|+..-..
T Consensus 101 ~v~WtPeGRR-----Lltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~----gG~iKyWqpnmnn 171 (464)
T KOG0284|consen 101 VVRWTPEGRR-----LLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDK----GGMIKYWQPNMNN 171 (464)
T ss_pred eEEEcCCCce-----eEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCC----CceEEecccchhh
Confidence 3358899997 99999999999999752 233456789999999999999999999997 8999999987544
Q ss_pred EEEEEec-CCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCC
Q 000316 1365 CVSGYYG-HEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNT 1441 (1678)
Q Consensus 1365 ~l~~l~g-H~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~ 1441 (1678)
++.+++ |...|.+++|+|++..+ +|.||+|+|||....+....+.+|.-
T Consensus 172 -Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgw--------------------------- 223 (464)
T KOG0284|consen 172 -VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGW--------------------------- 223 (464)
T ss_pred -hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCC---------------------------
Confidence 334444 55999999999998888 45599999999998877777765531
Q ss_pred CCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCccc
Q 000316 1442 LSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV 1521 (1678)
Q Consensus 1442 ~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~ 1521 (1678)
.++|++|+|.-..+++|+.|+.|++||.++|+++.++.+| ...|..+.|.
T Consensus 224 -------------dVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~H------KntVl~~~f~----------- 273 (464)
T KOG0284|consen 224 -------------DVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGH------KNTVLAVKFN----------- 273 (464)
T ss_pred -------------CcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhc------cceEEEEEEc-----------
Confidence 1566777777889999999999999999999999998865 4457777775
Q ss_pred CCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCC
Q 000316 1522 ASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1599 (1678)
Q Consensus 1522 p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~ 1599 (1678)
+++++|+++|.|..++++|+|+.+.+.++++|+..|++++ +| +..+|.||+.||.|..|.+....+ ....-.+|...
T Consensus 274 ~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p-~~~i~~AHd~~ 352 (464)
T KOG0284|consen 274 PNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVGLEEP-LGEIPPAHDGE 352 (464)
T ss_pred CCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeeccCCCceEEEecccccc-ccCCCcccccc
Confidence 5668999999999999999999999999999999999999 65 556999999999999999985422 22234678999
Q ss_pred EEE--EEecCCEEEEEeCCC-eEEEecCCCCCC
Q 000316 1600 ISG--FSVWGQDVISISNNK-IGLSSLSKSADE 1629 (1678)
Q Consensus 1600 V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~ 1629 (1678)
|++ +.|-|..|++|+.|+ +++|.-.+.++.
T Consensus 353 iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d~ 385 (464)
T KOG0284|consen 353 IWSLAYHPLGHILATGSNDRTVRFWTRNRPGDK 385 (464)
T ss_pred eeeeeccccceeEeecCCCcceeeeccCCCCCc
Confidence 995 888899999999999 999997766543
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=290.29 Aligned_cols=150 Identities=15% Similarity=0.099 Sum_probs=129.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|+..+.||+|+||+||+|.+. .+++.+|+|.+.............. .+|+.+|+.++|+||+++++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~-------~~E~~il~~l~~~~i~~~~~ 67 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKRLEKKRIKKRKGESMA-------LNEKQILEKVNSQFVVNLAY 67 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEC------CCCcEEEEEEeehhhhhhhhHHHHH-------HHHHHHHHHcCCcCceeEEE
Confidence 3788899999999999999964 4688999999876433322222222 28999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++..++||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 68 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~--~~kl~D 145 (285)
T cd05632 68 AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG--HIRISD 145 (285)
T ss_pred EEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC--CEEEec
Confidence 99999999999999995 899888754455689999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 146 fg~~~~ 151 (285)
T cd05632 146 LGLAVK 151 (285)
T ss_pred CCccee
Confidence 999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=297.45 Aligned_cols=148 Identities=22% Similarity=0.363 Sum_probs=126.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. .++..||+|.+.... .......+. +|+.+++.++||||++
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~niv~ 67 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHK------PTGVKVAIKKISPFE-HQTFCQRTL--------REIKILRRFKHENIIG 67 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEc------CCCCeEEEEEecccc-cchhHHHHH--------HHHHHHHhCCCCCcCc
Confidence 3578999999999999999999964 567899999986421 112222333 8999999999999999
Q ss_pred eeeEEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 240 VLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 240 l~~~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+++++.... ..|+||||++++|.+++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 68 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~- 143 (336)
T cd07849 68 ILDIIRPPSFESFNDVYIVQELMETDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC- 143 (336)
T ss_pred hhheeecccccccceEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC-
Confidence 999876543 589999999999998886 45689999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 144 -~~kl~dfg~~~~ 155 (336)
T cd07849 144 -DLKICDFGLARI 155 (336)
T ss_pred -CEEECcccceee
Confidence 899999999874
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-27 Score=270.00 Aligned_cols=282 Identities=23% Similarity=0.411 Sum_probs=234.4
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEE
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHV 1397 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrI 1397 (1678)
++++++|.+.|.+++|+|+++++++|+. ||.|++||+.+++....+.+|...+.++.|++++..+ ++.||.|++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSG----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeec----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 4567899999999999999999999997 8999999999998888899999999999999988777 444999999
Q ss_pred EECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcE
Q 000316 1398 WNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSL 1477 (1678)
Q Consensus 1398 WD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtV 1477 (1678)
||+.+++.+..+..+. ..+.++.+++++..+++++.|+.|
T Consensus 78 ~~~~~~~~~~~~~~~~----------------------------------------~~i~~~~~~~~~~~~~~~~~~~~i 117 (289)
T cd00200 78 WDLETGECVRTLTGHT----------------------------------------SYVSSVAFSPDGRILSSSSRDKTI 117 (289)
T ss_pred EEcCcccceEEEeccC----------------------------------------CcEEEEEEcCCCCEEEEecCCCeE
Confidence 9999876665554321 125666667778888888889999
Q ss_pred EEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCe
Q 000316 1478 RFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1557 (1678)
Q Consensus 1478 rlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V 1557 (1678)
++||+++++....+..+ ...+.++++++ ++.++++++.||.|++||+++++.+..+..|...|
T Consensus 118 ~~~~~~~~~~~~~~~~~------~~~i~~~~~~~-----------~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i 180 (289)
T cd00200 118 KVWDVETGKCLTTLRGH------TDWVNSVAFSP-----------DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEV 180 (289)
T ss_pred EEEECCCcEEEEEeccC------CCcEEEEEEcC-----------cCCEEEEEcCCCcEEEEEccccccceeEecCcccc
Confidence 99999988888877743 44578888763 34688888889999999999999999999999999
Q ss_pred EEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcc
Q 000316 1558 TKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQH 1633 (1678)
Q Consensus 1558 ~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~ 1633 (1678)
.++. +++++.+++++.|+.|++||++++ .....+.+|...+.+ +++++.++++++.|+ |++|++.. +..
T Consensus 181 ~~~~~~~~~~~l~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~-----~~~ 253 (289)
T cd00200 181 NSVAFSPDGEKLLSSSSDGTIKLWDLSTG--KCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRT-----GEC 253 (289)
T ss_pred ceEEECCCcCEEEEecCCCcEEEEECCCC--ceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCC-----cee
Confidence 9999 899989999999999999999886 455567788888884 888888888888677 99999752 111
Q ss_pred eeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1634 RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1634 ~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
..... .|...|.+++|+|+++.|++++.||.|++|+
T Consensus 254 -------~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 254 -------VQTLS--GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred -------EEEcc--ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 11111 3677899999999999999999999999996
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-28 Score=281.10 Aligned_cols=149 Identities=24% Similarity=0.223 Sum_probs=128.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|++++.||+|+||.||++.+. .+++.+|+|.+............+. +|+++++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHR------TDGKQYVIKKLNLRNASRRERKAAE--------QEAQLLSQLKHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEc------CCCcEEEEEEEehhhcCHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 4899999999999999999965 4567899999875433333333333 8999999999999999999
Q ss_pred EEEeC-CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 243 LLKTS-GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 243 ~~~~~-~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
.+... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~--~~~l~ 144 (257)
T cd08223 67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN--IIKVG 144 (257)
T ss_pred eecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC--cEEEe
Confidence 88754 468999999985 999999854556689999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 145 df~~~~~ 151 (257)
T cd08223 145 DLGIARV 151 (257)
T ss_pred cccceEE
Confidence 9999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=280.08 Aligned_cols=274 Identities=16% Similarity=0.255 Sum_probs=223.0
Q ss_pred ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCC
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG 1403 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg 1403 (1678)
-..+|.|+.+.. ..++||.. |+||+|||..+..|+..+.||++.|.|+.|. ...+ +|.|.||++||+++|
T Consensus 196 ~skgVYClQYDD--~kiVSGlr----DnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 196 NSKGVYCLQYDD--EKIVSGLR----DNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred cCCceEEEEecc--hhhhcccc----cCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCC
Confidence 456899998854 47999998 9999999999999999999999999999983 3444 566999999999999
Q ss_pred ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECC
Q 000316 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1678)
Q Consensus 1404 ~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~ 1483 (1678)
+++.++-.|. ..|.-+.|+ +++++++|.|.++.+||+.
T Consensus 268 e~l~tlihHc------------------------------eaVLhlrf~------------ng~mvtcSkDrsiaVWdm~ 305 (499)
T KOG0281|consen 268 EPLNTLIHHC------------------------------EAVLHLRFS------------NGYMVTCSKDRSIAVWDMA 305 (499)
T ss_pred chhhHHhhhc------------------------------ceeEEEEEe------------CCEEEEecCCceeEEEecc
Confidence 9998887653 334555555 4599999999999999998
Q ss_pred CCee---eEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEE
Q 000316 1484 QGQK---LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1560 (1678)
Q Consensus 1484 tg~~---l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sv 1560 (1678)
.... .+.+. ||...|+.|.|+ ..+++++|.|.+|++|++.|++.++++.||...|-|+
T Consensus 306 sps~it~rrVLv------GHrAaVNvVdfd-------------~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIACl 366 (499)
T KOG0281|consen 306 SPTDITLRRVLV------GHRAAVNVVDFD-------------DKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACL 366 (499)
T ss_pred CchHHHHHHHHh------hhhhheeeeccc-------------cceEEEecCCceEEEEeccceeeehhhhcccccceeh
Confidence 6542 23344 455567777763 3699999999999999999999999999999998777
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccce
Q 000316 1561 AAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQK 1639 (1678)
Q Consensus 1561 aspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~k 1639 (1678)
. -.|++++|||.|.+|++||+..| .++..+.||.+-|.++..|.+.++||+.|| |+|||+....+. +.....
T Consensus 367 Q-Yr~rlvVSGSSDntIRlwdi~~G--~cLRvLeGHEeLvRciRFd~krIVSGaYDGkikvWdl~aaldp----ra~~~~ 439 (499)
T KOG0281|consen 367 Q-YRDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDP----RAPAST 439 (499)
T ss_pred h-ccCeEEEecCCCceEEEEecccc--HHHHHHhchHHhhhheeecCceeeeccccceEEEEecccccCC----cccccc
Confidence 5 36789999999999999999999 778899999999999999999999999999 999999743221 111111
Q ss_pred eeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1640 LYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1640 l~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+ -......|.+.|..+.| |...+++++.|.+|-|||
T Consensus 440 ~-Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 440 L-CLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWD 475 (499)
T ss_pred h-HHHhhhhccceeEEEee--cceEEEeccCCCeEEEEE
Confidence 1 11111257788999988 678899999999999996
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=291.53 Aligned_cols=151 Identities=25% Similarity=0.233 Sum_probs=130.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. .++..+|+|.++...........+. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~ni~~ 68 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDK------KTGEIVALKKLKMEKEKEGFPITSL--------REINILLKLQHPNIVT 68 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEEC------CCCcEEEEEEEeeccccccchhhHH--------HHHHHHHhcCCCCEEE
Confidence 4568999999999999999999964 4678899999975433322222223 8999999999999999
Q ss_pred eeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 240 VLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 240 l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
+++++... ...|+||||++++|.+++... ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (293)
T cd07843 69 VKEVVVGSNLDKIYMVMEYVEHDLKSLMETM-KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--IL 145 (293)
T ss_pred EEEEEEecCCCcEEEEehhcCcCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--cE
Confidence 99999887 899999999999999998743 34689999999999999999999999999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 146 ~l~d~g~~~~ 155 (293)
T cd07843 146 KICDFGLARE 155 (293)
T ss_pred EEeecCceee
Confidence 9999998873
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-28 Score=289.98 Aligned_cols=156 Identities=19% Similarity=0.202 Sum_probs=131.4
Q ss_pred ccccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCC
Q 000316 155 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH 234 (1678)
Q Consensus 155 ~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~H 234 (1678)
+......++|++.++||+|+||.||+|.+. .++..||+|.+.............. +|+.+++.++|
T Consensus 5 ~~~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h 70 (310)
T cd07865 5 FPFCDEVSKYEKLAKIGQGTFGEVFKARHK------KTKQIVALKKVLMENEKEGFPITAL--------REIKILQLLKH 70 (310)
T ss_pred CcccchhhheEEEEEeecCCCEEEEEEEEC------CCCcEEEEEEEeccCCcCCchhHHH--------HHHHHHHhCCC
Confidence 345556789999999999999999999964 4688999999865432222122222 89999999999
Q ss_pred CcccceeeEEEeCC--------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCC
Q 000316 235 PNVAPVLGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1678)
Q Consensus 235 pNIV~l~~~~~~~~--------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 306 (1678)
|||+++++++.... ..++||||++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|
T Consensus 71 ~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~n 149 (310)
T cd07865 71 ENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSN-KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAAN 149 (310)
T ss_pred CCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH
Confidence 99999999987654 4599999999999998873 33468999999999999999999999999999999999
Q ss_pred eEecCCCceeEEEEecCCccc
Q 000316 307 VLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 307 ILl~~~g~~~lKL~DFGlA~~ 327 (1678)
|+++.++ .+||+|||+++.
T Consensus 150 il~~~~~--~~kl~dfg~~~~ 168 (310)
T cd07865 150 ILITKDG--ILKLADFGLARA 168 (310)
T ss_pred EEECCCC--cEEECcCCCccc
Confidence 9999999 899999999974
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=287.41 Aligned_cols=148 Identities=20% Similarity=0.286 Sum_probs=126.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|+++ .++..+|+|.+..........+.+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNR------ETGQIVAIKKFVESEDDPVIKKIAL--------REIRMLKQLKHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEEC------CCCcEEEEEEEeecccCccccHHHH--------HHHHHHHhCCCCCEeeee
Confidence 47999999999999999999964 4678999999865432222222233 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++..+...++||||+++ .|..++. ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~~l~ 142 (286)
T cd07847 67 EVFRRKRKLHLVFEYCDHTVLNELEK--NPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG--QIKLC 142 (286)
T ss_pred eEEeeCCEEEEEEeccCccHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC--cEEEC
Confidence 999999999999999997 5555554 344689999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 143 dfg~~~~ 149 (286)
T cd07847 143 DFGFARI 149 (286)
T ss_pred cccccee
Confidence 9999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=292.45 Aligned_cols=152 Identities=19% Similarity=0.182 Sum_probs=127.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.++||+|+||.||+|.+.. ...+..||+|.+...........+.. .+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~~-------~~e~~~l~~l~h~~i~~~~~ 69 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKN----GKDGKEYAIKKFKGDKEQYTGISQSA-------CREIALLRELKHENVVSLVE 69 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecC----CCCCCeEEEEEeccccccccCccHHH-------HHHHHHHHhcCCCCccceEE
Confidence 58999999999999999999641 02678999999986432211111111 28999999999999999999
Q ss_pred EEEeC--CeEEEeccCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC----CC
Q 000316 243 LLKTS--GLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD----SC 313 (1678)
Q Consensus 243 ~~~~~--~~~~lVmEy~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~----~g 313 (1678)
++.+. ..+++||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~ 149 (316)
T cd07842 70 VFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERG 149 (316)
T ss_pred EEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccc
Confidence 99988 7899999999999988886422 236899999999999999999999999999999999999999 77
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 150 --~~kl~Dfg~~~~ 161 (316)
T cd07842 150 --VVKIGDLGLARL 161 (316)
T ss_pred --eEEECCCccccc
Confidence 899999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=301.58 Aligned_cols=213 Identities=18% Similarity=0.189 Sum_probs=175.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceE-EEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVL-GSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~-vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..+....+.||+|+||+||++.. .|.. ||+|++...........+|. +|+.+|.+++|||||+
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~--------~g~~~vavK~~~~~~~~~~~~~~f~--------~E~~il~~l~HpNIV~ 103 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKW--------RGTDVVAVKIISDPDFDDESRKAFR--------REASLLSRLRHPNIVQ 103 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEe--------CCceeEEEEEecchhcChHHHHHHH--------HHHHHHHhCCCCCeee
Confidence 34556677799999999999884 4555 99999987655555444555 9999999999999999
Q ss_pred eeeEEEeCC-eEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ceecCCCCCCeEecCCCcee
Q 000316 240 VLGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG-IAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~~-~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g-IiHRDLKP~NILl~~~g~~~ 316 (1678)
++|++.... .++|||||++ |+|.+++.......++...+..++.||++||.|||+++ ||||||||+|||++.++ .+
T Consensus 104 f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~ 182 (362)
T KOG0192|consen 104 FYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KT 182 (362)
T ss_pred EEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CE
Confidence 999999887 7999999999 69999998544678999999999999999999999999 99999999999999985 38
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc--cccccccccccccCccchhhhHhhhccccCC-
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR- 393 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR- 393 (1678)
+||||||+++...... . ..+...||+.|||||++. ...|+.++|+|++| +.....++|+
T Consensus 183 ~KI~DFGlsr~~~~~~------~-----~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFg-------IvlWEl~t~~~ 244 (362)
T KOG0192|consen 183 LKIADFGLSREKVISK------T-----SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFG-------IVLWELLTGEI 244 (362)
T ss_pred EEECCCccceeecccc------c-----cccCCCCCccccChhhhcCCCCcCCccchhhhHH-------HHHHHHHHCCC
Confidence 9999999998644211 0 112246899999999999 67999999999999 6667777775
Q ss_pred CCCCCcCCcccceEe
Q 000316 394 RWGDYTFHMVMPWVI 408 (1678)
Q Consensus 394 s~~dl~q~pv~pwv~ 408 (1678)
+|.++....+.-.|.
T Consensus 245 Pf~~~~~~~~~~~v~ 259 (362)
T KOG0192|consen 245 PFEDLAPVQVASAVV 259 (362)
T ss_pred CCCCCCHHHHHHHHH
Confidence 677766655555554
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=304.98 Aligned_cols=211 Identities=15% Similarity=0.168 Sum_probs=165.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||+||+|+++ .++..||+|++.+...........++ +|+.++..++||||++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~~~~~~iv~~~ 67 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKK------DTGHVYAMKILRKADMLEKEQVGHIR-------AERDILVEADSLWVVKMF 67 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 47999999999999999999965 46789999999764332222223332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+.+...+|+|||||+| +|.+++. ..+.+++..++.++.|++.||+|||++||+||||||+|||++.++ ++||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~--~vkL~ 143 (363)
T cd05628 68 YSFQDKLNLYLIMEFLPGGDMMTLLM--KKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVKLS 143 (363)
T ss_pred EEEecCCeEEEEEcCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--CEEEe
Confidence 999999999999999985 9999998 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccc--------cC--------C---C-----CcceeecccccCcccccccccccccccccccccccC
Q 000316 321 DKPLVGFNSIADWCTI--------PT--------S---P-----MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~--------~~--------~---~-----~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
|||+++.......... .. . . ..........||+.|+|||++.+..|+.++|+|+.|
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG 223 (363)
T cd05628 144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (363)
T ss_pred eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence 9999985432110000 00 0 0 000001123589999999999999999999999999
Q ss_pred ccchhhhHhhhccc
Q 000316 377 ELSNFEYLLFLNKL 390 (1678)
Q Consensus 377 ~isnfeyL~~ln~~ 390 (1678)
++. |++++...++
T Consensus 224 vil-~ell~G~~Pf 236 (363)
T cd05628 224 VIM-YEMLIGYPPF 236 (363)
T ss_pred HHH-HHHHhCCCCC
Confidence 664 4444433333
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=292.87 Aligned_cols=151 Identities=21% Similarity=0.269 Sum_probs=128.1
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.++||+|+||.||+|.++ .++..+|+|.+............. .+|+++++.++||||++
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~~i~~ 71 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQI------KTGRVVALKKILMHNEKDGFPITA--------LREIKILKKLKHPNVVP 71 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCcchhH--------HHHHHHHHhcCCCCccc
Confidence 3789999999999999999999964 467889999986543222211222 28999999999999999
Q ss_pred eeeEEEeCC--------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 240 VLGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 240 l~~~~~~~~--------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
+++++.... .+++||||++++|...+.. ....+++..++.++.||++||.|||++||+||||||+||++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~ 150 (311)
T cd07866 72 LIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN 150 (311)
T ss_pred hhhheecccccccccCceEEEEEecCCcCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECC
Confidence 999875433 5799999999999888873 3456899999999999999999999999999999999999999
Q ss_pred CCceeEEEEecCCccc
Q 000316 312 SCWSWLYICDKPLVGF 327 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~ 327 (1678)
++ .+||+|||+++.
T Consensus 151 ~~--~~~l~dfg~~~~ 164 (311)
T cd07866 151 QG--ILKIADFGLARP 164 (311)
T ss_pred CC--CEEECcCccchh
Confidence 99 899999999974
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=254.08 Aligned_cols=275 Identities=26% Similarity=0.359 Sum_probs=228.0
Q ss_pred CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCc
Q 000316 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1394 (1678)
Q Consensus 1317 ~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--Dgt 1394 (1678)
...++.+.+|.++|+.+.|+-||++.++||. |++||+|+...|.+++++.||...|.+++.+.++..++|| |+.
T Consensus 7 tkr~~~l~~~qgaV~avryN~dGnY~ltcGs----drtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 7 TKRLSILDCAQGAVRAVRYNVDGNYCLTCGS----DRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred chhceeecccccceEEEEEccCCCEEEEcCC----CceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce
Confidence 4467889999999999999999999999998 9999999999999999999999999999999999999777 999
Q ss_pred EEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECC
Q 000316 1395 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1474 (1678)
Q Consensus 1395 VrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~D 1474 (1678)
|.+||++||+.++.|.+|. +.|+.+.| +.+...+++|+-|
T Consensus 83 v~vwDV~TGkv~Rr~rgH~------------------------------aqVNtV~f----------NeesSVv~SgsfD 122 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGHL------------------------------AQVNTVRF----------NEESSVVASGSFD 122 (307)
T ss_pred EEEEEcccCeeeeeccccc------------------------------ceeeEEEe----------cCcceEEEecccc
Confidence 9999999999999888763 33444444 4558899999999
Q ss_pred CcEEEEECCCC--eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 000316 1475 GSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1678)
Q Consensus 1475 gtVrlWDl~tg--~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~g 1552 (1678)
.++++||.++. ++++.+... ...|.+|... +..+++||.||++|.||+|.|+.....-+
T Consensus 123 ~s~r~wDCRS~s~ePiQildea------~D~V~Si~v~-------------~heIvaGS~DGtvRtydiR~G~l~sDy~g 183 (307)
T KOG0316|consen 123 SSVRLWDCRSRSFEPIQILDEA------KDGVSSIDVA-------------EHEIVAGSVDGTVRTYDIRKGTLSSDYFG 183 (307)
T ss_pred ceeEEEEcccCCCCccchhhhh------cCceeEEEec-------------ccEEEeeccCCcEEEEEeecceeehhhcC
Confidence 99999999875 566666543 3346666643 36799999999999999999998887775
Q ss_pred cCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE----EEEecCCEEEEEeCCC-eEEEecCCC
Q 000316 1553 HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS----GFSVWGQDVISISNNK-IGLSSLSKS 1626 (1678)
Q Consensus 1553 H~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~----afSpdg~~LaSgs~D~-I~vwdl~~~ 1626 (1678)
| +|+++. +++++..+.++.|+++++-|-.++ +.+..++||...-. +++.....+++||.|| +.+||+...
T Consensus 184 ~--pit~vs~s~d~nc~La~~l~stlrLlDk~tG--klL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~ 259 (307)
T KOG0316|consen 184 H--PITSVSFSKDGNCSLASSLDSTLRLLDKETG--KLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDE 259 (307)
T ss_pred C--cceeEEecCCCCEEEEeeccceeeecccchh--HHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccc
Confidence 4 799999 999999999999999999999999 67788999988655 4888889999999999 999998622
Q ss_pred CCCCCcceeccceeeeeecCCCccCc-EEEEEEecCCCEEEEEeCCC
Q 000316 1627 ADEDGQHRLVPQKLYMVDNGAKNLSV-LSSISILPFSRLFLVGTEDG 1672 (1678)
Q Consensus 1627 ~~~~g~~~~~~~kl~~~~~g~~h~~~-I~svafsPd~~lLatgs~DG 1672 (1678)
. . ..++. -+..+ |.+++++|....|.++..-+
T Consensus 260 ~-----~---~sk~~------~~~~v~v~dl~~hp~~~~f~~A~~~~ 292 (307)
T KOG0316|consen 260 T-----Q---ISKLS------VVSTVIVTDLSCHPTMDDFITATGHG 292 (307)
T ss_pred e-----e---eeeec------cCCceeEEeeecccCccceeEecCCc
Confidence 1 1 11111 13344 89999999988887776443
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=305.75 Aligned_cols=206 Identities=16% Similarity=0.186 Sum_probs=161.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|+++++||+|+||.||+|++. .++..||||++.+.........+.++ +|+++|+.++|||||+++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~hp~iv~~~ 67 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKK------DTGKIYAMKTLLKSEMFKKDQLAHVK-------AERDVLAESDSPWVVSLY 67 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhHHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 47999999999999999999965 57889999998654322222222222 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++|.+++.+|+||||++ |+|.+++. ....+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~--~~kl~ 143 (377)
T cd05629 68 YSFQDAQYLYLIMEFLPGGDLMTMLI--KYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIKLS 143 (377)
T ss_pred EEEEcCCeeEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEEe
Confidence 99999999999999998 59999997 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcc------cc--cCCCC----------------------------cceeecccccCcccccccccccc
Q 000316 321 DKPLVGFNSIADWC------TI--PTSPM----------------------------IGCCIEGCSSQGLYADLKLSQSM 364 (1678)
Q Consensus 321 DFGlA~~~~~~~~~------~~--~~~~~----------------------------~~~~~~~~~gt~~Y~APE~~~~~ 364 (1678)
|||+++........ .. ..... .........||+.|+|||++.+.
T Consensus 144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 223 (377)
T cd05629 144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ 223 (377)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence 99999732210000 00 00000 00000123589999999999999
Q ss_pred cccccccccccCccchhhhHh
Q 000316 365 DWHSQFNRWWRGELSNFEYLL 385 (1678)
Q Consensus 365 ~y~~~~d~W~~G~isnfeyL~ 385 (1678)
.|+.++|+|+.|++. |+.++
T Consensus 224 ~~~~~~DiwSlGvil-~ellt 243 (377)
T cd05629 224 GYGQECDWWSLGAIM-FECLI 243 (377)
T ss_pred CCCCceeeEecchhh-hhhhc
Confidence 999999999999765 44433
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=298.86 Aligned_cols=149 Identities=23% Similarity=0.339 Sum_probs=128.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++ .++..||+|.+............+. +|+.+|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDT------RSGKKVAIKKIPHAFDVPTLAKRTL--------RELKILRHFKHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEc------CCCCEEEEEEeccccccccchHHHH--------HHHHHHHhcCCCCccCH
Confidence 478999999999999999999965 5688999999875432222222333 89999999999999999
Q ss_pred eeEEEe----CCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 241 LGLLKT----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 241 ~~~~~~----~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++|.. ...+|+||||+.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~ 145 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLMESDLHHIIH--SDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--E 145 (334)
T ss_pred HHhccccCCCCceEEEEEehhhhhHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 998864 34789999999999999987 455689999999999999999999999999999999999999999 8
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 146 ~kl~dfg~~~~ 156 (334)
T cd07855 146 LRIGDFGMARG 156 (334)
T ss_pred EEeccccccee
Confidence 99999999874
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=297.79 Aligned_cols=281 Identities=23% Similarity=0.391 Sum_probs=239.0
Q ss_pred eEEeccc-cccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe--EEEEEecCCccEEEEeecCCCCcEEe--CCCc
Q 000316 1320 LSSIRAH-HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRIAS--CDGT 1394 (1678)
Q Consensus 1320 l~tl~gH-~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~--~l~~l~gH~~~V~sV~fs~~~~~laS--~Dgt 1394 (1678)
...+.+| ..+|.++.|+++|+.+++++. |+++++|++.+++ ....+.+|...|++++|+|++..+++ .|++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~----~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~t 226 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASS----DGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKT 226 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccC----CCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCce
Confidence 5556555 889999999999999999987 8999999998887 77788999999999999999998844 4999
Q ss_pred EEEEEC-CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEEC
Q 000316 1395 LHVWNS-QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1473 (1678)
Q Consensus 1395 VrIWD~-~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~ 1473 (1678)
|||||+ ..+.+++++.+|.. .+++++|+|+|+.+++|+.
T Consensus 227 iriwd~~~~~~~~~~l~gH~~----------------------------------------~v~~~~f~p~g~~i~Sgs~ 266 (456)
T KOG0266|consen 227 LRIWDLKDDGRNLKTLKGHST----------------------------------------YVTSVAFSPDGNLLVSGSD 266 (456)
T ss_pred EEEeeccCCCeEEEEecCCCC----------------------------------------ceEEEEecCCCCEEEEecC
Confidence 999999 55688888887642 2567777778999999999
Q ss_pred CCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc--EEEEEe
Q 000316 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWR 1551 (1678)
Q Consensus 1474 DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~--~i~~l~ 1551 (1678)
|++|++||+++++++..+.+|. ..|.+++|. ++|+.+++++.||.|++||+.++. ++..+.
T Consensus 267 D~tvriWd~~~~~~~~~l~~hs------~~is~~~f~-----------~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 329 (456)
T KOG0266|consen 267 DGTVRIWDVRTGECVRKLKGHS------DGISGLAFS-----------PDGNLLVSASYDGTIRVWDLETGSKLCLKLLS 329 (456)
T ss_pred CCcEEEEeccCCeEEEeeeccC------CceEEEEEC-----------CCCCEEEEcCCCccEEEEECCCCceeeeeccc
Confidence 9999999999999999999764 457888875 566899999999999999999999 678888
Q ss_pred ccCCC--eEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE-----EEecCCEEEEEeCCC-eEEEe
Q 000316 1552 AHDGY--VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG-----FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1552 gH~~~--V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a-----fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
++... ++++. +|++.++++++.|+++++||++.+ ..+..+.+|...+.+ .++.++++++|+.|+ |.+|+
T Consensus 330 ~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~ 407 (456)
T KOG0266|consen 330 GAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG--KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWD 407 (456)
T ss_pred CCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC--cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEe
Confidence 87766 88888 999999999999999999999988 667788999886543 467899999999999 99999
Q ss_pred cCCCCCCCCcceeccceeeeeecCCCc-cCcEEEEEEecCCCEEEEEe--CCCcEEEc
Q 000316 1623 LSKSADEDGQHRLVPQKLYMVDNGAKN-LSVLSSISILPFSRLFLVGT--EDGYLRLC 1677 (1678)
Q Consensus 1623 l~~~~~~~g~~~~~~~kl~~~~~g~~h-~~~I~svafsPd~~lLatgs--~DG~IrIw 1677 (1678)
++. +.. ... . .+| ...+..++++|...++++++ .|+.|++|
T Consensus 408 ~~s-----~~~---~~~----l--~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w 451 (456)
T KOG0266|consen 408 SSS-----GGI---LQR----L--EGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLW 451 (456)
T ss_pred CCc-----cch---hhh----h--cCCCCCceeccccCCCcCeeeecCcCCCceEEEe
Confidence 862 111 111 1 246 78899999999999999999 69999999
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-26 Score=268.94 Aligned_cols=330 Identities=15% Similarity=0.195 Sum_probs=256.0
Q ss_pred cccccCCCCceE--eecCCCCCCCCCeEEEEeCCCCEEEEeCCCc---eeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1276 TSNLMKCEPWFW--FPTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1276 ~~~l~gH~~~V~--~fSpdg~~~~~~~LasgS~D~~v~lWd~~~~---~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
...+..|+..+. .+||.|.| +|+|...|+||+||..++ +..+++.-.++|..++|+.|+++|+..|. |
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~y-----iASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGE--G 124 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFY-----IASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGE--G 124 (603)
T ss_pred eeeeccccceeEEEEeCCCceE-----EeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEec--C
Confidence 445666776666 39999998 999999999999998752 44567778899999999999999999986 4
Q ss_pred CCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCc-E--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR-I--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~-l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
.++..+++-..+|..+..+.||...|++++|-|...+ + +|.|++|-+|+-.--+-..++..|+
T Consensus 125 rerfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~Hs-------------- 190 (603)
T KOG0318|consen 125 RERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHS-------------- 190 (603)
T ss_pred ccceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccc--------------
Confidence 5555555555688889999999999999999776553 3 4559999999865444444444332
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sv 1507 (1678)
..|.|+.++|||..+++++.||+|.+||=.+|+.+..+.. ..+|.+.|.++
T Consensus 191 --------------------------kFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~---~~aHkGsIfal 241 (603)
T KOG0318|consen 191 --------------------------KFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED---SDAHKGSIFAL 241 (603)
T ss_pred --------------------------cceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC---CCCccccEEEE
Confidence 3478888899999999999999999999999999998875 23577889999
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEE--------------------------------------
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS-------------------------------------- 1549 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~-------------------------------------- 1549 (1678)
+|+ ||+..++++|.|.+++|||+.+++++++
T Consensus 242 sWs-----------PDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~ 310 (603)
T KOG0318|consen 242 SWS-----------PDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDP 310 (603)
T ss_pred EEC-----------CCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCC
Confidence 886 6678999999999999999987554433
Q ss_pred -----EeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCC---------------------------------
Q 000316 1550 -----WRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP--------------------------------- 1590 (1678)
Q Consensus 1550 -----l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~--------------------------------- 1590 (1678)
+.||...|++++ ++++++|.|||.||.|.-||..++....+
T Consensus 311 ~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~ 390 (603)
T KOG0318|consen 311 SVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVIS 390 (603)
T ss_pred ChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEe
Confidence 347888999999 99999999999999999999866431100
Q ss_pred --------------------------------------eEeecCCC----------CEEEEEecCCEEEEEeCCC-eEEE
Q 000316 1591 --------------------------------------TVFKGHTN----------GISGFSVWGQDVISISNNK-IGLS 1621 (1678)
Q Consensus 1591 --------------------------------------~~l~gH~~----------~V~afSpdg~~LaSgs~D~-I~vw 1621 (1678)
..++.++. ...+++|++..+|.|+.|+ |+||
T Consensus 391 ~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvy 470 (603)
T KOG0318|consen 391 LKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVY 470 (603)
T ss_pred cccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEE
Confidence 00111111 1114788999999999999 9999
Q ss_pred ecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1622 SLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1622 dl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.++.... . ...++ ..|.++|++++++||+.+||+|...+.|-+||
T Consensus 471 sl~g~~l--~----ee~~~------~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd 515 (603)
T KOG0318|consen 471 SLSGDEL--K----EEAKL------LEHRAAITDVAYSPDGAYLAAGDASRKVVLYD 515 (603)
T ss_pred EecCCcc--c----ceeee------ecccCCceEEEECCCCcEEEEeccCCcEEEEE
Confidence 9863110 0 00011 25899999999999999999999999999986
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-29 Score=305.29 Aligned_cols=212 Identities=14% Similarity=0.155 Sum_probs=165.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|+++++||+|+||.||+|++. .++..+|+|++.+.........+.+. +|+.+|+.++|||||++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~~~h~~iv~~~~ 68 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKV------DTKALYAMKTLRKKDVLLRNQVAHVK-------AERDILAEADNEWVVRLYY 68 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEEC------CCCCEEEEEEEeHHHhhhHHHHHHHH-------HHHHHHHhCCCCcCCeEEE
Confidence 5999999999999999999965 46889999998754322222222332 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+|.+++.+|+|||||+| +|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g--~~kL~D 144 (382)
T cd05625 69 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 144 (382)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEeE
Confidence 99999999999999985 9999997 345689999999999999999999999999999999999999999 899999
Q ss_pred cCCcccCCCCCccc--c----------------------------------cCCCCcceeecccccCccccccccccccc
Q 000316 322 KPLVGFNSIADWCT--I----------------------------------PTSPMIGCCIEGCSSQGLYADLKLSQSMD 365 (1678)
Q Consensus 322 FGlA~~~~~~~~~~--~----------------------------------~~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 365 (1678)
||+|+......... . .......+......||+.|||||++.+..
T Consensus 145 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (382)
T cd05625 145 FGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG 224 (382)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC
Confidence 99986322100000 0 00000001112345899999999999999
Q ss_pred ccccccccccCccchhhhHhhhccccC
Q 000316 366 WHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 366 y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
|+.++|+|+.|+|. |+.++...+|.+
T Consensus 225 ~~~~~DiwSlGvil-~elltG~~Pf~~ 250 (382)
T cd05625 225 YTQLCDWWSVGVIL-YEMLVGQPPFLA 250 (382)
T ss_pred CCCeeeEEechHHH-HHHHhCCCCCCC
Confidence 99999999999765 555444443333
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-28 Score=287.96 Aligned_cols=149 Identities=20% Similarity=0.179 Sum_probs=126.2
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.+. .++..||+|.+............+. +|+.+++.+. ||||+++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~lK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~~i~~~ 66 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDK------NTGKLVALKKTRLEMDEEGIPPTAL--------REISLLQMLSESIYIVRL 66 (295)
T ss_pred CCceEeeEecccCCeEEEEEEEC------CCCcEEEEEeehhhccccCCchHHH--------HHHHHHHHccCCCCccce
Confidence 46999999999999999999964 4678999999865432222222333 8999999995 6999999
Q ss_pred eeEEEeCCe-----EEEeccCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC-
Q 000316 241 LGLLKTSGL-----ITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD- 311 (1678)
Q Consensus 241 ~~~~~~~~~-----~~lVmEy~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~- 311 (1678)
++++...+. .|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 67 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~ 146 (295)
T cd07837 67 LDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146 (295)
T ss_pred eeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC
Confidence 999987665 89999999999999887432 245899999999999999999999999999999999999998
Q ss_pred CCceeEEEEecCCcc
Q 000316 312 SCWSWLYICDKPLVG 326 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~ 326 (1678)
++ .+||+|||+++
T Consensus 147 ~~--~~kl~dfg~~~ 159 (295)
T cd07837 147 KG--LLKIADLGLGR 159 (295)
T ss_pred CC--eEEEeecccce
Confidence 67 89999999986
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=269.48 Aligned_cols=143 Identities=24% Similarity=0.337 Sum_probs=120.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV 238 (1678)
..++|++.+++|+|.|++||.|.+. .+...++||+++.-+ .++.. ||++||+.|. |||||
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~------~~~eK~ViKiLKPVk-----kkKIk--------REikIL~nL~gg~NIi 96 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINI------TNNEKCVIKILKPVK-----KKKIK--------REIKILQNLRGGPNII 96 (338)
T ss_pred ccchHHHHHHHcCccHhhHhccccc------CCCceEEEeeechHH-----HHHHH--------HHHHHHHhccCCCCee
Confidence 4789999999999999999999843 456777888876422 12222 9999999997 99999
Q ss_pred ceeeEEEeCC--eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 239 PVLGLLKTSG--LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 239 ~l~~~~~~~~--~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+|+++..+.. ...+|+||+.. |...+.. .++..+++++++|+++||.|||++||+|||+||.|++|+... .
T Consensus 97 ~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~-r 170 (338)
T KOG0668|consen 97 KLLDIVKDPESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHEL-R 170 (338)
T ss_pred ehhhhhcCccccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhh-c
Confidence 9999998765 57899999996 6555543 478899999999999999999999999999999999999876 3
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.++|+|.|+|.+
T Consensus 171 kLrlIDWGLAEF 182 (338)
T KOG0668|consen 171 KLRLIDWGLAEF 182 (338)
T ss_pred eeeeeecchHhh
Confidence 899999999975
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-28 Score=285.96 Aligned_cols=148 Identities=23% Similarity=0.283 Sum_probs=129.7
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHH-HHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||++.+. .+++.+|+|.+.......... ..+. +|+++|+.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHK------GSGKYYALKILSKAKIVKLKQVEHVL--------NEKRILQSIRHPFLVNL 66 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCccce
Confidence 46999999999999999999965 467899999987543322222 2233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+|+||||++ ++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 142 (290)
T cd05580 67 YGSFQDDSNLYLVMEYVPGGELFSHLR--KSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIKI 142 (290)
T ss_pred eeEEEcCCeEEEEEecCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEE
Confidence 999999999999999996 59999998 346789999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 143 ~dfg~~~~ 150 (290)
T cd05580 143 TDFGFAKR 150 (290)
T ss_pred eeCCCccc
Confidence 99999874
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=288.86 Aligned_cols=320 Identities=17% Similarity=0.260 Sum_probs=251.1
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEE
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l 1366 (1678)
+|.|...| +.++=..|.|++||.. +.++..|.+|.|+|+.|+|+|++..++|||+ |-+|+||+..+.+|+
T Consensus 16 sFHP~rPw-----ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGD----DykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 16 SFHPKRPW-----ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGD----DYKIKVWNYKTRRCL 86 (1202)
T ss_pred ecCCCCCE-----EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCC----ccEEEEEecccceeh
Confidence 58898898 9999999999999999 9999999999999999999999999999997 899999999999999
Q ss_pred EEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCC
Q 000316 1367 SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1444 (1678)
Q Consensus 1367 ~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~ 1444 (1678)
.++.||-+.|..+.|++.-..+ ||.|.|||||+..+++|+.++++|.
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHn------------------------------- 135 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHN------------------------------- 135 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCc-------------------------------
Confidence 9999999999999999999988 6669999999999999999999863
Q ss_pred CeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEE-----------------eeCCCCc------ccCC
Q 000316 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-----------------WRGEPTE------LGFP 1501 (1678)
Q Consensus 1445 ~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~-----------------l~~~~~~------v~~~ 1501 (1678)
++|.|..|+|....++++|-|.|||+||+.--+.-+. +-+..+. -||.
T Consensus 136 ---------HYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD 206 (1202)
T KOG0292|consen 136 ---------HYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD 206 (1202)
T ss_pred ---------eEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence 3477777888899999999999999999853211000 1110000 1345
Q ss_pred CcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc--EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEE
Q 000316 1502 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLR 1578 (1678)
Q Consensus 1502 ~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~ 1578 (1678)
.-|+-++|.|.. .++++|++|..|++|.....+ .+.+.+||.+.|.++- +|...+++|.|.|++|+
T Consensus 207 RGVNwaAfhpTl-----------pliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksir 275 (1202)
T KOG0292|consen 207 RGVNWAAFHPTL-----------PLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIR 275 (1202)
T ss_pred cccceEEecCCc-----------ceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEE
Confidence 557777776533 489999999999999987544 5667789999999999 99989999999999999
Q ss_pred EEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCCeEEEecCCCCCC-----CCcceeccceeee---------
Q 000316 1579 IWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNKIGLSSLSKSADE-----DGQHRLVPQKLYM--------- 1642 (1678)
Q Consensus 1579 IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~I~vwdl~~~~~~-----~g~~~~~~~kl~~--------- 1642 (1678)
|||+... ..+.+++...+.-+ +..|..+++|.|-+.|+.||.+++.-.. ++-..+....++.
T Consensus 276 VwDm~kR--t~v~tfrrendRFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n~LfYvkd~~i~~~d~~t~~d~ 353 (1202)
T KOG0292|consen 276 VWDMTKR--TSVQTFRRENDRFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGNGLFYVKDRFIRSYDLRTQKDT 353 (1202)
T ss_pred EEecccc--cceeeeeccCCeEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCCEEEEEccceEEeeeccccccc
Confidence 9999876 66778876666544 6888899999998888888888743110 1111111111111
Q ss_pred ----eecCCCccCcEEEEEEecCCCEEEEEe
Q 000316 1643 ----VDNGAKNLSVLSSISILPFSRLFLVGT 1669 (1678)
Q Consensus 1643 ----~~~g~~h~~~I~svafsPd~~lLatgs 1669 (1678)
...+.....+..+++++|....+..|+
T Consensus 354 ~v~~lr~~g~~~~~~~smsYNpae~~vlics 384 (1202)
T KOG0292|consen 354 AVASLRRPGTLWQPPRSLSYNPAENAVLICS 384 (1202)
T ss_pred eeEeccCCCcccCCcceeeeccccCeEEEEe
Confidence 111111236788999999887766664
|
|
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-28 Score=285.63 Aligned_cols=149 Identities=23% Similarity=0.271 Sum_probs=128.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+...... .....+. +|+.+++.++|+||+++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~ni~~~ 68 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISR------INGQLVALKVISMKTEE-GVPFTAI--------REASLLKGLKHANIVLL 68 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEc------CCCcEEEEEEecccCcC-CCcHHHH--------HHHHHHHhcCCCCEeEE
Confidence 467999999999999999999864 46788999998654221 1112233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++++.+++..|+||||++++|.+.+.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~ 145 (291)
T cd07870 69 HDIIHTKETLTFVFEYMHTDLAQYMIQ-HPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecccCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC--cEEEe
Confidence 999999999999999999988888763 334578888999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 146 Dfg~~~~ 152 (291)
T cd07870 146 DFGLARA 152 (291)
T ss_pred ccccccc
Confidence 9999873
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=287.93 Aligned_cols=151 Identities=19% Similarity=0.235 Sum_probs=129.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|++|.||+|.++ .+++.+|+|.+............+. +|+++++.++||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDR------VTNETIALKKIRLEQEDEGVPSTAI--------REISLLKEMQHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEec------CCCcEEEEEehhhccccccchHHHH--------HHHHHHHhccCCCEeeEE
Confidence 57999999999999999999964 4678899999865433222223333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+++.++...|+||||++++|.+.+.......+++..++.++.||+.||+|||++||+||||||+||+++.++ ..+||+|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~-~~~kl~d 146 (294)
T PLN00009 68 DVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRT-NALKLAD 146 (294)
T ss_pred EEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCC-CEEEEcc
Confidence 999999999999999999999988754444578889999999999999999999999999999999998644 1799999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 147 fg~~~~ 152 (294)
T PLN00009 147 FGLARA 152 (294)
T ss_pred cccccc
Confidence 999974
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-28 Score=278.13 Aligned_cols=149 Identities=19% Similarity=0.196 Sum_probs=132.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.+. .++..+++|.+............+. +|+++++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRK------ADKRVYAMKQIDLSKMNRREREEAI--------DEARVLAKLDSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEc------CCCcEEEEEEeehhhCCHHHHHHHH--------HHHHHHHhcCCCCeehhee
Confidence 5889999999999999999964 4678999999876544444444554 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+++..|+||||++| +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~--~~~l~d 144 (256)
T cd08529 67 SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD--NVKIGD 144 (256)
T ss_pred eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC--CEEEcc
Confidence 99999999999999985 999999865456789999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 145 f~~~~~ 150 (256)
T cd08529 145 LGVAKL 150 (256)
T ss_pred ccccee
Confidence 999874
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-28 Score=295.51 Aligned_cols=150 Identities=27% Similarity=0.382 Sum_probs=128.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...+|++.+.||+|+||.||+|++. .++..||||.+.............. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~ni~~ 68 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNS------ETNEKVAIKKIANAFDNRIDAKRTL--------REIKLLRHLDHENVIA 68 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEec------CCCCeEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCccc
Confidence 3568999999999999999999964 5788999999875322222223333 8999999999999999
Q ss_pred eeeEEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 240 VLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 240 l~~~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+++++.... .+|+||||++++|.+++. ....+++..++.++.|++.||.|||+++|+||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~- 145 (337)
T cd07858 69 IKDIMPPPHREAFNDVYIVYELMDTDLHQIIR--SSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC- 145 (337)
T ss_pred hHHheecccccccCcEEEEEeCCCCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC-
Confidence 999887543 589999999999999987 456789999999999999999999999999999999999999998
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 146 -~~kL~Dfg~~~~ 157 (337)
T cd07858 146 -DLKICDFGLART 157 (337)
T ss_pred -CEEECcCccccc
Confidence 899999999874
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=267.17 Aligned_cols=277 Identities=23% Similarity=0.408 Sum_probs=237.3
Q ss_pred cccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCe
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1278 ~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dgt 1354 (1678)
++.+|.+.|.+ ++|++.+ +++++.|+.+++|++. +.....+.+|...+.++.|+++++.+++++. |+.
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~-----l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----~~~ 74 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKL-----LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS----DKT 74 (289)
T ss_pred HhcccCCCEEEEEEcCCCCE-----EEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC----CCe
Confidence 45689999986 8888876 9999999999999998 5678889999999999999999999999997 899
Q ss_pred EEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeC-CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccc
Q 000316 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1678)
Q Consensus 1355 VrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~-DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~ 1432 (1678)
|++||+.+++....+.+|...|.+++|++++..+ ++. |+.|++||+.+++....+..+.
T Consensus 75 i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------------------- 135 (289)
T cd00200 75 IRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHT------------------- 135 (289)
T ss_pred EEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCC-------------------
Confidence 9999999988889999999999999999987776 334 9999999999887776665321
Q ss_pred cccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1433 ~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
..++++++++++..+++++.|+.|++||+++++.+..+..+ ...+.++++.
T Consensus 136 ---------------------~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~-- 186 (289)
T cd00200 136 ---------------------DWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGH------TGEVNSVAFS-- 186 (289)
T ss_pred ---------------------CcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecC------ccccceEEEC--
Confidence 12566667777888888888999999999998888887743 3357778775
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCe
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1591 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1591 (1678)
++++.+++++.||.|++||+++++.+..+..|...+.++. ++++.++++++.||.|++||+.++ ....
T Consensus 187 ---------~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~--~~~~ 255 (289)
T cd00200 187 ---------PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTG--ECVQ 255 (289)
T ss_pred ---------CCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCc--eeEE
Confidence 4556889999999999999999999999988999999999 888889999888999999999886 5566
Q ss_pred EeecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1592 VFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1592 ~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
.+.+|...|.+ |+++++.+++++.|+ |++|+
T Consensus 256 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 256 TLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 77889888884 888889999999999 99996
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-28 Score=285.38 Aligned_cols=148 Identities=22% Similarity=0.259 Sum_probs=128.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|+++++||.|+||.||+|++. .++..+++|.+... .......+. +|+.+++.++||||+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNK------ETGALAAAKVIETK--SEEELEDYM--------VEIEILATCNHPYIVKL 74 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEEC------CCCceEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCcEeee
Confidence 467999999999999999999964 46789999998653 233334444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+..+..+|+||||++| +|..++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl 151 (292)
T cd06644 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG--DIKL 151 (292)
T ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC--CEEE
Confidence 9999999999999999996 88777763 345689999999999999999999999999999999999999988 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 152 ~dfg~~~~ 159 (292)
T cd06644 152 ADFGVSAK 159 (292)
T ss_pred ccCcccee
Confidence 99998863
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-28 Score=287.78 Aligned_cols=146 Identities=17% Similarity=0.240 Sum_probs=127.7
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.++||+|+||.||++.+. .++..+|+|.+... .......++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 65 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHR------PSGLIMARKLIHLE-IKPAIRNQII--------RELKVLHECNSPYIVGFY 65 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEc------CCCeEEEEEEeccc-cCHHHHHHHH--------HHHHHHHhCCCCCCCeEE
Confidence 36999999999999999999864 46788999998653 2222223344 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++.+++.+|+||||++| +|.+++. ....+++..++.++.|++.||.|||+ ++|+||||||+|||++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~ey~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--~~~l 141 (308)
T cd06615 66 GAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--EIKL 141 (308)
T ss_pred EEEeeCCEEEEEeeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC--cEEE
Confidence 999999999999999995 9999998 34668999999999999999999998 6999999999999999998 8999
Q ss_pred EecCCcc
Q 000316 320 CDKPLVG 326 (1678)
Q Consensus 320 ~DFGlA~ 326 (1678)
+|||+++
T Consensus 142 ~dfg~~~ 148 (308)
T cd06615 142 CDFGVSG 148 (308)
T ss_pred ccCCCcc
Confidence 9999886
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-28 Score=282.82 Aligned_cols=148 Identities=15% Similarity=0.192 Sum_probs=127.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.+.|++.+.||+|+||.||+|.+. .++..+|+|.+..... ...++. +|+.+++.+ +||||++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTGD---EEEEIK--------QEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEc------CCCcEEEEEEEEcCCc---cHHHHH--------HHHHHHHHhcCCCCeee
Confidence 456899999999999999999864 5678999999865322 122333 899999998 6999999
Q ss_pred eeeEEEeC------CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 240 VLGLLKTS------GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 240 l~~~~~~~------~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+++++... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||+++.+
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~ 147 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC
Confidence 99999753 468999999995 99999986555678999999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCccc
Q 000316 313 CWSWLYICDKPLVGF 327 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~ 327 (1678)
+ .+||+|||+++.
T Consensus 148 ~--~~~l~Dfg~~~~ 160 (272)
T cd06637 148 A--EVKLVDFGVSAQ 160 (272)
T ss_pred C--CEEEccCCCcee
Confidence 9 899999999874
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=303.52 Aligned_cols=205 Identities=16% Similarity=0.184 Sum_probs=162.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|++++.||+|+||+||+|++. .+++.||+|++.+.........+.+. +|+.+|+.++||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~l~~ 68 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKV------DTHALYAMKTLRKKDVLNRNQVAHVK-------AERDILAEADNEWVVKLYY 68 (381)
T ss_pred CceEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhcCCCCeeeeEE
Confidence 5899999999999999999965 57889999999764333322222222 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ ++||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~--~~kL~D 144 (381)
T cd05626 69 SFQDKDNLYFVMDYIPGGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIKLTD 144 (381)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC--CEEEee
Confidence 99999999999999985 9999998 455689999999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCccc--c-------c---------------------------CCCCcceeecccccCccccccccccccc
Q 000316 322 KPLVGFNSIADWCT--I-------P---------------------------TSPMIGCCIEGCSSQGLYADLKLSQSMD 365 (1678)
Q Consensus 322 FGlA~~~~~~~~~~--~-------~---------------------------~~~~~~~~~~~~~gt~~Y~APE~~~~~~ 365 (1678)
||+++......... . . ......+......||+.|||||++.+..
T Consensus 145 FGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (381)
T cd05626 145 FGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG 224 (381)
T ss_pred CcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC
Confidence 99986432100000 0 0 0000001112345899999999999999
Q ss_pred ccccccccccCccchhhhHh
Q 000316 366 WHSQFNRWWRGELSNFEYLL 385 (1678)
Q Consensus 366 y~~~~d~W~~G~isnfeyL~ 385 (1678)
|+.++|+|+.|+|. |+.++
T Consensus 225 ~~~~~DiwSlG~il-~ellt 243 (381)
T cd05626 225 YTQLCDWWSVGVIL-FEMLV 243 (381)
T ss_pred CCCccceeehhhHH-HHHHh
Confidence 99999999999665 44443
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=303.57 Aligned_cols=205 Identities=16% Similarity=0.184 Sum_probs=161.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|++++.||+|+||.||+|++. .+++.||+|++.+...........+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~------~~~~~~avK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKV------DTNALYAMKTLRKADVLMRNQAAHVK-------AERDILAEADNEWVVKLY 67 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEcHHHHHhhhhHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 36999999999999999999965 46889999998653222222222222 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.|.+++.+|+|||||+ |+|.+++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~i~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~ikL~ 143 (376)
T cd05598 68 YSFQDKDNLYFVMDYIPGGDMMSLLI--RLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLT 143 (376)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC--CEEEE
Confidence 99999999999999998 59999998 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCccc-------------------c--c-----------CCCCcceeecccccCcccccccccccccccc
Q 000316 321 DKPLVGFNSIADWCT-------------------I--P-----------TSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~-------------------~--~-----------~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~ 368 (1678)
|||+|.......... . . ......+......||+.|||||++.+..++.
T Consensus 144 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 223 (376)
T cd05598 144 DFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 223 (376)
T ss_pred eCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCc
Confidence 999985321100000 0 0 0000001122346899999999999999999
Q ss_pred cccccccCccchhhhH
Q 000316 369 QFNRWWRGELSNFEYL 384 (1678)
Q Consensus 369 ~~d~W~~G~isnfeyL 384 (1678)
++|+|+.|+|. |+.+
T Consensus 224 ~~DiwSlGvil-yell 238 (376)
T cd05598 224 LCDWWSVGVIL-YEML 238 (376)
T ss_pred ceeeeecccee-eehh
Confidence 99999999775 4444
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=286.13 Aligned_cols=149 Identities=15% Similarity=0.201 Sum_probs=128.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|++. ..+..+|+|.+... .......++. +|+.+++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHR------PTGVTMAMKEIRLE-LDESKFNQII--------MELDILHKAVSPYIVDFY 65 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEc------CCCcEEEEEEeecc-cCHHHHHHHH--------HHHHHHHhcCCCcHHhhh
Confidence 46899999999999999999964 46789999998653 2233334444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFS-PNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~-~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++..++.+|+||||++| +|..++... ....+++..++.++.||+.||.|||+ +||+||||||+||+++.++ .+|
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 143 (286)
T cd06622 66 GAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--QVK 143 (286)
T ss_pred hheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--CEE
Confidence 999999999999999996 998888732 13468999999999999999999997 6999999999999999988 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 144 l~dfg~~~~ 152 (286)
T cd06622 144 LCDFGVSGN 152 (286)
T ss_pred EeecCCccc
Confidence 999999874
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.5e-27 Score=282.93 Aligned_cols=367 Identities=16% Similarity=0.182 Sum_probs=276.5
Q ss_pred hccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC-ceeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1274 EATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1274 ~~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~-~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
....++.||+..|.. |+..|.. |+|||.|+.|.+||+-+ .-+..++||.++|+..-|..+...++|.|.
T Consensus 98 ~~~~tfngHK~AVt~l~fd~~G~r-----laSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sK--- 169 (888)
T KOG0306|consen 98 EILITFNGHKAAVTTLKFDKIGTR-----LASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSK--- 169 (888)
T ss_pred ceeeeecccccceEEEEEcccCce-----EeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEecc---
Confidence 456788999999995 8777776 99999999999999874 467789999999999999998889999998
Q ss_pred CCCeEEEEeCCCCe------------------------------------------------------------------
Q 000316 1351 FKGTVQKWELTRIN------------------------------------------------------------------ 1364 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~------------------------------------------------------------------ 1364 (1678)
|+.|++||+++..
T Consensus 170 -Ds~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i 248 (888)
T KOG0306|consen 170 -DSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREI 248 (888)
T ss_pred -CceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCcee
Confidence 8999999862210
Q ss_pred --------------------------------------------------------------------------------
Q 000316 1365 -------------------------------------------------------------------------------- 1364 (1678)
Q Consensus 1365 -------------------------------------------------------------------------------- 1364 (1678)
T Consensus 249 ~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv 328 (888)
T KOG0306|consen 249 NLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDV 328 (888)
T ss_pred EEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEE
Confidence
Q ss_pred ------------------E------------------EEEEecCCccEEEEeecCCCCcEEeC-CCcEEEEECCCCceeE
Q 000316 1365 ------------------C------------------VSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLS 1407 (1678)
Q Consensus 1365 ------------------~------------------l~~l~gH~~~V~sV~fs~~~~~laS~-DgtVrIWD~~tg~~~~ 1407 (1678)
+ ..++.||...|.+++++.+...++|+ .+.|+||+..+.+|++
T Consensus 329 ~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciR 408 (888)
T KOG0306|consen 329 TPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIR 408 (888)
T ss_pred EecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeE
Confidence 0 01234788899999998887777887 7899999999999999
Q ss_pred EecccCccccccCCCCCCccccccccccccccCCCCC-CeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCC--
Q 000316 1408 VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS-GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQ-- 1484 (1678)
Q Consensus 1408 ~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~-~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~t-- 1484 (1678)
++..... .+...-|.+..++.....+.+..+.-.+. -+..+.-+...+-.++.+||+..+++||.|.+|++||..-
T Consensus 409 Ti~~~y~-l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~ 487 (888)
T KOG0306|consen 409 TITCGYI-LASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVV 487 (888)
T ss_pred EeccccE-EEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEe
Confidence 9986521 11122233333322222221111111000 0111111222345566667899999999999999999742
Q ss_pred ---CeeeEEeeC-CCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEE
Q 000316 1485 ---GQKLHLWRG-EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKL 1560 (1678)
Q Consensus 1485 ---g~~l~~l~~-~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sv 1560 (1678)
|...+.+.- |.........|.|+.++ |||.+||+|--|.+|+||-+.+-+..-++-||.-+|.|+
T Consensus 488 ~~~gt~~k~lsl~~~rtLel~ddvL~v~~S-----------pdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~sm 556 (888)
T KOG0306|consen 488 SVPGTQKKVLSLKHTRTLELEDDVLCVSVS-----------PDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSM 556 (888)
T ss_pred ccCcccceeeeeccceEEeccccEEEEEEc-----------CCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEE
Confidence 211111221 22223456778888775 667899999999999999999999999999999999999
Q ss_pred E-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceec
Q 000316 1561 A-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLV 1636 (1678)
Q Consensus 1561 a-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~ 1636 (1678)
. +||+++++|||.|++|+||-+.=| .+-..+-+|.+.|.+ |-|+...+.|+|.|+ |+.||-.. . ..
T Consensus 557 DIS~DSklivTgSADKnVKiWGLdFG--DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k------F--e~ 626 (888)
T KOG0306|consen 557 DISPDSKLIVTGSADKNVKIWGLDFG--DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK------F--EE 626 (888)
T ss_pred eccCCcCeEEeccCCCceEEeccccc--hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhh------h--hh
Confidence 9 999999999999999999999888 667789999999996 899999999999999 99999430 1 01
Q ss_pred cceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1637 PQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1637 ~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
.+++ .+|...|++++.+|+|.+++++|.|.+||+|
T Consensus 627 iq~L------~~H~~ev~cLav~~~G~~vvs~shD~sIRlw 661 (888)
T KOG0306|consen 627 IQKL------DGHHSEVWCLAVSPNGSFVVSSSHDKSIRLW 661 (888)
T ss_pred heee------ccchheeeeeEEcCCCCeEEeccCCceeEee
Confidence 1222 2488999999999999999999999999999
|
|
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=287.00 Aligned_cols=152 Identities=25% Similarity=0.297 Sum_probs=132.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.+. .++..+|+|.+........ ....+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLK------GTGKLFALKVLDKKEMIKRNKVKRVL--------TEQEILATLDHPFLPTL 66 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEc------CCCcEEEEEEEeccccchHHHHHHHH--------HHHHHHHhCCCCCchhh
Confidence 46999999999999999999964 3678999999976543332 222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+.+....|+||||+.| +|.+++...+...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l 144 (316)
T cd05574 67 YASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--HIML 144 (316)
T ss_pred eeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC--CEEE
Confidence 9999999999999999985 999999855556799999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCC
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlA~~~~ 329 (1678)
+|||++....
T Consensus 145 ~dfg~~~~~~ 154 (316)
T cd05574 145 SDFDLSKQSD 154 (316)
T ss_pred eecchhhccc
Confidence 9999998543
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.3e-28 Score=283.43 Aligned_cols=146 Identities=19% Similarity=0.208 Sum_probs=127.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|++.+.||+|+||.||++.+. .++..+++|.+... .......+. +|+++++.++||||+++++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~ii~~~~ 69 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNK------ETGVLAAAKVIDTK--SEEELEDYM--------VEIDILASCDHPNIVKLLD 69 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEEC------CCCeEEEEEEeCCC--CHHHHHHHH--------HHHHHHHHCCCCCeeeEEE
Confidence 4788999999999999999964 46788999998643 233334444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++..|+||||+++ +|..++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 70 ~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--~~kl~d 146 (282)
T cd06643 70 AFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--DIKLAD 146 (282)
T ss_pred EEeeCCEEEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--CEEEcc
Confidence 99999999999999995 88887763 345689999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 147 fg~~~~ 152 (282)
T cd06643 147 FGVSAK 152 (282)
T ss_pred cccccc
Confidence 999874
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-27 Score=276.82 Aligned_cols=280 Identities=12% Similarity=0.168 Sum_probs=239.3
Q ss_pred ccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeE
Q 000316 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1678)
Q Consensus 1279 l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtV 1355 (1678)
+..|++.|-+ |.|...| +.++=..|+|.|||.+ +..++++.-..-+|++..|-+.-+.+++||+ |+.|
T Consensus 9 ~~~rSdRVKsVd~HPtePw-----~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsD----D~~I 79 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPW-----ILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSD----DMQI 79 (794)
T ss_pred hhccCCceeeeecCCCCce-----EEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecC----CceE
Confidence 3447888886 8999998 8899999999999998 6789999988999999999999999999997 9999
Q ss_pred EEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCC-ceeEEecccCccccccCCCCCCccccccc
Q 000316 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1678)
Q Consensus 1356 rlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg-~~~~~l~~~~~~~~~~~s~s~~~~~~~~~ 1432 (1678)
||++..|++.+.+|.+|.+.|.+|+.+|...++ +|.|-+||+||.+.+ .|.++|.+|+
T Consensus 80 rVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~------------------- 140 (794)
T KOG0276|consen 80 RVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHE------------------- 140 (794)
T ss_pred EEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcc-------------------
Confidence 999999999999999999999999999999988 556999999999754 6778888764
Q ss_pred cccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1433 ~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
--|.+++|.|. |.+.+++++-|+|||+|.+.+..+..++++|.. -|+||++-+.
T Consensus 141 -----------HyVMqv~fnPk---------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHek------GVN~Vdyy~~ 194 (794)
T KOG0276|consen 141 -----------HYVMQVAFNPK---------DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEK------GVNCVDYYTG 194 (794)
T ss_pred -----------eEEEEEEecCC---------CccceeeeeccccEEEEEcCCCCCceeeecccc------CcceEEeccC
Confidence 23566667665 688999999999999999999999999997654 4889998542
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCe
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1591 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1591 (1678)
.+-.++++|++|.+|+|||..|.+|++++.||...|..+. +|.-.+++|||.||+||||+..+- +...
T Consensus 195 ---------gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty--~lE~ 263 (794)
T KOG0276|consen 195 ---------GDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY--KLEK 263 (794)
T ss_pred ---------CCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce--ehhh
Confidence 2336999999999999999999999999999999999999 888899999999999999998876 3334
Q ss_pred EeecCCCCEEEEE--ecCCEEEEEeCCCeEEEec
Q 000316 1592 VFKGHTNGISGFS--VWGQDVISISNNKIGLSSL 1623 (1678)
Q Consensus 1592 ~l~gH~~~V~afS--pdg~~LaSgs~D~I~vwdl 1623 (1678)
++.-.-+.|+++. ..++.++.|.+++..+.++
T Consensus 264 tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v~l 297 (794)
T KOG0276|consen 264 TLNYGLERVWCIAAHKGDGKIAVGFDEGSVTVKL 297 (794)
T ss_pred hhhcCCceEEEEeecCCCCeEEEeccCCcEEEEc
Confidence 5555566778766 5667788888877444444
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=300.94 Aligned_cols=201 Identities=16% Similarity=0.206 Sum_probs=160.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|++. .++..||||++.+...........++ +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKK------DTGHIYAMKKLRKSEMLEKEQVAHVR-------AERDILAEADNPWVVKLY 67 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCcceE
Confidence 47999999999999999999975 46789999999764322222222332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++|.+++.+|+|||||+| +|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~ 143 (364)
T cd05599 68 YSFQDENYLYLIMEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIKLS 143 (364)
T ss_pred EEEEcCCeEEEEECCCCCcHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEe
Confidence 999999999999999985 9999998 355789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccc----cC-----------CCC------------cceeecccccCccccccccccccccccccccc
Q 000316 321 DKPLVGFNSIADWCTI----PT-----------SPM------------IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRW 373 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~----~~-----------~~~------------~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W 373 (1678)
|||+++.......... .. .+. .........||+.|+|||++.+..|+.++|+|
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 223 (364)
T cd05599 144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW 223 (364)
T ss_pred ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence 9999975432110000 00 000 00001123489999999999999999999999
Q ss_pred ccCccc
Q 000316 374 WRGELS 379 (1678)
Q Consensus 374 ~~G~is 379 (1678)
+.|++.
T Consensus 224 SlG~il 229 (364)
T cd05599 224 SLGVIM 229 (364)
T ss_pred cchhHH
Confidence 999664
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=282.20 Aligned_cols=143 Identities=15% Similarity=0.117 Sum_probs=123.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|.+. .++..+|+|.+.... ......++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 65 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHL------LTRRILAVKVIPLDI-TVELQKQIM--------SELEILYKCDSPYIIGFY 65 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEc------CCCcEEEEEEEecCC-ChHHHHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 36889999999999999999964 467889999987542 222333444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+...+..++||||+++ +|..+. .+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~--~~~l~ 137 (279)
T cd06619 66 GAFFVENRISICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG--QVKLC 137 (279)
T ss_pred EEEEECCEEEEEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999996 665432 367889999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 138 dfg~~~~ 144 (279)
T cd06619 138 DFGVSTQ 144 (279)
T ss_pred eCCccee
Confidence 9999873
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=278.88 Aligned_cols=150 Identities=17% Similarity=0.136 Sum_probs=126.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.. .++..+|+|.+...........+.... ..+|+.+|+.++|+||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-------~~~~~~avk~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-------NQGQLIAVKQVELDTSNVLAAEKEYEK----LQEEVDLLKSLKHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEE-------cCCCeEEEEEeecCccchhhHHHHHHH----HHHHHHHHHhcCCCCEeeEee
Confidence 488899999999999999974 357889999987543222111111110 118999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+.+..++||||++| +|.+++. ....+++..+..++.|++.||+|||+.||+|+||||+||++++++ .+||+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 145 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILN--RFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLID 145 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC--eEEecc
Confidence 99999999999999985 9999997 345688999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 146 fg~~~~ 151 (265)
T cd06631 146 FGCARR 151 (265)
T ss_pred chhhHh
Confidence 999874
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=295.20 Aligned_cols=227 Identities=15% Similarity=0.153 Sum_probs=183.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|.+++.||-|+||+|.+++. ..+...+|+|.+.+...........++ .|..||.+.+.+.||+||.
T Consensus 630 mFvkik~iGvGAFGeV~Lv~K------vDT~~lYAmKTLrKaDVl~rnQvaHVK-------AERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRK------VDTRALYAMKTLRKADVLMRNQVAHVK-------AERDILAEADNEWVVRLYY 696 (1034)
T ss_pred ceEEEeeecccccceeEEEee------cchhhHHHHhhhHHHHHHhhhhhhhhh-------hhhhhHhhcCCcceEEEEE
Confidence 589999999999999999983 367889999999876555555455555 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.|++++++|+||||++| |+..+|- +.+.|.|..+++|+.++..|+++.|+.|.|||||||+|||||.+| +|||+|
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG--HIKLTD 772 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 772 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC--ceeeee
Confidence 99999999999999995 9999987 578899999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCc--cccc------C-----------------------CCCcceeecccccCcccccccccccccccccc
Q 000316 322 KPLVGFNSIADW--CTIP------T-----------------------SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQF 370 (1678)
Q Consensus 322 FGlA~~~~~~~~--~~~~------~-----------------------~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~ 370 (1678)
|||+.-...... .... . .....|.....+||+.|+|||++....|+..|
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 999974321100 0000 0 01122444566899999999999999999999
Q ss_pred cccccCccchhhhHhhhccccCCCCCCCcCCcccceEe
Q 000316 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI 408 (1678)
Q Consensus 371 d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~pv~pwv~ 408 (1678)
|.|+.|.|. ||+|..-..|-..+.. -+||.|.-|-.
T Consensus 853 dwws~gvil-~em~~g~~pf~~~tp~-~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 853 DWWSVGVIL-YEMLVGQPPFLADTPG-ETQYKVINWRN 888 (1034)
T ss_pred hhhHhhHHH-HHHhhCCCCccCCCCC-cceeeeeehhh
Confidence 999999776 6665544444433332 37888888864
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=293.35 Aligned_cols=147 Identities=25% Similarity=0.295 Sum_probs=124.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|.++ .++..||+|.+..... ...+... +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~------~~~~~v~iK~i~~~~~--~~~~~~~--------~Ei~~l~~l~h~~i~~~ 67 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDS------DCDKRVAVKKIVLTDP--QSVKHAL--------REIKIIRRLDHDNIVKV 67 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEEC------CCCcEEEEEEEecCCC--chHHHHH--------HHHHHHHhcCCCcchhh
Confidence 578999999999999999999965 5788999999865432 2223333 89999999999999999
Q ss_pred eeEEEeC--------------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCC
Q 000316 241 LGLLKTS--------------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1678)
Q Consensus 241 ~~~~~~~--------------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 306 (1678)
++++... ...|+||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N 144 (342)
T cd07854 68 YEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 144 (342)
T ss_pred HhhhcccccccccccccccccceEEEEeecccccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 9877654 3589999999999998886 3468999999999999999999999999999999999
Q ss_pred eEecCCCceeEEEEecCCccc
Q 000316 307 VLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 307 ILl~~~g~~~lKL~DFGlA~~ 327 (1678)
|+++.++ ..+||+|||+++.
T Consensus 145 ili~~~~-~~~kl~dfg~~~~ 164 (342)
T cd07854 145 VFINTED-LVLKIGDFGLARI 164 (342)
T ss_pred EEEcCCC-ceEEECCccccee
Confidence 9998544 2789999999863
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.7e-28 Score=284.38 Aligned_cols=148 Identities=19% Similarity=0.205 Sum_probs=130.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||++.+. .++..+|+|.+... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHK------ETGLFAAAKIIQIE--SEEELEDFM--------VEIDILSECKHPNIVGL 67 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEc------CCCcEEEEEEEeeC--CHHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 467999999999999999999864 36788999998653 233334454 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..+...|+||||+++ +|.+++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~--~~~l 144 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLE-LERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG--DVKL 144 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC--CEEE
Confidence 9999999999999999996 99999873 345689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 145 ~d~g~~~~ 152 (280)
T cd06611 145 ADFGVSAK 152 (280)
T ss_pred ccCccchh
Confidence 99998764
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-28 Score=285.85 Aligned_cols=148 Identities=20% Similarity=0.295 Sum_probs=127.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.++||+|+||.||+|.+. .++..+|+|.+.+..........+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHK------ETGQIVAIKKFLESEDDKMVKKIAM--------REIRMLKQLRHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEEC------CCCCEEEEEeHhhccCcchhhHHHH--------HHHHHHHhcCCcchhhHH
Confidence 46999999999999999999964 3578999999876433332222333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.++...|+||||+++ .|..++. ....+++..++.++.||+.||.|||++||+||||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~--~~~l~ 142 (286)
T cd07846 67 EVFRRKKRLYLVFEFVDHTVLDDLEK--YPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG--VVKLC 142 (286)
T ss_pred HhcccCCeEEEEEecCCccHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--cEEEE
Confidence 999999999999999996 6666655 334589999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 143 dfg~~~~ 149 (286)
T cd07846 143 DFGFART 149 (286)
T ss_pred eeeeeee
Confidence 9999874
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-30 Score=282.94 Aligned_cols=197 Identities=15% Similarity=0.193 Sum_probs=173.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|.++++||+|+||.||+|.++ +.|.++|||.+... .+..+.+ +||.||++++.|+||++||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~------EsG~v~AIK~VPV~----sDLQEII--------KEISIMQQC~S~yVVKYYG 95 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHR------ESGHVLAIKKVPVD----TDLQEII--------KEISIMQQCKSKYVVKYYG 95 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHh------ccCcEEEEEecCcc----chHHHHH--------HHHHHHHHcCCchhhhhhh
Confidence 4888999999999999999976 78999999998653 3444555 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+.....++||||||. |+..++++. +++.+++.++..+++..++||+|||...-||||||..|||++.+| +.||+|
T Consensus 96 SYFK~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G--~AKLAD 172 (502)
T KOG0574|consen 96 SYFKHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG--IAKLAD 172 (502)
T ss_pred hhccCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--hhhhhh
Confidence 9999999999999999 899999984 678899999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC-CCCC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDY 398 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs-~~dl 398 (1678)
||.|...... .+. .....|||+|||||++....|+..+|+|+.| ++.+++..||+ |.|+
T Consensus 173 FGVAGQLTDT-----MAK------RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLG-------ITaIEMAEG~PPYsDI 232 (502)
T KOG0574|consen 173 FGVAGQLTDT-----MAK------RNTVIGTPFWMAPEVIEEIGYDTKADIWSLG-------ITAIEMAEGRPPYSDI 232 (502)
T ss_pred ccccchhhhh-----HHh------hCccccCcccccHHHHHHhccchhhhHhhhc-------chhhhhhcCCCCcccc
Confidence 9999865421 111 1124599999999999999999999999999 88899999998 5664
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-26 Score=251.79 Aligned_cols=277 Identities=15% Similarity=0.238 Sum_probs=219.7
Q ss_pred cccccCCCCceEe--ecCC-CCCCCCCeEEEEeCCCCEEEEeCCC----ceeEEe-ccccccEEEEEEecCCCEEEEEec
Q 000316 1276 TSNLMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKA----SILSSI-RAHHGALRSVAVGQDECTVFTAGI 1347 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpd-g~~~~~~~LasgS~D~~v~lWd~~~----~~l~tl-~gH~~~V~svafspdg~~LaSgS~ 1347 (1678)
...+.||++.||. ++|. |.. |||||.|+.||+|+..+ .+...+ .+|+.+|++|+|+|.|++|++||
T Consensus 7 ~~~~~gh~~r~W~~awhp~~g~i-----lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aS- 80 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAWHPGKGVI-----LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASAS- 80 (312)
T ss_pred EEeecCCCCcEEEEEeccCCceE-----EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEee-
Confidence 3567899999985 7887 665 99999999999999883 244444 47999999999999999999999
Q ss_pred CCCCCCeEEEEeCCCC--eEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCC---ceeEEecccCccccccC
Q 000316 1348 GPGFKGTVQKWELTRI--NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG---KLLSVFAEQSMDSLHGG 1420 (1678)
Q Consensus 1348 d~~~DgtVrlWDl~tg--~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg---~~~~~l~~~~~~~~~~~ 1420 (1678)
||.++.||.-..+ +|+.+++||+..|.+|+|+++|.+||+| |+.|-||.+..+ ++...++.|..
T Consensus 81 ---FD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~Htq------ 151 (312)
T KOG0645|consen 81 ---FDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQ------ 151 (312)
T ss_pred ---ccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccc------
Confidence 6999999987644 7899999999999999999999999655 999999998755 35566665543
Q ss_pred CCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECC---CCeeeEEeeCCCCc
Q 000316 1421 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN---QGQKLHLWRGEPTE 1497 (1678)
Q Consensus 1421 s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~---tg~~l~~l~~~~~~ 1497 (1678)
.|..+.|+ |....|+++|.|++||+|+-. .-+++.++.+|.
T Consensus 152 ------------------------DVK~V~WH----------Pt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~-- 195 (312)
T KOG0645|consen 152 ------------------------DVKHVIWH----------PTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHE-- 195 (312)
T ss_pred ------------------------cccEEEEc----------CCcceeEEeccCCeEEEEeecCCCCeeEEEEecCcc--
Confidence 34444555 457899999999999999876 236788888654
Q ss_pred ccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe-ccCCCeEEEEcCCCCEEEEEeCCCc
Q 000316 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKLAAPEDHLLVSSSLDKT 1576 (1678)
Q Consensus 1498 v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~-gH~~~V~svaspdg~~LaSgS~Dgt 1576 (1678)
.+|.+++|. +.|..++++++|++|+||-..+. +. .|+..+..+... ...++|++.|+.
T Consensus 196 ----~TVW~~~F~-----------~~G~rl~s~sdD~tv~Iw~~~~~-----~~~~~sr~~Y~v~W~-~~~IaS~ggD~~ 254 (312)
T KOG0645|consen 196 ----NTVWSLAFD-----------NIGSRLVSCSDDGTVSIWRLYTD-----LSGMHSRALYDVPWD-NGVIASGGGDDA 254 (312)
T ss_pred ----ceEEEEEec-----------CCCceEEEecCCcceEeeeeccC-----cchhcccceEeeeec-ccceEeccCCCE
Confidence 468899886 45679999999999999987632 22 478889988843 458999999999
Q ss_pred EEEEEcCCCCCCCCe-----EeecCCCCEEE--EEec-CCEEEEEeCCC-eEEEecC
Q 000316 1577 LRIWDLRRNWPSQPT-----VFKGHTNGISG--FSVW-GQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1577 I~IWDl~~~~~~~~~-----~l~gH~~~V~a--fSpd-g~~LaSgs~D~-I~vwdl~ 1624 (1678)
|+++.-......+.. .-..|...|++ +.|. ...|++|++|| |++|.+.
T Consensus 255 i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 255 IRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred EEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 999987653212222 23567788886 6774 67899999999 9999863
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=278.12 Aligned_cols=151 Identities=21% Similarity=0.216 Sum_probs=127.3
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH---HHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ---ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~---~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+........ ...+.... ..+|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~h~~i~~ 70 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNA------SSGELMAVKQVELPSVSASSKDRKRSMLDA----LAREIALLKELQHENIVQ 70 (267)
T ss_pred CccccceeecCCCeEEEEEEec------CCCcEEEEEEecCCCcccchhHHHHHHHHH----HHHHHHHHHhcCCCCeee
Confidence 4788899999999999999964 3578899998865433221 11111111 128999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++...+..++||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++|++||||||+||++++++ .+|
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~--~~~ 146 (267)
T cd06628 71 YLGSSLDADHLNIFLEYVPGGSVAALLN--NYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG--GIK 146 (267)
T ss_pred EEEEEEeCCccEEEEEecCCCCHHHHHH--hccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC--CEE
Confidence 99999999999999999986 9999998 346688999999999999999999999999999999999999998 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 147 l~dfg~~~~ 155 (267)
T cd06628 147 ISDFGISKK 155 (267)
T ss_pred ecccCCCcc
Confidence 999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=276.74 Aligned_cols=146 Identities=21% Similarity=0.269 Sum_probs=122.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|.-++.+|.|.- .|.-|-+. -.++.||+|++.......... .++.||..++..++|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~------v~~~~v~ikk~~~pf~n~~~a--------kra~rel~l~~~v~~~nii~l 80 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQ------VLGRPVAIKKLSRPFQNQTHA--------KRAYRELKLMKCVNHKNIISL 80 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchh------hccCceehhhhcCccccCccc--------hhhhhhhhhhhhhcccceeee
Confidence 568999999999998 66656544 467889999986542221111 245699999999999999999
Q ss_pred eeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 241 LGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 241 ~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+.+|.-.. .+|+|||+|..+|...+. ..+.-..++++++|++.|+.|||+.||+||||||+||++..++
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~- 155 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELMDANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC- 155 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhhhhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh-
Confidence 99997543 689999999999999987 2356778899999999999999999999999999999999999
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||.|||+|+.
T Consensus 156 -~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 156 -TLKILDFGLART 167 (369)
T ss_pred -heeeccchhhcc
Confidence 999999999984
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=281.28 Aligned_cols=149 Identities=21% Similarity=0.290 Sum_probs=127.2
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHh-hccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~i-L~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.++ .++..||+|.++..... ....+++ .|+.+ ++.++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~iv~~ 65 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHV------PTGTIMAVKRIRATVNS-QEQKRLL--------MDLDISMRSVDCPYTVTF 65 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEc------CCCcEEEEEEEecCCCc-HHHHHHH--------HHHHHHHHHcCCCCeeee
Confidence 47999999999999999999965 56899999998764322 2233444 56654 677799999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++..++.+|+||||++|+|.+++... ....+++..++.++.||+.||.|||++ +++||||||+|||++.++ .+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--~~ 143 (283)
T cd06617 66 YGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--QV 143 (283)
T ss_pred eEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CE
Confidence 9999999999999999999998888642 345689999999999999999999997 999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 144 kl~dfg~~~~ 153 (283)
T cd06617 144 KLCDFGISGY 153 (283)
T ss_pred EEeecccccc
Confidence 9999999874
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=275.93 Aligned_cols=148 Identities=20% Similarity=0.168 Sum_probs=130.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++++. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSK------EDGKQYVIKEINISKMSPKEREESR--------KEVAVLSNMKHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEc------CCCCEEEEEEEEhHhCChHHHHHHH--------HHHHHHHhCCCCCeeeeEe
Confidence 5899999999999999999964 4678899999875433333334444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++...+..++||||+++ +|.+++.......+++..+..++.|++.||.|||++|++|+||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~--~~~l~d 144 (256)
T cd08218 67 SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TIKLGD 144 (256)
T ss_pred eecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEEee
Confidence 99999999999999985 999999854445678999999999999999999999999999999999999988 899999
Q ss_pred cCCcc
Q 000316 322 KPLVG 326 (1678)
Q Consensus 322 FGlA~ 326 (1678)
||++.
T Consensus 145 ~~~~~ 149 (256)
T cd08218 145 FGIAR 149 (256)
T ss_pred cccee
Confidence 99986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-28 Score=282.19 Aligned_cols=145 Identities=24% Similarity=0.245 Sum_probs=124.5
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccceee
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 242 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l~~ 242 (1678)
|+++++||+|+||.||+|.+. .++..+|+|.++...... ...... +|+.++.++. ||||+++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~-~~~~~~--------~e~~~l~~l~~h~~i~~~~~ 65 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSR------KTGKYYAIKCMKKHFKSL-EQVNNL--------REIQALRRLSPHPNILRLIE 65 (282)
T ss_pred CceEeeccccccceEEEEEEc------CCCcEEEEEEehhccCCc-hhhhHH--------HHHHHHhhcCCCCCccceEE
Confidence 678999999999999999964 467889999987542222 122222 7999999885 999999999
Q ss_pred EEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 243 LLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 243 ~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
++.++ +.+++||||++++|.+.+.. ....+++..++.++.|++.||.|||++||+||||||+||+++. + .+||+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~--~~kl~ 141 (282)
T cd07831 66 VLFDRKTGRLALVFELMDMNLYELIKG-RKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D--ILKLA 141 (282)
T ss_pred EEecCCCCcEEEEEecCCccHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C--CeEEE
Confidence 99988 89999999999999998874 2356899999999999999999999999999999999999999 7 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||+++.
T Consensus 142 dfg~~~~ 148 (282)
T cd07831 142 DFGSCRG 148 (282)
T ss_pred ecccccc
Confidence 9999874
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-29 Score=299.89 Aligned_cols=204 Identities=17% Similarity=0.182 Sum_probs=178.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+.+++||+|+||.+++++++ .+...+++|.+...+......... .+|+.++++++|||||.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk------~~~~~~vlK~I~l~~~t~~~r~~A--------~~E~~lis~~~hP~iv~y 68 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHK------SDDKLYVLKKINLEKLTEPERRSA--------IQEMDLLSKLLHPNIVEY 68 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhc------cCCceEEEEEEeccccCchhhHHH--------HHHHHHHHhccCCCeeee
Confidence 678999999999999999999975 466799999998876666554433 399999999999999999
Q ss_pred eeEEEeCCe-EEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLKTSGL-ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~-~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++.|..++. ++|||+||+| +|.+.|...++..+++..+..|+.|++.||.|||++.|+|||||+.||+++.++ .||
T Consensus 69 ~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--~Vk 146 (426)
T KOG0589|consen 69 KDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--KVK 146 (426)
T ss_pred ccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--cee
Confidence 999999887 9999999995 999999987778899999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
|.|||+|+...... .....++|||.||.||++.+.+|+.+.|+|+.||+. ||.+..-..|.+
T Consensus 147 LgDfGlaK~l~~~~-----------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~-yEm~~lk~aF~a 208 (426)
T KOG0589|consen 147 LGDFGLAKILNPED-----------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCL-YEMCTLKPAFKA 208 (426)
T ss_pred ecchhhhhhcCCch-----------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchH-HHHHhcccccCc
Confidence 99999999765321 012346799999999999999999999999999987 777765554444
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=282.83 Aligned_cols=148 Identities=17% Similarity=0.184 Sum_probs=129.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++++.||+|+||.||++.+. ..+..||+|.+......... ...+. +|+++++.++||||+++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 66 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHK------ETRQRFAMKKINKQNLILRNQIQQVF--------VERDILTFAENPFVVSM 66 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEEC------CCCcEEEEEEeehhhhhhHHHHHHHH--------HHHHHHHhCCCCCeeee
Confidence 36999999999999999999965 46788999998764322222 22233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+.+++.+++||||++| +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~--~~~l 142 (305)
T cd05609 67 FCSFETKRHLCMVMEYVEGGDCATLLK--NIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG--HIKL 142 (305)
T ss_pred EEEEecCCEEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC--CEEE
Confidence 9999999999999999995 9999997 345689999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 143 ~dfg~~~~ 150 (305)
T cd05609 143 TDFGLSKI 150 (305)
T ss_pred eeCCCccc
Confidence 99999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=290.34 Aligned_cols=149 Identities=22% Similarity=0.294 Sum_probs=127.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||.||+|.+. .++..||+|.+............+. +|+.+|+.++||||++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 78 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDR------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMKHENVIG 78 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEEC------CCCcEEEEEEecccccchHHHHHHH--------HHHHHHHhcCCCCccc
Confidence 4678999999999999999999864 5688999999865322222222333 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++.... .+++||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07880 79 LLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC 155 (343)
T ss_pred eeeeecCCccccccceEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 999998654 468999999889998887 34689999999999999999999999999999999999999998
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 156 --~~kl~dfg~~~~ 167 (343)
T cd07880 156 --ELKILDFGLARQ 167 (343)
T ss_pred --CEEEeecccccc
Confidence 899999999863
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=274.70 Aligned_cols=149 Identities=21% Similarity=0.283 Sum_probs=132.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|+.++.||+|+||.||.+++. .++..+++|.+...........++. +|+.+++.++|+||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRT------EDDSLVVWKEVNLTRLSEKERRDAL--------NEIVILSLLQHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEc------CCCcEEEEEEEeecccchhHHHHHH--------HHHHHHHhCCCCCeeEEEe
Confidence 5999999999999999999865 5678899999876544444444554 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+.+.+++||||++| +|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~--~~kl~d 144 (256)
T cd08221 67 HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGD 144 (256)
T ss_pred EEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC--CEEECc
Confidence 99999999999999985 999999854456789999999999999999999999999999999999999999 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 145 ~~~~~~ 150 (256)
T cd08221 145 FGISKI 150 (256)
T ss_pred CcceEE
Confidence 999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=282.68 Aligned_cols=150 Identities=14% Similarity=0.108 Sum_probs=130.2
Q ss_pred ccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCc
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpN 236 (1678)
......+|++.+.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++|||
T Consensus 15 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~ 78 (296)
T cd06654 15 VGDPKKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQP--KKELII--------NEILVMRENKNPN 78 (296)
T ss_pred cCCcccceeeEEEecCCCCeEEEEEEEC------CCCcEEEEEEEecCCcc--hHHHHH--------HHHHHHHhCCCCC
Confidence 3344678999999999999999999864 46788999998764332 222333 8999999999999
Q ss_pred ccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
|+++++.+..+...|+||||++| +|.+++. ...+++.++..++.|++.||.|||++||+||||||+|||++.++
T Consensus 79 v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~-- 153 (296)
T cd06654 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG-- 153 (296)
T ss_pred EeeEEEEEEeCCEEEEeecccCCCCHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--
Confidence 99999999999999999999985 9999987 34578999999999999999999999999999999999999998
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 154 ~~kl~dfg~~~~ 165 (296)
T cd06654 154 SVKLTDFGFCAQ 165 (296)
T ss_pred CEEECccccchh
Confidence 899999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.2e-28 Score=281.28 Aligned_cols=147 Identities=19% Similarity=0.212 Sum_probs=129.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|++. .++..+|+|.++... ......+. +|+.+++.++||||+++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~--~~~~~~~~--------~e~~~~~~l~h~~ii~~ 71 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNV------NTGELAAIKVIKLEP--GEDFAVVQ--------QEIIMMKDCKHSNIVAY 71 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEc------CCCcEEEEEEEecCc--hhHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 458999999999999999999864 467889999986532 12222233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+.+|+||||+++ +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~~l 147 (267)
T cd06645 72 FGSYLRRDKLWICMEFCGGGSLQDIYH--VTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG--HVKL 147 (267)
T ss_pred EEEEEeCCEEEEEEeccCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999995 9999987 456789999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 148 ~dfg~~~~ 155 (267)
T cd06645 148 ADFGVSAQ 155 (267)
T ss_pred CcceeeeE
Confidence 99999864
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=271.07 Aligned_cols=282 Identities=18% Similarity=0.267 Sum_probs=231.8
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC---eEEEEEecCCccEEEEeecCCCCcEEeC--CC
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI---NCVSGYYGHEEVVNDICVLSSSGRIASC--DG 1393 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg---~~l~~l~gH~~~V~sV~fs~~~~~laS~--Dg 1393 (1678)
..+++..|++.|+-+.||++|++|||||. |.|+.+|++... +...++.||..+|..|.|+|+++++.+| |.
T Consensus 216 t~qil~~htdEVWfl~FS~nGkyLAsaSk----D~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e 291 (519)
T KOG0293|consen 216 TWQILQDHTDEVWFLQFSHNGKYLASASK----DSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE 291 (519)
T ss_pred hhhhHhhCCCcEEEEEEcCCCeeEeeccC----CceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH
Confidence 45678899999999999999999999998 999999987543 4478899999999999999999999555 88
Q ss_pred cEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEEC
Q 000316 1394 TLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1473 (1678)
Q Consensus 1394 tVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~ 1473 (1678)
.+++||+.+|.+...+.... +..+++.+|.|||..+++|+.
T Consensus 292 ~~~lwDv~tgd~~~~y~~~~---------------------------------------~~S~~sc~W~pDg~~~V~Gs~ 332 (519)
T KOG0293|consen 292 VLSLWDVDTGDLRHLYPSGL---------------------------------------GFSVSSCAWCPDGFRFVTGSP 332 (519)
T ss_pred heeeccCCcchhhhhcccCc---------------------------------------CCCcceeEEccCCceeEecCC
Confidence 99999999999876665310 112567778889999999999
Q ss_pred CCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 000316 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1553 (1678)
Q Consensus 1474 DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH 1553 (1678)
|+++..||+. |+.+..|++.. ...|.++++. +||.++++...|..|++++..+...+..+. -
T Consensus 333 dr~i~~wdlD-gn~~~~W~gvr-----~~~v~dlait-----------~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis-e 394 (519)
T KOG0293|consen 333 DRTIIMWDLD-GNILGNWEGVR-----DPKVHDLAIT-----------YDGKYVLLVTVDKKIRLYNREARVDRGLIS-E 394 (519)
T ss_pred CCcEEEecCC-cchhhcccccc-----cceeEEEEEc-----------CCCcEEEEEecccceeeechhhhhhhcccc-c
Confidence 9999999985 77777777543 2457777764 567899999999999999998766655444 4
Q ss_pred CCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE----EEEec-CCEEEEEeCCC-eEEEecCCC
Q 000316 1554 DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS----GFSVW-GQDVISISNNK-IGLSSLSKS 1626 (1678)
Q Consensus 1554 ~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~----afSpd-g~~LaSgs~D~-I~vwdl~~~ 1626 (1678)
..+|+++. +.|+++++..=.+..|.+||+... ..+..+.||+.+-. ||... ..+++|||.|+ |++|+..
T Consensus 395 ~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~--~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~-- 470 (519)
T KOG0293|consen 395 EQPITSFSISKDGKLALVNLQDQEIHLWDLEEN--KLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI-- 470 (519)
T ss_pred cCceeEEEEcCCCcEEEEEcccCeeEEeecchh--hHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEcc--
Confidence 56899999 999999999999999999999966 56678889987533 46654 47899999999 9999953
Q ss_pred CCCCCcceeccceeeeeecCCCccCcEEEEEEecCC-CEEEEEeCCCcEEEc
Q 000316 1627 ADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS-RLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1627 ~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~-~lLatgs~DG~IrIw 1677 (1678)
.+++..+..| |...|++|+|+|.. .+||+||+||+||||
T Consensus 471 ----------sgkll~~LsG--Hs~~vNcVswNP~~p~m~ASasDDgtIRIW 510 (519)
T KOG0293|consen 471 ----------SGKLLAVLSG--HSKTVNCVSWNPADPEMFASASDDGTIRIW 510 (519)
T ss_pred ----------CCceeEeecC--CcceeeEEecCCCCHHHhhccCCCCeEEEe
Confidence 2355555555 88999999999966 689999999999999
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=289.52 Aligned_cols=158 Identities=16% Similarity=0.246 Sum_probs=129.3
Q ss_pred cCCCeeE-eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH--HHHHHHh--cCCCchhHHHhhccCCC
Q 000316 160 IMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRL--IGVPSFDESSVPGCLRH 234 (1678)
Q Consensus 160 ~~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~--~~~~l~~--~~~~~~~Ei~iL~~l~H 234 (1678)
..++|.. .+.||+|+||+||+|.+. ..+..||+|.+......... ..+.... +.....+|+++++.++|
T Consensus 6 ~~~ry~~~~~~ig~G~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 79 (335)
T PTZ00024 6 ISERYIQKGAHLGEGTYGKVEKAYDT------LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKH 79 (335)
T ss_pred cccchhhhhhcccCCCceeEEEEEEC------CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCC
Confidence 3567865 577999999999999965 46789999998654222100 0111000 00012489999999999
Q ss_pred CcccceeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 235 PNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 235 pNIV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
|||+++++++..++..++||||++|+|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 80 ~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~- 156 (335)
T PTZ00024 80 ENIMGLVDVYVEGDFINLVMDIMASDLKKVVD--RKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG- 156 (335)
T ss_pred cceeeeeEEEecCCcEEEEEeccccCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC-
Confidence 99999999999999999999999999999997 455689999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCccc
Q 000316 315 SWLYICDKPLVGF 327 (1678)
Q Consensus 315 ~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 157 -~~kl~dfg~~~~ 168 (335)
T PTZ00024 157 -ICKIADFGLARR 168 (335)
T ss_pred -CEEECCccceee
Confidence 899999999974
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=277.92 Aligned_cols=147 Identities=18% Similarity=0.192 Sum_probs=128.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|++. .++..+|+|++...... ....+. +|+.+++.++||||+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~ii~~ 71 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNL------HTGELAAVKIIKLEPGD--DFSLIQ--------QEIFMVKECKHCNIVAY 71 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEEC------CCCeEEEEEEEecCccc--hHHHHH--------HHHHHHHhcCCCCeeee
Confidence 467999999999999999999964 46789999998653221 122222 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+|+||||+++ +|.+++. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~iv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~--~~~l 147 (267)
T cd06646 72 FGSYLSREKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG--DVKL 147 (267)
T ss_pred eEEEEeCCEEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999995 9999987 345689999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 148 ~dfg~~~~ 155 (267)
T cd06646 148 ADFGVAAK 155 (267)
T ss_pred CcCcccee
Confidence 99999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=278.55 Aligned_cols=148 Identities=18% Similarity=0.186 Sum_probs=126.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH----HHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE----SKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~----~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
+|+..+.||+|+||.||++.+. .++..+|+|.+......... ...+. +|+++++.++||||+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~alk~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv 66 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDV------KTGTLMAVKQVTYVRNTSSEQEEVVEALR--------KEIRLMARLNHPHII 66 (268)
T ss_pred CccccceecCcCceEEEEEEEc------CCCcEEEEEEeecccCCchhHHHHHHHHH--------HHHHHHHHcCCCcee
Confidence 4888999999999999999864 56788999998754322211 12222 899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++.+.+..++||||++| +|.+++. ....+++..+..++.||+.||.|||++|++||||||+||+++.++ ..+
T Consensus 67 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~-~~~ 143 (268)
T cd06630 67 RMLGATCEDSHFNLFVEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTG-QRL 143 (268)
T ss_pred hhhceeccCCeEEEEEeccCCCcHHHHHH--HhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEE
Confidence 999999999999999999995 9999997 345688999999999999999999999999999999999998775 269
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 144 ~l~dfg~~~~ 153 (268)
T cd06630 144 RIADFGAAAR 153 (268)
T ss_pred EEcccccccc
Confidence 9999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=281.51 Aligned_cols=148 Identities=18% Similarity=0.211 Sum_probs=128.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.++||+|++|.||+|++. .++..||+|.+...... .....+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 65 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNR------TTGEIVALKEIHLDAEE-GTPSTAI--------REISLMKELKHENIVRLHD 65 (284)
T ss_pred CceEeeeeccCCceEEEEEEEC------CCCeEEEEEEecccccc-cchHHHH--------HHHHHHHhhcCCCEeeeee
Confidence 5899999999999999999964 46889999998754322 1122233 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+.+..++||||++++|.+++.... ...+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~--~~~l~d 143 (284)
T cd07836 66 VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG--ELKLAD 143 (284)
T ss_pred eEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--cEEEee
Confidence 999999999999999999999887432 24689999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 144 ~g~~~~ 149 (284)
T cd07836 144 FGLARA 149 (284)
T ss_pred cchhhh
Confidence 999863
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=277.09 Aligned_cols=148 Identities=17% Similarity=0.117 Sum_probs=125.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH--HHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~--~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
+|+..+.||+|+||.||+|.+. .++..+|+|.+......... ....+. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~ 69 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDV------DTGRELAAKQVQFDPESPETSKEVSALE-------CEIQLLKNLQHERIVQY 69 (266)
T ss_pred CccccceecCCCCEEEEEEEEc------CCCcEEEEEEeecCcCCchhHHHHHHHH-------HHHHHHHHcCCCCeeeE
Confidence 6899999999999999999864 46789999998754322211 112222 89999999999999999
Q ss_pred eeEEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++.+. ..++++|||+++ +|.+++. ....+++..++.++.|++.||+|||+++|+||||||+||+++.++ .+
T Consensus 70 ~~~~~~~~~~~~~l~~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~--~~ 145 (266)
T cd06651 70 YGCLRDRAEKTLTIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--NV 145 (266)
T ss_pred EEEEEcCCCCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CE
Confidence 9998763 578999999985 9999997 345688999999999999999999999999999999999999988 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 146 ~l~dfg~~~~ 155 (266)
T cd06651 146 KLGDFGASKR 155 (266)
T ss_pred EEccCCCccc
Confidence 9999999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=288.04 Aligned_cols=149 Identities=23% Similarity=0.296 Sum_probs=127.0
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. .++..||+|++............+. +|+.+++.++||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~iv~ 80 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHENVIG 80 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEc------CCCeEEEEEEecCcchhhHHHHHHH--------HHHHHHHHcCCCcccc
Confidence 4678999999999999999999864 4678999999875432222223333 8999999999999999
Q ss_pred eeeEEEeC------CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~------~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++... ...|++++++.++|.++++ ...+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 81 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eeeeeeecccccccccEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCC
Confidence 99998643 3578999999889998887 23589999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 158 --~~kl~dfg~~~~ 169 (345)
T cd07877 158 --ELKILDFGLARH 169 (345)
T ss_pred --CEEEeccccccc
Confidence 899999999863
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=282.35 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=129.2
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
....+|++++.||+|+||.||+|.+. .++..||+|.+...... ....+. +|+.+++.++||||+
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~ 79 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDI------ATGQEVAIKQMNLQQQP--KKELII--------NEILVMRENKNPNIV 79 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEEC------CCCCEEEEEEEecCccc--hHHHHH--------HHHHHHHhCCCCCEe
Confidence 34578999999999999999999964 56889999998754322 222233 899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++..++..|+||||++| +|.+++. ...+++..+..++.|++.||.|||+.||+||||||+|||++.++ .+
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~--~~ 154 (297)
T cd06656 80 NYLDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG--SV 154 (297)
T ss_pred eEEEEEecCCEEEEeecccCCCCHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CE
Confidence 999999999999999999985 9999987 34578999999999999999999999999999999999999998 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 155 ~l~Dfg~~~~ 164 (297)
T cd06656 155 KLTDFGFCAQ 164 (297)
T ss_pred EECcCccceE
Confidence 9999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=280.80 Aligned_cols=148 Identities=22% Similarity=0.253 Sum_probs=129.2
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++.+.||+|++|.||+|.++ .++..||+|++............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDK------LTGEIVALKKIRLETEDEGVPSTAI--------REISLLKELNHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEc------CCCCEEEEEEeecccccccchhHHH--------HHHHHHHhcCCCCccCHhhe
Confidence 678899999999999999964 4688999999876433222223333 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
+.+++..|+||||++++|.+++.......+++..+..++.|++.||.|||+++++||||+|+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~--~~~l~df~ 144 (283)
T cd07835 67 VHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG--ALKLADFG 144 (283)
T ss_pred eccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--cEEEeecc
Confidence 9999999999999998999999854445689999999999999999999999999999999999999988 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
+++.
T Consensus 145 ~~~~ 148 (283)
T cd07835 145 LARA 148 (283)
T ss_pred cccc
Confidence 9863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.6e-27 Score=272.16 Aligned_cols=150 Identities=21% Similarity=0.200 Sum_probs=130.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+|+.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRK------ADQKLVIIKQIPVEQMTKDERLAAQ--------NECQVLKLLSHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEc------CCCcEEEEEEEeccccccHHHHHHH--------HHHHHHhhCCCCchhheee
Confidence 5899999999999999999964 4678899999876544444444444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+..++..++||||++| +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ ..+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~-~~~~l~d 145 (256)
T cd08220 67 NFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHK-MVVKIGD 145 (256)
T ss_pred eEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC-CEEEEcc
Confidence 99999999999999985 999999854455689999999999999999999999999999999999998655 2689999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 146 ~~~~~~ 151 (256)
T cd08220 146 FGISKI 151 (256)
T ss_pred CCCcee
Confidence 999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=295.86 Aligned_cols=205 Identities=16% Similarity=0.168 Sum_probs=162.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|+++ .++..||+|++.............++ +|+.++..++||||++++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~iv~~~ 67 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKK------DTGHIYAMKILRKADMLEKEQVAHIR-------AERDILVEADGAWVVKMF 67 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 46999999999999999999965 46889999999753322222222332 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+.+++.+|+||||++| +|.+++. ....+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~--~vkL~ 143 (360)
T cd05627 68 YSFQDKRNLYLIMEFLPGGDMMTLLM--KKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVKLS 143 (360)
T ss_pred EEEEcCCEEEEEEeCCCCccHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEe
Confidence 999999999999999995 9999997 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccc------cC----------C---C-----CcceeecccccCcccccccccccccccccccccccC
Q 000316 321 DKPLVGFNSIADWCTI------PT----------S---P-----MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~------~~----------~---~-----~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
|||+++.......... .. . . ..........||+.|+|||++.+..|+.++|+|+.|
T Consensus 144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 223 (360)
T cd05627 144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (360)
T ss_pred eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence 9999875432110000 00 0 0 000001123589999999999999999999999999
Q ss_pred ccchhhhH
Q 000316 377 ELSNFEYL 384 (1678)
Q Consensus 377 ~isnfeyL 384 (1678)
++. |+++
T Consensus 224 vil-yel~ 230 (360)
T cd05627 224 VIM-YEML 230 (360)
T ss_pred cee-eecc
Confidence 765 4443
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-28 Score=297.40 Aligned_cols=197 Identities=17% Similarity=0.215 Sum_probs=160.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|++. .++..+|+|.+.+.........+.+. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHK------SSQKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCEeeE
Confidence 468999999999999999999965 46789999998753332222223332 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++.+|+|||||+| +|.+++.. ..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~--~~kL 183 (370)
T cd05621 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKL 183 (370)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEE
Confidence 9999999999999999984 99999973 3578999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccc----ccccccccccCccchhhhHhh
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLF 386 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~----y~~~~d~W~~G~isnfeyL~~ 386 (1678)
+|||+|+........ ......||+.|||||++.+.. |+.++|+|+.|++. |+.++.
T Consensus 184 ~DFG~a~~~~~~~~~----------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~il-yell~G 243 (370)
T cd05621 184 ADFGTCMKMDETGMV----------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-FEMLVG 243 (370)
T ss_pred EecccceecccCCce----------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHH-HHHHhC
Confidence 999999854311100 011234799999999987643 78899999999664 444433
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=280.38 Aligned_cols=142 Identities=15% Similarity=0.154 Sum_probs=117.4
Q ss_pred eeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHH---hhccCCCCcccceeeEEE
Q 000316 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESS---VPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~---iL~~l~HpNIV~l~~~~~ 245 (1678)
.||+|+||.||++.+. .++..+|+|.+.+............. +|.. ++...+||||+.+++++.
T Consensus 1 ~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~ 67 (279)
T cd05633 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLAL-------NERIMLSLVSTGDCPFIVCMTYAFH 67 (279)
T ss_pred CcccCCCeEEEEEEEC------CCCcEEEEEEEEccccccchHHHHHH-------HHHHHHHHHhhCCCCcEeEEEEEEe
Confidence 4899999999999964 46889999998765433222222111 4443 344457999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++..++||||++| +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~--~~~l~dfg~ 143 (279)
T cd05633 68 TPDKLCFILDLMNGGDLHYHLS--QHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGL 143 (279)
T ss_pred cCCeEEEEEecCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999995 9999887 455689999999999999999999999999999999999999998 899999999
Q ss_pred ccc
Q 000316 325 VGF 327 (1678)
Q Consensus 325 A~~ 327 (1678)
++.
T Consensus 144 ~~~ 146 (279)
T cd05633 144 ACD 146 (279)
T ss_pred cee
Confidence 863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=292.58 Aligned_cols=190 Identities=17% Similarity=0.227 Sum_probs=160.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++++.||+|+||.||+|++. .++..||+|++.+...... ....+. +|+.+|+.++||||+++
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~iv~~ 66 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKK------DTGEIVALKRMKKSLLFKLNEVRHVL--------TERDILTTTKSEWLVKL 66 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhCCCCCCccE
Confidence 36999999999999999999964 4678999999976432221 222233 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kL 142 (333)
T cd05600 67 LYAFQDDEYLYLAMEYVPGGDFRTLLN--NLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--HIKL 142 (333)
T ss_pred EEEEEcCCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999985 9999997 456789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhH
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL 384 (1678)
+|||+++.... ......||+.|+|||++.+..|+.++|+|+.|++. |+++
T Consensus 143 ~Dfg~a~~~~~--------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~ell 192 (333)
T cd05600 143 TDFGLSKGIVT--------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCML-YEFL 192 (333)
T ss_pred EeCcCCccccc--------------ccCCcccCccccChhHhcCCCCCCccceecchHHH-hhhh
Confidence 99999985432 01123478999999999999999999999999664 4443
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=289.09 Aligned_cols=147 Identities=23% Similarity=0.352 Sum_probs=128.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|++. .++..+|+|.+..........+.+. +|+.+++.++||||+++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDK------RTGRKVAIKKISNVFDDLIDAKRIL--------REIKLLRHLRHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeC------CCCcEEEEEeeccccccchhhhhHH--------HHHHHHHhcCCcchhhhhh
Confidence 5899999999999999999964 4578899999875422222223333 8999999999999999999
Q ss_pred EEEeCC-----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 243 ~~~~~~-----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++.... .+|+||||++++|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~--~~ 142 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELMETDLHKVIK--SPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DL 142 (330)
T ss_pred hhcccCcccccceEEEecchhhhHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 998875 799999999999999997 345789999999999999999999999999999999999999998 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||++..
T Consensus 143 ~L~dfg~~~~ 152 (330)
T cd07834 143 KICDFGLARG 152 (330)
T ss_pred EEcccCceEe
Confidence 9999999874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=287.51 Aligned_cols=148 Identities=24% Similarity=0.308 Sum_probs=125.0
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|.+.+.||+|+||.||+|++. .++..||+|.+.+..........+. +|+.+++.++||||++
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~niv~ 78 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDK------RTGEKVAIKKLSRPFQSEIFAKRAY--------RELTLLKHMQHENVIG 78 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeC------CCCcEEEEEEecCccccccchhHHH--------HHHHHHHhcCCCCccc
Confidence 3568999999999999999999864 4678999999875322222222333 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++.... .+|+||||+..+|..++. ..+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~ 154 (342)
T cd07879 79 LLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC 154 (342)
T ss_pred hhheecccccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence 999987543 569999999888877653 3578999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 155 --~~kL~dfg~~~~ 166 (342)
T cd07879 155 --ELKILDFGLARH 166 (342)
T ss_pred --CEEEeeCCCCcC
Confidence 899999999873
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=292.71 Aligned_cols=215 Identities=17% Similarity=0.208 Sum_probs=180.0
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
+....|.+.++||+|.|+.|.+|++. .++..||||.+.+..........+. +|+++|+.|+|||||
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~------~t~~~VaiK~idkt~ln~~~~~k~~--------rev~imk~l~HPnIv 118 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHI------LTGTEVAIKIIDKTQLNPSKRQKLG--------REVDIMKSLNHPNIV 118 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEec------CCCceEEEEEehhcccChHHHHHHH--------HHHHHHHhcCCccee
Confidence 34678999999999999999999976 4688999999998766655544444 999999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
+++.+..+...+|+||||+. |++++++. +.+.+.+..++.++.|+++|++|||+++|+|||||.+||||+.+. .+
T Consensus 119 kl~~v~~t~~~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~m--ni 194 (596)
T KOG0586|consen 119 KLFSVIETEATLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENM--NI 194 (596)
T ss_pred eeeeeeeecceeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccc--ce
Confidence 99999999999999999998 59999999 567788899999999999999999999999999999999999999 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccccc-ccccccccCccchhhhHhhhccccCCCCC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWH-SQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~-~~~d~W~~G~isnfeyL~~ln~~aGRs~~ 396 (1678)
||+|||++.+.... ....+.| |++.|+|||++.+.+|+ +.+|.|+.|.+. |-.+...-+|-|.+..
T Consensus 195 kIaDfgfS~~~~~~------~~lqt~c------gsppyAaPEl~~g~~y~gpe~D~Wslgvvl-y~LV~GsLPFDG~~lk 261 (596)
T KOG0586|consen 195 KIADFGFSTFFDYG------LMLQTFC------GSPPYAAPELFNGKKYDGPEVDIWSLGVVL-YALVEGSLPFDGQNLK 261 (596)
T ss_pred eeeccccceeeccc------ccccccC------CCCCccChHhhcCcccCCcceehhhhhhhh-eeeeecccccCCcccc
Confidence 99999999875521 1122223 78999999999999995 599999999876 4445555556666665
Q ss_pred CCcCCccc
Q 000316 397 DYTFHMVM 404 (1678)
Q Consensus 397 dl~q~pv~ 404 (1678)
.+....++
T Consensus 262 ~Lr~rvl~ 269 (596)
T KOG0586|consen 262 ELRPRVLR 269 (596)
T ss_pred cccchhee
Confidence 55554443
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-27 Score=272.65 Aligned_cols=149 Identities=19% Similarity=0.175 Sum_probs=129.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||.|+||+||+|... .++..+|+|++....... ....+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICL------PNNEKVAIKRIDLEKCQT-SVDELR--------KEVQAMSQCNHPNVVKYY 65 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEc------CCCcEEEEEEeccCCcch-HHHHHH--------HHHHHHHhcCCCCEEEEE
Confidence 47999999999999999999854 467889999987643333 333444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+.+..++..++|||+++| +|.+++.... ...+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~--~~~l 143 (267)
T cd06610 66 TSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG--SVKI 143 (267)
T ss_pred EEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEEE
Confidence 999999999999999985 9999997432 25689999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 144 ~df~~~~~ 151 (267)
T cd06610 144 ADFGVSAS 151 (267)
T ss_pred cccchHHH
Confidence 99999864
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=284.78 Aligned_cols=149 Identities=19% Similarity=0.227 Sum_probs=123.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~ 241 (1678)
+|++.+.||+|+||.||++++.. ...+..+|+|.+............+. +|+.+++.+ +||||++++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~ 68 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAE----TSEEETVAIKKITNVFSKKILAKRAL--------RELKLLRHFRGHKNITCLY 68 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCC----CCcCceEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCChheee
Confidence 58999999999999999999641 11267899999864322222223333 899999999 599999999
Q ss_pred eEEEeC----CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 242 GLLKTS----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 242 ~~~~~~----~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
+.+... ..+|++|||++++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~~~~e~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~--~~ 144 (332)
T cd07857 69 DMDIVFPGNFNELYLYEELMEADLHQIIR--SGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--EL 144 (332)
T ss_pred eeeeeccccCCcEEEEEecccCCHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC--CE
Confidence 975432 4688999999999999997 456789999999999999999999999999999999999999999 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 145 kl~Dfg~a~~ 154 (332)
T cd07857 145 KICDFGLARG 154 (332)
T ss_pred EeCcCCCcee
Confidence 9999999974
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=288.18 Aligned_cols=149 Identities=24% Similarity=0.316 Sum_probs=128.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|++. .++..+|+|.+.............. +|+.+++.++||||++
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 78 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDT------KTGRKVAIKKLSRPFQSAIHAKRTY--------RELRLLKHMDHENVIG 78 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEEC------CCCcEEEEEecccccchhhHHHHHH--------HHHHHHHhccCCCHHH
Confidence 3668999999999999999999964 4678899999865322222223333 8999999999999999
Q ss_pred eeeEEEeCCe------EEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSGL------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~~------~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++++...+. .++|+||++++|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07851 79 LLDVFTPASSLEDFQDVYLVTHLMGADLNNIVK---CQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155 (343)
T ss_pred HHHHhhccccccccccEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 9998876654 89999999889999987 34689999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCccc
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~ 327 (1678)
.+||+|||++..
T Consensus 156 --~~kL~dfg~~~~ 167 (343)
T cd07851 156 --ELKILDFGLARH 167 (343)
T ss_pred --CEEEcccccccc
Confidence 899999999874
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-27 Score=277.83 Aligned_cols=148 Identities=16% Similarity=0.186 Sum_probs=126.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.+.|++.+.||.|+||.||+|++. .++..+|+|.+.... ....++. +|+.+++.+ +||||++
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~a~K~~~~~~---~~~~~~~--------~e~~~l~~~~~h~~i~~ 77 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTE---DEEEEIK--------LEINMLKKYSHHRNIAT 77 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEc------CCCcEEEEEEEecCh---HHHHHHH--------HHHHHHHHhcCCCcEEE
Confidence 467999999999999999999964 467899999986432 2222333 788998888 7999999
Q ss_pred eeeEEEe------CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 240 VLGLLKT------SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 240 l~~~~~~------~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+++++.. ...+|+||||+++ +|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~ 157 (282)
T cd06636 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157 (282)
T ss_pred EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 9999853 4578999999985 99999986555668899999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCccc
Q 000316 313 CWSWLYICDKPLVGF 327 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~ 327 (1678)
+ .+||+|||+++.
T Consensus 158 ~--~~~l~dfg~~~~ 170 (282)
T cd06636 158 A--EVKLVDFGVSAQ 170 (282)
T ss_pred C--CEEEeeCcchhh
Confidence 9 899999999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=293.24 Aligned_cols=145 Identities=19% Similarity=0.163 Sum_probs=121.2
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
..+.|++...+|.|+|+.|..+.+. .+.+..++|++.+...... +|+.++... +||||+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~------~t~~~~~vkii~~~~~~~~--------------~e~~~~~~~~~h~niv 379 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESS------PTDQEPAVKIISKRADDNQ--------------DEIPISLLVRDHPNIV 379 (612)
T ss_pred cchhhccccccCCCCccceeeeecc------ccccchhheeccccccccc--------------cccchhhhhcCCCcce
Confidence 3668999999999999999999965 5778899999987533222 677665555 799999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe-cCCCcee
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL-TDSCWSW 316 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl-~~~g~~~ 316 (1678)
++.+++.++.+.|+|||.+.| .+.+.+.. ...+. .++..|++||+.|+.|||++|||||||||+|||+ ++.+ +
T Consensus 380 ~~~~v~~~~~~~~~v~e~l~g~ell~ri~~--~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g--~ 454 (612)
T KOG0603|consen 380 KSHDVYEDGKEIYLVMELLDGGELLRRIRS--KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG--H 454 (612)
T ss_pred eecceecCCceeeeeehhccccHHHHHHHh--cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC--c
Confidence 999999999999999999996 66666662 33333 7888899999999999999999999999999999 5777 8
Q ss_pred EEEEecCCcccCC
Q 000316 317 LYICDKPLVGFNS 329 (1678)
Q Consensus 317 lKL~DFGlA~~~~ 329 (1678)
++|+|||.++...
T Consensus 455 lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 455 LRLTYFGFWSELE 467 (612)
T ss_pred EEEEEechhhhCc
Confidence 9999999998544
|
|
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-27 Score=279.04 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=127.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||.|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~~--~~~~~~--------~e~~~l~~l~h~~iv~~ 81 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDV------ATGQEVAIKQINLQKQP--KKELII--------NEILVMKELKNPNIVNF 81 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEc------CCCcEEEEEEEecccCc--hHHHHH--------HHHHHHHhcCCCceeee
Confidence 567999999999999999999864 46789999998653222 222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+...+.+|+||||+++ +|..++. ...+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~--~~kl 156 (296)
T cd06655 82 LDSFLVGDELFVVMEYLAGGSLTDVVT---ETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG--SVKL 156 (296)
T ss_pred eeeEecCceEEEEEEecCCCcHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999985 9999887 33589999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 157 ~dfg~~~~ 164 (296)
T cd06655 157 TDFGFCAQ 164 (296)
T ss_pred ccCccchh
Confidence 99999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=288.32 Aligned_cols=143 Identities=17% Similarity=0.224 Sum_probs=122.6
Q ss_pred eeeeee--CcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEE
Q 000316 168 AFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~ 245 (1678)
..||+| +||+||+|++. .++..||+|++..........+.+. +|+.+++.++||||++++++|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHT------PTGTLVTVRITDLENCTEEHLKALQ--------NEVVLSHFFRHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEEc------CCCcEEEEEEeccccCCHHHHHHHH--------HHHHHHHhCCCCCcceEeeeEe
Confidence 456766 99999999964 5789999999876544433333333 8999999999999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++..++||||+++ +|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|++|||.
T Consensus 70 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~--~~~~~~~~~ 147 (328)
T cd08226 70 TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDG--LVSLSGLSH 147 (328)
T ss_pred cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCC--cEEEechHH
Confidence 99999999999995 999999854445689999999999999999999999999999999999999988 899999976
Q ss_pred cc
Q 000316 325 VG 326 (1678)
Q Consensus 325 A~ 326 (1678)
+.
T Consensus 148 ~~ 149 (328)
T cd08226 148 LY 149 (328)
T ss_pred Hh
Confidence 54
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=286.89 Aligned_cols=149 Identities=25% Similarity=0.387 Sum_probs=127.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
..++|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.+ +||||+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~ni~ 70 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDR------RTKEVVALKKIFDAFRNATDAQRTF--------REIMFLQELGDHPNIV 70 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEc------CCCeEEEEEeeccccCcchhhhhhh--------HHHHHHHHhcCCCCcc
Confidence 4678999999999999999999864 4678899998865322222222333 899999999 999999
Q ss_pred ceeeEEEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 239 PVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 239 ~l~~~~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
++++++... ..+|+||||++++|.+++.. . .+++..++.++.||+.||.|||++||+||||||+||+++.++ .
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~--~ 145 (337)
T cd07852 71 KLLNVIKAENDKDIYLVFEYMETDLHAVIRA--N-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC--R 145 (337)
T ss_pred ceeeeeccCCCceEEEEecccccCHHHHHhc--C-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 999998754 36899999999999999872 2 678888999999999999999999999999999999999999 8
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 146 ~kl~d~g~~~~ 156 (337)
T cd07852 146 VKLADFGLARS 156 (337)
T ss_pred EEEeeccchhc
Confidence 99999999874
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-26 Score=303.25 Aligned_cols=277 Identities=15% Similarity=0.232 Sum_probs=219.9
Q ss_pred cccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCCc---------eeEEeccccccEEEEEEecC-CCEEEEE
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---------ILSSIRAHHGALRSVAVGQD-ECTVFTA 1345 (1678)
Q Consensus 1278 ~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~~---------~l~tl~gH~~~V~svafspd-g~~LaSg 1345 (1678)
.+.+|++.|++ |+|+|.+ +|+||.|++|+||+.... ....+. +...|.+++|++. +.+|++|
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~-----latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~ 551 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEF-----FATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASS 551 (793)
T ss_pred cccCCCCcEEEEEECCCCCE-----EEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEE
Confidence 34568999986 9999987 999999999999997521 233344 3568999999875 6889999
Q ss_pred ecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecC-CCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCC
Q 000316 1346 GIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1678)
Q Consensus 1346 S~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~-~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~ 1422 (1678)
+. ||+|++||+.+++.+..+.+|.+.|++++|++ ++..++ +.|++|++||++++.++..+..+
T Consensus 552 ~~----Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~---------- 617 (793)
T PLN00181 552 NF----EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK---------- 617 (793)
T ss_pred eC----CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC----------
Confidence 86 99999999999999999999999999999997 456664 44999999999998887666421
Q ss_pred CCCccccccccccccccCCCCCCeEEeeecCCceeEeEee-cCCCEEEEEECCCcEEEEECCCCe-eeEEeeCCCCcccC
Q 000316 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHI-ECVERLVVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGF 1500 (1678)
Q Consensus 1423 s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~s-p~g~~Lasgs~DgtVrlWDl~tg~-~l~~l~~~~~~v~~ 1500 (1678)
.. +.++.++ +++..+++|+.||+|++||+++++ .+..+.+ |
T Consensus 618 ---------------------~~----------v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~------h 660 (793)
T PLN00181 618 ---------------------AN----------ICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIG------H 660 (793)
T ss_pred ---------------------CC----------eEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecC------C
Confidence 11 3444453 468899999999999999998765 4555554 4
Q ss_pred CCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC------CcEEEEEeccCCCeEEEE-cCCCCEEEEEeC
Q 000316 1501 PSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS------GNVIASWRAHDGYVTKLA-APEDHLLVSSSL 1573 (1678)
Q Consensus 1501 ~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t------g~~i~~l~gH~~~V~sva-spdg~~LaSgS~ 1573 (1678)
...|.+++|. ++.++++|+.|++|++||+++ ++++..+.+|...++.+. ++++++|++|+.
T Consensus 661 ~~~V~~v~f~------------~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~ 728 (793)
T PLN00181 661 SKTVSYVRFV------------DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSE 728 (793)
T ss_pred CCCEEEEEEe------------CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 4567888873 346899999999999999985 367889999999999999 899999999999
Q ss_pred CCcEEEEEcCCCCCCCCe-----------EeecCCCCEE--EEEecCCEEEEEeCCC-eEEEec
Q 000316 1574 DKTLRIWDLRRNWPSQPT-----------VFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1574 DgtI~IWDl~~~~~~~~~-----------~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
|++|++|+.....+...+ ....|...|. +|++++..|++|+.|+ |+||++
T Consensus 729 D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 729 TNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 999999998654211111 1233445577 4899999999999999 999996
|
|
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-27 Score=279.74 Aligned_cols=150 Identities=20% Similarity=0.190 Sum_probs=128.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++ .++..||+|.++...........+. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~~i~~~ 71 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDK------DTGELVALKKVRLDNEKEGFPITAI--------REIKILRQLNHRNIVNL 71 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEEC------CCCcEEEEEEEeecccccCchHHHH--------HHHHHHHhCCCCCeeee
Confidence 678999999999999999999964 4678899999875432222222222 89999999999999999
Q ss_pred eeEEEeCC----------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec
Q 000316 241 LGLLKTSG----------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1678)
Q Consensus 241 ~~~~~~~~----------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 310 (1678)
++++.+.. .+++||||+++++.+.+.. ....+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~ 150 (302)
T cd07864 72 KEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLES-GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN 150 (302)
T ss_pred eheecCcchhhhccccCCcEEEEEcccCccHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 99987655 7999999999988888873 344689999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCccc
Q 000316 311 DSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~ 327 (1678)
+++ .+||+|||+++.
T Consensus 151 ~~~--~~kl~dfg~~~~ 165 (302)
T cd07864 151 NKG--QIKLADFGLARL 165 (302)
T ss_pred CCC--cEEeCccccccc
Confidence 999 899999999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-28 Score=291.82 Aligned_cols=209 Identities=19% Similarity=0.204 Sum_probs=167.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.+++++.||+|.||+|++|..+ ....||+|.++...... ..|+ +|+++|++|+|+|||++++
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~-------~~~~vavk~ik~~~m~~---~~f~--------~Ea~iMk~L~H~~lV~l~g 268 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWN-------GSTKVAVKTIKEGSMSP---EAFL--------REAQIMKKLRHEKLVKLYG 268 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEc-------CCCcccceEEeccccCh---hHHH--------HHHHHHHhCcccCeEEEEE
Confidence 5778999999999999999953 33478999997754333 3455 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++.+|||||||+ |+|.++|+...+..+...+...++.|||+|++||+++++|||||...|||++++. .+||+|
T Consensus 269 V~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--~vKIsD 346 (468)
T KOG0197|consen 269 VCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--VVKISD 346 (468)
T ss_pred EEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--eEEEcc
Confidence 9999889999999999 8999999975677899999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC-CCCCcC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTF 400 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs-~~dl~q 400 (1678)
|||||...........+. .-...|.|||.+....++.++|+|++|.+. +|..+. ||. |..+++
T Consensus 347 FGLAr~~~d~~Y~~~~~~----------kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL-~E~fT~-----G~~py~~msn 410 (468)
T KOG0197|consen 347 FGLARLIGDDEYTASEGG----------KFPIKWTAPEALNYGKFSSKSDVWSFGVLL-WELFTY-----GRVPYPGMSN 410 (468)
T ss_pred cccccccCCCceeecCCC----------CCCceecCHHHHhhCCcccccceeehhhhH-HHHhcc-----CCCCCCCCCH
Confidence 999995443222211111 124569999999999999999999999664 333333 554 344444
Q ss_pred CcccceE
Q 000316 401 HMVMPWV 407 (1678)
Q Consensus 401 ~pv~pwv 407 (1678)
.-|+.-|
T Consensus 411 ~ev~~~l 417 (468)
T KOG0197|consen 411 EEVLELL 417 (468)
T ss_pred HHHHHHH
Confidence 4444333
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-27 Score=276.19 Aligned_cols=149 Identities=17% Similarity=0.169 Sum_probs=125.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
..++|++++.||+|+||.||+|++. .++..+|+|.+...... ..++. +|+.+++.+ +||||+
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~~i~ 78 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNK------KNGSKAAVKILDPIHDI---DEEIE--------AEYNILKALSDHPNVV 78 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEEC------CCCceeEEEeeccccch---HHHHH--------HHHHHHHHHhcCCCee
Confidence 4678999999999999999999964 46788999987542211 12233 799999999 699999
Q ss_pred ceeeEEE-----eCCeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec
Q 000316 239 PVLGLLK-----TSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1678)
Q Consensus 239 ~l~~~~~-----~~~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 310 (1678)
++++++. .++.+++||||++| +|.+++.. .....+++..++.++.|++.||.|||+++|+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 158 (286)
T cd06638 79 KFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT 158 (286)
T ss_pred eeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC
Confidence 9999884 34579999999985 99998763 2345688999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCccc
Q 000316 311 DSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~ 327 (1678)
.++ .+||+|||+++.
T Consensus 159 ~~~--~~kl~dfg~~~~ 173 (286)
T cd06638 159 TEG--GVKLVDFGVSAQ 173 (286)
T ss_pred CCC--CEEEccCCceee
Confidence 999 899999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-27 Score=271.46 Aligned_cols=150 Identities=17% Similarity=0.128 Sum_probs=128.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++.++ .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~~~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAK------SDSEHCVIKEIDLTKMPVKEKEASK--------KEVILLAKMKHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEc------CCCceEEEEEeeHhhccchhhHHHH--------HHHHHHHhCCCCChhhhhh
Confidence 5899999999999999999965 4678899999876433333333333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+...+..++|+||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||++++++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~~~l~d 145 (257)
T cd08225 67 SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM-VAKLGD 145 (257)
T ss_pred eeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC-eEEecc
Confidence 99999999999999985 9999998544556899999999999999999999999999999999999998862 579999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||.+..
T Consensus 146 ~~~~~~ 151 (257)
T cd08225 146 FGIARQ 151 (257)
T ss_pred cccchh
Confidence 998863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=275.20 Aligned_cols=148 Identities=20% Similarity=0.247 Sum_probs=125.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|.+. .+++.+|+|.+...... ...+. +|+.+++.+ +||||++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~ni~~ 83 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNK------KDGSLAAVKILDPISDV---DEEIE--------AEYNILQSLPNHPNVVK 83 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEEC------CCCCEEEEEEecccccH---HHHHH--------HHHHHHHHhcCCCCeEE
Confidence 568999999999999999999964 46889999998653211 12222 789999988 8999999
Q ss_pred eeeEEEeC-----CeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 240 VLGLLKTS-----GLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 240 l~~~~~~~-----~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
+++++... +..|+||||++| +|.++++. .....+++..++.++.|++.||+|||++||+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~ 163 (291)
T cd06639 84 FYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC
Confidence 99998754 368999999985 99998863 23456899999999999999999999999999999999999999
Q ss_pred CCceeEEEEecCCccc
Q 000316 312 SCWSWLYICDKPLVGF 327 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~ 327 (1678)
++ .+||+|||+++.
T Consensus 164 ~~--~~kl~dfg~~~~ 177 (291)
T cd06639 164 EG--GVKLVDFGVSAQ 177 (291)
T ss_pred CC--CEEEeecccchh
Confidence 98 899999999874
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=293.42 Aligned_cols=203 Identities=17% Similarity=0.205 Sum_probs=162.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|+++ .++..+|+|.+.+.........+.+. +|+.+++.++||||+++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHK------STRKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEC------CCCcEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhCCCCCCCeE
Confidence 578999999999999999999965 57889999998653222222222232 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++.+|+||||++| +|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~--~ikL 183 (371)
T cd05622 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (371)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999984 99999873 3578999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccc----ccccccccccCccchhhhHhhhccccC
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~----y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
+|||+++........ . .....||+.|||||++.+.. |+.++|+|+.|++. |++++...++.+
T Consensus 184 ~DfG~a~~~~~~~~~----~------~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvil-yell~G~~Pf~~ 249 (371)
T cd05622 184 ADFGTCMKMNKEGMV----R------CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFL-YEMLVGDTPFYA 249 (371)
T ss_pred EeCCceeEcCcCCcc----c------ccCcccCccccCHHHHhccCCCccCCCccceeehhHHH-HHHHhCCCCCCC
Confidence 999999854321100 0 11234899999999987543 78899999999665 555544444443
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=277.83 Aligned_cols=150 Identities=18% Similarity=0.157 Sum_probs=129.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...|++.+.||+|+||.||+|.+. .++..||+|.+........ ...++. +|+.+++.++||||++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~niv~ 79 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQQLRHPNTIE 79 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEc------CCCcEEEEEEEeccccCcHHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 456999999999999999999964 4678999999865433322 223343 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++.+++..|+||||++|++.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~-~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~--~~kL 156 (307)
T cd06607 80 YKGCYLREHTAWLVMEYCLGSASDILEV-HKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG--TVKL 156 (307)
T ss_pred EEEEEEeCCeEEEEHHhhCCCHHHHHHH-cccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC--CEEE
Confidence 9999999999999999999999888864 344689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 157 ~dfg~~~~ 164 (307)
T cd06607 157 ADFGSASL 164 (307)
T ss_pred eecCccee
Confidence 99998863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=291.10 Aligned_cols=201 Identities=15% Similarity=0.171 Sum_probs=162.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|++. .++..||+|++.+...........+. +|+.+|..++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDK------DTGQVYAMKVLRKSDMIKRNQIAHVR-------AERDILADADSPWIVKLY 67 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEEC------CCCCEEEEEEEEHHHHhhccHHHHHH-------HHHHHHHhcCCCCccchh
Confidence 47999999999999999999965 46889999999764332222222232 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+|+||||++| +|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~--~~kL~ 143 (350)
T cd05573 68 YSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIKLA 143 (350)
T ss_pred hheecCCeEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEee
Confidence 999999999999999985 99999983 46789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccc------------------cCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTI------------------PTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~------------------~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++.......... ..............||+.|+|||++.+..++.++|+|+.|++.
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 220 (350)
T cd05573 144 DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVIL 220 (350)
T ss_pred cCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhh
Confidence 9999986442210000 0000000112234589999999999999999999999999664
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-27 Score=281.49 Aligned_cols=148 Identities=21% Similarity=0.341 Sum_probs=127.3
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||.||+|.+. .++..+|+|.+.+..........+. +|+.+++.++||||++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~ 73 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQ------LTGQNVAIKKIMKPFSTPVLAKRTY--------RELKLLKHLRHENIIS 73 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEEC------CCCCEEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCeee
Confidence 4678999999999999999999965 4788999998865322222223333 8999999999999999
Q ss_pred eeeEEEe-CCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKT-SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~-~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++++|.. ....|+||||++++|.++++ ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+|
T Consensus 74 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~--~~~ 148 (328)
T cd07856 74 LSDIFISPLEDIYFVTELLGTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DLK 148 (328)
T ss_pred EeeeEecCCCcEEEEeehhccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC--CEE
Confidence 9999976 55789999999889998887 34578888999999999999999999999999999999999998 899
Q ss_pred EEecCCcc
Q 000316 319 ICDKPLVG 326 (1678)
Q Consensus 319 L~DFGlA~ 326 (1678)
|+|||+++
T Consensus 149 l~dfg~~~ 156 (328)
T cd07856 149 ICDFGLAR 156 (328)
T ss_pred eCcccccc
Confidence 99999886
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=273.60 Aligned_cols=155 Identities=17% Similarity=0.134 Sum_probs=127.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|..+-. .....+..||+|.+.... .......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~-~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDI-IKGEAETRVAVKTVNESA-SLRERIEFL--------NEASVMKGFTCHHVVRL 74 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEecc-CCCCcceEEEEEECCCcC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999999975421 112346789999986532 222223343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
++++.+.+..|+||||++ |+|.++++... ....+...+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~ 154 (288)
T cd05061 75 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 154 (288)
T ss_pred EEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC
Confidence 999999999999999998 59999997421 123466788899999999999999999999999999999999
Q ss_pred CCceeEEEEecCCccc
Q 000316 312 SCWSWLYICDKPLVGF 327 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~ 327 (1678)
++ .+||+|||+++.
T Consensus 155 ~~--~~~L~Dfg~~~~ 168 (288)
T cd05061 155 DF--TVKIGDFGMTRD 168 (288)
T ss_pred CC--cEEECcCCcccc
Confidence 98 899999999873
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=271.00 Aligned_cols=151 Identities=21% Similarity=0.211 Sum_probs=126.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH----HHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE----SKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~----~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+......... .....+. ..+|+.+++.++||||+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~h~~i~ 71 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNV------TTGEMMAVKQVELPATIAGRHDSRQKDMVKA----LRSEIETLKDLDHLNIV 71 (272)
T ss_pred ceeecceecccCceEEEEEeec------CCCceeeeeeeechhhhhcccchHHHHHHHH----HHHHHHHHHhcCCCCcc
Confidence 5889999999999999999854 46789999988642211111 1111110 11899999999999999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++++...+..++||||++| +|.++++. ...+++..++.++.||+.||.|||++|++||||||+||+++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--~~ 147 (272)
T cd06629 72 QYLGFETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--IC 147 (272)
T ss_pred eEEEEeccCCceEEEEecCCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC--eE
Confidence 999999999999999999985 99999983 46789999999999999999999999999999999999999998 89
Q ss_pred EEEecCCccc
Q 000316 318 YICDKPLVGF 327 (1678)
Q Consensus 318 KL~DFGlA~~ 327 (1678)
||+|||+++.
T Consensus 148 ~l~d~~~~~~ 157 (272)
T cd06629 148 KISDFGISKK 157 (272)
T ss_pred EEeecccccc
Confidence 9999999863
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-27 Score=273.19 Aligned_cols=147 Identities=16% Similarity=0.203 Sum_probs=128.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||.|+||.||+|.+. .++..+|+|.+.... .......+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDK------RTNQVVAIKVIDLEE-AEDEIEDIQ--------QEIQFLSQCRSPYITKYY 65 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEEC------CCCeEEEEEEeeccc-cchHHHHHH--------HHHHHHHHcCCCCeeeee
Confidence 46899999999999999999964 468899999987542 222233333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.++..+|+|+||+++ +|.+++.. ..+++..++.++.|++.||.|||+++|+||||||+||++++++ .++|+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~ 140 (274)
T cd06609 66 GSFLKGSKLWIIMEYCGGGSCLDLLKP---GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG--DVKLA 140 (274)
T ss_pred EEEEECCeEEEEEEeeCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEc
Confidence 999999999999999985 99999983 2789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccC
Q 000316 321 DKPLVGFN 328 (1678)
Q Consensus 321 DFGlA~~~ 328 (1678)
|||+++..
T Consensus 141 d~g~~~~~ 148 (274)
T cd06609 141 DFGVSGQL 148 (274)
T ss_pred ccccceee
Confidence 99998743
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-27 Score=275.24 Aligned_cols=142 Identities=16% Similarity=0.100 Sum_probs=122.4
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
||+|+||+||+|.+. .+++.+|+|.+.+....... ...+. +|+++|+.++||||+++++++...+
T Consensus 1 lg~g~~g~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~~ 66 (277)
T cd05577 1 LGKGGFGEVCACQVK------ATGKMYACKKLDKKRLKKRKGEQMAL--------NEKKILEKVSSRFIVSLAYAFETKD 66 (277)
T ss_pred CCCCCceeEEEEEEc------CCCcEEEEEEEehhhhhhhhhhHHHH--------HHHHHHHhCCCCCEeeeeeEEecCC
Confidence 699999999999864 46889999998754322222 22223 8999999999999999999999999
Q ss_pred eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
..|+||||++| +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~~ 144 (277)
T cd05577 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG--NVRISDLGLAVE 144 (277)
T ss_pred eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEccCcchhh
Confidence 99999999995 999999854445789999999999999999999999999999999999999999 899999998863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-27 Score=272.02 Aligned_cols=147 Identities=21% Similarity=0.257 Sum_probs=129.5
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+|++.+.||.|+||.||+|.+. .++..+|+|.+.+..... ...+.+. +|+++++.++||||++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKR------DTKKMFAMKYMNKQKCVEKGSVRNVL--------NERRILQELNHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEc------cCCcEEEEEEEehhhhcchhHHHHHH--------HHHHHHHhCCCCChHHHH
Confidence 5899999999999999999964 467889999997644333 2333443 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.++...++||||+.| +|.+++.. ...+++..+..++.||++||.|||++||+|+||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~l~ 142 (258)
T cd05578 67 YSFQDEENMYLVVDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHIT 142 (258)
T ss_pred HhhcCCCeEEEEEeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC--CEEEe
Confidence 999999999999999986 99999983 35789999999999999999999999999999999999999999 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 143 d~~~~~~ 149 (258)
T cd05578 143 DFNIATK 149 (258)
T ss_pred ecccccc
Confidence 9998863
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-27 Score=273.87 Aligned_cols=147 Identities=19% Similarity=0.242 Sum_probs=129.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|+..+.||+|+||.||+|.++ .++..+|+|.+..... .....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~-~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHR------PTGKIMAVKTIRLEIN-EAIQKQIL--------RELDILHKCNSPYIVGFY 65 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEc------CCCcEEEEEEEecccC-hHHHHHHH--------HHHHHHHHCCCCchhhhh
Confidence 36888999999999999999965 4678999999876432 23334444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+.+..+..+++||||++ ++|.+++...+ ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~--~~~l 142 (265)
T cd06605 66 GAFYNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG--QIKL 142 (265)
T ss_pred eeeecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC--CEEE
Confidence 99999999999999999 59999998432 678999999999999999999999 9999999999999999998 8999
Q ss_pred EecCCcc
Q 000316 320 CDKPLVG 326 (1678)
Q Consensus 320 ~DFGlA~ 326 (1678)
+|||.+.
T Consensus 143 ~d~g~~~ 149 (265)
T cd06605 143 CDFGVSG 149 (265)
T ss_pred eecccch
Confidence 9999886
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=270.94 Aligned_cols=148 Identities=17% Similarity=0.219 Sum_probs=127.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|.++ .++..+++|.+..... ...++. +|+.+++.+ +||||++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHK------KTGQLVAIKIMDIIED---EEEEIK--------EEYNILRKYSNHPNIAT 67 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEEC------CCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHhcCCCChhe
Confidence 578999999999999999999964 3578899999865322 223333 899999999 7999999
Q ss_pred eeeEEEeCC------eEEEeccCCCC-CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEec
Q 000316 240 VLGLLKTSG------LITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g-~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~ 310 (1678)
+++++.... .+|+||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||||+|+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~ 147 (275)
T cd06608 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT 147 (275)
T ss_pred EEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc
Confidence 999997644 58999999995 9999987433 46789999999999999999999999999999999999999
Q ss_pred CCCceeEEEEecCCccc
Q 000316 311 DSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~ 327 (1678)
.++ .+||+|||++..
T Consensus 148 ~~~--~~~l~d~~~~~~ 162 (275)
T cd06608 148 KNA--EVKLVDFGVSAQ 162 (275)
T ss_pred cCC--eEEECCCcccee
Confidence 998 899999999874
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=270.17 Aligned_cols=147 Identities=20% Similarity=0.170 Sum_probs=125.7
Q ss_pred cCCCCccccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhh
Q 000316 150 NHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVP 229 (1678)
Q Consensus 150 ~~~~~~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL 229 (1678)
-|+.+++-.....+|.+.++||-|-|++||+|.|. ...+.||+|+.+...... .+++.||++|
T Consensus 66 YHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDt------q~~r~VAlKVvKSAqhYt-----------EaAlDEIklL 128 (590)
T KOG1290|consen 66 YHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDT------QNKRYVALKVVKSAQHYT-----------EAALDEIKLL 128 (590)
T ss_pred CceeeccccccCceEEEEEeccccccceeEEEeec------cCCeEEEEEEEehhhHHH-----------HHHHHHHHHH
Confidence 35666666666789999999999999999999976 577899999986532222 2455999999
Q ss_pred ccCC-----C---CcccceeeEEEeC----CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CC
Q 000316 230 GCLR-----H---PNVAPVLGLLKTS----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LG 296 (1678)
Q Consensus 230 ~~l~-----H---pNIV~l~~~~~~~----~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~g 296 (1678)
++++ | ..||+|++.|... .++|||+|++..+|..+|.+...+.++...++.|++||+.||.|||. .|
T Consensus 129 ~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg 208 (590)
T KOG1290|consen 129 QQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG 208 (590)
T ss_pred HHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9984 3 3699999999864 48999999999999999998888889999999999999999999998 69
Q ss_pred ceecCCCCCCeEecCCC
Q 000316 297 IAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 297 IiHRDLKP~NILl~~~g 313 (1678)
|||-||||+|||+..+.
T Consensus 209 IIHTDlKPENvLl~~~e 225 (590)
T KOG1290|consen 209 IIHTDLKPENVLLCSTE 225 (590)
T ss_pred ccccCCCcceeeeeccc
Confidence 99999999999998764
|
|
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-26 Score=267.37 Aligned_cols=147 Identities=18% Similarity=0.216 Sum_probs=127.3
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcC---hHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
+|+..+.||+|+||.||+|.+. .++..+++|.+...... .+....+. +|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~ 66 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNL------DDGDFFAVKEVSLADDGQTGQEAVKQLE--------QEIALLSKLQHPNIVQ 66 (258)
T ss_pred CccccceeeecCCceEEEEEEc------CCCcEEEEEEEEEccccccchHHHHHHH--------HHHHHHHhcCCCCchh
Confidence 4788899999999999999864 46788999998654322 12223333 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++.++..+|+||||++| +|.+++. +...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--~~k 142 (258)
T cd06632 67 YLGTEREEDNLYIFLELVPGGSLAKLLK--KYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVK 142 (258)
T ss_pred eeeeEecCCeEEEEEEecCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEE
Confidence 99999999999999999995 9999998 345688999999999999999999999999999999999999998 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 143 l~d~~~~~~ 151 (258)
T cd06632 143 LADFGMAKQ 151 (258)
T ss_pred EccCcccee
Confidence 999999874
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-26 Score=273.65 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=117.9
Q ss_pred eeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
.||+|+||.||+|++. .+++.||+|.+.+....... ...+... ..++..++...||||+++++++.+.
T Consensus 1 ~ig~g~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~ 69 (278)
T cd05606 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNE-----RIMLSLVSTGDCPFIVCMSYAFHTP 69 (278)
T ss_pred CcccCCCeEEEEEEEe------cCCCEEEEEEeeccccccchhHHHHHHH-----HHHHHHHHhCCCCcEeeeeeeeecC
Confidence 4899999999999864 46789999998764332211 1112210 0234455566899999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
+..|+||||++| +|.+++. ....+++..++.++.|++.||.|||+++|+||||||+||+++.++ .+||+|||+++
T Consensus 70 ~~~~~v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~--~~kl~dfg~~~ 145 (278)
T cd05606 70 DKLSFILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLAC 145 (278)
T ss_pred CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC--CEEEccCcCcc
Confidence 999999999995 9998887 456789999999999999999999999999999999999999998 89999999986
Q ss_pred c
Q 000316 327 F 327 (1678)
Q Consensus 327 ~ 327 (1678)
.
T Consensus 146 ~ 146 (278)
T cd05606 146 D 146 (278)
T ss_pred c
Confidence 3
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-26 Score=268.65 Aligned_cols=146 Identities=18% Similarity=0.213 Sum_probs=128.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|... .++..+++|.+..... ..++. +|+++++.++||||+++
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~----~~~~~--------~e~~~~~~l~~~~i~~~ 63 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHK------ETGQVVAIKVVPVEED----LQEII--------KEISILKQCDSPYIVKY 63 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEc------CCCcEEEEEEeecHHH----HHHHH--------HHHHHHHhCCCCcEeee
Confidence 357999999999999999999964 3578899999865321 33343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+.++..+|+++||+++ +|.+++.. ....+++..++.++.|++.||.|||+.||+||||+|+||+++.++ .+||
T Consensus 64 ~~~~~~~~~~~l~~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~--~~~l 140 (256)
T cd06612 64 YGSYFKNTDLWIVMEYCGAGSVSDIMKI-TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKL 140 (256)
T ss_pred eeeeecCCcEEEEEecCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC--cEEE
Confidence 9999999999999999995 99999973 345689999999999999999999999999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 141 ~dfg~~~~ 148 (256)
T cd06612 141 ADFGVSGQ 148 (256)
T ss_pred cccccchh
Confidence 99999874
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-26 Score=266.68 Aligned_cols=149 Identities=18% Similarity=0.213 Sum_probs=128.1
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++++.||.|+||.||+|.+. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRK------SDGKILVWKEIDYGNMTEKEKQQLV--------SEVNILRELKHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeec------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHHhcCCCccceeee
Confidence 5899999999999999999865 4678899999876544444444444 8999999999999999999
Q ss_pred EEEe--CCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCceecCCCCCCeEecCC
Q 000316 243 LLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLH-----SLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 243 ~~~~--~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH-----~~gIiHRDLKP~NILl~~~ 312 (1678)
.+.. +...+++|||+++ +|.+++... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.+
T Consensus 67 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~ 146 (265)
T cd08217 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN 146 (265)
T ss_pred eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence 8864 4578999999985 999999742 2456899999999999999999999 9999999999999999999
Q ss_pred CceeEEEEecCCccc
Q 000316 313 CWSWLYICDKPLVGF 327 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~ 327 (1678)
+ .+||+|||+++.
T Consensus 147 ~--~~kl~d~g~~~~ 159 (265)
T cd08217 147 N--NVKLGDFGLAKI 159 (265)
T ss_pred C--CEEEeccccccc
Confidence 8 899999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=272.44 Aligned_cols=148 Identities=24% Similarity=0.246 Sum_probs=124.7
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC---CCCcccce
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAPV 240 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l---~HpNIV~l 240 (1678)
|++.+.||+|+||.||+|+++ .++..+|+|.+............+. +|+.+++.+ +||||+++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~~i~~~ 66 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDL------NTGRFVALKKVRVPLSEEGIPLSTL--------REIALLKQLESFEHPNIVRL 66 (287)
T ss_pred CeEEEEecccCceEEEEEEEC------CCCCEEEEEEeccccccchhhhhHH--------HHHHHHHHhhccCCCCcceE
Confidence 688999999999999999964 3578899999975433222122222 677766655 69999999
Q ss_pred eeEEEeCCe-----EEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 241 LGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 241 ~~~~~~~~~-----~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
++++...+. ++++|||++++|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~-- 144 (287)
T cd07838 67 LDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG-- 144 (287)
T ss_pred EEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC--
Confidence 999998776 9999999999999998854445689999999999999999999999999999999999999998
Q ss_pred eEEEEecCCccc
Q 000316 316 WLYICDKPLVGF 327 (1678)
Q Consensus 316 ~lKL~DFGlA~~ 327 (1678)
.+||+|||+++.
T Consensus 145 ~~~l~dfg~~~~ 156 (287)
T cd07838 145 QVKIADFGLARI 156 (287)
T ss_pred CEEEeccCccee
Confidence 899999998863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=285.31 Aligned_cols=192 Identities=15% Similarity=0.100 Sum_probs=157.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||++++. .++..||+|.+.+.........+.++ +|+.++..++|+||++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~l~ 67 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMK------HTERIYAMKILNKWEMLKRAETACFR-------EERNVLVNGDCQWITTLH 67 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHhhHHHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 47999999999999999999965 46788999998753222222222232 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++..|+||||++| +|.+++.. ....+++..++.++.|++.||+|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--~~kl~ 144 (331)
T cd05624 68 YAFQDENYLYLVMDYYVGGDLLTLLSK-FEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--HIRLA 144 (331)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC--CEEEE
Confidence 999999999999999984 99999984 245689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc-----ccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~y~~~~d~W~~G~is 379 (1678)
|||+++........ ......||+.|||||++.+ ..++.++|+|+.|++.
T Consensus 145 DfG~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil 198 (331)
T cd05624 145 DFGSCLKMNQDGTV----------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCM 198 (331)
T ss_pred eccceeeccCCCce----------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhh
Confidence 99999754321100 0111247899999998875 4678899999999664
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-26 Score=254.02 Aligned_cols=291 Identities=16% Similarity=0.197 Sum_probs=241.8
Q ss_pred ccccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCC
Q 000316 1275 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1678)
Q Consensus 1275 ~~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~ 1351 (1678)
+.-.+.||++.|.+ ||.||.+ ||||+-+|.|+||+.. +.....+.+--+.|-.+.|+|.+..|+.|+.
T Consensus 98 ~~~eltgHKDSVt~~~Fshdgtl-----LATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~---- 168 (399)
T KOG0296|consen 98 FAGELTGHKDSVTCCSFSHDGTL-----LATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGST---- 168 (399)
T ss_pred ceeEecCCCCceEEEEEccCceE-----EEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecC----
Confidence 67789999999996 9999998 9999999999999988 6667777667788999999999999999998
Q ss_pred CCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccc
Q 000316 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429 (1678)
Q Consensus 1352 DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~ 1429 (1678)
||.|.+|.+.++...+.+.||..++++=.|.|+|+++ +..||+|++||+.+|+++..+.....
T Consensus 169 DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~--------------- 233 (399)
T KOG0296|consen 169 DGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEG--------------- 233 (399)
T ss_pred CCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEeccccc---------------
Confidence 9999999999988888999999999999999999998 44599999999999999887764210
Q ss_pred ccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCC--CcccCCCcceEE
Q 000316 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEP--TELGFPSLVSAI 1507 (1678)
Q Consensus 1430 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~--~~v~~~~~V~sv 1507 (1678)
...+|+.++..+..++.|+.++.+++-...+|+.+....+.. ........+.||
T Consensus 234 ------------------------~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esv 289 (399)
T KOG0296|consen 234 ------------------------LELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESV 289 (399)
T ss_pred ------------------------CcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhh
Confidence 113455666678899999999999999999999887776411 111233445555
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCC
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWP 1587 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~ 1587 (1678)
.+.+..+ .=.+.|+|+-||+|.|||+.+.+....+. |..+|+.+.+-+..+|++++.||+|++||.++|
T Consensus 290 e~~~~ss--------~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~t~~l~t~c~~g~v~~wDaRtG-- 358 (399)
T KOG0296|consen 290 ESIPSSS--------KLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLNTDYLLTACANGKVRQWDARTG-- 358 (399)
T ss_pred hhccccc--------ccchhhcccccceEEEEecccchhheecc-CCCceEEEEEcCcchheeeccCceEEeeecccc--
Confidence 5443221 22578999999999999999887777666 889999999444789999999999999999999
Q ss_pred CCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecC
Q 000316 1588 SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1588 ~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
..+.++.||...|.+ ++|++++++|+|+|+ .+||.+.
T Consensus 359 ~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 359 QLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 778899999999995 899999999999999 9999863
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-26 Score=267.66 Aligned_cols=143 Identities=22% Similarity=0.262 Sum_probs=121.0
Q ss_pred EeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEE
Q 000316 166 PIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 166 ~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~ 245 (1678)
....||+|+||.||+|++. .++..+|+|.+... .......+. +|+.+++.++||||+++++++.
T Consensus 12 ~~~~lg~g~~g~v~~~~~~------~~~~~v~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~ 75 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDL------STQVRIAIKEIPER--DSRYVQPLH--------EEIALHSYLKHRNIVQYLGSDS 75 (268)
T ss_pred ceEEEecCCceEEEEeEec------CCCcEEEEEEecCC--CHHHHHHHH--------HHHHHHHhcCCCCeeeeeeeec
Confidence 3468999999999999864 46788999988653 222333343 8999999999999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC-CCceeEEEEe
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYICD 321 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l--~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-~g~~~lKL~D 321 (1678)
.++..++||||+++ +|.+++... ...+ ++..+..++.||+.||+|||++||+||||||+||+++. ++ .+||+|
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~--~~~l~d 152 (268)
T cd06624 76 ENGFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG--VVKISD 152 (268)
T ss_pred cCCEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--eEEEec
Confidence 99999999999985 999999842 2334 78888999999999999999999999999999999986 55 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||++..
T Consensus 153 fg~~~~ 158 (268)
T cd06624 153 FGTSKR 158 (268)
T ss_pred chhhee
Confidence 999863
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-26 Score=245.59 Aligned_cols=287 Identities=18% Similarity=0.263 Sum_probs=219.7
Q ss_pred eccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEEC
Q 000316 1323 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNS 1400 (1678)
Q Consensus 1323 l~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~ 1400 (1678)
++||..+++.|.++.+|.+|+||+. |.++.||-..+|+.+.++.||++.|++|+..-+...+ +|.|.++++||+
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaK----D~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv 81 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAK----DSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDV 81 (327)
T ss_pred cccCccccceEEecCCCcEEEEecC----CCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEc
Confidence 6899999999999999999999998 9999999999999999999999999999988777777 677999999999
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECC-----C
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN-----G 1475 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~D-----g 1475 (1678)
.+|+++.+++... . |..+.|+.+|++++.++.+ +
T Consensus 82 ~tGk~la~~k~~~-------------------------------~----------Vk~~~F~~~gn~~l~~tD~~mg~~~ 120 (327)
T KOG0643|consen 82 ETGKQLATWKTNS-------------------------------P----------VKRVDFSFGGNLILASTDKQMGYTC 120 (327)
T ss_pred CCCcEEEEeecCC-------------------------------e----------eEEEeeccCCcEEEEEehhhcCcce
Confidence 9999998887431 2 3344455567777766543 6
Q ss_pred cEEEEECCCC-------eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc-EE
Q 000316 1476 SLRFIDINQG-------QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-VI 1547 (1678)
Q Consensus 1476 tVrlWDl~tg-------~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~-~i 1547 (1678)
.|.++|++.. ++...+..+. +.++. .+|.+-+.+|++|.+||.|..||+++|+ .+
T Consensus 121 ~v~~fdi~~~~~~~~s~ep~~kI~t~~------skit~-----------a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v 183 (327)
T KOG0643|consen 121 FVSVFDIRDDSSDIDSEEPYLKIPTPD------SKITS-----------ALWGPLGETIIAGHEDGSISIYDARTGKELV 183 (327)
T ss_pred EEEEEEccCChhhhcccCceEEecCCc------cceee-----------eeecccCCEEEEecCCCcEEEEEcccCceee
Confidence 7999999843 3344443222 22333 3444677899999999999999999985 55
Q ss_pred EEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEec
Q 000316 1548 ASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1548 ~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
..-+-|...|+.+. +++..++++||.|.+-++||.++- ..+.++.. ..+|+ +++|....++.|+.-. --|-..
T Consensus 184 ~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl--~v~Kty~t-e~PvN~aaisP~~d~VilgGGqeA~dVTTT 260 (327)
T KOG0643|consen 184 DSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL--EVLKTYTT-ERPVNTAAISPLLDHVILGGGQEAMDVTTT 260 (327)
T ss_pred echhhhccccccccccCCcceEEecccCccceeeeccce--eeEEEeee-cccccceecccccceEEecCCceeeeeeee
Confidence 66678999999999 999999999999999999999986 44445543 45677 5999888888876433 444443
Q ss_pred CCCCCCCC-cceeccceeeeeecC--CCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1624 SKSADEDG-QHRLVPQKLYMVDNG--AKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1624 ~~~~~~~g-~~~~~~~kl~~~~~g--~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
+ ...| ........++...-| .+|-++|++++|+|+|+..++|++||.||+.
T Consensus 261 ~---~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 261 S---TRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred c---ccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEE
Confidence 3 1122 111112222222222 2799999999999999999999999999983
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=269.26 Aligned_cols=141 Identities=19% Similarity=0.259 Sum_probs=123.0
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCCe
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~~ 249 (1678)
||.|+||.||+|++. .++..+|+|.+.+.........+.+. +|+.+++.++||||+++++.+.++..
T Consensus 1 lg~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (262)
T cd05572 1 LGVGGFGRVELVKVK------SKNRTFALKCVKKRHIVETGQQEHIF-------SEKEILEECNHPFIVKLYRTFKDKKY 67 (262)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEEehhcchhhhHHHHHH-------HHHHHHHhCCCCCEeeeeeeEEcCCc
Confidence 799999999999964 36789999999765433333333332 89999999999999999999999999
Q ss_pred EEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 250 ~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
+|+||||+++ +|.+++. +...+++..++.++.||+.||.|||++|++|+||||+||+++.++ .+||+|||+++.
T Consensus 68 ~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~--~~~l~df~~~~~ 142 (262)
T cd05572 68 IYMLMEYCLGGELWTILR--DRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG--YVKLVDFGFAKK 142 (262)
T ss_pred cEEEEecCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC--CEEEeeCCcccc
Confidence 9999999985 9999998 345689999999999999999999999999999999999999998 899999999874
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=269.29 Aligned_cols=211 Identities=17% Similarity=0.210 Sum_probs=168.2
Q ss_pred CCCeeE-eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 161 MTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
.+-|++ .+.||+|+||.|--|.+ +.++..+|||++.+. ..+...+.+ ||++++..+ .|+||+
T Consensus 76 ~d~YkLt~e~LGeGAyasVqtcv~------i~t~~EYAVKiidKq--~gHsR~Rvf--------REVe~f~~Cqgh~nil 139 (463)
T KOG0607|consen 76 EDMYKLTSELLGEGAYASVQTCVS------IQTGKEYAVKIIDKQ--PGHSRSRVF--------REVETFYQCQGHKNIL 139 (463)
T ss_pred HHHHHhHHHHhcCccceeeeeeee------eccchhhhhhhhhcC--CchHHHHHH--------HHHHHHHHhcCCccHH
Confidence 344555 67899999999999984 368999999999874 444434443 999999999 599999
Q ss_pred ceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-ee
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 316 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-~~ 316 (1678)
+|+++|++++.+|||||.|.| .|...|. +.+.|+|.++..++++|+.||.|||.+||.||||||+|||-..... .-
T Consensus 140 qLiefFEdd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred HHHHHhcccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCc
Confidence 999999999999999999995 9999888 5778999999999999999999999999999999999999876443 46
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc-----cccccccccccccCccchhhhHhhhcccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----~~~y~~~~d~W~~G~isnfeyL~~ln~~a 391 (1678)
+|||||-++............+++. ..+.| |+..|||||+.. ...|++.+|.|+.|.|. |-+|..+.+|.
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~---L~tPv-GSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIl-YImLsGYpPFv 292 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPE---LLTPV-GSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVIL-YIMLSGYPPFV 292 (463)
T ss_pred eeeeccccccccccCCCCCCCCCcc---ccCcc-cchhhcchhHHhhhccccccccccccHHHHHHHH-HHHHhCCCCcc
Confidence 8999999987544333322223332 23333 678999999763 45699999999999886 66666667776
Q ss_pred CCC
Q 000316 392 GRR 394 (1678)
Q Consensus 392 GRs 394 (1678)
|+-
T Consensus 293 G~C 295 (463)
T KOG0607|consen 293 GHC 295 (463)
T ss_pred Ccc
Confidence 654
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-27 Score=272.89 Aligned_cols=279 Identities=15% Similarity=0.248 Sum_probs=225.3
Q ss_pred cccccCCCCceEe--ecC-CCCCCCCCeEEEEeCCCCEEEEeCC--CceeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1276 TSNLMKCEPWFWF--PTP-AASWDGPDFLGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSp-dg~~~~~~~LasgS~D~~v~lWd~~--~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
..++.||+.-|.+ |.| .+.+ |++||.|+.|+||++- +.+++++.||..+|.+++|+.+|..++|+|
T Consensus 207 ~~~~~gH~kgvsai~~fp~~~hL-----lLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~s---- 277 (503)
T KOG0282|consen 207 SHNLSGHTKGVSAIQWFPKKGHL-----LLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSAS---- 277 (503)
T ss_pred eeeccCCccccchhhhccceeeE-----EEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeee----
Confidence 5678899999987 666 6665 9999999999999976 789999999999999999999999999999
Q ss_pred CCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE---EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l---aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
||++|++||++||+++..+. -...+++|.|+|++..+ +..|+.|+.||+++|+.++.+..|-
T Consensus 278 fD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hL-------------- 342 (503)
T KOG0282|consen 278 FDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHL-------------- 342 (503)
T ss_pred cceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhh--------------
Confidence 69999999999999999886 45677999999998543 4449999999999999887777542
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sv 1507 (1678)
+.|..+.| -++|..+++.+.|+++++|+.+.+-.+....... .....|+
T Consensus 343 ----------------g~i~~i~F----------~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~-----~hsmP~~ 391 (503)
T KOG0282|consen 343 ----------------GAILDITF----------VDEGRRFISSSDDKSVRIWENRIPVPIKNIADPE-----MHTMPCL 391 (503)
T ss_pred ----------------hheeeeEE----------ccCCceEeeeccCccEEEEEcCCCccchhhcchh-----hccCcce
Confidence 23444444 4569999999999999999998876654332111 1112233
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCC---cEEEEEeccCC--CeEEEE-cCCCCEEEEEeCCCcEEEEE
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG---NVIASWRAHDG--YVTKLA-APEDHLLVSSSLDKTLRIWD 1581 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg---~~i~~l~gH~~--~V~sva-spdg~~LaSgS~DgtI~IWD 1581 (1678)
+..|+++++++=+.|+.|.++.+... ..-+.++||.- .-..|. +|||++|+||+.||.+.+||
T Consensus 392 -----------~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wd 460 (503)
T KOG0282|consen 392 -----------TLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWD 460 (503)
T ss_pred -----------ecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEee
Confidence 33477789999999999999987643 33456788864 344555 99999999999999999999
Q ss_pred cCCCCCCCCeEeecCCCCEEE--EEecC-CEEEEEeCCC-eEEEe
Q 000316 1582 LRRNWPSQPTVFKGHTNGISG--FSVWG-QDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1582 l~~~~~~~~~~l~gH~~~V~a--fSpdg-~~LaSgs~D~-I~vwd 1622 (1678)
.++. +.+..++.|...+.. |.|.. ..||||+.|| |++|+
T Consensus 461 wkt~--kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 461 WKTT--KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred chhh--hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 9987 566789999888884 77764 5689999999 99996
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-26 Score=273.19 Aligned_cols=149 Identities=17% Similarity=0.177 Sum_probs=128.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
.+.|...++||+|+||.||+|++. .++..+++|.+......... ...+. +|+.+++.++||||++
T Consensus 20 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 85 (313)
T cd06633 20 EEIFVGLHEIGHGSFGAVYFATNS------HTNEVVAVKKMSYSGKQTNEKWQDII--------KEVKFLQQLKHPNTIE 85 (313)
T ss_pred HHHhhcceeeccCCCeEEEEEEEC------CCCcEEEEEEEeccccCchHHHHHHH--------HHHHHHHhCCCCCCcc
Confidence 445788899999999999999864 46789999998754332222 23333 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++.+....|+||||+.|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~--~~kL 162 (313)
T cd06633 86 YKGCYLKEHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVKL 162 (313)
T ss_pred EEEEEEeCCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC--CEEE
Confidence 9999999999999999999999888874 345688999999999999999999999999999999999999998 8999
Q ss_pred EecCCcc
Q 000316 320 CDKPLVG 326 (1678)
Q Consensus 320 ~DFGlA~ 326 (1678)
+|||++.
T Consensus 163 ~dfg~~~ 169 (313)
T cd06633 163 ADFGSAS 169 (313)
T ss_pred eecCCCc
Confidence 9999875
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-26 Score=270.16 Aligned_cols=147 Identities=26% Similarity=0.300 Sum_probs=128.0
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNK------KTGELVALKKIRMENEKEGFPITAI--------REIKLLQKLRHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEEC------CCCeEEEEEEEecccccccchHHHH--------HHHHHHHhccCCCeeeheee
Confidence 688999999999999999964 4578999999986532222223333 89999999999999999999
Q ss_pred EEeC--CeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 244 LKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 244 ~~~~--~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+... +..++||||++++|.+++.. ....+++..++.++.||+.||+|||++|++|+||||+||++++++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~--~~~l~d 143 (287)
T cd07840 67 VTSKGKGSIYMVFEYMDHDLTGLLDS-PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG--VLKLAD 143 (287)
T ss_pred EecCCCCcEEEEeccccccHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC--CEEEcc
Confidence 9988 89999999999999999873 235789999999999999999999999999999999999999999 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 144 ~g~~~~ 149 (287)
T cd07840 144 FGLARP 149 (287)
T ss_pred ccceee
Confidence 999874
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=276.68 Aligned_cols=143 Identities=18% Similarity=0.167 Sum_probs=123.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|.....||+|+||.||+|.+. .++..||+|.+...... ....+. +|+.+++.++||||+++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~--~~~~~~--------~e~~~l~~l~hp~i~~~~~ 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREK------HSGRQVAVKMMDLRKQQ--RRELLF--------NEVVIMRDYQHQNVVEMYK 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEc------CCCCEEEEEEEEecccc--hHHHHH--------HHHHHHHhCCCCchhhhhh
Confidence 3455668999999999999864 46788999998653222 222333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+..++..|+||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~~~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~--~~kL~d 160 (297)
T cd06659 86 SYLVGEELWVLMEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG--RVKLSD 160 (297)
T ss_pred heeeCCeEEEEEecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC--cEEEee
Confidence 99999999999999995 8988776 34588999999999999999999999999999999999999999 899999
Q ss_pred cCCcc
Q 000316 322 KPLVG 326 (1678)
Q Consensus 322 FGlA~ 326 (1678)
||+++
T Consensus 161 fg~~~ 165 (297)
T cd06659 161 FGFCA 165 (297)
T ss_pred chhHh
Confidence 99986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.4e-26 Score=264.47 Aligned_cols=147 Identities=23% Similarity=0.255 Sum_probs=129.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++.+. .++..+++|.+............+. +|+.+++.++|+||+++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNL------DTGELMAVKEIRIQDNDPKTIKEIA--------DEMKVLELLKHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEEC------CCCcEEEEEEEECcccchHHHHHHH--------HHHHHHHhCCCCChhheee
Confidence 5899999999999999999854 4678999999976544322333443 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+.+.+.+++|+||+++ +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~kl~d 142 (264)
T cd06626 67 VEVHREKVYIFMEYCSGGTLEELLE--HGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGD 142 (264)
T ss_pred eEecCCEEEEEEecCCCCcHHHHHh--hcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999995 9999998 345678999999999999999999999999999999999999988 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||++..
T Consensus 143 ~g~~~~ 148 (264)
T cd06626 143 FGCAVK 148 (264)
T ss_pred cccccc
Confidence 999874
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=268.05 Aligned_cols=351 Identities=16% Similarity=0.198 Sum_probs=253.2
Q ss_pred CceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeC
Q 000316 1284 PWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL 1360 (1678)
Q Consensus 1284 ~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl 1360 (1678)
..|.+ .++|... ||.|=.||.|++|+.. +..+-++.||..+|+++.|...|..|+|||. |+.|.+||+
T Consensus 66 ~evt~l~~~~d~l~-----lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGsk----Dt~IIvwDl 136 (888)
T KOG0306|consen 66 AEVTCLRSSDDILL-----LAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSK----DTDIIVWDL 136 (888)
T ss_pred ceEEEeeccCCcce-----EEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCC----CccEEEEEe
Confidence 35555 3355554 9999999999999988 6788899999999999999999999999998 999999999
Q ss_pred CCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCCCceeEEecccCcccc---------------------
Q 000316 1361 TRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSL--------------------- 1417 (1678)
Q Consensus 1361 ~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~--------------------- 1417 (1678)
-...-+..++||.+.|+..-|..+...++|+ |++||+||+.+..|..+.-.|.....
T Consensus 137 V~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~dse~~v~ 216 (888)
T KOG0306|consen 137 VGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTDSELKVW 216 (888)
T ss_pred ccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecCCceEEE
Confidence 8777788899999999999987766666443 99999999998776555433211100
Q ss_pred ---------------------------------ccCCCCCCcccccccc--------------------------cccc-
Q 000316 1418 ---------------------------------HGGSPSSSISKINTDQ--------------------------VGML- 1437 (1678)
Q Consensus 1418 ---------------------------------~~~s~s~~~~~~~~~~--------------------------~~~~- 1437 (1678)
....++....+..+.+ ....
T Consensus 217 ~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t 296 (888)
T KOG0306|consen 217 ELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAET 296 (888)
T ss_pred EeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccc
Confidence 0000000000000000 0000
Q ss_pred -----c-------------cCCCCCCeE-------------------------E----------------ee--ecCCce
Q 000316 1438 -----N-------------SNTLSSGIL-------------------------S----------------TA--FDGNLY 1456 (1678)
Q Consensus 1438 -----~-------------~~~~s~~v~-------------------------s----------------v~--f~~~~v 1456 (1678)
. ....+..+. + +. .+..-|
T Consensus 297 ~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dV 376 (888)
T KOG0306|consen 297 EENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDV 376 (888)
T ss_pred cccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhhe
Confidence 0 000000000 1 11 122236
Q ss_pred eEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeE
Q 000316 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1678)
Q Consensus 1457 t~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I 1536 (1678)
..++++.+...+++|+ .+.+++|+..+.++++++.. ..+.+.+|+ |.++++++|..+|.+
T Consensus 377 Rsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~--------~y~l~~~Fv-----------pgd~~Iv~G~k~Gel 436 (888)
T KOG0306|consen 377 RSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITC--------GYILASKFV-----------PGDRYIVLGTKNGEL 436 (888)
T ss_pred eEEEeecCceeeeecC-CCcEEEEEccCcceeEEecc--------ccEEEEEec-----------CCCceEEEeccCCce
Confidence 7777777666666655 47899999999999999874 246666765 444799999999999
Q ss_pred EEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCC---CCCeEeecC-------CCCEEE--E
Q 000316 1537 RLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP---SQPTVFKGH-------TNGISG--F 1603 (1678)
Q Consensus 1537 ~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~---~~~~~l~gH-------~~~V~a--f 1603 (1678)
.+||+.+...+.+.++|++.+++++ .||+..+++||.|++|++||..-... .+...+.-+ .+.|.| +
T Consensus 437 ~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~ 516 (888)
T KOG0306|consen 437 QVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSV 516 (888)
T ss_pred EEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEE
Confidence 9999999999999999999999999 99999999999999999999642110 111112211 334553 9
Q ss_pred EecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1604 SVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1604 Spdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
||||++||.+=-|. ++||-+.. .+++-..- +|.=+|.+++.+||+++++|||.|.+|++|
T Consensus 517 Spdgk~LaVsLLdnTVkVyflDt------------lKFflsLY--GHkLPV~smDIS~DSklivTgSADKnVKiW 577 (888)
T KOG0306|consen 517 SPDGKLLAVSLLDNTVKVYFLDT------------LKFFLSLY--GHKLPVLSMDISPDSKLIVTGSADKNVKIW 577 (888)
T ss_pred cCCCcEEEEEeccCeEEEEEecc------------eeeeeeec--ccccceeEEeccCCcCeEEeccCCCceEEe
Confidence 99999999998777 99998751 13333333 489999999999999999999999999999
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-27 Score=283.68 Aligned_cols=192 Identities=14% Similarity=0.178 Sum_probs=159.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|+++ .++..||+|.+++.........+.+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~~~~i~~~~ 67 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREK------ATGDIYAMKVMKKSVLLAQETVSFFE-------EERDILSISNSPWIPQLQ 67 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCccee
Confidence 46999999999999999999965 46889999999764332232333333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+++.+|+||||++ |+|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--~~kL~ 144 (330)
T cd05601 68 YAFQDKDNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HIKLA 144 (330)
T ss_pred eEEecCCeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC--CEEec
Confidence 99999999999999998 4999999842 35689999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc------cccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ------SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~------~~~y~~~~d~W~~G~is 379 (1678)
|||+++........ ......||+.|+|||++. ...++.++|+|+.|+|.
T Consensus 145 Dfg~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 199 (330)
T cd05601 145 DFGSAARLTANKMV----------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIA 199 (330)
T ss_pred cCCCCeECCCCCce----------eeecccCCccccCHHHhccccccccCCCCCcceeeccccee
Confidence 99999854321110 011124788999999986 55678899999999664
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=276.07 Aligned_cols=145 Identities=19% Similarity=0.181 Sum_probs=124.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+.|.....||+|+||.||++.+. .++..||||.+.... ......+. +|+.+++.++||||++++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~ii~~~ 85 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEK------HTGKQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYHHENVVDMY 85 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEEC------CCCCEEEEEEEecch--HHHHHHHH--------HHHHHHHhCCCCcHHHHH
Confidence 45666788999999999999864 467889999986422 22222333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+.+...+..|+||||+++ +|.+++. ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kL~ 160 (292)
T cd06658 86 NSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG--RIKLS 160 (292)
T ss_pred HheecCCeEEEEEeCCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEc
Confidence 999999999999999996 8888876 34578999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 161 dfg~~~~ 167 (292)
T cd06658 161 DFGFCAQ 167 (292)
T ss_pred cCcchhh
Confidence 9999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=270.54 Aligned_cols=146 Identities=17% Similarity=0.202 Sum_probs=127.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
..|+.+++||.|+||.||+|.+. .++..+|+|.+.... .......+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDN------RTQQVVAIKIIDLEE-AEDEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEc------cCCEEEEEEEEeccc-cHHHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 45888999999999999999864 467889999987532 223333444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.++...|+||||++| +|.+++. ...+++..+..++.|++.||+|||+++++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~i~---~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~--~~~l~ 143 (277)
T cd06640 69 GSYLKGTKLWIIMEYLGGGSALDLLR---AGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC--CEEEc
Confidence 999999999999999985 9999987 34578999999999999999999999999999999999999998 89999
Q ss_pred ecCCccc
Q 000316 321 DKPLVGF 327 (1678)
Q Consensus 321 DFGlA~~ 327 (1678)
|||++..
T Consensus 144 dfg~~~~ 150 (277)
T cd06640 144 DFGVAGQ 150 (277)
T ss_pred cccccee
Confidence 9999863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=269.35 Aligned_cols=145 Identities=16% Similarity=0.281 Sum_probs=126.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC---CCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~---HpNIV~ 239 (1678)
.|++++.||+|+||.||+|.+. .++..+|+|.+.... ......++. +|+.+++.++ ||||++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~~~~vi~ 66 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHV------PTGRVVALKIINLDT-PDDDVSDIQ--------REVALLSQLRQSQPPNITK 66 (277)
T ss_pred hhhhhhheeccCCceEEEEEEc------CCCcEEEEEEecCCC-CchhHHHHH--------HHHHHHHHhccCCCCCeee
Confidence 4888999999999999999964 467899999986532 222333343 8999998886 999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++..+...|+||||++| +|.++++. ..+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~--~~~ 141 (277)
T cd06917 67 YYGSYLKGPRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG--NVK 141 (277)
T ss_pred EeeeeeeCCEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC--CEE
Confidence 99999999999999999985 99999872 3688999999999999999999999999999999999999988 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||++..
T Consensus 142 l~dfg~~~~ 150 (277)
T cd06917 142 LCDFGVAAL 150 (277)
T ss_pred EccCCceee
Confidence 999999874
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=272.62 Aligned_cols=147 Identities=17% Similarity=0.211 Sum_probs=128.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||++.+. .++..+|+|++.... .......+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHI------PTGTVMAKKVVHIGA-KSSVRKQIL--------RELQIMHECRSPYIVSF 68 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEc------CCCcEEEEEEEEecC-cchHHHHHH--------HHHHHHHHcCCCCcceE
Confidence 357999999999999999999964 467899999986532 222233444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++++...+.+++||||+++ +|.+++. ..+.++...++.++.|++.||.|||+ ++|+||||||+||+++.++ .++
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 144 (284)
T cd06620 69 YGAFLNENNICMCMEFMDCGSLDRIYK--KGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--QIK 144 (284)
T ss_pred eeeEecCCEEEEEEecCCCCCHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC--cEE
Confidence 9999999999999999995 9999887 34568999999999999999999997 6999999999999999998 899
Q ss_pred EEecCCcc
Q 000316 319 ICDKPLVG 326 (1678)
Q Consensus 319 L~DFGlA~ 326 (1678)
|+|||+++
T Consensus 145 l~d~gl~~ 152 (284)
T cd06620 145 LCDFGVSG 152 (284)
T ss_pred EccCCccc
Confidence 99999876
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-26 Score=268.46 Aligned_cols=148 Identities=19% Similarity=0.248 Sum_probs=126.3
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|+..+.||.|++|.||+|.+. .++..+|+|.+..... .....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 65 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLK------NTGMIFALKTITTDPN-PDLQKQIL--------RELEINKSCKSPYIVKYY 65 (287)
T ss_pred CceEEEEEeccCCceEEEEEEEC------CCCeEEEEEEEecCCc-hHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 46899999999999999999975 3678899999875422 22333444 899999999999999999
Q ss_pred eEEEeC--CeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 242 GLLKTS--GLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 242 ~~~~~~--~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
++|.+. +.+|+||||++| +|.+++.. .....+++..+..++.||+.||.|||+.|++||||+|+||+++.++ .
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~--~ 143 (287)
T cd06621 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG--Q 143 (287)
T ss_pred eEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC--e
Confidence 998654 478999999985 99888753 2345688999999999999999999999999999999999999998 8
Q ss_pred EEEEecCCcc
Q 000316 317 LYICDKPLVG 326 (1678)
Q Consensus 317 lKL~DFGlA~ 326 (1678)
+||+|||++.
T Consensus 144 ~~l~dfg~~~ 153 (287)
T cd06621 144 VKLCDFGVSG 153 (287)
T ss_pred EEEeeccccc
Confidence 9999999986
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=278.31 Aligned_cols=145 Identities=19% Similarity=0.198 Sum_probs=119.8
Q ss_pred eEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEE
Q 000316 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1678)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~ 244 (1678)
.+.+.+|.|+++.|+++. .++..+|+|++............+. +|+.+++.++||||++++++|
T Consensus 5 ~i~~~~~~~~~v~~~~~~--------~~~~~~avK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i~~~~~~~ 68 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHK--------PTNTLVAVKKINLDSCSKEDLKLLQ--------QEIITSRQLQHPNILPYVTSF 68 (314)
T ss_pred hhhHhhcCCceEEEEEec--------CCCCEEEEEEEeccccchhHHHHHH--------HHHHHHHhcCCcchhhhhhee
Confidence 344455555555555443 3688999999976533344334444 899999999999999999999
Q ss_pred EeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 245 KTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 245 ~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
...+..+++|||++ |+|.+++.......+++..++.+++|++.||+|||++||+||||||+||+++.++ .+||+|||
T Consensus 69 ~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~--~~kl~d~~ 146 (314)
T cd08216 69 IVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG--KVVLSGLR 146 (314)
T ss_pred ecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC--ceEEecCc
Confidence 99999999999999 5999999854455689999999999999999999999999999999999999998 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
.+..
T Consensus 147 ~~~~ 150 (314)
T cd08216 147 YSVS 150 (314)
T ss_pred ccee
Confidence 8863
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=269.19 Aligned_cols=143 Identities=18% Similarity=0.152 Sum_probs=117.5
Q ss_pred CCCeeEeeee--eeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcc
Q 000316 161 MTALFPIAFI--GICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1678)
Q Consensus 161 ~~~y~~~~~I--G~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNI 237 (1678)
.++|++.+.+ |+|+||.||++.++ .++..+|+|.+....... .|+.....+ +||||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~---------------~e~~~~~~~~~h~~i 71 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHK------PTQKLFVQKIIKAKNFNA---------------IEPMVHQLMKDNPNF 71 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEc------CCCcEEEEEEEehhhcch---------------hhHHHHHHhhcCCCE
Confidence 3456666666 99999999999965 467889999986532211 122222222 69999
Q ss_pred cceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++++.|...+..|+||||++ ++|.+++.. ...+++..++.++.|+++||.|||++||+||||||+||+++.++ ..
T Consensus 72 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~-~~ 148 (267)
T PHA03390 72 IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAK-DR 148 (267)
T ss_pred EEEEEEEecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCC-Ce
Confidence 999999999999999999998 499999983 34789999999999999999999999999999999999999876 37
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 149 ~~l~dfg~~~~ 159 (267)
T PHA03390 149 IYLCDYGLCKI 159 (267)
T ss_pred EEEecCcccee
Confidence 99999998863
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-28 Score=283.98 Aligned_cols=182 Identities=16% Similarity=0.183 Sum_probs=156.8
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccC-CcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.|.-++.||.|+||.||-|++. .+..+||||++... +...+...+.+ +|+.+|+.++|||+|.+.
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~------~n~evVAIKKMsySGKQs~EKWqDIl--------KEVrFL~~l~HPntieYk 92 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDIL--------KEVRFLRQLRHPNTIEYK 92 (948)
T ss_pred HHHHHHHhcCCccceeEEeecc------CccceeeeeeccccccccHHHHHHHH--------HHHHHHHhccCCCccccc
Confidence 5778999999999999999976 57889999998753 33333344444 999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++|..+...|+|||||-|+-.|++.- ..+++-+-++..|..+.+.||+|||+.+.||||||..|||+++.| .|||+|
T Consensus 93 gCyLre~TaWLVMEYClGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g--~VKLaD 169 (948)
T KOG0577|consen 93 GCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG--LVKLAD 169 (948)
T ss_pred ceeeccchHHHHHHHHhccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC--eeeecc
Confidence 99999999999999999977777764 356788999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccc---cccccccccccccC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRG 376 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~y~~~~d~W~~G 376 (1678)
||.|..... ...++|||+|||||++. ...|+.++|+|+.|
T Consensus 170 FGSAsi~~P---------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLG 212 (948)
T KOG0577|consen 170 FGSASIMAP---------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 212 (948)
T ss_pred ccchhhcCc---------------hhcccCCccccchhHheeccccccCCccceeecc
Confidence 999875331 11246999999999875 56799999999999
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.7e-26 Score=266.93 Aligned_cols=280 Identities=18% Similarity=0.226 Sum_probs=240.3
Q ss_pred EEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEE
Q 000316 1321 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVW 1398 (1678)
Q Consensus 1321 ~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIW 1398 (1678)
+++..|++.|.+|.|+|....++++- |.|.|.||+.+|...++.+.-..-+|.+..|......+ +|.|..||||
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~L----ynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVf 82 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAAL----YNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVF 82 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEee----ecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEE
Confidence 45566999999999999999999887 58999999999999999999999999999998887777 6679999999
Q ss_pred ECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEE
Q 000316 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1678)
Q Consensus 1399 D~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVr 1478 (1678)
+.+|++.+.+|..| ++.+.|++++|...+++++|.|-+||
T Consensus 83 nynt~ekV~~FeAH----------------------------------------~DyIR~iavHPt~P~vLtsSDDm~iK 122 (794)
T KOG0276|consen 83 NYNTGEKVKTFEAH----------------------------------------SDYIRSIAVHPTLPYVLTSSDDMTIK 122 (794)
T ss_pred ecccceeeEEeecc----------------------------------------ccceeeeeecCCCCeEEecCCccEEE
Confidence 99999999988865 34578888999999999999999999
Q ss_pred EEECCCC-eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCe
Q 000316 1479 FIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1557 (1678)
Q Consensus 1479 lWDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V 1557 (1678)
+||-..+ .+.+++.|| ...|.+|||.|. |.+.+|++|-|++|++|.+.+..+..+++||...|
T Consensus 123 lW~we~~wa~~qtfeGH------~HyVMqv~fnPk----------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGV 186 (794)
T KOG0276|consen 123 LWDWENEWACEQTFEGH------EHYVMQVAFNPK----------DPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGV 186 (794)
T ss_pred EeeccCceeeeeEEcCc------ceEEEEEEecCC----------CccceeeeeccccEEEEEcCCCCCceeeeccccCc
Confidence 9998764 677788865 556899999763 44899999999999999999999999999999999
Q ss_pred EEEE-cC--CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCC
Q 000316 1558 TKLA-AP--EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDG 1631 (1678)
Q Consensus 1558 ~sva-sp--dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1631 (1678)
++|. .+ |..+|+||+.|.+|+|||.++. .++.++.||+..|++ |.|.-..++|||.|| +++|+-..-
T Consensus 187 N~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk--~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty----- 259 (794)
T KOG0276|consen 187 NCVDYYTGGDKPYLISGADDLTIKVWDYQTK--SCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTY----- 259 (794)
T ss_pred ceEEeccCCCcceEEecCCCceEEEeecchH--HHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcce-----
Confidence 9999 43 3359999999999999999998 788999999999994 888889999999999 999995311
Q ss_pred cceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEE
Q 000316 1632 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1676 (1678)
Q Consensus 1632 ~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrI 1676 (1678)
...++.. -..+.|++|+-.+.++.+++|.++|.|.+
T Consensus 260 ----~lE~tLn-----~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 260 ----KLEKTLN-----YGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred ----ehhhhhh-----cCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 1111111 12457999999999999999999998754
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-28 Score=265.89 Aligned_cols=208 Identities=18% Similarity=0.179 Sum_probs=178.7
Q ss_pred cccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CC
Q 000316 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RH 234 (1678)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~H 234 (1678)
+..-...+|.++++||+|+|+.|.+++.+ .+.+++|+|++++.-..+.+..++++ .|..+.... +|
T Consensus 244 ~~~l~l~df~ll~vigrgsyakvl~~~~~------~t~qiyamkvvkkel~nddedidwvq-------tek~vfe~asn~ 310 (593)
T KOG0695|consen 244 SQGLGLQDFDLLRVIGRGSYAKVLLVRLK------KTDQIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNN 310 (593)
T ss_pred ccccccccceeeeeecCcchhhhhheehc------ccceeeehhhHHHHhcCCcccchhHH-------hhHHHHHhccCC
Confidence 33344679999999999999999999965 57899999999987666666666765 777777666 79
Q ss_pred CcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 235 PNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 235 pNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
|.+|.|+.+|+++..+++|.||++| +|.-.++ +...++++++++|..+|+.||.|||++|||.||||.+|+|++..|
T Consensus 311 pflvglhscfqtesrlffvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg 388 (593)
T KOG0695|consen 311 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG 388 (593)
T ss_pred CeEEehhhhhcccceEEEEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC
Confidence 9999999999999999999999995 8887777 566799999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCC
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR 393 (1678)
++||+|+|+++....... +..+-| |||.|.|||++++..|+..+|.|..| ++..++.+||
T Consensus 389 --hikltdygmcke~l~~gd-----~tstfc------gtpnyiapeilrgeeygfsvdwwalg-------vlmfemmagr 448 (593)
T KOG0695|consen 389 --HIKLTDYGMCKEGLGPGD-----TTSTFC------GTPNYIAPEILRGEEYGFSVDWWALG-------VLMFEMMAGR 448 (593)
T ss_pred --ceeecccchhhcCCCCCc-----cccccc------CCCcccchhhhcccccCceehHHHHH-------HHHHHHHcCC
Confidence 999999999997553222 122223 79999999999999999999999999 6667888999
Q ss_pred CCCCC
Q 000316 394 RWGDY 398 (1678)
Q Consensus 394 s~~dl 398 (1678)
+..|+
T Consensus 449 spfdi 453 (593)
T KOG0695|consen 449 SPFDI 453 (593)
T ss_pred CCcce
Confidence 98774
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-26 Score=261.39 Aligned_cols=149 Identities=23% Similarity=0.222 Sum_probs=130.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++.+. .++..+++|.+.............. +|+++++.++|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK------SDGKLYVLKEIDLSNMSEKEREDAL--------NEVKILKKLNHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc------CCCcEEEEEEeecccCChHHHHHHH--------HHHHHHHhcCCCChhheEE
Confidence 5899999999999999999964 4678999999876544333334444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
.+...+..++||||+++ +|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--~~~l 144 (258)
T cd08215 67 SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKL 144 (258)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC--cEEE
Confidence 99999999999999996 9999998532 46789999999999999999999999999999999999999988 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 145 ~d~~~~~~ 152 (258)
T cd08215 145 GDFGISKV 152 (258)
T ss_pred CCccceee
Confidence 99999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=270.54 Aligned_cols=147 Identities=21% Similarity=0.198 Sum_probs=126.9
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccceee
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 242 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l~~ 242 (1678)
|++.+.||+|+||+||+|... .++..++||.+...... ....... +|+..++.++ ||||+++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~-~~~~~~~--------~e~~~l~~~~~h~~i~~~~~ 65 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNK------ETGELVAIKKMKKKFYS-WEECMNL--------REVKSLRKLNEHPNIVKLKE 65 (283)
T ss_pred CeeheeeccCCceEEEEEEEC------CCCcEEEEEEehhhccc-hhHHHHH--------HHHHHHHhccCCCCchhHHH
Confidence 678899999999999999964 35788999998653222 1111222 7999999999 999999999
Q ss_pred EEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
++.+++..++||||++|+|.+++.......+++..+..++.|++.||.|||++||+|+||||+||+++.++ .+||+||
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~--~~~l~d~ 143 (283)
T cd07830 66 VFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE--VVKIADF 143 (283)
T ss_pred HhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--CEEEeec
Confidence 99999999999999988999999854445789999999999999999999999999999999999999998 8999999
Q ss_pred CCccc
Q 000316 323 PLVGF 327 (1678)
Q Consensus 323 GlA~~ 327 (1678)
|+++.
T Consensus 144 ~~~~~ 148 (283)
T cd07830 144 GLARE 148 (283)
T ss_pred cccee
Confidence 99873
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=273.45 Aligned_cols=149 Identities=19% Similarity=0.255 Sum_probs=125.7
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l 240 (1678)
++|+..+.||+|+||.||++.+. .++..+|+|.+...... .....+. +|+.++.++. ||||+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~-~~~~~~~--------~e~~~l~~~~~~~~iv~~ 68 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHK------PSGTIMAVKRIRSTVDE-KEQKRLL--------MDLDVVMRSSDCPYIVKF 68 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEEC------CCCCEEEEEEehhccCh-HHHHHHH--------HHHHHHHHhcCCCCEeee
Confidence 46778899999999999999965 46789999998754322 2333344 8999999996 9999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCcee
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQF---SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~---~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
++++..+...+++|||+++++.++... .....+++..+..++.|++.||+|||+ .||+||||||+|||++.++ .
T Consensus 69 ~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~--~ 146 (288)
T cd06616 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG--N 146 (288)
T ss_pred eeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC--c
Confidence 999999999999999999876665432 234678999999999999999999998 4999999999999999998 8
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 147 ~kl~dfg~~~~ 157 (288)
T cd06616 147 IKLCDFGISGQ 157 (288)
T ss_pred EEEeecchhHH
Confidence 99999999874
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=284.73 Aligned_cols=187 Identities=17% Similarity=0.084 Sum_probs=157.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|... ....+..||+|.+..... .. +|+++|+.++|||||++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~----~~~~~~~v~vK~~~~~~~-------~~--------~E~~il~~l~h~~iv~~ 151 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKH----GDEQRKKVIVKAVTGGKT-------PG--------REIDILKTISHRAIINL 151 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEc----CCccceeEEEEecccccc-------HH--------HHHHHHHhcCCCCccce
Confidence 457999999999999999999743 124567899998864321 11 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++|.....+|+|||++.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 152 ~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~--~~~l~ 227 (392)
T PHA03207 152 IHAYRWKSTVCMVMPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE--NAVLG 227 (392)
T ss_pred eeeEeeCCEEEEEehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEc
Confidence 99999999999999999999999996 456789999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++........ . ......||+.|+|||++....|+.++|+|+.|++.
T Consensus 228 DfG~a~~~~~~~~~-----~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 277 (392)
T PHA03207 228 DFGAACKLDAHPDT-----P----QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVL 277 (392)
T ss_pred cCccccccCccccc-----c----cccccccccCccCHhHhcCCCCCchhhHHHHHHHH
Confidence 99999754321110 0 01124589999999999999999999999999654
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-26 Score=272.69 Aligned_cols=149 Identities=16% Similarity=0.161 Sum_probs=128.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...|+..+.||+|+||.||++++. .++..+|+|.+....... ....++. +|+++++.++||||++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~ 89 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVKFLQRIKHPNSIE 89 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEc------CCCcEEEEEEEecCCCCchHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 345889999999999999999964 467899999987543322 2223343 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++.++...++||||++|+|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 90 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~-~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~--~~kl 166 (317)
T cd06635 90 YKGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVKL 166 (317)
T ss_pred EEEEEeeCCeEEEEEeCCCCCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC--CEEE
Confidence 9999999999999999999999888863 345689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcc
Q 000316 320 CDKPLVG 326 (1678)
Q Consensus 320 ~DFGlA~ 326 (1678)
+|||++.
T Consensus 167 ~dfg~~~ 173 (317)
T cd06635 167 ADFGSAS 173 (317)
T ss_pred ecCCCcc
Confidence 9999876
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-27 Score=280.40 Aligned_cols=187 Identities=20% Similarity=0.227 Sum_probs=152.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHH-hhccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~-iL~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||+||+|+++ .+++.||+|++.+...... ...+++ +|.. +++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~~~~~l~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHK------ADGKFYAVKVLQKKAILKKKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhhCCCCCCCCeeEEEE
Confidence 47999999999999965 5788999999875432221 222333 4544 568899999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--~~kl~Dfg~ 142 (323)
T cd05575 67 TADKLYFVLDYVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (323)
T ss_pred eCCEEEEEEcCCCCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeccCC
Confidence 99999999999995 9999987 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhH
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL 384 (1678)
++....... . .....||+.|+|||++.+..|+.++|+|+.|++. |+++
T Consensus 143 ~~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~ell 190 (323)
T cd05575 143 CKEGIEHSK-----T------TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVL-YEML 190 (323)
T ss_pred CcccccCCC-----c------cccccCChhhcChhhhcCCCCCccccccccchhh-hhhh
Confidence 975321110 0 1122378999999999999999999999999665 4444
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-26 Score=270.71 Aligned_cols=147 Identities=22% Similarity=0.262 Sum_probs=128.2
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++.+.||+|++|.||+|.+. .++..+++|.+............+. +|+.+|+.++||||++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDK------LTGEIVAIKKIKLRFESEGIPKTAL--------REIKLLKELNHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcC------CCCcEEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCcchHHHh
Confidence 677899999999999999964 4688899999876433322233333 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
+.+++.+++||||++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l~df~ 143 (283)
T cd05118 67 FRHKGDLYLVFEFMDTDLYKLIKD-RQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG--VLKLADFG 143 (283)
T ss_pred hccCCCEEEEEeccCCCHHHHHHh-hcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC--cEEEeeee
Confidence 999999999999999999998884 235789999999999999999999999999999999999999988 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
.+..
T Consensus 144 ~~~~ 147 (283)
T cd05118 144 LARS 147 (283)
T ss_pred eeEe
Confidence 8863
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-27 Score=280.60 Aligned_cols=183 Identities=20% Similarity=0.215 Sum_probs=150.3
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHH-HhhccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei-~iL~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|++. .++..||+|++.+...... ...++. +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRK------SDGSFYAVKVLQKKTILKKKEQNHIM--------AERNVLLKNLKHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH--------HHHHHHHHhCCCCCccceeeEEE
Confidence 47999999999999965 4688999999875432221 222333 455 4678899999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+..|+||||++| +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~ 142 (321)
T cd05603 67 TAEKLYFVLDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (321)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999995 9988887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
++...... .. .....||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 143 ~~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 186 (321)
T cd05603 143 CKEGVEPE-----ET------TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVL 186 (321)
T ss_pred CccCCCCC-----Cc------cccccCCcccCCHHHhcCCCCCCcCcccccchhh
Confidence 87532111 00 1122378999999999999999999999999664
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=268.39 Aligned_cols=151 Identities=22% Similarity=0.243 Sum_probs=130.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.+. .++..+|+|++.+.........+.+. +|+.+++.++ ||||+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~-------~e~~~~~~l~~~~~i~~~ 67 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEK------ETNKEYAIKILDKRQLIKEKKVKYVK-------IEKEVLTRLNGHPGIIKL 67 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEc------CCCCEEEEEEechHhccchHHHHHHH-------HHHHHHHhcccCCCchhH
Confidence 36999999999999999999964 47889999998764333222222222 8999999998 9999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++..++||||++ ++|.+++. ....+++..+..++.|++.||.|||++|++|+||||+||+++.++ .++|
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~--~~~l 143 (280)
T cd05581 68 YYTFQDEENLYFVLEYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM--HIKI 143 (280)
T ss_pred HHHhcCCceEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEe
Confidence 999999999999999996 59999998 345789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCC
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlA~~~~ 329 (1678)
+|||++....
T Consensus 144 ~df~~~~~~~ 153 (280)
T cd05581 144 TDFGTAKVLD 153 (280)
T ss_pred cCCccccccC
Confidence 9999998543
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-26 Score=280.53 Aligned_cols=187 Identities=20% Similarity=0.217 Sum_probs=152.4
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHH-hhccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~-iL~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||+||+|++. .++..+|+|++.+..... ....++. +|.. +++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRK------LDGKCYAVKVLQKKIVLNRKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHHhCCCCCCccEEEEEe
Confidence 46999999999999965 578899999987542222 2222333 5554 578899999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++.+|+||||++| +|..++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--~~kL~DfG~ 142 (325)
T cd05604 67 TTEKLYFVLDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGL 142 (325)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEeecCC
Confidence 99999999999995 9988887 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhH
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL 384 (1678)
++....... . .....||+.|||||++.+..|+.++|+|+.|++. |+++
T Consensus 143 ~~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il-~el~ 190 (325)
T cd05604 143 CKEGIAQSD-----T------TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVL-YEML 190 (325)
T ss_pred cccCCCCCC-----C------cccccCChhhCCHHHHcCCCCCCcCcccccccee-hhhh
Confidence 975321110 0 1123478999999999999999999999999765 4443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=267.02 Aligned_cols=145 Identities=18% Similarity=0.193 Sum_probs=126.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|++++.||+|+||.||+|.+. .++..+|+|.+..... ......+. +|+.+++.++||||+++++
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~------~~~~~~aiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~~ 69 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDN------RTQKVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYVTKYYG 69 (277)
T ss_pred hhhhheeEeecCCeEEEEEEEC------CCCcEEEEEEeccccc-hHHHHHHH--------HHHHHHHhcCCCCEeEEEE
Confidence 4788999999999999999864 4678999999865322 22223333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++..|+||||+++ +|.+++. ...++...+..++.|++.|+.|||++||+|+||||+||+++.++ .++|+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~l~~~i~---~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~--~~~l~d 144 (277)
T cd06641 70 SYLKDTKLWIIMEYLGGGSALDLLE---PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLAD 144 (277)
T ss_pred EEEeCCeEEEEEEeCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC--CEEEee
Confidence 99999999999999995 9998887 34578999999999999999999999999999999999999998 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 145 fg~~~~ 150 (277)
T cd06641 145 FGVAGQ 150 (277)
T ss_pred ccccee
Confidence 999863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-26 Score=265.37 Aligned_cols=141 Identities=15% Similarity=0.130 Sum_probs=117.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHh-hccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSV-PGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~i-L~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||.||+|.+. .++..+|+|.+.+...... ...... .|..+ ....+||||+++++++.
T Consensus 2 ~~l~~g~~~~v~~a~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~e~~~~~~~~~~~~i~~~~~~~~ 67 (260)
T cd05611 2 KPISKGAFGSVYLAKKR------STGDYFAIKVLKKSDMIAKNQVTNVK--------AERAIMMIQGESPYVAKLYYSFQ 67 (260)
T ss_pred ccCCcCCCeeEEEEEec------CCCCeEEEEEecchhhhHHHHHHHHH--------HHHHHHhhcCCCCCeeeeeeeEE
Confidence 67999999999999964 4678999999865432221 112222 45444 45558999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
.++.+|+||||++| +|.+++. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg~ 143 (260)
T cd05611 68 SKDYLYLVMEYLNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG--HLKLTDFGL 143 (260)
T ss_pred cCCeEEEEEeccCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cEEEeeccc
Confidence 99999999999985 9999998 345689999999999999999999999999999999999999998 899999998
Q ss_pred cc
Q 000316 325 VG 326 (1678)
Q Consensus 325 A~ 326 (1678)
++
T Consensus 144 ~~ 145 (260)
T cd05611 144 SR 145 (260)
T ss_pred ce
Confidence 86
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=280.83 Aligned_cols=255 Identities=20% Similarity=0.371 Sum_probs=220.1
Q ss_pred EEEEeCCCCEEEEeCC-CceeEE-eccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEE
Q 000316 1301 LGRVGGLKDESPWKIK-ASILSS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~-~~~l~t-l~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~s 1378 (1678)
+.+++.|.++++||.. +..+.+ +.||.+.|+++++..-+.++++||. |.|+|+||..+|+|..++.||...|.+
T Consensus 221 ~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~----D~t~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 221 FKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGST----DKTERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred EEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEec----CCcEEeEecCCCcEEEEecCCCceEEE
Confidence 8999999999999987 667776 9999999999999988889999998 999999999999999999999999999
Q ss_pred EeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCce
Q 000316 1379 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1678)
Q Consensus 1379 V~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~v 1456 (1678)
+... ...+ +|.|.+|++|++.+++++.++.+|. +.|.++..+
T Consensus 297 ~~~~--~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~------------------------------~~V~~v~~~---- 340 (537)
T KOG0274|consen 297 LTID--PFLLVSGSRDNTVKVWDVTNGACLNLLRGHT------------------------------GPVNCVQLD---- 340 (537)
T ss_pred EEcc--CceEeeccCCceEEEEeccCcceEEEecccc------------------------------ccEEEEEec----
Confidence 9863 3334 4579999999999999999887542 334444433
Q ss_pred eEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeE
Q 000316 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1678)
Q Consensus 1457 t~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I 1536 (1678)
+..+++|+.|++|++||++++++++++.+|. ..|.++.+.+. +.+++|+.|++|
T Consensus 341 --------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~------~~V~sl~~~~~------------~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 341 --------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHT------GRVYSLIVDSE------------NRLLSGSLDTTI 394 (537)
T ss_pred --------CCEEEEEecCceEEEEEhhhceeeeeecCCc------ceEEEEEecCc------------ceEEeeeeccce
Confidence 6699999999999999999999999999765 45777765321 589999999999
Q ss_pred EEEeCCCC-cEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeec-CCCCEEEEEecCCEEEEEe
Q 000316 1537 RLFDVRSG-NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG-HTNGISGFSVWGQDVISIS 1614 (1678)
Q Consensus 1537 ~lWD~~tg-~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g-H~~~V~afSpdg~~LaSgs 1614 (1678)
++||+++. +++.++.+|...|.++. ..++.|+|++.|++|++||..++ .++.++.+ |...|.++......+++++
T Consensus 395 kvWdl~~~~~c~~tl~~h~~~v~~l~-~~~~~Lvs~~aD~~Ik~WD~~~~--~~~~~~~~~~~~~v~~l~~~~~~il~s~ 471 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTSLVSSLL-LRDNFLVSSSADGTIKLWDAEEG--ECLRTLEGRHVGGVSALALGKEEILCSS 471 (537)
T ss_pred EeecCCchhhhhhhhcCCcccccccc-cccceeEeccccccEEEeecccC--ceeeeeccCCcccEEEeecCcceEEEEe
Confidence 99999999 99999999999887665 45679999999999999999998 77788888 7889998887767888888
Q ss_pred CCC-eEEEecC
Q 000316 1615 NNK-IGLSSLS 1624 (1678)
Q Consensus 1615 ~D~-I~vwdl~ 1624 (1678)
.|+ +++||+.
T Consensus 472 ~~~~~~l~dl~ 482 (537)
T KOG0274|consen 472 DDGSVKLWDLR 482 (537)
T ss_pred cCCeeEEEecc
Confidence 888 9999986
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-26 Score=263.40 Aligned_cols=147 Identities=20% Similarity=0.249 Sum_probs=129.7
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|.+. .++..+++|++...... .....+. +|+..++.++||||++++
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~vk~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHK------PTGKIYALKKIHVDGDE-EFRKQLL--------RELKTLRSCESPYVVKCY 65 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEc------CCCcEEEEEEeccCcch-HHHHHHH--------HHHHHHHhcCCCCeeeEE
Confidence 36899999999999999999965 46889999998764322 2233444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++......++||||++ ++|.+++.. ...+++..+..++.|++.||.|||+ +|++||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~--~~~l 141 (264)
T cd06623 66 GAFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG--EVKI 141 (264)
T ss_pred EEEccCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC--CEEE
Confidence 99999999999999999 599999983 4678999999999999999999999 9999999999999999999 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 142 ~df~~~~~ 149 (264)
T cd06623 142 ADFGISKV 149 (264)
T ss_pred ccCcccee
Confidence 99998873
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=266.28 Aligned_cols=143 Identities=18% Similarity=0.198 Sum_probs=124.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
.|...+.||+|++|.||++.+. .++..+++|.+.... ......+. +|+.+++.++||||+++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~--~~~~~~~~--------~e~~~l~~~~h~~vv~~~~ 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDK------STGRQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHPNIVEMYS 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEEC------CCCCEEEEEEEeccc--hhHHHHHH--------HHHHHHHHcCCCChheEEE
Confidence 4666789999999999999864 457889999886422 12222333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++...+..++|+||++| +|.+++.. ..+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|
T Consensus 84 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~d 158 (285)
T cd06648 84 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG--RVKLSD 158 (285)
T ss_pred EEEcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC--cEEEcc
Confidence 99999999999999985 99999883 5688999999999999999999999999999999999999999 899999
Q ss_pred cCCcc
Q 000316 322 KPLVG 326 (1678)
Q Consensus 322 FGlA~ 326 (1678)
||+++
T Consensus 159 ~g~~~ 163 (285)
T cd06648 159 FGFCA 163 (285)
T ss_pred cccch
Confidence 99876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=268.50 Aligned_cols=147 Identities=23% Similarity=0.283 Sum_probs=128.2
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|+..+.||+|.||.||+|++. .++..+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDK------KTGEIVALKKIRLDNEEEGIPSTAL--------REISLLKELKHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeeec------CCCcEEEEEEeccccccccccHHHH--------HHHHHHHhcCCCCHHHHHhh
Confidence 677899999999999999964 4688999999976532222223333 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
+.+.+..++||||++++|.+++... ...+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~--~~~l~d~g 143 (282)
T cd07829 67 IHTERKLYLVFEYCDMDLKKYLDKR-PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG--VLKLADFG 143 (282)
T ss_pred hhcCCceEEEecCcCcCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC--CEEEecCC
Confidence 9999999999999999999999842 24689999999999999999999999999999999999999998 89999999
Q ss_pred Cccc
Q 000316 324 LVGF 327 (1678)
Q Consensus 324 lA~~ 327 (1678)
+++.
T Consensus 144 ~~~~ 147 (282)
T cd07829 144 LARA 147 (282)
T ss_pred cccc
Confidence 9873
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=279.87 Aligned_cols=188 Identities=14% Similarity=0.114 Sum_probs=155.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCC-CCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l 240 (1678)
+|+..+.||+|+||.||+|+++ .++..||+|++.+...... ....+. .|+.+++.+. |++|+++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALQDKPPFLTQL 66 (323)
T ss_pred CceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCchhhe
Confidence 4788999999999999999965 4788999999876432222 222233 7888888886 5788899
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~--~ikL 142 (323)
T cd05615 67 HSCFQTVDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred eeEEecCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEE
Confidence 9999999999999999984 9999987 456789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++....... . .....||+.|+|||++.+..++.++|+|+.|++.
T Consensus 143 ~Dfg~~~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 191 (323)
T cd05615 143 ADFGMCKEHMVDGV-----T------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLL 191 (323)
T ss_pred eccccccccCCCCc-----c------ccCccCCccccCHHHHcCCCCCCccchhhhHHHH
Confidence 99999985321110 0 1112378999999999999999999999999554
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=279.99 Aligned_cols=183 Identities=20% Similarity=0.209 Sum_probs=149.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHH-HhhccCCCCcccceeeEEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei-~iL~~l~HpNIV~l~~~~~ 245 (1678)
+.||+|+||+||+|++. .++..+|+|++.+..... ....+.. +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~Iv~~~~~~~ 66 (325)
T cd05602 1 KVIGKGSFGKVLLARHK------AEEKFYAVKVLQKKAILKKKEEKHIM--------SERNVLLKNVKHPFLVGLHFSFQ 66 (325)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHHhhhHHHHHH--------HHHHHHHHhCCCCCCCceeEEEE
Confidence 47999999999999965 467889999987532221 1222333 444 4578899999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--~~kl~DfG~ 142 (325)
T cd05602 67 TADKLYFVLDYINGGELFYHLQ--RERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGL 142 (325)
T ss_pred cCCeEEEEEeCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999995 9999998 456688999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
++....... . .....||+.|||||++.+..|+.++|+|+.|++.
T Consensus 143 a~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 186 (325)
T cd05602 143 CKENIEHNG-----T------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVL 186 (325)
T ss_pred CcccccCCC-----C------cccccCCccccCHHHHcCCCCCCccccccccHHH
Confidence 985331110 0 1123478999999999999999999999999664
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-26 Score=267.62 Aligned_cols=151 Identities=17% Similarity=0.152 Sum_probs=127.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccC-CCCcccce
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l 240 (1678)
+|++.+.||+|+||.||+|++.. ...++..||+|.+........ ...+... +|+++|+.+ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~---~~~~g~~~aiK~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~~i~~~ 70 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVS---GHDSGKLYAMKVLKKATIVQKAKTTEHTR-------TERQVLEHIRQSPFLVTL 70 (290)
T ss_pred CceeeeeeccCCcceEEEEEecc---CCCCCceEEEEEeehhhhhhcchHHHHHH-------HHHHHHHhcccCCChhce
Confidence 48899999999999999998642 224688999999875322111 1112222 899999999 58999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++|..+..+|+||||+++ +|.+++. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl 146 (290)
T cd05613 71 HYAFQTDTKLHLILDYINGGELFTHLS--QRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVL 146 (290)
T ss_pred eeEeecCCeEEEEEecCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC--CEEE
Confidence 9999999999999999995 9999998 345688999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 147 ~dfg~~~~ 154 (290)
T cd05613 147 TDFGLSKE 154 (290)
T ss_pred eeCcccee
Confidence 99999873
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=278.97 Aligned_cols=187 Identities=18% Similarity=0.157 Sum_probs=154.4
Q ss_pred eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
++.||+|+||.||++++... ..++..+|+|++.+............ +|+++|+.++||||+++++++.+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~---~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITG---PDAGQLYAMKVLKKATLKVRDRVRTK--------MERDILAEVNHPFIVKLHYAFQT 69 (318)
T ss_pred CceeeeCCCEEEEEEEEecc---CCCCCEEEEEEEEHHHhhhhhHHHHH--------HHHHHHHhCCCCCcccEEEEEEc
Confidence 36899999999999986421 24688999999976432222222232 89999999999999999999999
Q ss_pred CCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
++.+|+||||++ |+|.+++. +...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 70 ~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~ 145 (318)
T cd05582 70 EGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLS 145 (318)
T ss_pred CCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC--cEEEeeccCC
Confidence 999999999998 59999997 456689999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+....... ......||+.|+|||++.+..++.++|+|+.|++.
T Consensus 146 ~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il 188 (318)
T cd05582 146 KESIDHEK-----------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 188 (318)
T ss_pred cccCCCCC-----------ceecccCChhhcCHHHHcCCCCCCccceeccceEe
Confidence 85432100 01123478899999999999999999999999664
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=278.46 Aligned_cols=192 Identities=20% Similarity=0.213 Sum_probs=156.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|+++ .++..+|+|++++.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~~~~hp~iv~~~~~~~~ 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLK------KTERIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEhhHhcchhHHHHHH-------HHHHHHHhcCCCCcCCceeeEEEe
Confidence 47999999999999965 46789999999865333322222232 788888776 89999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
++.+|+||||+++ +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--~~kL~DfG~~ 143 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--CEEEeeCCcc
Confidence 9999999999995 9998887 456789999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
+........ .....||+.|+|||++.+..++.++|+|+.|++ .+.++.|+.
T Consensus 144 ~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~ 194 (329)
T cd05618 144 KEGLRPGDT-----------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL-------MFEMMAGRS 194 (329)
T ss_pred ccccCCCCc-----------cccccCCccccCHHHHcCCCCCCccceecccHH-------HHHHhhCCC
Confidence 753211100 111247899999999999999999999999955 444555654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=281.30 Aligned_cols=198 Identities=17% Similarity=0.152 Sum_probs=155.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.++||+|+||.||+|.+.. .....++..||+|+++... .......+. +|+.+|+.+ +|||||+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFG-IDKKSSCNTVAVKMLKEGA-TASEHKALM--------SELKILIHIGNHLNVVN 75 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEec-cCCcccchhhheecccccc-chHHHHHHH--------HHHHHHHHhccCcceee
Confidence 4689999999999999999998531 1122456789999987532 222333444 899999999 8999999
Q ss_pred eeeEEEeCC-eEEEeccCCC-CCHHHHHhhCC------------------------------------------------
Q 000316 240 VLGLLKTSG-LITSVIPKTP-YTLENILQFSP------------------------------------------------ 269 (1678)
Q Consensus 240 l~~~~~~~~-~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------ 269 (1678)
+++++...+ .+++||||++ |+|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 999887644 6899999999 59999997421
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCCccccc
Q 000316 270 ------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337 (1678)
Q Consensus 270 ------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~ 337 (1678)
...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~~~~~~~-- 231 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV-- 231 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccccCcchh--
Confidence 12477788899999999999999999999999999999999998 89999999998543211100
Q ss_pred CCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 338 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 338 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
......+++.|||||++.+..|+.++|+|+.|++.
T Consensus 232 -------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il 266 (338)
T cd05102 232 -------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLL 266 (338)
T ss_pred -------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHH
Confidence 01122356789999999999999999999999654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-26 Score=270.14 Aligned_cols=150 Identities=17% Similarity=0.173 Sum_probs=128.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcC-hHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS-GQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
...|+..+.||+|+||.||+|++. .++..+|+|.+...... .....++. +|+++++.++||||++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 79 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQ 79 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEc------CCCcEEEEEEEecccccChHHHHHHH--------HHHHHHHhCCCCCccc
Confidence 345888999999999999999964 46788999998653222 22223344 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++......++||||+.|+|.+++.. ....+++..+..++.|++.||.|||+++++||||||+|||++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~kl 156 (308)
T cd06634 80 YRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156 (308)
T ss_pred EEEEEEcCCeeEEEEEccCCCHHHHHHH-cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC--cEEE
Confidence 9999999999999999999999888763 345589999999999999999999999999999999999999998 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||++..
T Consensus 157 ~dfg~~~~ 164 (308)
T cd06634 157 GDFGSASI 164 (308)
T ss_pred CCccccee
Confidence 99998863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=275.09 Aligned_cols=201 Identities=16% Similarity=0.146 Sum_probs=170.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|..-+.||+|+||+||-|+.+ .+|+.+|.|.+.+........... +++|..+|+.++.+.||.+
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvr------aTGKMYAcKkL~KKRiKkr~ge~m-------aLnEk~iL~kV~s~FiVsl 250 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVR------ATGKMYACKKLDKKRIKKRKGETM-------ALNEKQILEKVSSPFIVSL 250 (591)
T ss_pred ccceeeeEEEecccccceeEEEEe------cchhhHHHHHHHHHHHHHhhhhHH-------hhHHHHHHHHhccCcEEEE
Confidence 457888999999999999998854 689999999987754333222221 3599999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
-.+|++.+.+++||..|.| ||.-.|....+..+++..+++|+.+|+.||++||+.+||.|||||+|||+|+.| +++|
T Consensus 251 aYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--hvRI 328 (591)
T KOG0986|consen 251 AYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--HVRI 328 (591)
T ss_pred eeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--CeEe
Confidence 9999999999999999995 999888866667899999999999999999999999999999999999999999 9999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCCC
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~ 395 (1678)
+|+|+|....... + .+.-+||..|||||++.+..|+...|.|+.||+ ++.+++|++.
T Consensus 329 SDLGLAvei~~g~-------~-----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCl-------lYemi~G~sP 385 (591)
T KOG0986|consen 329 SDLGLAVEIPEGK-------P-----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCL-------LYEMIAGHSP 385 (591)
T ss_pred eccceEEecCCCC-------c-----cccccCcccccCHHHHcCCcccCCccHHHHHhH-------HHHHHcccCc
Confidence 9999998655211 1 112258999999999999999999999999955 4566677763
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=256.78 Aligned_cols=147 Identities=21% Similarity=0.279 Sum_probs=129.8
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|++|.||++.+. ..+..+++|.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNL------ETGDFVAIKQISLEKIKEEALKSIM--------QEIDLLKNLKHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEc------CCCcEEEEEEecccccCHHHHHHHH--------HHHHHHHhCCCCCccEEEE
Confidence 5899999999999999999864 4678899999977544333333444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+++..++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~~l~d 142 (254)
T cd06627 67 SIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG--VVKLAD 142 (254)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC--CEEEec
Confidence 99999999999999996 99999983 46789999999999999999999999999999999999999988 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||+++.
T Consensus 143 ~~~~~~ 148 (254)
T cd06627 143 FGVATK 148 (254)
T ss_pred ccccee
Confidence 999874
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-25 Score=257.20 Aligned_cols=147 Identities=20% Similarity=0.210 Sum_probs=129.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|++|.||+|.+. .++..+++|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDK------DTGELMAVKSVELSGDSEEELEALE--------REIRILSSLQHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEEC------CCCcEEEEEEeeccccchHHHHHHH--------HHHHHHHHcCCCCEeeEEE
Confidence 5889999999999999999964 4688999999876544333333343 8999999999999999999
Q ss_pred EEEeC--CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 243 LLKTS--GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 243 ~~~~~--~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
.+... ...++||||++ ++|.+++.. ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--~~~l 142 (260)
T cd06606 67 SERDEEKNTLNIFLEYVSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVKL 142 (260)
T ss_pred EEecCCCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEE
Confidence 99988 89999999997 599999984 33789999999999999999999999999999999999999988 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||.+..
T Consensus 143 ~d~~~~~~ 150 (260)
T cd06606 143 ADFGCAKR 150 (260)
T ss_pred cccccEEe
Confidence 99999874
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=258.93 Aligned_cols=149 Identities=20% Similarity=0.257 Sum_probs=129.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.++||+|+||.||++++. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRL------SDNQFYALKEVDLGSMSQKEREDAV--------NEIRILASVNHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEEC------CCCCEEEEEEEehhhccHHHHHHHH--------HHHHHHHhCCCCCchhhhh
Confidence 5899999999999999999864 4678899999876444433334444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+....|+||||+++ +|.+++... ....+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~--~~kl 144 (256)
T cd08530 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND--LVKI 144 (256)
T ss_pred hhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC--cEEE
Confidence 99999999999999985 999998742 235688999999999999999999999999999999999999988 8999
Q ss_pred EecCCccc
Q 000316 320 CDKPLVGF 327 (1678)
Q Consensus 320 ~DFGlA~~ 327 (1678)
+|||+++.
T Consensus 145 ~d~g~~~~ 152 (256)
T cd08530 145 GDLGISKV 152 (256)
T ss_pred eeccchhh
Confidence 99999874
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=278.58 Aligned_cols=202 Identities=20% Similarity=0.201 Sum_probs=165.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|..-..||+|+||.||+|.- .++..||||.+....... .++|. +|+.+|.+++|||+|+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l-------~~~~~vAVK~~~~~~~~~--~~eF~--------~Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVL-------SDGTVVAVKRLSSNSGQG--EREFL--------NEVEILSRLRHPNLVKL 136 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEE-------CCCCEEEEEEecCCCCcc--hhHHH--------HHHHHHhcCCCcCcccE
Confidence 35788889999999999998883 456899999886643321 44566 99999999999999999
Q ss_pred eeEEEeCC-eEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCCCCCeEecCCCce
Q 000316 241 LGLLKTSG-LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL---GIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 241 ~~~~~~~~-~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~---gIiHRDLKP~NILl~~~g~~ 315 (1678)
+|+|.+.+ ..+||+|||+ |+|.+.+.......++......|+.++++||+|||.. .||||||||+|||+|++.
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-- 214 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-- 214 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC--
Confidence 99999988 5999999999 7999999853332677777778999999999999994 499999999999999999
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCCC
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~ 395 (1678)
..||+|||+|+..... ... . .+...||..|+|||.......+.++|++++| +..++.++||..
T Consensus 215 ~aKlsDFGLa~~~~~~-~~~----~-----~~~~~gt~gY~~PEy~~~g~lt~KsDVySFG-------VvllElitgr~~ 277 (361)
T KOG1187|consen 215 NAKLSDFGLAKLGPEG-DTS----V-----STTVMGTFGYLAPEYASTGKLTEKSDVYSFG-------VVLLELITGRKA 277 (361)
T ss_pred CEEccCccCcccCCcc-ccc----e-----eeecCCCCccCChhhhccCCcCcccccccch-------HHHHHHHhCCcc
Confidence 9999999999754420 000 0 0000488999999999998999999999999 777788999966
Q ss_pred CCC
Q 000316 396 GDY 398 (1678)
Q Consensus 396 ~dl 398 (1678)
-|.
T Consensus 278 ~d~ 280 (361)
T KOG1187|consen 278 VDQ 280 (361)
T ss_pred cCC
Confidence 554
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=261.50 Aligned_cols=140 Identities=19% Similarity=0.233 Sum_probs=121.4
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
||.|+||.||++++. .++..+++|.+......... ...+. +|+.+++.++||||+++++.+..+.
T Consensus 1 lg~g~~~~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~~~~~~~ 66 (265)
T cd05579 1 ISKGAYGRVFLAKKK------STGDIYAIKVIKKADMIRKNQVDQVL--------TERDILSQAQSPYVVKLYYSFQGKK 66 (265)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEecchhhhhhhHHHHHH--------HHHHHHHhCCCcchhHHHHheecCc
Confidence 689999999999964 45789999998764332222 22232 8999999999999999999999999
Q ss_pred eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
..|+||||++| +|.+++.. ...+++..+..++.||+.||.|||++||+||||+|+||+++.++ .+||+|||++..
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~--~~~l~dfg~~~~ 142 (265)
T cd05579 67 NLYLVMEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG--HLKLTDFGLSKV 142 (265)
T ss_pred EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC--CEEEEecccchh
Confidence 99999999985 99999983 34789999999999999999999999999999999999999999 899999999863
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-26 Score=276.92 Aligned_cols=184 Identities=17% Similarity=0.175 Sum_probs=152.6
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|++. .++..+|+|++.+.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~~~~~~~~~~i~~~~~~~~~ 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLK------KNDQIYAMKVVKKELVHDDEDIDWVQ-------TEKHVFEQASSNPFLVGLHSCFQT 67 (327)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhhcCCCCEeeEEEEEEe
Confidence 47999999999999965 46789999999865333322223332 899999888 69999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
.+.+|+||||++| +|..++. ..+.+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~ 143 (327)
T cd05617 68 TSRLFLVIEYVNGGDLMFHMQ--RQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--HIKLTDYGMC 143 (327)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--CEEEeccccc
Confidence 9999999999985 9998887 455789999999999999999999999999999999999999999 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+....... . .....||+.|+|||++.+..|+.++|+|+.|++.
T Consensus 144 ~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 186 (327)
T cd05617 144 KEGLGPGD-----T------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLM 186 (327)
T ss_pred eeccCCCC-----c------eecccCCcccCCHHHHCCCCCCchheeehhHHHH
Confidence 75321110 0 1112378999999999999999999999999554
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-26 Score=289.12 Aligned_cols=175 Identities=17% Similarity=0.030 Sum_probs=117.7
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
...++|++.++||+|+||.||+|++.... ...+..||+|++........ .. .| .++...+.+++
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~--~~~~~~vAvK~~~~~~~~e~----~~--------~e--~l~~~~~~~~~ 192 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQ--SKKEGKYVLKKATEYGAVEI----WM--------NE--RVRRACPNSCA 192 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCc--cccCcEEEEEEecccchhHH----HH--------HH--HHHhhchhhHH
Confidence 34678999999999999999999965211 12378899999764321111 11 11 11122223333
Q ss_pred ceeeE------EEeCCeEEEeccCCCC-CHHHHHhhCCC------------------CCCCHHHHHHHHHHHHHHHHHHH
Q 000316 239 PVLGL------LKTSGLITSVIPKTPY-TLENILQFSPN------------------ALKSEWHVRFLMYQLLSAIAYLH 293 (1678)
Q Consensus 239 ~l~~~------~~~~~~~~lVmEy~~g-~L~~~l~~~~~------------------~~l~~~~i~~i~~qil~aL~yLH 293 (1678)
.+... ...+...++||||+++ +|.+++..... ....+..++.++.||+.||.|||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH 272 (566)
T PLN03225 193 DFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH 272 (566)
T ss_pred HHHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH
Confidence 33222 1345679999999995 99999873211 01123456789999999999999
Q ss_pred hCCceecCCCCCCeEecC-CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc
Q 000316 294 SLGIAHRSVCPSNVLLTD-SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 294 ~~gIiHRDLKP~NILl~~-~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 361 (1678)
++||+||||||+|||++. ++ .+||+|||+|+........ ......+++.|||||.+
T Consensus 273 ~~gIiHRDLKP~NILl~~~~~--~~KL~DFGlA~~l~~~~~~----------~~~~~~~t~~Y~APE~~ 329 (566)
T PLN03225 273 STGIVHRDVKPQNIIFSEGSG--SFKIIDLGAAADLRVGINY----------IPKEFLLDPRYAAPEQY 329 (566)
T ss_pred HCCEEeCcCCHHHEEEeCCCC--cEEEEeCCCcccccccccc----------CCcccccCCCccChHHh
Confidence 999999999999999986 46 8999999999854321110 01123468899999964
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-25 Score=237.27 Aligned_cols=277 Identities=19% Similarity=0.278 Sum_probs=229.1
Q ss_pred EEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEE--EEecCCccEEEEeecCCCCc-E--EeCCCcE
Q 000316 1321 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS--GYYGHEEVVNDICVLSSSGR-I--ASCDGTL 1395 (1678)
Q Consensus 1321 ~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~--~l~gH~~~V~sV~fs~~~~~-l--aS~DgtV 1395 (1678)
+.+++|...|.+|+|+.+|..+++|+. |+++++|+++.++.+. .++||++.|-.++|+|...- + +|+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~----dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSF----DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeeccc----CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 667899999999999999999999996 9999999998876554 35799999999999886543 3 7789999
Q ss_pred EEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCC
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dg 1475 (1678)
++||.++++++........ -..+.++|+|+++++++.|.
T Consensus 90 r~wd~r~~k~~~~i~~~~e-----------------------------------------ni~i~wsp~g~~~~~~~kdD 128 (313)
T KOG1407|consen 90 RIWDIRSGKCTARIETKGE-----------------------------------------NINITWSPDGEYIAVGNKDD 128 (313)
T ss_pred EEEEeccCcEEEEeeccCc-----------------------------------------ceEEEEcCCCCEEEEecCcc
Confidence 9999999999877653211 12356778899999999999
Q ss_pred cEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCC
Q 000316 1476 SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDG 1555 (1678)
Q Consensus 1476 tVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~ 1555 (1678)
.|.+.|.++.+.+...+ +.-.++.++|.. +++++......|+|.|...-..+++.++++|..
T Consensus 129 ~it~id~r~~~~~~~~~-------~~~e~ne~~w~~-----------~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~s 190 (313)
T KOG1407|consen 129 RITFIDARTYKIVNEEQ-------FKFEVNEISWNN-----------SNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPS 190 (313)
T ss_pred cEEEEEecccceeehhc-------ccceeeeeeecC-----------CCCEEEEecCCceEEEEeccccccccccccCCc
Confidence 99999999988776554 344466677652 234566666679999999999999999999998
Q ss_pred CeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCC
Q 000316 1556 YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDG 1631 (1678)
Q Consensus 1556 ~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1631 (1678)
.+.||. +|+|++||+||.|..+.+||+..- .++..+..+.-+|. +||.||++||+||.|. |-|-++. .|
T Consensus 191 nCicI~f~p~GryfA~GsADAlvSLWD~~EL--iC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~ve-----tG 263 (313)
T KOG1407|consen 191 NCICIEFDPDGRYFATGSADALVSLWDVDEL--ICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVE-----TG 263 (313)
T ss_pred ceEEEEECCCCceEeeccccceeeccChhHh--hhheeeccccCceEEEEeccCcceeeccCccceEEeEecc-----cC
Confidence 888888 999999999999999999999876 67778888999999 6999999999999999 8887764 22
Q ss_pred cceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCC---------CcEEEc
Q 000316 1632 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTED---------GYLRLC 1677 (1678)
Q Consensus 1632 ~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~D---------G~IrIw 1677 (1678)
.++|... +.++...|+|+|...+||-+++| |+||++
T Consensus 264 ------d~~~eI~----~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 264 ------DRVWEIP----CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred ------CeEEEee----ccCCceeEEecCCCceeeEEecCCCCccccccceeEEe
Confidence 2555543 67899999999999999988775 567765
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=261.33 Aligned_cols=148 Identities=20% Similarity=0.194 Sum_probs=119.6
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEecc---CCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIE---GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~---~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
+|.+.+.||+|+||.||++++.. .+..+++|.++. .........+.. +|+.+++.++||||++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 66 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKK------AVAEERLKVLKEIPVGELNPNETVQAN--------QEAQLLSKLDHPAIVK 66 (260)
T ss_pred CceeeeeecCCCCceEEEEEecC------CCCcceEEEeccccccccCcchHHHHH--------HHHHHHHhCCCCcHHH
Confidence 58999999999999999998642 233344444432 222222222222 7999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++++.+....++||||+++ +|.+++.. .....+++..++.++.|++.||.|||++||+||||||+||+++.+ .
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~---~ 143 (260)
T cd08222 67 FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN---L 143 (260)
T ss_pred HHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC---C
Confidence 99999999999999999995 99988864 234568999999999999999999999999999999999999864 4
Q ss_pred EEEEecCCccc
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 lKL~DFGlA~~ 327 (1678)
+||+|||+++.
T Consensus 144 ~~l~d~g~~~~ 154 (260)
T cd08222 144 LKIGDFGVSRL 154 (260)
T ss_pred EeecccCceee
Confidence 99999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.7e-27 Score=277.09 Aligned_cols=213 Identities=15% Similarity=0.144 Sum_probs=176.4
Q ss_pred EeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEE
Q 000316 166 PIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 245 (1678)
Q Consensus 166 ~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~ 245 (1678)
-++-||.|+-|.||+|+ -.++.||||+++.-+ + .||+-|++|+|||||.+.|++.
T Consensus 128 ELeWlGSGaQGAVF~Gr--------l~netVAVKKV~elk---E--------------TdIKHLRkLkH~NII~FkGVCt 182 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGR--------LHNETVAVKKVRELK---E--------------TDIKHLRKLKHPNIITFKGVCT 182 (904)
T ss_pred hhhhhccCcccceeeee--------ccCceehhHHHhhhh---h--------------hhHHHHHhccCcceeeEeeeec
Confidence 47889999999999998 357889999985421 1 6888999999999999999999
Q ss_pred eCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
....+|||||||. |-|..+|+ .+..++......|..+|+.|+.|||.+.|||||||.-||||+.+. .|||+|||.
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d--~VKIsDFGT 258 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD--VVKISDFGT 258 (904)
T ss_pred CCceeEEeeeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc--eEEeccccc
Confidence 9999999999999 79999999 567788899999999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC-CCCCcCCcc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTFHMV 403 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs-~~dl~q~pv 403 (1678)
++.... ..+.+. +.||..|||||+++..+.+.++|+|++| +...+++.|.. |.|..+..|
T Consensus 259 S~e~~~------~STkMS------FaGTVaWMAPEvIrnePcsEKVDIwSfG-------VVLWEmLT~EiPYkdVdssAI 319 (904)
T KOG4721|consen 259 SKELSD------KSTKMS------FAGTVAWMAPEVIRNEPCSEKVDIWSFG-------VVLWEMLTGEIPYKDVDSSAI 319 (904)
T ss_pred hHhhhh------hhhhhh------hhhhHhhhCHHHhhcCCcccccceehhH-------HHHHHHHhcCCCccccchhee
Confidence 986442 122333 3389999999999999999999999999 55556666654 888888877
Q ss_pred cceEe-cCCCC--CCCCCCCcCccCCc
Q 000316 404 MPWVI-DFSTK--PDENFDSGSRDLSK 427 (1678)
Q Consensus 404 ~pwv~-d~~~~--~~~~~~~~~rdLsk 427 (1678)
+ |=. ..... -+...|..|+-|-|
T Consensus 320 I-wGVGsNsL~LpvPstcP~GfklL~K 345 (904)
T KOG4721|consen 320 I-WGVGSNSLHLPVPSTCPDGFKLLLK 345 (904)
T ss_pred E-EeccCCcccccCcccCchHHHHHHH
Confidence 6 333 33333 35567777776654
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-25 Score=264.80 Aligned_cols=149 Identities=19% Similarity=0.226 Sum_probs=126.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|.+. .++..+|||.++..... ....+++ +|+.++... .||||++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~i~~ 78 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFK------KTGHVMAVKQMRRTGNK-EENKRIL--------MDLDVVLKSHDCPYIVK 78 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEEC------CCCeEEEEEEEeccCCh-HHHHHHH--------HHHHHHHhccCCCchHh
Confidence 578999999999999999999964 35789999999754322 2233344 677766666 4999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++.++...|+||||++++|.+++... ...+++..+..++.||+.||.|||+ +||+||||||+||+++.++ .+|
T Consensus 79 ~~~~~~~~~~~~~v~e~~~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~--~~k 155 (296)
T cd06618 79 CYGYFITDSDVFICMELMSTCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG--NVK 155 (296)
T ss_pred hheeeecCCeEEEEeeccCcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC--CEE
Confidence 99999999999999999998888888742 3478999999999999999999997 6999999999999999988 899
Q ss_pred EEecCCccc
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 L~DFGlA~~ 327 (1678)
|+|||+++.
T Consensus 156 L~dfg~~~~ 164 (296)
T cd06618 156 LCDFGISGR 164 (296)
T ss_pred ECccccchh
Confidence 999999863
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-27 Score=284.50 Aligned_cols=191 Identities=17% Similarity=0.123 Sum_probs=158.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
..|..-+.||+|+||.||+++++ ++|..||||.+++.. .......+. +|+++|++++|||||+++
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnk------etG~~vAvK~~~~~~-~~r~~e~~~--------~EieilkKLnh~NIVk~f 77 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNK------ETGRLVAVKTFNKES-SLRPRERWC--------REIEILKKLNHPNIVKLF 77 (732)
T ss_pred cceeehhhhcCCccceeeeeccc------ccccchhHHhhhhhc-ccchHHHHH--------HHHHHHHHcCchhhhhhc
Confidence 35677899999999999999965 789999999998743 233333444 899999999999999999
Q ss_pred eEEEeCC------eEEEeccCCC-CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC--
Q 000316 242 GLLKTSG------LITSVIPKTP-YTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-- 311 (1678)
Q Consensus 242 ~~~~~~~------~~~lVmEy~~-g~L~~~l~~~~-~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~-- 311 (1678)
++-++.. ...+|||||. |+|..+++.-. ...+++.+++.++..++.||.|||++||+||||||.||++-.
T Consensus 78 ~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge 157 (732)
T KOG4250|consen 78 DIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE 157 (732)
T ss_pred ccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC
Confidence 9876544 5689999999 59999998633 346999999999999999999999999999999999999854
Q ss_pred CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc-cccccccccccccCccc
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~y~~~~d~W~~G~is 379 (1678)
+|...-||+|||.||...... .....+||+.|.+||+.. +..|+..+|.|+.|++.
T Consensus 158 dgq~IyKLtDfG~Arel~d~s------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvtl 214 (732)
T KOG4250|consen 158 DGQSIYKLTDFGAARELDDNS------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTL 214 (732)
T ss_pred CCceEEeeecccccccCCCCC------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHH
Confidence 344567999999999765322 234457999999999999 58899999999999654
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-25 Score=264.95 Aligned_cols=142 Identities=19% Similarity=0.183 Sum_probs=122.6
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|+...+||+|+||.||++... .++..+|+|.+.... ......+. +|+.+++.++||||+++++.
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 85 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVK------SSGKLVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHENVVEMYNS 85 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEc------CCCeEEEEEEecccc--hhHHHHHH--------HHHHHHHhcCCcchhheeeE
Confidence 455678999999999999864 478899999985422 22223333 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
+...+..++||||+++ +|.+++. ...+++..++.++.|++.||+|||++||+||||||+||+++.++ .+||+||
T Consensus 86 ~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~--~~~l~df 160 (292)
T cd06657 86 YLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG--RVKLSDF 160 (292)
T ss_pred EEeCCEEEEEEecCCCCcHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEccc
Confidence 9999999999999996 8888775 34578999999999999999999999999999999999999998 8999999
Q ss_pred CCcc
Q 000316 323 PLVG 326 (1678)
Q Consensus 323 GlA~ 326 (1678)
|++.
T Consensus 161 g~~~ 164 (292)
T cd06657 161 GFCA 164 (292)
T ss_pred ccce
Confidence 9876
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.9e-25 Score=242.29 Aligned_cols=333 Identities=17% Similarity=0.209 Sum_probs=234.2
Q ss_pred EEEEeCCCCEEEEeCCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEe
Q 000316 1301 LGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDIC 1380 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~ 1380 (1678)
|++.=.|++++ ..+++.+.||.+.|+.|+.......+.++|. |.+.+||.+++|+|+.+|.||.+.|++|+
T Consensus 127 ivssFk~~t~~-----~~lvre~~GHkDGiW~Vaa~~tqpi~gtASA----DhTA~iWs~Esg~CL~~Y~GH~GSVNsik 197 (481)
T KOG0300|consen 127 IVSSFKDGTVK-----FRLVRELEGHKDGIWHVAADSTQPICGTASA----DHTARIWSLESGACLATYTGHTGSVNSIK 197 (481)
T ss_pred heeeecCCcee-----EeehhhhcccccceeeehhhcCCcceeeccc----ccceeEEeeccccceeeecccccceeeEE
Confidence 44444445543 2467889999999999999888889999998 99999999999999999999999999999
Q ss_pred ecCCCCcE--EeCCCcEEEEECCCC----ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeee--c
Q 000316 1381 VLSSSGRI--ASCDGTLHVWNSQTG----KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAF--D 1452 (1678)
Q Consensus 1381 fs~~~~~l--aS~DgtVrIWD~~tg----~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f--~ 1452 (1678)
|++.+..+ +|+|++.+||...-. +.... ..|+.......+ ....... ..-...+++.-.+.-+.+ +
T Consensus 198 fh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~-~~hSsEeE~e~s--De~~~d~---d~~~~sD~~tiRvPl~~ltgH 271 (481)
T KOG0300|consen 198 FHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAP-SDHSSEEEEEHS--DEHNRDT---DSSEKSDGHTIRVPLMRLTGH 271 (481)
T ss_pred eccccceEEEccCCcchHHHHHhhcCcCCCCCCC-CCCCchhhhhcc--ccccccc---ccccccCCceeeeeeeeeecc
Confidence 99887776 788999999973211 10000 001100000000 0000000 000011112222222222 3
Q ss_pred CCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEec
Q 000316 1453 GNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1678)
Q Consensus 1453 ~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~ 1532 (1678)
-..+.+..|...|++++++++|.+..+||+++|+.++.+.||.....|. +- -|...++++.+.
T Consensus 272 ~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHc------st-----------HptQrLVvTsSr 334 (481)
T KOG0300|consen 272 RAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHC------ST-----------HPTQRLVVTSSR 334 (481)
T ss_pred ccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhcccc------cc-----------CCcceEEEEecc
Confidence 3345666667779999999999999999999999999999987765432 11 145578999999
Q ss_pred CCeEEEEeCCCC-cEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCE
Q 000316 1533 SGQCRLFDVRSG-NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQD 1609 (1678)
Q Consensus 1533 Dg~I~lWD~~tg-~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~ 1609 (1678)
|.+.++||.+.. ..+..|+||...|+++....+..++|||.|.+|+|||+++.+ ..+.+++. ..+++ +++.-+..
T Consensus 335 DtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMR-splATIRt-dS~~NRvavs~g~~i 412 (481)
T KOG0300|consen 335 DTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMR-SPLATIRT-DSPANRVAVSKGHPI 412 (481)
T ss_pred CceeEeccchhhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecccc-Ccceeeec-CCccceeEeecCCce
Confidence 999999999853 467889999999999996666789999999999999999874 45566654 34444 57776778
Q ss_pred EEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCC--EEEEEeCCCcEEEc
Q 000316 1610 VISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSR--LFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1610 LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~--lLatgs~DG~IrIw 1677 (1678)
++.--+++ |++||++. +- ...+-.. ..++|+..|++++|+.+.. -|.+||.|..+.=|
T Consensus 413 IAiPhDNRqvRlfDlnG------~R---laRlPrt-sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW 473 (481)
T KOG0300|consen 413 IAIPHDNRQVRLFDLNG------NR---LARLPRT-SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGW 473 (481)
T ss_pred EEeccCCceEEEEecCC------Cc---cccCCcc-cccccceeeeeeeccccCcccccccccccceeeee
Confidence 88888888 99999862 21 1111111 1236999999999996653 47799999988766
|
|
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-27 Score=267.00 Aligned_cols=205 Identities=17% Similarity=0.135 Sum_probs=170.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
..+|..+.+||+|+||.|.+|..+ .+...+|||+++++-....+..+.. +.|-++|... +-|.+++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerk------gtdELyAiKiLkKDViiQdDDvect-------m~EKrvLAL~~kppFL~q 414 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERK------GTDELYAIKILKKDVIIQDDDVECT-------MVEKRVLALPGKPPFLVQ 414 (683)
T ss_pred ecccceEEEeccCccceeeeeccc------CcchhhhhhhhccceeeecCcccce-------ehhhhheecCCCCchHHH
Confidence 458999999999999999999954 4678899999998755544333332 3788888877 4589999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++.+|++-+.+|+||||+.| +|.-.|+ .-+.+.|..+.+|+.+|+-||-|||++|||.||||.+|||++.+| ++|
T Consensus 415 lHScFQTmDRLyFVMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG--HiK 490 (683)
T KOG0696|consen 415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIK 490 (683)
T ss_pred HHHHhhhhhheeeEEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC--ceE
Confidence 99999999999999999995 9998888 567899999999999999999999999999999999999999999 999
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
|+|||+++.+... ..+.++-| |||-|+|||++.-++|+..+|.|+.|.+. ||+|..-.+|.|..
T Consensus 491 i~DFGmcKEni~~-----~~TTkTFC------GTPdYiAPEIi~YqPYgksvDWWa~GVLL-yEmlaGQpPFdGeD 554 (683)
T KOG0696|consen 491 IADFGMCKENIFD-----GVTTKTFC------GTPDYIAPEIIAYQPYGKSVDWWAFGVLL-YEMLAGQPPFDGED 554 (683)
T ss_pred eeecccccccccC-----Ccceeeec------CCCcccccceEEecccccchhHHHHHHHH-HHHHcCCCCCCCCC
Confidence 9999999965522 22333334 79999999999999999999999999554 55555544444443
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-26 Score=247.75 Aligned_cols=268 Identities=14% Similarity=0.220 Sum_probs=226.4
Q ss_pred ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeE--------EeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEe
Q 000316 1289 PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILS--------SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWE 1359 (1678)
Q Consensus 1289 fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~--------tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWD 1359 (1678)
|||||++ |++||.||-+-+||.. |+..+ .+.-|.++|.|++||.|...++||+. ||.|++|.
T Consensus 221 FSPDgqy-----LvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsq----DGkIKvWr 291 (508)
T KOG0275|consen 221 FSPDGQY-----LVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQ----DGKIKVWR 291 (508)
T ss_pred eCCCCce-----EeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCc----CCcEEEEE
Confidence 9999998 9999999999999977 54333 34468999999999999999999998 99999999
Q ss_pred CCCCeEEEEEe-cCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccc
Q 000316 1360 LTRINCVSGYY-GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1436 (1678)
Q Consensus 1360 l~tg~~l~~l~-gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~ 1436 (1678)
+.+|.|++.|. +|+..|+|+.|+.++..+ +|.|.+||+.-+++|++++.+.+|+.
T Consensus 292 i~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsS---------------------- 349 (508)
T KOG0275|consen 292 IETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSS---------------------- 349 (508)
T ss_pred EecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccc----------------------
Confidence 99999999986 899999999999999888 66699999999999999999987742
Q ss_pred cccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccc
Q 000316 1437 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQ 1516 (1678)
Q Consensus 1437 ~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s 1516 (1678)
.++...++++|..+++++.||+|++|+..+++|+.+++.... ...|++|-.-|
T Consensus 350 ------------------yvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~----d~~vnsv~~~P----- 402 (508)
T KOG0275|consen 350 ------------------YVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGT----DYPVNSVILLP----- 402 (508)
T ss_pred ------------------cccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCC----cccceeEEEcC-----
Confidence 244455677899999999999999999999999999986543 23466665543
Q ss_pred cCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc----CCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeE
Q 000316 1517 AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH----DGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTV 1592 (1678)
Q Consensus 1517 ~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH----~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~ 1592 (1678)
.++..++++...++|++-++. |+.++++... ...|.++.+|.|.++.+.+.|+.++.+.+.+| ....+
T Consensus 403 -----Knpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG--~LE~t 474 (508)
T KOG0275|consen 403 -----KNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSG--KLERT 474 (508)
T ss_pred -----CCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecC--ceeee
Confidence 234678888899999999975 8888888632 23466666999999999999999999999998 44568
Q ss_pred eecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1593 FKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1593 l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
+..|...|.. -.|..+.+|+-+.|+ +++|.
T Consensus 475 l~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 475 LPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eecccccccccccCcccchhhhhcccchhhhcC
Confidence 8888887774 678899999999999 99995
|
|
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.5e-26 Score=294.19 Aligned_cols=209 Identities=18% Similarity=0.136 Sum_probs=162.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
+++|++.++||+|+||.||+|.+. .+++.||+|++......... ..++. +|+++++.++||||++
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~------~tg~~VAIK~I~~~l~~~e~~~~rfl--------rEi~ILs~L~HPNIVk 66 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDP------VCSRRVALKKIREDLSENPLLKKRFL--------REAKIAADLIHPGIVP 66 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEEC------CCCcEEEEEEECcccccCHHHHHHHH--------HHHHHHHhCCCcCcCe
Confidence 368999999999999999999965 46789999999764332222 23344 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 309 (1678)
+++++.+++..|+||||++| +|.+++.... ...++...+..++.||+.||+|||++||+||||||+|||+
T Consensus 67 l~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILL 146 (932)
T PRK13184 67 VYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL 146 (932)
T ss_pred EEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEE
Confidence 99999999999999999995 9999986311 1234566778899999999999999999999999999999
Q ss_pred cCCCceeEEEEecCCcccCCCCCccc--ccCC-----CCcceeecccccCcccccccccccccccccccccccCccchhh
Q 000316 310 TDSCWSWLYICDKPLVGFNSIADWCT--IPTS-----PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1678)
Q Consensus 310 ~~~g~~~lKL~DFGlA~~~~~~~~~~--~~~~-----~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfe 382 (1678)
+.++ .+||+|||+|+......... .... ...........||+.|||||++.+..++.++|+|+.|++. |+
T Consensus 147 d~dg--~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVIL-yE 223 (932)
T PRK13184 147 GLFG--EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVIL-YQ 223 (932)
T ss_pred cCCC--CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHH-HH
Confidence 9999 89999999998652111000 0000 0000011123589999999999999999999999999665 44
Q ss_pred hHhh
Q 000316 383 YLLF 386 (1678)
Q Consensus 383 yL~~ 386 (1678)
.+++
T Consensus 224 LLTG 227 (932)
T PRK13184 224 MLTL 227 (932)
T ss_pred HHHC
Confidence 4443
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.4e-26 Score=274.75 Aligned_cols=181 Identities=18% Similarity=0.192 Sum_probs=146.6
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh-HHHHHHHHhcCCCchhHHHhhccC---CCCcccceeeEEE
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL---RHPNVAPVLGLLK 245 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~l~~~~~~~~~Ei~iL~~l---~HpNIV~l~~~~~ 245 (1678)
||+|+||+||+|+++ .++..||+|++.+..... ......+ +|..++..+ +||||+++++++.
T Consensus 1 lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~p~i~~~~~~~~ 66 (330)
T cd05586 1 IGKGTFGQVYQVRKK------DTRRIYAMKVLSKKEIVAKKEVAHTI--------GERNILVRTLLDESPFIVGLKFSFQ 66 (330)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEEeHHHHhhhhHHHHHH--------HHHHHHHHhccCCCCcCcceEEEEe
Confidence 799999999999965 568899999986532221 1122222 677777665 6999999999999
Q ss_pred eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 246 ~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
+.+.+|+||||++| +|.+++. +...+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~ 142 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIALCDFGL 142 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEecCCc
Confidence 99999999999985 9999987 456789999999999999999999999999999999999999999 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCcccccccccccc-cccccccccccCccc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELS 379 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~y~~~~d~W~~G~is 379 (1678)
++........ .....||+.|||||++.+. .|+.++|+|+.|++.
T Consensus 143 a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil 187 (330)
T cd05586 143 SKANLTDNKT-----------TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV 187 (330)
T ss_pred CcCCCCCCCC-----------ccCccCCccccCHHHHcCCCCCCCccceeccccEE
Confidence 9753211100 1112378999999988654 589999999999664
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.2e-25 Score=251.03 Aligned_cols=146 Identities=19% Similarity=0.259 Sum_probs=128.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|+..+.||+|++|.||++.+. .++..+++|++..... ....++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 64 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHK------RTGKEVAIKVIKLESK--EKKEKII--------NEIQILKKCKHPNIVKYYG 64 (253)
T ss_pred CceeeeeeccCCceEEEEEEEC------CCCcEEEEEEecccch--hHHHHHH--------HHHHHHHhCCCCCEeEEEE
Confidence 4889999999999999999964 3678899999876432 2233343 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+..+...++++||++ ++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|
T Consensus 65 ~~~~~~~~~l~~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d 141 (253)
T cd05122 65 SYLKKDELWIVMEFCSGGSLKDLLKST-NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG--EVKLID 141 (253)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC--eEEEee
Confidence 9999999999999999 4999999842 25689999999999999999999999999999999999999988 899999
Q ss_pred cCCccc
Q 000316 322 KPLVGF 327 (1678)
Q Consensus 322 FGlA~~ 327 (1678)
||.+..
T Consensus 142 ~~~~~~ 147 (253)
T cd05122 142 FGLSAQ 147 (253)
T ss_pred cccccc
Confidence 998864
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=268.94 Aligned_cols=199 Identities=16% Similarity=0.129 Sum_probs=157.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC----------CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~ 230 (1678)
.++|++.++||+|+||.||+|.+.-.. .....+..||+|.+... .......++. +|+++|+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~ 74 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFL--------KEVKILS 74 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHH--------HHHHHHh
Confidence 467999999999999999999853211 01124568999998753 2233334454 8999999
Q ss_pred cCCCCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCC-----------------CCCCCHHHHHHHHHHHHHHHHHH
Q 000316 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP-----------------NALKSEWHVRFLMYQLLSAIAYL 292 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~-----------------~~~l~~~~i~~i~~qil~aL~yL 292 (1678)
.++||||+++++++.+.+..++||||+++ +|.+++.... ...++...+..++.||+.||.||
T Consensus 75 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 154 (304)
T cd05096 75 RLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154 (304)
T ss_pred hcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999984 9999986421 12356778899999999999999
Q ss_pred HhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccc
Q 000316 293 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNR 372 (1678)
Q Consensus 293 H~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~ 372 (1678)
|++||+||||||+|||++.++ .+||+|||+++......... ......++..|||||++.+..++.++|+
T Consensus 155 H~~~ivH~dlkp~Nill~~~~--~~kl~DfG~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 223 (304)
T cd05096 155 SSLNFVHRDLATRNCLVGENL--TIKIADFGMSRNLYAGDYYR---------IQGRAVLPIRWMAWECILMGKFTTASDV 223 (304)
T ss_pred HHCCccccCcchhheEEcCCc--cEEECCCccceecccCceeE---------ecCcCCCCccccCHHHHhcCCCCchhhh
Confidence 999999999999999999998 89999999998543211100 1112335778999999988899999999
Q ss_pred cccCccc
Q 000316 373 WWRGELS 379 (1678)
Q Consensus 373 W~~G~is 379 (1678)
|+.|.+.
T Consensus 224 ~slG~~l 230 (304)
T cd05096 224 WAFGVTL 230 (304)
T ss_pred HHHHHHH
Confidence 9999664
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-26 Score=272.18 Aligned_cols=196 Identities=14% Similarity=0.188 Sum_probs=164.0
Q ss_pred ccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC---CC
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HP 235 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~---Hp 235 (1678)
....+|..++.+|+|+||.|++|.++ ++..+|+||.|.+.+.-.....+-.+ +| +.--||+||..|+ |+
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K------~n~~eVViK~I~KeRIL~DtWvrDrk-LG-tVp~EIqIla~l~~~sH~ 629 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHK------ENNYEVVIKMIFKERILVDTWVRDRK-LG-TVPSEIQILATLNKHSHE 629 (772)
T ss_pred cccccceeeeeccccccceEEEeeec------ccceEEEeeehhhhhhhhhhhhcccc-cC-ccchhHHHHHHhhhcCcc
Confidence 34557999999999999999999986 56889999999887654432221111 22 2238999999997 99
Q ss_pred cccceeeEEEeCCeEEEeccCCC-C-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTP-Y-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~-g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
||++++++|++++++||+||--. | ||+++|. ....++|.+++.|++|++.|+++||++||||||||-||+.++.+|
T Consensus 630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE--~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIE--FKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred chhhhhheeecCCeeEEEecCCCCCcchhhhhh--ccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence 99999999999999999999776 6 9999999 456689999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccccc-ccccccccCccc
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWH-SQFNRWWRGELS 379 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~-~~~d~W~~G~is 379 (1678)
-+||+|||.|...... + ....+||..|+|||++.+.+|- ..-|+|..|.+.
T Consensus 708 --~~klidfgsaa~~ksg--------p-----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgill 759 (772)
T KOG1152|consen 708 --FVKLIDFGSAAYTKSG--------P-----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILL 759 (772)
T ss_pred --eEEEeeccchhhhcCC--------C-----cceeeeeccccchhhhCCCccCCCcchhhhhhhee
Confidence 8999999999865421 1 1224689999999999999994 578999999664
|
|
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-24 Score=270.92 Aligned_cols=274 Identities=22% Similarity=0.341 Sum_probs=225.6
Q ss_pred EEecc-ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEE-EecCCccEEEEeecCCCCcE--EeCCCcEE
Q 000316 1321 SSIRA-HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSG-YYGHEEVVNDICVLSSSGRI--ASCDGTLH 1396 (1678)
Q Consensus 1321 ~tl~g-H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~-l~gH~~~V~sV~fs~~~~~l--aS~DgtVr 1396 (1678)
..+.+ |...|.+..|. +.++++|+. |+++++||..++..+.+ +.||.+.|.++++...+..+ +|.|+|++
T Consensus 201 ~~~~~~~~~~~~~~q~~--~~~~~~~s~----~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~r 274 (537)
T KOG0274|consen 201 KVLLGTDDHVVLCLQLH--DGFFKSGSD----DSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTER 274 (537)
T ss_pred eeecccCcchhhhheee--cCeEEecCC----CceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEE
Confidence 34444 56678888888 447888886 89999999999999888 99999999999996645555 66699999
Q ss_pred EEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCc
Q 000316 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1678)
Q Consensus 1397 IWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dgt 1476 (1678)
+||..+|+|..++.+|... +.++.. ....+++|+.|.+
T Consensus 275 vWd~~sg~C~~~l~gh~st------------------------------v~~~~~------------~~~~~~sgs~D~t 312 (537)
T KOG0274|consen 275 VWDCSTGECTHSLQGHTSS------------------------------VRCLTI------------DPFLLVSGSRDNT 312 (537)
T ss_pred eEecCCCcEEEEecCCCce------------------------------EEEEEc------------cCceEeeccCCce
Confidence 9999999999999876422 222222 2447788999999
Q ss_pred EEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCC
Q 000316 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1678)
Q Consensus 1477 VrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~ 1556 (1678)
|++||+.++.+++++.+| ...|+++... +.++++|+.||+|++||+.++++++++.||.+.
T Consensus 313 VkVW~v~n~~~l~l~~~h------~~~V~~v~~~-------------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~ 373 (537)
T KOG0274|consen 313 VKVWDVTNGACLNLLRGH------TGPVNCVQLD-------------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGR 373 (537)
T ss_pred EEEEeccCcceEEEeccc------cccEEEEEec-------------CCEEEEEecCceEEEEEhhhceeeeeecCCcce
Confidence 999999999999999864 4558888753 479999999999999999999999999999999
Q ss_pred eEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEEecCCEEEEEeCCC-eEEEecCCCCCCCCcce
Q 000316 1557 VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHR 1634 (1678)
Q Consensus 1557 V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~ 1634 (1678)
|.++. ... ..+++||.|++|++||+++.. +++.++.+|.+-|..+..+++.|++++.|+ |++||.. ++...
T Consensus 374 V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~-~c~~tl~~h~~~v~~l~~~~~~Lvs~~aD~~Ik~WD~~-----~~~~~ 446 (537)
T KOG0274|consen 374 VYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR-KCIHTLQGHTSLVSSLLLRDNFLVSSSADGTIKLWDAE-----EGECL 446 (537)
T ss_pred EEEEEecCc-ceEEeeeeccceEeecCCchh-hhhhhhcCCcccccccccccceeEeccccccEEEeecc-----cCcee
Confidence 99997 433 899999999999999999874 677899999999999999999999999999 9999964 33221
Q ss_pred eccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1635 LVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1635 ~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
. ...+. |.+.|+.+++. ...+++++.||++++||
T Consensus 447 ~-------~~~~~-~~~~v~~l~~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 447 R-------TLEGR-HVGGVSALALG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred e-------eeccC-CcccEEEeecC--cceEEEEecCCeeEEEe
Confidence 1 11221 56778888776 57888999999999996
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-26 Score=271.14 Aligned_cols=196 Identities=16% Similarity=0.085 Sum_probs=160.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+..+...||+|+||+||+|++. -.||||+++......+..+.|. +|+.++++-+|.||+-++|
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~wh---------GdVAVK~Lnv~~pt~~qlqaFK--------nEVa~lkkTRH~NIlLFMG 455 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWH---------GDVAVKLLNVDDPTPEQLQAFK--------NEVAVLKKTRHENILLFMG 455 (678)
T ss_pred Hhhccceeccccccceeecccc---------cceEEEEEecCCCCHHHHHHHH--------HHHHHHhhcchhhheeeeh
Confidence 5678999999999999999842 4599999998777777666666 9999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..+.. .||.-+|+| +|+.+|+- .+..|.....+.|++||++|+.|||.++|||||||..||++.+++ .|||.|
T Consensus 456 ~~~~p~~-AIiTqwCeGsSLY~hlHv-~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~--kVkIgD 531 (678)
T KOG0193|consen 456 ACMNPPL-AIITQWCEGSSLYTHLHV-QETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL--KVKIGD 531 (678)
T ss_pred hhcCCce-eeeehhccCchhhhhccc-hhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC--cEEEec
Confidence 9998876 899999998 99999984 446688899999999999999999999999999999999999998 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccc---cccccccccccccCccchhhhHhhhcc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~y~~~~d~W~~G~isnfeyL~~ln~ 389 (1678)
||++.....-........ -.|...|||||+++ ..+|+..+|++++|.+. ||+++.--+
T Consensus 532 FGLatvk~~w~g~~q~~q---------p~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~-YELltg~lP 592 (678)
T KOG0193|consen 532 FGLATVKTRWSGEQQLEQ---------PHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW-YELLTGELP 592 (678)
T ss_pred ccceeeeeeeccccccCC---------CccchhhhcHHHHhhcccCCCCcccchhhhhHHH-HHHHhCcCC
Confidence 999975332110000011 12556899999887 46789999999999554 555544333
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=279.54 Aligned_cols=189 Identities=20% Similarity=0.114 Sum_probs=158.0
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
....|.+.+.||+|+||.||+|.+. ..+..||||..... ... +|+++|+.++|||||+
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~------~~~~~vavK~~~~~--------~~~--------~E~~iL~~L~HpnIv~ 224 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHP------DYPQRVVVKAGWYA--------SSV--------HEARLLRRLSHPAVLA 224 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEEC------CCCCEEEEeccccc--------CHH--------HHHHHHHHCCCCCCCc
Confidence 3457999999999999999999965 45788999964221 122 8999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
+++++..++..++|||++.++|.+++.. ....++...++.++.||+.||.|||++||+||||||+||||+.++ .+||
T Consensus 225 l~~~~~~~~~~~lv~e~~~~~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~--~vkL 301 (461)
T PHA03211 225 LLDVRVVGGLTCLVLPKYRSDLYTYLGA-RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE--DICL 301 (461)
T ss_pred EEEEEEECCEEEEEEEccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC--CEEE
Confidence 9999999999999999999999999873 334689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhh
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 383 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfey 383 (1678)
+|||+++......... ......||+.|||||++.+..++.++|+|+.|++. |+.
T Consensus 302 ~DFGla~~~~~~~~~~---------~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL-~El 355 (461)
T PHA03211 302 GDFGAACFARGSWSTP---------FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVI-FEA 355 (461)
T ss_pred cccCCceecccccccc---------cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHH-HHH
Confidence 9999998643211100 01123489999999999999999999999999765 443
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-25 Score=276.76 Aligned_cols=197 Identities=18% Similarity=0.128 Sum_probs=157.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|++.. .+...++..||+|.++.... ......+. +|+.+|+.+ +|||||+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~il~~l~~h~nIv~ 106 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFG-LGKEDNVLRVAVKMLKASAH-TDEREALM--------SELKILSHLGQHKNIVN 106 (374)
T ss_pred HHHceehheecCCCcccEEEEEEec-CCcccccceeEEEeccCCCC-HHHHHHHH--------HHHHHHHhhccCCceee
Confidence 4579999999999999999998642 22334567899999975432 22223333 899999999 8999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCC-------------------------------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 269 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------- 269 (1678)
+++++.....+++|||||+ |+|.++++...
T Consensus 107 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (374)
T cd05106 107 LLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRP 186 (374)
T ss_pred EeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCC
Confidence 9999999999999999999 59999986321
Q ss_pred -------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCC
Q 000316 270 -------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 330 (1678)
Q Consensus 270 -------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~ 330 (1678)
...++...++.++.||+.||.|||++||+||||||+|||+++++ .+||+|||+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~--~~kL~DfGla~~~~~ 264 (374)
T cd05106 187 VSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR--VAKICDFGLARDIMN 264 (374)
T ss_pred ccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC--eEEEeeceeeeeccC
Confidence 12467888999999999999999999999999999999999988 899999999985432
Q ss_pred CCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 331 ADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
.... .......++..|||||++.+..|+.+.|+|+.|++
T Consensus 265 ~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvi 303 (374)
T cd05106 265 DSNY---------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 303 (374)
T ss_pred Ccce---------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHH
Confidence 1100 01112235667999999999999999999999954
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.4e-26 Score=274.57 Aligned_cols=215 Identities=16% Similarity=0.110 Sum_probs=170.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccC-CcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+-.+.++||+|+||+||+|+-+...+. ....||+|..+.. ........+++ +|.++|+.++|||||++|
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~--~~~~VAvK~~k~~~~~~~~~~~e~m--------~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGF--KVVPVAVKTTKGSSELTKEQIKEFM--------KEARVMRQLNHPNVVRFY 227 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCc--eeeeeEEEeecccccccHHHHHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 455679999999999999996542110 1223899998752 24556666777 999999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
|+......+|||||+|.| +|.++|+..++ .++..+...++.+.+.||+|||++++|||||-.+|+|++.++ .+||+
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~--~vKIS 304 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG--VVKIS 304 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC--eEEeC
Confidence 999999999999999995 99999995333 589999999999999999999999999999999999999998 78999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhcccc-C-CCCCCC
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-G-RRWGDY 398 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~a-G-Rs~~dl 398 (1678)
|||+++........ ...+.-...|+|||.+...-|+.++|+|+.|.+. .+.++ | .+|..+
T Consensus 305 DFGLs~~~~~~~~~-----------~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~-------~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMK-----------KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLL-------WEIFENGAEPYPGM 366 (474)
T ss_pred ccccccCCcceeec-----------cccccCcceecChhhhccCccccccchhheeeeE-------EeeeccCCCCCCCC
Confidence 99999864311100 1112235679999999999999999999999543 44444 2 256777
Q ss_pred cCCcccceEe
Q 000316 399 TFHMVMPWVI 408 (1678)
Q Consensus 399 ~q~pv~pwv~ 408 (1678)
..+-+-.||+
T Consensus 367 ~~~~v~~kI~ 376 (474)
T KOG0194|consen 367 KNYEVKAKIV 376 (474)
T ss_pred CHHHHHHHHH
Confidence 7777777885
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=263.36 Aligned_cols=280 Identities=17% Similarity=0.267 Sum_probs=230.9
Q ss_pred EEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEE
Q 000316 1321 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVW 1398 (1678)
Q Consensus 1321 ~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIW 1398 (1678)
..++..+..|..++|+|.-..++++-- .|.|++||..-+.++..|.+|.++|..|+|+|....++|+ |-+|++|
T Consensus 3 tkfEskSsRvKglsFHP~rPwILtslH----sG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 3 TKFESKSSRVKGLSFHPKRPWILTSLH----SGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVW 78 (1202)
T ss_pred chhhcccccccceecCCCCCEEEEeec----CceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEE
Confidence 345667788999999999999999985 7999999999999999999999999999999999999776 8999999
Q ss_pred ECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEE
Q 000316 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1678)
Q Consensus 1399 D~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVr 1478 (1678)
+..+.+|+.++.+|- ..|..+ .|++.-..++++|.|.|||
T Consensus 79 nYk~rrclftL~GHl------------------------------DYVRt~----------~FHheyPWIlSASDDQTIr 118 (1202)
T KOG0292|consen 79 NYKTRRCLFTLLGHL------------------------------DYVRTV----------FFHHEYPWILSASDDQTIR 118 (1202)
T ss_pred ecccceehhhhcccc------------------------------ceeEEe----------eccCCCceEEEccCCCeEE
Confidence 999999988887652 223444 4445577999999999999
Q ss_pred EEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC--------C------
Q 000316 1479 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS--------G------ 1544 (1678)
Q Consensus 1479 lWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t--------g------ 1544 (1678)
||+..+++++..+.|| ...|.|-.|.|.. ..++++|-|.+|||||+.- |
T Consensus 119 IWNwqsr~~iavltGH------nHYVMcAqFhptE-----------DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~ 181 (1202)
T KOG0292|consen 119 IWNWQSRKCIAVLTGH------NHYVMCAQFHPTE-----------DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQM 181 (1202)
T ss_pred EEeccCCceEEEEecC------ceEEEeeccCCcc-----------ceEEEecccceEEEEeecchhccCCCCCCchhhh
Confidence 9999999999999965 4568887776433 5899999999999999842 1
Q ss_pred -------------c--EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEec
Q 000316 1545 -------------N--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVW 1606 (1678)
Q Consensus 1545 -------------~--~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpd 1606 (1678)
. .-..+.||+..|+-++ +|.-.+++||+.|+.|++|.....+.-.+.+.+||.+.|.+ |+|.
T Consensus 182 ~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~ 261 (1202)
T KOG0292|consen 182 RGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPH 261 (1202)
T ss_pred hccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecCc
Confidence 1 1234679999999999 99889999999999999999876543445688999999997 8999
Q ss_pred CCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEE
Q 000316 1607 GQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLR 1675 (1678)
Q Consensus 1607 g~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~Ir 1675 (1678)
...++|.|.|+ |+|||+..... ...++ +..+.-+.++.+|...+||+|-+.|.+-
T Consensus 262 q~lIlSnsEDksirVwDm~kRt~---------v~tfr-----rendRFW~laahP~lNLfAAgHDsGm~V 317 (1202)
T KOG0292|consen 262 QDLILSNSEDKSIRVWDMTKRTS---------VQTFR-----RENDRFWILAAHPELNLFAAGHDSGMIV 317 (1202)
T ss_pred cceeEecCCCccEEEEecccccc---------eeeee-----ccCCeEEEEEecCCcceeeeecCCceEE
Confidence 99999999999 99999863211 11121 2345678899999999999999888763
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=251.50 Aligned_cols=141 Identities=23% Similarity=0.264 Sum_probs=122.2
Q ss_pred eeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCCe
Q 000316 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1678)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~~ 249 (1678)
||+|+||.||++.+. .++..+|+|.+.+............. +|+.+++.++||||+++++.+..+..
T Consensus 1 lg~G~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (250)
T cd05123 1 LGKGSFGKVLLVRKK------DTGKLYAMKVLKKKKIIKRKEVEHTL-------TERNILSRINHPFIVKLHYAFQTEEK 67 (250)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEeehhhhcchHHHHHHH-------HHHHHHHHcCCCcHHHHHHHeecCCe
Confidence 699999999999964 36789999998765443322222222 89999999999999999999999999
Q ss_pred EEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 250 ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 250 ~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
.|+||||++ ++|.+++.. ...+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||++..
T Consensus 68 ~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~--~~~l~d~~~~~~ 142 (250)
T cd05123 68 LYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG--HIKLTDFGLAKE 142 (250)
T ss_pred eEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC--cEEEeecCccee
Confidence 999999996 599999983 44689999999999999999999999999999999999999999 899999999874
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-25 Score=262.83 Aligned_cols=194 Identities=15% Similarity=0.170 Sum_probs=158.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|..+.. ...+..||+|.++... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~---~~~~~~vaik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 71 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLP---SKRELPVAIHTLRAGC-SDKQRRGFL--------AEALTLGQFDHSNIVRL 71 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecC---CCceeeEEEEecCCCC-CHHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 35799999999999999999986431 2456889999987642 223333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++..++||||+++ +|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+|+
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~--~~~l 148 (266)
T cd05064 72 EGVITRGNTMMIVTEYMSNGALDSFLRK-HEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL--VCKI 148 (266)
T ss_pred EEEEecCCCcEEEEEeCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC--cEEE
Confidence 9999999999999999995 99999874 245689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||.+......... . .....++..|+|||++.+..++.++|+|+.|++.
T Consensus 149 ~dfg~~~~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 198 (266)
T cd05064 149 SGFRRLQEDKSEAIY----T------TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM 198 (266)
T ss_pred CCCcccccccccchh----c------ccCCCCceeecCHHHHhhCCccchhHHHHHHHHH
Confidence 999987653211000 0 0011245689999999999999999999999664
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=271.04 Aligned_cols=189 Identities=17% Similarity=0.079 Sum_probs=131.5
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCC----------CccccceEEEEEEeccCCcChHHHHHHHHh------cCCCch
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRL------IGVPSF 223 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~------~~~~~~ 223 (1678)
..++|++.++||+|+||+||+|...-.. .....++.||||.+..... ....+|++. .....+
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 4678999999999999999999742100 1113457899999865321 122233310 111234
Q ss_pred hHHHhhccCCCCcc-----cceeeEEEe--------CCeEEEeccCCC-CCHHHHHhhCC--------------------
Q 000316 224 DESSVPGCLRHPNV-----APVLGLLKT--------SGLITSVIPKTP-YTLENILQFSP-------------------- 269 (1678)
Q Consensus 224 ~Ei~iL~~l~HpNI-----V~l~~~~~~--------~~~~~lVmEy~~-g~L~~~l~~~~-------------------- 269 (1678)
.|+.++.+++|.|+ ++++++|.. ++..++||||++ ++|.++++...
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 67788888876554 677777653 346899999999 49999886321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeec
Q 000316 270 --NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347 (1678)
Q Consensus 270 --~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~ 347 (1678)
...++...++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++....... ....
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~~~~~----~~~~------ 368 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG--QVKIIDFGAAVDMCTGIN----FNPL------ 368 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC--cEEEEeCcCccccccCCc----cCcc------
Confidence 11234567888999999999999999999999999999999998 899999999975331110 0000
Q ss_pred ccccCcccccccccc
Q 000316 348 GCSSQGLYADLKLSQ 362 (1678)
Q Consensus 348 ~~~gt~~Y~APE~~~ 362 (1678)
...+|+.|+|||++.
T Consensus 369 ~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 369 YGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCCcceeChhhhc
Confidence 112478899999864
|
|
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=273.67 Aligned_cols=198 Identities=17% Similarity=0.106 Sum_probs=156.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.++||+|+||.||+|+... .....++..||+|+++.... ......+. +|+.+|+.+ +|||||+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~-~~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~Ei~il~~l~~HpnIv~ 103 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYG-LFKSDAAMTVAVKMLKPSAH-LTEREALM--------SELKVLSYLGNHINIVN 103 (375)
T ss_pred hHHeehhheecCCccceEEEEEEec-cccCccceeEEEEeccCCcC-cHHHHHHH--------HHHHHHHHhcCCcceee
Confidence 4479999999999999999997421 11224567899999875322 22223333 899999999 8999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCC-------------------------------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 269 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------- 269 (1678)
+++++.+.+..++|||||+ |+|.++++...
T Consensus 104 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (375)
T cd05104 104 LLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKA 183 (375)
T ss_pred eeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccc
Confidence 9999999999999999999 59999986421
Q ss_pred ------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 270 ------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 270 ------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a 261 (375)
T cd05104 184 DKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLA 261 (375)
T ss_pred ccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccc
Confidence 12467788899999999999999999999999999999999988 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+......... ......++..|+|||++.+..++.++|+|+.|++.
T Consensus 262 ~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l 306 (375)
T cd05104 262 RDIRNDSNYV---------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 306 (375)
T ss_pred eeccCccccc---------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHH
Confidence 8543211110 01112346679999999999999999999999654
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.8e-24 Score=240.52 Aligned_cols=276 Identities=20% Similarity=0.274 Sum_probs=215.7
Q ss_pred ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCc---E--EeCCCcEEEEEC
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR---I--ASCDGTLHVWNS 1400 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~---l--aS~DgtVrIWD~ 1400 (1678)
|.+.|.+|... ++.|+||+ |||++|+||.. |++..++.||+++|.+++|...+.. + ||.|.++++|..
T Consensus 104 hdDWVSsv~~~--~~~Iltgs----YDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~ 176 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGS----YDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKW 176 (423)
T ss_pred chhhhhhhccc--CceEEEee----cCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEe
Confidence 89999999888 77999999 59999999975 8999999999999999998654443 4 666999999998
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
+.++..-.... ...+|... |.++++.++|..+++|+.|.+|++|
T Consensus 177 ~~~~~~~~~~~--------------------------~~~GHk~~----------V~sVsv~~sgtr~~SgS~D~~lkiW 220 (423)
T KOG0313|consen 177 NVGENKVKALK--------------------------VCRGHKRS----------VDSVSVDSSGTRFCSGSWDTMLKIW 220 (423)
T ss_pred cCchhhhhHHh--------------------------Hhcccccc----------eeEEEecCCCCeEEeecccceeeec
Confidence 87754321110 00123333 5566666789999999999999999
Q ss_pred ECCCC-------------------------eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCe
Q 000316 1481 DINQG-------------------------QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQ 1535 (1678)
Q Consensus 1481 Dl~tg-------------------------~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~ 1535 (1678)
+..+. .++-++. +|...|.+|-|+. ...+++++.|.+
T Consensus 221 s~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~------GHt~~Vs~V~w~d------------~~v~yS~SwDHT 282 (423)
T KOG0313|consen 221 SVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE------GHTEPVSSVVWSD------------ATVIYSVSWDHT 282 (423)
T ss_pred ccCCCccccccccchhhhhhhhhhhcccccCceEEec------ccccceeeEEEcC------------CCceEeecccce
Confidence 93211 1222233 5666788888853 357899999999
Q ss_pred EEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCC-CCeEeecCCCCEEE--EEecC-CEE
Q 000316 1536 CRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS-QPTVFKGHTNGISG--FSVWG-QDV 1610 (1678)
Q Consensus 1536 I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~-~~~~l~gH~~~V~a--fSpdg-~~L 1610 (1678)
|+.||+.+|..+.++.+ ...++++. ++..++|++||.|..|++||.+++... ...++.||++.|.+ ++|.. .+|
T Consensus 283 Ik~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~ 361 (423)
T KOG0313|consen 283 IKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQL 361 (423)
T ss_pred EEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEE
Confidence 99999999999988885 56789999 899999999999999999999986433 33589999999996 77765 458
Q ss_pred EEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1611 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1611 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
+||+.|+ +++||+... ...+|... +|...|.++.|+ ++..+++||.|++|+|+
T Consensus 362 ~S~S~D~t~klWDvRS~----------k~plydI~---~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~ 415 (423)
T KOG0313|consen 362 VSGSYDNTVKLWDVRST----------KAPLYDIA---GHNDKVLSVDWN-EGGLIVSGGADNKLRIF 415 (423)
T ss_pred EEEecCCeEEEEEeccC----------CCcceeec---cCCceEEEEecc-CCceEEeccCcceEEEe
Confidence 9999999 999998522 11344433 588999999996 67789999999999986
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.7e-25 Score=233.97 Aligned_cols=277 Identities=17% Similarity=0.269 Sum_probs=221.7
Q ss_pred EEeccccccEEEEEEec---CCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcE
Q 000316 1321 SSIRAHHGALRSVAVGQ---DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTL 1395 (1678)
Q Consensus 1321 ~tl~gH~~~V~svafsp---dg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtV 1395 (1678)
.+-.||+.+|-.++||| +|-+|+|++. |+.--+=+-+||..+.+|.||.+.|++.+...+..+. ++.|-+-
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~k----d~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadfta 83 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASK----DGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTA 83 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEecc----CCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchh
Confidence 45679999999999985 8889999998 8887787888999999999999999999986655555 4559999
Q ss_pred EEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCC
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dg 1475 (1678)
++||.-+|..+.+|.. .+.|..++|+.|.++|++|+.++
T Consensus 84 kvw~a~tgdelhsf~h-----------------------------------------khivk~~af~~ds~~lltgg~ek 122 (334)
T KOG0278|consen 84 KVWDAVTGDELHSFEH-----------------------------------------KHIVKAVAFSQDSNYLLTGGQEK 122 (334)
T ss_pred hhhhhhhhhhhhhhhh-----------------------------------------hheeeeEEecccchhhhccchHH
Confidence 9999999998877763 23466777778899999999999
Q ss_pred cEEEEECCCCe-eeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC
Q 000316 1476 SLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1554 (1678)
Q Consensus 1476 tVrlWDl~tg~-~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~ 1554 (1678)
.+|++|++..+ +...+.+ |+..|+.+-||... +.+++.+.|++||+||.++|+.++++. -.
T Consensus 123 llrvfdln~p~App~E~~g------htg~Ir~v~wc~eD-----------~~iLSSadd~tVRLWD~rTgt~v~sL~-~~ 184 (334)
T KOG0278|consen 123 LLRVFDLNRPKAPPKEISG------HTGGIRTVLWCHED-----------KCILSSADDKTVRLWDHRTGTEVQSLE-FN 184 (334)
T ss_pred HhhhhhccCCCCCchhhcC------CCCcceeEEEeccC-----------ceEEeeccCCceEEEEeccCcEEEEEe-cC
Confidence 99999998753 3444554 45568888887543 578888999999999999999999998 46
Q ss_pred CCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCC
Q 000316 1555 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADED 1630 (1678)
Q Consensus 1555 ~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~ 1630 (1678)
.+|+++. +++|++|. -+..++|+.||..+- ..+..++... .|. +++|+...++.|+.|. ++.||....
T Consensus 185 s~VtSlEvs~dG~ilT-ia~gssV~Fwdaksf--~~lKs~k~P~-nV~SASL~P~k~~fVaGged~~~~kfDy~Tg---- 256 (334)
T KOG0278|consen 185 SPVTSLEVSQDGRILT-IAYGSSVKFWDAKSF--GLLKSYKMPC-NVESASLHPKKEFFVAGGEDFKVYKFDYNTG---- 256 (334)
T ss_pred CCCcceeeccCCCEEE-EecCceeEEeccccc--cceeeccCcc-ccccccccCCCceEEecCcceEEEEEeccCC----
Confidence 7899999 88887654 456789999999875 3333333322 233 4999999999999999 999998622
Q ss_pred CcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1631 GQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1631 g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
.. +-... .+|-++|.++.|+|||..-|+||+||+||||
T Consensus 257 -eE------i~~~n--kgh~gpVhcVrFSPdGE~yAsGSEDGTirlW 294 (334)
T KOG0278|consen 257 -EE------IGSYN--KGHFGPVHCVRFSPDGELYASGSEDGTIRLW 294 (334)
T ss_pred -ce------eeecc--cCCCCceEEEEECCCCceeeccCCCceEEEE
Confidence 11 11111 2588999999999999999999999999999
|
|
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-25 Score=257.27 Aligned_cols=187 Identities=21% Similarity=0.288 Sum_probs=159.0
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++++.||+|+||.||++++. .++..+|+|.+.............. +|+.+++.++||||++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNK------KNGQKVAVKIIDKSEIEEEEREENI--------REIKILRRLRHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEET------TTTEEEEEEEEESTTHHHHHHHHHH--------HHHHHHHHHTBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEEC------CCCeEEEEEEeccccccccccchhh--------hhhhcccccccccccccccc
Confidence 899999999999999999975 5778999999987543333322333 79999999999999999999
Q ss_pred EEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
+.+....++||||+++ +|.+++. ....+++..+..++.||+.||.+||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~--~~~l~Df 142 (260)
T PF00069_consen 67 FQDDNYLYIVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG--EVKLIDF 142 (260)
T ss_dssp EEESSEEEEEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS--EEEESSG
T ss_pred cccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc--ccccccc
Confidence 9999999999999997 9999998 466789999999999999999999999999999999999999988 8999999
Q ss_pred CCcccCCCCCcccccCCCCcceeecccccCcccccccccc-cccccccccccccCccc
Q 000316 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~y~~~~d~W~~G~is 379 (1678)
|.+........ ......++..|+|||++. +..++.++|+|+.|.+.
T Consensus 143 g~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il 189 (260)
T PF00069_consen 143 GSSVKLSENNE-----------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIIL 189 (260)
T ss_dssp TTTEESTSTTS-----------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHH
T ss_pred ccccccccccc-----------cccccccccccccccccccccccccccccccccccc
Confidence 99975311000 112234788999999998 88899999999999653
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.6e-25 Score=252.88 Aligned_cols=284 Identities=22% Similarity=0.215 Sum_probs=227.0
Q ss_pred ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe--EEEEEecCCccEEEEeecCCCCcE--EeCCC
Q 000316 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVVNDICVLSSSGRI--ASCDG 1393 (1678)
Q Consensus 1318 ~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~--~l~~l~gH~~~V~sV~fs~~~~~l--aS~Dg 1393 (1678)
.....+..|.+.|..+.|.++...|++||. |..|++|++..++ .+.++.|..+.|++++|.+++..+ +|.|+
T Consensus 166 ~~~~~ld~h~gev~~v~~l~~sdtlatgg~----Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~ 241 (459)
T KOG0288|consen 166 RALFVLDAHEGEVHDVEFLRNSDTLATGGS----DRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDK 241 (459)
T ss_pred hhhhhhhccccccceeEEccCcchhhhcch----hhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCC
Confidence 456678889999999999999999999997 9999999987766 677889999999999999998887 56699
Q ss_pred cEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEEC
Q 000316 1394 TLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG 1473 (1678)
Q Consensus 1394 tVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~ 1473 (1678)
++++|++...+...++.+|. .. ++++.+......+++|+.
T Consensus 242 ~~r~Wnvd~~r~~~TLsGHt------------------------------dk----------Vt~ak~~~~~~~vVsgs~ 281 (459)
T KOG0288|consen 242 NLRLWNVDSLRLRHTLSGHT------------------------------DK----------VTAAKFKLSHSRVVSGSA 281 (459)
T ss_pred ceeeeeccchhhhhhhcccc------------------------------cc----------eeeehhhccccceeeccc
Confidence 99999999999888887753 22 444444444555999999
Q ss_pred CCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc
Q 000316 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH 1553 (1678)
Q Consensus 1474 DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH 1553 (1678)
|.+||+||+..+.|.++.-. .+.+..|+.. +..+++|..|++||+||.+++.+......|
T Consensus 282 DRtiK~WDl~k~~C~kt~l~-------~S~cnDI~~~-------------~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g 341 (459)
T KOG0288|consen 282 DRTIKLWDLQKAYCSKTVLP-------GSQCNDIVCS-------------ISDVISGHFDKKVRFWDIRSADKTRSVPLG 341 (459)
T ss_pred cchhhhhhhhhhheeccccc-------cccccceEec-------------ceeeeecccccceEEEeccCCceeeEeecC
Confidence 99999999999888776542 3334555542 257899999999999999999999999977
Q ss_pred CCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeec----CCCCEEEEEecCCEEEEEeCCC-eEEEecCCCC
Q 000316 1554 DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKG----HTNGISGFSVWGQDVISISNNK-IGLSSLSKSA 1627 (1678)
Q Consensus 1554 ~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~g----H~~~V~afSpdg~~LaSgs~D~-I~vwdl~~~~ 1627 (1678)
. .|++|. +.+|..|.|++.|.++.+.|+++......+.-.+ |.-.-..|||++.++++||.|+ |+||++..
T Consensus 342 g-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~t-- 418 (459)
T KOG0288|consen 342 G-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFT-- 418 (459)
T ss_pred c-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccC--
Confidence 5 899999 9999999999999999999999874333332222 2211114999999999999999 99999751
Q ss_pred CCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+|+............|++++|+|.|..|++++.++.+.+|-
T Consensus 419 ----------gKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 419 ----------GKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred ----------ceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 23333333322233799999999999999999999999994
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-26 Score=252.95 Aligned_cols=191 Identities=18% Similarity=0.184 Sum_probs=157.1
Q ss_pred cccccCCCeeE-eeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-C
Q 000316 156 SCSRIMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-R 233 (1678)
Q Consensus 156 ~~~~~~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~ 233 (1678)
....+.++|.+ -++||-|-.|.|..|.++ .++..+|+|++.... . . -||+++.-.. .
T Consensus 55 k~~~itedY~is~qvLG~GinGkV~~C~~k------~T~ekfALKvL~Ds~---K----A--------RrEVeLHw~~s~ 113 (400)
T KOG0604|consen 55 KEYSITEDYSISWQVLGAGINGKVVQCVHK------RTQEKFALKVLLDSP---K----A--------RREVELHWMASG 113 (400)
T ss_pred hcccchhhheehhhhhccccCCceEEEEec------cchhhhHHHHHhcCH---H----H--------HhHhhhhhhhcC
Confidence 34445778887 578999999999999976 688999999985321 1 1 1788876555 6
Q ss_pred CCcccceeeEEEe----CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeE
Q 000316 234 HPNVAPVLGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 308 (1678)
Q Consensus 234 HpNIV~l~~~~~~----~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 308 (1678)
|||||.++++|+. ...+.+|||+|+| +|+..|+....+.|+|.++..|++||+.|+.|||+.+|.||||||||+|
T Consensus 114 h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLL 193 (400)
T KOG0604|consen 114 HPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLL 193 (400)
T ss_pred CCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhee
Confidence 9999999999864 3478899999995 9999999777778999999999999999999999999999999999999
Q ss_pred ecCCCc-eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 309 LTDSCW-SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 309 l~~~g~-~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
....+. ..+||+|||+|+.... ....++.| -||+|.|||++....|+..+|+|+.|.|.
T Consensus 194 yt~t~~na~lKLtDfGFAK~t~~------~~~L~TPc------~TPyYvaPevlg~eKydkscdmwSlgVim 253 (400)
T KOG0604|consen 194 YTTTSPNAPLKLTDFGFAKETQE------PGDLMTPC------FTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253 (400)
T ss_pred eecCCCCcceEecccccccccCC------CccccCCc------ccccccCHHHhCchhcCCCCCccchhHHH
Confidence 986543 3899999999996442 12222333 38999999999999999999999999664
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-23 Score=227.64 Aligned_cols=286 Identities=16% Similarity=0.170 Sum_probs=222.5
Q ss_pred cccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeC-CCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCe
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKI-KASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1278 ~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~-~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dgt 1354 (1678)
-+.||+-.+.- ++.+|.+ |.||+.|.+..+|-. +|+.+.+++||+++|+|++.+-+.+.++|||. |.+
T Consensus 5 ~l~GHERplTqiKyN~eGDL-----lFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSA----D~t 75 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDL-----LFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSA----DQT 75 (327)
T ss_pred ccccCccccceEEecCCCcE-----EEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccc----cce
Confidence 35567777764 8888887 999999999999986 69999999999999999999999999999998 999
Q ss_pred EEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeCC------CcEEEEECCCCceeEEecccCccccccCCCCCCcc
Q 000316 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCD------GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1355 VrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~D------gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
++|||+++|+++.+++ ...+|..+.|+.++.++ ++.| +.|.++|++....- ...
T Consensus 76 ~kLWDv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~--~~s---------------- 136 (327)
T KOG0643|consen 76 AKLWDVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSD--IDS---------------- 136 (327)
T ss_pred eEEEEcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhh--hcc----------------
Confidence 9999999999999988 67889999999988876 4443 56889988743210 000
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeE-EeeCCCCcccCCCcceE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLH-LWRGEPTELGFPSLVSA 1506 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~-~l~~~~~~v~~~~~V~s 1506 (1678)
..++..+.-..+.++.+-|.|.++.+++|..||.|..||+++|..+. .-+. |...|+.
T Consensus 137 ---------------~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~------h~~~Ind 195 (327)
T KOG0643|consen 137 ---------------EEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEE------HSSKIND 195 (327)
T ss_pred ---------------cCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhh------hcccccc
Confidence 01112222222446667777789999999999999999999986543 2232 4556788
Q ss_pred EEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEE--EcC
Q 000316 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIW--DLR 1583 (1678)
Q Consensus 1507 va~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IW--Dl~ 1583 (1678)
++++ ++..++++||.|.+-++||.++-++++++. -..+|++.+ +|....++.|+.....-|= +.+
T Consensus 196 ~q~s-----------~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r 263 (327)
T KOG0643|consen 196 LQFS-----------RDRTYFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNTAAISPLLDHVILGGGQEAMDVTTTSTR 263 (327)
T ss_pred cccc-----------CCcceEEecccCccceeeeccceeeEEEee-ecccccceecccccceEEecCCceeeeeeeeccc
Confidence 8775 455799999999999999999999999998 478999999 8877767666654333222 222
Q ss_pred CCC----------CCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1584 RNW----------PSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1584 ~~~----------~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
.++ .+.+...+||-++|+ +|+|+|+..+||+.|| |++.-..
T Consensus 264 ~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 264 AGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred ccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 232 133456789999999 5999999999999999 9988764
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.3e-25 Score=242.22 Aligned_cols=277 Identities=18% Similarity=0.261 Sum_probs=224.2
Q ss_pred cccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEE--------ecCCccEEEEeecCCCCcEEeC--CCc
Q 000316 1325 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY--------YGHEEVVNDICVLSSSGRIASC--DGT 1394 (1678)
Q Consensus 1325 gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l--------~gH~~~V~sV~fs~~~~~laS~--Dgt 1394 (1678)
|....+.|..|||||++|+|||. ||.|.+||..+|+..+.+ --|.++|.|++|+.+..++||+ ||.
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSv----DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGk 286 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSV----DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGK 286 (508)
T ss_pred ccccchhheeeCCCCceEeeccc----cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCc
Confidence 45677899999999999999998 999999999999765533 3488999999999999999665 999
Q ss_pred EEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECC
Q 000316 1395 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1474 (1678)
Q Consensus 1395 VrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~D 1474 (1678)
|++|.+++|.|++.|... |+ ..++|+.|+.|+..+++++.|
T Consensus 287 IKvWri~tG~ClRrFdrA-----------------------------Ht----------kGvt~l~FSrD~SqiLS~sfD 327 (508)
T KOG0275|consen 287 IKVWRIETGQCLRRFDRA-----------------------------HT----------KGVTCLSFSRDNSQILSASFD 327 (508)
T ss_pred EEEEEEecchHHHHhhhh-----------------------------hc----------cCeeEEEEccCcchhhccccc
Confidence 999999999999888732 11 236788888889999999999
Q ss_pred CcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe--c
Q 000316 1475 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--A 1552 (1678)
Q Consensus 1475 gtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~--g 1552 (1678)
.++|+--+.+|++++.++||. +.|+...|. ++|+.++++|+||+|++|+.++++++.+++ +
T Consensus 328 ~tvRiHGlKSGK~LKEfrGHs------Syvn~a~ft-----------~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~ 390 (508)
T KOG0275|consen 328 QTVRIHGLKSGKCLKEFRGHS------SYVNEATFT-----------DDGHHIISASSDGTVKVWHGKTTECLSTFKPLG 390 (508)
T ss_pred ceEEEeccccchhHHHhcCcc------ccccceEEc-----------CCCCeEEEecCCccEEEecCcchhhhhhccCCC
Confidence 999999999999999999764 456665553 566899999999999999999999999998 4
Q ss_pred cCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecC----CCCEE-EEEecCCEEEEEeCCC-eEEEecC
Q 000316 1553 HDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH----TNGIS-GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1553 H~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH----~~~V~-afSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
.+-+|++|. .| +...++.|...++|.|-++.. +.+..+..- .+-|. ++||.|.++...+.|+ ++.|++.
T Consensus 391 ~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG---QvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~ 467 (508)
T KOG0275|consen 391 TDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG---QVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVL 467 (508)
T ss_pred CcccceeEEEcCCCCceEEEEcCCCeEEEEeccc---eEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEee
Confidence 567889988 44 456889999999999998864 233333221 12345 4999999999999999 8999875
Q ss_pred CCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1625 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1625 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
. | ++..... -|...|-.++-+|...++|+=++||.+++|-
T Consensus 468 s-----G-------~LE~tl~--VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 468 S-----G-------KLERTLP--VHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred c-----C-------ceeeeee--cccccccccccCcccchhhhhcccchhhhcC
Confidence 1 1 2211111 2666788899999999999999999999993
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=280.48 Aligned_cols=197 Identities=14% Similarity=0.078 Sum_probs=154.3
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCccccee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 241 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~l~ 241 (1678)
++++.+.|.+|+|+.||+|++. ..+..+|+|++... .+... +.++ +||++|+.|+ |+|||.++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~------~~~~~~AlKrm~~~--de~~L-~~v~-------~EI~~MK~L~gh~nIV~yi 101 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDV------KGGKKYALKRMYVN--DEEAL-NAVK-------REIDIMKLLSGHKNIVSYI 101 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEec------CCCceeeeeeeecC--CHHHH-HHHH-------HHHHHHHHhcCCCceeeEe
Confidence 6789999999999999999965 33488999998753 33333 3333 9999999997 99999999
Q ss_pred eEEE-e---C---CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCCeEecC
Q 000316 242 GLLK-T---S---GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD 311 (1678)
Q Consensus 242 ~~~~-~---~---~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHRDLKP~NILl~~ 311 (1678)
|... . . -.++|.||||. |.|-+++..+....|+|.++..|++|+++||.+||... |||||||-|||||+.
T Consensus 102 dss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~ 181 (738)
T KOG1989|consen 102 DSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA 181 (738)
T ss_pred ccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC
Confidence 9322 1 1 25789999999 59999998766666999999999999999999999987 999999999999999
Q ss_pred CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc---ccccccccccccccCccc
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~y~~~~d~W~~G~is 379 (1678)
+| +.||||||.|............ . ..-.-.-....|+.|+|||++ .+.+.+.+.|+|..|||.
T Consensus 182 ~g--~~KLCDFGSatt~~~~~~~~~e-~-~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL 248 (738)
T KOG1989|consen 182 DG--NYKLCDFGSATTKILSPTSAQE-V-NYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL 248 (738)
T ss_pred CC--CEEeCcccccccccCCCccHHH-H-HHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH
Confidence 99 9999999999753321110000 0 000000012368999999965 588999999999999986
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-24 Score=251.37 Aligned_cols=189 Identities=13% Similarity=0.127 Sum_probs=158.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||++.+. .++..+|+|.++.... ......+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 65 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHV------NSDQKYAMKEIRLPKS-SSAVEDSR--------KEAVLLAKMKHPNIVAFKE 65 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEc------CCCceEEEEEEEcCcc-hHHHHHHH--------HHHHHHHhCCCCCcceEEE
Confidence 5899999999999999999965 4678899999865322 22233333 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
.+.+++.+|+||||+++ +|.+++.......+++..++.++.||+.||.|||++||+|+||||+||++++++ .++|+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~--~~~l~d 143 (255)
T cd08219 66 SFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG--KVKLGD 143 (255)
T ss_pred EEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC--cEEEcc
Confidence 99999999999999985 999998755556689999999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+++....... ......+++.|+|||++.+..++.++|+|+.|.+.
T Consensus 144 fg~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~ 190 (255)
T cd08219 144 FGSARLLTSPGA-----------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCIL 190 (255)
T ss_pred cCcceeeccccc-----------ccccccCCccccCHHHHccCCcCchhhhhhhchhh
Confidence 999875432110 11123478889999999998999999999999553
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-25 Score=280.80 Aligned_cols=195 Identities=15% Similarity=0.102 Sum_probs=148.6
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEE--------------EeccC-CcChHHHHHHHHhcCCCchh
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLN--------------LLIEG-KASGQESKNFLRLIGVPSFD 224 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK--------------~i~~~-~~~~~~~~~~l~~~~~~~~~ 224 (1678)
..++|+++++||+|+||+||+|..+.. .+..++.| .+.+. .........+. +
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~--------~ 212 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRAS-----TEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLE--------N 212 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEecc-----chhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHH--------H
Confidence 356899999999999999999875421 11112222 11110 01111112222 8
Q ss_pred HHHhhccCCCCcccceeeEEEeCCeEEEeccCCCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 000316 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 301 (1678)
Q Consensus 225 Ei~iL~~l~HpNIV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRD 301 (1678)
|+.+|+.++|||||++++++...+..|+|||++.++|.+++.... ......+.++.++.||+.||.|||++||||||
T Consensus 213 Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrD 292 (501)
T PHA03210 213 EILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRD 292 (501)
T ss_pred HHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 999999999999999999999999999999999999988876321 22345677889999999999999999999999
Q ss_pred CCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 302 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 302 LKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+|||++.++ .+||+|||+++........ ......||..|+|||++.+..|+.++|+|+.|++.
T Consensus 293 LKP~NILl~~~~--~vkL~DFGla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 358 (501)
T PHA03210 293 IKLENIFLNCDG--KIVLGDFGTAMPFEKEREA----------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLIL 358 (501)
T ss_pred CCHHHEEECCCC--CEEEEeCCCceecCccccc----------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHH
Confidence 999999999999 8999999999864321110 01123478999999999999999999999999664
|
|
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.6e-25 Score=245.22 Aligned_cols=279 Identities=21% Similarity=0.330 Sum_probs=222.0
Q ss_pred eeEEeccccccEEEEEEecCC-CEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeCCCcEE
Q 000316 1319 ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLH 1396 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg-~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVr 1396 (1678)
.+..|.||.+.|.|++=+|+. ..++|||. ||.|++||+...+|..+++.|.+.|..|++.. +..+ ++.|++|+
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~----DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~~~~tvgdDKtvK 132 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSC----DGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-TSFFTVGDDKTVK 132 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhcccc----CceEEEEehhhhhhhheeecccCceeeEEecc-cceEEecCCccee
Confidence 567789999999999999987 78999996 99999999999999999999999999999865 4444 66799999
Q ss_pred EEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCc
Q 000316 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1678)
Q Consensus 1397 IWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dgt 1476 (1678)
.|... +..++++-+.+ .+..++.+.-+..++|++. .
T Consensus 133 ~wk~~-~~p~~tilg~s-----------------------------------------~~~gIdh~~~~~~FaTcGe--~ 168 (433)
T KOG0268|consen 133 QWKID-GPPLHTILGKS-----------------------------------------VYLGIDHHRKNSVFATCGE--Q 168 (433)
T ss_pred eeecc-CCcceeeeccc-----------------------------------------cccccccccccccccccCc--e
Confidence 99876 34555544321 1222333334567787765 5
Q ss_pred EEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCC
Q 000316 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1678)
Q Consensus 1477 VrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~ 1556 (1678)
|.|||.....++..+... ...+.++.|.+... ++|++|.+|+.|.+||+|++++++.+. -+-.
T Consensus 169 i~IWD~~R~~Pv~smswG------~Dti~svkfNpvET----------sILas~~sDrsIvLyD~R~~~Pl~KVi-~~mR 231 (433)
T KOG0268|consen 169 IDIWDEQRDNPVSSMSWG------ADSISSVKFNPVET----------SILASCASDRSIVLYDLRQASPLKKVI-LTMR 231 (433)
T ss_pred eeecccccCCccceeecC------CCceeEEecCCCcc----------hheeeeccCCceEEEecccCCccceee-eecc
Confidence 999999988888887753 23477787766444 689999999999999999999887765 2344
Q ss_pred eEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCc
Q 000316 1557 VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQ 1632 (1678)
Q Consensus 1557 V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~ 1632 (1678)
-+.|+ .|++-.+++|+.|..++.+|++.-. .++...++|.+.|.+ |||.|+.++|||-|+ |+||.+...-+
T Consensus 232 TN~IswnPeafnF~~a~ED~nlY~~DmR~l~-~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S---- 306 (433)
T KOG0268|consen 232 TNTICWNPEAFNFVAANEDHNLYTYDMRNLS-RPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS---- 306 (433)
T ss_pred ccceecCccccceeeccccccceehhhhhhc-ccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcc----
Confidence 56777 8888899999999999999998863 667788999999994 999999999999999 99999752211
Q ss_pred ceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1633 HRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1633 ~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
..+|-. +..+.|.+|.|+-|.+++++||+||+||+|
T Consensus 307 -----RdiYht----kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlW 342 (433)
T KOG0268|consen 307 -----RDIYHT----KRMQHVFCVKYSMDSKYIISGSDDGNVRLW 342 (433)
T ss_pred -----hhhhhH----hhhheeeEEEEeccccEEEecCCCcceeee
Confidence 122211 234679999999999999999999999999
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-26 Score=269.78 Aligned_cols=202 Identities=19% Similarity=0.235 Sum_probs=172.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+++++..||-|+||.|-+++.+ .....+|+|++++....+....+.+. .|.+||..++.|.||+|
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~------~~~~~fAlKilkK~hIVdtkQqeHv~-------sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVN------SQKATFALKILKKKHIVDTKQQEHVF-------SERNIMMECRSDFIVRL 485 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEec------ccchHHHHHHHhHhhccchhHHHHHH-------hHHHHHHhcCchHHHHH
Confidence 567899999999999999999854 22336899999987777766666653 99999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
|-.|.++.++|++||-|- |+|-.+++ .++.|.+..+++|+..+++|++|||++|||+|||||||+|++.+| .+||
T Consensus 486 YrTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G--y~KL 561 (732)
T KOG0614|consen 486 YRTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG--YLKL 561 (732)
T ss_pred HHHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC--ceEE
Confidence 999999999999999887 59999999 678899999999999999999999999999999999999999999 7999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccC
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
.|||+|+......++ -+-| |||.|.|||++.++..+.++|.|+.|.+ .||.|+.-.+|+|
T Consensus 562 VDFGFAKki~~g~KT------wTFc------GTpEYVAPEIILnKGHD~avDyWaLGIl-i~ELL~G~pPFs~ 621 (732)
T KOG0614|consen 562 VDFGFAKKIGSGRKT------WTFC------GTPEYVAPEIILNKGHDRAVDYWALGIL-IYELLTGSPPFSG 621 (732)
T ss_pred eehhhHHHhccCCce------eeec------CCcccccchhhhccCcchhhHHHHHHHH-HHHHHcCCCCCCC
Confidence 999999976633222 1222 7999999999999999999999999933 3565555555554
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-24 Score=269.64 Aligned_cols=198 Identities=17% Similarity=0.124 Sum_probs=156.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~ 239 (1678)
.++|++++.||+|+||.||+|.+.. .+....+..||||++.... .......++ +|+++|+.+. |||||+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~~~~~~~vavK~l~~~~-~~~~~~~~~--------~Ei~~l~~l~~HpnIv~ 105 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYG-LSRSQPVMKVAVKMLKPTA-RSSEKQALM--------SELKIMTHLGPHLNIVN 105 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcc-cCCCCCceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhcCCCCCeee
Confidence 5589999999999999999998632 1122345679999986532 222233444 8999999996 999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCC-------------------------------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSP------------------------------------------------- 269 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------- 269 (1678)
+++++.+.+.+|||||||+ |+|.++|....
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
T cd05105 106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT 185 (400)
T ss_pred EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence 9999999999999999999 59999886421
Q ss_pred ---------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000316 270 ---------------------------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1678)
Q Consensus 270 ---------------------------------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 304 (1678)
...+++..+..++.||+.||.|||++||+||||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp 265 (400)
T cd05105 186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA 265 (400)
T ss_pred cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 12467788889999999999999999999999999
Q ss_pred CCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 305 ~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++.++ .+||+|||+++......... ......++..|+|||++.+..++.++|+|+.|++.
T Consensus 266 ~Nill~~~~--~~kL~DfGla~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil 329 (400)
T cd05105 266 RNVLLAQGK--IVKICDFGLARDIMHDSNYV---------SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILL 329 (400)
T ss_pred HhEEEeCCC--EEEEEeCCcceecccccccc---------ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHH
Confidence 999999998 89999999998543211100 01112356789999999999999999999999654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.4e-24 Score=253.66 Aligned_cols=324 Identities=18% Similarity=0.198 Sum_probs=237.4
Q ss_pred EEEEeCCCCEEEEeCC---C----ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC--eEEEEEec
Q 000316 1301 LGRVGGLKDESPWKIK---A----SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--NCVSGYYG 1371 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~---~----~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg--~~l~~l~g 1371 (1678)
|.|||.||.+++|++. + ..+.+++.|++.|+.++...+|+.|+|+|. |-||++|+...+ -|+.++..
T Consensus 40 LfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~Ss----DtTVK~W~~~~~~~~c~stir~ 115 (735)
T KOG0308|consen 40 LFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASS----DTTVKVWNAHKDNTFCMSTIRT 115 (735)
T ss_pred EEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecC----CceEEEeecccCcchhHhhhhc
Confidence 9999999999999987 2 157889999999999999999999999998 999999999887 68889999
Q ss_pred CCccEEEEee-cCCCCcEEeC--CCcEEEEECCCCc--eeEEecccCccccccCCCCCCccccccccccccccCCCCCCe
Q 000316 1372 HEEVVNDICV-LSSSGRIASC--DGTLHVWNSQTGK--LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGI 1446 (1678)
Q Consensus 1372 H~~~V~sV~f-s~~~~~laS~--DgtVrIWD~~tg~--~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v 1446 (1678)
|++.|.|++. .++...+||+ |+.|.+||+++|. .+.++..-... ..+ .+...
T Consensus 116 H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~----sl~-----------------sG~k~-- 172 (735)
T KOG0308|consen 116 HKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVN----SLG-----------------SGPKD-- 172 (735)
T ss_pred ccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccc----cCC-----------------CCCcc--
Confidence 9999999998 5566666776 9999999999883 34333321100 000 01122
Q ss_pred EEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCE
Q 000316 1447 LSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1526 (1678)
Q Consensus 1447 ~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~ 1526 (1678)
.+.+++-++.|..+++|+..+.+++||.++++.+..++||+. .|+++-.. .+|..
T Consensus 173 --------siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTd------NVr~ll~~-----------dDGt~ 227 (735)
T KOG0308|consen 173 --------SIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTD------NVRVLLVN-----------DDGTR 227 (735)
T ss_pred --------ceeeeecCCcceEEEecCcccceEEeccccccceeeeecccc------ceEEEEEc-----------CCCCe
Confidence 355566666788999999999999999999999999997654 47777654 56789
Q ss_pred EEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--E
Q 000316 1527 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--F 1603 (1678)
Q Consensus 1527 LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--f 1603 (1678)
+++||+||+|++||++..+++.++..|+..|+++. +++=..+.+|+.||.|..=|+++.. .. ..+--...+|.. .
T Consensus 228 ~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~-~~-tlick~daPv~~l~~ 305 (735)
T KOG0308|consen 228 LLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPA-KS-TLICKEDAPVLKLHL 305 (735)
T ss_pred EeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCch-hh-eEeecCCCchhhhhh
Confidence 99999999999999999999999999999999999 8888899999999999999999852 12 222222334442 2
Q ss_pred EecCCEEEEEeCCC-eEEEecCCCC------CCCCcceeccceeeee---ecCC-CccCcEEEEEEecCCCEEEEEeCCC
Q 000316 1604 SVWGQDVISISNNK-IGLSSLSKSA------DEDGQHRLVPQKLYMV---DNGA-KNLSVLSSISILPFSRLFLVGTEDG 1672 (1678)
Q Consensus 1604 Spdg~~LaSgs~D~-I~vwdl~~~~------~~~g~~~~~~~kl~~~---~~g~-~h~~~I~svafsPd~~lLatgs~DG 1672 (1678)
+.+.+-+=+++.|+ |+-|...... +............... .... .....|...+...|.|.++|-..+|
T Consensus 306 ~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~g 385 (735)
T KOG0308|consen 306 HEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKDAKG 385 (735)
T ss_pred ccccCCceeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeecCCC
Confidence 22222223455566 8888754211 1111000000000000 0000 1123577788889999999999999
Q ss_pred cEEEcC
Q 000316 1673 YLRLCC 1678 (1678)
Q Consensus 1673 ~IrIwd 1678 (1678)
.+.+||
T Consensus 386 nv~lwD 391 (735)
T KOG0308|consen 386 NVALWD 391 (735)
T ss_pred CEEEEE
Confidence 999997
|
|
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-24 Score=259.38 Aligned_cols=195 Identities=18% Similarity=0.146 Sum_probs=153.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|.+.. ........||+|.++.. .......++. +|+.+++.++||||+++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~niv~~ 74 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKELREA-TSPKANKEIL--------DEAYVMASVDNPHVCRL 74 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEec--CCCccceeEEEEecccc-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 4579999999999999999998542 11122345899998643 2223334444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++... ..++|+||++ |+|.+++.. ....++...+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~-~~~~v~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~--~~kl 150 (316)
T cd05108 75 LGICLTS-TVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ--HVKI 150 (316)
T ss_pred EEEEcCC-CceeeeecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC--cEEE
Confidence 9998764 5778999998 599999984 234578889999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 151 ~DfG~a~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l 201 (316)
T cd05108 151 TDFGLAKLLGADEKEYH---------AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 201 (316)
T ss_pred ccccccccccCCCccee---------ccCCccceeecChHHhccCCCCchhhhHHHHHHH
Confidence 99999986542111100 0111235679999999999999999999999553
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.9e-24 Score=259.87 Aligned_cols=240 Identities=23% Similarity=0.403 Sum_probs=191.4
Q ss_pred eeEEec-cccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCC--------------------------------C--
Q 000316 1319 ILSSIR-AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR--------------------------------I-- 1363 (1678)
Q Consensus 1319 ~l~tl~-gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~t--------------------------------g-- 1363 (1678)
..+.+. +|.++|+++.||+||++|||||. |+.||||.+.. .
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGe----D~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGE----DGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCC----CceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 345566 89999999999999999999998 99999998643 0
Q ss_pred --------------------------eEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCceeEEecccCccc
Q 000316 1364 --------------------------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDS 1416 (1678)
Q Consensus 1364 --------------------------~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~~~~l~~~~~~~ 1416 (1678)
+++..|+||.+.|.+|.|+.++-.| +|-|+|||+|++...+|+++|..
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~H----- 408 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFSH----- 408 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEec-----
Confidence 2355678999999999997766666 55699999999999999998873
Q ss_pred cccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeec-CCCEEEEEECCCcEEEEECCCCeeeEEeeCCC
Q 000316 1417 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVVGIGNGSLRFIDINQGQKLHLWRGEP 1495 (1678)
Q Consensus 1417 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp-~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~ 1495 (1678)
++.|||++|+| |.+++++|+-||.||||++...+.+.-..
T Consensus 409 ------------------------------------ndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D--- 449 (712)
T KOG0283|consen 409 ------------------------------------NDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND--- 449 (712)
T ss_pred ------------------------------------CCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh---
Confidence 34566666666 67899999999999999998766553222
Q ss_pred CcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEecc--------CCCeEEEE-cC-CC
Q 000316 1496 TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH--------DGYVTKLA-AP-ED 1565 (1678)
Q Consensus 1496 ~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH--------~~~V~sva-sp-dg 1565 (1678)
....|+++|++ |+|+..+.|+-+|.+++|+++..+....+.-+ ...|+++. .| +.
T Consensus 450 ----l~~lITAvcy~-----------PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~ 514 (712)
T KOG0283|consen 450 ----LRDLITAVCYS-----------PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDP 514 (712)
T ss_pred ----hhhhheeEEec-----------cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCC
Confidence 23569999986 56789999999999999999988777665421 12799998 43 33
Q ss_pred CEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCC---CEEE-EEecCCEEEEEeCCC-eEEEec
Q 000316 1566 HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISG-FSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1566 ~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~---~V~a-fSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
..++..|.|..|+|+|.++. ..+..|+|+.. .+.| |+.||++|+++++|. |++|++
T Consensus 515 ~~vLVTSnDSrIRI~d~~~~--~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 515 DEVLVTSNDSRIRIYDGRDK--DLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred CeEEEecCCCceEEEeccch--hhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 35666678999999999876 45567777654 4554 999999999999999 999997
|
|
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=256.78 Aligned_cols=198 Identities=15% Similarity=0.111 Sum_probs=158.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||+|.... .+.......+|+|.+.... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~~v~~K~~~~~~-~~~~~~~~~--------~ei~~l~~l~h~~i~~~ 73 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTG-PNERLSATSVAIKTLKENA-EPKVQQEFR--------QEAELMSDLQHPNIVCL 73 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEec-CCCCcceeeEEEEecccCC-CHHHHHHHH--------HHHHHHHhcCCcccceE
Confidence 4579999999999999999998642 1122455789999986532 222233344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPN--------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~--------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 305 (1678)
++++......+++|||++ ++|.+++..... ..+++..+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~ 153 (283)
T cd05048 74 LGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAAR 153 (283)
T ss_pred EEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccc
Confidence 999999999999999998 599999974211 45788899999999999999999999999999999
Q ss_pred CeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 306 NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||++++++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|++.
T Consensus 154 Nil~~~~~--~~~L~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il 216 (283)
T cd05048 154 NCLVGEGL--TVKISDFGLSRDIYSADYYR---------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL 216 (283)
T ss_pred eEEEcCCC--cEEECCCcceeecccccccc---------ccCCCcccccccCHHHhccCcCchhhhHHHHHHHH
Confidence 99999998 89999999998543211100 01112357789999999888999999999999664
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-25 Score=282.81 Aligned_cols=206 Identities=20% Similarity=0.234 Sum_probs=157.0
Q ss_pred cccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcc
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNI 237 (1678)
.+-..+|+.++.||+|+||.||++++++ +|+.||||+|.... ......+.+ +|+.+|.+|+||||
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKl------DGr~YAIKKIpl~~-s~~~~skI~--------rEVk~LArLnHpNV 539 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKL------DGREYAIKKIPLKA-SDKLYSKIL--------REVKLLARLNHPNV 539 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecc------cchhhhhhhccCch-HHHHHHHHH--------HHHHHHhhcCCcce
Confidence 3446689999999999999999999874 89999999997653 333333333 99999999999999
Q ss_pred cceeeEEEeC----------------------------------------------------------------------
Q 000316 238 APVLGLLKTS---------------------------------------------------------------------- 247 (1678)
Q Consensus 238 V~l~~~~~~~---------------------------------------------------------------------- 247 (1678)
|++|..+...
T Consensus 540 VRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e 619 (1351)
T KOG1035|consen 540 VRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEE 619 (1351)
T ss_pred eeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcc
Confidence 9977543100
Q ss_pred -------------------------------------------------CeEEEeccCCCC-CHHHHHhhCCCCCC-CHH
Q 000316 248 -------------------------------------------------GLITSVIPKTPY-TLENILQFSPNALK-SEW 276 (1678)
Q Consensus 248 -------------------------------------------------~~~~lVmEy~~g-~L~~~l~~~~~~~l-~~~ 276 (1678)
..+||-||||+- .|.++++. +... ...
T Consensus 620 ~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~--N~~~~~~d 697 (1351)
T KOG1035|consen 620 NDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR--NHFNSQRD 697 (1351)
T ss_pred cccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh--cccchhhH
Confidence 136899999996 66666662 3332 467
Q ss_pred HHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCC---CC---cc--cccCCCCcceeecc
Q 000316 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI---AD---WC--TIPTSPMIGCCIEG 348 (1678)
Q Consensus 277 ~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~---~~---~~--~~~~~~~~~~~~~~ 348 (1678)
.+..+++||+.||.|+|++|||||||||.||++++++ .|||.|||+|+.... .. .. ........+ ..+.
T Consensus 698 ~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~--~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~-~~Ts 774 (1351)
T KOG1035|consen 698 EAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRN--SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDG-DLTS 774 (1351)
T ss_pred HHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCC--CeeecccccchhhhhhhhhHhhccCccccccCCCCc-cccc
Confidence 7889999999999999999999999999999999998 899999999997221 00 00 000111111 2345
Q ss_pred cccCccccccccccccc---ccccccccccCccchhhhH
Q 000316 349 CSSQGLYADLKLSQSMD---WHSQFNRWWRGELSNFEYL 384 (1678)
Q Consensus 349 ~~gt~~Y~APE~~~~~~---y~~~~d~W~~G~isnfeyL 384 (1678)
..||..|+|||++.+.. |+.++|+++.|.|. ||++
T Consensus 775 ~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVl-FEM~ 812 (1351)
T KOG1035|consen 775 QVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVL-FEML 812 (1351)
T ss_pred ccceeeeecHHHhcccccccccchhhhHHHHHHH-HHHh
Confidence 57899999999998665 99999999999776 7765
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=254.17 Aligned_cols=197 Identities=16% Similarity=0.183 Sum_probs=157.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|..... ....+..+|+|.+... .......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~--~~~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~niv~~ 72 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLP--GMDHAQLVAIKTLKDI-NNPQQWGEFQ--------QEASLMAELHHPNIVCL 72 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecC--CCCCcceEEEEeccCC-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 46799999999999999999985321 1245788999998753 2222333343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP---------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~---------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 304 (1678)
++++......|+||||++ ++|.+++.... ...+++..+..++.|++.||.|||++||+||||||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 152 (283)
T cd05090 73 LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAA 152 (283)
T ss_pred EEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhcccc
Confidence 999999999999999999 59999985321 23477888999999999999999999999999999
Q ss_pred CCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 305 ~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++.++ .+||+|||+++......... ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 153 ~nili~~~~--~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 216 (283)
T cd05090 153 RNILIGEQL--HVKISDLGLSREIYSADYYR---------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVL 216 (283)
T ss_pred ceEEEcCCC--cEEeccccccccccCCccee---------cccCCCccceecChHHhccCCCCchhhhHHHHHHH
Confidence 999999998 89999999998643211100 01112246679999999888899999999999654
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-24 Score=263.30 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=156.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|...- .+...+++.||+|+++... .......+. +|+.+++.+ +||||++
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~-~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~E~~~~~~l~~h~niv~ 75 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFG-IEKSASCRTVAVKMLKEGA-TASEYKALM--------TELKILIHIGHHLNVVN 75 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccc-cccccccceeeeeeccCCC-CHHHHHHHH--------HHHHHHHhhccCcchhh
Confidence 3589999999999999999997431 2233467899999986432 222233333 899999999 8999999
Q ss_pred eeeEEEeC-CeEEEeccCCCC-CHHHHHhhCCC-----------------------------------------------
Q 000316 240 VLGLLKTS-GLITSVIPKTPY-TLENILQFSPN----------------------------------------------- 270 (1678)
Q Consensus 240 l~~~~~~~-~~~~lVmEy~~g-~L~~~l~~~~~----------------------------------------------- 270 (1678)
+++++... ..++++|||+++ +|.+++.....
T Consensus 76 ~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (337)
T cd05054 76 LLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD 155 (337)
T ss_pred eeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence 99988654 578999999995 99999863211
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccC
Q 000316 271 ------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPT 338 (1678)
Q Consensus 271 ------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~ 338 (1678)
..++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~--~vkL~DfG~a~~~~~~~~~~--- 230 (337)
T cd05054 156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV--- 230 (337)
T ss_pred cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC--cEEEeccccchhcccCcchh---
Confidence 2578888999999999999999999999999999999999988 89999999998643211100
Q ss_pred CCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 339 SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 339 ~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
. .....++..|+|||++.+..++.++|+|+.|++.
T Consensus 231 --~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l 265 (337)
T cd05054 231 --R----KGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLL 265 (337)
T ss_pred --h----ccCCCCCccccCcHHhcCCCCCccccHHHHHHHH
Confidence 0 1123456789999999999999999999999664
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=252.46 Aligned_cols=198 Identities=15% Similarity=0.090 Sum_probs=156.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++-.. ....+..+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~-~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~iv~~ 74 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVV-KDEPETRVAIKTVNEAA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCC-CCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 467999999999999999999864211 12346789999986432 222333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
++++..+...++||||++ ++|.++++... ...++...+..++.|++.||.|||++|++||||||+|||+++
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 75 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC
Confidence 999999999999999999 49999997422 123567788899999999999999999999999999999999
Q ss_pred CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
++ .+||+|||+++........... ....+++.|||||++.+..++.++|+|+.|.+.
T Consensus 155 ~~--~~~l~dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 211 (277)
T cd05062 155 DF--TVKIGDFGMTRDIYETDYYRKG---------GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 211 (277)
T ss_pred CC--CEEECCCCCccccCCcceeecC---------CCCccCHhhcChhHhhcCCcCchhHHHHHHHHH
Confidence 98 8999999999854321110000 011246789999999988999999999999664
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-23 Score=258.07 Aligned_cols=242 Identities=15% Similarity=0.259 Sum_probs=195.5
Q ss_pred CCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC-----------------------------------------
Q 000316 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA----------------------------------------- 1317 (1678)
Q Consensus 1281 gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~----------------------------------------- 1317 (1678)
.|++.||+ ||+||++ ||+|+.|+.|+||.+-.
T Consensus 265 ah~gaIw~mKFS~DGKy-----LAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKY-----LASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred ccCCcEEEEEeCCCCce-----eeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 79999998 9999998 99999999999998533
Q ss_pred --------------------ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEE
Q 000316 1318 --------------------SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1678)
Q Consensus 1318 --------------------~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~ 1377 (1678)
+.+..++||.+.|.++.||.++ +|+|+|+ |+|||||++...+|++.|. |.+.|+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSM----DKTVRLWh~~~~~CL~~F~-HndfVT 413 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSM----DKTVRLWHPGRKECLKVFS-HNDFVT 413 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccc----cccEEeecCCCcceeeEEe-cCCeeE
Confidence 0145678999999999999876 8999998 9999999999999999997 999999
Q ss_pred EEeecCC-CCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCC
Q 000316 1378 DICVLSS-SGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1454 (1678)
Q Consensus 1378 sV~fs~~-~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~ 1454 (1678)
||+|+|- +.++.|+ ||.||||++...+.+.-.+. ..
T Consensus 414 cVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl-----------------------------------------~~ 452 (712)
T KOG0283|consen 414 CVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDL-----------------------------------------RD 452 (712)
T ss_pred EEEecccCCCcEeecccccceEEeecCcCeeEeehhh-----------------------------------------hh
Confidence 9999995 5556554 99999999976554422221 13
Q ss_pred ceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCC--cccCCCcceEEEeeCCCccccCcccCCCCEEEEEec
Q 000316 1455 LYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT--ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1678)
Q Consensus 1455 ~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~--~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~ 1532 (1678)
.||++++.|+|+..++|+.+|.+++|+....+....+..+.. .-.-...|+.+.|.+... ..|++.+.
T Consensus 453 lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~----------~~vLVTSn 522 (712)
T KOG0283|consen 453 LITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDP----------DEVLVTSN 522 (712)
T ss_pred hheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCC----------CeEEEecC
Confidence 578888889999999999999999999998777665543221 111122688888765332 46888899
Q ss_pred CCeEEEEeCCCCcEEEEEeccCCCeEEEE---cCCCCEEEEEeCCCcEEEEEcCC
Q 000316 1533 SGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRR 1584 (1678)
Q Consensus 1533 Dg~I~lWD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~ 1584 (1678)
|..|||+|.++.+++..++|+...-..+. +.||++++++|.|..|+||+...
T Consensus 523 DSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~ 577 (712)
T KOG0283|consen 523 DSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDS 577 (712)
T ss_pred CCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeCCC
Confidence 99999999999999999997654433333 67999999999999999999744
|
|
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-24 Score=251.60 Aligned_cols=195 Identities=15% Similarity=0.162 Sum_probs=158.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|..+.. ..+...||+|.++.. .......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~---~~~~~~vaik~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 70 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLP---GKKEIDVAIKTLKAG-SSDKQRLDFL--------TEASIMGQFDHPNIIRL 70 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccC---CCCcceEEEEEcCCC-CChHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 35799999999999999999986421 134568999998653 2333334455 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++.+...+..++||||+++ +|.+++.. ....++...+..++.|++.||.|||++||+||||||+|||+++++ .+||
T Consensus 71 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~--~~~l 147 (266)
T cd05033 71 EGVVTKSRPVMIITEYMENGSLDKFLRE-NDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (266)
T ss_pred eEEEecCCceEEEEEcCCCCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--CEEE
Confidence 9999999999999999985 99999974 334689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... . .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 148 ~dfg~~~~~~~~~~~~---~------~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l 198 (266)
T cd05033 148 SDFGLSRRLEDSEATY---T------TKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM 198 (266)
T ss_pred Cccchhhcccccccce---e------ccCCCCCccccChhhhccCCCccccchHHHHHHH
Confidence 9999998654111110 0 0011245679999999988999999999999654
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-24 Score=227.99 Aligned_cols=276 Identities=15% Similarity=0.177 Sum_probs=223.3
Q ss_pred ccccCCCCceEe--ec---CCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCC
Q 000316 1277 SNLMKCEPWFWF--PT---PAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1277 ~~l~gH~~~V~~--fS---pdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~ 1350 (1678)
++-.||+-.|-. || |+|.+ |+++|.|+.=.+-+-+ |.-+.++.||.++|++.+...|...-+|++.
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~f-----lisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaa--- 79 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYF-----LISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAA--- 79 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceE-----EEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcc---
Confidence 456688887763 55 56665 9999999987776655 7789999999999999999999999999998
Q ss_pred CCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCce-eEEecccCccccccCCCCCCcc
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL-LSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~-~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
|=+.+|||.-+|..+.+|. |...|.+++|+.+..++ ++.++-+||||++..+- ...+
T Consensus 80 -dftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~------------------ 139 (334)
T KOG0278|consen 80 -DFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEI------------------ 139 (334)
T ss_pred -cchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhh------------------
Confidence 8999999999999999887 99999999999998888 44499999999875431 1222
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sv 1507 (1678)
.++++.|..+.|.- ..+.+++++.|++||+||.++|..++++. +...|+++
T Consensus 140 ------------~ghtg~Ir~v~wc~----------eD~~iLSSadd~tVRLWD~rTgt~v~sL~-------~~s~VtSl 190 (334)
T KOG0278|consen 140 ------------SGHTGGIRTVLWCH----------EDKCILSSADDKTVRLWDHRTGTEVQSLE-------FNSPVTSL 190 (334)
T ss_pred ------------cCCCCcceeEEEec----------cCceEEeeccCCceEEEEeccCcEEEEEe-------cCCCCcce
Confidence 23455555555543 46788888999999999999999999887 34556666
Q ss_pred EeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCC
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW 1586 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~ 1586 (1678)
-++ ++|.+ ++-...+.|.+||..+-..++.++. ...|.+.. +|+...+++|+.|..++.||..++
T Consensus 191 Evs-----------~dG~i-lTia~gssV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tg- 256 (334)
T KOG0278|consen 191 EVS-----------QDGRI-LTIAYGSSVKFWDAKSFGLLKSYKM-PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTG- 256 (334)
T ss_pred eec-----------cCCCE-EEEecCceeEEeccccccceeeccC-ccccccccccCCCceEEecCcceEEEEEeccCC-
Confidence 553 33444 4555567899999999999888774 34577766 899999999999999999999998
Q ss_pred CCCCeEe-ecCCCCEEE--EEecCCEEEEEeCCC-eEEEecC
Q 000316 1587 PSQPTVF-KGHTNGISG--FSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1587 ~~~~~~l-~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
..+..+ +||-++|.| |||||...++||.|| |++|.+.
T Consensus 257 -eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 257 -EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred -ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEec
Confidence 444444 999999997 999999999999999 9999975
|
|
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=227.74 Aligned_cols=283 Identities=16% Similarity=0.295 Sum_probs=226.6
Q ss_pred cccccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCe
Q 000316 1276 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dgt 1354 (1678)
...+.||.+-||-.+.+... .+++++|.|.+.+||.++ |.|+.++.||.++|+||+|++.+.++++||. |++
T Consensus 141 vre~~GHkDGiW~Vaa~~tq---pi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG----D~t 213 (481)
T KOG0300|consen 141 VRELEGHKDGIWHVAADSTQ---PICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASG----DET 213 (481)
T ss_pred hhhhcccccceeeehhhcCC---cceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccC----Ccc
Confidence 45689999999987766543 469999999999999999 8999999999999999999999999999997 899
Q ss_pred EEEEeC------CC------------------------------C----eEEEEEecCCccEEEEeecCCCCcE--EeCC
Q 000316 1355 VQKWEL------TR------------------------------I----NCVSGYYGHEEVVNDICVLSSSGRI--ASCD 1392 (1678)
Q Consensus 1355 VrlWDl------~t------------------------------g----~~l~~l~gH~~~V~sV~fs~~~~~l--aS~D 1392 (1678)
..||.. .. | .++..++||.+.|.+..|...+..+ +|.|
T Consensus 214 aHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWD 293 (481)
T KOG0300|consen 214 AHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWD 293 (481)
T ss_pred hHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecc
Confidence 999972 10 0 2466789999999999999888876 7889
Q ss_pred CcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEE
Q 000316 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1472 (1678)
Q Consensus 1393 gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs 1472 (1678)
.|..+||+++|+.+..+.+|.....++ ..+|..+++++++
T Consensus 294 RTAnlwDVEtge~v~~LtGHd~ELtHc----------------------------------------stHptQrLVvTsS 333 (481)
T KOG0300|consen 294 RTANLWDVETGEVVNILTGHDSELTHC----------------------------------------STHPTQRLVVTSS 333 (481)
T ss_pred ccceeeeeccCceeccccCcchhcccc----------------------------------------ccCCcceEEEEec
Confidence 999999999999999999876442222 2234577889999
Q ss_pred CCCcEEEEECCCC-eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCC-cEEEEE
Q 000316 1473 GNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASW 1550 (1678)
Q Consensus 1473 ~DgtVrlWDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg-~~i~~l 1550 (1678)
.|-+.++||.+.. ..+..|+|| ...|+++.|.. +..+++|++|.+|++||+++. .++.++
T Consensus 334 rDtTFRLWDFReaI~sV~VFQGH------tdtVTS~vF~~------------dd~vVSgSDDrTvKvWdLrNMRsplATI 395 (481)
T KOG0300|consen 334 RDTTFRLWDFREAIQSVAVFQGH------TDTVTSVVFNT------------DDRVVSGSDDRTVKVWDLRNMRSPLATI 395 (481)
T ss_pred cCceeEeccchhhcceeeeeccc------ccceeEEEEec------------CCceeecCCCceEEEeeeccccCcceee
Confidence 9999999999843 345667755 45577777742 246999999999999999985 577888
Q ss_pred eccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCC--CeEeecCCCCEEE--EEec--CCEEEEEeCCC-eEEEe
Q 000316 1551 RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ--PTVFKGHTNGISG--FSVW--GQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1551 ~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~--~~~l~gH~~~V~a--fSpd--g~~LaSgs~D~-I~vwd 1622 (1678)
+ -+.+++.++ +..+..++---.+..|++||+...+... ...-.||...|.| |..+ -.-|.+|+-|+ +.=|+
T Consensus 396 R-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 396 R-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred e-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeE
Confidence 7 477899999 6666688888788899999997654221 1245789998986 4433 24578888888 88898
Q ss_pred cC
Q 000316 1623 LS 1624 (1678)
Q Consensus 1623 l~ 1624 (1678)
+.
T Consensus 475 in 476 (481)
T KOG0300|consen 475 IN 476 (481)
T ss_pred ec
Confidence 75
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-24 Score=250.03 Aligned_cols=189 Identities=15% Similarity=0.141 Sum_probs=156.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||.||+|... ++..+|+|.+..... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-------NSTKVAVKTLKPGTM---SVQAFL--------EEANLMKTLQHDKLVRL 66 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-------CCceEEEEEccCCch---hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 468999999999999999999853 456799999765322 223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+..++||||++ ++|.+++.......++...+..++.|++.||+|||+++++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l 144 (261)
T cd05072 67 YAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL--MCKI 144 (261)
T ss_pred EEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC--cEEE
Confidence 999999999999999998 5999999865556788899999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ ......++..|+|||.+....++.++|+|+.|++.
T Consensus 145 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 194 (261)
T cd05072 145 ADFGLARVIEDNEYT----------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 194 (261)
T ss_pred CCCccceecCCCcee----------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHH
Confidence 999999864321110 01112245679999999888899999999999554
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-24 Score=256.01 Aligned_cols=184 Identities=10% Similarity=0.010 Sum_probs=149.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe-
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT- 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~- 246 (1678)
..||+|++|.||+|.. ++..||||.++..........+... +|+.+|++++|||||++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--------NNKEVIIRTFKKFHKGHKVLIDITE-------NEIKNLRRIDSNNILKIYGFIIDI 90 (283)
T ss_pred eEEeeCCceEEEEEEE--------CCEEEEEEeccccccccHHHHHHHH-------HHHHHHHhcCCCCEEEEeeeEEec
Confidence 5799999999999983 5789999999765333322222222 99999999999999999999977
Q ss_pred ---CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEEEEe
Q 000316 247 ---SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 247 ---~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
...+++||||++| +|.+++. ....++......++.|++.||.|||+ .+++||||||+|||++.++ .+||+|
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~--~~kl~d 166 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLD--KEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY--KLKIIC 166 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHh--hCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC--cEEEcc
Confidence 3478999999995 9999998 34568888999999999999999998 5999999999999999999 899999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCccccccccccc--ccccccccccccCccchhhhHh
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLL 385 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~y~~~~d~W~~G~isnfeyL~ 385 (1678)
||+++...... . ...++..|+|||++.+ ..|+.++|+|+.|.+. |+.++
T Consensus 167 fg~~~~~~~~~--------~------~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil-~el~~ 217 (283)
T PHA02988 167 HGLEKILSSPP--------F------KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVL-WEIFT 217 (283)
T ss_pred cchHhhhcccc--------c------cccCcccccCHHHhhhccccccchhhhhHHHHHH-HHHHH
Confidence 99998543110 0 1236789999999976 6899999999999554 44443
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3e-24 Score=262.04 Aligned_cols=188 Identities=19% Similarity=0.243 Sum_probs=156.2
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++.+.||+|+||.||+|.+. .++..+|+|.+.+.........++. +|+.+++.++||||++
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 79 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDT------VTGQNVAIKKLSRPFQNVTHAKRAY--------RELVLMKLVNHKNIIG 79 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEEC------CCCCEEEEEecCccccChhHHHHHH--------HHHHHHHhcCCCCCcc
Confidence 4678999999999999999999965 4688999999865332333333333 8999999999999999
Q ss_pred eeeEEEeCC------eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
++++|.... ..|+||||++++|.+.+.. . +++..+..++.|++.||+|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 80 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--D--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155 (353)
T ss_pred eeeeeccCCCccccCcEEEEEeccCCCHHHHHhh--c--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence 999987543 5799999999999998872 2 88999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+++....... .....+++.|+|||++.+..++.++|+|+.|++.
T Consensus 156 --~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 207 (353)
T cd07850 156 --TLKILDFGLARTAGTSFM------------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 207 (353)
T ss_pred --CEEEccCccceeCCCCCC------------CCCCcccccccCHHHHhCCCCCCchhhHhHHHHH
Confidence 899999999985432100 1112367889999999999999999999999553
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-25 Score=251.72 Aligned_cols=201 Identities=17% Similarity=0.204 Sum_probs=166.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCC--Cc--
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PN-- 236 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~H--pN-- 236 (1678)
..+|++++.+|+|+||.|-++.+. +.+..||||+++.-.... ..+.-|+++|+++.+ ||
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~------~~~~~vAlKIik~V~kYr-----------eAa~iEi~vLqki~~~DP~g~ 150 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDR------ETKEHVALKIIKNVDKYR-----------EAALIEIEVLQKINESDPNGK 150 (415)
T ss_pred ccceehhhhhcCCcccceEEEeec------CCCceehHHHHHHHHHHh-----------hHHHHHHHHHHHHHhcCCCCc
Confidence 568999999999999999999976 458899999986421111 123379999999943 43
Q ss_pred --ccceeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 237 --VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 237 --IV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+|++.++|.-.++.|||+|.++-++++++..+...+++..+++.+.+||+.+++|||+.+++|-||||||||+.+...
T Consensus 151 ~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 151 FRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY 230 (415)
T ss_pred eEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence 889999999999999999999889999999877888999999999999999999999999999999999999853211
Q ss_pred ------------------eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccC
Q 000316 315 ------------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 315 ------------------~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G 376 (1678)
..|||+|||.|++..... +..++|..|+|||++.+.+|+..+|+|+.|
T Consensus 231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--------------s~iVsTRHYRAPEViLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--------------STIVSTRHYRAPEVILGLGWSQPCDVWSIG 296 (415)
T ss_pred EEEeccCCccceeccCCCcceEEEecCCcceeccCc--------------ceeeeccccCCchheeccCcCCccCceeee
Confidence 268999999999755321 123578999999999999999999999999
Q ss_pred ccchhhhHhhhccccCC
Q 000316 377 ELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 377 ~isnfeyL~~ln~~aGR 393 (1678)
||. +||.++.-.|.+.
T Consensus 297 CIL-~ElytG~~LFqtH 312 (415)
T KOG0671|consen 297 CIL-VELYTGETLFQTH 312 (415)
T ss_pred eEE-EEeeccceecccC
Confidence 998 6666655555543
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-24 Score=249.64 Aligned_cols=190 Identities=17% Similarity=0.175 Sum_probs=157.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.++||+|+||.||+|.++ ..+..+|+|.+.... ....++. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~~K~~~~~~---~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDT---MEVEEFL--------KEAAVMKEIKHPNLVQL 67 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEe------cCCceEEEEEecCCc---hHHHHHH--------HHHHHHHhCCCCChhhe
Confidence 346999999999999999999964 467889999986432 2233444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..++.+++||||++ ++|.+++.......+++..++.++.|++.||+|||++||+||||||+|||+++++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl 145 (263)
T cd05052 68 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKV 145 (263)
T ss_pred EEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--cEEe
Confidence 999999999999999998 5999999854555688999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... ......+..|+|||.+.+..++.++|+|+.|++.
T Consensus 146 ~df~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 195 (263)
T cd05052 146 ADFGLSRLMTGDTYTA----------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 195 (263)
T ss_pred CCCccccccccceeec----------cCCCCCccccCCHHHhccCCCCchhHHHHHHHHH
Confidence 9999998644211100 0011235679999999999999999999999554
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-24 Score=251.69 Aligned_cols=196 Identities=16% Similarity=0.193 Sum_probs=157.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|+++.. ...+..+|+|.++... .......+. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~---~~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 70 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLP---GKREIPVAIKTLKAGY-TEKQRRDFL--------SEASIMGQFDHPNIIHL 70 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecC---CCCceEEEEEECCCCC-CHHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 35799999999999999999986421 1245689999986532 222333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+++..|+||||+++ +|.+++.. ....++...+..++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~--~~~l 147 (267)
T cd05066 71 EGVVTKSKPVMIVTEYMENGSLDAFLRK-HDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL--VCKV 147 (267)
T ss_pred EEEEecCCccEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC--eEEe
Confidence 9999999999999999985 99999984 335689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++.......... . ...-.++..|+|||.+.+..++.+.|+|+.|.+.
T Consensus 148 ~dfg~~~~~~~~~~~~~--~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l 199 (267)
T cd05066 148 SDFGLSRVLEDDPEAAY--T------TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 199 (267)
T ss_pred CCCCcccccccccceee--e------cCCCccceeecCHhHhccCccCchhhhHHHHHHH
Confidence 99999986442111000 0 0011124579999999988999999999999664
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.5e-24 Score=249.11 Aligned_cols=199 Identities=19% Similarity=0.166 Sum_probs=161.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|++. .++..||+|.+........ ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCL------LDRKPVALKKVQIFEMMDAKARQDCV--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEe------CCCCEEEEEEeeccccCCHHHHHHHH--------HHHHHHHhCCCcceeee
Confidence 57999999999999999999965 4678999998865332222 223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++.+.+..++||||+++ +|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~--~~ 145 (267)
T cd08228 68 LDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC--CE
Confidence 9999999999999999995 999888642 234578999999999999999999999999999999999999998 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
+|+|||+++....... ......+++.|+|||.+.+..++.++|+|+.|.+ .+..++|+.
T Consensus 146 ~l~d~g~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~-------l~el~~g~~ 204 (267)
T cd08228 146 KLGDLGLGRFFSSKTT-----------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL-------LYEMAALQS 204 (267)
T ss_pred EECccccceeccchhH-----------HHhcCCCCccccChhhhccCCCCchhhHHHHHHH-------HHHHhcCCC
Confidence 9999999886432110 0111236788999999988889999999999944 444455554
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.4e-24 Score=247.90 Aligned_cols=187 Identities=16% Similarity=0.187 Sum_probs=154.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||++..+ ++..+|+|.+...... ..++. +|+.+|+.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-------~~~~~a~K~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-------AQIKVAIKAINEGAMS---EEDFI--------EEAKVMMKLSHPKLVQLY 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-------cCceEEEEecccCCcc---HHHHH--------HHHHHHHHCCCCCceeEE
Confidence 56899999999999999999853 3457999988654322 23344 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++...+..++||||++ |+|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05114 66 GVCTQQKPLYIVTEFMENGCLLNYLRQR-QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG--VVKVS 142 (256)
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC--eEEEC
Confidence 99999999999999998 5999998742 34588999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++........ ......++..|+|||++.+..++.++|+|+.|.+.
T Consensus 143 d~g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l 191 (256)
T cd05114 143 DFGMTRYVLDDEYT----------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLM 191 (256)
T ss_pred CCCCccccCCCcee----------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHH
Confidence 99999854321110 01112245679999999988999999999999553
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.5e-24 Score=254.99 Aligned_cols=198 Identities=15% Similarity=0.085 Sum_probs=158.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|.+.+.||+|+||.||+|.+... ....++..+|+|.++... .......+. +|+++|+.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 73 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHL-EPENDKELVAVKTLKETA-SNDARKDFE--------REAELLTNFQHENIVKF 73 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccc-cCcCCcceEEEEeecccC-CHHHHHHHH--------HHHHHHHhcCCCCchhe
Confidence 45699999999999999999985321 112456889999986532 222333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCe
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 307 (1678)
++++......++||||++| +|.+++.... ...+++..+..++.|++.||.|||++||+||||||+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~ni 153 (280)
T cd05049 74 YGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNC 153 (280)
T ss_pred eeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceE
Confidence 9999999999999999995 9999997421 23478889999999999999999999999999999999
Q ss_pred EecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 308 Ll~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+++.++ .+||+|||+++......... ......+++.|+|||++.+..++.++|+|+.|.+.
T Consensus 154 li~~~~--~~kl~d~g~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (280)
T cd05049 154 LVGYDL--VVKIGDFGMSRDVYTTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVL 214 (280)
T ss_pred EEcCCC--eEEECCcccceecccCccee---------cCCCCcccceecChhhhccCCcchhhhHHHHHHHH
Confidence 999999 99999999997543211100 01112246789999999999999999999999654
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.6e-24 Score=250.59 Aligned_cols=198 Identities=15% Similarity=0.185 Sum_probs=157.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||+|..+. .......||+|.+... .......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 70 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKL---PGKREIFVAIKTLKSG-YTEKQRRDFL--------SEASIMGQFDHPNIIHL 70 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEec---CCCCceeEEEEEcCCC-CCHHHHHHHH--------HHHHHHHhCCCcCcceE
Confidence 3468999999999999999999652 1123467999998653 2333344554 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.++...++||||+++ +|.+++.. ..+.++...++.++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~--~~kl 147 (269)
T cd05065 71 EGVVTKSRPVMIITEFMENGALDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (269)
T ss_pred EEEECCCCceEEEEecCCCCcHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC--cEEE
Confidence 9999999999999999985 99999874 345689999999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... ... .......+..|+|||.+.+..++.++|+|+.|++.
T Consensus 148 ~dfg~~~~~~~~~~~~----~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 201 (269)
T cd05065 148 SDFGLSRFLEDDTSDP----TYT--SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVM 201 (269)
T ss_pred CCCccccccccCcccc----ccc--cccCCCcceeecCHhHhccCcccchhhhhhhHHHH
Confidence 9999988543211100 000 00011124579999999999999999999999664
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.7e-22 Score=253.93 Aligned_cols=246 Identities=11% Similarity=0.063 Sum_probs=182.3
Q ss_pred EEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecC-CCEEEEEecCCCCCCeEEEEeCCCCe--------EEEEEecC
Q 000316 1303 RVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTRIN--------CVSGYYGH 1372 (1678)
Q Consensus 1303 sgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspd-g~~LaSgS~d~~~DgtVrlWDl~tg~--------~l~~l~gH 1372 (1678)
.|+.++.+++|+.. ...+..+.||.+.|.+++|+|+ +.+|+|||. |++|+|||+.++. ++..+.+|
T Consensus 49 gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~----DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSE----DLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeC----CCeEEEEECCCCCccccccccceEEeecC
Confidence 35567889999976 5578899999999999999997 789999997 9999999997642 34578899
Q ss_pred CccEEEEeecCCCCcE-E--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEe
Q 000316 1373 EEVVNDICVLSSSGRI-A--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILST 1449 (1678)
Q Consensus 1373 ~~~V~sV~fs~~~~~l-a--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv 1449 (1678)
...|.+|+|+|++..+ + +.|++|+|||+++++.+..+..
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------------------------------------- 166 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------------------------------------- 166 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec--------------------------------------
Confidence 9999999999988764 3 4599999999999876654431
Q ss_pred eecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEE
Q 000316 1450 AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAA 1529 (1678)
Q Consensus 1450 ~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~Las 1529 (1678)
+..+++++|+++|..+++++.|++|++||+++++.+.++.+|.+. +.+.++. .+++.+++.++++
T Consensus 167 ---~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~------~~s~~v~------~~~fs~d~~~IlT 231 (568)
T PTZ00420 167 ---PKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGG------KNTKNIW------IDGLGGDDNYILS 231 (568)
T ss_pred ---CCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCC------ceeEEEE------eeeEcCCCCEEEE
Confidence 112567777788999999999999999999999999999877643 2222211 1122345678888
Q ss_pred EecCC----eEEEEeCCC-CcEEEEEe--ccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE
Q 000316 1530 GLSSG----QCRLFDVRS-GNVIASWR--AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS 1601 (1678)
Q Consensus 1530 Gs~Dg----~I~lWD~~t-g~~i~~l~--gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~ 1601 (1678)
++.|+ .|+|||+++ ++++..+. .+.+.+.... .++|.++++|+.|++|++|++..+....+..+. +..++.
T Consensus 232 tG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~-s~~p~~ 310 (568)
T PTZ00420 232 TGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYK-SCSPFR 310 (568)
T ss_pred EEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccc-cCCCcc
Confidence 77664 799999995 56666554 2334444444 567889999999999999999876322222222 334444
Q ss_pred --EEEec
Q 000316 1602 --GFSVW 1606 (1678)
Q Consensus 1602 --afSpd 1606 (1678)
+|.|.
T Consensus 311 g~~f~Pk 317 (568)
T PTZ00420 311 SFGFLPK 317 (568)
T ss_pred ceEEccc
Confidence 46664
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-24 Score=247.69 Aligned_cols=193 Identities=15% Similarity=0.122 Sum_probs=154.6
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
.+|++.+.||+|+||.||++.+. .++..||+|.+....... ....+.+. +|+.+++.++||||++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~~~-------~E~~~l~~l~h~~i~~ 68 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDA------DTGRELAVKQVQFDPESPETSKEVNALE-------CEIQLLKNLLHERIVQ 68 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEc------CCCcEEEEEEeecCcCCcccHHHHHHHH-------HHHHHHHhcCCCCeee
Confidence 57999999999999999999964 567899999986432221 11122222 8999999999999999
Q ss_pred eeeEEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCcee
Q 000316 240 VLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+++++.+. ..+++||||++| +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~--~ 144 (265)
T cd06652 69 YYGCLRDPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG--N 144 (265)
T ss_pred EEeEeccCCCceEEEEEEecCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC--C
Confidence 99998764 478899999985 9999987 335578899999999999999999999999999999999999998 8
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+||+|||+++......... .. .....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 145 ~~l~Dfg~~~~~~~~~~~~--~~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 199 (265)
T cd06652 145 VKLGDFGASKRLQTICLSG--TG------MKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV 199 (265)
T ss_pred EEECcCccccccccccccc--cc------cccCCCCccccChhhhcCCCCCcchhHHHHHHHH
Confidence 9999999998543211000 00 1112367889999999888899999999999553
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-25 Score=237.51 Aligned_cols=199 Identities=16% Similarity=0.125 Sum_probs=156.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+|+-||+++. ..++..+|+|++.-.. .++.++.+ +|++..++++||||+++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~------~s~~~~YAlKkI~c~~--~~~~e~~~--------rEid~~rkf~s~~vl~l 83 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKG------LSTGHLYALKKILCHS--QEDIEEAL--------REIDNHRKFNSPNVLRL 83 (302)
T ss_pred CceEEEeeeecCCCceeeeeecc------cCcccchhhheeeccc--hHHHHHHH--------HHHHHHHhhCCcchHHH
Confidence 56899999999999999999983 3678999999986532 23334444 99999999999999999
Q ss_pred eeEEEeCC-----eEEEeccCCC-CCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC--ceecCCCCCCeEec
Q 000316 241 LGLLKTSG-----LITSVIPKTP-YTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLT 310 (1678)
Q Consensus 241 ~~~~~~~~-----~~~lVmEy~~-g~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~g--IiHRDLKP~NILl~ 310 (1678)
+++...+. ..||+++|.. |+|.+.|+.. ++..++|.++..|+.+|++||++||+.. ..||||||.|||++
T Consensus 84 ~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls 163 (302)
T KOG2345|consen 84 VDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS 163 (302)
T ss_pred HHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec
Confidence 98765433 5999999987 8999999863 3446999999999999999999999998 99999999999999
Q ss_pred CCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc---ccccccccccccCccc
Q 000316 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS---MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 311 ~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~y~~~~d~W~~G~is 379 (1678)
+++ .++|.|||.++.....-........-.-+.... .|..|+|||++.- ...+.++|+|+.||..
T Consensus 164 ~~~--~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~--Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtL 231 (302)
T KOG2345|consen 164 DSG--LPVLMDLGSATQAPIQIEGSRQALRLQEWAEER--CTIPYRAPELFNVKSHCTITERTDIWSLGCTL 231 (302)
T ss_pred CCC--ceEEEeccCccccceEeechHHHHHHHHHHHHh--CCCcccCchheecccCcccccccchhhhhHHH
Confidence 988 899999999986543211111111111111112 3678999999874 4467899999999764
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.1e-24 Score=249.63 Aligned_cols=194 Identities=16% Similarity=0.133 Sum_probs=153.1
Q ss_pred CCe-eEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y-~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++| ++++.||+|+||+||++... .....++..+|+|.++... .......+. +|+++|+.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 71 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYD--PANDGTGEMVAVKTLKREC-GQQNTSGWK--------KEINILKTLYHENIVKY 71 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEc--cccCCCCceEEEEEecccc-ChHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 455 99999999999999987632 1223467889999987542 222233444 89999999999999999
Q ss_pred eeEEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++... ..+++||||+++ +|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~ 146 (283)
T cd05080 72 KGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR--LV 146 (283)
T ss_pred EEEEecCCCceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC--cE
Confidence 9988753 468999999995 99999973 3589999999999999999999999999999999999999998 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||+++........... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l 200 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRV--------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTL 200 (283)
T ss_pred EEeecccccccCCcchhhcc--------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHH
Confidence 99999999864421111000 0112245679999999888899999999999543
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-24 Score=229.51 Aligned_cols=200 Identities=19% Similarity=0.243 Sum_probs=162.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc-cCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG-CLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~-~l~HpNIV~ 239 (1678)
.++...+..||+|+||.|-+.++. .+|.+.|+|.+... ...+..++.+ +|+.+.. ....|.+|.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~------~sg~imAvKri~~t-vn~q~q~r~L--------~dldi~~r~~~CPf~V~ 109 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHI------QSGTIMAVKRIRAT-VNSQEQKRLL--------MDLDIIMRTVDCPFTVH 109 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeec------cCCeEEEEeeehhh-cChHHHHHHH--------HhhhhhccCCCCCeEEE
Confidence 456778899999999999988865 68999999999764 3444455555 7887654 447899999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHhC-CceecCCCCCCeEecCCCcee
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~-gIiHRDLKP~NILl~~~g~~~ 316 (1678)
+||.+.....++|.||.|..+|..+.+. ..++.++|..+-.++..++.||+|||++ .|||||+||+||||+.+| +
T Consensus 110 FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G--q 187 (282)
T KOG0984|consen 110 FYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG--Q 187 (282)
T ss_pred eehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC--c
Confidence 9999999999999999999888777653 4677899999999999999999999995 899999999999999999 9
Q ss_pred EEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc----cccccccccccccCccchhhhHhhhccccC
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1678)
Q Consensus 317 lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~----~~~y~~~~d~W~~G~isnfeyL~~ln~~aG 392 (1678)
+||||||++...... ...+...+| -.|||||.+. ...|+-++|+|+.| ++.+++..+
T Consensus 188 VKiCDFGIsG~L~dS----iAkt~daGC--------kpYmaPEri~~e~n~~gY~vksDvWSLG-------ItmiElA~l 248 (282)
T KOG0984|consen 188 VKICDFGISGYLVDS----IAKTMDAGC--------KPYMAPERINPELNQKGYSVKSDVWSLG-------ITMIEMAIL 248 (282)
T ss_pred EEEcccccceeehhh----hHHHHhcCC--------CccCChhhcCcccCcccceeehhhhhhh-------hhhhhhhhc
Confidence 999999999875531 111112222 3799999875 45799999999999 677777777
Q ss_pred CCCC
Q 000316 393 RRWG 396 (1678)
Q Consensus 393 Rs~~ 396 (1678)
|-..
T Consensus 249 r~PY 252 (282)
T KOG0984|consen 249 RFPY 252 (282)
T ss_pred cccc
Confidence 7443
|
|
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.1e-24 Score=248.49 Aligned_cols=194 Identities=15% Similarity=0.123 Sum_probs=153.8
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++++.||+|+||.||+|.... ....+..+|+|.++..........++. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~---~~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 69 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQ---DDGSQLKVAVKTMKLDIHTYSEIEEFL--------SEAACMKDFDHPNVMKLIGV 69 (273)
T ss_pred CccccccCcCCCceEEEEEEec---CCCCcceEEEEEeccCcCCHHHHHHHH--------HHHHHHHhCCCCCeeeEEee
Confidence 5788999999999999998642 112457899999876544444444454 89999999999999999998
Q ss_pred EEeCCe------EEEeccCCC-CCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 244 LKTSGL------ITSVIPKTP-YTLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 244 ~~~~~~------~~lVmEy~~-g~L~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+..... .++||||++ |+|..++... ....+++..+..++.|++.||.|||++||+||||||+||+++++
T Consensus 70 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~ 149 (273)
T cd05035 70 CFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED 149 (273)
T ss_pred eccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC
Confidence 866553 799999999 5999988542 23468999999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+ .+||+|||+++......... .. ....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~---~~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il 205 (273)
T cd05035 150 M--TVCVADFGLSKKIYSGDYYR---QG------RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM 205 (273)
T ss_pred C--eEEECCccceeecccccccc---cc------ccccCCccccCHhhcccCCCCcccchHHHHHHH
Confidence 8 89999999998643211100 00 011235679999999988999999999999664
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=249.96 Aligned_cols=198 Identities=16% Similarity=0.184 Sum_probs=158.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||++...... .......+|+|.+.... ......++. +|+.+++.+ +||||++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~-~~~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~i~~ 80 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLD-NPNETSTVAVKMLKDDA-TEKDLSDLV--------SEMEMMKMIGKHKNIIN 80 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCC-CCCCceeEEEEEccCCC-CHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 457999999999999999999864211 12345789999987542 223333444 899999999 8999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 304 (1678)
+++++..++.+++||||++ |+|.+++... ....+++..+..++.|++.||.|||++||+||||||
T Consensus 81 ~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp 160 (293)
T cd05053 81 LLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAA 160 (293)
T ss_pred EEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccce
Confidence 9999999999999999998 5999999631 235688899999999999999999999999999999
Q ss_pred CCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 305 ~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++.++ .+||+|||+++........... ..-.++..|+|||.+.+..++.++|+|+.|+|.
T Consensus 161 ~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 224 (293)
T cd05053 161 RNVLVTEDH--VMKIADFGLARDIHHIDYYRKT---------TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL 224 (293)
T ss_pred eeEEEcCCC--eEEeCccccccccccccceecc---------CCCCCCccccCHHHhccCCcCcccceeehhhHH
Confidence 999999999 8999999999864421110000 001135679999999988999999999999774
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=228.41 Aligned_cols=287 Identities=17% Similarity=0.220 Sum_probs=220.0
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCC------------C------eEEEEEecCCccEEEEee
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR------------I------NCVSGYYGHEEVVNDICV 1381 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~t------------g------~~l~~l~gH~~~V~sV~f 1381 (1678)
...+..|.+++++.+|++||.+++|||. |..|+|.|++. | -.++++..|.+.|+++.|
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsa----D~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~F 180 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSA----DASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDF 180 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCC----cceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceee
Confidence 4557789999999999999999999998 89999999851 1 246788899999999999
Q ss_pred cCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEe
Q 000316 1382 LSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1459 (1678)
Q Consensus 1382 s~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v 1459 (1678)
+|....|+|+ |++|+++|...-...+.++.-. +...+.++
T Consensus 181 HPre~ILiS~srD~tvKlFDfsK~saKrA~K~~q--------------------------------------d~~~vrsi 222 (430)
T KOG0640|consen 181 HPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQ--------------------------------------DTEPVRSI 222 (430)
T ss_pred cchhheEEeccCCCeEEEEecccHHHHHHHHHhh--------------------------------------ccceeeeE
Confidence 9999988554 9999999987543322222100 01125566
Q ss_pred EeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEE
Q 000316 1460 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1539 (1678)
Q Consensus 1460 a~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lW 1539 (1678)
.++|.|.++++|..-.++++||+++.++...-... -.|...|.+|.++ +.|++.++||.||.|++|
T Consensus 223 SfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd---~qht~ai~~V~Ys-----------~t~~lYvTaSkDG~Iklw 288 (430)
T KOG0640|consen 223 SFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPD---DQHTGAITQVRYS-----------STGSLYVTASKDGAIKLW 288 (430)
T ss_pred eecCCCceEEEecCCCceeEEeccceeEeeecCcc---cccccceeEEEec-----------CCccEEEEeccCCcEEee
Confidence 66677999999999999999999998875443321 1467778888775 456799999999999999
Q ss_pred eCCCCcEEEEEe-ccCCC-eEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecC--CCCEE----E-EEecCCE
Q 000316 1540 DVRSGNVIASWR-AHDGY-VTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH--TNGIS----G-FSVWGQD 1609 (1678)
Q Consensus 1540 D~~tg~~i~~l~-gH~~~-V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH--~~~V~----a-fSpdg~~ 1609 (1678)
|--+++++.++. +|.+. |.+.. ..||++++|++.|.+|++|.+.++ +.+.++.|- ++.+. + |.....+
T Consensus 289 DGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~--R~l~~YtGAg~tgrq~~rtqAvFNhtEdy 366 (430)
T KOG0640|consen 289 DGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG--RMLKEYTGAGTTGRQKHRTQAVFNHTEDY 366 (430)
T ss_pred ccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC--ceEEEEecCCcccchhhhhhhhhcCccce
Confidence 999999999886 67654 55555 889999999999999999999999 455555543 22221 2 7777777
Q ss_pred EEEEeCCC--eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1610 VISISNNK--IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1610 LaSgs~D~--I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
++.-.... +.-||.... . ...++. .+|.+.+..+.-+|.+..|.|||+|-.+|+|
T Consensus 367 Vl~pDEas~slcsWdaRta-----d----r~~l~s----lgHn~a~R~i~HSP~~p~FmTcsdD~raRFW 423 (430)
T KOG0640|consen 367 VLFPDEASNSLCSWDARTA-----D----RVALLS----LGHNGAVRWIVHSPVEPAFMTCSDDFRARFW 423 (430)
T ss_pred EEccccccCceeeccccch-----h----hhhhcc----cCCCCCceEEEeCCCCCceeeecccceeeee
Confidence 77765433 788885321 1 012222 2599999999999999999999999999999
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-24 Score=251.13 Aligned_cols=197 Identities=14% Similarity=0.110 Sum_probs=158.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|.+.+.||+|+||.||++.+.. .....++..+|+|.+... .......+. +|+.++++++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~~~~~~~ik~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYN-LCPEQDKILVAVKTLKDA--SDNARKDFH--------REAELLTNLQHEHIVKF 72 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEecc-CCCCCcceEEEEEecCCc--CHHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 4579999999999999999998531 111235677999998653 223333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP-----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 308 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~-----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NIL 308 (1678)
++++...+.+++||||++ ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+|||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nil 152 (288)
T cd05093 73 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL 152 (288)
T ss_pred EEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEE
Confidence 999999999999999998 59999997421 234899999999999999999999999999999999999
Q ss_pred ecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 309 LTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 309 l~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+++++ .+||+|||+++........ .....+.++..|+|||++.+..++.++|+|+.|++.
T Consensus 153 i~~~~--~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il 212 (288)
T cd05093 153 VGENL--LVKIGDFGMSRDVYSTDYY---------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 212 (288)
T ss_pred EccCC--cEEeccCCccccccCCcee---------ecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 99999 8999999999854321110 011123356789999999998999999999999665
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.7e-24 Score=253.21 Aligned_cols=199 Identities=16% Similarity=0.160 Sum_probs=157.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC-CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
.++|++.+.||+|+||.||+|+..... .....+..+|+|.+... .......++. +|+.+++.+ +||||+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~i~ 84 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLV--------SEMEMMKMIGKHKNII 84 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHH--------HHHHHHHhhccCCCch
Confidence 568999999999999999999853211 12235678999998643 2223333444 899999999 899999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 303 (1678)
++++++......|+||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk 164 (304)
T cd05101 85 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164 (304)
T ss_pred heeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999999999999998 59999997421 2346778889999999999999999999999999
Q ss_pred CCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 304 P~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||++.++ .+||+|||+++......... . ...-.+++.|+|||++.+..|+.++|+|+.|.+.
T Consensus 165 p~Nili~~~~--~~kl~D~g~~~~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 229 (304)
T cd05101 165 ARNVLVTENN--VMKIADFGLARDVNNIDYYK---K------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM 229 (304)
T ss_pred cceEEEcCCC--cEEECCCccceecccccccc---c------ccCCCCCceeeCchhhccCCCCchhhHHHHHHHH
Confidence 9999999998 89999999998653211110 0 0011245679999999998999999999999654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-24 Score=264.62 Aligned_cols=231 Identities=14% Similarity=0.171 Sum_probs=193.0
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
..++.++||.|.||+|++|+-+... +....||||.++.+ ..+....+|+ .|..||.+++||||++|.|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pg---kre~~VAIKTLK~G-ytekqrrdFL--------~EAsIMGQFdHPNIIrLEG 697 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPG---KREITVAIKTLKAG-YTEKQRRDFL--------SEASIMGQFDHPNIIRLEG 697 (996)
T ss_pred heEEEEEEecccccceecccccCCC---CcceeEEEeeeccC-ccHHHHhhhh--------hhhhhcccCCCCcEEEEEE
Confidence 4568999999999999999965422 45678999999875 5556667787 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+......+.||.|||+ |.|+.+|+.+ .+.|+..+..-+++.|+.|+.||-+.|.|||||...|||++.+. .+|++|
T Consensus 698 VVTks~PvMIiTEyMENGsLDsFLR~~-DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL--vCKVsD 774 (996)
T KOG0196|consen 698 VVTKSKPVMIITEYMENGSLDSFLRQN-DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL--VCKVSD 774 (996)
T ss_pred EEecCceeEEEhhhhhCCcHHHHHhhc-CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce--EEEecc
Confidence 9999999999999999 7999999964 46699999999999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeeccccc--CcccccccccccccccccccccccCccchhhhHhhhccccCCCCCCCc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSS--QGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYT 399 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~~dl~ 399 (1678)
||++|........ .... .+| ...|.|||.+.-..+++++|+|+.|.+ +...-.+.-|+|.|++
T Consensus 775 FGLSRvledd~~~---~ytt-------~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIV-----mWEVmSyGERPYWdmS 839 (996)
T KOG0196|consen 775 FGLSRVLEDDPEA---AYTT-------LGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV-----MWEVMSYGERPYWDMS 839 (996)
T ss_pred ccceeecccCCCc---cccc-------cCCccceeecChhHhhhcccCchhhccccceE-----EEEecccCCCcccccc
Confidence 9999976543211 1111 112 356999999999999999999999955 2334457779999999
Q ss_pred CCcccceEe-cCCCCCCCCCCCcCc
Q 000316 400 FHMVMPWVI-DFSTKPDENFDSGSR 423 (1678)
Q Consensus 400 q~pv~pwv~-d~~~~~~~~~~~~~r 423 (1678)
+.-|+--|- +|..+++.++|...-
T Consensus 840 NQdVIkaIe~gyRLPpPmDCP~aL~ 864 (996)
T KOG0196|consen 840 NQDVIKAIEQGYRLPPPMDCPAALY 864 (996)
T ss_pred hHHHHHHHHhccCCCCCCCCcHHHH
Confidence 999999998 788888777776533
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-24 Score=276.27 Aligned_cols=222 Identities=18% Similarity=0.161 Sum_probs=181.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
...-++.+.||+|.||+||+|.-.-..+... ...||||.+++. ...+...+|+ +|..+|+.++|||||++
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~-~~~vaiK~l~~~-~~~~~~~~Fl--------~Ea~~m~~f~HpNiv~l 760 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVS-PIQVAVKSLKRL-SSEQEVSDFL--------KEALLMSKFDHPNIVSL 760 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCcc-ceEEEEEecccc-CCHHHHHHHH--------HHHHHHhcCCCcceeeE
Confidence 3467889999999999999999654333322 556999999774 4556677787 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP-----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~-----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
+|++.+....+|++|||+ |||..+|+..+ ...++..+...++.||++|+.||++++.|||||...|+||+...
T Consensus 761 iGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r- 839 (1025)
T KOG1095|consen 761 IGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR- 839 (1025)
T ss_pred EEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC-
Confidence 999999999999999999 59999999631 44588999999999999999999999999999999999999998
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
.+||+||||||..-...........+ =...|||||.+....++.++|+|++|.+ |..+-.+..-+
T Consensus 840 -~VKIaDFGlArDiy~~~yyr~~~~a~---------lPvkWm~PEsl~d~iFtskSDvWsFGVl-----lWEifslG~~P 904 (1025)
T KOG1095|consen 840 -VVKIADFGLARDIYDKDYYRKHGEAM---------LPVKWMPPESLKDGIFTSKSDVWSFGVL-----LWEIFSLGATP 904 (1025)
T ss_pred -cEEEcccchhHhhhhchheeccCccc---------cceecCCHHHHhhcccccccchhhhHHH-----HHHHHhCCCCC
Confidence 99999999999433222111111111 1346999999999999999999999966 55555677788
Q ss_pred CCCCcCCcccceEe
Q 000316 395 WGDYTFHMVMPWVI 408 (1678)
Q Consensus 395 ~~dl~q~pv~pwv~ 408 (1678)
|.+.++.-|+-.++
T Consensus 905 Y~~~~n~~v~~~~~ 918 (1025)
T KOG1095|consen 905 YPSRSNFEVLLDVL 918 (1025)
T ss_pred CCCcchHHHHHHHH
Confidence 99999988886444
|
|
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-24 Score=250.65 Aligned_cols=199 Identities=18% Similarity=0.187 Sum_probs=158.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCC----------ccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSG----------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~----------~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~ 230 (1678)
.++|++++.||+|+||.||+|.+....+ .......+|+|.+.... .......+. +|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~ 74 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFL--------KEVKILS 74 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHH--------HHHHHHH
Confidence 4689999999999999999998653211 11245679999987642 223333444 8999999
Q ss_pred cCCCCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q 000316 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 300 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~---------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHR 300 (1678)
.++||||+++++++..++..++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~ 154 (296)
T cd05051 75 RLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHR 154 (296)
T ss_pred hcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999985 9999997432 1268899999999999999999999999999
Q ss_pred CCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 301 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 301 DLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||||+||+++.++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|.+.
T Consensus 155 dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 222 (296)
T cd05051 155 DLATRNCLVGKNY--TIKIADFGMSRNLYSSDYYR---------VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTL 222 (296)
T ss_pred ccchhceeecCCC--ceEEccccceeecccCccee---------ecCcCCCCceecCHHHhhcCCCCccchhhhhHHHH
Confidence 9999999999998 89999999998543211110 01112356789999999888899999999999654
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.5e-23 Score=221.31 Aligned_cols=278 Identities=18% Similarity=0.216 Sum_probs=210.8
Q ss_pred EEEEEecCC-CEEEEEecC---CCCCCeEEEEeCCCCeEEEEEe--cCCccEEEEeecCCCCcE---EeCCCcEEEEECC
Q 000316 1331 RSVAVGQDE-CTVFTAGIG---PGFKGTVQKWELTRINCVSGYY--GHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQ 1401 (1678)
Q Consensus 1331 ~svafspdg-~~LaSgS~d---~~~DgtVrlWDl~tg~~l~~l~--gH~~~V~sV~fs~~~~~l---aS~DgtVrIWD~~ 1401 (1678)
.++.|||-- .+|+.+... -...|++.|-++..++-+..+. .-.+.+.+|+|+++...+ +++||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 567888842 233333210 0125899999987555554443 357889999999875543 7779999999954
Q ss_pred C-CceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1402 T-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1402 t-g~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
. ..++..+++ |..+|.++.++.. .+..++++|.|+|||+|
T Consensus 92 ~~s~Pi~~~kE------------------------------H~~EV~Svdwn~~---------~r~~~ltsSWD~TiKLW 132 (311)
T KOG0277|consen 92 MPSKPIHKFKE------------------------------HKREVYSVDWNTV---------RRRIFLTSSWDGTIKLW 132 (311)
T ss_pred CCCcchhHHHh------------------------------hhhheEEeccccc---------cceeEEeeccCCceEee
Confidence 2 234444444 4566777777764 46788899999999999
Q ss_pred ECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCC-CcEEEEEeccCCCeEE
Q 000316 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS-GNVIASWRAHDGYVTK 1559 (1678)
Q Consensus 1481 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~t-g~~i~~l~gH~~~V~s 1559 (1678)
|...++.+.++.+|.. -|...+|+|. .+++++++|.||++++||++. |+.+. +..|...+.+
T Consensus 133 ~~~r~~Sv~Tf~gh~~------~Iy~a~~sp~----------~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah~~Eil~ 195 (311)
T KOG0277|consen 133 DPNRPNSVQTFNGHNS------CIYQAAFSPH----------IPNLFASASGDGTLRLWDVRSPGKFMS-IEAHNSEILC 195 (311)
T ss_pred cCCCCcceEeecCCcc------EEEEEecCCC----------CCCeEEEccCCceEEEEEecCCCceeE-EEeccceeEe
Confidence 9999999999997543 4677777653 348999999999999999997 45554 9999999999
Q ss_pred EE--cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecC-CEEEEEeCCC-eEEEecCCCCCCCCcc
Q 000316 1560 LA--APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWG-QDVISISNNK-IGLSSLSKSADEDGQH 1633 (1678)
Q Consensus 1560 va--spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg-~~LaSgs~D~-I~vwdl~~~~~~~g~~ 1633 (1678)
+. .-+..+|+||+.|+.|++||+++-+ .++.++.||.-.|+. |||.. ..|||+|.|. +++||..+. ++..
T Consensus 196 cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~---ds~~ 271 (311)
T KOG0277|consen 196 CDWSKYNHNVLATGGVDNLVRGWDIRNLR-TPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQ---DSAI 271 (311)
T ss_pred ecccccCCcEEEecCCCceEEEEehhhcc-ccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccc---hhhh
Confidence 98 4466799999999999999999865 678899999999994 88875 5789999999 999997622 1111
Q ss_pred eeccceeeeeecCCCccCcEEEEEEecC-CCEEEEEeCCCcEEEcC
Q 000316 1634 RLVPQKLYMVDNGAKNLSVLSSISILPF-SRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1634 ~~~~~kl~~~~~g~~h~~~I~svafsPd-~~lLatgs~DG~IrIwd 1678 (1678)
..+ ..|..-|..++|++. ..++|++++|+.+.||+
T Consensus 272 -----e~~-----~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 272 -----ETV-----DHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred -----hhh-----hccceEEeccccccccCceeeecccccceeeec
Confidence 111 147788999999984 57899999999999995
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.4e-24 Score=245.29 Aligned_cols=185 Identities=16% Similarity=0.110 Sum_probs=149.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|++. .++..+|+|.+... ........+. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 65 (252)
T cd05084 1 ERIGRGNFGEVFSGRLR------ADNTPVAVKSCRET-LPPDLKAKFL--------QEARILKQYSHPNIVRLIGVCTQK 65 (252)
T ss_pred CccCcccCccEEEEEEe------cCCceEEEEecCcc-CCHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEcCC
Confidence 46999999999999964 46788999987643 2222333444 899999999999999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
...++||||+++ +|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus 66 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~ 142 (252)
T cd05084 66 QPIYIVMELVQGGDFLTFLRT-EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN--VLKISDFGMSR 142 (252)
T ss_pred CCeEEEEeeccCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC--cEEECccccCc
Confidence 999999999985 99999973 344588999999999999999999999999999999999999998 89999999987
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
......... . ......+..|+|||.+.+..++.++|+|+.|.|.
T Consensus 143 ~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 186 (252)
T cd05084 143 EEEDGVYAS---T------GGMKQIPVKWTAPEALNYGRYSSESDVWSFGILL 186 (252)
T ss_pred ccccccccc---c------CCCCCCceeecCchhhcCCCCChHHHHHHHHHHH
Confidence 533110000 0 0000124569999999988899999999999665
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=245.36 Aligned_cols=189 Identities=19% Similarity=0.160 Sum_probs=155.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. .+..||+|.++.... ...++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-------NTTPVAVKTLKPGTM---DPKDFL--------AEAQIMKKLRHPKLIQL 66 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-------CCeEEEEEeeCCCcc---cHHHHH--------HHHHHHHHCCCCCccce
Confidence 357999999999999999999853 346799999875432 223444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+..|+||||++ ++|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l 144 (261)
T cd05068 67 YAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN--ICKV 144 (261)
T ss_pred eEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC--CEEE
Confidence 999999999999999996 5999999854445689999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ .. .....+..|+|||.+.+..++.++|+|+.|.+.
T Consensus 145 ~dfg~~~~~~~~~~~-----~~-----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 194 (261)
T cd05068 145 ADFGLARVIKEDIYE-----AR-----EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILL 194 (261)
T ss_pred CCcceEEEccCCccc-----cc-----CCCcCceeccCccccccCCCCchhhHHHHHHHH
Confidence 999999865421100 00 011124579999999998999999999999554
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=251.49 Aligned_cols=198 Identities=18% Similarity=0.139 Sum_probs=159.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||++.+.. ......+..+|+|.++.... ......+. +|+.+++.+ +||||++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~~iv~ 103 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYG-LSKSDAVMKVAVKMLKPTAH-SSEREALM--------SELKIMSHLGNHENIVN 103 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEec-CCCCCceeEEEEEecCccCC-hHHHHHHH--------HHHHHHHhccCCCCcce
Confidence 4579999999999999999998531 11224567899999875422 22223343 899999999 7999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++++...+..|+||||++ |+|.++++......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 104 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~ 181 (302)
T cd05055 104 LLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK--IVK 181 (302)
T ss_pred EEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC--eEE
Confidence 9999999999999999998 5999999854444589999999999999999999999999999999999999988 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||+++........ .......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 182 l~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 233 (302)
T cd05055 182 ICDFGLARDIMNDSNY---------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 233 (302)
T ss_pred ECCCcccccccCCCce---------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence 9999999854321110 011123356789999999988999999999999654
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=247.28 Aligned_cols=198 Identities=16% Similarity=0.096 Sum_probs=157.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.++... ....+..+|+|.+.... .......+. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVV-KGEPETRVAIKTVNENA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccC-CCCcceeEEEEecCCcc-CHHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 468999999999999999999864211 12356789999986532 222333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~ 311 (1678)
++++......++||||++ |+|.+++.... ...+++..+..++.|++.||.|||++||+||||||+|||++.
T Consensus 75 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~ 154 (277)
T cd05032 75 LGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC
Confidence 999999999999999998 59999997421 223677888999999999999999999999999999999999
Q ss_pred CCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 312 ~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
++ .+||+|||+++......... . .....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 155 ~~--~~kl~dfg~~~~~~~~~~~~-~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 211 (277)
T cd05032 155 DL--TVKIGDFGMTRDIYETDYYR-K--------GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL 211 (277)
T ss_pred CC--CEEECCcccchhhccCcccc-c--------CCCCCccccccCHHHHhcCCCCcccchHHHHHHH
Confidence 99 89999999998543211100 0 0111246789999999888899999999999664
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.1e-24 Score=245.57 Aligned_cols=187 Identities=17% Similarity=0.161 Sum_probs=148.9
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
++||+|+||.||+|..+ ...++..+|+|+++..........++. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~G~~g~v~~~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~-~ 67 (257)
T cd05116 1 GELGSGNFGTVKKGMYK----MKKSEKTVAVKILKNDNNDPALKDELL--------REANVMQQLDNPYIVRMIGICE-A 67 (257)
T ss_pred CcCCCcCCcceEEeEEe----cCCCceEEEEEEccCCCCcHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEc-C
Confidence 36899999999999743 124578899999875433333334444 8999999999999999999875 4
Q ss_pred CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
+..++||||++ |+|.+++. ....+++..+..++.|++.||+|||++||+||||||.|||++.++ .+||+|||+++
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~--~~kl~Dfg~~~ 143 (257)
T cd05116 68 ESWMLVMELAELGPLNKFLQ--KNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH--YAKISDFGLSK 143 (257)
T ss_pred CCcEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC--eEEECCCcccc
Confidence 56789999999 59999997 345689999999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.......... ......++..|+|||.+....++.+.|+|+.|++.
T Consensus 144 ~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 188 (257)
T cd05116 144 ALGADENYYK--------AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLM 188 (257)
T ss_pred ccCCCCCeee--------ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHH
Confidence 6432111100 00111245789999999888899999999999654
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=243.39 Aligned_cols=189 Identities=17% Similarity=0.184 Sum_probs=157.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. .++..+++|.+...... ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~~~ 65 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDI------ATGELVAIKVIKLEPGD--DFEIIQ--------QEISMLKECRHPNIVAY 65 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEec------CCCCEEEEEEEEcCchh--hHHHHH--------HHHHHHHhCCCCChhce
Confidence 468999999999999999999964 35678999998754222 223333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+...+|++|||+++ +|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~l~~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l 142 (262)
T cd06613 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQV-TRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKL 142 (262)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC--CEEE
Confidence 9999999999999999996 99998873 235689999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccc---cccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~---~y~~~~d~W~~G~is 379 (1678)
+|||++........ ......++..|+|||++.+. .++.++|+|+.|.+.
T Consensus 143 ~d~g~~~~~~~~~~-----------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l 194 (262)
T cd06613 143 ADFGVSAQLTATIA-----------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA 194 (262)
T ss_pred Cccccchhhhhhhh-----------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHH
Confidence 99999875432110 01122467889999998877 889999999999554
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.1e-24 Score=246.54 Aligned_cols=188 Identities=16% Similarity=0.145 Sum_probs=153.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|++. ....+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-------~~~~valK~~~~~~~~---~~~~~--------~E~~~l~~l~~~~i~~~ 66 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMS---PEAFL--------QEAQVMKKLRHEKLVQL 66 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEec-------CCceEEEEecccCccC---HHHHH--------HHHHHHHhCCCCCcceE
Confidence 357999999999999999999853 2345999998753332 22344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. .+..++||||+++ +|.+++.......++...+..++.|++.||+|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~--~~~L 143 (262)
T cd05071 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 143 (262)
T ss_pred EEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC--cEEe
Confidence 99875 4568999999995 999999854445678999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||...+..++..+|+|+.|++.
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l 193 (262)
T cd05071 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (262)
T ss_pred ccCCceeecccccccc----------ccCCcccceecCHhHhccCCCCchhhHHHHHHHH
Confidence 9999997543211100 1112356679999999888999999999999654
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-24 Score=251.52 Aligned_cols=198 Identities=15% Similarity=0.155 Sum_probs=156.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.++||+|+||.||+|.+.. ......+..+|+|.+.... .......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~ 73 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFG-TAPGEQTQAVAIKTLKDKA-EGPLREEFK--------HEAMMRSRLQHPNIVCL 73 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEec-CCCCCceeEEEEEEccCCC-CHHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 3468889999999999999998542 1112356789999987532 222222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 305 (1678)
++++.+.+..++++||+++ +|.+++... ....++...+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~ 153 (283)
T cd05091 74 LGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATR 153 (283)
T ss_pred EEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 9999999999999999984 999998521 1234788889999999999999999999999999999
Q ss_pred CeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 306 NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|++.
T Consensus 154 Nil~~~~~--~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 216 (283)
T cd05091 154 NVLVFDKL--NVKISDLGLFREVYAADYYK---------LMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL 216 (283)
T ss_pred heEecCCC--ceEecccccccccccchhee---------eccCccCCccccCHHHHhcCCCCcchhHHHHHHHH
Confidence 99999988 89999999998643211110 01112356789999999888899999999999654
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=251.87 Aligned_cols=199 Identities=16% Similarity=0.135 Sum_probs=156.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC-CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
.++|.+.+.||+|+||.||+|++.-.. .....+..+|+|.+.... ......++. +|+.+++.+ +||||+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLI--------SEMEMMKMIGKHKNII 87 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHH--------HHHHHHHHhcCCCCEe
Confidence 368999999999999999999853211 112345679999987542 223333444 899999999 799999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 303 (1678)
++++++...+..|+||||++ |+|.+++.... ...++...+..++.|++.||+|||++||+|||||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 167 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 99999999999999999999 59999997532 1347888899999999999999999999999999
Q ss_pred CCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 304 P~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||++.++ .+||+|||+++......... . .....+++.|+|||.+.+..++.++|+|+.|++.
T Consensus 168 p~Nill~~~~--~~kL~dfg~a~~~~~~~~~~----~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 232 (307)
T cd05098 168 ARNVLVTEDN--VMKIADFGLARDIHHIDYYK----K-----TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL 232 (307)
T ss_pred HHheEEcCCC--cEEECCCcccccccccchhh----c-----cccCCCccceeChHHhccCCCCcHHHHHHHHHHH
Confidence 9999999998 89999999997543211000 0 0011134679999999988899999999999554
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=247.78 Aligned_cols=195 Identities=15% Similarity=0.074 Sum_probs=155.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
-|++++.||+|+||.||+|+... ....++..||+|.++... .......+. +|+.+++.++||||+++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 73 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDP--EGDNTGEQVAVKSLKPES-GGNHIADLK--------KEIEILRNLYHENIVKYKG 73 (284)
T ss_pred hhhhceecCCCCceeEEEEEEcc--CCCCccceEEEEEcCccc-cHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 47899999999999999998431 122467889999986532 222223333 8999999999999999999
Q ss_pred EEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 243 LLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 243 ~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++... ...++||||++| +|.+++... ...++...+..++.|++.||+|||++||+||||||+||+++.++ .+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~--~~~l 150 (284)
T cd05079 74 ICTEDGGNGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKI 150 (284)
T ss_pred EEecCCCCceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC--CEEE
Confidence 98875 578999999985 999999732 33578999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 151 ~dfg~~~~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 202 (284)
T cd05079 151 GDFGLTKAIETDKEYY--------TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL 202 (284)
T ss_pred CCCccccccccCccce--------eecCCCCCCccccCHHHhccCCCCccccchhhhhhh
Confidence 9999998643211110 011123467789999999888899999999999664
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-23 Score=251.76 Aligned_cols=190 Identities=18% Similarity=0.190 Sum_probs=152.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccc--eEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDC--VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~--~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNI 237 (1678)
.++|++.+.||+|+||.||+|.++ .++ ..+|+|.+... ........+. +|+.++.++ +||||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~------~~~~~~~~~ik~~~~~-~~~~~~~~~~--------~Ei~~l~~l~~h~~i 70 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNI 70 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEc------cCCceeeEEEEEeccc-CCHHHHHHHH--------HHHHHHHHhcCCCCc
Confidence 568999999999999999999964 233 34677776542 2222233343 899999999 89999
Q ss_pred cceeeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1678)
Q Consensus 238 V~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDL 302 (1678)
+++++++.+++.+|+||||++ ++|.++++... ...+++..++.++.||+.||+|||++||+||||
T Consensus 71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl 150 (303)
T cd05088 71 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDL 150 (303)
T ss_pred ceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 999999999999999999998 59999997422 235789999999999999999999999999999
Q ss_pred CCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 303 KP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||++.++ .+||+|||+++...... .. .....+..|+|||.+.+..++.+.|+|+.|.+.
T Consensus 151 kp~Nili~~~~--~~kl~dfg~~~~~~~~~------~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 213 (303)
T cd05088 151 AARNILVGENY--VAKIADFGLSRGQEVYV------KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 213 (303)
T ss_pred chheEEecCCC--cEEeCccccCcccchhh------hc------ccCCCcccccCHHHHhccCCcccccchhhhhHH
Confidence 99999999998 89999999987322100 00 001135579999999888899999999999665
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=243.83 Aligned_cols=191 Identities=20% Similarity=0.180 Sum_probs=158.4
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHH-HHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~-~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.+. .++..+|+|.++........ ...+. +|+++++.++|+||+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~ei~~l~~~~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL------LDGRVVALKKVQIFEMMDAKARQDCL--------KEIDLLKQLDHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc------CCCCEEEEEEeecccccchhhHHHHH--------HHHHHHHhCCCCCeeee
Confidence 57999999999999999999964 46789999998753333322 33333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++..++..++||||+++ +|.+++... ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~--~~ 145 (267)
T cd08224 68 LASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC--cE
Confidence 9999999999999999995 999998742 235588999999999999999999999999999999999999999 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||+++........ .....+++.|+|||.+.+..++.++|+|+.|.+.
T Consensus 146 ~l~d~~~~~~~~~~~~~-----------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 196 (267)
T cd08224 146 KLGDLGLGRFFSSKTTA-----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred EEeccceeeeccCCCcc-----------cceecCCccccCHHHhccCCCCchhcHHHHHHHH
Confidence 99999998754321100 0112367789999999998999999999999554
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-21 Score=246.12 Aligned_cols=226 Identities=19% Similarity=0.225 Sum_probs=170.9
Q ss_pred EEEEeCCCCEEEEeCCCce-e-------------EEeccccccEEEEEEec-CCCEEEEEecCCCCCCeEEEEeCCCC--
Q 000316 1301 LGRVGGLKDESPWKIKASI-L-------------SSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRI-- 1363 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~~~~-l-------------~tl~gH~~~V~svafsp-dg~~LaSgS~d~~~DgtVrlWDl~tg-- 1363 (1678)
+++++.+.....|+..|.. + ..+.||.+.|++++|+| ++++|+|||. |++|++||+.++
T Consensus 35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~----DgtIkIWdi~~~~~ 110 (493)
T PTZ00421 35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE----DGTIMGWGIPEEGL 110 (493)
T ss_pred cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC----CCEEEEEecCCCcc
Confidence 6677777777777755321 1 24789999999999999 8899999997 999999999765
Q ss_pred -----eEEEEEecCCccEEEEeecCCC-CcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccccccccc
Q 000316 1364 -----NCVSGYYGHEEVVNDICVLSSS-GRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1435 (1678)
Q Consensus 1364 -----~~l~~l~gH~~~V~sV~fs~~~-~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~ 1435 (1678)
+++..+.+|...|.+|+|+|++ ..+ ++.|++|+|||+++++.+..+..|.
T Consensus 111 ~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~---------------------- 168 (493)
T PTZ00421 111 TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHS---------------------- 168 (493)
T ss_pred ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCC----------------------
Confidence 3567889999999999999976 455 4559999999999998877665432
Q ss_pred ccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCcc
Q 000316 1436 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1678)
Q Consensus 1436 ~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~ 1515 (1678)
..+.+++|+++|..+++|+.|++|++||+++++.+.++.+|.+.. +..+.|.
T Consensus 169 ------------------~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~-----~~~~~w~----- 220 (493)
T PTZ00421 169 ------------------DQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAK-----SQRCLWA----- 220 (493)
T ss_pred ------------------CceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCc-----ceEEEEc-----
Confidence 225677777889999999999999999999999998888765321 2233333
Q ss_pred ccCcccCCCCEEEE-E---ecCCeEEEEeCCCCc-EEEEEeccCC-CeEEEE-cCCCCEEEEEe-CCCcEEEEEcCCCC
Q 000316 1516 QAGGAVASPSWIAA-G---LSSGQCRLFDVRSGN-VIASWRAHDG-YVTKLA-APEDHLLVSSS-LDKTLRIWDLRRNW 1586 (1678)
Q Consensus 1516 s~dg~~p~g~~Las-G---s~Dg~I~lWD~~tg~-~i~~l~gH~~-~V~sva-spdg~~LaSgS-~DgtI~IWDl~~~~ 1586 (1678)
+++..+++ | +.|+.|++||+++.. ++.....+.. .+.... ++++++|++|+ .|++|++||+.++.
T Consensus 221 ------~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~ 293 (493)
T PTZ00421 221 ------KRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNER 293 (493)
T ss_pred ------CCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCc
Confidence 22344554 4 347999999999764 4444443433 343444 78999888887 59999999999873
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-24 Score=253.98 Aligned_cols=209 Identities=17% Similarity=0.169 Sum_probs=163.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
...+.++||+|.||+|.+|+- .....||+|.++.. ......++|. +||++|.+|+|||||+|++
T Consensus 539 ~L~~~ekiGeGqFGEVhLCev-------eg~lkVAVK~Lr~~-a~~~~r~~F~--------kEIkiLsqLkhPNIveLvG 602 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEV-------EGPLKVAVKILRPD-ATKNARNDFL--------KEIKILSRLKHPNIVELLG 602 (807)
T ss_pred heehhhhhcCcccceeEEEEe-------cCceEEEEeecCcc-cchhHHHHHH--------HHHHHHhccCCCCeeEEEe
Confidence 678899999999999999993 23689999999875 3444456777 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++..++.+++|||||+ |||.+++..+............++.||+.|++||.+.++|||||.+.|+|++.++ ++||||
T Consensus 603 VC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~--~iKiad 680 (807)
T KOG1094|consen 603 VCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF--TIKIAD 680 (807)
T ss_pred eeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc--cEEecC
Confidence 9999999999999999 7999999865333334445566999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCCCCCCcCC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFH 401 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~~dl~q~ 401 (1678)
||++|..-.......++. .+-...|||+|-+.-.+++.++|.|..|.- -+|.++. ..-++|.+++.-
T Consensus 681 fgmsR~lysg~yy~vqgr---------~vlpiRwmawEsillgkFttaSDvWafgvT-lwE~~~~---C~e~Py~~lt~e 747 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQGR---------AVLPIRWMAWESILLGKFTTASDVWAFGVT-LWEVFML---CREQPYSQLTDE 747 (807)
T ss_pred cccccccccCCceeeecc---------eeeeeeehhHHHHHhccccchhhhhhhHHH-HHHHHHH---HhhCchhhhhHH
Confidence 999995432222111111 123457999998888899999999999933 2443332 233455554443
Q ss_pred c
Q 000316 402 M 402 (1678)
Q Consensus 402 p 402 (1678)
.
T Consensus 748 ~ 748 (807)
T KOG1094|consen 748 Q 748 (807)
T ss_pred H
Confidence 3
|
|
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-23 Score=256.35 Aligned_cols=198 Identities=17% Similarity=0.144 Sum_probs=154.4
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.+.||+|+||.||+|.+.- .....+++.||||.++... .......+. +|+.+|..+ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGA-THSEHRALM--------SELKILIHIGHHLNVVN 75 (343)
T ss_pred hhHhcccccccCCccceEEEEeecc-CCccccceeEEEEEeccCC-ChHHHHHHH--------HHHHHHHhccCCccHhh
Confidence 4689999999999999999998531 1223567899999997542 222233343 899999999 6899999
Q ss_pred eeeEEEeC-CeEEEeccCCC-CCHHHHHhhCC------------------------------------------------
Q 000316 240 VLGLLKTS-GLITSVIPKTP-YTLENILQFSP------------------------------------------------ 269 (1678)
Q Consensus 240 l~~~~~~~-~~~~lVmEy~~-g~L~~~l~~~~------------------------------------------------ 269 (1678)
+++++... ..+++|||||+ |+|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 99988654 46899999999 59999987421
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCCC
Q 000316 270 -----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 332 (1678)
Q Consensus 270 -----------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~ 332 (1678)
...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~--~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC--cEEEEecccccccccCc
Confidence 12356777888999999999999999999999999999999988 89999999998543211
Q ss_pred cccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 333 WCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
... ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 234 ~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 271 (343)
T cd05103 234 DYV---------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 271 (343)
T ss_pred chh---------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHH
Confidence 100 01112356679999999988999999999999654
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.3e-24 Score=247.39 Aligned_cols=191 Identities=19% Similarity=0.155 Sum_probs=157.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH-HHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~-~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|++. .++..+|||.+........ ...++. +|+.+++.++||||+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCL------LDGVPVALKKVQIFDLMDAKARADCI--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeec------CCCceEEEEeeeehhhhhHHHHHHHH--------HHHHHHHHccCCchhhh
Confidence 57899999999999999999964 4678999998865332222 223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++..++..++||||++| +|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (267)
T cd08229 68 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred hheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--CE
Confidence 9999999999999999995 999988732 245689999999999999999999999999999999999999998 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||+++........ .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 146 ~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il 196 (267)
T cd08229 146 KLGDLGLGRFFSSKTTA-----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLL 196 (267)
T ss_pred EECcchhhhccccCCcc-----------cccccCCcCccCHHHhcCCCccchhhHHHHHHHH
Confidence 99999998754321100 0112367889999999988899999999999554
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=239.75 Aligned_cols=270 Identities=17% Similarity=0.238 Sum_probs=214.5
Q ss_pred CCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCCc---eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeE
Q 000316 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1678)
Q Consensus 1281 gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~~---~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtV 1355 (1678)
-|.+.|.. |-++... |+||+.|..|++|+..+. .+.+|.|..++|++++|.++++.++++|. |+.+
T Consensus 173 ~h~gev~~v~~l~~sdt-----latgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~----d~~~ 243 (459)
T KOG0288|consen 173 AHEGEVHDVEFLRNSDT-----LATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASN----DKNL 243 (459)
T ss_pred ccccccceeEEccCcch-----hhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecC----CCce
Confidence 35555554 5555443 999999999999998843 68899999999999999999999999996 9999
Q ss_pred EEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccccccc
Q 000316 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1678)
Q Consensus 1356 rlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1433 (1678)
++|++...+...++.||++.|+++.|.-....+ +|.|.|||+||+..+.|.+++-..+..
T Consensus 244 r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~c------------------ 305 (459)
T KOG0288|consen 244 RLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQC------------------ 305 (459)
T ss_pred eeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccc------------------
Confidence 999999999999999999999999997666656 556999999999998887655432111
Q ss_pred ccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCC
Q 000316 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1513 (1678)
Q Consensus 1434 ~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~ 1513 (1678)
.. +.. ....+++|-.|++||+||++++.++.....+ +.|+++..+
T Consensus 306 -------------nD----------I~~--~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g-------g~vtSl~ls--- 350 (459)
T KOG0288|consen 306 -------------ND----------IVC--SISDVISGHFDKKVRFWDIRSADKTRSVPLG-------GRVTSLDLS--- 350 (459)
T ss_pred -------------cc----------eEe--cceeeeecccccceEEEeccCCceeeEeecC-------cceeeEeec---
Confidence 00 111 1346788999999999999999988877643 347777654
Q ss_pred ccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC----CCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 000316 1514 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD----GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1514 ~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~----~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
.+|.-|.+++.|.++.+.|+++.+....+.+-. ..++.+. +|++.|+++||.||.|+||++.+++
T Consensus 351 --------~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgK-- 420 (459)
T KOG0288|consen 351 --------MDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGK-- 420 (459)
T ss_pred --------cCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCce--
Confidence 455788888999999999999998888876321 2256666 9999999999999999999999994
Q ss_pred CCeEeecCCC--CEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1589 QPTVFKGHTN--GISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1589 ~~~~l~gH~~--~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
....++..+. .|++ |+|.|..+++++.++ +.+|.
T Consensus 421 lE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 421 LEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred EEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 3444444333 5875 888899999999999 99984
|
|
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=244.60 Aligned_cols=188 Identities=17% Similarity=0.170 Sum_probs=154.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||++... .+..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-------~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 64 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWR-------GQYDVAIKMIKEGSMS---EDEFI--------EEAKVMMKLSHEKLVQL 64 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEec-------CCCcEEEEEcCCCccc---HHHHH--------HHHHHHhcCCCCCeeeE
Confidence 357999999999999999999742 3446999998654322 23344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+.+++||||++ |+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~l~~~i~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 141 (256)
T cd05113 65 YGVCTKQRPIYIVTEYMSNGCLLNYLREH-GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG--CVKV 141 (256)
T ss_pred EEEEccCCCcEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--CEEE
Confidence 999999999999999998 5999999743 33689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 142 ~d~g~~~~~~~~~~~~----------~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l 191 (256)
T cd05113 142 SDFGLSRYVLDDEYTS----------SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLM 191 (256)
T ss_pred CCCccceecCCCceee----------cCCCccChhhCCHHHHhcCcccchhHHHHHHHHH
Confidence 9999998543211100 0112245679999999888899999999999553
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=246.95 Aligned_cols=194 Identities=19% Similarity=0.192 Sum_probs=152.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||+||+|++.- .+. .....||+|.+... .......++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~-~~~-~~~~~va~K~~~~~-~~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIP-DGE-NVKIPVAIKVLREN-TSPKANKEIL--------DEAYVMAGVGSPYVCRL 74 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEec-CCC-ccceEEEEEEecCC-CCHHHHHHHH--------HHHHHHHhcCCCCCceE
Confidence 4679999999999999999998541 111 11335899998653 2223333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.. ...+++|||++ |+|.+++.. ....+++..+..++.|++.||+|||++||+||||||+|||+++++ .+||
T Consensus 75 ~~~~~~-~~~~l~~~~~~~g~l~~~l~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~--~~kL 150 (279)
T cd05109 75 LGICLT-STVQLVTQLMPYGCLLDYVRE-NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN--HVKI 150 (279)
T ss_pred EEEEcC-CCcEEEEEcCCCCCHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC--cEEE
Confidence 999875 45789999998 599999973 345689999999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
+|||+++......... ......++..|+|||...+..++.++|+|+.|++
T Consensus 151 ~dfG~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 200 (279)
T cd05109 151 TDFGLARLLDIDETEY---------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVT 200 (279)
T ss_pred CCCCceeeccccccee---------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHH
Confidence 9999998654211100 0011124567999999998899999999999955
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=244.77 Aligned_cols=187 Identities=19% Similarity=0.218 Sum_probs=153.3
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|++.+.||+|+||.||+++++ .+..+|+|.+.+.... ..++. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-------~~~~~~iK~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-------GKIDVAIKMIREGAMS---EDDFI--------EEAKVMMKLSHPNLVQLY 65 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-------CCccEEEEEeccCCCC---HHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 46889999999999999999853 3467899998653322 22344 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++...+..|+||||++| +|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05059 66 GVCTKQRPIFIVTEYMANGCLLNYLRER-KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN--VVKVS 142 (256)
T ss_pred EEEcCCCceEEEEecCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC--cEEEC
Confidence 999999999999999985 999999743 34688999999999999999999999999999999999999999 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 143 dfg~~~~~~~~~~~~----------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il 191 (256)
T cd05059 143 DFGLARYVLDDQYTS----------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLM 191 (256)
T ss_pred Ccccceecccccccc----------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHH
Confidence 999998543211000 0011234579999999999999999999999554
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-24 Score=247.70 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=162.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
-++|-++..||+|+|++||+|-+- ...+.||+|+-..++....+.++... ..+.||..|.+.|.||-||++
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl------~EqRYvAvKIHqlNK~WrdEKKeNYh---KHAcREyrIHKeLDHpRIVKl 532 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDL------TEQRYVAVKIHQLNKNWRDEKKENYH---KHACREYRIHKELDHPRIVKL 532 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhccc------chhheeeEeeehhccchhhHhhhhHH---HHHHHHHhhhhccCcceeeee
Confidence 458999999999999999999853 67889999997766555444333221 246699999999999999999
Q ss_pred eeEEE-eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCCeEecCCC-ce
Q 000316 241 LGLLK-TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL--GIAHRSVCPSNVLLTDSC-WS 315 (1678)
Q Consensus 241 ~~~~~-~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--gIiHRDLKP~NILl~~~g-~~ 315 (1678)
|++|. +.+.+|-|+|||+| ||.-+++ ..+.+++.+++.|+.||+.||.||.+. .|||-||||.|||+.+.. ++
T Consensus 533 YDyfslDtdsFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacG 610 (775)
T KOG1151|consen 533 YDYFSLDTDSFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACG 610 (775)
T ss_pred eeeeeeccccceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccc
Confidence 99997 45589999999998 8988888 577899999999999999999999985 699999999999986542 25
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc-c---ccccccccccccCccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-S---MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~---~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+++.+.........+.. ..+...||.+|.+||.+. + ...+.++|+|+.|.|.
T Consensus 611 eIKITDFGLSKIMdddSy~~vdGme----LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF 674 (775)
T KOG1151|consen 611 EIKITDFGLSKIMDDDSYNSVDGME----LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF 674 (775)
T ss_pred eeEeeecchhhhccCCccCccccee----eecccCceeeecCcceeecCCCCCccccceeeEeeehhh
Confidence 8999999999987654433222221 233456899999999654 2 2357799999999775
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=246.03 Aligned_cols=188 Identities=20% Similarity=0.135 Sum_probs=145.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|... .+ .....+|+|.+... ........++ +|+.+++.++||||+++++.+.+.
T Consensus 1 ~~lg~G~fg~v~~~~~~--~~--~~~~~~~~k~~~~~-~~~~~~~~~~--------~e~~~~~~l~h~nii~~~~~~~~~ 67 (269)
T cd05042 1 DEIGNGWFGKVLLGEAH--RG--MSKARVVVKELRAS-ATPDEQLLFL--------QEVQPYRELNHPNVLQCLGQCIES 67 (269)
T ss_pred CcCCccCCceEEEEEEe--cC--CCCeEEEEeecCcc-CChHHHHHHH--------HHHHHHHhCCCCCcceEEEEECCC
Confidence 46999999999999742 11 35567899987643 2233334444 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhCCC---CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 248 GLITSVIPKTP-YTLENILQFSPN---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~~---~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
...|+||||++ |+|.+++..... ...++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~dfg 145 (269)
T cd05042 68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL--SVKIGDYG 145 (269)
T ss_pred CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC--cEEEeccc
Confidence 99999999999 599999975322 2346777889999999999999999999999999999999999 89999999
Q ss_pred CcccCCCCCcccccCCCCcceeecccccCcccccccccc-------cccccccccccccCccc
Q 000316 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-------SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-------~~~y~~~~d~W~~G~is 379 (1678)
+++.......... .....++..|+|||++. ...++.++|+|+.|++.
T Consensus 146 ~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l 199 (269)
T cd05042 146 LALEQYPEDYYIT---------KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTM 199 (269)
T ss_pred cccccccchheec---------cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHH
Confidence 9875321110000 01112456799999864 34567899999999554
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-24 Score=267.93 Aligned_cols=197 Identities=16% Similarity=0.144 Sum_probs=160.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+.+..+.||+|+||+||+|+.. ...-.++...||||.++.. ...+...+|. ||+++|..++|||||+|
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~-~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~--------REaeLla~l~H~nIVrL 554 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAY-GLLPGQDEQLVAVKALKDK-AENQARQDFR--------REAELLAELQHPNIVRL 554 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhcc-CCCCCccceehhHhhhccc-ccHHHHHHHH--------HHHHHHHhccCCCeEEE
Confidence 346778999999999999999842 1112246778999999764 4444566776 99999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCe
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NI 307 (1678)
+|++..++.+|||+|||. |||.++|+... ...++..+...|+.||+.|++||-++..|||||-..|+
T Consensus 555 lGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNC 634 (774)
T KOG1026|consen 555 LGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNC 634 (774)
T ss_pred EEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhc
Confidence 999999999999999999 89999998421 22378889999999999999999999999999999999
Q ss_pred EecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 308 Ll~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
||.++. .|||+||||+|..-..+........ .=...||+||-+...+|+..+|+|+.|.+
T Consensus 635 LVge~l--~VKIsDfGLsRdiYssDYYk~~~~t---------~lPIRWMppEsIly~kFTteSDVWs~GVv 694 (774)
T KOG1026|consen 635 LVGENL--VVKISDFGLSRDIYSSDYYKVRGNT---------LLPIRWMPPESILYGKFTTESDVWSFGVV 694 (774)
T ss_pred eeccce--EEEecccccchhhhhhhhhcccCCc---------eeeeecCCHHHhhcCcccchhhhhhhhhh
Confidence 999999 9999999999964322211111011 12456999999999999999999999966
|
|
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.1e-23 Score=246.16 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=154.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|.... -...++..||+|.+... .......+. +|+++|+.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~v~iK~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 70 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDP--LQDNTGEVVAVKKLQHS--TAEHLRDFE--------REIEILKSLQHDNIVKY 70 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecC--CcCCCCcEEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCCeeEE
Confidence 3479999999999999999997421 11246789999998653 222233444 89999999999999999
Q ss_pred eeEEEe--CCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKT--SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~--~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++.. ...+++||||++ ++|.+++... ...+++..+..++.|++.||+|||++||+||||||+||+++.++ .+
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~--~~ 147 (284)
T cd05081 71 KGVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN--RV 147 (284)
T ss_pred EEEEccCCCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC--eE
Confidence 998754 346899999998 5999999732 34578999999999999999999999999999999999999999 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||+++.......... ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 148 ~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 201 (284)
T cd05081 148 KIGDFGLTKVLPQDKEYYK--------VREPGESPIFWYAPESLTESKFSVASDVWSFGVVL 201 (284)
T ss_pred EECCCcccccccCCCccee--------ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHH
Confidence 9999999986432111000 00111234569999999988999999999999554
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=247.33 Aligned_cols=195 Identities=14% Similarity=0.112 Sum_probs=151.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|...- ........+++|.+... .......++. .|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~--~~~~~~~~~~~k~~~~~-~~~~~~~~~~--------~~~~~l~~l~h~~iv~~ 74 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIP--EGDSIKIPVAIKTIQDR-SGRQTFQEIT--------DHMLAMGSLDHAYIVRL 74 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcC--CCCceeeEEEEeecccc-cchHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 4679999999999999999998531 00011235788887532 2222223333 78889999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. ....++++||++ |+|.+++.. ....+++..+..++.||+.||.|||++|++||||||+|||++.++ .+||
T Consensus 75 ~~~~~-~~~~~~i~e~~~~gsL~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~--~~kl 150 (279)
T cd05111 75 LGICP-GASLQLVTQLSPLGSLLDHVRQ-HRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS--IVQI 150 (279)
T ss_pred EEEEC-CCccEEEEEeCCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEE
Confidence 99875 456788999998 699999974 345689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... ......++..|+|||.+.+..|+.++|+|+.|.+.
T Consensus 151 ~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 201 (279)
T cd05111 151 ADFGVADLLYPDDKKY---------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTV 201 (279)
T ss_pred cCCccceeccCCCccc---------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHH
Confidence 9999998543211100 01123466789999999988999999999999554
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=246.69 Aligned_cols=199 Identities=22% Similarity=0.272 Sum_probs=160.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++.+.||+|+||.||+|.+. .++..||+|.++...........+. +|+++++.++||||++++
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~------~~~~~v~vK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~ 66 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNK------ATGEIVAIKKFKESEDDEDVKKTAL--------REVKVLRQLRHENIVNLK 66 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeC------CCCcEEEEehhhhhcccccchhHHH--------HHHHHHHhcCCCCeeehh
Confidence 36999999999999999999964 4678999999875433322223333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+++..++..++||||+++++.+.+.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~--~~kl~d 143 (288)
T cd07833 67 EAFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCD 143 (288)
T ss_pred heEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEEe
Confidence 99999999999999999755554442 345589999999999999999999999999999999999999998 899999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccc-cccccccccccCccchhhhHhhhccccCCC
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
||+++........ ......++..|+|||++.+. .++.++|+|+.|. +.+..+.|+.
T Consensus 144 ~g~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~-------~l~~l~~g~~ 200 (288)
T cd07833 144 FGFARALRARPAS----------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGC-------IMAELLDGEP 200 (288)
T ss_pred eecccccCCCccc----------cccCcccccCCcCCchhcCCCCcCchhhHHHHHH-------HHHHHHhCCC
Confidence 9999865422110 01123467889999999887 8899999999994 4444455653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=246.27 Aligned_cols=197 Identities=14% Similarity=0.102 Sum_probs=157.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|.+.+.||+|+||.||+|++... ....++..+++|.+... .....+.+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~-~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNL-SPTKDKMLVAVKALKDP--TLAARKDFQ--------REAELLTNLQHEHIVKF 72 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeecc-CCCCcceeeEEEecCCc--cHHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 45799999999999999999985321 12245677999998642 222223343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 305 (1678)
++++...+..++||||++ ++|.+++.... ...+++..++.++.||+.||+|||++||+||||||+
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ 152 (291)
T cd05094 73 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR 152 (291)
T ss_pred EEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcc
Confidence 999999999999999998 59999997422 234788999999999999999999999999999999
Q ss_pred CeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 306 NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||++.++ .+||+|||+++......... ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 153 Nil~~~~~--~~~l~dfg~a~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 215 (291)
T cd05094 153 NCLVGANL--LVKIGDFGMSRDVYSTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL 215 (291)
T ss_pred eEEEccCC--cEEECCCCcccccCCCceee---------cCCCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence 99999999 89999999998543211100 01123357789999999999999999999999553
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=246.91 Aligned_cols=200 Identities=16% Similarity=0.062 Sum_probs=156.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+....+ ......||+|.+.... .......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~-~~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDG-DAVELQVAVKTLPESC-SEQDESDFL--------MEALIMSKFNHQNIVRL 74 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCC-CCCceeEEEEEcCCCC-CHHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 3579999999999999999999642111 1256789999886532 223334455 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN-----ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~-----~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
++++.+.+..++||||++| +|.+++..... ..+++..+..++.||+.||+|||+++++||||||+|||++.++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 75 IGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred EEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCC
Confidence 9999999999999999985 99999974321 25888999999999999999999999999999999999987542
Q ss_pred -eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 315 -SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 315 -~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
..+||+|||+++........... .....+..|+|||++.+..++.++|+|+.|+|.
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il 211 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYYRKG---------GRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL 211 (277)
T ss_pred CcceEeccCccccccCCccceecC---------CCCCccHhhCCHHHHhcCCcCchhHHHHHHHHH
Confidence 26999999999864311110000 001124579999999988999999999999664
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.9e-24 Score=245.81 Aligned_cols=183 Identities=18% Similarity=0.182 Sum_probs=152.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++.+.||+|+||.||++.. .+..+|+|.+.... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--------~~~~~~~k~~~~~~----~~~~~~--------~e~~~l~~l~~~~i~~~ 64 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 64 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--------cCCcEEEEEeCCCc----hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999999973 46779999986432 122344 89999999999999999
Q ss_pred eeEEE-eCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 241 LGLLK-TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~-~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
++++. .++..|+||||+++ +|.++++......+++..+..++.|++.||+|||++||+||||||+||++++++ .+|
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~k 142 (256)
T cd05082 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN--VAK 142 (256)
T ss_pred EEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC--cEE
Confidence 99764 55679999999985 999999854455688999999999999999999999999999999999999999 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||+++...... ....++..|+|||++.+..++.++|+|+.|++.
T Consensus 143 l~dfg~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 189 (256)
T cd05082 143 VSDFGLTKEASSTQ--------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189 (256)
T ss_pred ecCCccceeccccC--------------CCCccceeecCHHHHccCCCCchhhhHHHHHHH
Confidence 99999988543110 011234579999999998999999999999664
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-23 Score=257.49 Aligned_cols=200 Identities=16% Similarity=0.180 Sum_probs=165.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.+.|++.+.||.|.||.||+++++ .+++..|+|+.......+++ +. .|.++|+.. .|||++.
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~------~~~~~aa~kI~~~~~d~deE----iE-------~eynil~~~~~hpnv~~ 80 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHV------KTGQLAAIKIMDPTEDEEEE----IE-------LEYNMLKKYSHHPNVAT 80 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeee------ecCceeeeEeecCCccccHH----HH-------HHHHHHHhccCCCCcce
Confidence 567999999999999999999965 57888899998664333221 11 677888877 6899999
Q ss_pred eeeEEEe-----CCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 240 VLGLLKT-----SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~-----~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+|++|.. ++.++||||||. |+.-|+++...+..+.|..+.+|++.++.||.|||.+.++|||||-.|||++.++
T Consensus 81 fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 81 FYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA 160 (953)
T ss_pred EEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC
Confidence 9999874 458999999999 5999999987788899999999999999999999999999999999999999999
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc-----ccccccccccccCccchhhhHhhhc
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFLN 388 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-----~~y~~~~d~W~~G~isnfeyL~~ln 388 (1678)
.|||+|||++....... . ....|.|||.|||||++.. ..|+..+|.|+.| ++.+.
T Consensus 161 --~VKLvDFGvSaQldsT~-------g----rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLG-------ITaIE 220 (953)
T KOG0587|consen 161 --EVKLVDFGVSAQLDSTV-------G----RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLG-------ITAIE 220 (953)
T ss_pred --cEEEeeeeeeeeeeccc-------c----cccCcCCCcccccceeeecccCCCCCcccccchhhcc-------ceeeh
Confidence 89999999998654211 1 1223679999999999864 4478899999999 77788
Q ss_pred cccCCC-CCC
Q 000316 389 KLAGRR-WGD 397 (1678)
Q Consensus 389 ~~aGRs-~~d 397 (1678)
+-.|.+ +.|
T Consensus 221 ladG~PPl~D 230 (953)
T KOG0587|consen 221 MAEGAPPLCD 230 (953)
T ss_pred hcCCCCCccC
Confidence 888876 344
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=248.41 Aligned_cols=203 Identities=18% Similarity=0.166 Sum_probs=157.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC----------CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~ 230 (1678)
.++|++.++||+|+||.||++++.-.. ....+...+|+|.+... .......++. +|+.+|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~--------~E~~~l~ 74 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFL--------KEIKIMS 74 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHH--------HHHHHHH
Confidence 357999999999999999998642100 11124567999998753 2223333444 8999999
Q ss_pred cCCCCcccceeeEEEeCCeEEEeccCCC-CCHHHHHhhCCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCceec
Q 000316 231 CLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPN---------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 300 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~---------~~l~~~~i~~i~~qil~aL~yLH~~gIiHR 300 (1678)
.++||||+++++++...+..++||||++ ++|.+++..... ..++...+..++.|++.||+|||++||+||
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~ 154 (296)
T cd05095 75 RLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHR 154 (296)
T ss_pred hCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 9999999999999999999999999998 599999974221 236677899999999999999999999999
Q ss_pred CCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccch
Q 000316 301 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSN 380 (1678)
Q Consensus 301 DLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isn 380 (1678)
||||+|||++.++ .+||+|||+++......... ......++..|+|||...+..++.++|+|+.|++.
T Consensus 155 dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l- 222 (296)
T cd05095 155 DLATRNCLVGKNY--TIKIADFGMSRNLYSGDYYR---------IQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTL- 222 (296)
T ss_pred cCChheEEEcCCC--CEEeccCcccccccCCccee---------ccCcCcCccccCCHHHHhcCCccchhhhhHHHHHH-
Confidence 9999999999988 89999999998543211000 01112245679999988888899999999999664
Q ss_pred hhhH
Q 000316 381 FEYL 384 (1678)
Q Consensus 381 feyL 384 (1678)
|+++
T Consensus 223 ~el~ 226 (296)
T cd05095 223 WEIL 226 (296)
T ss_pred HHHH
Confidence 4433
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-23 Score=250.09 Aligned_cols=191 Identities=18% Similarity=0.159 Sum_probs=150.9
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccce
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l 240 (1678)
++|++.+.||+|+||.||+|.... ......+++|.++.. ........+. +|+.++.++ +||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~~hp~iv~~ 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKK----DGLKMNAAIKMLKEF-ASENDHRDFA--------GELEVLCKLGHHPNIINL 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecC----CCCcceeEEEEcccc-CCHHHHHHHH--------HHHHHHHhhcCCCchhhe
Confidence 579999999999999999998641 011234788887632 2222333444 899999999 79999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~ 305 (1678)
++++...+.+|+||||++ ++|.+++.... ...+++..++.++.|++.||+|||++||+||||||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~ 148 (297)
T cd05089 69 LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAAR 148 (297)
T ss_pred EEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcc
Confidence 999999999999999998 59999997422 134788999999999999999999999999999999
Q ss_pred CeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 306 NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||++.++ .+||+|||+++...... ... ....+..|+|||.+.+..++.++|+|+.|++.
T Consensus 149 Nill~~~~--~~kl~dfg~~~~~~~~~------~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il 208 (297)
T cd05089 149 NVLVGENL--ASKIADFGLSRGEEVYV------KKT------MGRLPVRWMAIESLNYSVYTTKSDVWSFGVLL 208 (297)
T ss_pred eEEECCCC--eEEECCcCCCcccccee------ccC------CCCcCccccCchhhccCCCCchhhHHHHHHHH
Confidence 99999988 89999999987422100 000 01124569999999988999999999999654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-23 Score=258.85 Aligned_cols=198 Identities=17% Similarity=0.139 Sum_probs=155.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~ 239 (1678)
.++|.+.++||+|+||.||+|++.-. .....+..||+|+++.... ......+. +|+++|..+. |||||+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~-~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~E~~~l~~l~~H~niv~ 105 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGL-SHSQSTMKVAVKMLKSTAR-SSEKQALM--------SELKIMSHLGPHLNIVN 105 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCC-CCCCCceEEEEEecCCCCC-hhHHHHHH--------HHHHHHHhcCCCCCeEE
Confidence 45789999999999999999986421 1223567899999975422 22223344 8999999997 999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCC------------------------------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPN------------------------------------------------ 270 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~------------------------------------------------ 270 (1678)
+++++...+.+++|||||+ |+|.++++....
T Consensus 106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T cd05107 106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE 185 (401)
T ss_pred EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence 9999999999999999999 599999974211
Q ss_pred ------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCC
Q 000316 271 ------------------------------------------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1678)
Q Consensus 271 ------------------------------------------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDL 302 (1678)
..++...+..++.||+.||.|||+++|+||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl 265 (401)
T cd05107 186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL 265 (401)
T ss_pred ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence 23566778889999999999999999999999
Q ss_pred CCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 303 KP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+|||++.++ .+||+|||+++......... . .....+++.|||||.+.+..++.++|+|+.|.+.
T Consensus 266 kp~NiLl~~~~--~~kL~DfGla~~~~~~~~~~----~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil 331 (401)
T cd05107 266 AARNVLICEGK--LVKICDFGLARDIMRDSNYI----S-----KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILL 331 (401)
T ss_pred CcceEEEeCCC--EEEEEecCcceecccccccc----c-----CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHH
Confidence 99999999988 89999999998543211100 0 0011256789999999988899999999999553
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-23 Score=232.47 Aligned_cols=282 Identities=17% Similarity=0.214 Sum_probs=217.7
Q ss_pred ccccccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCC
Q 000316 1275 ATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1275 ~~~~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~Dg 1353 (1678)
+.-.+.||.+-|.++..+... ...++|||.||.|++||+. ..++.+++.|.|.|+.+++.. ..++|+|+ |+
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~--ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgd----DK 129 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNK--LSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGD----DK 129 (433)
T ss_pred chhhccccccccchhhcCcch--hhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecC----Cc
Confidence 345678999999986544321 1238999999999999999 568999999999999999998 57888887 89
Q ss_pred eEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccccccc
Q 000316 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1678)
Q Consensus 1354 tVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1433 (1678)
+|+.|.++- ..+.++-| ...+..|.-+..+..+++|...|.|||.+...+++.+.-
T Consensus 130 tvK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smsw---------------------- 185 (433)
T KOG0268|consen 130 TVKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSW---------------------- 185 (433)
T ss_pred ceeeeeccC-Ccceeeec-cccccccccccccccccccCceeeecccccCCccceeec----------------------
Confidence 999999764 46666653 556777776666777799999999999987776665542
Q ss_pred ccccccCCCCCCeEEeeecCCceeEeEeecCC-CEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1434 ~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g-~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
..+.+.++.++|.. ..|++|+.|++|.+||++++.+++...- ...-+.|||.|
T Consensus 186 ------------------G~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~-------~mRTN~IswnP- 239 (433)
T KOG0268|consen 186 ------------------GADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVIL-------TMRTNTICWNP- 239 (433)
T ss_pred ------------------CCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeee-------eccccceecCc-
Confidence 22224444444443 4567788999999999999998876542 22235677764
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCC
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP 1590 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg-~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1590 (1678)
. +-.+++|++|..++.||+|.. .++...++|...|.+|+ +|.|+-++|||.|++|+||.++.+....+
T Consensus 240 e----------afnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdi 309 (433)
T KOG0268|consen 240 E----------AFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDI 309 (433)
T ss_pred c----------ccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhh
Confidence 2 246889999999999999975 57888899999999999 99999999999999999999988754333
Q ss_pred eEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCC
Q 000316 1591 TVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1591 ~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~ 1625 (1678)
+. .-....|.+ ||.|.++++|||+|+ |++|...+
T Consensus 310 Yh-tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 310 YH-TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred hh-HhhhheeeEEEEeccccEEEecCCCcceeeeecch
Confidence 21 111234554 999999999999999 99999653
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=243.18 Aligned_cols=189 Identities=17% Similarity=0.146 Sum_probs=156.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. ++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-------~~~~~~vK~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-------GTTKVAVKTLKPGTMS---PEAFL--------QEAQIMKKLRHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-------CCceEEEEEecCCccC---HHHHH--------HHHHHHhhCCCCCEeee
Confidence 568999999999999999999853 3467999998754332 23344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++......++||||+++ +|.+++.......++...++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~--~~~l 144 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL--VCKI 144 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC--CEEE
Confidence 9999998999999999985 999999855445789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ .......+..|+|||.+.+..++.++|+|+.|.+.
T Consensus 145 ~d~g~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il 194 (261)
T cd05034 145 ADFGLARLIEDDEYT----------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILL 194 (261)
T ss_pred Cccccceeccchhhh----------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHH
Confidence 999999854321000 00111235679999999988899999999999554
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-23 Score=244.29 Aligned_cols=188 Identities=17% Similarity=0.157 Sum_probs=153.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||+|.+. .+..+|+|.+....... ..+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~~k~~~~~~~~~---~~~~--------~E~~~l~~l~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-------GNTKVAVKTLKPGTMSP---ESFL--------EEAQIMKKLRHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-------CCceeEEEEecCCCCCH---HHHH--------HHHHHHHhcCCCceEEE
Confidence 467999999999999999999853 45669999987643322 2344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. .+..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~--~~~l 143 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL--VCKI 143 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc--eEEe
Confidence 99885 4568999999985 999999854455689999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05070 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (260)
T ss_pred CCceeeeeccCccccc----------ccCCCCCccccChHHHhcCCCcchhhhHHHHHHH
Confidence 9999998543211000 0112245679999999888899999999999554
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.4e-24 Score=245.77 Aligned_cols=188 Identities=15% Similarity=0.153 Sum_probs=154.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||.||+|.. .++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-------NGHTKVAIKSLKQGSMS---PEAFL--------AEANLMKQLQHPRLVRL 66 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-------CCCceEEEEEecCCCCc---HHHHH--------HHHHHHHhcCCcCeeeE
Confidence 45799999999999999999985 25678999998764332 23444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. .+..++||||++ ++|.+++.......++...+..++.|++.||+|||++|++||||||+||+++.++ .++|
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05067 67 YAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL--CCKI 143 (260)
T ss_pred EEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC--CEEE
Confidence 99874 457899999998 5999999865566789999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ ......++..|+|||.+....++.+.|+|+.|.+.
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05067 144 ADFGLARLIEDNEYT----------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 193 (260)
T ss_pred ccCcceeecCCCCcc----------cccCCcccccccCHHHhccCCcCcccchHHHHHHH
Confidence 999999754311100 01122346689999999988899999999999553
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-23 Score=245.12 Aligned_cols=193 Identities=16% Similarity=0.151 Sum_probs=150.0
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|.+.+.||+|+||.||+|.... ......+|+|.++...........+. +|+.+++.++||||++++++
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~ 68 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQ----DDSILKVAVKTMKIAICTRSEMEDFL--------SEAVCMKEFDHPNVMRLIGV 68 (272)
T ss_pred CccccccCcccCceEEEeEEcc----CCCeeeEEEEecccCcCCHHHHHHHH--------HHHHHHHhCCCCCcceEEEE
Confidence 3467899999999999998641 11234689999876544444444454 89999999999999999997
Q ss_pred EEeC------CeEEEeccCCC-CCHHHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 244 LKTS------GLITSVIPKTP-YTLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 244 ~~~~------~~~~lVmEy~~-g~L~~~l~~~----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+... ...++||||++ |+|.+++... ....+++..+..++.|++.||+|||++||+||||||+|||++.+
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~ 148 (272)
T cd05075 69 CLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN 148 (272)
T ss_pred EccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC
Confidence 6432 25789999998 5999887532 23447899999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+ .+||+|||+++......... . .....+++.|+|||...+..++.+.|+|+.|++.
T Consensus 149 ~--~~kl~Dfg~~~~~~~~~~~~------~---~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il 204 (272)
T cd05075 149 M--NVCVADFGLSKKIYNGDYYR------Q---GRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTM 204 (272)
T ss_pred C--CEEECCCCcccccCccccee------c---CCcccCCcccCCHHHccCCCcChHHHHHHHHHHH
Confidence 8 89999999998643211100 0 0111246689999999999999999999999654
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=247.34 Aligned_cols=196 Identities=17% Similarity=0.161 Sum_probs=154.7
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+|++.+.||+|+||.||+|.+.... .......+|+|.+.... ......++. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~-~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 70 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLK-GRAGYTTVAVKMLKENA-SSSELRDLL--------SEFNLLKQVNHPHVIKLYG 70 (290)
T ss_pred CccccccccCcCCcceEEEEEecCC-CCCcceeEEEEecCCCC-CHHHHHHHH--------HHHHHHhhCCCCCEeeEEE
Confidence 5888999999999999999864211 12344678999886532 223333444 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 299 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~----------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiH 299 (1678)
.+..++..++||||++ ++|.+++.... ...++...+..++.|++.||.|||++||+|
T Consensus 71 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH 150 (290)
T cd05045 71 ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVH 150 (290)
T ss_pred EEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 9999999999999999 59999986421 134778889999999999999999999999
Q ss_pred cCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 300 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 300 RDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||||+|||+++++ .+||+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 151 ~dikp~nill~~~~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l 219 (290)
T cd05045 151 RDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVK---------RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 219 (290)
T ss_pred hhhhhheEEEcCCC--cEEeccccccccccCccchhc---------ccCCCCCccccCHHHHccCCcchHhHHHHHHHHH
Confidence 99999999999998 899999999985432111000 0111245689999999888899999999999553
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-24 Score=261.37 Aligned_cols=191 Identities=14% Similarity=0.150 Sum_probs=158.8
Q ss_pred eEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcCh--HHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+....||+|+|-+||+|.|. .+|..||.-.++..+... ....++. .|+++|+.|+|||||++|+
T Consensus 43 k~~evLGrGafKtVYka~De------~~giEVAWnqvk~~d~~q~~~~leR~~--------~Ev~lLKsL~H~NIirfy~ 108 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDE------EEGIEVAWNQVKIRDVTQSPEELERLY--------SEVHLLKSLKHPNIIRFYD 108 (632)
T ss_pred ehhhhcccccceeeeecccc------ccchhhHHHHHhHHHhhcChHHHHHHH--------HHHHHHccCCCCceeeeee
Confidence 34678999999999999975 578888876665433322 2224444 9999999999999999999
Q ss_pred EEEeCCe--EEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC--CceecCCCCCCeEecCCCceeE
Q 000316 243 LLKTSGL--ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL--GIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 243 ~~~~~~~--~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~--gIiHRDLKP~NILl~~~g~~~l 317 (1678)
.+.+..+ +.+|.|.+. |+|..|++ +.+.++...++.|++||++||.|||++ .|||||||.+||+|+.+. +.|
T Consensus 109 SW~d~~n~~in~iTEL~TSGtLr~Y~k--k~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~-G~V 185 (632)
T KOG0584|consen 109 SWVDTDNKTINFITELFTSGTLREYRK--KHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNL-GEV 185 (632)
T ss_pred heecCCCceeeeeeecccCCcHHHHHH--HhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCc-Cce
Confidence 9998765 889999998 79999999 566788999999999999999999996 699999999999999875 499
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR 393 (1678)
||.|+|||+..... +...|.|||.|||||+.. ..|+..+|++++| .+.|++..+-
T Consensus 186 KIGDLGLAtl~r~s-------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFG-------MCmLEMvT~e 240 (632)
T KOG0584|consen 186 KIGDLGLATLLRKS-------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFG-------MCMLEMVTSE 240 (632)
T ss_pred eecchhHHHHhhcc-------------ccceeccCccccChHHHh-hhcchhhhhhhhh-------HHHHHHHhcc
Confidence 99999999865421 122367999999999998 7899999999999 6777777664
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-24 Score=233.20 Aligned_cols=211 Identities=16% Similarity=0.173 Sum_probs=166.0
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCC-CCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~-HpNIV~ 239 (1678)
.++.+.+..||.|+.|.|++++.+ .+|.+.|||.+.+.. ..++.++.+ ..+.++...+ .|.||+
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~r------s~~~iiAVK~M~rt~-Nkee~kRIL--------mDldvv~~s~dcpyIV~ 155 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFR------STGHIIAVKQMRRTG-NKEENKRIL--------MDLDVVLKSHDCPYIVQ 155 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEc------ccceEEEEEeecccC-CHHHHHHHH--------HhhhHHhhccCCCeeee
Confidence 456788999999999999999965 578999999998753 334444454 6777665554 799999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
.+|+|..+..++|.||.|...++.+++. -.++++|..+-.+...+++||.||.+ +||||||+||+|||+|+.| .+|
T Consensus 156 c~GyFi~n~dV~IcMelMs~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G--niK 232 (391)
T KOG0983|consen 156 CFGYFITNTDVFICMELMSTCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--NIK 232 (391)
T ss_pred eeeEEeeCchHHHHHHHHHHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC--CEE
Confidence 9999999999999999999888888875 35569999999999999999999998 6999999999999999999 999
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc---cccccccccccccCccchhhhHhhhccccCCCC
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~---~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~ 395 (1678)
|||||++....... ..+.. .|-+.|||||.+. ...|+-.+|+|+.| ++..+...|+..
T Consensus 233 lCDFGIsGrlvdSk----Ahtrs--------AGC~~YMaPERidp~~~~kYDiRaDVWSlG-------ITlveLaTg~yP 293 (391)
T KOG0983|consen 233 LCDFGISGRLVDSK----AHTRS--------AGCAAYMAPERIDPPDKPKYDIRADVWSLG-------ITLVELATGQYP 293 (391)
T ss_pred eecccccceeeccc----ccccc--------cCCccccCccccCCCCCCccchhhhhhhhc-------cchhhhhcccCC
Confidence 99999998654311 11111 2446899999875 45688899999999 666777777654
Q ss_pred CCC--cCCcccceEe
Q 000316 396 GDY--TFHMVMPWVI 408 (1678)
Q Consensus 396 ~dl--~q~pv~pwv~ 408 (1678)
... +.+-++--|+
T Consensus 294 y~~c~tdFe~ltkvl 308 (391)
T KOG0983|consen 294 YKGCKTDFEVLTKVL 308 (391)
T ss_pred CCCCCccHHHHHHHH
Confidence 433 3344444444
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-23 Score=242.12 Aligned_cols=192 Identities=14% Similarity=0.112 Sum_probs=154.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcC---hHHHHHHHHhcCCCchhHHHhhccCCCCccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~---~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV 238 (1678)
.+|++.+.||+|+||.||+|++. .++..+|+|.+...... ......+. +|+++++.++||||+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~ei~~l~~l~h~~i~ 67 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDA------DTGRELAVKQVPFDPDSQETSKEVNALE--------CEIQLLKNLRHDRIV 67 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEc------CCCCEEEEEEEecCcccchhhHHHHHHH--------HHHHHHHHcCCCCcc
Confidence 46999999999999999999964 46789999987543211 12222333 899999999999999
Q ss_pred ceeeEEEeC--CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 239 PVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 239 ~l~~~~~~~--~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
++++++.+. ..+++||||+++ +|.+++. ....+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~--~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-- 143 (264)
T cd06653 68 QYYGCLRDPEEKKLSIFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG-- 143 (264)
T ss_pred eEEEEEEcCCCCEEEEEEEeCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--
Confidence 999998764 468999999985 9999987 345588999999999999999999999999999999999999988
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+++......... . ......++..|+|||.+.+..++.++|+|+.|++.
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~---~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 199 (264)
T cd06653 144 NVKLGDFGASKRIQTICMSG---T-----GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV 199 (264)
T ss_pred CEEECccccccccccccccC---c-----cccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence 89999999998643211000 0 01122468889999999988899999999999554
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=245.03 Aligned_cols=186 Identities=15% Similarity=0.141 Sum_probs=146.7
Q ss_pred eeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCC
Q 000316 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1678)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~ 248 (1678)
.||+|+||.||+|.... ...+..+|+|.+... ........+. +|+.+++.++||||+++++++. ..
T Consensus 2 ~ig~G~~g~v~~~~~~~----~~~~~~vavk~~~~~-~~~~~~~~~~--------~E~~~l~~l~h~~ii~~~~~~~-~~ 67 (257)
T cd05115 2 ELGSGNFGCVKKGVYKM----RKKQIDVAIKVLKNE-NEKSVRDEMM--------REAEIMHQLDNPYIVRMIGVCE-AE 67 (257)
T ss_pred ccCCCCcccEEEEEEec----CCCceeEEEEEcccc-cChHHHHHHH--------HHHHHHHhcCCCCeEEEEEEEc-CC
Confidence 48999999999997542 134567999998653 2222233344 8999999999999999999886 45
Q ss_pred eEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCccc
Q 000316 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 249 ~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~ 327 (1678)
..++||||+++ +|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 68 ~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl~dfg~~~~ 144 (257)
T cd05115 68 ALMLVMEMASGGPLNKFLSG-KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH--YAKISDFGLSKA 144 (257)
T ss_pred CeEEEEEeCCCCCHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC--cEEeccCCcccc
Confidence 78999999985 99999873 345689999999999999999999999999999999999999998 899999999985
Q ss_pred CCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
......... . .....++..|+|||.+....++.++|+|+.|.+.
T Consensus 145 ~~~~~~~~~---~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 188 (257)
T cd05115 145 LGADDSYYK---A-----RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITM 188 (257)
T ss_pred ccCCcccee---c-----cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHH
Confidence 432111100 0 0111235689999999888899999999999654
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-23 Score=244.83 Aligned_cols=189 Identities=13% Similarity=0.104 Sum_probs=157.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|+++++||+|+||.||+|.+. .+..+|+|.+..... ....++. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~-------~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~ 67 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWK-------NRVRVAIKILKSDDL--LKQQDFQ--------KEVQALKRLRHKHLISL 67 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEec-------CCCcEEEEeccccch--hhHHHHH--------HHHHHHhcCCCcchhhe
Confidence 457999999999999999999963 377899999865322 1222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+..++||||+++ +|.+++.......++...+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~--~~kl 145 (261)
T cd05148 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL--VCKV 145 (261)
T ss_pred eeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc--eEEE
Confidence 9999999999999999995 999999865556789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++........ .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 146 ~d~g~~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l 194 (261)
T cd05148 146 ADFGLARLIKEDVYL-----------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILL 194 (261)
T ss_pred ccccchhhcCCcccc-----------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHH
Confidence 999999854321100 1122356679999999888999999999999543
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-23 Score=241.26 Aligned_cols=192 Identities=21% Similarity=0.195 Sum_probs=154.0
Q ss_pred eEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEE
Q 000316 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1678)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~ 244 (1678)
++.+.||.|+||.||+|.... .....+..|+||.++.. .......+++ +|++.++.++||||+++++++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~--~~~~~~~~V~vk~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~~g~~ 70 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ--KDNDKNQPVAVKILKPS-SSEEEEEEFL--------NEIQILRKLRHPNIVKLYGFC 70 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES--TTTSSEEEEEEEEESTT-SSHHHHHHHH--------HHHHHHHTHSBTTBE-EEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc--ccCCCCEEEEEEEeccc-cccccceeee--------ecccccccccccccccccccc
Confidence 568899999999999999652 22356788999999542 3334455665 899999999999999999999
Q ss_pred EeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 245 KTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 245 ~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
...+..++||||++ |+|.++|.......++...+..++.||+.||.|||+++|+||||+|+|||++.++ .+||+|||
T Consensus 71 ~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~--~~Kl~~f~ 148 (259)
T PF07714_consen 71 IENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG--QVKLSDFG 148 (259)
T ss_dssp ESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT--EEEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 98888999999999 5999999965457789999999999999999999999999999999999999999 99999999
Q ss_pred CcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
+++........ ...........|+|||.+.+..++.++|+|++|.+
T Consensus 149 ~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~ 194 (259)
T PF07714_consen 149 LSRPISEKSKY---------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGML 194 (259)
T ss_dssp TGEETTTSSSE---------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHH
T ss_pred ccccccccccc---------ccccccccccccccccccccccccccccccccccc
Confidence 99865211111 11112235678999999999999999999999933
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-23 Score=243.26 Aligned_cols=188 Identities=15% Similarity=0.126 Sum_probs=153.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||.||++... .+..+|+|.+.... .....+. +|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-------~~~~~~iK~~~~~~---~~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-------KHTKVAVKTMKPGS---MSVEAFL--------AEANVMKTLQHDKLVKL 66 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-------CCccEEEEecCCCh---hHHHHHH--------HHHHHHHhcCCCCcceE
Confidence 568999999999999999999843 34569999876432 1223344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.. ...+++|||++ ++|.+++.......++...++.++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05073 67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL--VCKI 143 (260)
T ss_pred EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEE
Confidence 999987 77899999998 5999999854555678888999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||++....++..+|+|+.|.+.
T Consensus 144 ~d~~~~~~~~~~~~~~----------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05073 144 ADFGLARVIEDNEYTA----------REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 193 (260)
T ss_pred CCCcceeeccCCCccc----------ccCCcccccccCHhHhccCCcCccccchHHHHHH
Confidence 9999997543211100 0111245679999999988899999999999654
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-23 Score=246.54 Aligned_cols=208 Identities=12% Similarity=0.013 Sum_probs=147.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHH-hcCCCchhHHHhhccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLR-LIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~-~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
..+|++.+.||+|+||.||+|.+.- ....+..+|+|+...............+ ......+.+...+..+.|+||++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~---~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~ 87 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCAS---DHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPK 87 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcC---CcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCc
Confidence 3579999999999999999998541 1112456777764432221111111110 00011124555667789999999
Q ss_pred eeeEEEeCC----eEEEeccCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCce
Q 000316 240 VLGLLKTSG----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 240 l~~~~~~~~----~~~lVmEy~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~ 315 (1678)
++++..... ..+++||++..++.+++.. ....++..++.++.|++.||+|||+++|+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~-- 163 (294)
T PHA02882 88 YYGCGSFKRCRMYYRFILLEKLVENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN-- 163 (294)
T ss_pred EEEeeeEecCCceEEEEEEehhccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--
Confidence 999876544 4578899988888888763 33467888999999999999999999999999999999999988
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+|+............. .......||+.|+|||+..+..|+.++|+|+.|++.
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~----~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l 223 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSK----EQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCM 223 (294)
T ss_pred cEEEEEcCCceeeccCCccccccc----ccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHH
Confidence 899999999986432111100000 011123489999999999999999999999999543
|
|
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.3e-23 Score=242.92 Aligned_cols=194 Identities=18% Similarity=0.170 Sum_probs=155.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|++++.||+|+||.||+|..+... ......+|+|.+..... .....++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~--~~~~~~~aik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEG--EKVKIPVAIKVLREETS-PKANKEIL--------DEAYVMASVDHPHVVRL 74 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCC--CCcceEEEEEeccCCCC-HHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 467999999999999999999864211 11245799998865432 22333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+ ...++||||++ |+|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~-~~~~~v~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~--~~kL 150 (279)
T cd05057 75 LGICLS-SQVQLITQLMPLGCLLDYVRN-HKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ--HVKI 150 (279)
T ss_pred EEEEec-CceEEEEecCCCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC--eEEE
Confidence 999987 78999999998 599999984 344589999999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
+|||+++......... . .....++..|+|||.+....++.++|+|+.|.+
T Consensus 151 ~dfg~~~~~~~~~~~~----~-----~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 200 (279)
T cd05057 151 TDFGLAKLLDVDEKEY----H-----AEGGKVPIKWMALESILHRIYTHKSDVWSYGVT 200 (279)
T ss_pred CCCcccccccCcccce----e-----cCCCcccccccCHHHhhcCCcCchhhHHHHHHH
Confidence 9999998654211110 0 011224567999999988899999999999965
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-22 Score=234.10 Aligned_cols=271 Identities=18% Similarity=0.254 Sum_probs=216.5
Q ss_pred cccEEEEEEecCC--CEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEECCC
Q 000316 1327 HGALRSVAVGQDE--CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQT 1402 (1678)
Q Consensus 1327 ~~~V~svafspdg--~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~~t 1402 (1678)
.++|.+++|+|.. ...+|+| ..|.|++..+.....++....+.|++++|-.||..+|.+ .|.|+|+|..+
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S------~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~ 99 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSS------VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS 99 (487)
T ss_pred cCcceeEecCCCCCCceEEecc------cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc
Confidence 4689999999954 3455555 689999999988888888899999999999898888766 58999999766
Q ss_pred CceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEEC
Q 000316 1403 GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1482 (1678)
Q Consensus 1403 g~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl 1482 (1678)
...++.+.. |+.++..+.|++. ++..+++|+.|+.+++||+
T Consensus 100 r~iLR~~~a------------------------------h~apv~~~~f~~~---------d~t~l~s~sDd~v~k~~d~ 140 (487)
T KOG0310|consen 100 RVILRQLYA------------------------------HQAPVHVTKFSPQ---------DNTMLVSGSDDKVVKYWDL 140 (487)
T ss_pred HHHHHHHhh------------------------------ccCceeEEEeccc---------CCeEEEecCCCceEEEEEc
Confidence 445555544 3455666666654 5677889999999999999
Q ss_pred CCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCC-cEEEEEeccCCCeEEEE
Q 000316 1483 NQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKLA 1561 (1678)
Q Consensus 1483 ~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg-~~i~~l~gH~~~V~sva 1561 (1678)
.+......+.+ |...|+|.++++ .++.+++||+.||.|++||+|+. ..+..+. |..+|-+|.
T Consensus 141 s~a~v~~~l~~------htDYVR~g~~~~----------~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-hg~pVe~vl 203 (487)
T KOG0310|consen 141 STAYVQAELSG------HTDYVRCGDISP----------ANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-HGCPVESVL 203 (487)
T ss_pred CCcEEEEEecC------CcceeEeecccc----------CCCeEEEecCCCceEEEEEeccCCceeEEec-CCCceeeEE
Confidence 99886556664 456789988875 34479999999999999999987 6677776 899999999
Q ss_pred -cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEecCCCCCCCCcceecc
Q 000316 1562 -APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVP 1637 (1678)
Q Consensus 1562 -spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~ 1637 (1678)
-|.|..+||++ ...|+|||+.+|. +.+..+..|...|+| +..++..|+|||-|+ +++||+.+
T Consensus 204 ~lpsgs~iasAg-Gn~vkVWDl~~G~-qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~------------ 269 (487)
T KOG0310|consen 204 ALPSGSLIASAG-GNSVKVWDLTTGG-QLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTN------------ 269 (487)
T ss_pred EcCCCCEEEEcC-CCeEEEEEecCCc-eehhhhhcccceEEEEEeecCCceEeecccccceEEEEccc------------
Confidence 88999999998 5699999999774 444556669999997 677889999999999 99999641
Q ss_pred ceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEE
Q 000316 1638 QKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRL 1676 (1678)
Q Consensus 1638 ~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrI 1676 (1678)
|....+.+..++|.+++++|+++.++.|..||.+-+
T Consensus 270 ---~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 270 ---YKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSI 305 (487)
T ss_pred ---eEEEEeeecccceeeEEecCCCceEEEecccceeee
Confidence 111112246789999999999999999999998754
|
|
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-23 Score=248.20 Aligned_cols=199 Identities=16% Similarity=0.168 Sum_probs=156.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC-CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV 238 (1678)
.++|++.++||+|+||.||+|++.... ........+|+|.++... ......++. +|+++++.+ +||||+
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv 81 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLI--------SEMELMKLIGKHKNII 81 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhccCCCCee
Confidence 468999999999999999999853211 111345679999987532 233333444 899999999 699999
Q ss_pred ceeeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1678)
Q Consensus 239 ~l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLK 303 (1678)
++++++...+.+|+||||++ |+|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 161 (314)
T cd05099 82 NLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLA 161 (314)
T ss_pred eEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999999999999998 59999997422 2357888899999999999999999999999999
Q ss_pred CCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 304 P~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||++.++ .+||+|||+++......... .. ....++..|||||.+.+..++.++|+|+.|.+.
T Consensus 162 p~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---~~------~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l 226 (314)
T cd05099 162 ARNVLVTEDN--VMKIADFGLARGVHDIDYYK---KT------SNGRLPVKWMAPEALFDRVYTHQSDVWSFGILM 226 (314)
T ss_pred ceeEEEcCCC--cEEEcccccccccccccccc---cc------ccCCCCccccCHHHHccCCcCccchhhHHHHHH
Confidence 9999999998 89999999998543211100 00 001134579999999988999999999999664
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=244.11 Aligned_cols=188 Identities=16% Similarity=0.153 Sum_probs=152.1
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+...... ...+. +|+++++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-------~~~~~~lK~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWN-------GTTKVAIKTLKPGTMM---PEAFL--------QEAQIMKKLRHDKLVPL 66 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEc-------CCceEEEEEcccCCcc---HHHHH--------HHHHHHHhCCCCCeeeE
Confidence 357999999999999999999853 3345899987654322 22333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++. .+..++||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~--~~~l 143 (260)
T cd05069 67 YAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL--VCKI 143 (260)
T ss_pred EEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--eEEE
Confidence 99885 4568999999985 999999854455678899999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||...+..++..+|+|+.|.+.
T Consensus 144 ~dfg~~~~~~~~~~~~----------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l 193 (260)
T cd05069 144 ADFGLARLIEDNEYTA----------RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILL 193 (260)
T ss_pred CCCccceEccCCcccc----------cCCCccchhhCCHHHhccCCcChHHHHHHHHHHH
Confidence 9999998543211100 0112245679999999888899999999999654
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=250.93 Aligned_cols=198 Identities=17% Similarity=0.153 Sum_probs=155.0
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCC-CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~-~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
.+|++++.||+|+||.||+|++.-.. ........+|+|.++.. .......++. +|+++++++ +||||++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLV--------SEMEMMKMIGKHKNIIN 82 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 47999999999999999999853211 11123457999988643 2233334444 899999999 7999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCC
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP 304 (1678)
+++++..++.+++||||+++ +|.+++.... ...++...+..++.|++.||.|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 99999999999999999984 9999997421 23467778889999999999999999999999999
Q ss_pred CCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 305 ~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++.++ .+||+|||+++......... . .....++..|||||++.+..++.++|+|+.|.+.
T Consensus 163 ~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 226 (334)
T cd05100 163 RNVLVTEDN--VMKIADFGLARDVHNIDYYK---K------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL 226 (334)
T ss_pred ceEEEcCCC--cEEECCcccceecccccccc---c------ccCCCcCceEcCHHHhccCCcCchhhhHHHHHHH
Confidence 999999998 89999999998543211100 0 0111234679999999999999999999999654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-23 Score=242.30 Aligned_cols=188 Identities=19% Similarity=0.095 Sum_probs=145.6
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|... ....+..+|+|.++... .......+. +|+.+++.++||||+++++++.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~----~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~ 67 (269)
T cd05087 1 KEIGNGWFGKVILGEVN----SGYTPAQVVVKELRVSA-SVQEQMKFL--------EEAQPYRSLQHSNLLQCLGQCTEV 67 (269)
T ss_pred CcccccCCceEEEEEEc----CCCCceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhCCCCCEeeEEEEEcCC
Confidence 46999999999999853 12346779999986542 222333444 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecC
Q 000316 248 GLITSVIPKTP-YTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~---~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFG 323 (1678)
...++||||++ |+|.+++.... ....+...++.++.|++.||+|||++||+||||||+||+++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~--~~kL~dfg 145 (269)
T cd05087 68 TPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL--TVKIGDYG 145 (269)
T ss_pred CCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEECCcc
Confidence 99999999999 59999997422 22456677888999999999999999999999999999999988 89999999
Q ss_pred CcccCCCCCcccccCCCCcceeecccccCcccccccccccc-------cccccccccccCccc
Q 000316 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-------DWHSQFNRWWRGELS 379 (1678)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~-------~y~~~~d~W~~G~is 379 (1678)
+++......... ......++..|+|||++.+. .++.++|+|+.|.+.
T Consensus 146 ~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l 199 (269)
T cd05087 146 LSHNKYKEDYYV---------TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTI 199 (269)
T ss_pred ccccccCcceee---------cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHH
Confidence 997432111000 01112356789999988643 357799999999553
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=241.26 Aligned_cols=183 Identities=16% Similarity=0.145 Sum_probs=148.0
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|.. .++..+|+|.+.... .......+. +|+.+++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~-------~~~~~~a~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-------KDKTPVAVKTCKEDL-PQELKIKFL--------SEARILKQYDHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEe-------cCCcEEEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCCcCeEEEEEecC
Confidence 4699999999999984 356789999986532 222223344 899999999999999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
+..++||||+++ +|.+++.. ....+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l~d~g~~~ 141 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRK-KKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (250)
T ss_pred CccEEEEECCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC--eEEECCCccce
Confidence 999999999984 99999874 234578999999999999999999999999999999999999998 89999999987
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
........ . .....++..|+|||++.+..++.+.|+|+.|.+.
T Consensus 142 ~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll 184 (250)
T cd05085 142 QEDDGIYS----S------SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL 184 (250)
T ss_pred eccccccc----c------CCCCCCcccccCHHHhccCCCCchhHHHHHHHHH
Confidence 53311100 0 0011235679999999988899999999999553
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5e-21 Score=213.53 Aligned_cols=276 Identities=12% Similarity=0.117 Sum_probs=214.8
Q ss_pred CCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEe
Q 000316 1283 EPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWE 1359 (1678)
Q Consensus 1283 ~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWD 1359 (1678)
.+.|.+ |+.+|.. +++++.|.+++|||.. |.+++++..+...|..++|......++.++. ..|.+||.-+
T Consensus 14 ~~~i~sl~fs~~G~~-----litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt--k~d~tIryLs 86 (311)
T KOG1446|consen 14 NGKINSLDFSDDGLL-----LITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST--KEDDTIRYLS 86 (311)
T ss_pred CCceeEEEecCCCCE-----EEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC--CCCCceEEEE
Confidence 355664 8999987 9999999999999987 8999999999999999999988887887775 5789999999
Q ss_pred CCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccccccccccc
Q 000316 1360 LTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1437 (1678)
Q Consensus 1360 l~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~ 1437 (1678)
+.+.++++.|.||.+.|++++.+|-+..+ +|.|++||+||++..+|...+.....
T Consensus 87 l~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~----------------------- 143 (311)
T KOG1446|consen 87 LHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR----------------------- 143 (311)
T ss_pred eecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC-----------------------
Confidence 99999999999999999999999987776 56699999999998888766653211
Q ss_pred ccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCC--eeeEEeeCCCCcccCCCcceEEEeeCCCcc
Q 000316 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1678)
Q Consensus 1438 ~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg--~~l~~l~~~~~~v~~~~~V~sva~~~~~~~ 1515 (1678)
...|+.|+|-.+|++...+.|++||+|.- .+-.++..... -....+.+.|+
T Consensus 144 -------------------pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~---~~~ew~~l~FS----- 196 (311)
T KOG1446|consen 144 -------------------PIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDN---DEAEWTDLEFS----- 196 (311)
T ss_pred -------------------cceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCC---CccceeeeEEc-----
Confidence 12345566989999988889999999863 33344432211 12234445443
Q ss_pred ccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCe--E-EEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCe
Q 000316 1516 QAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV--T-KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1591 (1678)
Q Consensus 1516 s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V--~-sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1591 (1678)
++|+.++.+...+.+++.|.-+|..+.++.++...- . +.. .||++++++|+.||+|.+|+++++ ..+.
T Consensus 197 ------~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg--~~v~ 268 (311)
T KOG1446|consen 197 ------PDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNLETG--KKVA 268 (311)
T ss_pred ------CCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEcCCC--cEee
Confidence 566799999999999999999999999998776432 2 223 899999999999999999999998 6667
Q ss_pred Eeec-CCCCEEEEEecCCEEEEEeCCC-eEEEec
Q 000316 1592 VFKG-HTNGISGFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1592 ~l~g-H~~~V~afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
.+++ +..++.++..+-++...++.+. +.+|-.
T Consensus 269 ~~~~~~~~~~~~~~fnP~~~mf~sa~s~l~fw~p 302 (311)
T KOG1446|consen 269 VLRGPNGGPVSCVRFNPRYAMFVSASSNLVFWLP 302 (311)
T ss_pred EecCCCCCCccccccCCceeeeeecCceEEEEec
Confidence 7777 6777776444444444444445 777753
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=2e-23 Score=248.11 Aligned_cols=199 Identities=16% Similarity=0.152 Sum_probs=155.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCC--------CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS--------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL 232 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~--------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l 232 (1678)
.++|++.++||+|+||.||+|++.-.. ........||+|.+... ........+. +|+++|+.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~--------~ei~~l~~l 74 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFL--------KEIKIMSRL 74 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHH--------HHHHHHHhC
Confidence 357999999999999999999853100 00112346899998753 2222333344 899999999
Q ss_pred CCCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecC
Q 000316 233 RHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 301 (1678)
Q Consensus 233 ~HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~----------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRD 301 (1678)
+||||+++++++...+..++||||+++ +|.+++.... ...++...+..++.|++.||.|||++|++|||
T Consensus 75 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 154 (295)
T cd05097 75 KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD 154 (295)
T ss_pred CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999999999999999999999999995 9999986321 12367788899999999999999999999999
Q ss_pred CCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 302 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 302 LKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+|||++.++ .+||+|||+++........ .......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 155 lkp~Nill~~~~--~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l 221 (295)
T cd05097 155 LATRNCLVGNHY--TIKIADFGMSRNLYSGDYY---------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL 221 (295)
T ss_pred cChhhEEEcCCC--cEEecccccccccccCcce---------eccCcCcCceeecChhhhccCCcCchhhHHHHHHHH
Confidence 999999999988 8999999999854321100 011122346789999999888899999999999664
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-23 Score=243.51 Aligned_cols=197 Identities=15% Similarity=0.101 Sum_probs=156.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
..+|...++||+|+||.||++..... ....++..+|+|.+... .......+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNL-LPEQDKMLVAVKALKEA--SESARQDFQ--------REAELLTVLQHQHIVRF 72 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecC-CCCCCceEEEEEecCcC--CHHHHHHHH--------HHHHHHhcCCCCCCceE
Confidence 35788999999999999999974321 12245678999987642 233333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCC
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPN-------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~-------------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~N 306 (1678)
++++.+.+..++||||++ ++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+|
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~n 152 (280)
T cd05092 73 YGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRN 152 (280)
T ss_pred EEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhh
Confidence 999999999999999998 599999974321 347889999999999999999999999999999999
Q ss_pred eEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 307 VLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 307 ILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
||+++++ .+||+|||+++......... ......+++.|+|||.+.+..++.++|+|+.|+|.
T Consensus 153 il~~~~~--~~kL~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (280)
T cd05092 153 CLVGQGL--VVKIGDFGMSRDIYSTDYYR---------VGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL 214 (280)
T ss_pred EEEcCCC--CEEECCCCceeEcCCCceee---------cCCCccccccccCHHHhccCCcCchhhHHHHHHHH
Confidence 9999988 89999999997543211000 01112246789999999999999999999999554
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-23 Score=240.93 Aligned_cols=195 Identities=15% Similarity=0.151 Sum_probs=156.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|+..+.||+|+||.||+|+... .......+|+|.+.... ......++. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 72 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKM---PGRKEVAVAIKTLKPGY-TEKQRQDFL--------SEASIMGQFSHHNIIRLE 72 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEec---CCCCceEEEEEeccccC-CHHHHHHHH--------HHHHHHhcCCCCCeeEEE
Confidence 468899999999999999999642 11234589999986532 222333444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++.+.+..|+||||+++ +|.+++.. ....++...+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~--~~kl~ 149 (268)
T cd05063 73 GVVTKFKPAMIITEYMENGALDKYLRD-HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL--ECKVS 149 (268)
T ss_pred EEEccCCCcEEEEEcCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC--cEEEC
Confidence 999999999999999995 99999873 345689999999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++.......... .......+..|+|||++....++.+.|+|+.|.+.
T Consensus 150 dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il 200 (268)
T cd05063 150 DFGLSRVLEDDPEGTY--------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM 200 (268)
T ss_pred CCccceecccccccce--------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHH
Confidence 9999985442111000 00111234579999999888899999999999553
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-23 Score=244.56 Aligned_cols=281 Identities=21% Similarity=0.292 Sum_probs=210.6
Q ss_pred ccccEE---EEEEe-cCCCEEEEEecCCCCCCeEEEEeCCC--C----eEEEEEecCCccEEEEeecCCCCcE--EeCCC
Q 000316 1326 HHGALR---SVAVG-QDECTVFTAGIGPGFKGTVQKWELTR--I----NCVSGYYGHEEVVNDICVLSSSGRI--ASCDG 1393 (1678)
Q Consensus 1326 H~~~V~---svafs-pdg~~LaSgS~d~~~DgtVrlWDl~t--g----~~l~~l~gH~~~V~sV~fs~~~~~l--aS~Dg 1393 (1678)
|...|. .+..+ |++++|+|||. ||.|++|+... + .++..++.|.++|+++....++..+ +|+|-
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGR----Dg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDt 95 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGR----DGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDT 95 (735)
T ss_pred ccccccchhhccccCCCCceEEecCC----CceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCc
Confidence 444555 44444 45678999998 99999999753 2 2577889999999999987777666 67799
Q ss_pred cEEEEECCCC--ceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEe-ecCCCEEEE
Q 000316 1394 TLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHH-IECVERLVV 1470 (1678)
Q Consensus 1394 tVrIWD~~tg--~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~-sp~g~~Las 1470 (1678)
||++|+...+ -|..++..| .++|.|+++ .++...+|+
T Consensus 96 TVK~W~~~~~~~~c~stir~H----------------------------------------~DYVkcla~~ak~~~lvaS 135 (735)
T KOG0308|consen 96 TVKVWNAHKDNTFCMSTIRTH----------------------------------------KDYVKCLAYIAKNNELVAS 135 (735)
T ss_pred eEEEeecccCcchhHhhhhcc----------------------------------------cchheeeeecccCceeEEe
Confidence 9999998866 344444433 345777777 667889999
Q ss_pred EECCCcEEEEECCCC--eeeEEeeCCCC---cccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc
Q 000316 1471 GIGNGSLRFIDINQG--QKLHLWRGEPT---ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN 1545 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg--~~l~~l~~~~~---~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~ 1545 (1678)
|+-|+.|.+||+.+| +.+.++...+. ..+....|.+++.. +.|..+++|+..+.+++||.++++
T Consensus 136 gGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N-----------~t~t~ivsGgtek~lr~wDprt~~ 204 (735)
T KOG0308|consen 136 GGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMN-----------QTGTIIVSGGTEKDLRLWDPRTCK 204 (735)
T ss_pred cCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecC-----------CcceEEEecCcccceEEecccccc
Confidence 999999999999988 44544432221 11445566666653 455689999999999999999999
Q ss_pred EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEE
Q 000316 1546 VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLS 1621 (1678)
Q Consensus 1546 ~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vw 1621 (1678)
.+..++||..-|..+. ..||+.++|+|.||+|++||+... +++.++..|+++|++ .+++-..+.+|+.|+ |..-
T Consensus 205 kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ--rCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~T 282 (735)
T KOG0308|consen 205 KIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ--RCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRT 282 (735)
T ss_pred ceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc--ceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEec
Confidence 9999999999999999 999999999999999999999877 788899999999997 566678899999999 9999
Q ss_pred ecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1622 SLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1622 dl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
|+.... ..+-+.. ...+|..+..+.+..-+=+++.|+.|+-|
T Consensus 283 dl~n~~--------~~tlick------~daPv~~l~~~~~~~~~WvtTtds~I~rW 324 (735)
T KOG0308|consen 283 DLRNPA--------KSTLICK------EDAPVLKLHLHEHDNSVWVTTTDSSIKRW 324 (735)
T ss_pred ccCCch--------hheEeec------CCCchhhhhhccccCCceeeeccccceec
Confidence 986321 1111211 22344444444333333456667777666
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-22 Score=226.28 Aligned_cols=277 Identities=16% Similarity=0.246 Sum_probs=216.6
Q ss_pred ccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCce
Q 000316 1328 GALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKL 1405 (1678)
Q Consensus 1328 ~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~ 1405 (1678)
-.+.++...+....++|||. |+++.++|..+++.+.+|+||...|+++.|+++...+ +|.|..|+||......+
T Consensus 220 pgi~ald~~~s~~~ilTGG~----d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~ 295 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGE----DKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSE 295 (506)
T ss_pred CCeeEEeecCCCCcceecCC----CCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccC
Confidence 45777888887778999998 8999999999999999999999999999999987776 77799999999876554
Q ss_pred eEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCC
Q 000316 1406 LSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485 (1678)
Q Consensus 1406 ~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg 1485 (1678)
......| ...|+.+..+|+|.++++++.|++.-+.|+++|
T Consensus 296 ~~~~~~h----------------------------------------~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g 335 (506)
T KOG0289|consen 296 PTSSRPH----------------------------------------EEPVTGLSLHPTGEYLLSASNDGTWAFSDISSG 335 (506)
T ss_pred ccccccc----------------------------------------cccceeeeeccCCcEEEEecCCceEEEEEccCC
Confidence 3333322 123566667778999999999999999999999
Q ss_pred eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCC
Q 000316 1486 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APE 1564 (1678)
Q Consensus 1486 ~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spd 1564 (1678)
..+.........+ .+++.+|. |||.++++|+.||.|++||+.++..+..|.+|+++|..|+ +.|
T Consensus 336 ~~lt~vs~~~s~v----~~ts~~fH-----------pDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsEN 400 (506)
T KOG0289|consen 336 SQLTVVSDETSDV----EYTSAAFH-----------PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSEN 400 (506)
T ss_pred cEEEEEeeccccc----eeEEeeEc-----------CCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccC
Confidence 9887665432222 24555553 5568999999999999999999999999999999999999 889
Q ss_pred CCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceee
Q 000316 1565 DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLY 1641 (1678)
Q Consensus 1565 g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~ 1641 (1678)
|-+||+++.|+.|++||+|...--+.+.+.... .|. +|...|++|+.++.|- |++++- ..+-|
T Consensus 401 GY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~-~v~s~~fD~SGt~L~~~g~~l~Vy~~~k-------------~~k~W 466 (506)
T KOG0289|consen 401 GYWLATAADDGSVKLWDLRKLKNFKTIQLDEKK-EVNSLSFDQSGTYLGIAGSDLQVYICKK-------------KTKSW 466 (506)
T ss_pred ceEEEEEecCCeEEEEEehhhcccceeeccccc-cceeEEEcCCCCeEEeecceeEEEEEec-------------ccccc
Confidence 999999999999999999986322222332222 455 4777799999985544 555441 12233
Q ss_pred eeecC-CCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1642 MVDNG-AKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1642 ~~~~g-~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
..... ..|.+..+.+.|..+.+++++||.|..++++
T Consensus 467 ~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~ 503 (506)
T KOG0289|consen 467 TEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLY 503 (506)
T ss_pred eeeehhhhcccccceeeecccceEEeeccchhheEEe
Confidence 33221 2466788999999999999999999999886
|
|
| >KOG0294 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-22 Score=219.87 Aligned_cols=239 Identities=16% Similarity=0.227 Sum_probs=199.0
Q ss_pred cccCCCCceEeecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCC--EEEEEecCCCCCCe
Q 000316 1278 NLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1278 ~l~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~--~LaSgS~d~~~Dgt 1354 (1678)
....|++.+.++..+|.| +||||.|.+|+|||+. ...+..+-.|.+.|+++.|.++-. .|+||+. ||.
T Consensus 38 ~~~aH~~sitavAVs~~~-----~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sd----DG~ 108 (362)
T KOG0294|consen 38 AFSAHAGSITALAVSGPY-----VASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSD----DGH 108 (362)
T ss_pred cccccccceeEEEeccee-----EeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecC----CCc
Confidence 456799999999989998 9999999999999998 567888889999999999999875 8999997 999
Q ss_pred EEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccc
Q 000316 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1678)
Q Consensus 1355 VrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~ 1432 (1678)
|.+|+..+.+++.++++|.+.|+.|+.+|.+..- +++|++++.||+-+|+.-..++-.
T Consensus 109 i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~-------------------- 168 (362)
T KOG0294|consen 109 IIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK-------------------- 168 (362)
T ss_pred EEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC--------------------
Confidence 9999999999999999999999999999988765 677999999999988765444321
Q ss_pred cccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCC
Q 000316 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1433 ~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~ 1512 (1678)
+..+.+.|+|.|.+++.++.+ .|-+|-+.+......+. .+..+.|+.|
T Consensus 169 ---------------------~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~-------~~~r~l~~~~--- 216 (362)
T KOG0294|consen 169 ---------------------NKATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIE-------NPKRILCATF--- 216 (362)
T ss_pred ---------------------CcceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhh-------ccccceeeee---
Confidence 112346677789999888764 58889887665543333 2223444443
Q ss_pred CccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE---cCCCCEEEEEeCCCcEEEEEcCCCC
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA---APEDHLLVSSSLDKTLRIWDLRRNW 1586 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva---spdg~~LaSgS~DgtI~IWDl~~~~ 1586 (1678)
.+++.+++|.+|+.|++||..++.+...+.+|...|-++. .|++.+|+|+|.||.|+|||++...
T Consensus 217 ---------l~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~ 284 (362)
T KOG0294|consen 217 ---------LDGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDMET 284 (362)
T ss_pred ---------cCCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccccc
Confidence 3567999999999999999999999999999999999988 5777899999999999999998763
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.7e-23 Score=219.82 Aligned_cols=223 Identities=19% Similarity=0.280 Sum_probs=182.3
Q ss_pred EEEEeCCCCEEEEeCC--CceeEEeccccccEEEEEEecCC-CEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEE
Q 000316 1301 LGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~--~~~l~tl~gH~~~V~svafspdg-~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~ 1377 (1678)
++++++||+++|||.. ...++.++.|...|.++.|++-. +.++++| +|+||++||...++.++++.||..-|+
T Consensus 76 ~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsS----WD~TiKLW~~~r~~Sv~Tf~gh~~~Iy 151 (311)
T KOG0277|consen 76 VIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSS----WDGTIKLWDPNRPNSVQTFNGHNSCIY 151 (311)
T ss_pred EEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeec----cCCceEeecCCCCcceEeecCCccEEE
Confidence 8999999999999976 66899999999999999999864 5566665 699999999999999999999999999
Q ss_pred EEeecCCCCcE---EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCC
Q 000316 1378 DICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1454 (1678)
Q Consensus 1378 sV~fs~~~~~l---aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~ 1454 (1678)
..+|+|....+ +|+|+++++||++.......+..| ..+++++.|+..
T Consensus 152 ~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah------------------------------~~Eil~cdw~ky 201 (311)
T KOG0277|consen 152 QAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAH------------------------------NSEILCCDWSKY 201 (311)
T ss_pred EEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEec------------------------------cceeEeeccccc
Confidence 99999976665 566999999999753222224332 345666666653
Q ss_pred ceeEeEeecCCCEEEEEECCCcEEEEECCCC-eeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecC
Q 000316 1455 LYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSS 1533 (1678)
Q Consensus 1455 ~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~D 1533 (1678)
+.+.+++|+.|+.||.||++.- .++..+.+ |.-.|+.|.++|... +.||+++.|
T Consensus 202 ---------~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~g------h~~AVRkvk~Sph~~----------~lLaSasYD 256 (311)
T KOG0277|consen 202 ---------NHNVLATGGVDNLVRGWDIRNLRTPLFELNG------HGLAVRKVKFSPHHA----------SLLASASYD 256 (311)
T ss_pred ---------CCcEEEecCCCceEEEEehhhccccceeecC------CceEEEEEecCcchh----------hHhhhcccc
Confidence 4678999999999999999975 45666654 445689999987554 689999999
Q ss_pred CeEEEEeCCCC-cEEEEEeccCCCeEEEE-cC-CCCEEEEEeCCCcEEEEEc
Q 000316 1534 GQCRLFDVRSG-NVIASWRAHDGYVTKLA-AP-EDHLLVSSSLDKTLRIWDL 1582 (1678)
Q Consensus 1534 g~I~lWD~~tg-~~i~~l~gH~~~V~sva-sp-dg~~LaSgS~DgtI~IWDl 1582 (1678)
-++||||...+ ..+.+..-|++-|..+. ++ ++..+|+++.|+.++||+.
T Consensus 257 mT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 257 MTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred ceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 99999999854 46677778999999998 33 6679999999999999984
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-23 Score=239.22 Aligned_cols=184 Identities=18% Similarity=0.160 Sum_probs=155.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.. .+..+|+|.+..... ...++. +|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 65 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--------RGQKVAVKCLKDDST---AAQAFL--------AEASVMTTLRHPNLVQL 65 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--------cCcEEEEEEeccchh---HHHHHH--------HHHHHHHhcCCcceeee
Confidence 46799999999999999999984 367899999875422 233444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+.+..++||||++ ++|.++++......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~--~~~l 143 (256)
T cd05039 66 LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL--VAKV 143 (256)
T ss_pred EEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC--CEEE
Confidence 999999999999999999 5999999854444789999999999999999999999999999999999999999 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||.++....... ....+..|+|||.+....++.++|+|+.|.+.
T Consensus 144 ~d~g~~~~~~~~~~--------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il 189 (256)
T cd05039 144 SDFGLAKEASQGQD--------------SGKLPVKWTAPEALREKKFSTKSDVWSFGILL 189 (256)
T ss_pred cccccccccccccc--------------cCCCcccccCchhhcCCcCCcHHHHHHHHHHH
Confidence 99999986431100 01134579999999888899999999999664
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-23 Score=241.54 Aligned_cols=186 Identities=16% Similarity=0.157 Sum_probs=144.1
Q ss_pred eeeeeeCcEEEEEEEecCCC------CccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 168 AFIGICSYSIFEELASNFLS------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~------~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+.||+|+||.||+|+..... ........+++|.+.... ......+. +|+.+++.++||||++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~l~~l~hp~iv~~~ 70 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFF--------ETASMMRQVSHKHIVLLY 70 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46899999999999843100 011234468888875421 22222333 889999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-----e
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----S 315 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-----~ 315 (1678)
+++..+...++||||+++ +|..++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.++. .
T Consensus 71 ~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 71 GVCVRDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred EEEecCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCc
Confidence 999999999999999995 88877763 3456899999999999999999999999999999999999987651 1
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc-cccccccccccccCccc
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-~~~y~~~~d~W~~G~is 379 (1678)
.+|++|||++..... ...+.++..|+|||.+. +..++.++|+|+.|.+.
T Consensus 150 ~~~l~d~g~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 199 (262)
T cd05077 150 FIKLSDPGIPITVLS---------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTL 199 (262)
T ss_pred eeEeCCCCCCccccC---------------cccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence 389999999874321 11234677899999876 56789999999999654
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-23 Score=241.95 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=156.8
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
++|++++.||+|+||.||+|+.+... .......+++|.+.... .......+. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~-~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 74 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIE-EEGGETLVLVKALQKTK-DENLQSEFR--------RELDMFRKLSHKNVVRLL 74 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCC-cCCCcceEEEEccCCcc-chHHHHHHH--------HHHHHHHhcCCcceeeeE
Confidence 57999999999999999999965321 22356789999886532 221233444 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCC-CCHHHHHhhCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC
Q 000316 242 GLLKTSGLITSVIPKTP-YTLENILQFSPN-------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~-------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g 313 (1678)
+++.+.+..++||||++ |+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 75 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~ 154 (275)
T cd05046 75 GLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQR 154 (275)
T ss_pred EEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCC
Confidence 99999899999999999 599999984331 1589999999999999999999999999999999999999998
Q ss_pred ceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 314 ~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
.+||+|||+++........ . .....++..|+|||.+.+..++.+.|+|+.|.+.
T Consensus 155 --~~~l~~~~~~~~~~~~~~~----~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 208 (275)
T cd05046 155 --EVKVSLLSLSKDVYNSEYY----K------LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM 208 (275)
T ss_pred --cEEEcccccccccCccccc----c------cCCceeEEeecChhhhccCCCCchhhHHHHHHHH
Confidence 8999999998753311100 0 0111246679999999888889999999999553
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-23 Score=237.81 Aligned_cols=189 Identities=20% Similarity=0.144 Sum_probs=153.8
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|.+... ...+..+|+|.+....... ....+. +|+++++.++|+||+++++++.+.
T Consensus 1 ~~ig~g~~g~v~~~~~~~~---~~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~~~~~~i~~~~~~~~~~ 68 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGK---DGKTTEVAVKTLKEDASEE-ERKDFL--------KEARVMKKLGHPNVVRLLGVCTEE 68 (262)
T ss_pred CccccCCceEEEEEEEecC---CCCCceEEeEeeccccchh-HHHHHH--------HHHHHHhhcCCCChheeeeeecCC
Confidence 4799999999999996421 1237889999987643322 233333 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 248 GLITSVIPKTP-YTLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~-------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
..+++||||++ ++|.+++.... ...+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~--~~~l 146 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL--VVKI 146 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC--cEEE
Confidence 99999999997 59999998431 36789999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||.++......... ......++..|+|||.+....++.++|+|+.|.+.
T Consensus 147 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 197 (262)
T cd00192 147 SDFGLSRDVYDDDYYR---------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLL 197 (262)
T ss_pred cccccccccccccccc---------cccCCCcCccccCHHHhccCCcchhhccHHHHHHH
Confidence 9999998654221100 01122357789999999888999999999999654
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=246.78 Aligned_cols=196 Identities=14% Similarity=0.143 Sum_probs=159.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
+.|+..+.||+|+||.||+|.+. .++..||+|.+..... ......+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDN------RTKEVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYITRYY 68 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEc------CCCeEEEEEEeccccc-hHHHHHHH--------HHHHHHHcCCCCccHhhh
Confidence 45788899999999999999864 4678899999865322 22223333 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++..++..|+||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+|+||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~--~~~l~ 143 (277)
T cd06642 69 GSYLKGTKLWIIMEYLGGGSALDLLK---PGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred cccccCCceEEEEEccCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC--CEEEc
Confidence 999999999999999995 9998886 34678999999999999999999999999999999999999998 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCCC
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs~ 395 (1678)
|||+++....... ......++..|+|||.+.+..++.++|+|+.|.+. +..+.|+..
T Consensus 144 dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il-------~el~tg~~p 200 (277)
T cd06642 144 DFGVAGQLTDTQI-----------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITA-------IELAKGEPP 200 (277)
T ss_pred cccccccccCcch-----------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHH-------HHHHhCCCC
Confidence 9999975432110 01112367889999999998999999999999554 334456653
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-22 Score=238.58 Aligned_cols=271 Identities=18% Similarity=0.279 Sum_probs=213.4
Q ss_pred ccccCCCCceEe-ecCCCCCCCCCeEEEEeCCCCEEEEeCCCc---eeEEeccccccEEE-EEEec-CCCEEEEEecCCC
Q 000316 1277 SNLMKCEPWFWF-PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRS-VAVGQ-DECTVFTAGIGPG 1350 (1678)
Q Consensus 1277 ~~l~gH~~~V~~-fSpdg~~~~~~~LasgS~D~~v~lWd~~~~---~l~tl~gH~~~V~s-vafsp-dg~~LaSgS~d~~ 1350 (1678)
-.+.||..=|.. ...++.+ ++++|.|+++++|+-.+. ....+.+|.+-|.+ +++-+ ++-.+++|++
T Consensus 8 ~~l~gH~~DVr~v~~~~~~~-----i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~--- 79 (745)
T KOG0301|consen 8 HELEGHKSDVRAVAVTDGVC-----IISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGM--- 79 (745)
T ss_pred EEeccCccchheeEecCCeE-----EeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecc---
Confidence 356678766654 2233445 999999999999997644 33568899998888 88886 4446999998
Q ss_pred CCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE-EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCcccc
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429 (1678)
Q Consensus 1351 ~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l-aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~ 1429 (1678)
|.+|.+|.+....++.+++||+..|.+++...++..+ +|.|.|+++|-. +++...+.+|
T Consensus 80 -D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~--~~l~~~l~gH----------------- 139 (745)
T KOG0301|consen 80 -DTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRI--GELVYSLQGH----------------- 139 (745)
T ss_pred -cceEEEEecCCCCchhhhhccccceeeeecCCcCceEecccccceEEecc--hhhhcccCCc-----------------
Confidence 9999999999999999999999999999976666645 777999999974 5665555554
Q ss_pred ccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEe
Q 000316 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1509 (1678)
Q Consensus 1430 ~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~ 1509 (1678)
...|+++.+-+ ++ .++|||.|.+||+|.- ++.+++|.+|. +.|+.+++
T Consensus 140 -------------~asVWAv~~l~----------e~-~~vTgsaDKtIklWk~--~~~l~tf~gHt------D~VRgL~v 187 (745)
T KOG0301|consen 140 -------------TASVWAVASLP----------EN-TYVTGSADKTIKLWKG--GTLLKTFSGHT------DCVRGLAV 187 (745)
T ss_pred -------------chheeeeeecC----------CC-cEEeccCcceeeeccC--Cchhhhhccch------hheeeeEE
Confidence 33455554443 34 8999999999999985 78888898754 45888887
Q ss_pred eCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 000316 1510 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1510 ~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
- ++..+++++.||.|++||+ +|+++....||+..|.+++ ..+++.++|+|.|++++||+.. .
T Consensus 188 l------------~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~----e 250 (745)
T KOG0301|consen 188 L------------DDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD----E 250 (745)
T ss_pred e------------cCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC----c
Confidence 4 2346899999999999999 8999999999999999999 8888999999999999999876 4
Q ss_pred CCeEeecCCCCEEEEE-ecCCEEEEEeCCC-eEEEecC
Q 000316 1589 QPTVFKGHTNGISGFS-VWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1589 ~~~~l~gH~~~V~afS-pdg~~LaSgs~D~-I~vwdl~ 1624 (1678)
+.+.+.-.+-.|++.. .....+++|+.|| ||||..+
T Consensus 251 ~~q~I~lPttsiWsa~~L~NgDIvvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 251 CVQVITLPTTSIWSAKVLLNGDIVVGGSDGRVRVFTVD 288 (745)
T ss_pred eEEEEecCccceEEEEEeeCCCEEEeccCceEEEEEec
Confidence 4556665666777532 2244567777777 9999976
|
|
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-23 Score=243.54 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=156.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+... ....++..+|+|.+... .......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~aiK~~~~~-~~~~~~~~~~--------~ei~~l~~l~h~~iv~~ 73 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGL-LPYEPFTMVAVKMLKEE-ASADMQADFQ--------REAALMAEFDHPNIVKL 73 (288)
T ss_pred hHhceecccccccccccEEEEEEccc-CCCCcceeEEEEecCCC-cCHHHHHHHH--------HHHHHHHhcCCCchheE
Confidence 45799999999999999999986421 11235678999998653 2233334444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCcee
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP--------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 299 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~--------------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiH 299 (1678)
++++..+...++||||++ |+|.+++.... ...+++..+..++.|++.||.|||++|++|
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H 153 (288)
T cd05050 74 LGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVH 153 (288)
T ss_pred EEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 999999999999999999 49999997321 124678888999999999999999999999
Q ss_pred cCCCCCCeEecCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 300 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 300 RDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||||+|||++.++ .+||+|||+++......... .......+..|+|||.+.+..++.++|+|+.|++.
T Consensus 154 ~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 222 (288)
T cd05050 154 RDLATRNCLVGENM--VVKIADFGLSRNIYSADYYK---------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVL 222 (288)
T ss_pred ccccHhheEecCCC--ceEECccccceecccCcccc---------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHH
Confidence 99999999999999 89999999987533111000 00111235679999999888999999999999665
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.1e-23 Score=237.17 Aligned_cols=189 Identities=17% Similarity=0.124 Sum_probs=152.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|.+.. .......+|+|.+...... .....+. +|+.+++.++||||+++++.+..
T Consensus 1 ~~ig~g~~~~v~~~~~~~---~~~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~- 67 (257)
T cd05040 1 KKLGDGSFGVVRRGEWST---SGGKVIPVAVKCLKSDKLS-DIMDDFL--------KEAAIMHSLDHENLIRLYGVVLT- 67 (257)
T ss_pred CcCCccCcccEEeeeEec---CCCCceEEEEeecCCcccH-HHHHHHH--------HHHHHHhhcCCCCccceeEEEcC-
Confidence 468999999999998642 1123457999999765433 3333444 89999999999999999999988
Q ss_pred CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
...++||||++ ++|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~--~~kl~dfg~~~ 145 (257)
T cd05040 68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD--KVKIGDFGLMR 145 (257)
T ss_pred CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCC--EEEeccccccc
Confidence 88999999998 5999999854335688999999999999999999999999999999999999998 89999999998
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
........... .....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 146 ~~~~~~~~~~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l 190 (257)
T cd05040 146 ALPQNEDHYVM--------EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTL 190 (257)
T ss_pred cccccccceec--------ccCCCCCceecCHHHhcccCcCchhhhHHHHHHH
Confidence 65421111000 1112356789999999999999999999999554
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-23 Score=242.58 Aligned_cols=185 Identities=16% Similarity=0.108 Sum_probs=143.4
Q ss_pred eeeeeCcEEEEEEEecCCCC------------------ccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhc
Q 000316 169 FIGICSYSIFEELASNFLSG------------------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1678)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~------------------~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~ 230 (1678)
+||+|+||.||+|......+ .......||+|.+.... ......+. +|+.+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~~~ 71 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFF--------ETASLMS 71 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHH--------HHHHHHh
Confidence 69999999999987432110 11223568999886431 12223333 8899999
Q ss_pred cCCCCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe
Q 000316 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 309 (1678)
.++||||+++++++.++...++||||+++ +|..++.. ..+.+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 72 ~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill 150 (274)
T cd05076 72 QVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILL 150 (274)
T ss_pred cCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEE
Confidence 99999999999999999999999999995 89888873 34568899999999999999999999999999999999999
Q ss_pred cCCCc-----eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc-ccccccccccccCccc
Q 000316 310 TDSCW-----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 310 ~~~g~-----~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~y~~~~d~W~~G~is 379 (1678)
+..+. ..+|++|||+++..... ....++..|+|||.+.+ ..++.++|+|+.|.+.
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~---------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l 211 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR---------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTL 211 (274)
T ss_pred eccCcccCccceeeecCCccccccccc---------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHH
Confidence 86431 24899999998643211 01125678999998865 5689999999999654
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.89 E-value=5e-23 Score=242.39 Aligned_cols=197 Identities=16% Similarity=0.100 Sum_probs=155.6
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+... ....+..|++|.+... ........+. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~--~~~~~~~v~~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 73 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDE--KPGKEEEVFVKTVKDH-ASEIQVTLLL--------QESCLLYGLSHQNILPI 73 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecC--CCCceeEEEEEEccCC-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 46899999999999999999996420 1123678999998643 2333333344 89999999999999999
Q ss_pred eeEEEe-CCeEEEeccCCC-CCHHHHHhhCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 241 LGLLKT-SGLITSVIPKTP-YTLENILQFSPN------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 241 ~~~~~~-~~~~~lVmEy~~-g~L~~~l~~~~~------~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
++++.. +...++++||++ ++|.+++..... ..+++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~ 153 (280)
T cd05043 74 LHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE 153 (280)
T ss_pred EEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC
Confidence 998765 567899999998 599999874322 458899999999999999999999999999999999999999
Q ss_pred CceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+ .+||+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|++.
T Consensus 154 ~--~~kl~d~g~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l 209 (280)
T cd05043 154 L--QVKITDNALSRDLFPMDYHCL---------GDNENRPVKWMALESLVNKEYSSASDVWSFGVLL 209 (280)
T ss_pred C--cEEECCCCCcccccCCceEEe---------CCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH
Confidence 8 899999999985432111000 0112346679999999988999999999999553
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.9e-23 Score=236.76 Aligned_cols=186 Identities=19% Similarity=0.139 Sum_probs=147.9
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
++||+|+||.||+|.... ....+..+|+|.+...... ....++. +|+.+++.+.||||+++++++. .
T Consensus 1 ~~ig~G~~g~v~~~~~~~---~~~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~-~ 67 (257)
T cd05060 1 KELGHGNFGSVVKGVYLM---KSGKEVEVAVKTLKQEHIA-AGKKEFL--------REASVMAQLDHPCIVRLIGVCK-G 67 (257)
T ss_pred CccCccCceeEEEeEeec---cCCCcceEEEEecccccch-HHHHHHH--------HHHHHHHhcCCCCeeeEEEEEc-C
Confidence 479999999999998542 1123478999998765433 2333444 8999999999999999999876 4
Q ss_pred CeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
+..++||||++ |+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~--~~kl~df~~~~ 143 (257)
T cd05060 68 EPLMLVMELAPLGPLLKYLKK--RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH--QAKISDFGMSR 143 (257)
T ss_pred CceEEEEEeCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC--cEEeccccccc
Confidence 56899999998 599999983 44689999999999999999999999999999999999999999 89999999998
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
......... .......++..|+|||.+.+..++.++|+|+.|.+
T Consensus 144 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 187 (257)
T cd05060 144 ALGAGSDYY--------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVT 187 (257)
T ss_pred eeecCCccc--------ccccCccccccccCHHHhcCCCCCccchHHHHHHH
Confidence 543211110 00111123457999999998899999999999954
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.5e-23 Score=237.85 Aligned_cols=182 Identities=18% Similarity=0.201 Sum_probs=150.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||++. ..+..+|+|.+.... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--------~~~~~~~iK~~~~~~----~~~~~~--------~e~~~l~~~~~~~i~~~ 64 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--------YTGQKVAVKNIKCDV----TAQAFL--------EETAVMTKLHHKNLVRL 64 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--------cCCCceEEEeecCcc----hHHHHH--------HHHHHHHhCCCCCcCeE
Confidence 4679999999999999999876 356789999986421 122333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++..+ ..++||||+++ +|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 65 ~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~--~~kl 141 (254)
T cd05083 65 LGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG--VAKV 141 (254)
T ss_pred EEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--cEEE
Confidence 9998765 47999999995 999999855455688999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++...... . ....+..|+|||.+.+..++...|+|+.|.+.
T Consensus 142 ~Dfg~~~~~~~~~-------~-------~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l 187 (254)
T cd05083 142 SDFGLARVGSMGV-------D-------NSKLPVKWTAPEALKHKKFSSKSDVWSYGVLL 187 (254)
T ss_pred CCCccceeccccC-------C-------CCCCCceecCHHHhccCCcCchhhHHHHHHHH
Confidence 9999987533110 0 01134579999999888999999999999664
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-22 Score=238.09 Aligned_cols=188 Identities=14% Similarity=0.087 Sum_probs=144.0
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+++.. .......+++|.+.... .......++ +|+.+++.++||||+++++.+.+.
T Consensus 1 ~~lg~G~~g~v~~~~~~----~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~~~~~~~~ 67 (268)
T cd05086 1 QEIGNGWFGKVLLSEIY----TDTGVARVVVKELKANA-SSKEQNEFL--------QQGDPYRILQHPNILQCLGQCVEA 67 (268)
T ss_pred CcCCCCcCceEEEEEEE----cCCCcceEEEEEecCCC-ChHHHHHHH--------HHHHHHhccCCcchhheEEEecCC
Confidence 36999999999999742 11234567788776532 222334454 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCC
Q 000316 248 GLITSVIPKTP-YTLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~~--~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGl 324 (1678)
...|+||||++ |+|.+++.... ....++..++.++.||+.||+|||+++|+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~--~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL--TVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc--cEEeccccc
Confidence 99999999999 59999997432 23456777889999999999999999999999999999999998 899999999
Q ss_pred cccCCCCCcccccCCCCcceeecccccCccccccccccc-------ccccccccccccCccc
Q 000316 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-------MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-------~~y~~~~d~W~~G~is 379 (1678)
++......... . .....++..|+|||++.. ..++.++|+|+.|.+.
T Consensus 146 ~~~~~~~~~~~---~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l 198 (268)
T cd05086 146 GPSRYKEDYIE---T------EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTL 198 (268)
T ss_pred ccccCcchhhh---c------ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHH
Confidence 86432111000 0 011235778999998753 3456789999999654
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.1e-22 Score=241.85 Aligned_cols=187 Identities=13% Similarity=0.111 Sum_probs=155.5
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||++.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~hp~i~~~ 81 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDV------ATGQEVAIKQMNLQQQ--PKKELII--------NEILVMRENKHPNIVNY 81 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEc------CCCCEEEEEEeccccc--hHHHHHH--------HHHHHHhhcCCCCeeeh
Confidence 578999999999999999999854 4577899999864322 2222333 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+..|+|+||+++ +|.+++. ...+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~---~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~--~~kL 156 (293)
T cd06647 82 LDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 156 (293)
T ss_pred hheeeeCCcEEEEEecCCCCcHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC--CEEE
Confidence 9999999999999999985 9999987 23578889999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++........ ......+++.|+|||.+....++.++|+|+.|.+.
T Consensus 157 ~dfg~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll 205 (293)
T cd06647 157 TDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMA 205 (293)
T ss_pred ccCcceeccccccc-----------ccccccCChhhcCchhhccCCCCchhhHHHHHHHH
Confidence 99999875332110 11123477889999999888899999999999553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.4e-23 Score=236.02 Aligned_cols=193 Identities=21% Similarity=0.172 Sum_probs=155.5
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
+++.+.||+|+||.||+|.+....+ ..+..+|+|.+..... ......+. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~--~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 69 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSG--EKEVEVAVKTLKEDAD-EQQIEEFL--------REARIMRKLDHPNIVKLLGV 69 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCC--CCCceEEEEEccCCCC-hHHHHHHH--------HHHHHHHhcCCCchheEEEE
Confidence 3567899999999999999652111 2358899999965422 21333444 89999999999999999999
Q ss_pred EEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEec
Q 000316 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DF 322 (1678)
+.+.+..+++|||+++ +|.+++.......+++..+..++.|++.||+|||++|++||||||+||+++.++ .+||+||
T Consensus 70 ~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~--~~~l~df 147 (258)
T smart00219 70 CTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL--VVKISDF 147 (258)
T ss_pred EcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC--eEEEccc
Confidence 9999999999999985 999999843333389999999999999999999999999999999999999999 8999999
Q ss_pred CCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+++........... .-.++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 148 g~~~~~~~~~~~~~~----------~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~ 194 (258)
T smart00219 148 GLSRDLYDDDYYKKK----------GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLL 194 (258)
T ss_pred CCceecccccccccc----------cCCCcccccChHHhccCCCCcchhHHHHHHHH
Confidence 999865432111000 01156789999999888899999999999664
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=224.60 Aligned_cols=265 Identities=20% Similarity=0.251 Sum_probs=226.4
Q ss_pred eEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEE
Q 000316 1300 FLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1678)
Q Consensus 1300 ~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~s 1378 (1678)
.+.||+.|+.+.++|.. ...+.+++||+-.|+++.|+++...++++|. |..|+||......+......|.++|+.
T Consensus 233 ~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa----d~~i~vws~~~~s~~~~~~~h~~~V~~ 308 (506)
T KOG0289|consen 233 KILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASA----DEIIRVWSVPLSSEPTSSRPHEEPVTG 308 (506)
T ss_pred cceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCC----cceEEeeccccccCcccccccccccee
Confidence 38899999999999988 7789999999999999999999999999998 899999999888888888899999999
Q ss_pred EeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCce
Q 000316 1379 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1678)
Q Consensus 1379 V~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~v 1456 (1678)
+..+|.+.++ +|.||+..+.|.++|.++....... +.-.+
T Consensus 309 ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~--------------------------------------s~v~~ 350 (506)
T KOG0289|consen 309 LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDET--------------------------------------SDVEY 350 (506)
T ss_pred eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecc--------------------------------------cccee
Confidence 9999999998 6779999999999999876554311 01126
Q ss_pred eEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeE
Q 000316 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1678)
Q Consensus 1457 t~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I 1536 (1678)
++.+++|||..+.+|+.|+.|++||+.++..+..|.+| .+.|.+|+|+ -+|-|+|++++|+.|
T Consensus 351 ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpgh------t~~vk~i~Fs-----------ENGY~Lat~add~~V 413 (506)
T KOG0289|consen 351 TSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGH------TGPVKAISFS-----------ENGYWLATAADDGSV 413 (506)
T ss_pred EEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCC------CCceeEEEec-----------cCceEEEEEecCCeE
Confidence 78888899999999999999999999999988888865 4568899885 456799999999999
Q ss_pred EEEeCCCCcEEEEEeccC-CCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEE
Q 000316 1537 RLFDVRSGNVIASWRAHD-GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVIS 1612 (1678)
Q Consensus 1537 ~lWD~~tg~~i~~l~gH~-~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaS 1612 (1678)
++||+|..+..+++.-.+ ..|.++. ...|.+|+.+|.|=+|++++-.+..+..+..+..|.+..+. |..+.+++++
T Consensus 414 ~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s 493 (506)
T KOG0289|consen 414 KLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLAS 493 (506)
T ss_pred EEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhhhcccccceeeecccceEEee
Confidence 999999988888776432 4688998 88999999999888888888766666777788888876663 7788899999
Q ss_pred EeCCC-eEEEec
Q 000316 1613 ISNNK-IGLSSL 1623 (1678)
Q Consensus 1613 gs~D~-I~vwdl 1623 (1678)
+|.|. ++++.+
T Consensus 494 ~smd~~l~~~a~ 505 (506)
T KOG0289|consen 494 TSMDAILRLYAL 505 (506)
T ss_pred ccchhheEEeec
Confidence 99999 787754
|
|
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=238.19 Aligned_cols=205 Identities=16% Similarity=0.114 Sum_probs=160.9
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|+.... ....+..+|+|.+...... .....+. +|+++++.++||||+++
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~--~~~~~~~~avK~~~~~~~~-~~~~~~~--------~ei~~l~~l~~~~i~~~ 71 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPL--GDNTGEQVAVKSLNHSGEE-QHRSDFE--------REIEILRTLDHENIVKY 71 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCC--CCCCceEEEEEEeccccch-HHHHHHH--------HHHHHHHhCCCCChheE
Confidence 35688999999999999999985421 1246789999998764332 2233444 89999999999999999
Q ss_pred eeEEEe--CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeE
Q 000316 241 LGLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 241 ~~~~~~--~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~l 317 (1678)
++++.. ....++||||+++ +|.+++... ...++...+..++.|++.||+|||++||+||||||+||+++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~ 148 (284)
T cd05038 72 KGVCEKPGGRSLRLIMEYLPSGSLRDYLQRH-RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED--LV 148 (284)
T ss_pred EeeeecCCCCceEEEEecCCCCCHHHHHHhC-ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CE
Confidence 999887 5589999999985 999999843 33588999999999999999999999999999999999999998 89
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
||+|||+++........... .....++..|+|||.+.+..++...|+|+.|++ .+.++.|+.
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~--------~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~-------l~el~tg~~ 210 (284)
T cd05038 149 KISDFGLAKVLPEDKDYYYV--------KEPGESPIFWYAPECLRTSKFSSASDVWSFGVT-------LYELFTYGD 210 (284)
T ss_pred EEcccccccccccCCcceec--------cCCCCCcccccCcHHHccCCCCcccchHHHhhh-------hheeeccCC
Confidence 99999999865421111000 011124457999999988899999999999955 445556653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.6e-22 Score=219.20 Aligned_cols=285 Identities=12% Similarity=0.149 Sum_probs=215.8
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC------------------C-ceeEEeccccccEEEEE
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK------------------A-SILSSIRAHHGALRSVA 1334 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~------------------~-~~l~tl~gH~~~V~sva 1334 (1678)
+..+..|+..+.+ ||+||.+ +||||.|-+|+|.|++ + .++++|-.|.+.|+++.
T Consensus 105 t~ylt~HK~~cR~aafs~DG~l-----vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~ 179 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSL-----VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLD 179 (430)
T ss_pred eEEEeecccceeeeeeCCCCcE-----EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCccccee
Confidence 3455668877764 9999998 9999999999999965 1 26889999999999999
Q ss_pred EecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEe--cCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEec
Q 000316 1335 VGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY--GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFA 1410 (1678)
Q Consensus 1335 fspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~--gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~ 1410 (1678)
|+|.+..|+||+. |++|+++|.......+.++ .-..+|.+|.|+|.|.++ ++.-.++|+||++|-+|...-.
T Consensus 180 FHPre~ILiS~sr----D~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan 255 (430)
T KOG0640|consen 180 FHPRETILISGSR----DNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN 255 (430)
T ss_pred ecchhheEEeccC----CCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC
Confidence 9999999999998 9999999997654433332 356789999999999988 4456899999999887743222
Q ss_pred ccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEE
Q 000316 1411 EQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL 1490 (1678)
Q Consensus 1411 ~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~ 1490 (1678)
. + ..|++ .++++.+++.|++.++|+.||.||+||--+++|+.+
T Consensus 256 P---d------------------------~qht~----------ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t 298 (430)
T KOG0640|consen 256 P---D------------------------DQHTG----------AITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRT 298 (430)
T ss_pred c---c------------------------ccccc----------ceeEEEecCCccEEEEeccCCcEEeeccccHHHHHH
Confidence 1 1 11222 256777777899999999999999999999999999
Q ss_pred eeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccC--CCe----EEEEcCC
Q 000316 1491 WRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD--GYV----TKLAAPE 1564 (1678)
Q Consensus 1491 l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~--~~V----~svaspd 1564 (1678)
+...++. +.|.+..|. .+|+++.+.+.|..|++|.+.+|+++..+.|-. +.. .++-...
T Consensus 299 ~~~AH~g----sevcSa~Ft-----------kn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNht 363 (430)
T KOG0640|consen 299 IGNAHGG----SEVCSAVFT-----------KNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHT 363 (430)
T ss_pred HHhhcCC----ceeeeEEEc-----------cCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCc
Confidence 8754432 223333332 456899999999999999999999999887542 111 1111223
Q ss_pred CCEEEEE-eCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEEEEEeCCC-eEEEe
Q 000316 1565 DHLLVSS-SLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1565 g~~LaSg-S~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~vwd 1622 (1678)
..+++.- -..+.+.-||.++.....+ .--||++.+.. -||.+.-+.+||+|. +|+|-
T Consensus 364 EdyVl~pDEas~slcsWdaRtadr~~l-~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 364 EDYVLFPDEASNSLCSWDARTADRVAL-LSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred cceEEccccccCceeeccccchhhhhh-cccCCCCCceEEEeCCCCCceeeecccceeeeee
Confidence 3444443 3457799999999742222 33589999986 689999999999999 99996
|
|
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-22 Score=234.94 Aligned_cols=187 Identities=18% Similarity=0.197 Sum_probs=153.5
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCccccee
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|++.+.||+|+||.||++.+. .+..+|+|.+...... ..++. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-------~~~~~~~k~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-------EKRKVAIKTIREGAMS---EEDFI--------EEAQVMMKLSHPKLVQLY 65 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-------CCCeEEEEECCCCCCC---HHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 47999999999999999999853 3567999998654332 22344 899999999999999999
Q ss_pred eEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEE
Q 000316 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 242 ~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~ 320 (1678)
+++......++||||+++ +|.+++.. ....+++..++.++.|++.||+|||++|++||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~--~~~l~ 142 (256)
T cd05112 66 GVCTERSPICLVFEFMEHGCLSDYLRA-QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ--VVKVS 142 (256)
T ss_pred EEEccCCceEEEEEcCCCCcHHHHHHh-CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC--eEEEC
Confidence 999999999999999995 99999874 334578999999999999999999999999999999999999988 89999
Q ss_pred ecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|||+++........ ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 143 d~g~~~~~~~~~~~----------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l 191 (256)
T cd05112 143 DFGMTRFVLDDQYT----------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLM 191 (256)
T ss_pred CCcceeecccCccc----------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHH
Confidence 99998754311000 00111245679999999988899999999999554
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=237.46 Aligned_cols=193 Identities=17% Similarity=0.159 Sum_probs=152.8
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||.||+|.+.-. ......+|+|..... ........+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~---~~~~~~v~ik~~~~~-~~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 72 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSP---ENEKIAVAVKTCKNC-TSPSVREKFL--------QEAYIMRQFDHPHIVKL 72 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecC---CCCCcceEEEecCCc-CCHHHHHHHH--------HHHHHHHhCCCCchhce
Confidence 35699999999999999999985311 123456899988653 2223333444 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++.+ +..|+||||++ |+|.+++... ...++...+..++.|++.||+|||++|++||||||+|||++.++ .+||
T Consensus 73 ~~~~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l 148 (270)
T cd05056 73 IGVITE-NPVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD--CVKL 148 (270)
T ss_pred eEEEcC-CCcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC--CeEE
Confidence 999875 45789999998 5999999742 34589999999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++......... .....++..|+|||.+....++.++|+|+.|.+.
T Consensus 149 ~d~g~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 198 (270)
T cd05056 149 GDFGLSRYLEDESYYK----------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 198 (270)
T ss_pred ccCceeeeccccccee----------cCCCCccccccChhhhccCCCCchhhhHHHHHHH
Confidence 9999998644211000 0011234579999999888899999999999664
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-21 Score=244.42 Aligned_cols=284 Identities=15% Similarity=0.184 Sum_probs=225.1
Q ss_pred ccCCCC-ceEe--ecCCCCCCCCCeEEEEe--CCCCEEEEeCCC-------------ceeEEeccccccEEEEEEecCCC
Q 000316 1279 LMKCEP-WFWF--PTPAASWDGPDFLGRVG--GLKDESPWKIKA-------------SILSSIRAHHGALRSVAVGQDEC 1340 (1678)
Q Consensus 1279 l~gH~~-~V~~--fSpdg~~~~~~~LasgS--~D~~v~lWd~~~-------------~~l~tl~gH~~~V~svafspdg~ 1340 (1678)
..+|.+ .|++ .+|||.. +|||+ .|+.+++|+.+. ..+.+...|.++|+||.|++||+
T Consensus 8 wv~H~~~~IfSIdv~pdg~~-----~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~ 82 (942)
T KOG0973|consen 8 WVNHNEKSIFSIDVHPDGVK-----FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGS 82 (942)
T ss_pred ccccCCeeEEEEEecCCcee-----EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCC
Confidence 344554 3443 8899987 99999 999999999651 13556778999999999999999
Q ss_pred EEEEEecCCCCCCeEEEEeCCC------------------CeEEEEEecCCccEEEEeecCCCCcEEeC--CCcEEEEEC
Q 000316 1341 TVFTAGIGPGFKGTVQKWELTR------------------INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNS 1400 (1678)
Q Consensus 1341 ~LaSgS~d~~~DgtVrlWDl~t------------------g~~l~~l~gH~~~V~sV~fs~~~~~laS~--DgtVrIWD~ 1400 (1678)
+||+||+ |+.|-||+... .++...+.||+..|.+|+|+|++.+++|+ |++|.|||.
T Consensus 83 ~lAsGSD----D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~ 158 (942)
T KOG0973|consen 83 YLASGSD----DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNA 158 (942)
T ss_pred eEeeccC----cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcc
Confidence 9999997 89999999762 14678899999999999999999999776 999999999
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
.+.+++.++.+|. +.|..+.|+ |-|+++++-+.|++|++|
T Consensus 159 ~tF~~~~vl~~H~------------------------------s~VKGvs~D----------P~Gky~ASqsdDrtikvw 198 (942)
T KOG0973|consen 159 KTFELLKVLRGHQ------------------------------SLVKGVSWD----------PIGKYFASQSDDRTLKVW 198 (942)
T ss_pred ccceeeeeeeccc------------------------------ccccceEEC----------CccCeeeeecCCceEEEE
Confidence 9999988888764 234445555 459999999999999999
Q ss_pred ECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEec----CCeEEEEeCCCCcEEEEEeccCCC
Q 000316 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS----SGQCRLFDVRSGNVIASWRAHDGY 1556 (1678)
Q Consensus 1481 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~----Dg~I~lWD~~tg~~i~~l~gH~~~ 1556 (1678)
++.+....+.+.++...+........+ +|+|||.+|+++.. -.++.|.+-.+.+.-..+-||..+
T Consensus 199 rt~dw~i~k~It~pf~~~~~~T~f~Rl-----------SWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p 267 (942)
T KOG0973|consen 199 RTSDWGIEKSITKPFEESPLTTFFLRL-----------SWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAP 267 (942)
T ss_pred EcccceeeEeeccchhhCCCcceeeec-----------ccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCc
Confidence 988877888877665543333444444 45578889988753 347889998888888999999999
Q ss_pred eEEEE-cC------CC-------C----EEEEEeCCCcEEEEEcCCCCCCCCeEe-ecCCCCEE--EEEecCCEEEEEeC
Q 000316 1557 VTKLA-AP------ED-------H----LLVSSSLDKTLRIWDLRRNWPSQPTVF-KGHTNGIS--GFSVWGQDVISISN 1615 (1678)
Q Consensus 1557 V~sva-sp------dg-------~----~LaSgS~DgtI~IWDl~~~~~~~~~~l-~gH~~~V~--afSpdg~~LaSgs~ 1615 (1678)
+.++. .| .. . .+|+||.|++|.||..... +++... .-....|. +|+|||-.|..||-
T Consensus 268 ~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~--RPl~vi~~lf~~SI~DmsWspdG~~LfacS~ 345 (942)
T KOG0973|consen 268 VEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP--RPLFVIHNLFNKSIVDMSWSPDGFSLFACSL 345 (942)
T ss_pred eEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC--CchhhhhhhhcCceeeeeEcCCCCeEEEEec
Confidence 99998 43 11 1 6889999999999998665 444322 23345666 59999999999999
Q ss_pred CC-eEEEecC
Q 000316 1616 NK-IGLSSLS 1624 (1678)
Q Consensus 1616 D~-I~vwdl~ 1624 (1678)
|| |.+..++
T Consensus 346 DGtV~~i~Fe 355 (942)
T KOG0973|consen 346 DGTVALIHFE 355 (942)
T ss_pred CCeEEEEEcc
Confidence 99 9999876
|
|
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=242.31 Aligned_cols=195 Identities=17% Similarity=0.161 Sum_probs=151.7
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+..+.||+|+||.||+|.+... + ......+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~-~-~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~niv~~ 74 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPE-G-ETVKIPVAIKILNETT-GPKANVEFM--------DEALIMASMDHPHLVRL 74 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecC-C-CcceeeEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCcccE
Confidence 45789999999999999999986421 1 0112467999886532 222222343 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++... ..++++||++ |+|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~~-~~~~v~e~~~~g~l~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~--~~kL 150 (303)
T cd05110 75 LGVCLSP-TIQLVTQLMPHGCLLDYVHE-HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN--HVKI 150 (303)
T ss_pred EEEEcCC-CceeeehhcCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC--ceEE
Confidence 9998754 4678999999 699999873 334578899999999999999999999999999999999999988 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||+++.......... .....++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 151 ~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l 201 (303)
T cd05110 151 TDFGLARLLEGDEKEYN---------ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI 201 (303)
T ss_pred ccccccccccCcccccc---------cCCCccccccCCHHHhccCCCChHHHHHHHHHHH
Confidence 99999986432111100 0112246689999999989999999999999553
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=226.95 Aligned_cols=305 Identities=17% Similarity=0.230 Sum_probs=215.2
Q ss_pred CCCceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe----EEEEE-ecCCccEEEEeecCCCCcE-
Q 000316 1315 IKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN----CVSGY-YGHEEVVNDICVLSSSGRI- 1388 (1678)
Q Consensus 1315 ~~~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~----~l~~l-~gH~~~V~sV~fs~~~~~l- 1388 (1678)
+-+..-..+++|+..|.++++.|.|..++|||- |.+|++||+.... ..+.+ ..-...|+++.|++.+..+
T Consensus 155 IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~----Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iL 230 (641)
T KOG0772|consen 155 IPGSHEIQLKHGTKIVSALAVDPSGARFVSGSL----DYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQIL 230 (641)
T ss_pred CCccceEeccCCceEEEEeeecCCCceeeeccc----cceEEEEecccccccchhhhccCcccccccceeeecCCCCeEE
Confidence 345566789999999999999999999999995 9999999986431 12222 2345689999999988877
Q ss_pred -EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCE
Q 000316 1389 -ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER 1467 (1678)
Q Consensus 1389 -aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~ 1467 (1678)
+|+....+++|- .|..+..+..... .-..+.+..+|...+++.+|+|. +.+.
T Consensus 231 vvsg~aqakl~DR-dG~~~~e~~KGDQ-----------------YI~Dm~nTKGHia~lt~g~whP~---------~k~~ 283 (641)
T KOG0772|consen 231 VVSGSAQAKLLDR-DGFEIVEFSKGDQ-----------------YIRDMYNTKGHIAELTCGCWHPD---------NKEE 283 (641)
T ss_pred EEecCcceeEEcc-CCceeeeeeccch-----------------hhhhhhccCCceeeeeccccccC---------cccc
Confidence 788999999995 4655444332110 01234445567777777777775 4678
Q ss_pred EEEEECCCcEEEEECCCCe-eeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCc-
Q 000316 1468 LVVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN- 1545 (1678)
Q Consensus 1468 Lasgs~DgtVrlWDl~tg~-~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~- 1545 (1678)
+++++.||++|+||+..-+ .+..++..... +-.-.+...+| +++|+++|+|+.||.|.+||.++..
T Consensus 284 FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~-g~Rv~~tsC~~-----------nrdg~~iAagc~DGSIQ~W~~~~~~v 351 (641)
T KOG0772|consen 284 FLTCSYDGTLRIWDVNNTKSQLQVIKTKPAG-GKRVPVTSCAW-----------NRDGKLIAAGCLDGSIQIWDKGSRTV 351 (641)
T ss_pred eEEecCCCcEEEEecCCchhheeEEeeccCC-CcccCceeeec-----------CCCcchhhhcccCCceeeeecCCccc
Confidence 9999999999999997643 33444432211 12223444444 3677899999999999999986542
Q ss_pred -E-EEEEeccCC--CeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCC----CEEEEEecCCEEEEEeC-
Q 000316 1546 -V-IASWRAHDG--YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN----GISGFSVWGQDVISISN- 1615 (1678)
Q Consensus 1546 -~-i~~l~gH~~--~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~----~V~afSpdg~~LaSgs~- 1615 (1678)
+ +..-.+|.. .|++|. +++|++|+|-|.|+++++||++..+ +++.+..|-.. .=.+|||+.+++++|+.
T Consensus 352 ~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k-kpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~ 430 (641)
T KOG0772|consen 352 RPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK-KPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSA 430 (641)
T ss_pred ccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc-cchhhhcCCCccCCCCccccCCCceEEEecccc
Confidence 2 233347877 899999 9999999999999999999999864 44444333222 11269999999999863
Q ss_pred -----CC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1616 -----NK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1616 -----D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
-+ +.+||-. .....+.... ....|..+.|+|.-..+.+|+.||++++|
T Consensus 431 ~~~~~~g~L~f~d~~-----------t~d~v~ki~i---~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 431 PNGMTAGTLFFFDRM-----------TLDTVYKIDI---STASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred cCCCCCceEEEEecc-----------ceeeEEEecC---CCceEEEEeecchhhheeeecCCCceEEE
Confidence 22 6777732 1112222211 13457889999999999999999999986
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-20 Score=237.33 Aligned_cols=247 Identities=16% Similarity=0.165 Sum_probs=176.6
Q ss_pred CCeEEEEeCCCCeEEEEEecCCccEEEEeecCC-CCcEE--eCCCcEEEEECCCCce-eEEecccCccccccCCCCCCcc
Q 000316 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSS-SGRIA--SCDGTLHVWNSQTGKL-LSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1352 DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~-~~~la--S~DgtVrIWD~~tg~~-~~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
++.|++|+..+...+..+.+|.+.|.+++|+|+ +..++ |.|++|+|||+.++.. ...+..
T Consensus 53 ~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~---------------- 116 (568)
T PTZ00420 53 IGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKD---------------- 116 (568)
T ss_pred eeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcccccccc----------------
Confidence 899999999888888999999999999999997 55664 4499999999986532 111100
Q ss_pred ccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCE-EEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceE
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER-LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~-Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~s 1506 (1678)
.+..+.-+...+++++|+|++.. +++|+.|++|++||+++++.+..+.. ...|.+
T Consensus 117 -----------------p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------~~~V~S 172 (568)
T PTZ00420 117 -----------------PQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------PKKLSS 172 (568)
T ss_pred -----------------ceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-------CCcEEE
Confidence 00011112233566666666765 57899999999999999987766642 234788
Q ss_pred EEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE------cCCCCEEEEEeCCC----c
Q 000316 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA------APEDHLLVSSSLDK----T 1576 (1678)
Q Consensus 1507 va~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva------spdg~~LaSgS~Dg----t 1576 (1678)
++|+ ++|.+|++++.|+.|+|||+++++.+.++.+|.+.+.+.. ++++.+|+|+|.|+ +
T Consensus 173 lsws-----------pdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~ 241 (568)
T PTZ00420 173 LKWN-----------IKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMRE 241 (568)
T ss_pred EEEC-----------CCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccE
Confidence 8875 5668999999999999999999999999999998754432 37888999988775 7
Q ss_pred EEEEEcCCCCCCCCe--EeecCCCCEE-EE-EecCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccC
Q 000316 1577 LRIWDLRRNWPSQPT--VFKGHTNGIS-GF-SVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLS 1651 (1678)
Q Consensus 1577 I~IWDl~~~~~~~~~--~l~gH~~~V~-af-Spdg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~ 1651 (1678)
|+|||+++.. ..+. .+..+.+.+. .+ .++|.++++|+.|+ |++|++.. +.. ..+ ... .+..
T Consensus 242 VkLWDlr~~~-~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~-----~~~----~~l---~~~-~s~~ 307 (568)
T PTZ00420 242 MKLWDLKNTT-SALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSL-----GSI----RKV---NEY-KSCS 307 (568)
T ss_pred EEEEECCCCC-CceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccC-----CcE----Eee---ccc-ccCC
Confidence 9999999632 3333 3344444443 33 34488899999999 99999852 111 011 111 2556
Q ss_pred cEEEEEEecCCC
Q 000316 1652 VLSSISILPFSR 1663 (1678)
Q Consensus 1652 ~I~svafsPd~~ 1663 (1678)
++.+++|.|...
T Consensus 308 p~~g~~f~Pkr~ 319 (568)
T PTZ00420 308 PFRSFGFLPKQI 319 (568)
T ss_pred CccceEEccccc
Confidence 788899998653
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-20 Score=237.01 Aligned_cols=244 Identities=14% Similarity=0.170 Sum_probs=175.4
Q ss_pred ccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEE-------------EEEecCCccEEEEeecC-CCCcE--E
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV-------------SGYYGHEEVVNDICVLS-SSGRI--A 1389 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l-------------~~l~gH~~~V~sV~fs~-~~~~l--a 1389 (1678)
|-..|+....++|+..+++++. +..+..|+...+..+ ..+.||.+.|++++|+| ++..+ +
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~----~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSg 94 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACND----RFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTA 94 (493)
T ss_pred ceeccccccccCCCCCcEeECC----ceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEE
Confidence 4456777778888777788775 677778886544332 14679999999999999 66666 4
Q ss_pred eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCC-CEE
Q 000316 1390 SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECV-ERL 1468 (1678)
Q Consensus 1390 S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g-~~L 1468 (1678)
|.|++|++||+.++........ .+....+|... |.+++|+|++ +.|
T Consensus 95 S~DgtIkIWdi~~~~~~~~~~~-----------------------~l~~L~gH~~~----------V~~l~f~P~~~~iL 141 (493)
T PTZ00421 95 SEDGTIMGWGIPEEGLTQNISD-----------------------PIVHLQGHTKK----------VGIVSFHPSAMNVL 141 (493)
T ss_pred eCCCEEEEEecCCCccccccCc-----------------------ceEEecCCCCc----------EEEEEeCcCCCCEE
Confidence 5599999999976532110000 00111223334 4455555554 689
Q ss_pred EEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEE
Q 000316 1469 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1548 (1678)
Q Consensus 1469 asgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~ 1548 (1678)
++|+.|++|++||+++++.+..+.+| ...|.+++|+ ++|.+|++|+.||+|++||+++++.+.
T Consensus 142 aSgs~DgtVrIWDl~tg~~~~~l~~h------~~~V~sla~s-----------pdG~lLatgs~Dg~IrIwD~rsg~~v~ 204 (493)
T PTZ00421 142 ASAGADMVVNVWDVERGKAVEVIKCH------SDQITSLEWN-----------LDGSLLCTTSKDKKLNIIDPRDGTIVS 204 (493)
T ss_pred EEEeCCCEEEEEECCCCeEEEEEcCC------CCceEEEEEE-----------CCCCEEEEecCCCEEEEEECCCCcEEE
Confidence 99999999999999999988888754 4458888886 456899999999999999999999999
Q ss_pred EEeccCCCeE-EEE-cCCCCEEEEEe----CCCcEEEEEcCCCCCCCCeEeecCCC-CEE--EEEecCCEEEEEe-CCC-
Q 000316 1549 SWRAHDGYVT-KLA-APEDHLLVSSS----LDKTLRIWDLRRNWPSQPTVFKGHTN-GIS--GFSVWGQDVISIS-NNK- 1617 (1678)
Q Consensus 1549 ~l~gH~~~V~-sva-spdg~~LaSgS----~DgtI~IWDl~~~~~~~~~~l~gH~~-~V~--afSpdg~~LaSgs-~D~- 1617 (1678)
.+.+|.+.+. .+. .+++..+++++ .|++|++||+++.. ........+.. .+. .|+++++.|++|+ .|+
T Consensus 205 tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~ 283 (493)
T PTZ00421 205 SVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-SPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGN 283 (493)
T ss_pred EEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-CceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCe
Confidence 9999987543 333 66767776654 47999999998753 23333333333 333 4889999999887 488
Q ss_pred eEEEecC
Q 000316 1618 IGLSSLS 1624 (1678)
Q Consensus 1618 I~vwdl~ 1624 (1678)
|++||+.
T Consensus 284 Iriwdl~ 290 (493)
T PTZ00421 284 IRCFELM 290 (493)
T ss_pred EEEEEee
Confidence 9999986
|
|
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=233.87 Aligned_cols=184 Identities=15% Similarity=0.117 Sum_probs=149.3
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
++||+|+||.||+|.+. . +..||+|.+...... .....+. +|+++++.++||||+++++++.+.
T Consensus 1 ~~lg~g~~g~v~~~~~~------~-~~~v~~K~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVLK------G-NTEVAVKTCRSTLPP-DLKRKFL--------QEAEILKQYDHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEEe------C-CCcEEEEeccccCCH-HHHHHHH--------HHHHHHHhCCCCCeEEEEEEEecC
Confidence 47999999999999853 3 788999998754322 2333444 899999999999999999999999
Q ss_pred CeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcc
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~ 326 (1678)
...++||||++| +|.+++.. ....++...+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+++
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~--~~~l~d~g~~~ 141 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRK-KKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC--cEEEeeccccc
Confidence 999999999985 99999974 234678899999999999999999999999999999999999999 89999999998
Q ss_pred cCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
......... . ......+..|+|||.+.+..++..+|+|+.|.+.
T Consensus 142 ~~~~~~~~~--~-------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~ 185 (251)
T cd05041 142 EEEGGIYTV--S-------DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILL 185 (251)
T ss_pred cccCCccee--c-------cccCcceeccCChHhhccCCCCcchhHHHHHHHH
Confidence 543111000 0 0001134569999999888999999999999654
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.9e-23 Score=239.06 Aligned_cols=186 Identities=16% Similarity=0.119 Sum_probs=144.5
Q ss_pred eeeeeeCcEEEEEEEecCCCCc-cccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEe
Q 000316 168 AFIGICSYSIFEELASNFLSGC-LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~-~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~ 246 (1678)
+.||+|+||.||+|.++..... ......+|+|.+... .......+. +|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~~~h~~iv~~~~~~~~ 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFF--------EAASMMSQLSHKHLVLNYGVCVC 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHH--------HHHHHHHhCCCCChhheeeEEEe
Confidence 4699999999999986421110 123455888887542 122223333 89999999999999999999999
Q ss_pred CCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc------eeEEE
Q 000316 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW------SWLYI 319 (1678)
Q Consensus 247 ~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~------~~lKL 319 (1678)
++..++||||+++ +|.+++.. ....+++..++.++.||+.||+|||++||+||||||+|||++.++. ..+|+
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKK-NKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 9999999999985 99999973 2345788999999999999999999999999999999999987762 13799
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCccccccccccc-ccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~y~~~~d~W~~G~is 379 (1678)
+|||++...... ....++..|+|||++.+ ..++..+|+|+.|.+.
T Consensus 150 ~d~g~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 195 (258)
T cd05078 150 SDPGISITVLPK---------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTL 195 (258)
T ss_pred cccccccccCCc---------------hhccccCCccCchhccCCCCCCchhhHHHHHHHH
Confidence 999998743310 11236778999998876 4578899999999554
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-20 Score=209.84 Aligned_cols=279 Identities=17% Similarity=0.183 Sum_probs=220.5
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeC--CCcE
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASC--DGTL 1395 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~--DgtV 1395 (1678)
.+.++.-.+.|+++.|+++|..+++++. |.+++|||..+|+++.++..+...|..++|......+ +|. |.+|
T Consensus 7 ak~f~~~~~~i~sl~fs~~G~~litss~----dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 7 AKVFRETNGKINSLDFSDDGLLLITSSE----DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred ccccccCCCceeEEEecCCCCEEEEecC----CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCce
Confidence 3445556788999999999999999887 8899999999999999999999999999997766665 444 9999
Q ss_pred EEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCC
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1678)
Q Consensus 1396 rIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~Dg 1475 (1678)
|.-++.+++.++.|.+|. ..|+.+..+|-+..+++++.|+
T Consensus 83 ryLsl~dNkylRYF~GH~----------------------------------------~~V~sL~~sP~~d~FlS~S~D~ 122 (311)
T KOG1446|consen 83 RYLSLHDNKYLRYFPGHK----------------------------------------KRVNSLSVSPKDDTFLSSSLDK 122 (311)
T ss_pred EEEEeecCceEEEcCCCC----------------------------------------ceEEEEEecCCCCeEEecccCC
Confidence 999999999999999874 2366777778789999999999
Q ss_pred cEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCC--cEEEEEe--
Q 000316 1476 SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG--NVIASWR-- 1551 (1678)
Q Consensus 1476 tVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg--~~i~~l~-- 1551 (1678)
+||+||++..++...+..... ..+|+. |.|-++|+|...+.|++||+|.- .+..++.
T Consensus 123 tvrLWDlR~~~cqg~l~~~~~--------pi~AfD-----------p~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~ 183 (311)
T KOG1446|consen 123 TVRLWDLRVKKCQGLLNLSGR--------PIAAFD-----------PEGLIFALANGSELIKLYDLRSFDKGPFTTFSIT 183 (311)
T ss_pred eEEeeEecCCCCceEEecCCC--------cceeEC-----------CCCcEEEEecCCCeEEEEEecccCCCCceeEccC
Confidence 999999998877665543221 223443 56678999998889999999973 3445554
Q ss_pred -ccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCE----E-EEEecCCEEEEEeCCC-eEEEec
Q 000316 1552 -AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI----S-GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1552 -gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V----~-afSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
+-....+.|. +|||++++-+...+.+.+.|.-+| ....++.++...- . +|+||++++++|++|+ |.+|++
T Consensus 184 ~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G--~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~~ 261 (311)
T KOG1446|consen 184 DNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDG--TVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWNL 261 (311)
T ss_pred CCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCC--cEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEEc
Confidence 3355678888 999999999999999999999998 4556676665533 3 4999999999999999 999998
Q ss_pred CCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1624 SKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1624 ~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
. .|....+ ..+ .+.+++.++.|+|..-++|+++ ..+-+|.
T Consensus 262 ~-----tg~~v~~-------~~~-~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~ 301 (311)
T KOG1446|consen 262 E-----TGKKVAV-------LRG-PNGGPVSCVRFNPRYAMFVSAS--SNLVFWL 301 (311)
T ss_pred C-----CCcEeeE-------ecC-CCCCCccccccCCceeeeeecC--ceEEEEe
Confidence 4 2322111 111 2567899999999999998774 5577773
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=237.36 Aligned_cols=183 Identities=19% Similarity=0.209 Sum_probs=145.1
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccc--eEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccC-CCCcccceeeEE
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDC--VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLL 244 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~--~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~l~~~~ 244 (1678)
+.||+|+||.||+|++. .++ ..+|+|.++.. ........+. +|+.+++++ +||||+++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~------~~~~~~~~~~k~~~~~-~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~~~~ 65 (270)
T cd05047 1 DVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNIINLLGAC 65 (270)
T ss_pred CcCCCCCCceEEEEEEc------CCCCeeEEEEEEcccc-CCHHHHHHHH--------HHHHHHHhhccCCCeeeEEEEE
Confidence 36899999999999864 233 35688887642 2222233343 899999999 899999999999
Q ss_pred EeCCeEEEeccCCC-CCHHHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEe
Q 000316 245 KTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 245 ~~~~~~~lVmEy~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl 309 (1678)
...+..|+||||++ |+|.+++.... ...++...++.++.|++.||+|||++||+||||||+|||+
T Consensus 66 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili 145 (270)
T cd05047 66 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 145 (270)
T ss_pred ecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE
Confidence 99999999999998 59999997422 1247888999999999999999999999999999999999
Q ss_pred cCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 310 ~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+.++ .+||+|||+++...... ... ....+..|+|||.+....++.+.|+|+.|.+.
T Consensus 146 ~~~~--~~kl~dfgl~~~~~~~~------~~~------~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 201 (270)
T cd05047 146 GENY--VAKIADFGLSRGQEVYV------KKT------MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 201 (270)
T ss_pred cCCC--eEEECCCCCccccchhh------hcc------CCCCccccCChHHHccCCCCchhhHHHHHHHH
Confidence 9999 89999999986322100 000 01134579999999988999999999999554
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-20 Score=196.44 Aligned_cols=275 Identities=19% Similarity=0.257 Sum_probs=215.2
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCC-------C------c---eeEEeccccccEEEEEEecCCCEEEEEecCCCC
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-------A------S---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-------~------~---~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~ 1351 (1678)
+|.|.|.+ .|.||..++.|+.... + . ..+.-+.|.++|.|++|||+|+.|++||.
T Consensus 39 ~fhp~g~l-----yavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsn---- 109 (350)
T KOG0641|consen 39 AFHPAGGL-----YAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSN---- 109 (350)
T ss_pred EecCCCce-----EEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCC----
Confidence 49999997 8999999999975421 1 1 22344679999999999999999999997
Q ss_pred CCeEEEEeCCCCeEE-----EEEecCCccEEEEeecCC---CC-cEEeC---CCcEEEEECCCCceeEEecccCcccccc
Q 000316 1352 KGTVQKWELTRINCV-----SGYYGHEEVVNDICVLSS---SG-RIASC---DGTLHVWNSQTGKLLSVFAEQSMDSLHG 1419 (1678)
Q Consensus 1352 DgtVrlWDl~tg~~l-----~~l~gH~~~V~sV~fs~~---~~-~laS~---DgtVrIWD~~tg~~~~~l~~~~~~~~~~ 1419 (1678)
|++|++--.+...|. ..+.-|.+.|.+++|..+ ++ .++|. |..|.+-|..+|+..+.+.+|.
T Consensus 110 dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sght------ 183 (350)
T KOG0641|consen 110 DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHT------ 183 (350)
T ss_pred CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCc------
Confidence 999999766544332 346779999999999643 33 34554 8888899999998887777653
Q ss_pred CCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCccc
Q 000316 1420 GSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1499 (1678)
Q Consensus 1420 ~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~ 1499 (1678)
+-|.++- +=+|-++++|+.|.+||+||++-..++.++.......+
T Consensus 184 ------------------------ghilaly-----------swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~g 228 (350)
T KOG0641|consen 184 ------------------------GHILALY-----------SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGG 228 (350)
T ss_pred ------------------------ccEEEEE-----------EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCC
Confidence 2232221 11366999999999999999999999988764322212
Q ss_pred -CCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcE
Q 000316 1500 -FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTL 1577 (1678)
Q Consensus 1500 -~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI 1577 (1678)
-++.|.+||.. |.|.+|++|..|..+.+||+|-|+.++.+..|+..|++|. +|...++++||.|.+|
T Consensus 229 lessavaav~vd-----------psgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~i 297 (350)
T KOG0641|consen 229 LESSAVAAVAVD-----------PSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKI 297 (350)
T ss_pred cccceeEEEEEC-----------CCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceE
Confidence 24668888875 5668999999999999999999999999999999999999 9999999999999999
Q ss_pred EEEEcCCCCC--CCCeEeecCCCCEE-E-EEecCCEEEEEeCCC-eEEEec
Q 000316 1578 RIWDLRRNWP--SQPTVFKGHTNGIS-G-FSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1578 ~IWDl~~~~~--~~~~~l~gH~~~V~-a-fSpdg~~LaSgs~D~-I~vwdl 1623 (1678)
++-|++.... ..+.....|.+.+. + |.|+.--+++.|.|+ +.+|.+
T Consensus 298 kltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 298 KLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred EEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEecc
Confidence 9999976431 22335566777655 3 888888899999999 999986
|
|
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.5e-22 Score=233.79 Aligned_cols=190 Identities=18% Similarity=0.173 Sum_probs=146.6
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEE-e
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK-T 246 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~-~ 246 (1678)
+.||+|+||.||+|.+.. .......+|+|.+... ........+. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~g~~g~v~~~~~~~---~~~~~~~~aiK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~~ 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLID---SDGQKIHCAVKSLNRI-TDLEEVEQFL--------KEGIIMKDFSHPNVLSLLGICLPS 68 (262)
T ss_pred CcccccCCceEEEEEEec---CCCceEEEEEEecCcc-CCHHHHHHHH--------HHHHHHccCCCCCcceEEEEeecC
Confidence 468999999999998531 1135678999998542 2222333444 8999999999999999999765 4
Q ss_pred CCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCc
Q 000316 247 SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1678)
Q Consensus 247 ~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA 325 (1678)
++..++||||+. |+|.+++... ....+...+..++.||+.||.|||+++|+||||||+|||+++++ .+||+|||++
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~--~~kl~dfg~~ 145 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF--TVKVADFGLA 145 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEECCcccc
Confidence 556899999998 5999999742 34467778888999999999999999999999999999999998 8999999999
Q ss_pred ccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+......... .. ......++..|+|||.+.+..++.++|+|+.|.+.
T Consensus 146 ~~~~~~~~~~----~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 192 (262)
T cd05058 146 RDIYDKEYYS----VH---NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 192 (262)
T ss_pred ccccCCccee----ec---ccccCcCCccccChhHhccCccchHHHHHHHHHHH
Confidence 8543211000 00 01122356789999999888999999999999543
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-21 Score=233.76 Aligned_cols=270 Identities=21% Similarity=0.338 Sum_probs=213.5
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEE--EEecCCccEEE-EeecC-CCCcE--EeCC
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS--GYYGHEEVVND-ICVLS-SSGRI--ASCD 1392 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~--~l~gH~~~V~s-V~fs~-~~~~l--aS~D 1392 (1678)
.-+.+.||+..|+.+++.++. .+++||. ||++++|+-..++.+. .+.+|.+.|.. +++.+ ++.++ ++.|
T Consensus 6 ls~~l~gH~~DVr~v~~~~~~-~i~s~sR----d~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D 80 (745)
T KOG0301|consen 6 LSHELEGHKSDVRAVAVTDGV-CIISGSR----DGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMD 80 (745)
T ss_pred eEEEeccCccchheeEecCCe-EEeecCC----CCceeeeeccCcccccceecccCcceeeccceeccccCcceEeeccc
Confidence 457899999999999988765 6888987 8999999987666553 57789998888 89875 33334 5569
Q ss_pred CcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEE
Q 000316 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1472 (1678)
Q Consensus 1393 gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs 1472 (1678)
++|.+|....+.+..++.+|... |+|++...++. +++||
T Consensus 81 ~~i~v~~~~~~~P~~~LkgH~sn----------------------------------------VC~ls~~~~~~-~iSgS 119 (745)
T KOG0301|consen 81 TTIIVFKLSQAEPLYTLKGHKSN----------------------------------------VCSLSIGEDGT-LISGS 119 (745)
T ss_pred ceEEEEecCCCCchhhhhccccc----------------------------------------eeeeecCCcCc-eEecc
Confidence 99999999999998888877532 44555555565 99999
Q ss_pred CCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEec
Q 000316 1473 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1678)
Q Consensus 1473 ~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~g 1552 (1678)
+|.|+++|-. +++...+.+ |...|.+++.-+ . +.++|||.|.+|++|.- ++.++++.|
T Consensus 120 WD~TakvW~~--~~l~~~l~g------H~asVWAv~~l~-----------e-~~~vTgsaDKtIklWk~--~~~l~tf~g 177 (745)
T KOG0301|consen 120 WDSTAKVWRI--GELVYSLQG------HTASVWAVASLP-----------E-NTYVTGSADKTIKLWKG--GTLLKTFSG 177 (745)
T ss_pred cccceEEecc--hhhhcccCC------cchheeeeeecC-----------C-CcEEeccCcceeeeccC--Cchhhhhcc
Confidence 9999999976 456666665 455677877642 2 37999999999999985 789999999
Q ss_pred cCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEEEE--ecCCEEEEEeCCC-eEEEecCCCCCC
Q 000316 1553 HDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFS--VWGQDVISISNNK-IGLSSLSKSADE 1629 (1678)
Q Consensus 1553 H~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afS--pdg~~LaSgs~D~-I~vwdl~~~~~~ 1629 (1678)
|.+.|+.++--++..++|||.||.|+.|++ ++ ..+.++.||+.-|.+++ .+++.++|++.|+ +++|+.. +
T Consensus 178 HtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~g--e~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~----e 250 (745)
T KOG0301|consen 178 HTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DG--EVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD----E 250 (745)
T ss_pred chhheeeeEEecCCCeEeecCCceEEEEec-cC--ceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC----c
Confidence 999999999444557899999999999999 45 67789999999999755 6788999999999 9999953 1
Q ss_pred CCcceeccceeeeeecCCCcc-CcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1630 DGQHRLVPQKLYMVDNGAKNL-SVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1630 ~g~~~~~~~kl~~~~~g~~h~-~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
..+.+. +- ..|+++++.++|.+. +|+.||.||||
T Consensus 251 ------~~q~I~-------lPttsiWsa~~L~NgDIv-vg~SDG~VrVf 285 (745)
T KOG0301|consen 251 ------CVQVIT-------LPTTSIWSAKVLLNGDIV-VGGSDGRVRVF 285 (745)
T ss_pred ------eEEEEe-------cCccceEEEEEeeCCCEE-EeccCceEEEE
Confidence 111111 22 368999999888765 68889999998
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-24 Score=232.63 Aligned_cols=197 Identities=18% Similarity=0.230 Sum_probs=157.2
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHh-hccCCCCcccc
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~i-L~~l~HpNIV~ 239 (1678)
.++.+-+..||.|+||+|++-.++ +.|+..|||.|+.... ..+.++++ .|... ++.-+.||||+
T Consensus 63 ~~~Lqdlg~iG~G~fG~V~KM~hk------~sg~~mAVKrIr~~n~-~keq~rll--------~e~d~~mks~~cp~IVk 127 (361)
T KOG1006|consen 63 SDNLQDLGEIGNGAFGTVNKMLHK------PSGKLMAVKRIRSNNI-EKEQKRLL--------MEHDTVMKSSNCPNIVK 127 (361)
T ss_pred cchHHHHHHhcCCcchhhhhhhcC------ccCcEEEEEEeeeccc-hHHHHHHH--------HHHHHHHhhcCCcHHHH
Confidence 456777899999999999998865 7899999999987533 34455555 67765 44557899999
Q ss_pred eeeEEEeCCeEEEeccCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEecCCCce
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQF---SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g~L~~~l~~---~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl~~~g~~ 315 (1678)
+||+...++..+|.||+|+-+|..+.++ -.+..++|..+-.+....+.||.||-. ..|||||+||+|||++..|
T Consensus 128 fyGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G-- 205 (361)
T KOG1006|consen 128 FYGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG-- 205 (361)
T ss_pred HhhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--
Confidence 9999999999999999999877666543 345678999999999999999999998 6999999999999999999
Q ss_pred eEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccc--cccccccccccccCccchhhhHhhhccccCC
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1678)
Q Consensus 316 ~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~--~~~y~~~~d~W~~G~isnfeyL~~ln~~aGR 393 (1678)
.+||||||++...... ...+... |-..|||||.+. +..|+-.+|+|+.| ++..+...|+
T Consensus 206 ~vKLCDFGIcGqLv~S----iAkT~da--------GCrpYmAPERi~p~~~gyDiRSDvWSLG-------ITL~EvAtG~ 266 (361)
T KOG1006|consen 206 DVKLCDFGICGQLVDS----IAKTVDA--------GCRPYMAPERIDPSDKGYDIRSDVWSLG-------ITLYEVATGN 266 (361)
T ss_pred CEeeecccchHhHHHH----HHhhhcc--------CCccccChhccCCccCCcchhhhhhhhc-------ceEeeeecCC
Confidence 8999999999865421 1122222 234799999775 44689999999999 6666666775
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-23 Score=241.39 Aligned_cols=204 Identities=17% Similarity=0.192 Sum_probs=171.1
Q ss_pred CCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCC------C
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH------P 235 (1678)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~H------p 235 (1678)
.+|.+....|+|-|++|..|.+. ..+..||||+|..+.... +.- ++|++||++|+. -
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~------~r~~~vAiKIIRnNE~M~---KtG--------l~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQ------ARGQEVAIKIIRNNEVMH---KTG--------LKELEILKKLNDADPEDKF 494 (752)
T ss_pred ceeEEEeccccceeeeeeecccc------CCCCeeEEEEeecchHHh---hhh--------hHHHHHHHHhhccCchhhh
Confidence 38999999999999999999965 456799999997653222 222 389999999963 4
Q ss_pred cccceeeEEEeCCeEEEeccCCCCCHHHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTPYTLENILQF-SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~g~L~~~l~~-~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
|+++|+-.|...+++|||+|-+.-+|.++|+. ..+..+....++.|++|+..||..|-..||+|.||||+|||+++..
T Consensus 495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k- 573 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESK- 573 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCc-
Confidence 89999999999999999999998899999985 3445688899999999999999999999999999999999999876
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhccccCCC
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~aGRs 394 (1678)
..+||||||.|.+... ...++ +-.+.+|+|||++.+.+|+...|.|+.||-. ||..++--+|.|++
T Consensus 574 ~iLKLCDfGSA~~~~e-----neitP--------YLVSRFYRaPEIiLG~~yd~~iD~WSvgctL-YElYtGkIlFpG~T 639 (752)
T KOG0670|consen 574 NILKLCDFGSASFASE-----NEITP--------YLVSRFYRAPEIILGLPYDYPIDTWSVGCTL-YELYTGKILFPGRT 639 (752)
T ss_pred ceeeeccCcccccccc-----ccccH--------HHHHHhccCcceeecCcccCCccceeeceee-EEeeccceecCCCC
Confidence 4899999999986542 11222 2245689999999999999999999999876 78778888888887
Q ss_pred CCC
Q 000316 395 WGD 397 (1678)
Q Consensus 395 ~~d 397 (1678)
-|+
T Consensus 640 NN~ 642 (752)
T KOG0670|consen 640 NNQ 642 (752)
T ss_pred cHH
Confidence 665
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-22 Score=235.38 Aligned_cols=194 Identities=16% Similarity=0.153 Sum_probs=151.8
Q ss_pred eeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
|++.+.||+|+||.||+|.... ...++..+|||.+...........++. +|+++++.++||||++++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~~ 69 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKS---EDGSFQKVAVKMLKADIFSSSDIEEFL--------REAACMKEFDHPNVIKLIGV 69 (273)
T ss_pred CcchhcccCCCCCCEEeeEeec---cCCCceEEEEEEeccccCChHHHHHHH--------HHHHHHhcCCCCCcceEEEE
Confidence 6778899999999999998642 224578999999976544444444554 89999999999999999998
Q ss_pred EEeCC------eEEEeccCCC-CCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCC
Q 000316 244 LKTSG------LITSVIPKTP-YTLENILQFSP----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 244 ~~~~~------~~~lVmEy~~-g~L~~~l~~~~----~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~ 312 (1678)
+.... ..++++||+. |+|.+++.... ...++...++.++.|++.||+|||++||+||||||+||+++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~ 149 (273)
T cd05074 70 SLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN 149 (273)
T ss_pred EccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC
Confidence 86542 3478899998 59988875321 2247888999999999999999999999999999999999998
Q ss_pred CceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 313 g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+ .+||+|||+++......... . .....+++.|++||.+.+..++.++|+|+.|++.
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~------~---~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il 205 (273)
T cd05074 150 M--TVCVADFGLSKKIYSGDYYR------Q---GCASKLPVKWLALESLADNVYTTHSDVWAFGVTM 205 (273)
T ss_pred C--CEEECcccccccccCCccee------c---CCCccCchhhcCHhHHhcCccchhhhhHHHHHHH
Confidence 8 89999999998543211000 0 0011245679999999988999999999999554
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG1539 consensus WD repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-20 Score=226.08 Aligned_cols=349 Identities=19% Similarity=0.220 Sum_probs=250.4
Q ss_pred eEe-ecCCCCCCCCCeEEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC
Q 000316 1286 FWF-PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI 1363 (1678)
Q Consensus 1286 V~~-fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg 1363 (1678)
|.+ +.|..+++ - ++.||.+|.+++||++ ++.+.+++++.+.|+++.=+|-=..++.|.. ||+|.++++..+
T Consensus 162 Ital~HP~TYLN--K-IvvGs~~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~----~G~ViifNlK~d 234 (910)
T KOG1539|consen 162 ITALLHPSTYLN--K-IVVGSSQGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLE----NGTVIIFNLKFD 234 (910)
T ss_pred eeeEecchhhee--e-EEEeecCCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEecc----CceEEEEEcccC
Confidence 666 77777762 2 8899999999999999 8899999999999999999998889999998 899999999999
Q ss_pred eEEEEEecCCccEEEEeecCCCCcE-EeC--CCcEEEEECCCCceeEEec-ccCcc-ccc----------cCCCCCCcc-
Q 000316 1364 NCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFA-EQSMD-SLH----------GGSPSSSIS- 1427 (1678)
Q Consensus 1364 ~~l~~l~gH~~~V~sV~fs~~~~~l-aS~--DgtVrIWD~~tg~~~~~l~-~~~~~-~~~----------~~s~s~~~~- 1427 (1678)
+.+.+++.-.+.|++++|..||.-+ +++ .|.+.+||++..+.+.... .|... ... ...++.+..
T Consensus 235 kil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~ 314 (910)
T KOG1539|consen 235 KILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKV 314 (910)
T ss_pred cEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeE
Confidence 9999998445999999998888776 555 6899999999887766555 33111 111 111111111
Q ss_pred -cccccc--cccc-ccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCC-------------------
Q 000316 1428 -KINTDQ--VGML-NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQ------------------- 1484 (1678)
Q Consensus 1428 -~~~~~~--~~~~-~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~t------------------- 1484 (1678)
+....+ ...+ ...+|+.+..++.|.+. +|..+.+++.|++.+.+++..
T Consensus 315 ~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~---------~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~ 385 (910)
T KOG1539|consen 315 WVFDSGDGVPRLLRSRGGHSAPPSCIRFYGS---------QGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKV 385 (910)
T ss_pred EEeeCCCCcchheeeccCCCCCchheeeecc---------CcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccc
Confidence 111011 1111 12345555555555433 466677777777766665432
Q ss_pred ----------------------------------------------Cee-eEEeeCCCCcccCCCcceEEEeeCCCcccc
Q 000316 1485 ----------------------------------------------GQK-LHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1678)
Q Consensus 1485 ----------------------------------------------g~~-l~~l~~~~~~v~~~~~V~sva~~~~~~~s~ 1517 (1678)
... -+.++..... .....+.++|.
T Consensus 386 ~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~-~~~~~~~av~v-------- 456 (910)
T KOG1539|consen 386 NVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFK-KDDINATAVCV-------- 456 (910)
T ss_pred cccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCcccc-ccCcceEEEEE--------
Confidence 110 0111100000 01122333443
Q ss_pred CcccCCCCEEEEEecCCeEEEEeCCCCcEEEEE---eccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCC-------
Q 000316 1518 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW---RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW------- 1586 (1678)
Q Consensus 1518 dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l---~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~------- 1586 (1678)
++.|++...|++.|+|-+|++.+|-...++ ..|+++|++|+ ..-++.++|++.||.++.||..+..
T Consensus 457 ---s~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l 533 (910)
T KOG1539|consen 457 ---SFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRL 533 (910)
T ss_pred ---eccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeecc
Confidence 356789999999999999999999888888 58999999999 7677899999999999999976532
Q ss_pred --------------------------------CCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCCCCCC
Q 000316 1587 --------------------------------PSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDG 1631 (1678)
Q Consensus 1587 --------------------------------~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~~~~g 1631 (1678)
.+.+..+.||++.|+ +|||||++|++++.|+ |++||+....
T Consensus 534 ~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~---- 609 (910)
T KOG1539|consen 534 GSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGT---- 609 (910)
T ss_pred CCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcc----
Confidence 122346778999999 4999999999999999 9999985221
Q ss_pred cceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCC-CcEEEc
Q 000316 1632 QHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTED-GYLRLC 1677 (1678)
Q Consensus 1632 ~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~D-G~IrIw 1677 (1678)
+.... .-..+.+++.|+|+|.+|||...| .-|.+|
T Consensus 610 --------lID~~---~vd~~~~sls~SPngD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 610 --------LIDGL---LVDSPCTSLSFSPNGDFLATVHVDQNGIYLW 645 (910)
T ss_pred --------eeeeE---ecCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence 11111 245688999999999999999998 668888
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.6e-22 Score=234.52 Aligned_cols=184 Identities=16% Similarity=0.117 Sum_probs=144.0
Q ss_pred eeeeeeCcEEEEEEEecCCCCc----cccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeE
Q 000316 168 AFIGICSYSIFEELASNFLSGC----LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~----~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
+.||+|+||.||+|.+...... ......+++|.+...... ...+. +|+.+|+.++||||++++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~~~ 69 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFF--------ETASLMSQLSHKHLVKLYGV 69 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHH--------HHHHHHHcCCCcchhheeeE
Confidence 4799999999999997521100 112245778876543211 33444 89999999999999999999
Q ss_pred EEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc-----eeE
Q 000316 244 LKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----SWL 317 (1678)
Q Consensus 244 ~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~-----~~l 317 (1678)
+.. ...++||||++ |+|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++. ..+
T Consensus 70 ~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 70 CVR-DENIMVEEYVKFGPLDVFLHRE-KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred Eec-CCcEEEEEcCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeE
Confidence 988 77899999999 5999999843 226889999999999999999999999999999999999987652 269
Q ss_pred EEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccc--cccccccccccCccc
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM--DWHSQFNRWWRGELS 379 (1678)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~y~~~~d~W~~G~is 379 (1678)
||+|||+++..... ....++..|+|||.+.+. .++.++|+|+.|.+.
T Consensus 148 kl~Dfg~a~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~ 196 (259)
T cd05037 148 KLSDPGIPITVLSR---------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTL 196 (259)
T ss_pred EeCCCCcccccccc---------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHH
Confidence 99999999864320 011255679999998876 788999999999553
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=212.00 Aligned_cols=257 Identities=16% Similarity=0.250 Sum_probs=196.4
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCCC--c-eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKA--S-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~~--~-~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~ 1364 (1678)
+|||... .+++.||+|++||+|+++. . .-+....|.++|.+++|+.||..+++|+. |+.+++||+.+++
T Consensus 34 ~FSP~~~----~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~----Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 34 AFSPQAD----NLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGC----DKQAKLWDLASGQ 105 (347)
T ss_pred EeccccC----ceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeecc----CCceEEEEccCCC
Confidence 4888222 3488999999999999883 3 23556679999999999999999999998 9999999999994
Q ss_pred EEEEEecCCccEEEEeecCCCC--cE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccC
Q 000316 1365 CVSGYYGHEEVVNDICVLSSSG--RI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440 (1678)
Q Consensus 1365 ~l~~l~gH~~~V~sV~fs~~~~--~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~ 1440 (1678)
..++..|.++|.+++|.+... .| +|.|+|||.||++...++.++.-+..
T Consensus 106 -~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeR-------------------------- 158 (347)
T KOG0647|consen 106 -VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPER-------------------------- 158 (347)
T ss_pred -eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccce--------------------------
Confidence 556778999999999988766 34 67799999999998888877764321
Q ss_pred CCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcc
Q 000316 1441 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGA 1520 (1678)
Q Consensus 1441 ~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~ 1520 (1678)
+.++++- ..+++++..+..|.+|+++.+... ++-+.... .-.++||+...
T Consensus 159 ---------------vYa~Dv~--~pm~vVata~r~i~vynL~n~~te--~k~~~SpL--k~Q~R~va~f~--------- 208 (347)
T KOG0647|consen 159 ---------------VYAADVL--YPMAVVATAERHIAVYNLENPPTE--FKRIESPL--KWQTRCVACFQ--------- 208 (347)
T ss_pred ---------------eeehhcc--CceeEEEecCCcEEEEEcCCCcch--hhhhcCcc--cceeeEEEEEe---------
Confidence 2222221 347889999999999999765432 22222222 22378887652
Q ss_pred cCCCCEEEEEecCCeEEEEeCCCC--cEEEEEeccCC---------CeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCC
Q 000316 1521 VASPSWIAAGLSSGQCRLFDVRSG--NVIASWRAHDG---------YVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1521 ~p~g~~LasGs~Dg~I~lWD~~tg--~~i~~l~gH~~---------~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
+....|.|+-.|.+.+..+..+ +.-.+|+.|.. .|++|+ +|.-..|+|+|.||++..||-... .
T Consensus 209 --d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar--~ 284 (347)
T KOG0647|consen 209 --DKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDAR--T 284 (347)
T ss_pred --cCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhh--h
Confidence 3345699999999999999887 44456777763 467777 888889999999999999998765 5
Q ss_pred CCeEeecCCCCEEE--EEecCCEEEEE
Q 000316 1589 QPTVFKGHTNGISG--FSVWGQDVISI 1613 (1678)
Q Consensus 1589 ~~~~l~gH~~~V~a--fSpdg~~LaSg 1613 (1678)
.+.+.+.|..+|.+ |+.+|.++|-+
T Consensus 285 kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 285 KLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred hhhccCcCCCccceeEecCCCCEEEEE
Confidence 56677889999984 88888887765
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.5e-21 Score=211.32 Aligned_cols=268 Identities=15% Similarity=0.218 Sum_probs=200.2
Q ss_pred cccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCC-CeEE-EEEecCCccEEEEeecCCCCcE--EeCCCcEEEEEC
Q 000316 1325 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-INCV-SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNS 1400 (1678)
Q Consensus 1325 gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~t-g~~l-~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~ 1400 (1678)
...++|.+++|||....++++|. ||++||+|++.. |... +....|.++|.+++|+.++..+ ++||+.+++||+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~S---WD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL 101 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGS---WDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDL 101 (347)
T ss_pred CcccchheeEeccccCceEEecc---cCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEc
Confidence 46789999999996666665553 799999999976 4433 3345799999999999999887 677999999999
Q ss_pred CCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEE
Q 000316 1401 QTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFI 1480 (1678)
Q Consensus 1401 ~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlW 1480 (1678)
.+++.. .+.. |.++|..+.|-+. .....|++||.|+|||+|
T Consensus 102 ~S~Q~~-~v~~------------------------------Hd~pvkt~~wv~~--------~~~~cl~TGSWDKTlKfW 142 (347)
T KOG0647|consen 102 ASGQVS-QVAA------------------------------HDAPVKTCHWVPG--------MNYQCLVTGSWDKTLKFW 142 (347)
T ss_pred cCCCee-eeee------------------------------cccceeEEEEecC--------CCcceeEecccccceeec
Confidence 999653 3332 3445555555443 113478999999999999
Q ss_pred ECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEE-EEEe-ccCCCeE
Q 000316 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI-ASWR-AHDGYVT 1558 (1678)
Q Consensus 1481 Dl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i-~~l~-gH~~~V~ 1558 (1678)
|.|+..++.++.- +..|.+...- -.+++.+..+..|.+|+++++... +..+ .-+..++
T Consensus 143 D~R~~~pv~t~~L-------PeRvYa~Dv~-------------~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R 202 (347)
T KOG0647|consen 143 DTRSSNPVATLQL-------PERVYAADVL-------------YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTR 202 (347)
T ss_pred ccCCCCeeeeeec-------cceeeehhcc-------------CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceee
Confidence 9999999888763 3334443321 146888899999999999876322 2221 1234578
Q ss_pred EEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCC-----C-EE-----EEEecCCEEEEEeCCC-eEEEecCC
Q 000316 1559 KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN-----G-IS-----GFSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1559 sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~-----~-V~-----afSpdg~~LaSgs~D~-I~vwdl~~ 1625 (1678)
+|+ ..|....+-||-+|.+.|..+..+.+..-++++.|.. . |. +|.|.-..|+|++.|| ..+||-..
T Consensus 203 ~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkda 282 (347)
T KOG0647|consen 203 CVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDA 282 (347)
T ss_pred EEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchh
Confidence 888 7788777999999999999999876666778999974 2 44 4999999999999999 99999541
Q ss_pred CCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEE
Q 000316 1626 SADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG 1668 (1678)
Q Consensus 1626 ~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatg 1668 (1678)
.+++... ..|..+|++++|+.+|.+||-+
T Consensus 283 -----------r~kLk~s---~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 283 -----------RTKLKTS---ETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred -----------hhhhhcc---CcCCCccceeEecCCCCEEEEE
Confidence 1233221 2478999999999999999866
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.4e-23 Score=245.84 Aligned_cols=202 Identities=17% Similarity=0.168 Sum_probs=167.9
Q ss_pred cCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccc
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~ 239 (1678)
-.++.++.++||+|+||+|++|..+-.. .+...||||.++.+.... ...+|+ +|+.+|.+|+|||+|+
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~ps---gk~V~VAVKclr~d~l~~-~mddfl--------rEas~M~~L~H~hliR 175 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPS---GKHVNVAVKCLRDDSLNA-IMDDFL--------REASHMLKLQHPHLIR 175 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCC---CcEEeEEEEeccCCccch-hHHHHH--------HHHHHHHhccCcceeE
Confidence 3457788999999999999999865422 356789999998765543 455676 9999999999999999
Q ss_pred eeeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
|||+..+ ..+.||||+++ |+|.+.|+......|.......|+.||+.|+.||.++++|||||...|||+.... .||
T Consensus 176 LyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr--tVK 252 (1039)
T KOG0199|consen 176 LYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR--TVK 252 (1039)
T ss_pred Eeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc--eee
Confidence 9999988 77899999999 7999999976777889999999999999999999999999999999999999877 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhcccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~~a 391 (1678)
||||||.|..............+ .-...|.|||-++...++.++|+|..| +++.++|+
T Consensus 253 I~DFGLmRaLg~ned~Yvm~p~r--------kvPfAWCaPEsLrh~kFShaSDvWmyG-------VTiWEMFt 310 (1039)
T KOG0199|consen 253 ICDFGLMRALGENEDMYVMAPQR--------KVPFAWCAPESLRHRKFSHASDVWMYG-------VTIWEMFT 310 (1039)
T ss_pred eecccceeccCCCCcceEecCCC--------cCcccccCHhHhccccccccchhhhhh-------hhHHhhhc
Confidence 99999999876544333211111 124468999999999999999999999 55555554
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=225.82 Aligned_cols=259 Identities=18% Similarity=0.231 Sum_probs=201.4
Q ss_pred eecCCCCCCCCCeEEEEeCCCCEEEEeCCC-ceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEE
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~~-~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l 1366 (1678)
+|||.-.+ ++.+|+| ..+.|++..+ ...+++.--.+.|.+++|-.||+.+++|.. .|.|+|+|..+...+
T Consensus 33 ~fsp~~P~---d~aVt~S--~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~----sG~V~vfD~k~r~iL 103 (487)
T KOG0310|consen 33 CFSPKHPY---DFAVTSS--VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDE----SGHVKVFDMKSRVIL 103 (487)
T ss_pred ecCCCCCC---ceEEecc--cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCC----cCcEEEeccccHHHH
Confidence 48887665 4344444 5688999773 456667777899999999999999999887 799999998776778
Q ss_pred EEEecCCccEEEEeecCCCCcE---EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCC
Q 000316 1367 SGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1443 (1678)
Q Consensus 1367 ~~l~gH~~~V~sV~fs~~~~~l---aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s 1443 (1678)
..+.+|+.+|..+.|+|.+..+ ++.|+.+++||+.++.....+.+|.
T Consensus 104 R~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~ht------------------------------ 153 (487)
T KOG0310|consen 104 RQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHT------------------------------ 153 (487)
T ss_pred HHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCc------------------------------
Confidence 8899999999999999987776 4448999999999887533454432
Q ss_pred CCeEEeeecCCceeEeEeecC-CCEEEEEECCCcEEEEECCCC-eeeEEeeCCCCcccCCCcceEEEeeCCCccccCccc
Q 000316 1444 SGILSTAFDGNLYTCLHHIEC-VERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV 1521 (1678)
Q Consensus 1444 ~~v~sv~f~~~~vt~va~sp~-g~~Lasgs~DgtVrlWDl~tg-~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~ 1521 (1678)
+.|.|.+++|. +..+++|+.||+||+||+++. ..+.++. |...|..|++-
T Consensus 154 ----------DYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln-------hg~pVe~vl~l----------- 205 (487)
T KOG0310|consen 154 ----------DYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN-------HGCPVESVLAL----------- 205 (487)
T ss_pred ----------ceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec-------CCCceeeEEEc-----------
Confidence 34556666654 457899999999999999986 5555554 45568888875
Q ss_pred CCCCEEEEEecCCeEEEEeCCCCc-EEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCC
Q 000316 1522 ASPSWIAAGLSSGQCRLFDVRSGN-VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG 1599 (1678)
Q Consensus 1522 p~g~~LasGs~Dg~I~lWD~~tg~-~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~ 1599 (1678)
|+|..+|+++. ..|++||+-+|. .+.....|...|+|+. ..+++.|+|||.|+.|++||+.+- +.+..++ ..++
T Consensus 206 psgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~--Kvv~s~~-~~~p 281 (487)
T KOG0310|consen 206 PSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY--KVVHSWK-YPGP 281 (487)
T ss_pred CCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce--EEEEeee-cccc
Confidence 45568888775 589999999765 4455555999999999 778999999999999999997664 3334443 3556
Q ss_pred EE--EEEecCCEEEEEeCCC
Q 000316 1600 IS--GFSVWGQDVISISNNK 1617 (1678)
Q Consensus 1600 V~--afSpdg~~LaSgs~D~ 1617 (1678)
|. +++|+++.++.|..||
T Consensus 282 vLsiavs~dd~t~viGmsnG 301 (487)
T KOG0310|consen 282 VLSIAVSPDDQTVVIGMSNG 301 (487)
T ss_pred eeeEEecCCCceEEEecccc
Confidence 66 5999999999999999
|
|
| >KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-21 Score=228.37 Aligned_cols=334 Identities=16% Similarity=0.199 Sum_probs=231.3
Q ss_pred cccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC--C--------------------ceeE----------
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--A--------------------SILS---------- 1321 (1678)
Q Consensus 1276 ~~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~--~--------------------~~l~---------- 1321 (1678)
...+.||+|||.+ |+.-|. +..+|||+|.|..||||.+. + ..+.
T Consensus 184 v~el~GH~DWIrsl~f~~~~~--~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~ea 261 (764)
T KOG1063|consen 184 VAELEGHTDWIRSLAFARLGG--DDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEA 261 (764)
T ss_pred EEEeeccchhhhhhhhhccCC--CcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhh
Confidence 4578999999987 443333 24569999999999999965 2 1121
Q ss_pred EeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCC--e-----EEEEEecCCccEEEEeecCCCCcE-EeC-C
Q 000316 1322 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--N-----CVSGYYGHEEVVNDICVLSSSGRI-ASC-D 1392 (1678)
Q Consensus 1322 tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg--~-----~l~~l~gH~~~V~sV~fs~~~~~l-aS~-D 1392 (1678)
.+.||.+.|.++.|+|.+..|+|+|+ |+++.+|.-.+. - ++....|....-+++.|++++..+ +.+ -
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASa----DksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~ 337 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASA----DKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRT 337 (764)
T ss_pred hhcCcccceEEEEEccchhhheeccc----CcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEeccc
Confidence 23499999999999999999999998 999999986543 2 223334455678899999998777 433 8
Q ss_pred CcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEE
Q 000316 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI 1472 (1678)
Q Consensus 1393 gtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs 1472 (1678)
|..++|....... .+.. ....+|...|..+ ++.|.|.++++++
T Consensus 338 Gg~hlWkt~d~~~-w~~~--------------------------~~iSGH~~~V~dv----------~W~psGeflLsvs 380 (764)
T KOG1063|consen 338 GGFHLWKTKDKTF-WTQE--------------------------PVISGHVDGVKDV----------DWDPSGEFLLSVS 380 (764)
T ss_pred CcEEEEeccCccc-eeec--------------------------cccccccccceee----------eecCCCCEEEEec
Confidence 9999998332211 1111 0112344444444 4555699999999
Q ss_pred CCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCC----------
Q 000316 1473 GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR---------- 1542 (1678)
Q Consensus 1473 ~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~---------- 1542 (1678)
.|.|-|++-.- |+... |..-..+.-|.-..+|+++.+. ...+++|.+...+|+|+.-
T Consensus 381 ~DQTTRlFa~w-g~q~~-wHEiaRPQiHGyDl~c~~~vn~-----------~~~FVSgAdEKVlRvF~aPk~fv~~l~~i 447 (764)
T KOG1063|consen 381 LDQTTRLFARW-GRQQE-WHEIARPQIHGYDLTCLSFVNE-----------DLQFVSGADEKVLRVFEAPKSFVKSLMAI 447 (764)
T ss_pred cccceeeeccc-ccccc-eeeecccccccccceeeehccC-----------CceeeecccceeeeeecCcHHHHHHHHHH
Confidence 99999998654 22221 2111111124444566665431 1245555555555555431
Q ss_pred ---------------------------------CCc---------------------------------EEEEEeccCCC
Q 000316 1543 ---------------------------------SGN---------------------------------VIASWRAHDGY 1556 (1678)
Q Consensus 1543 ---------------------------------tg~---------------------------------~i~~l~gH~~~ 1556 (1678)
+|. .+.++-||...
T Consensus 448 ~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyE 527 (764)
T KOG1063|consen 448 CGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYE 527 (764)
T ss_pred hCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchhhHHhccCcee
Confidence 111 11223478889
Q ss_pred eEEEE-cCCCCEEEEEeCCC-----cEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCCEEEEEeCCC-eEEEecCCCC
Q 000316 1557 VTKLA-APEDHLLVSSSLDK-----TLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSA 1627 (1678)
Q Consensus 1557 V~sva-spdg~~LaSgS~Dg-----tI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~vwdl~~~~ 1627 (1678)
|.+++ +|+++++||++... -|++|+..+. .+...+.+|+-.|+ +|||||++|+++|.|+ +.+|......
T Consensus 528 v~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W--~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~ 605 (764)
T KOG1063|consen 528 VYALAISPTGNLIASACKSSLKEHAVIRLWNTANW--LQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDI 605 (764)
T ss_pred EEEEEecCCCCEEeehhhhCCccceEEEEEeccch--hhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeeccc
Confidence 99999 99999999998654 4899998876 55668999999999 6999999999999999 9999975211
Q ss_pred CCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
....+ +. ....|...|.+++|+||++.|||||.|.+|++|
T Consensus 606 --~~e~~------fa--~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW 645 (764)
T KOG1063|consen 606 --KDEFR------FA--CLKAHTRIIWDCSWSPDEKYFATASRDKKVKVW 645 (764)
T ss_pred --chhhh------hc--cccccceEEEEcccCcccceeEEecCCceEEEE
Confidence 11111 11 123588999999999999999999999999999
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.8e-22 Score=234.49 Aligned_cols=192 Identities=16% Similarity=0.118 Sum_probs=153.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChH--HHHHHHHhcCCCchhHHHhhccC-CCCcccc
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~--~~~~~l~~~~~~~~~Ei~iL~~l-~HpNIV~ 239 (1678)
+|++.+.||+|+||.||++++.. ...++..+|+|.+++...... ....+. +|+.+++.+ +||||++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~---~~~~~~~~avk~~~~~~~~~~~~~~~~~~--------~E~~~l~~~~~~~~i~~ 69 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVG---GHDAGKLYAMKVLKKATIVQKAKTAEHTR--------TERQVLEAVRRCPFLVT 69 (288)
T ss_pred CceEEEEeccCCCceEEEEEEec---cccCCcEEEEEEEehHHHHhhhhHHHHHH--------HHHHHHHhccCCcchhh
Confidence 48899999999999999998532 234678899999875322211 112222 899999999 5999999
Q ss_pred eeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEE
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lK 318 (1678)
+++.+..+...|+||||+++ +|.+++. ....+++..++.++.|++.||.|||++|++||||||+||+++.++ .+|
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~--~~~ 145 (288)
T cd05583 70 LHYAFQTDTKLHLILDYVNGGELFTHLY--QREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG--HVV 145 (288)
T ss_pred hheeeecCCEEEEEEecCCCCcHHHHHh--hcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEE
Confidence 99999999999999999985 9999987 345689999999999999999999999999999999999999998 899
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCccccccccccccc--ccccccccccCccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELS 379 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~--y~~~~d~W~~G~is 379 (1678)
|+|||+++........ ......++..|+|||.+.+.. .+..+|+|+.|.+.
T Consensus 146 l~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il 198 (288)
T cd05583 146 LTDFGLSKEFLAEEEE----------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLT 198 (288)
T ss_pred EEECcccccccccccc----------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHH
Confidence 9999998754321100 011123678899999887654 67899999999553
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-22 Score=234.11 Aligned_cols=194 Identities=18% Similarity=0.166 Sum_probs=150.2
Q ss_pred eeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeC
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
+.||+|+||.||+|+..-.......+..+|+|.+... .......++. +|+.+++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 71 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFL--------KEAHLMSNFNHPNIVKLLGVCLLN 71 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHH--------HHHHHHHhcCCCCeeeEeeeecCC
Confidence 3699999999999986432211234578999998653 2222334444 899999999999999999999999
Q ss_pred CeEEEeccCCC-CCHHHHHhhC-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCC---ceeEE
Q 000316 248 GLITSVIPKTP-YTLENILQFS-----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC---WSWLY 318 (1678)
Q Consensus 248 ~~~~lVmEy~~-g~L~~~l~~~-----~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g---~~~lK 318 (1678)
+..++||||++ ++|.+++... ....++...+..++.|++.||.|||+++++||||||+||+++.++ ...+|
T Consensus 72 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~ 151 (269)
T cd05044 72 EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVK 151 (269)
T ss_pred CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceE
Confidence 99999999998 4999999742 223478889999999999999999999999999999999998754 12699
Q ss_pred EEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
|+|||+++........... ....++..|+|||.+.+..++.+.|+|+.|.|.
T Consensus 152 l~dfg~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 203 (269)
T cd05044 152 IGDFGLARDIYKSDYYRKE---------GEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLM 203 (269)
T ss_pred ECCcccccccccccccccC---------cccCCCccccCHHHHccCCcccchhHHHHHHHH
Confidence 9999999854321111000 011245679999999999999999999999664
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-21 Score=229.44 Aligned_cols=258 Identities=16% Similarity=0.207 Sum_probs=210.9
Q ss_pred EEEEeCCCCEEEEeCC-CceeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEec-CCccEEE
Q 000316 1301 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG-HEEVVND 1378 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~-~~~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~g-H~~~V~s 1378 (1678)
+|.|.+ ..|.+|+.. +........+.+.|++|.|+++|++|+.|.. +|+|.|||..+.+.+.++.+ |...|-+
T Consensus 191 laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~----~g~v~iwD~~~~k~~~~~~~~h~~rvg~ 265 (484)
T KOG0305|consen 191 LAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTS----DGTVQIWDVKEQKKTRTLRGSHASRVGS 265 (484)
T ss_pred EEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeec----CCeEEEEehhhccccccccCCcCceeEE
Confidence 666654 569999988 4444444445899999999999999999998 89999999999999999998 9999999
Q ss_pred EeecCCCCcE--EeCCCcEEEEECCCCceeEE-ecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCc
Q 000316 1379 ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSV-FAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455 (1678)
Q Consensus 1379 V~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~-l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~ 1455 (1678)
++|. +..+ ++.|+.|.++|++..+.... +.+| ...
T Consensus 266 laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H------------------------------~qe---------- 303 (484)
T KOG0305|consen 266 LAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGH------------------------------RQE---------- 303 (484)
T ss_pred Eecc--CceEEEecCCCcEEEEEEecchhhhhhhhcc------------------------------cce----------
Confidence 9996 3333 66799999999998765433 3222 223
Q ss_pred eeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEe--cC
Q 000316 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL--SS 1533 (1678)
Q Consensus 1456 vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs--~D 1533 (1678)
|..+.+++++.++|+|+.|+.+.|||..+.+++..+..| ...|.+++|||... ++||+|+ .|
T Consensus 304 VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H------~aAVKA~awcP~q~----------~lLAsGGGs~D 367 (484)
T KOG0305|consen 304 VCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEH------TAAVKALAWCPWQS----------GLLATGGGSAD 367 (484)
T ss_pred eeeeEECCCCCeeccCCCccceEeccCCCccccEEEecc------ceeeeEeeeCCCcc----------CceEEcCCCcc
Confidence 555666678999999999999999999888888888754 55699999998543 6899864 69
Q ss_pred CeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEE--EeCCCcEEEEEcCCCCCCCCeEeecCCCCEE--EEEecCC
Q 000316 1534 GQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVS--SSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQ 1608 (1678)
Q Consensus 1534 g~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaS--gS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~ 1608 (1678)
++|++||+.+|+.+..+.. ...|.+|. ++..+-|++ |-.++.|.||+..+. ..+..+.||+..|. ++||||.
T Consensus 368 ~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~--~~~~~l~gH~~RVl~la~SPdg~ 444 (484)
T KOG0305|consen 368 RCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSM--KLVAELLGHTSRVLYLALSPDGE 444 (484)
T ss_pred cEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCEEEEecCCCCCcEEEEecccc--ceeeeecCCcceeEEEEECCCCC
Confidence 9999999999999988874 46788898 777765555 335778999999886 66789999999999 5999999
Q ss_pred EEEEEeCCC-eEEEecC
Q 000316 1609 DVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1609 ~LaSgs~D~-I~vwdl~ 1624 (1678)
.+++|+.|. +++|++-
T Consensus 445 ~i~t~a~DETlrfw~~f 461 (484)
T KOG0305|consen 445 TIVTGAADETLRFWNLF 461 (484)
T ss_pred EEEEecccCcEEecccc
Confidence 999999998 9999985
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=203.58 Aligned_cols=268 Identities=14% Similarity=0.108 Sum_probs=211.9
Q ss_pred ccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCCC-cee--EEeccccccEEEEEEecCC-CEEEEEecCCCCC
Q 000316 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-SIL--SSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFK 1352 (1678)
Q Consensus 1279 l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~~-~~l--~tl~gH~~~V~svafspdg-~~LaSgS~d~~~D 1352 (1678)
+.+|...|.+ ++.+|.. |++||.|+++++|++++ ..+ ...+||++.|-.++|+|.. ..+++++. |
T Consensus 16 ~~~~~~~v~Sv~wn~~g~~-----lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~----d 86 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGTK-----LASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASG----D 86 (313)
T ss_pred hhhhhhcceEEEEcccCce-----eeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecC----C
Confidence 3445555554 7777876 99999999999999983 333 3567999999999999864 68888887 8
Q ss_pred CeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccc
Q 000316 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1678)
Q Consensus 1353 gtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~ 1430 (1678)
++||+||..+++|......-.+.++ +.|+|+++++ +..|..|.+.|.++-+.+...+..
T Consensus 87 k~ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~------------------ 147 (313)
T KOG1407|consen 87 KTIRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFK------------------ 147 (313)
T ss_pred ceEEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhccc------------------
Confidence 9999999999999998876666655 6789999998 334999999999987766544321
Q ss_pred cccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEee
Q 000316 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1678)
Q Consensus 1431 ~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~ 1510 (1678)
..+..++| +.+++++...++.|+|.|......+++.+++.|. +...||.|+
T Consensus 148 -------------~e~ne~~w----------~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~------snCicI~f~ 198 (313)
T KOG1407|consen 148 -------------FEVNEISW----------NNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHP------SNCICIEFD 198 (313)
T ss_pred -------------ceeeeeee----------cCCCCEEEEecCCceEEEEeccccccccccccCC------cceEEEEEC
Confidence 12223333 3357788877888999999998889998888654 223344443
Q ss_pred CCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCC
Q 000316 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ 1589 (1678)
Q Consensus 1511 ~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~ 1589 (1678)
|+|+++|+|+.|..+.+||+...-+++.+..++-+|+.+. +.||++|||||.|..|-|=++.+| ..
T Consensus 199 -----------p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetG--d~ 265 (313)
T KOG1407|consen 199 -----------PDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETG--DR 265 (313)
T ss_pred -----------CCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccC--Ce
Confidence 5668999999999999999999999999999999999999 999999999999999999999999 56
Q ss_pred CeEeecCCCCEE--EEEecCCEEEEEeCCC
Q 000316 1590 PTVFKGHTNGIS--GFSVWGQDVISISNNK 1617 (1678)
Q Consensus 1590 ~~~l~gH~~~V~--afSpdg~~LaSgs~D~ 1617 (1678)
++.++. .++.. +|+|...+||-+++|+
T Consensus 266 ~~eI~~-~~~t~tVAWHPk~~LLAyA~ddk 294 (313)
T KOG1407|consen 266 VWEIPC-EGPTFTVAWHPKRPLLAYACDDK 294 (313)
T ss_pred EEEeec-cCCceeEEecCCCceeeEEecCC
Confidence 666654 33333 7999999999888765
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-22 Score=239.57 Aligned_cols=187 Identities=17% Similarity=0.150 Sum_probs=160.2
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
+.+...+||-|.||.||.+..+. -...||||.++.+ .-...+|+ .|..+|+.++|||+|+|++
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKk------yslTvAVKtLKED---tMeveEFL--------kEAAvMKeikHpNLVqLLG 330 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKK------YSLTVAVKTLKED---TMEVEEFL--------KEAAVMKEIKHPNLVQLLG 330 (1157)
T ss_pred heeeeeccCCCcccceeeeeeec------cceeeehhhhhhc---chhHHHHH--------HHHHHHHhhcCccHHHHhh
Confidence 45567899999999999999763 4567999999754 34456788 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
+|..+..+|||.|||. |+|.++|+...+..++.-...+++.||..|++||..++.|||||...|.|+.++. .+||+|
T Consensus 331 VCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh--iVKvAD 408 (1157)
T KOG4278|consen 331 VCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--IVKVAD 408 (1157)
T ss_pred hhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc--eEEeec
Confidence 9999999999999999 7999999987777788888899999999999999999999999999999999999 999999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCcc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~i 378 (1678)
|||+|.+.....+...+.. =..-|.|||-+.-..++.+.|+|.+|.+
T Consensus 409 FGLsRlMtgDTYTAHAGAK----------FPIKWTAPEsLAyNtFSiKSDVWAFGVL 455 (1157)
T KOG4278|consen 409 FGLSRLMTGDTYTAHAGAK----------FPIKWTAPESLAYNTFSIKSDVWAFGVL 455 (1157)
T ss_pred cchhhhhcCCceecccCcc----------CcccccCcccccccccccchhhHHHHHH
Confidence 9999987754433322211 1345889999988888999999999955
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.7e-22 Score=237.65 Aligned_cols=190 Identities=15% Similarity=0.180 Sum_probs=155.4
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceee
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~ 242 (1678)
..++.+.||+|.||.||+|.....+ .....-||||..+.+.. ....+.|+ .|.-+|+.++|||||+|+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~--kge~iaVAvKtCK~d~t-~d~tekfl--------qEa~iMrnfdHphIikLIG 458 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPE--KGERIAVAVKTCKTDCT-PDDTEKFL--------QEASIMRNFDHPHIIKLIG 458 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccc--cCcceeeeeehhccCCC-hhhHHHHH--------HHHHHHHhCCCcchhheee
Confidence 3455789999999999999965331 12345599999987533 34467777 8999999999999999999
Q ss_pred EEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEe
Q 000316 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 243 ~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~D 321 (1678)
++.+ ...+||||.++ |.|..+++. +...++......|++||+.||+|||+++.|||||...|||+.... -+||+|
T Consensus 459 v~~e-~P~WivmEL~~~GELr~yLq~-nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~--CVKLaD 534 (974)
T KOG4257|consen 459 VCVE-QPMWIVMELAPLGELREYLQQ-NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ--CVKLAD 534 (974)
T ss_pred eeec-cceeEEEecccchhHHHHHHh-ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc--eeeecc
Confidence 9975 56899999999 899999994 455688888899999999999999999999999999999999988 799999
Q ss_pred cCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCc
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGE 377 (1678)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~ 377 (1678)
||++|........... ... -..-|||||-+.-..++.++|+|.+|.
T Consensus 535 FGLSR~~ed~~yYkaS-~~k---------LPIKWmaPESINfRrFTtASDVWMFgV 580 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKAS-RGK---------LPIKWMAPESINFRRFTTASDVWMFGV 580 (974)
T ss_pred cchhhhccccchhhcc-ccc---------cceeecCccccchhcccchhhHHHHHH
Confidence 9999987644322111 111 234699999999999999999999994
|
|
| >KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1e-20 Score=218.57 Aligned_cols=280 Identities=18% Similarity=0.273 Sum_probs=211.2
Q ss_pred ccccCCCCceEe--ecCCCCCCCCCeEEEEeCCCCEEEEeCC-Ccee-----------------EEe-ccccccEEEEEE
Q 000316 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASIL-----------------SSI-RAHHGALRSVAV 1335 (1678)
Q Consensus 1277 ~~l~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-~~~l-----------------~tl-~gH~~~V~svaf 1335 (1678)
.....|.-.|.+ ++||+++ ..++|.|++|.-|++. |... +.- ++|...|.+++.
T Consensus 136 ~~~~~H~~s~~~vals~d~~~-----~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 136 RVIGKHQLSVTSVALSPDDKR-----VFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred eeeccccCcceEEEeeccccc-----eeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE
Confidence 334556666664 8999987 8999999999999976 3211 111 389999999999
Q ss_pred ecCCCEEEEEecCCCCCCeEEEEeCCCCeEEEEEecCCccEEEEeecCCCCcE--EeCCCcEEEEECCCCceeEEecccC
Q 000316 1336 GQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQS 1413 (1678)
Q Consensus 1336 spdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~~l~gH~~~V~sV~fs~~~~~l--aS~DgtVrIWD~~tg~~~~~l~~~~ 1413 (1678)
|+||++|++|+. |..|.|||..|.+.++.++||.+.|.+++|-.....+ +|.|++|++|+++.-..+.++-+|.
T Consensus 211 S~Dgkylatgg~----d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHq 286 (479)
T KOG0299|consen 211 SSDGKYLATGGR----DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQ 286 (479)
T ss_pred cCCCcEEEecCC----CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCc
Confidence 999999999997 8999999999999999999999999999997655555 6669999999998776666665543
Q ss_pred ccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEEEECCCcEEEEECCCCeeeEEeeC
Q 000316 1414 MDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1493 (1678)
Q Consensus 1414 ~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~ 1493 (1678)
. .|.++ ....-++.+-+|+.|.++++|++.. +....+.+
T Consensus 287 d------------------------------~v~~I----------daL~reR~vtVGgrDrT~rlwKi~e-esqlifrg 325 (479)
T KOG0299|consen 287 D------------------------------GVLGI----------DALSRERCVTVGGRDRTVRLWKIPE-ESQLIFRG 325 (479)
T ss_pred c------------------------------ceeee----------chhcccceEEeccccceeEEEeccc-cceeeeeC
Confidence 2 22222 2222355666777999999999953 33334554
Q ss_pred CCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCCCCcEEEEEe-cc-----------CCCeEEEE
Q 000316 1494 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AH-----------DGYVTKLA 1561 (1678)
Q Consensus 1494 ~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~tg~~i~~l~-gH-----------~~~V~sva 1561 (1678)
+ .+.+.|+||- +...+++||+||.|.+|++.+.+++.+.+ +| ..+|++|+
T Consensus 326 ~------~~sidcv~~I------------n~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla 387 (479)
T KOG0299|consen 326 G------EGSIDCVAFI------------NDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLA 387 (479)
T ss_pred C------CCCeeeEEEe------------cccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeE
Confidence 3 4457888884 34679999999999999999988887664 23 12899999
Q ss_pred -cCCCCEEEEEeCCCcEEEEEcCCCC--CCCCeEeecCCCCEE--EEEecCCEEEEE-eCCC-eEEEecCC
Q 000316 1562 -APEDHLLVSSSLDKTLRIWDLRRNW--PSQPTVFKGHTNGIS--GFSVWGQDVISI-SNNK-IGLSSLSK 1625 (1678)
Q Consensus 1562 -spdg~~LaSgS~DgtI~IWDl~~~~--~~~~~~l~gH~~~V~--afSpdg~~LaSg-s~D~-I~vwdl~~ 1625 (1678)
.|...++||||.+|.|++|-+..+. ...+..+. -.+-|+ +|+.+|+.+++| +... +.-|-...
T Consensus 388 ~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~~~k 457 (479)
T KOG0299|consen 388 VIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRWWCLK 457 (479)
T ss_pred ecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEecccccccceeeEee
Confidence 8899999999999999999999873 22333333 445666 489999977665 4444 77777643
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-21 Score=231.42 Aligned_cols=188 Identities=13% Similarity=0.156 Sum_probs=157.3
Q ss_pred CCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccce
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|+..+.||+|+||.||+|.+. .++..+++|.+..... ....+. +|+.+++.++|+||+++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 80 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDR------ATGKEVAIKKMRLRKQ---NKELII--------NEILIMKDCKHPNIVDY 80 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEc------cCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHCCCCCeeEE
Confidence 556999999999999999999964 3578899999875432 233344 89999999999999999
Q ss_pred eeEEEeCCeEEEeccCCC-CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEE
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~~~lVmEy~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL 319 (1678)
++++...+..|+|+||++ ++|.+++.... ..++...+..++.|++.||.|||++||+|+||||+||+++.++ .+||
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~--~~~l 157 (286)
T cd06614 81 YDSYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG--SVKL 157 (286)
T ss_pred EEEEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC--CEEE
Confidence 999999999999999999 59999998432 3789999999999999999999999999999999999999998 8999
Q ss_pred EecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
+|||++........ . .....++..|++||++.+..++.++|+|+.|.|.
T Consensus 158 ~d~~~~~~~~~~~~-----~------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil 206 (286)
T cd06614 158 ADFGFAAQLTKEKS-----K------RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMC 206 (286)
T ss_pred Cccchhhhhccchh-----h------hccccCCcccCCHhHhcCCCCCCccccHHHHHHH
Confidence 99999874332110 0 0112357789999999988999999999999654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=217.09 Aligned_cols=274 Identities=21% Similarity=0.278 Sum_probs=209.5
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCeEEE----E-------------E-ecCCccEEEEee
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS----G-------------Y-YGHEEVVNDICV 1381 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~~l~----~-------------l-~gH~~~V~sV~f 1381 (1678)
+..+..|.-+|.||+++||++++++++. |++|.-|++.+|+... . - ++|...|.+++.
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask----~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av 210 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASK----DGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV 210 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCC----CcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE
Confidence 5667889999999999999999999998 8999999998876320 0 1 379999999999
Q ss_pred cCCCCcEEeC--CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEe
Q 000316 1382 LSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCL 1459 (1678)
Q Consensus 1382 s~~~~~laS~--DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~v 1459 (1678)
++++.+++++ |..|.|||+++.+.++++.+|. +.|.+++|.
T Consensus 211 S~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr------------------------------~~V~~L~fr------- 253 (479)
T KOG0299|consen 211 SSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHR------------------------------GAVSSLAFR------- 253 (479)
T ss_pred cCCCcEEEecCCCceEEEecCcccchhhcccccc------------------------------cceeeeeee-------
Confidence 9999999776 9999999999999888877653 334455554
Q ss_pred EeecCCCEEEEEECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEE
Q 000316 1460 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1539 (1678)
Q Consensus 1460 a~sp~g~~Lasgs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lW 1539 (1678)
.....+++++.|.+|++|++.....+.++-+|++ .|..|... .-+..+-+|+.|+++++|
T Consensus 254 ---~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd------~v~~IdaL-----------~reR~vtVGgrDrT~rlw 313 (479)
T KOG0299|consen 254 ---KGTSELYSASADRSVKVWSIDQLSYVETLYGHQD------GVLGIDAL-----------SRERCVTVGGRDRTVRLW 313 (479)
T ss_pred ---cCccceeeeecCCceEEEehhHhHHHHHHhCCcc------ceeeechh-----------cccceEEeccccceeEEE
Confidence 3467899999999999999998888888876654 35555432 123456667799999999
Q ss_pred eCCCCcEEEEEeccCCCeEEEEcCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEee-cC-----------CCCEEE--EEe
Q 000316 1540 DVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK-GH-----------TNGISG--FSV 1605 (1678)
Q Consensus 1540 D~~tg~~i~~l~gH~~~V~svaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~-gH-----------~~~V~a--fSp 1605 (1678)
++. -+..-.+.+|.+.+-|++.-+...++|||.||+|.+|++.+.++ +++.+ .| ..+|++ ..|
T Consensus 314 Ki~-eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkp--lf~~~~AHgv~~~~~~~~~~~Witsla~i~ 390 (479)
T KOG0299|consen 314 KIP-EESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKP--LFTSRLAHGVIPELDPVNGNFWITSLAVIP 390 (479)
T ss_pred ecc-ccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCc--eeEeeccccccCCccccccccceeeeEecc
Confidence 994 34444678899999999977788999999999999999988743 33221 11 126664 778
Q ss_pred cCCEEEEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEE
Q 000316 1606 WGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG 1668 (1678)
Q Consensus 1606 dg~~LaSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatg 1668 (1678)
...++||||.+| |++|.++. |.- ...-+++. ...+.|++++|+++|+.+++|
T Consensus 391 ~sdL~asGS~~G~vrLW~i~~-----g~r--~i~~l~~l----s~~GfVNsl~f~~sgk~ivag 443 (479)
T KOG0299|consen 391 GSDLLASGSWSGCVRLWKIED-----GLR--AINLLYSL----SLVGFVNSLAFSNSGKRIVAG 443 (479)
T ss_pred cCceEEecCCCCceEEEEecC-----Ccc--ccceeeec----ccccEEEEEEEccCCCEEEEe
Confidence 899999999999 99999862 211 11112221 245789999999999965555
|
|
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-20 Score=205.04 Aligned_cols=292 Identities=15% Similarity=0.204 Sum_probs=196.0
Q ss_pred eEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCCCCe-----EEEE-EecCCccEEEEeecCCCCcE-EeC-
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN-----CVSG-YYGHEEVVNDICVLSSSGRI-ASC- 1391 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~tg~-----~l~~-l~gH~~~V~sV~fs~~~~~l-aS~- 1391 (1678)
+.+|+||.+.|++++|+.||++|+|++. |++|||||+.+-+ |++. +. -+--+.|.|.|+..-+ +++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~----Dr~Ir~w~~~DF~~~eHr~~R~nve--~dhpT~V~FapDc~s~vv~~~ 152 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISG----DRSIRLWDVRDFENKEHRCIRQNVE--YDHPTRVVFAPDCKSVVVSVK 152 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeC----CceEEEEecchhhhhhhhHhhcccc--CCCceEEEECCCcceEEEEEc
Confidence 5679999999999999999999999997 9999999997632 2221 11 1234678898887765 444
Q ss_pred -CCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEeecCCCEEEE
Q 000316 1392 -DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470 (1678)
Q Consensus 1392 -DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~sp~g~~Las 1470 (1678)
..++++|.....+- ..+..+. +.+.. .. -...|+-.+. .+.+..++.++++
T Consensus 153 ~g~~l~vyk~~K~~d-G~~~~~~-------------v~~D~--~~--f~~kh~v~~i----------~iGiA~~~k~ims 204 (420)
T KOG2096|consen 153 RGNKLCVYKLVKKTD-GSGSHHF-------------VHIDN--LE--FERKHQVDII----------NIGIAGNAKYIMS 204 (420)
T ss_pred cCCEEEEEEeeeccc-CCCCccc-------------ccccc--cc--cchhcccceE----------EEeecCCceEEEE
Confidence 56788876542211 0000000 00000 00 0001122222 2333445789999
Q ss_pred EECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEeCC---CC---
Q 000316 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR---SG--- 1544 (1678)
Q Consensus 1471 gs~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD~~---tg--- 1544 (1678)
++.|.+|.+||++ |+.+..+...... -... ..+|+|.++|+++---.|++|.+- .|
T Consensus 205 as~dt~i~lw~lk-Gq~L~~idtnq~~------n~~a-----------avSP~GRFia~~gFTpDVkVwE~~f~kdG~fq 266 (420)
T KOG2096|consen 205 ASLDTKICLWDLK-GQLLQSIDTNQSS------NYDA-----------AVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQ 266 (420)
T ss_pred ecCCCcEEEEecC-Cceeeeecccccc------ccce-----------eeCCCCcEEEEecCCCCceEEEEEeccCcchh
Confidence 9999999999998 8888776533211 0111 224777899999998999999873 33
Q ss_pred --cEEEEEeccCCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCC--CCCCeEeec--------CCCCEE-EEEecCCEE
Q 000316 1545 --NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNW--PSQPTVFKG--------HTNGIS-GFSVWGQDV 1610 (1678)
Q Consensus 1545 --~~i~~l~gH~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~--~~~~~~l~g--------H~~~V~-afSpdg~~L 1610 (1678)
+.+..++||+..|..++ +++...++|.|.||+++|||..-.. .+-...++. -..++. ++||.|+.|
T Consensus 267 ev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~l 346 (420)
T KOG2096|consen 267 EVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSL 346 (420)
T ss_pred hhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEE
Confidence 24567889999999999 8999999999999999999975321 011112221 123455 699999999
Q ss_pred EEEeCCCeEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEc
Q 000316 1611 ISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1611 aSgs~D~I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIw 1677 (1678)
|.+....+.++...+ |....... .-|.+.|++++|+++|+.++||| |..++++
T Consensus 347 A~s~gs~l~~~~se~-----g~~~~~~e--------~~h~~~Is~is~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 347 AVSFGSDLKVFASED-----GKDYPELE--------DIHSTTISSISYSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred EeecCCceEEEEccc-----CccchhHH--------HhhcCceeeEEecCCCcEEeeec-ceeeeee
Confidence 998877799998542 22111111 13888999999999999999998 6667663
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-21 Score=227.46 Aligned_cols=198 Identities=15% Similarity=0.185 Sum_probs=156.9
Q ss_pred CeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCc--------ChHHHHHHHHhcCCCchhHHHhhcc-CC
Q 000316 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKA--------SGQESKNFLRLIGVPSFDESSVPGC-LR 233 (1678)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~--------~~~~~~~~l~~~~~~~~~Ei~iL~~-l~ 233 (1678)
.|++.+.||+|+||.||+|.+.. ..+..+|+|.+..... ......++. +|+.++.+ ++
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~ 67 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKN-----NGQNLLALKEINVHNPAFGKDKRERDKSIGDIV--------SEVTIIKEQLR 67 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcC-----CCCceeeeeEeeccccccccccccchHHHHHHH--------HHHHHHhhcCC
Confidence 48889999999999999999642 2467899998864321 111222233 88888865 79
Q ss_pred CCcccceeeEEEeCCeEEEeccCCCC-CHHHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHh-CCceecCCCCCCeEe
Q 000316 234 HPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLL 309 (1678)
Q Consensus 234 HpNIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~-~gIiHRDLKP~NILl 309 (1678)
||||+++++++..++..++||||++| +|.+++.. .....+++..++.++.|++.||.|||+ +||+||||||+||++
T Consensus 68 h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~ 147 (269)
T cd08528 68 HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML 147 (269)
T ss_pred CCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE
Confidence 99999999999999999999999995 99988853 234568999999999999999999996 789999999999999
Q ss_pred cCCCceeEEEEecCCcccCCCCCcccccCCCCcceeecccccCcccccccccccccccccccccccCccchhhhHhhhcc
Q 000316 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1678)
Q Consensus 310 ~~~g~~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~isnfeyL~~ln~ 389 (1678)
+.++ .+||+|||++....... ......++..|+|||.+.+..++..+|+|+.|.+ .+..
T Consensus 148 ~~~~--~~~l~dfg~~~~~~~~~------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~l-------l~~l 206 (269)
T cd08528 148 GEDD--KVTITDFGLAKQKQPES------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCI-------LYQM 206 (269)
T ss_pred CCCC--cEEEecccceeeccccc------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHH-------HHHH
Confidence 9999 89999999998543211 0112346788999999998889999999999944 4444
Q ss_pred ccCCC
Q 000316 390 LAGRR 394 (1678)
Q Consensus 390 ~aGRs 394 (1678)
+.|+.
T Consensus 207 ~~g~~ 211 (269)
T cd08528 207 CTLQP 211 (269)
T ss_pred HhCCC
Confidence 55654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.8e-22 Score=226.10 Aligned_cols=168 Identities=14% Similarity=0.058 Sum_probs=139.2
Q ss_pred eCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCCcccceeeEEEeCCeEEE
Q 000316 173 CSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITS 252 (1678)
Q Consensus 173 G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~HpNIV~l~~~~~~~~~~~l 252 (1678)
|.||.||+|+++ .+++.+|+|.+...... . +|...+....||||+++++++.+.+..++
T Consensus 4 g~~~~v~~~~~~------~~~~~~~~K~i~~~~~~-------~--------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l 62 (237)
T cd05576 4 GVIDKVLLVMDT------RTQQTFILKGLRKSSEY-------S--------RERLTIIPHCVPNMVCLHKYIVSEDSVFL 62 (237)
T ss_pred cccceEEEEEEc------cCCcEEEEEeecchhhh-------h--------hHHHHHHhcCCCceeehhhheecCCeEEE
Confidence 899999999975 57889999998764211 1 45555555679999999999999999999
Q ss_pred eccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCceeEEEEecCCcccCCCC
Q 000316 253 VIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIA 331 (1678)
Q Consensus 253 VmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~~~lKL~DFGlA~~~~~~ 331 (1678)
||||++| +|.+++.. ...+++..+..++.|++.||+|||++||+||||||+||+++.++ .+||+|||.+......
T Consensus 63 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~df~~~~~~~~~ 138 (237)
T cd05576 63 VLQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG--HIQLTYFSRWSEVEDS 138 (237)
T ss_pred EEecCCCCCHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC--CEEEecccchhccccc
Confidence 9999995 99999873 44589999999999999999999999999999999999999999 8999999988643311
Q ss_pred CcccccCCCCcceeecccccCcccccccccccccccccccccccCccc
Q 000316 332 DWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~y~~~~d~W~~G~is 379 (1678)
. ....++..|+|||......++..+|+|+.|.+.
T Consensus 139 ~--------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 172 (237)
T cd05576 139 C--------------DGEAVENMYCAPEVGGISEETEACDWWSLGAIL 172 (237)
T ss_pred c--------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHH
Confidence 0 011245679999999888899999999999554
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.9e-23 Score=245.94 Aligned_cols=190 Identities=16% Similarity=0.182 Sum_probs=161.2
Q ss_pred cccccCCCeeEeeeeeeeCcEEEEEEEecCCCCccccceEEEEEEeccCCcChHHHHHHHHhcCCCchhHHHhhccCCCC
Q 000316 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 235 (1678)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~l~~~~~~~~~Ei~iL~~l~Hp 235 (1678)
...+-.++|+++..+|.|+||.||+|+++ ..+...|+|+++...... ...++ .|+-+++.++||
T Consensus 9 srrnP~ddyellqrvgsgTygdvyKaRd~------~s~elaavkvVkLep~dd---~~~iq-------qei~~~~dc~h~ 72 (829)
T KOG0576|consen 9 SRRNPQDDYELLQRVGSGTYGDVYKARDK------RSGELAAVKVVKLEPGDD---FSGIQ-------QEIGMLRDCRHP 72 (829)
T ss_pred hhcCCccchhheeeecCCcccchhhhccc------ccCchhhheeeeccCCcc---ccccc-------cceeeeecCCCc
Confidence 33355789999999999999999999976 578899999998643222 11222 899999999999
Q ss_pred cccceeeEEEeCCeEEEeccCCCC-CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCCCCeEecCCCc
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1678)
Q Consensus 236 NIV~l~~~~~~~~~~~lVmEy~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~gIiHRDLKP~NILl~~~g~ 314 (1678)
|||.+++.+...+.++++||||+| +|.++.. -.+++++.++.++.++.++||+|||++|-+|||||-.|||+++.|
T Consensus 73 nivay~gsylr~dklwicMEycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g- 149 (829)
T KOG0576|consen 73 NIVAYFGSYLRRDKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG- 149 (829)
T ss_pred ChHHHHhhhhhhcCcEEEEEecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC-
Confidence 999999999999999999999995 9999877 678899999999999999999999999999999999999999999
Q ss_pred eeEEEEecCCcccCCCCCcccccCCCCcceeecccccCccccccccc---ccccccccccccccC
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRG 376 (1678)
Q Consensus 315 ~~lKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~---~~~~y~~~~d~W~~G 376 (1678)
.+|++|||.+......- . ..-...||++|||||+. +...|+..+|+|..|
T Consensus 150 -DvklaDfgvsaqitati-----~------KrksfiGtpywmapEvaaverkggynqlcdiwa~g 202 (829)
T KOG0576|consen 150 -DVKLADFGVSAQITATI-----A------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALG 202 (829)
T ss_pred -ceeecccCchhhhhhhh-----h------hhhcccCCccccchhHHHHHhcccccccccccccc
Confidence 89999999987543110 0 11234599999999965 477899999999999
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-19 Score=188.71 Aligned_cols=294 Identities=18% Similarity=0.196 Sum_probs=221.2
Q ss_pred eeEEeccccccEEEEEEecCCCEEEEEecCCCCCCeEEEEeCC------CCe--------E-EEEEecCCccEEEEeecC
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT------RIN--------C-VSGYYGHEEVVNDICVLS 1383 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgS~d~~~DgtVrlWDl~------tg~--------~-l~~l~gH~~~V~sV~fs~ 1383 (1678)
++.++. -+.+|++|+|+|.|...+.||. .++.||--.. .+- . -+.-+-|.+.|+|++|+|
T Consensus 25 ~i~~l~-dsqairav~fhp~g~lyavgsn----skt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~ 99 (350)
T KOG0641|consen 25 AINILE-DSQAIRAVAFHPAGGLYAVGSN----SKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSP 99 (350)
T ss_pred EEEEec-chhheeeEEecCCCceEEeccC----CceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecC
Confidence 455555 5678999999999999999997 7898887431 110 0 112246899999999999
Q ss_pred CCCcEE--eCCCcEEEEECCCCceeEEecccCccccccCCCCCCccccccccccccccCCCCCCeEEeeecCCceeEeEe
Q 000316 1384 SSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHH 1461 (1678)
Q Consensus 1384 ~~~~la--S~DgtVrIWD~~tg~~~~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~v~sv~f~~~~vt~va~ 1461 (1678)
++..++ |.|++|++--.+...+- ..+|. +..+.|.+.|..++|-...
T Consensus 100 ~geliatgsndk~ik~l~fn~dt~~--~~g~d-----------------------le~nmhdgtirdl~fld~~------ 148 (350)
T KOG0641|consen 100 CGELIATGSNDKTIKVLPFNADTCN--ATGHD-----------------------LEFNMHDGTIRDLAFLDDP------ 148 (350)
T ss_pred ccCeEEecCCCceEEEEeccccccc--ccCcc-----------------------eeeeecCCceeeeEEecCC------
Confidence 999984 55999999876644331 12211 3345567778888874331
Q ss_pred ecCCCEEEEE-ECCCcEEEEECCCCeeeEEeeCCCCcccCCCcceEEEeeCCCccccCcccCCCCEEEEEecCCeEEEEe
Q 000316 1462 IECVERLVVG-IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1678)
Q Consensus 1462 sp~g~~Lasg-s~DgtVrlWDl~tg~~l~~l~~~~~~v~~~~~V~sva~~~~~~~s~dg~~p~g~~LasGs~Dg~I~lWD 1540 (1678)
...+..++++ ..|..|.+-|..+|+..+.+.+|++- |.++-. .+|-++++|+.|.+|++||
T Consensus 149 ~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtgh------ilalys------------wn~~m~~sgsqdktirfwd 210 (350)
T KOG0641|consen 149 ESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGH------ILALYS------------WNGAMFASGSQDKTIRFWD 210 (350)
T ss_pred CcCceEEEecCCCcceEEEeecCCCCcceeecCCccc------EEEEEE------------ecCcEEEccCCCceEEEEe
Confidence 1124455554 45778888899999999999887653 333321 3456899999999999999
Q ss_pred CCCCcEEEEEec--c-----CCCeEEEE-cCCCCEEEEEeCCCcEEEEEcCCCCCCCCeEeecCCCCEEE--EEecCCEE
Q 000316 1541 VRSGNVIASWRA--H-----DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDV 1610 (1678)
Q Consensus 1541 ~~tg~~i~~l~g--H-----~~~V~sva-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~L 1610 (1678)
+|-..++.++.. | +..|.+|+ .|.|++|+||-.|.+..+||++.+ +.++.+..|+..|.+ |||...++
T Consensus 211 lrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~--r~iq~f~phsadir~vrfsp~a~yl 288 (350)
T KOG0641|consen 211 LRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG--RMIQRFHPHSADIRCVRFSPGAHYL 288 (350)
T ss_pred eeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC--ceeeeeCCCccceeEEEeCCCceEE
Confidence 999888887742 3 25688888 999999999999999999999998 667789999999997 99999999
Q ss_pred EEEeCCC-eEEEecCCCCCCCCcceeccceeeeeecCCCccCcEEEEEEecCCCEEEEEeCCCcEEEcC
Q 000316 1611 ISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1611 aSgs~D~-I~vwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~svafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+||.|. |++-|+.. +...+... ...+ .|...+-.+.|+|..--|++.|.|.++.+|.
T Consensus 289 lt~syd~~ikltdlqg--dla~el~~-------~vv~-ehkdk~i~~rwh~~d~sfisssadkt~tlwa 347 (350)
T KOG0641|consen 289 LTCSYDMKIKLTDLQG--DLAHELPI-------MVVA-EHKDKAIQCRWHPQDFSFISSSADKTATLWA 347 (350)
T ss_pred EEecccceEEEeeccc--chhhcCce-------EEEE-eccCceEEEEecCccceeeeccCcceEEEec
Confidence 9999998 99999862 22222211 1111 4888888999999999999999999999994
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1678 | ||||
| 1mi1_A | 414 | Crystal Structure Of The Ph-Beach Domain Of Human N | 2e-25 | ||
| 1t77_A | 414 | Crystal Structure Of The Ph-Beach Domains Of Human | 7e-22 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 4e-06 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 4e-06 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 4e-06 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 5e-06 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 5e-06 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 1e-05 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-05 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-05 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 2e-05 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-05 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 2e-05 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-05 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 2e-05 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 3e-05 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 3e-05 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 3e-05 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 3e-05 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 3e-05 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 3e-05 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 3e-05 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 3e-05 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 3e-05 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 3e-05 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 3e-05 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-05 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-05 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 3e-05 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 4e-05 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 4e-05 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 5e-05 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 5e-05 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-05 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 5e-05 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 6e-05 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 6e-05 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 6e-05 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 6e-05 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 6e-05 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-05 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 6e-05 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 6e-05 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 6e-05 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 6e-05 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 6e-05 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 6e-05 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 6e-05 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 6e-05 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 7e-05 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 8e-05 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 1e-04 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 1e-04 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-04 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 1e-04 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 1e-04 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 1e-04 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 1e-04 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 1e-04 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 1e-04 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 1e-04 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-04 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 1e-04 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 1e-04 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 1e-04 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 1e-04 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 1e-04 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 1e-04 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 2e-04 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 2e-04 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 2e-04 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-04 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-04 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-04 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-04 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-04 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-04 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 2e-04 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 2e-04 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 3e-04 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 3e-04 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 3e-04 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 3e-04 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 3e-04 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 3e-04 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 3e-04 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 3e-04 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 3e-04 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-04 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 3e-04 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 3e-04 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-04 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 3e-04 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 3e-04 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-04 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-04 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 3e-04 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 3e-04 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-04 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 3e-04 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 3e-04 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 3e-04 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 3e-04 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 3e-04 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 3e-04 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 3e-04 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 3e-04 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 3e-04 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-04 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 3e-04 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 3e-04 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 3e-04 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 3e-04 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 3e-04 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-04 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 3e-04 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 3e-04 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-04 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 3e-04 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-04 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 3e-04 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-04 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-04 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 3e-04 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 3e-04 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-04 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-04 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 3e-04 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 3e-04 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 3e-04 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-04 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 3e-04 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 3e-04 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 3e-04 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-04 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 4e-04 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 4e-04 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 4e-04 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-04 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 5e-04 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 5e-04 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 5e-04 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 5e-04 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 5e-04 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 5e-04 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 5e-04 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 6e-04 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 6e-04 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 6e-04 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 7e-04 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 8e-04 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 8e-04 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 8e-04 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 8e-04 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 8e-04 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 8e-04 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 9e-04 |
| >pdb|1MI1|A Chain A, Crystal Structure Of The Ph-Beach Domain Of Human Neurobeachin Length = 414 | Back alignment and structure |
|
| >pdb|1T77|A Chain A, Crystal Structure Of The Ph-Beach Domains Of Human LrbaBGL Length = 414 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1678 | ||||
| d1t77a1 | 304 | a.169.1.1 (A:2186-2489) Lipopolysaccharide-respons | 2e-67 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-17 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 3e-12 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-12 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-07 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-11 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-06 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 5e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 6e-09 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-10 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-07 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-10 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 6e-08 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-10 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-10 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-10 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-06 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-10 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-07 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-10 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 2e-07 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 8e-10 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 7e-08 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 5e-05 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-09 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-07 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-09 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-04 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-09 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 0.002 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-09 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-09 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-04 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-09 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-04 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-09 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 0.004 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-09 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 0.001 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-09 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-07 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 5e-09 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 6e-09 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 9e-08 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 8e-09 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 0.003 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 9e-09 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 0.004 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-08 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 8e-05 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-05 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-04 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-08 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-08 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-08 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 8e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-04 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-07 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-05 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-07 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-07 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 5e-06 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-07 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 0.003 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-07 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-07 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-06 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 4e-07 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 4e-07 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-07 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 8e-04 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-07 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 7e-04 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 9e-07 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-06 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-04 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-06 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-06 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 8e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-06 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-04 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 6e-04 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-06 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-06 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 3e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 0.002 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-06 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-05 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-06 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-06 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-06 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-06 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-04 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-06 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-06 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-04 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-06 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 6e-06 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-05 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 6e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 7e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-05 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 8e-06 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-04 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 9e-06 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 0.003 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 9e-06 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 0.001 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.002 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-05 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-05 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-04 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-05 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 5e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 7e-05 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 3e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 5e-04 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 0.002 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 3e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 8e-05 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 4e-05 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 9e-05 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 1e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-04 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-04 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 7e-04 |
| >d1t77a1 a.169.1.1 (A:2186-2489) Lipopolysaccharide-responsive and beige-like anchor protein LRBA {Human (Homo sapiens) [TaxId: 9606]} Length = 304 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: BEACH domain superfamily: BEACH domain family: BEACH domain domain: Lipopolysaccharide-responsive and beige-like anchor protein LRBA species: Human (Homo sapiens) [TaxId: 9606]
Score = 227 bits (581), Expect = 2e-67
Identities = 81/277 (29%), Positives = 124/277 (44%), Gaps = 45/277 (16%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF--STKPDENFDSGSRDLSKS 428
RW E+SNFEYL+FLN +AGR + D + V PWVI S + D + RDLSK
Sbjct: 28 QRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKP 87
Query: 429 -----KWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY 483
R A E+ + H + V ++ R P + ++
Sbjct: 88 IGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGK 147
Query: 484 --EPNEYPSTMQRLYQWT------PDECIPEFYCDPQIFYSQHP----------GMTDLA 525
+ S++ R ++ + E IPEFY P++F + + ++D+
Sbjct: 148 FDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVE 207
Query: 526 VPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEP-- 583
+PPWA + EEF+ ++R ALES+ VS ++H WID+ FGYK G A+ A NV +
Sbjct: 208 LPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGA 267
Query: 584 ----------------TKPKSVGR--LQLFTQPHPVR 602
+ +S G+ QL +PHP R
Sbjct: 268 VNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 304
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 83.6 bits (205), Expect = 1e-17
Identities = 42/318 (13%), Positives = 103/318 (32%), Gaps = 22/318 (6%)
Query: 1313 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH 1372
W + ++ H + V + +A T++ W+ + GH
Sbjct: 3 WIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSAS----EDATIKVWDYETGDFERTLKGH 58
Query: 1373 EEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVF-------AEQSMDSLHGGSPSSS 1425
+ V DI S +ASC + + + S+ + G S
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118
Query: 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485
S+ T ++ + + + + + + + + ++R +
Sbjct: 119 ASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 175
Query: 1486 QKLHLWRG---EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542
+ R + + S + + + ++ +G +++DV
Sbjct: 176 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 235
Query: 1543 SGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS 1601
+G + + HD +V + ++S + DKTLR+WD + + H + ++
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK--TLNAHEHFVT 293
Query: 1602 G--FSVWGQDVISISNNK 1617
F V++ S ++
Sbjct: 294 SLDFHKTAPYVVTGSVDQ 311
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.5 bits (163), Expect = 3e-12
Identities = 45/236 (19%), Positives = 82/236 (34%), Gaps = 40/236 (16%)
Query: 1349 PGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLL 1406
T++ WE+ CV + GH E V + IASC D T+ VW T +
Sbjct: 119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 178
Query: 1407 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVE 1466
+ E IS ++ T S S L +
Sbjct: 179 AELREHR-------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS--------- 222
Query: 1467 RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1526
G + +++ D++ G L G + V + K +
Sbjct: 223 ----GSRDKTIKMWDVSTGMCLMTLVG------HDNWVRGVLFHSGGK-----------F 261
Query: 1527 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1581
I + R++D ++ + + AH+ +VT L +V+ S+D+T+++W+
Sbjct: 262 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.9 bits (163), Expect = 3e-12
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 10/117 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
S +E ++++ E + HPN+ +L + +I +
Sbjct: 47 TKSEEELEDYMV--------EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 98
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ +E ++ + Q L A+ YLH I HR + N+L T + + D
Sbjct: 99 VMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG--DIKLAD 153
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (124), Expect = 2e-07
Identities = 17/103 (16%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 714 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---N 770
G+ + + ++S + + D++S+G L E+ P ++ L
Sbjct: 172 GTPYWMAPEVVMCETSKDRPYDYKA--DVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 229
Query: 771 GDLPGV--MEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+ P + S+ + ++ C+ K+ R + LL+ P+
Sbjct: 230 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 272
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.3 bits (156), Expect = 3e-11
Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 18/201 (8%)
Query: 232 LRHPNVAPVLGLLKTSG-------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
+ P++ ++ + + ++ + L + +Q + +E +M
Sbjct: 62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQAFTEREASEIMKS 119
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 344
+ AI YLHS+ IAHR V P N+L T + + A T S C
Sbjct: 120 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL-----TDFGFAKETTSHNSLTTPC 174
Query: 345 CIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVM 404
+ + K +S D S + L + N G +
Sbjct: 175 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMY--ILLCGYPPFYSNH--GLAISPGMKTRIR 230
Query: 405 PWVIDFSTKPDENFDSGSRDL 425
+F + L
Sbjct: 231 MGQYEFPNPEWSEVSEEVKML 251
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 4e-06
Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDS---------ISLAVYLENGDLPG-VMEELPSHTRI 786
D S D++S+G ++ L P F S + + + + P E+ ++
Sbjct: 191 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 250
Query: 787 LVEACITKDWTRRPSAKSLLESPYF 811
L+ + + T+R + + P+
Sbjct: 251 LIRNLLKTEPTQRMTITEFMNHPWI 275
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.0 bits (154), Expect = 5e-11
Identities = 41/307 (13%), Positives = 79/307 (25%), Gaps = 39/307 (12%)
Query: 1310 ESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY 1369
+ +I+ ++R H + ++ G D + +A G + W+ N V
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSAS----QDGKLIIWDSYTTNKVHAI 93
Query: 1370 YGHEEVVNDICVLSSSGRIASCDGT-------LHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422
V S +A L + S
Sbjct: 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153
Query: 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1482
+ I + D L + L V G + S + D+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 1483 NQGQKLHLWRG---EPTELGF----PSLVSA--------------ICACGSEKMQAGGAV 1521
+G + G + + F + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 1522 ASPSW------IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLD 1574
S S+ + AG C ++D + HD V+ L + + + S D
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333
Query: 1575 KTLRIWD 1581
L+IW+
Sbjct: 334 SFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.4 bits (137), Expect = 6e-09
Identities = 44/312 (14%), Positives = 96/312 (30%), Gaps = 32/312 (10%)
Query: 1371 GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428
GH + + + S + S DG L +W+S T + +S + + + S +
Sbjct: 53 GHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSS-WVMTCAYAPSGNY 111
Query: 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1488
+ + + S R + + +
Sbjct: 112 VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDI 171
Query: 1489 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1548
+ T G V ++ ++ +G +L+DVR G
Sbjct: 172 ETGQQTTTFTGHTGDVMSLSLAPDTRLFV-----------SGACDASAKLWDVREGMCRQ 220
Query: 1549 SWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSV 1605
++ H+ + + P + + S D T R++DLR + GI+ FS
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280
Query: 1606 WGQDVISISNNKIGLSSLSKSADEDGQHRLV-PQKLYMVDNGAKNLSVLSSISILPFSRL 1664
G+ +++ +D + K A + + +S + +
Sbjct: 281 SGRLLLA--------------GYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA 326
Query: 1665 FLVGTEDGYLRL 1676
G+ D +L++
Sbjct: 327 VATGSWDSFLKI 338
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 62.3 bits (151), Expect = 1e-10
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 200 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 259
+ GK S ++ ++ ++ E LRHPN G V+
Sbjct: 48 MSYSGKQSNEKWQDIIK--------EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG 99
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319
+ ++L+ L E + + + L +AYLHS + HR V N+LL++ + +
Sbjct: 100 SASDLLEVHKKPL-QEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156
Query: 320 CD 321
D
Sbjct: 157 GD 158
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.5 bits (123), Expect = 4e-07
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 714 GSMEYQ--ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL--- 768
G+ + E++L + Y D++S+G EL R+P +++ L
Sbjct: 173 GTPYWMAPEVILAMDEGQYDGKV------DVWSLGITCIELAERKPPLFNMNAMSALYHI 226
Query: 769 -ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+N + R V++C+ K RP+++ LL+ +
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.5 bits (150), Expect = 2e-10
Identities = 40/280 (14%), Positives = 84/280 (30%), Gaps = 23/280 (8%)
Query: 1321 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDIC 1380
SS + +RSV D + T + + + + + D
Sbjct: 115 SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ--GHEQDIYSLDYF 172
Query: 1381 VLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440
S D T+ +W+ +TG+ + + + SP +
Sbjct: 173 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 232
Query: 1441 TLSSGILSTAFDGNLYTCLHHIECV---------ERLVVGIGNGSLRFIDINQGQKLHLW 1491
+G L D + H + V + +V G + S++ ++
Sbjct: 233 DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 292
Query: 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551
+ + + + + +I +G +D +SGN + +
Sbjct: 293 KT-----PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347
Query: 1552 AHDGYVTKLAA-------PEDHLLVSSSLDKTLRIWDLRR 1584
H V +A PE ++ + S D RIW ++
Sbjct: 348 GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.8 bits (130), Expect = 6e-08
Identities = 49/346 (14%), Positives = 107/346 (30%), Gaps = 60/346 (17%)
Query: 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSS 1385
H + V D + T G T Q + ++ + V+ D L++S
Sbjct: 61 HTSVVCCVKFSNDGEYLAT-----GCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTS 115
Query: 1386 GRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSG 1445
+S V S GK L+ AE + + + + + + + + SG
Sbjct: 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG 175
Query: 1446 ILSTA----------------------FDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483
+ + + T + + G + ++R D
Sbjct: 176 DKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSE 235
Query: 1484 QGQKLH-LWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542
G + L + G V ++ + + +G +L++++
Sbjct: 236 TGFLVERLDSENESGTGHKDSVYSVVFTRDGQ-----------SVVSGSLDRSVKLWNLQ 284
Query: 1543 SGNVIA------------SWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQ 1589
+ N + ++ H +V +A D ++S S D+ + WD + P
Sbjct: 285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 344
Query: 1590 PTVFKGHTNGISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRL 1635
+ +GH N + +V + N + D + R+
Sbjct: 345 --MLQGHRNSVISVAVANGSSLGPEYNVFA------TGSGDCKARI 382
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 62.0 bits (150), Expect = 2e-10
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 10/118 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLEN 263
+ E S+ L HP + + + + ++ L +
Sbjct: 64 TPYPLDKYTVKN--------EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD 115
Query: 264 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ + SE V M Q + ++H I H + P N++ S + I D
Sbjct: 116 RIAAEDYKM-SEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIID 172
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 48.5 bits (115), Expect = 4e-06
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN---GDL---PGVMEELPSHTRILVEA 790
D+++IG L L F L+N D + + ++
Sbjct: 206 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 265
Query: 791 CITKDWTRRPSAKSLLESPYF 811
+ K+ +R + LE P+
Sbjct: 266 LLQKEPRKRLTVHDALEHPWL 286
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.8 bits (148), Expect = 2e-10
Identities = 57/339 (16%), Positives = 111/339 (32%), Gaps = 36/339 (10%)
Query: 1358 WELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL-------- 1406
W + GH++ V I L G S D TL VW++ TGK L
Sbjct: 1 WRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 1407 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVE 1466
V++ Q D++ + K+ + G + +
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 118
Query: 1467 RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA--------- 1517
V I G + + + + + + + + E
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 178
Query: 1518 --GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDK 1575
+ +G R++DV +GN I + H + + +D++LVS + D
Sbjct: 179 RVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILVSGNADS 237
Query: 1576 TLRIWDLRRNWP-SQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQH 1633
T++IWD++ H + ++ VI+ S++ + L L + G+
Sbjct: 238 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL-----KTGE- 291
Query: 1634 RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDG 1672
+ L +++G V I + VG+ +G
Sbjct: 292 --FIRNLVTLESGGSGGVV-WRIRASNTKLVCAVGSRNG 327
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 62.0 bits (150), Expect = 2e-10
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
LRHP + + + + + L + N + SE M Q+ +
Sbjct: 80 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMRQVCKGLC 138
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
++H H + P N++ T + L + D
Sbjct: 139 HMHENNYVHLDLKPENIMFTTKRSNELKLID 169
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 49.3 bits (117), Expect = 2e-06
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLAVYLEN-----GDLPG-VMEELPSHTRILVEACITK 794
D++S+G L L F + L N ++ + + + +
Sbjct: 207 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA 266
Query: 795 DWTRRPSAKSLLESPYF 811
D R + LE P+
Sbjct: 267 DPNTRMTIHQALEHPWL 283
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.8 bits (147), Expect = 3e-10
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E + LRHPN+ + G + + ++ P + E + +
Sbjct: 56 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 114
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
L +A++Y HS + HR + P N+LL + L I D
Sbjct: 115 LANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIAD 149
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (125), Expect = 1e-07
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN--GDLPGVMEELPSHTRILVEACITK 794
D D++S+G L E + +P F++ + + + + R L+ +
Sbjct: 182 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 241
Query: 795 DWTRRPSAKSLLESPYF 811
+ ++RP + +LE P+
Sbjct: 242 NPSQRPMLREVLEHPWI 258
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.2 bits (148), Expect = 3e-10
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLEN 263
K G + + E S+ RH N+ + ++ + + +
Sbjct: 39 KVKGTDQVLVKK--------EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE 90
Query: 264 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ S L +E + ++Q+ A+ +LHS I H + P N++ S + I +
Sbjct: 91 RINTSAFEL-NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIE 147
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.7 bits (126), Expect = 2e-07
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEACITK 794
D++S+G L+ L F + + +E N + +E+ V+ + K
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVK 244
Query: 795 DWTRRPSAKSLLESPYF 811
+ R +A L+ P+
Sbjct: 245 ERKSRMTASEALQHPWL 261
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 8e-10
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
++ K + +N + E + L H NV G + + +
Sbjct: 38 VDMKRAVDCPENIKK--------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ E + +QL++ + YLH +GI HR + P N+LL + L I D
Sbjct: 90 LFDRIEPDIGM-PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISD 146
Query: 322 KPL 324
L
Sbjct: 147 FGL 149
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 7e-08
Identities = 10/76 (13%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS-----LAVYLENGDLPGVMEELPSHTRILVEACITKD 795
D++S G +L + +D S + + E +++ S L+ + ++
Sbjct: 188 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVEN 247
Query: 796 WTRRPSAKSLLESPYF 811
+ R + + + ++
Sbjct: 248 PSARITIPDIKKDRWY 263
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.9 bits (142), Expect = 1e-09
Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 10/120 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
K FL E+++ L+H + + ++ + +L +
Sbjct: 46 KQGSMSPDAFLA--------EANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 97
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324
L+ + + + Q+ +A++ HR + +N+L++D I D L
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGL 155
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (105), Expect = 5e-05
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 785
+ D++S G LL E + R + ++ + LE G + P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY 240
Query: 786 ILVEACITKDWTRRPSAKSLLE--SPYFPST 814
L+ C + RP+ L +F +T
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 58.9 bits (142), Expect = 1e-09
Identities = 22/95 (23%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADW 333
SE R +M LL I LH L I HR + P N+LL D + + D +
Sbjct: 108 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEK 165
Query: 334 CTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
E + +D S
Sbjct: 166 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 51.6 bits (123), Expect = 3e-07
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEA 790
D++S G ++ L P F + L +G+ ++ + LV
Sbjct: 193 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 791 CITKDWTRRPSAKSLLESPYF 811
+ +R +A+ L P+F
Sbjct: 253 FLVVQPQKRYTAEEALAHPFF 273
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.2 bits (140), Expect = 3e-09
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 11/145 (7%)
Query: 224 DESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 283
DE + + HP + + G + + I ++ L + +F
Sbjct: 53 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAA 111
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 343
++ A+ YLHS I +R + P N+LL + + I D +P
Sbjct: 112 EVCLALEYLHSKDIIYRDLKPENILLDKNG--HIKITD--------FGFAKYVPDVTYTL 161
Query: 344 CCIEGCSSQGLYADLKLSQSMDWHS 368
C + + + ++S+DW S
Sbjct: 162 CGTPDYIAPEVVSTKPYNKSIDWWS 186
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.2 bits (101), Expect = 2e-04
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDLPGVMEELPSHTRILVEACIT 793
+ S D +S G L+ E+ F + E N +L + L+ IT
Sbjct: 179 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR-FPPFFNEDVKDLLSRLIT 237
Query: 794 KDWTRR-----PSAKSLLESPYF 811
+D ++R + + P+F
Sbjct: 238 RDLSQRLGNLQNGTEDVKNHPWF 260
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 57.8 bits (139), Expect = 3e-09
Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 10/167 (5%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
++ + ++ ++FL E+S+ G HPNV + G++ S + +
Sbjct: 62 LKSGYTEKQRRDFLS--------EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 113
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ + + + ++ + + + YL + HR + N+L+ + + D
Sbjct: 114 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL--VCKVSD 171
Query: 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
L F TS + G ++ K + + D S
Sbjct: 172 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.7 bits (92), Expect = 0.002
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 741 DIFSIGCLLAEL--HLRRPLFDSISLAVY--LENGDLPGVMEELPSHTRILVEACITKDW 796
D++S G ++ E+ + RP +D + V +E + PS L+ C KD
Sbjct: 215 DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDR 274
Query: 797 TRRPSAKSLLES 808
RP ++ +
Sbjct: 275 NHRPKFGQIVNT 286
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.3 bits (140), Expect = 3e-09
Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 11/144 (7%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E + + P + + K + + V+ SE H RF Q
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQ 149
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 344
++ YLHSL + +R + P N+L+ + + A T + G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG--------FAKRVKGRTWTLCGT 201
Query: 345 CIEGCSSQGLYADLKLSQSMDWHS 368
++++DW +
Sbjct: 202 PEALAPEI--ILSKGYNKAVDWWA 223
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 3e-09
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDWT 797
DI+S+GCLL EL P F + S LA + G + ++ +
Sbjct: 196 DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDY 255
Query: 798 RRPSAKSLLESPY 810
RPS + +LE+P
Sbjct: 256 HRPSVEEILENPL 268
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.1 bits (101), Expect = 2e-04
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 20/128 (15%)
Query: 204 GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL--GLLKTSGLITSVIPKTPY-T 260
G + E + + E ++ L+HPN+ + +T+ + V+
Sbjct: 40 GSMTEAEKQMLVS--------EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD 91
Query: 261 LENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLG-----IAHRSVCPSNVLLTDSC 313
L +++ + E V +M QL A+ H + HR + P+NV L
Sbjct: 92 LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ 151
Query: 314 WSWLYICD 321
+ + D
Sbjct: 152 --NVKLGD 157
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (139), Expect = 4e-09
Identities = 34/146 (23%), Positives = 53/146 (36%), Gaps = 16/146 (10%)
Query: 232 LRHPNVAPVLGLLKTSG---------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 282
L H N+ + +SG L+ +P+T Y + + L +V+ M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLYM 128
Query: 283 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMI 342
YQL ++AY+HS GI HR + P N+LL +CD +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-KLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 343 GCCIEGCSSQGLYADLKLSQSMDWHS 368
E Y + S+D S
Sbjct: 188 YRAPELIFGATDY-----TSSIDVWS 208
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 2e-04
Identities = 24/154 (15%), Positives = 38/154 (24%), Gaps = 35/154 (22%)
Query: 689 ENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCL 748
+ + L D L V E ++ Y +R S D++S GC+
Sbjct: 157 PDTAVLKLCDFGSAKQL----VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 749 LAELHLRRPLFD-------------------------------SISLAVYLENGDLPGVM 777
LAEL L +P+F +
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272
Query: 778 EELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
P L + T R + +F
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 4e-09
Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 14/170 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
+ ++F+ E+ V L HP + + G+ I V + +
Sbjct: 38 REGAMSEEDFIE--------EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324
+ L + + + + +AYL + HR + N L+ ++ + + D +
Sbjct: 90 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKVSDFGM 147
Query: 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWW 374
F + D ++ +S +++ + S D S W
Sbjct: 148 TRF--VLDDQYTSSTGTKFPV--KWASPEVFSFSRYSSKSDVWSFGVLMW 193
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 0.004
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLF----DSISLAVYLENGDLPGVMEELPSHTRILVEACI 792
D++S G L+ E+ + + + + G +H ++ C
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 239
Query: 793 TKDWTRRPSAKSLLE 807
+ RP+ LL
Sbjct: 240 KERPEDRPAFSRLLR 254
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 57.5 bits (138), Expect = 4e-09
Identities = 21/96 (21%), Positives = 33/96 (34%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
ES + ++ P + G ++ + L + S V L Q
Sbjct: 52 ESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQ 111
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320
++S I Y+HS HR V P N L+ L
Sbjct: 112 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI 147
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.6 bits (94), Expect = 0.001
Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 13/98 (13%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE----------NGDLPGVMEELPSHTRI 786
D+ S+G +L +L + + A + + + + + PS
Sbjct: 191 SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFAT 250
Query: 787 LVEACITKDWTRRPSA---KSLLESPYFPSTVKSSYLF 821
+ C + + +P + L + + Y+F
Sbjct: 251 YLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVF 288
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 5e-09
Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 7/114 (6%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
++PN+ L + V+ + E + + + L A+ +
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGS--LTDVVTETCMDEGQIAAVCRECLQALEF 131
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCC 345
LHS + HR + N+LL + + D GF + S M+G
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDG--SVKLTD---FGFCAQITPEQSKRSTMVGTP 180
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (122), Expect = 4e-07
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVM-----EELPSHTRILVEAC 791
DI+S+G + E+ P + + + L G E+L + R + C
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 792 ITKDWTRRPSAKSLLESPYF 811
+ D +R SAK LL+ +
Sbjct: 254 LDMDVEKRGSAKELLQHQFL 273
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 57.5 bits (138), Expect = 5e-09
Identities = 45/233 (19%), Positives = 76/233 (32%), Gaps = 16/233 (6%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
PN+ + ++K T + + Q +++ +RF MY++L A+
Sbjct: 86 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALD 143
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCS 350
Y HS+GI HR V P NV++ L + D L F + + E
Sbjct: 144 YCHSMGIMHRDVKPHNVMIDHEHRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 202
Query: 351 SQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF 410
+Y S+D S + + F + + + D+
Sbjct: 203 DYQMY-----DYSLDMWSLGCMLA--SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 411 STKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVC 463
K + D D+ R + + SE H VS E L L
Sbjct: 256 IDKYNIELDPRFNDILGRHSR------KRWERFVHSENQHLVSPEALDFLDKL 302
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.8 bits (135), Expect = 6e-09
Identities = 38/293 (12%), Positives = 83/293 (28%), Gaps = 43/293 (14%)
Query: 1359 ELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVFAEQSMD 1415
L RI+C E + L + D T+ +W+ T + + +
Sbjct: 4 SLQRIHC------RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGS 57
Query: 1416 SLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475
L I + +++G + + LH +V +
Sbjct: 58 VLC--LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR 115
Query: 1476 SLRFIDINQGQKLHLWRGEPTELGFPSLV------------------------SAICACG 1511
S+ D+ + L R ++V +
Sbjct: 116 SIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLN 175
Query: 1512 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSS 1571
K + +G S RL+D+ G + H+ + + ++ +VS
Sbjct: 176 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHE-ELVRCIRFDNKRIVSG 234
Query: 1572 SLDKTLRIWDLRRNWPSQPT-------VFKGHTNGISGFSVWGQDVISISNNK 1617
+ D +++WDL + H+ + ++S S++
Sbjct: 235 AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 287
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (126), Expect = 9e-08
Identities = 43/294 (14%), Positives = 93/294 (31%), Gaps = 37/294 (12%)
Query: 1320 LSSIRAHHGALRSV-AVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378
L I + V + D+ + + T++ W+ + C GH V
Sbjct: 5 LQRIHCRSETSKGVYCLQYDDQKIVSGL----RDNTIKIWDKNTLECKRILTGHTGSVLC 60
Query: 1379 ICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI-NTDQVGML 1437
+ S D T+ VW+ TG++L+ LH + + + +
Sbjct: 61 LQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVW 120
Query: 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTE 1497
+ + + L G+ + +V G+ +++ + + + + G
Sbjct: 121 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180
Query: 1498 LGFPSLVSAICACG---------------------SEKMQAGGAVASPSWIAAGLSSGQC 1536
+ + G + I +G G+
Sbjct: 181 IACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKI 240
Query: 1537 RLFDVRSGN---------VIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWD 1581
+++D+ + + + H G V +L ++ +VSSS D T+ IWD
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQ-FDEFQIVSSSHDDTILIWD 293
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.0 bits (137), Expect = 8e-09
Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
P + + T ++ ++ L L + + SE +RF +++ +
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLE 121
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCS 350
++H+ + +R + P+N+LL + + I D +A + +
Sbjct: 122 HMHNRFVVYRDLKPANILLDE--HGHVRISD------LGLACDFSKKKPHASVGTHGYMA 173
Query: 351 SQGLYADLKLSQSMDWHS 368
+ L + S DW S
Sbjct: 174 PEVLQKGVAYDSSADWFS 191
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.3 bits (91), Expect = 0.003
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE-----NGDLPGVMEELPSHTRILVEAC 791
D S D FS+GC+L +L F E + + R L+E
Sbjct: 184 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 243
Query: 792 ITKDWTRRPS-----AKSLLESPYF 811
+ +D RR A+ + ESP+F
Sbjct: 244 LQRDVNRRLGCLGRGAQEVKESPFF 268
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (135), Expect = 9e-09
Identities = 16/123 (13%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
++ + ++ +FL E+ + G H N+ + G++ + +
Sbjct: 44 LKAGYTEKQRVDFLG--------EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA 95
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ + S + ++ + + + YL ++ HR + N+L+ + + D
Sbjct: 96 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKVSD 153
Query: 322 KPL 324
L
Sbjct: 154 FGL 156
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (89), Expect = 0.004
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRILVEACITKDW 796
D++S G ++ E+ + + +G + PS L+ C ++
Sbjct: 195 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 254
Query: 797 TRRPSAKSLLE 807
RRP ++
Sbjct: 255 ARRPKFADIVS 265
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.8 bits (134), Expect = 1e-08
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 207 SGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG----LITSVIPKTPYTLE 262
+ ++ FL E+SV LRH N+ +LG++ ++T + K +L
Sbjct: 40 NDATAQAFLA--------EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG--SLV 89
Query: 263 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+ L+ ++ + + A+ YL HR + NVL+++
Sbjct: 90 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN 140
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (103), Expect = 8e-05
Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 741 DIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDW 796
D++S G LL E R + I + +E G + P +++ C D
Sbjct: 182 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 241
Query: 797 TRRPSAKSLLE 807
RPS L E
Sbjct: 242 AMRPSFLQLRE 252
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (132), Expect = 2e-08
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 6/137 (4%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L HP + + + + + E RF +++SA+ Y
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEY 123
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 351
LH GI HR + P N+LL + + I D G + + S
Sbjct: 124 LHGKGIIHRDLKPENILLNEDM--HIQITD---FGTAKVLSPESKQARANSFVGTAQYVS 178
Query: 352 QGLYADLKLSQSMDWHS 368
L + +S D +
Sbjct: 179 PELLTEKSACKSSDLWA 195
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.4 bits (107), Expect = 3e-05
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN-----GDLPGVMEELPSHTRILVEAC 791
S D++++GC++ +L P F + + + + D P E+ R LVE
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP---EKFFPKARDLVEKL 244
Query: 792 ITKDWTRRPSAK------SLLESPYF 811
+ D T+R + L P+F
Sbjct: 245 LVLDATKRLGCEEMEGYGPLKAHPFF 270
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.7 bits (131), Expect = 3e-08
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLEN 263
K E + FL+ E++V ++HPN+ +LG+ + Y L +
Sbjct: 51 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 102
Query: 264 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
L+ S + ++ Q+ SA+ YL HR + N L+ ++
Sbjct: 103 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 152
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.9 bits (131), Expect = 3e-08
Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 13/143 (9%)
Query: 231 CLRHPNVAPVLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 285
HPNV + + S +T V L L P ++ +M+QL
Sbjct: 66 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 125
Query: 286 LSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCC 345
L + +LHS + HR + P N+L+T S L +A + +
Sbjct: 126 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--------LARIYSFQMALTSVVV 177
Query: 346 IEGCSSQGLYADLKLSQSMDWHS 368
+ + + +D S
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWS 200
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 29/104 (27%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN-------------------------- 770
D++S+GC+ AE+ R+PLF S L
Sbjct: 193 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS 252
Query: 771 ---GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+ + ++ + L+ C+T + +R SA S L PYF
Sbjct: 253 KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 296
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 4e-08
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
P + G + G I+ + + + + E + + ++ + Y
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILGKVSIAVIKGLTY 119
Query: 292 LHS-LGIAHRSVCPSNVLLTDSCWSWLYICD 321
L I HR V PSN+L+ + +CD
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRG--EIKLCD 148
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.3 bits (130), Expect = 4e-08
Identities = 19/118 (16%), Positives = 46/118 (38%), Gaps = 13/118 (11%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG--LITSVIPKTPY 259
++ +++ +R E+ + L +P + ++G+ + L+ +
Sbjct: 44 LKQGTEKADTEEMMR--------EAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGG-- 93
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317
L L + +V L++Q+ + YL HR + NVLL + ++ +
Sbjct: 94 PLHKFLVGKREEI-PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKI 150
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (129), Expect = 5e-08
Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG--LITSVIPKTPYTLE 262
+ Q+ + F E V RH N+ +G ++T + +L
Sbjct: 42 APTPQQLQAFKN--------EVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGS--SLY 91
Query: 263 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311
+ L + + Q + YLH+ I HR + +N+ L +
Sbjct: 92 HHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (113), Expect = 5e-06
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 714 GSMEYQ--ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN- 770
GS+ + E++ + K+ YS D+++ G +L EL + + +I+ +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSF------QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Query: 771 -------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808
DL V P + L+ C+ K RP +L S
Sbjct: 222 VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.1 bits (128), Expect = 8e-08
Identities = 28/298 (9%), Positives = 73/298 (24%), Gaps = 5/298 (1%)
Query: 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377
L + H G + ++ + + + K +
Sbjct: 44 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDI 102
Query: 1378 DICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD---QV 1434
S D TLHVW + E+ L +P + +
Sbjct: 103 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 162
Query: 1435 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1494
+ + + ++S ++D L ++ G + I ++ ++ +
Sbjct: 163 SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD 222
Query: 1495 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1554
T + + G + ++ + H
Sbjct: 223 TTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHT 282
Query: 1555 GYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVIS 1612
++ S + I++LR + I + G+ +++
Sbjct: 283 NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH-ANILKDADQIWSVNFKGKTLVA 339
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.3 bits (105), Expect = 5e-05
Identities = 18/84 (21%), Positives = 34/84 (40%)
Query: 1523 SPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDL 1582
+++ G R++D + + HDG V L +LVS S D+T+R+WD+
Sbjct: 22 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDI 81
Query: 1583 RRNWPSQPTVFKGHTNGISGFSVW 1606
++ + T +
Sbjct: 82 KKGCCTHVFEGHNSTVRCLDIVEY 105
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.7 bits (101), Expect = 1e-04
Identities = 12/64 (18%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 1548 ASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWG 1607
+ R H V ED+ +++ + DK +R++D GH G+
Sbjct: 6 TTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINK--KFLLQLSGHDGGVWALKYAH 63
Query: 1608 QDVI 1611
++
Sbjct: 64 GGIL 67
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (127), Expect = 1e-07
Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 10/139 (7%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAI 289
HP + + +T + V+ L +Q F +++ +
Sbjct: 59 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGL 116
Query: 290 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGC 349
+LHS GI +R + N+LL I D F + C
Sbjct: 117 QFLHSKGIVYRDLKLDNILLDKDGHIK--IAD-----FGMCKENMLGDAKTNTFCGTPDY 169
Query: 350 SSQGLYADLKLSQSMDWHS 368
+ + K + S+DW S
Sbjct: 170 IAPEILLGQKYNHSVDWWS 188
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.0 bits (111), Expect = 1e-05
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN--GDLPGVMEELPSHTRILVEACITK 794
+ S D +S G LL E+ + + F + D P L + L+ +
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR 240
Query: 795 DWTRRPSAKS-LLESPYF 811
+ +R + + + P F
Sbjct: 241 EPEKRLGVRGDIRQHPLF 258
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 52.9 bits (126), Expect = 1e-07
Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L P + GL ++ L S V Q+L+ +
Sbjct: 57 LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 292 LHSLGIAHRSVCPSNVLLTDSCW---SWLYICD----KPLVGFNSIADWCTIPTSPMIGC 344
+H + +R + P N L+ + +Y+ D K + + G
Sbjct: 117 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 176
Query: 345 C 345
Sbjct: 177 A 177
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 53.1 bits (127), Expect = 1e-07
Identities = 18/121 (14%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEA 790
+ D +SIG + L P F + A E + +++ + +
Sbjct: 187 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 246
Query: 791 CITKDWTRRPSAKSLLESPYF-PSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKA 849
+ KD +R + + L+ P+ T + + + I ++ ++ ++ F ++
Sbjct: 247 LMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRH 306
Query: 850 M 850
M
Sbjct: 307 M 307
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 48.1 bits (114), Expect = 5e-06
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 232 LRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 288
++HPN+ + + ++ G LI ++ L + + +E L++Q+L A
Sbjct: 64 IKHPNIVALDDIYESGGHLYLIMQLVSGG--ELFDRIV--EKGFYTERDASRLIFQVLDA 119
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSW-LYICDKPL 324
+ YLH LGI HR + P N+L + I D L
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 156
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.3 bits (127), Expect = 1e-07
Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 232 LRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 288
+RH NV +L + T P+ ++ + + E ++FL+YQ+L
Sbjct: 74 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 133
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337
+ Y+H+ GI HR + P N+ + + C + + + +
Sbjct: 134 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTR 182
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (91), Expect = 0.003
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 33/108 (30%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAV------------------------------ 766
+ DI+S+GC++AE+ + LF
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256
Query: 767 ---YLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
LE D ++ L+E + D +R +A L PYF
Sbjct: 257 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 304
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 2e-07
Identities = 18/136 (13%), Positives = 39/136 (28%), Gaps = 28/136 (20%)
Query: 231 CLRHPNVAPVLG----------------------LLKTSGLITSVIPKTPYTLENILQFS 268
H N+ +LG L++ S + + +
Sbjct: 97 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156
Query: 269 PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD----KPL 324
+ + + YQ+ + +L HR + NVL+T + ICD + +
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK--VVKICDFGLARDI 214
Query: 325 VGFNSIADWCTIPTSP 340
+ ++
Sbjct: 215 MSDSNYVVRGNARLPV 230
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.6 bits (123), Expect = 2e-07
Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 1/108 (0%)
Query: 233 RHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYL 292
V +L + ++ + + + E R +Q+L A+ +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 293 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSP 340
H+ G+ HR + N+L+ + L + D + +
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLKDTVYTDFDGTR 173
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.5 bits (115), Expect = 3e-06
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKDW 796
S ++S+G LL ++ F+ + G + + + S + L+ C+
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE---EIIRGQVF-FRQRVSSECQHLIRWCLALRP 243
Query: 797 TRRPSAKSLLESPYF 811
+ RP+ + + P+
Sbjct: 244 SDRPTFEEIQNHPWM 258
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.2 bits (122), Expect = 4e-07
Identities = 17/113 (15%), Positives = 30/113 (26%), Gaps = 8/113 (7%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
K F+ E+ V L H + + G+ I +
Sbjct: 37 KEGSMSEDEFIE--------EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317
+ + + A+ YL S HR + N L+ D +
Sbjct: 89 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 141
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 51.3 bits (122), Expect = 4e-07
Identities = 24/151 (15%), Positives = 47/151 (31%), Gaps = 15/151 (9%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSG-------LITSVIPKTPYTLENILQFSPNALKSEWH 277
E+ L HP + V + ++ + TL +I+ +
Sbjct: 57 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGV--TLRDIVHTEGP--MTPKR 112
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337
++ A+ + H GI HR V P+N++++ + + +IAD
Sbjct: 113 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI----ARAIADSGNSV 168
Query: 338 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
T S + D +S
Sbjct: 169 TQTAAVIGTAQYLSPEQARGDSVDARSDVYS 199
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.8 bits (123), Expect = 4e-07
Identities = 40/235 (17%), Positives = 82/235 (34%), Gaps = 22/235 (9%)
Query: 232 LRHPNVAPVLGLLKTSGLIT--SVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 289
RH N+ + +++ + V T ++ + S H+ + +YQ+L +
Sbjct: 63 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 122
Query: 290 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGC 349
Y+HS + HR + PSN+LL +C L ICD L P G E
Sbjct: 123 KYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARV-------ADPDHDHTGFLTEYV 173
Query: 350 SSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTFHMVMPWVI 408
+++ A + S + + W G + L+ R + + + ++
Sbjct: 174 ATRWYRAPEIMLNSKGYTKSIDIWSVG-------CILAEMLSNRPIFPGKHYLDQLNHIL 226
Query: 409 DFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVC 463
P + + +L + L+ + + + + + L L
Sbjct: 227 GILGSPSQEDLNCIINLKARNYLLSLPHKN---KVPWNRLFPNADSKALDLLDKM 278
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.4 bits (96), Expect = 8e-04
Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 33/149 (22%)
Query: 696 LSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR 755
+ D L + + EY +R + S DI+S+GC+LAE+
Sbjct: 150 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 209
Query: 756 RPLFDSISLAVYLEN---------------------------------GDLPGVMEELPS 782
RP+F L + + S
Sbjct: 210 RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADS 269
Query: 783 HTRILVEACITKDWTRRPSAKSLLESPYF 811
L++ +T + +R + L PY
Sbjct: 270 KALDLLDKMLTFNPHKRIEVEQALAHPYL 298
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.7 bits (123), Expect = 4e-07
Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMY 283
ES V RHP + + +T + V+ L L + +E RF
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGA 112
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 343
+++SA+ YLHS + +R + N++L + I D G G
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITD---FGLCKEGISDGATMKTFCG 167
Query: 344 CCIEGCSSQGLYADLKLSQSMDWHS 368
+ + D +++DW
Sbjct: 168 TP--EYLAPEVLEDNDYGRAVDWWG 190
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (96), Expect = 7e-04
Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 16/106 (15%)
Query: 714 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---N 770
G+ EY + D + +G ++ E+ R F + E
Sbjct: 167 GTPEYLAPEVLEDNDYGRAV-------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 771 GDLPGVMEELPSHTRILVEACITKDWTRRPS-----AKSLLESPYF 811
++ L + L+ + KD +R AK ++E +F
Sbjct: 220 EEIR-FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.6 bits (119), Expect = 9e-07
Identities = 26/292 (8%), Positives = 64/292 (21%), Gaps = 41/292 (14%)
Query: 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSG-----YYGHEEVVNDIC 1380
H + +V + V+T G KG V+ W+++ S + +
Sbjct: 50 HGEVVCAVTISNPTRHVYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCK 104
Query: 1381 VLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440
+L + + + S + + N
Sbjct: 105 LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164
Query: 1441 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS------------------------ 1476
+ + C++ G +
Sbjct: 165 IAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT 224
Query: 1477 -----LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1531
L + + + + L + + W +
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTG 284
Query: 1532 SSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDL 1582
+ G I + V + +D +V+ S DK ++++
Sbjct: 285 KDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 49.9 bits (118), Expect = 1e-06
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 7/144 (4%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E S+ L+H N+ + ++ T + V L+ +L L + + Q
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGL-ESVTAKSFLLQ 108
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 344
LL+ IAY H + HR + P N+L+ L I D L I +
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWY 166
Query: 345 CIEGCSSQGLYADLKLSQSMDWHS 368
L K S ++D S
Sbjct: 167 RAPDV----LMGSKKYSTTIDIWS 186
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 31/139 (22%)
Query: 704 LLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSIS 763
L + L +R + + DI+S+GC+ AE+ PLF +S
Sbjct: 146 LARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 764 LAVYLEN-------------------------------GDLPGVMEELPSHTRILVEACI 792
A L ++ L L+ +
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 793 TKDWTRRPSAKSLLESPYF 811
D +R +AK LE YF
Sbjct: 266 KLDPNQRITAKQALEHAYF 284
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 1e-06
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 9/112 (8%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
+ S + +K L E+ V + +P+V +LG+ TS + L
Sbjct: 46 LREATSPKANKEILD--------EAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 97
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+ ++ Q+ + YL + HR + NVL+
Sbjct: 98 LDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 148
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (117), Expect = 1e-06
Identities = 26/169 (15%), Positives = 47/169 (27%), Gaps = 13/169 (7%)
Query: 200 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 259
L + + + +F+R E + L H N+ + G++ T + V P
Sbjct: 44 LKPDVLSQPEAMDDFIR--------EVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPL 94
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319
+ Q+ + YL S HR + N+LL + I
Sbjct: 95 GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 152
Query: 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
D L+ D + + S + D
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPF--AWCAPESLKTRTFSHASDTWM 199
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (95), Expect = 8e-04
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 737 DCSKDIFSIGCLLAE-LHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRILVEAC 791
+ D + G L E + + ++ L + G+ E+ P ++ C
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQC 251
Query: 792 ITKDWTRRPSAKSLLE 807
RP+ +L +
Sbjct: 252 WAHKPEDRPTFVALRD 267
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 50.2 bits (118), Expect = 1e-06
Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 1525 SWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1581
+ IA ++ + +++ + + H+G VT + AP+ + +V+ D+ +W
Sbjct: 20 TQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 79
Query: 1582 LRRNWPSQPTVFKGHTN 1598
L+ V
Sbjct: 80 LKGRTWKPTLVILRINR 96
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 43.3 bits (100), Expect = 2e-04
Identities = 44/357 (12%), Positives = 91/357 (25%), Gaps = 33/357 (9%)
Query: 1325 AHHGAL----RSVAVGQDECTVFTAGIGPGFKGTVQKWELT--RINCVSGYYGHEEVVND 1378
A+H L A +D + V +E + + V H V
Sbjct: 1 AYHSFLVEPISCHAWNKDRTQIAICP----NNHEVHIYEKSGNKWVQVHELKEHNGQVTG 56
Query: 1379 ICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1436
+ S RI +C D +VW + ++ + K G
Sbjct: 57 VDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS 116
Query: 1437 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496
+ D + + L + S+ + K ++
Sbjct: 117 RVISICY---FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 173
Query: 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWI------------AAGLSSGQCRLFDVRSG 1544
E+ + + + +S W+ A L D
Sbjct: 174 EVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 233
Query: 1545 NVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFS 1604
+A+ + + + + LV++ D ++ + + F G + S
Sbjct: 234 MAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTY--DSAAGKLSFGGRLDVPKQSS 291
Query: 1605 VWGQDVISISNNKIGLSSLSKSADEDGQ----HRLVPQKLYMVDNGAKNLSVLSSIS 1657
G N +S SA H+ ++ ++ G S +
Sbjct: 292 QRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTG 348
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 41.8 bits (96), Expect = 6e-04
Identities = 21/200 (10%), Positives = 55/200 (27%), Gaps = 6/200 (3%)
Query: 1390 SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILST 1449
SCD ++++ ++ A S S + V + + S +
Sbjct: 160 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 219
Query: 1450 AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-WRGEPTELGFPSLVSAIC 1508
+ D + + + L I + + P + S +
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLS 279
Query: 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDH-- 1566
G + + + + + + + H V++++
Sbjct: 280 FGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKA 339
Query: 1567 ---LLVSSSLDKTLRIWDLR 1583
++ +D + IWD+R
Sbjct: 340 KCSQFCTTGMDGGMSIWDVR 359
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 1e-06
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 7/136 (5%)
Query: 234 HPNVAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYL 292
P + + +T L + L L +E V+ + +++ A+ +L
Sbjct: 88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHL 145
Query: 293 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQ 352
H LGI +R + N+LL + + + D L T G
Sbjct: 146 HKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKE--FVADETERAYDFCGTIEYMAPDI 201
Query: 353 GLYADLKLSQSMDWHS 368
D +++DW S
Sbjct: 202 VRGGDSGHDKAVDWWS 217
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (99), Expect = 3e-04
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLAVYLEN------GDLPGVMEELPSHTRILVEACITK 794
D +S+G L+ EL F P +E+ + + L++ + K
Sbjct: 214 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 795 DWTRRPS-----AKSLLESPYF 811
D +R A + E +F
Sbjct: 274 DPKKRLGCGPRDADEIKEHLFF 295
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 49.6 bits (116), Expect = 2e-06
Identities = 17/127 (13%), Positives = 34/127 (26%), Gaps = 1/127 (0%)
Query: 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515
+ + + L + + F + + +
Sbjct: 159 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 218
Query: 1516 QAGGAVASPSWIAAGLSSGQCRLFDVRS-GNVIASWRAHDGYVTKLAAPEDHLLVSSSLD 1574
A +A G ++ V+ +I + AH V L LVSS D
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGAD 278
Query: 1575 KTLRIWD 1581
++ W+
Sbjct: 279 ACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.3 bits (97), Expect = 3e-04
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 10/69 (14%)
Query: 1543 SGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1602
V+ + H+ +T L + L+S S D + W ++ + H+N I
Sbjct: 2 HDEVLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSS-------SMHQDHSNLIVS 51
Query: 1603 FSVWGQDVI 1611
Sbjct: 52 LDNSKAQEY 60
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.9 bits (91), Expect = 0.002
Identities = 31/284 (10%), Positives = 80/284 (28%), Gaps = 27/284 (9%)
Query: 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDI 1379
L +I H+ + ++ V + + + G + +W + S + H ++ +
Sbjct: 6 LKTISGHNKGITALTV----NPLISGS----YDGRIMEWSSS-----SMHQDHSNLIVSL 52
Query: 1380 CVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNS 1439
S + +S + + K + + + G + + + +
Sbjct: 53 DN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTG 111
Query: 1440 NTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1499
+ + V + G I + L +
Sbjct: 112 DII-----------KSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP 160
Query: 1500 FPSLVSAI-CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1558
+ S I + + AG + + + R+ + A
Sbjct: 161 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGA 220
Query: 1559 KLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1602
E+ L+ + SLD + I+ ++R H +G++
Sbjct: 221 NEEEIEEDLVATGSLDTNIFIYSVKRPMKII-KALNAHKDGVNN 263
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.3 bits (117), Expect = 2e-06
Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 8/109 (7%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
K + FL+ E+ V LRH + + ++ + + +L +
Sbjct: 50 KPGTMSPEAFLQ--------EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDF 101
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
L+ + + Q+ S +AY+ + HR + +N+L+ ++
Sbjct: 102 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 150
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.6 bits (110), Expect = 1e-05
Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAEL-HLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 785
+ D++S G LL EL R + + + +E G E P
Sbjct: 185 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 244
Query: 786 ILVEACITKDWTRRPSAKSLLE--SPYFPST 814
L+ C K+ RP+ + L YF ST
Sbjct: 245 DLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (117), Expect = 2e-06
Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 17/104 (16%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALK---------------- 273
H N+ +LG G + Y L N L+ ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317
+ YQ+ +A+L S HR + N+LLT + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI 186
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.8 bits (116), Expect = 2e-06
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 22/130 (16%)
Query: 201 LIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG-------LITSV 253
L + K + E + F E+ + L+HPN+ +++ L+T +
Sbjct: 42 LQDRKLTKSERQRFKE--------EAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 93
Query: 254 IPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD 311
+ TL+ L+ + +R Q+L + +LH+ I HR + N+ +T
Sbjct: 94 MTSG--TLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG 149
Query: 312 SCWSWLYICD 321
S + I D
Sbjct: 150 PTGS-VKIGD 158
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (115), Expect = 3e-06
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 5/76 (6%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS-----LAVYLENGDLPGVMEELPSHTRILVEACITKD 795
D+++ G + E+ + + + ++E CI ++
Sbjct: 194 DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 253
Query: 796 WTRRPSAKSLLESPYF 811
R S K LL +F
Sbjct: 254 KDERYSIKDLLNHAFF 269
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 2e-06
Identities = 23/116 (19%), Positives = 44/116 (37%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E S+ L HPN+ +L ++ T + V L+ + S ++ ++Q
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSP 340
LL +A+ HS + HR + P N+L+ L + + +
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (101), Expect = 2e-04
Identities = 30/139 (21%), Positives = 42/139 (30%), Gaps = 31/139 (22%)
Query: 704 LLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSIS 763
L V L +R + DI+S+GC+ AE+ RR LF S
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 764 LAVYLEN-------------------------------GDLPGVMEELPSHTRILVEACI 792
L D V+ L R L+ +
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 793 TKDWTRRPSAKSLLESPYF 811
D +R SAK+ L P+F
Sbjct: 268 HYDPNKRISAKAALAHPFF 286
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.6 bits (115), Expect = 3e-06
Identities = 21/153 (13%), Positives = 45/153 (29%), Gaps = 23/153 (15%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQ--------------FSPNALKSE 275
HPN+ +LG + G + I P+ L + L+ S + S
Sbjct: 67 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126
Query: 276 WHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCT 335
+ + + YL HR + N+L+ ++ + ++
Sbjct: 127 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV--------AKIADFGLSRGQE 178
Query: 336 IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
+ +G + + + D S
Sbjct: 179 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 211
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 5e-06
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 4/116 (3%)
Query: 696 LSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHL 754
++D L + E + + +L + +T D++S G LL E +
Sbjct: 171 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 230
Query: 755 RRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807
P + ++ + VYL G E P ++ C RPS L+
Sbjct: 231 GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 2e-04
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 225 ESSVPGCLRHPNVAPVLGL-LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 283
E + HPNV +LG+ L++ G V+P + + + +
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 137
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
Q+ + +L S HR + N +L + + + D
Sbjct: 138 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVAD 173
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 5e-06
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
+ S + FL+ E+ HP++ ++G++ + + + T L
Sbjct: 43 CKNCTSDSVREKFLQ--------EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL 94
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314
+ LQ +L + YQL +A+AYL S HR + NVL++ +
Sbjct: 95 RSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC 146
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.4 bits (112), Expect = 6e-06
Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E++V L +P + ++G+ + + + L LQ + + + ++ L++Q
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHV--KDKNIIELVHQ 115
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 343
+ + YL HR + NVLL ++ I D L + +
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAK--ISDFGLSKALRADENYYKAQTHGKW 172
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (108), Expect = 2e-05
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 785
+ D++S G L+ E + + + + LE G+ G P
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY 240
Query: 786 ILVEACITKDWTRRPSAKSL---LESPYF 811
L+ C T D RP ++ L + Y+
Sbjct: 241 DLMNLCWTYDVENRPGFAAVELRLRNYYY 269
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.0 bits (112), Expect = 6e-06
Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 1525 SWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT----KLAAPEDHLLVSSSLDKTLRIW 1580
A + R++DV + + W + + A + ++S SLD TL +
Sbjct: 264 QKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFY 323
Query: 1581 DL 1582
+L
Sbjct: 324 EL 325
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 7e-06
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L HPN+ +L I+ V LE I++ + L H++ M L + Y
Sbjct: 57 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT-PSHIKAYMLMTLQGLEY 115
Query: 292 LHSLGIAHRSVCPSNVLLTDSCW 314
LH I HR + P+N+LL ++
Sbjct: 116 LHQHWILHRDLKPNNLLLDENGV 138
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (105), Expect = 4e-05
Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 30/105 (28%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLF-------------------------DSISLAVYLENG 771
D++++GC+LAEL LR P D SL Y+
Sbjct: 179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238
Query: 772 DLPG-----VMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
PG + L++ + R +A L+ YF
Sbjct: 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 283
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (111), Expect = 8e-06
Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 14/153 (9%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L+H N+ + +L + +++ + S N V+ ++QLL + +
Sbjct: 58 LKHKNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 351
HS + HR + P N+L+ + L +A IP +
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFG--------LARAFGIPVRCYSAEVVTLW-- 166
Query: 352 QGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384
Y + +S W E
Sbjct: 167 ---YRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (97), Expect = 4e-04
Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 32/120 (26%)
Query: 724 WRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSISLAVYLEN------------ 770
+R S D++S GC+ AE + RPLF + L+
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 771 -------------------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
L V+ +L + R L++ + + +R SA+ L+ PYF
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.6 bits (112), Expect = 9e-06
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLI---TSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 288
++H NV +L + + + V T ++ ++ HV+FL+YQ+L
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSW 316
+ Y+HS I HR + PSN+ + + C
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELK 161
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.5 bits (91), Expect = 0.003
Identities = 21/115 (18%), Positives = 33/115 (28%), Gaps = 33/115 (28%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN------------------- 770
+ + DI+S+GC++AEL R LF L+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 771 --------------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+ V L+E + D +R +A L YF
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.2 bits (111), Expect = 9e-06
Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL-----ENILQFSPNALKSEWH-- 277
E + L+H NV ++ + +T + + Y + ++ N L
Sbjct: 59 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 118
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337
++ +M LL+ + Y+H I HR + +NVL+T L + D L S+A
Sbjct: 119 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPN 176
Query: 338 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
+ + L + +D
Sbjct: 177 RYTNRVVTLWYRPPELLLGERDYGPPIDLWG 207
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.6 bits (94), Expect = 0.001
Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 40/132 (30%)
Query: 714 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDS---------ISL 764
++ Y+ L + Y D++ GC++AE+ R P+ IS
Sbjct: 183 VTLWYRPPELLLGERDYGP------PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 236
Query: 765 AVYLENGDLPGVMEELPSHTRI-------------------------LVEACITKDWTRR 799
++ ++ + ++ L++ + D +R
Sbjct: 237 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 296
Query: 800 PSAKSLLESPYF 811
+ L +F
Sbjct: 297 IDSDDALNHDFF 308
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.2 bits (110), Expect = 1e-05
Identities = 43/366 (11%), Positives = 103/366 (28%), Gaps = 69/366 (18%)
Query: 1314 KIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC------VS 1367
K+ + ++ +AH + SV+ + G ++ W+ ++
Sbjct: 1 KVFIATANAGKAHDADIFSVSACNS--FTVSCS----GDGYLKVWDNKLLDNENPKDKSY 54
Query: 1368 GYYGHEEVVNDICVLSSSGR-------IASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH 1418
++ H+ ++ + VL + R +A+ G L + + +D L
Sbjct: 55 SHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLD 114
Query: 1419 GGSPSSSI--------------------SKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1458
S T + + S L+ + L
Sbjct: 115 SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ 174
Query: 1459 LH---------HIECVE-----RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504
V+ + G NG+++ +++ + L+ + + + + + +
Sbjct: 175 GTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234
Query: 1505 SAICACGSEKMQAGGAVASPS-----WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTK 1559
++ + A ++ + S AH +V
Sbjct: 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 294
Query: 1560 LA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG------FSVWGQDVIS 1612
L+ L S+ D LR WD++ + T H + I G +
Sbjct: 295 LSFNDSGETLCSAGWDGKLRFWDVKTK--ERITTLNMHCDDIEIEEDILAVDEHGDSLAE 352
Query: 1613 ISNNKI 1618
+
Sbjct: 353 PGVFDV 358
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.1 bits (102), Expect = 1e-04
Identities = 15/87 (17%), Positives = 29/87 (33%), Gaps = 6/87 (6%)
Query: 1551 RAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQP--TVFKGHTNGISGFSVWGQ 1608
+AHD + ++ + VS S D L++WD + P + + V
Sbjct: 11 KAHDADIFSVS-ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 1609 DVISISNNKIGLSSLSKSADEDGQHRL 1635
I ++ L + + G
Sbjct: 70 QAIERDAFELCLVA---TTSFSGDLLF 93
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.8 bits (91), Expect = 0.002
Identities = 21/189 (11%), Positives = 52/189 (27%), Gaps = 33/189 (17%)
Query: 1523 SPSWIAAGLSSGQCRLFDVRSGNV------IASWRAHDGYVTKLAA--------PEDHLL 1568
S+ + G +++D + + S H + + E L+
Sbjct: 23 CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 82
Query: 1569 VSSSLDKTLRIWDLRRN------WPSQPTVFKGHTNGISGFSV----------WGQDVIS 1612
++S L + + R + + S +++ + V +
Sbjct: 83 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT 142
Query: 1613 ISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSS-ISILPFSR--LFLVGT 1669
+ ADE L + ++ S + + S L G
Sbjct: 143 DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGF 202
Query: 1670 EDGYLRLCC 1678
+G +++
Sbjct: 203 NNGTVQISE 211
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.5 bits (107), Expect = 1e-05
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 3/91 (3%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
N L L+ + + L ++ + ++ +L +A
Sbjct: 58 IRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVA 117
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ GI H + NVL+++ ++I D
Sbjct: 118 KFYHRGIVHGDLSQYNVLVSE---EGIWIID 145
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 1e-05
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 6/81 (7%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN------GDLPGVMEELPSHTRILVEA 790
D++SIG + L F + L N + + +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 791 CITKDWTRRPSAKSLLESPYF 811
+ KD +R + + L+ P+
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWI 274
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 2e-04
Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 5/137 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
++HPNV + + + + ++ +L E + Q+L+ + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFLKQILNGVYY 128
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 351
LHSL IAH + P N++L D I + +A +
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIK----IIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 352 QGLYADLKLSQSMDWHS 368
+ L D S
Sbjct: 185 PEIVNYEPLGLEADMWS 201
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.4 bits (109), Expect = 2e-05
Identities = 25/153 (16%), Positives = 43/153 (28%), Gaps = 20/153 (13%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQF--------------SPNALKSE 275
+H N+ +LG G + ++ L LQ +P S
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 134
Query: 276 WHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCT 335
+ YQ+ + YL S HR + NVL+T+ + + T
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 336 IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
+ +Y + D S
Sbjct: 195 TNGRLPVKWMAPEALFDRIY-----THQSDVWS 222
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (99), Expect = 2e-04
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 741 DIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDW 796
D++S G LL E L + + L L+ G + +++ C
Sbjct: 219 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 278
Query: 797 TRRPSAKSLLE 807
++RP+ K L+E
Sbjct: 279 SQRPTFKQLVE 289
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 46.5 bits (108), Expect = 2e-05
Identities = 31/299 (10%), Positives = 77/299 (25%), Gaps = 38/299 (12%)
Query: 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVV 1376
SI H+ A+ +++ D T+F+A +G + W+++ + H ++
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSAD----AEGHINSWDISTGISNRVFPDVHATMI 58
Query: 1377 NDICVLSSSGRIASCDGTLHVWNSQTGKLL-----------SVFAEQSMDSLHGGSPSSS 1425
I S G + S ++ + + ++
Sbjct: 59 TGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAAC 118
Query: 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485
I G L +S A + + + V + S+ +
Sbjct: 119 YKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178
Query: 1486 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV-------------------ASPSW 1526
F + +
Sbjct: 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR 238
Query: 1527 IAAGLSSGQCRLFDVRSGN---VIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDL 1582
+A G ++++ + +I V + + +VS+ D ++ W++
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.6 bits (103), Expect = 5e-05
Identities = 37/283 (13%), Positives = 78/283 (27%), Gaps = 34/283 (12%)
Query: 1369 YYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAE-----------QSMD 1415
YGH + + + + + S +G ++ W+ TG VF + S
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 67
Query: 1416 SLHGGSPSSSISKINTDQVG----MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1471
L S + + G +N LSS L A + + +
Sbjct: 68 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSH 127
Query: 1472 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1531
+ + L + G S V G+ + V +
Sbjct: 128 GKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAF 187
Query: 1532 SSGQCRLFDVRSGNVIASWRAHDG---------------YVTKLAAPEDHLLVSSSLDKT 1576
S+ L + + + +P++ L + SLD +
Sbjct: 188 SNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 247
Query: 1577 LRIWDLRRNWPSQPTVFKGHTNGISGFSVW--GQDVISISNNK 1617
+ +W++ + + H +W ++S +
Sbjct: 248 VIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDS 290
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.6 bits (103), Expect = 7e-05
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 2/69 (2%)
Query: 1544 GNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1602
G++ H+ +T L+ + + L S+ + + WD+ S H I+G
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDI-STGISNRVFPDVHATMITG 60
Query: 1603 FSVWGQDVI 1611
+ +
Sbjct: 61 IKTTSKGDL 69
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 2e-05
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+ H+ +Q+ + +L S HR + N+LL++
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 171
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.6 bits (106), Expect = 3e-05
Identities = 8/58 (13%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 1545 NVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTV-FKGHTNGI 1600
++ +A Y++ + P LL+ +S D +L ++ + + + + +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPL 59
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.1 bits (97), Expect = 5e-04
Identities = 25/311 (8%), Positives = 80/311 (25%), Gaps = 23/311 (7%)
Query: 1325 AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL---TRINCVSGYYGHEEVVNDICV 1381
A + + + + + + G++ ++ + + ++ +
Sbjct: 9 APKDYISDIKIIPSKSLLLITS----WDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF 64
Query: 1382 LSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNT 1441
+ ++ F + + + G + +
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
Query: 1442 LSSGILSTAFDGNLYTCLHHIECV------------ERLVVGIGNGSLRFIDINQGQKLH 1489
+ L+ RL+VG+ N +++ + + +
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184
Query: 1490 LWRGEPTELGFPSLVSAICACGSEKMQAG--GAVASPSWIAAGLSSGQCRLFDVRSGNVI 1547
E V+ + + G VA + G + F R +
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244
Query: 1548 ASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVW 1606
V + +P L ++ D + W+L+ + K + + + +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIK-NFAKFNEDSVVKIACS 303
Query: 1607 GQDVISISNNK 1617
+ +++
Sbjct: 304 DNILCLATSDD 314
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.2 bits (92), Expect = 0.002
Identities = 38/323 (11%), Positives = 89/323 (27%), Gaps = 30/323 (9%)
Query: 1371 GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428
++ ++DI ++ S + DG+L V+ + SL P +
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ----SLRYKHPLLCCNF 64
Query: 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1488
I+ + + + + L + E + G + I + +
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
Query: 1489 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1548
+ G ++ + K + + S + G+++ Q + F +
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184
Query: 1549 SWRAHDGYVTK-----LAAPEDHLLVSSSLDKTLRIWDLRRNWP-----SQPTVFKGHTN 1598
G + L E SS+D + + + N
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244
Query: 1599 GISGFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAK--NLSVLSSI 1656
+ + I S L + DG + + K N + +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAG----SDGIIS-----CWNLQTRKKIKNFAKFNED 295
Query: 1657 SILPFS---RLFLVGTEDGYLRL 1676
S++ + + + T D +
Sbjct: 296 SVVKIACSDNILCLATSDDTFKT 318
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 45.7 bits (106), Expect = 3e-05
Identities = 32/270 (11%), Positives = 72/270 (26%), Gaps = 9/270 (3%)
Query: 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFA 1410
+V + + Y H S G + +W++
Sbjct: 38 TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT----HI 93
Query: 1411 EQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470
++ + G + ++ + G + G L V
Sbjct: 94 LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVD 153
Query: 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS--AICACGSEKMQAGGAVASPSWIA 1528
+ R I + + ++ G P + + + + A
Sbjct: 154 FKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTI 213
Query: 1529 AGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPS 1588
+ V + + + +P+ + S+S DKT++IW++
Sbjct: 214 VLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 273
Query: 1589 QP-TVFKGHTNGISGFSVWGQDVISISNNK 1617
+ V + G Q ++SIS N
Sbjct: 274 KTIPVGTRIEDQQLGIIWTKQALVSISANG 303
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.5 bits (103), Expect = 8e-05
Identities = 8/60 (13%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 1525 SWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAA--PEDHLLVSSSLDKTLRIWDL 1582
+ IA+ + ++++V + V + + LVS S + + +
Sbjct: 251 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 45.7 bits (107), Expect = 4e-05
Identities = 23/287 (8%), Positives = 64/287 (22%), Gaps = 29/287 (10%)
Query: 1324 RAHHGALRSVAVGQDECTVFTAGIGPG------FKGTVQKWELTRINCVSGYYGHEEVV- 1376
+ L G A V+ ++ ++ +
Sbjct: 61 HSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRF 120
Query: 1377 ------NDICVLSSSGRIASC---DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427
+ I +SS + + + S +H G+ ++
Sbjct: 121 SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYL 180
Query: 1428 KINTD----QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483
+ + + + + + + ++V S+ DI
Sbjct: 181 -GSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIP 239
Query: 1484 QGQKLHLWRGEPTELGFPSLVSAIC----ACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1539
+ E G + + + + ++
Sbjct: 240 AAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299
Query: 1540 DVRSGNVIASWRAHDGYVTKLAAPED---HLLVSSSLDKTLRIWDLR 1583
G ++ + A +D +S+ + L I+D
Sbjct: 300 TASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 44.1 bits (103), Expect = 9e-05
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
S + Q+ + +AYL HR + N L+ ++ + I D
Sbjct: 138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM--VVKIAD 183
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.7 bits (102), Expect = 1e-04
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 785
D+++ G +L E + ++ + Y+ +G++ E P
Sbjct: 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELY 272
Query: 786 ILVEACITKDWTRRPSAKSLLE 807
L+ C +K RPS S+
Sbjct: 273 NLMRLCWSKLPADRPSFCSIHR 294
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 44.0 bits (102), Expect = 1e-04
Identities = 37/330 (11%), Positives = 80/330 (24%), Gaps = 37/330 (11%)
Query: 1287 WFPTPAASWDG-------PDFLGRVGGLKDESPWKIKASILSSIR-AHHGALRSVAVGQD 1338
+ P P + DG F G + + L VG
Sbjct: 48 FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY 107
Query: 1339 ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVW 1398
G T+ ++ + V + + + I
Sbjct: 108 PWMTSLTPDG----KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFM 163
Query: 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1458
+ + G L V + +T+ + ++ A+
Sbjct: 164 HCRDGSLAKV----------AFGTEGTPEITHTEVFHPEDEFLINHP----AYSQKAGRL 209
Query: 1459 LHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAG 1518
+ + + + +G +F+ + G+ A +
Sbjct: 210 VWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA-----DGWRPGGWQQVAYHRALDRIY 264
Query: 1519 GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPED---HLLVSSSLDK 1575
V +S + D ++G +A + + + +D L S+ DK
Sbjct: 265 LLVDQRDEWRHKTASRFVVVLDAKTGERLAKF-EMGHEIDSINVSQDEKPLLYALSTGDK 323
Query: 1576 TLRIWDLRRNWPSQPTVFKGHTNGISGFSV 1605
TL I D + +G +
Sbjct: 324 TLYIHDAESGEELR--SVNQLGHGPQVITT 351
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.7 bits (99), Expect = 3e-04
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
Query: 264 ILQFSPNALKSEWHVRFLMYQLLSAIAYLH-SLGIAHRSVCPSNVLLTDSCWSWLYICDK 322
+++ + +V+ + QLL + Y+H GI H + P NVL+ +
Sbjct: 113 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE----NL 168
Query: 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
+ + + C S + D S
Sbjct: 169 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 214
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 4e-04
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-T 260
+ AS +E FL E+SV +V +LG++ ++
Sbjct: 58 VNEAASMRERIEFLN--------EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 109
Query: 261 LENILQFSPNALK--------SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
L++ L+ A+ S + + ++ +AYL++ HR + N ++ +
Sbjct: 110 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 169
Query: 313 CW 314
Sbjct: 170 FT 171
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 5e-04
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 12/100 (12%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLEN--ILQFSPNALKSEWHVRFLMYQLLSAI 289
LRH N+ + + + E+ + + + + L S +
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGL 113
Query: 290 AYLHS--------LGIAHRSVCPSNVLLTDSCWSWLYICD 321
A+LH IAHR + N+L+ + I D
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIAD 151
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (96), Expect = 7e-04
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 3/130 (2%)
Query: 223 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYT--LENILQFSPNALKSEWHVRF 280
+ E + C+ H N+ +L + + ++ L + +
Sbjct: 64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 123
Query: 281 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT-DSCWSWLYICDKPLVGFNSIADWCTIPTS 339
L+YQ+L I +LHS GI HR + PSN+++ D L G + + +
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 340 PMIGCCIEGC 349
I G
Sbjct: 184 YRAPEVILGM 193
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1678 | |||
| d1t77a1 | 304 | Lipopolysaccharide-responsive and beige-like ancho | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.97 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.96 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.96 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.96 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.95 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.94 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.92 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.91 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.9 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.87 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.86 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.86 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.85 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.84 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.84 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.78 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.75 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.72 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.72 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.72 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.68 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.59 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.53 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.52 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.47 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.39 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.2 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.14 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.12 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.11 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.1 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.08 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.06 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.06 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.05 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.04 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.04 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.03 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.03 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 98.99 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 98.99 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.98 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 98.98 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 98.97 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 98.96 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 98.96 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 98.92 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 98.9 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 98.78 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 98.48 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.47 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 98.46 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.46 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.44 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.42 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.39 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.32 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.2 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.19 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.14 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.02 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.92 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.85 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.44 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.42 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.32 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.31 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.24 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.05 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 96.76 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.4 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 95.85 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 95.81 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 95.77 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.48 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 95.27 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 94.99 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 94.73 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 94.5 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 94.46 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.37 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.11 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.56 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 92.62 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 91.54 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 90.7 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 89.88 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 87.65 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 82.84 |
| >d1t77a1 a.169.1.1 (A:2186-2489) Lipopolysaccharide-responsive and beige-like anchor protein LRBA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: BEACH domain superfamily: BEACH domain family: BEACH domain domain: Lipopolysaccharide-responsive and beige-like anchor protein LRBA species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=530.18 Aligned_cols=236 Identities=33% Similarity=0.564 Sum_probs=206.4
Q ss_pred CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEE-CCCCC-CCCCCCCCCCCCCCCHHHHCCCCCC-HHCCC
Q ss_conf 222222334765204667652025699999986784234673-07999-9998998685687114311245210-00002
Q 000316 367 HSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQ-LDFTY 443 (1678)
Q Consensus 367 ~~~~d~W~~G~isnfeyl~~ln~~agrs~~dl~~ypv~pwv~-d~~~~-~~~~~~~~~rdLsk~~~~~~~~~~~-~~~~~ 443 (1678)
...+.+|..|+||||||||.||.++||+|+|++||||||||+ ||.++ .|++++..||||+||||++++.+.+ +...|
T Consensus 24 ~~~t~kW~~g~iSNfeYLm~LN~~sGRSf~D~~qYPIfPWVi~dy~s~~ldl~~~~~~RDLskpig~l~~~r~~~~~~~~ 103 (304)
T d1t77a1 24 SNMTQRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERY 103 (304)
T ss_dssp CSHHHHHHTTSSCHHHHHHHHHHHHTCCSSCGGGCCCBCCCBCCCSSSSCCTTCGGGBCCTTSCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHH
T ss_conf 01999987579758999999999718888873327636745226776422456865512699822005988999999998
Q ss_pred ----CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCC--CCCCCCCCHHHHHHC------CCCCCCCCCCCCCC
Q ss_conf ----789989655855667532354101348646899874125--699995106877313------98863245665588
Q 000316 444 ----SSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLYQ------WTPDECIPEFYCDP 511 (1678)
Q Consensus 444 ----~~~~~~~h~~~~~~~~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~~------~~~~EliPef~~~p 511 (1678)
.....++||+++|++++.|++||+|++||+.+++.++++ ..+++.+.++.+.+. .+++|||||||++|
T Consensus 104 ~~~~~~~~~~~~y~s~yS~~~~V~~~L~R~ePft~l~~~lq~g~fD~~~R~F~si~~~~~~~~~~~~d~~EliPEFf~~P 183 (304)
T d1t77a1 104 ESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLP 183 (304)
T ss_dssp HHCCCSSSCCCSBSSCSCCHHHHHHHHTTSTTHHHHHHHHHTSSCCCTTTSCCBHHHHHHHHHHCTTCCCCBCGGGGTCG
T ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCHHHCCH
T ss_conf 72124789876557777771689988833785368989861686668753503599999986156554100484230275
Q ss_pred CCCCCCC----------CCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf 4453499----------999972049999998899999998424468875488840010234878344671499899899
Q 000316 512 QIFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSS 581 (1678)
Q Consensus 512 ~~f~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDlifG~k~~g~~a~~~~nv~~~~~ 581 (1678)
|+|+|.| ..|+||+||+||++|++||++||+||||++||++||+||||||||||+|++|++|+|||+|.+
T Consensus 184 e~f~n~n~~~~g~~~~g~~v~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLiFG~kq~G~~A~~a~Nvf~p~~ 263 (304)
T d1t77a1 184 EMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLT 263 (304)
T ss_dssp GGGSCTTCCCCCBCTTSCBCSSCBCCTTCSSHHHHHHHHHHHHHSHHHHTTHHHHHHHHTSTTSSHHHHHHHTCCBCGGG
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCC
T ss_conf 76520145543535688865654168766881999999999970437776766667764010357888897346455545
Q ss_pred CCCC------------------CCCCC--CCCCCCCCCCCC
Q ss_conf 9986------------------54667--674467888899
Q 000316 582 EPTK------------------PKSVG--RLQLFTQPHPVR 602 (1678)
Q Consensus 582 ~~~~------------------~~~~g--~~qlf~~pHp~r 602 (1678)
++.. .+.+| |.|||++|||+|
T Consensus 264 Y~~~~~~~~~~d~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 304 (304)
T d1t77a1 264 YEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 304 (304)
T ss_dssp STTSCCGGGCCSHHHHHHHHHHHHHHCCCCCCCCSSCCCCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
T ss_conf 46645510258989999999999977998134228999898
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=0 Score=352.26 Aligned_cols=174 Identities=11% Similarity=0.107 Sum_probs=141.9
Q ss_pred CCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 33789667633543272799999963777745562099999821577672778999985089935588851028987613
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV 238 (1678)
..+++|++++.||+|+||+||+|+++ .++..||+|++.... ......+. +|+.+|+.++|||||
T Consensus 23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~------~~g~~vAvK~i~~~~--~~~~~~~~--------~E~~il~~l~HpnIv 86 (350)
T d1koaa2 23 HVLDHYDIHEELGTGAFGVVHRVTER------ATGNNFAAKFVMTPH--ESDKETVR--------KEIQTMSVLRHPTLV 86 (350)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEET------TTTEEEEEEEECCCS--HHHHHHHH--------HHHHHHHHTCCTTBC
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCC--HHHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 78657589889840768199999988------999899999984524--31699999--------999999867997999
Q ss_pred CEEEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 33169993896778513899-99888986199998879999999999999999989489220689989737557994159
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~i 317 (1678)
++++++.+.+.+|+|||||+ |+|.+++.. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.+....+
T Consensus 87 ~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~v 165 (350)
T d1koaa2 87 NLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 165 (350)
T ss_dssp CEEEEEEETTEEEEEECCCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCE
T ss_pred CEEEEEEECCEEEEEEECCCCCCHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEE
T ss_conf 299999989999999985799889999976-2378999999999999999999997569760001546736416889869
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 99726885447888864466888842000244567642100012
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 318 KI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
||+|||+|+....... .....||+.|||||++
T Consensus 166 kL~DFG~a~~~~~~~~------------~~~~~gT~~Y~aPEv~ 197 (350)
T d1koaa2 166 KLIDFGLTAHLDPKQS------------VKVTTGTAEFAAPEVA 197 (350)
T ss_dssp EECCCTTCEECCTTSC------------EEEECSCTTTCCHHHH
T ss_pred EEEECCHHEECCCCCC------------CCEECCCCCCCCHHHH
T ss_conf 9954521044256543------------2000686242188997
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=356.70 Aligned_cols=173 Identities=18% Similarity=0.201 Sum_probs=144.0
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|+++ .++..||+|.+..... .....++. +|+.+|+.++|||||++
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~-~~~~~~~~--------~Ei~~l~~l~HpnIv~~ 68 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRA-VDCPENIK--------KEICINKMLNHENVVKF 68 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECC--------CHH--------HHHHHHHTCCCTTBCCE
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHC-CHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 746089989721748099999999------9997999999845664-12799999--------99999985799888469
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++.+++.+|+|||||+| +|.++++ ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 69 ~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~--~~KL 144 (271)
T d1nvra_ 69 YGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 144 (271)
T ss_dssp EEEEEETTEEEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--CEEE
T ss_pred EEEECCCCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 654046743679886458980899975--379999999999999999999999975983575468997887899--8798
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+......... ......||+.|||||++
T Consensus 145 ~DFG~a~~~~~~~~~~---------~~~~~~GT~~Y~APE~~ 177 (271)
T d1nvra_ 145 SDFGLATVFRYNNRER---------LLNKMCGTLPYVAPELL 177 (271)
T ss_dssp CCCTTCEECEETTEEC---------CBCCCCSCGGGSCTHHH
T ss_pred CCCHHHEEECCCCCCC---------CCCCEEECCCCCCHHHH
T ss_conf 3231422404688653---------11132557474287286
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=355.82 Aligned_cols=172 Identities=17% Similarity=0.144 Sum_probs=144.7
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHH-HHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 78966763354327279999996377774556209999982157767277-89999850899355888510289876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
+++|++++.||+|+||.||+|+++ .++..||+|++.+....... ..+++ +|+.+|+.++|||||+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~------~~~~~~AiK~i~k~~~~~~~~~~~~~--------~E~~il~~l~hp~Iv~ 69 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTA 69 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHSCCCTTBCC
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 474289889831768499999998------99989999998156544979999999--------9999998679998877
Q ss_pred EEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 31699938967785138999-98889861999988799999999999999999894892206899897375579941599
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
++++|++.+.+|+|||||+| +|.+++. +.+.+++..+++++.||+.||.|||+++|+||||||+|||++.+| ++|
T Consensus 70 l~~~~~~~~~~~iv~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g--~vk 145 (337)
T d1o6la_ 70 LKYAFQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIK 145 (337)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEE
T ss_pred EEEEECCCCCCCCCEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEE
T ss_conf 8764035642111000357986055553--256775999999999996521134315962246477784765899--888
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 9726885447888864466888842000244567642100012
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 319 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
|+|||+|+........ . ....||+.|+|||++
T Consensus 146 l~DFG~a~~~~~~~~~-----~------~~~~GT~~Y~aPE~~ 177 (337)
T d1o6la_ 146 ITDFGLCKEGISDGAT-----M------KTFCGTPEYLAPEVL 177 (337)
T ss_dssp ECCCTTCBCSCCTTCC-----B------CCCEECGGGCCGGGG
T ss_pred EEECCCCCCCCCCCCC-----C------CCCEECHHHHHHHHC
T ss_conf 8205652003567862-----0------551008899666650
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=0 Score=345.86 Aligned_cols=151 Identities=13% Similarity=0.100 Sum_probs=131.5
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||+||+|+++ .++..||+|.+.... ......+. +|+.+|+.++|||||+
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~--~~~~~~~~--------~Ei~il~~l~HpnIv~ 90 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEK------ATGRVFVAKFINTPY--PLDKYTVK--------NEISIMNQLHHPKLIN 90 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECCS--HHHHHHHH--------HHHHHHTTCCSTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCC--HHHHHHHH--------HHHHHHHHCCCCCCCC
T ss_conf 5403599899931778299999998------999799999988726--46799999--------9999998679979891
Q ss_pred EEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC--CCCCEE
Q ss_conf 31699938967785138999-988898619999887999999999999999998948922068998973755--799415
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT--DSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~--~~g~~~ 316 (1678)
++++|.+++.+|+|||||+| +|.+.+. .....+++..++.++.||+.||.|||++||+||||||+|||++ .++ .
T Consensus 91 ~~~~~~~~~~~~ivmE~~~gg~L~~~~~-~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~--~ 167 (352)
T d1koba_ 91 LHDAFEDKYEMVLILEFLSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS--S 167 (352)
T ss_dssp EEEEEECSSEEEEEEECCCCCBHHHHTT-CTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCC--C
T ss_pred EEEEEEECCEEEEEEECCCCCHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCC--E
T ss_conf 9999998999999998289980888898-638998999999999999999999997792651314455311346788--4
Q ss_pred EEEEECCCCCCCC
Q ss_conf 9997268854478
Q 000316 317 LYICDKPLVGFNS 329 (1678)
Q Consensus 317 iKI~DFGlar~~~ 329 (1678)
+||+|||+|+...
T Consensus 168 vkL~DFGla~~~~ 180 (352)
T d1koba_ 168 VKIIDFGLATKLN 180 (352)
T ss_dssp EEECCCTTCEECC
T ss_pred EEEEECCCCEECC
T ss_conf 8995256303437
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=355.32 Aligned_cols=195 Identities=16% Similarity=0.196 Sum_probs=165.5
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||+||+|+++ .++..||+|.++... ......++. +|+.+|+.++|||||++
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~-~~~~~~~~~--------~Ei~il~~l~HpnIv~l 69 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHK------PSGLVMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 69 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEET------TTTEEEEEEEEECCC-CTTHHHHHH--------HHGGGGGGCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHH-CHHHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 568889789712778099999998------999699999987540-978999999--------99999986799999949
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 1699938967785138999-98889861999988799999999999999999894-892206899897375579941599
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
+++|.+++.+|+|||||+| +|.+++. +.+.+++..++.++.|++.||.|||+ ++|+||||||+|||++.+| .+|
T Consensus 70 ~~~~~~~~~~~iVmEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~--~vk 145 (322)
T d1s9ja_ 70 YGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 145 (322)
T ss_dssp EEEEECSSEEEEEEECCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC--CEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEE
T ss_conf 999998999999997679986899874--2499999999999999999999999859997144577994687899--899
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 9726885447888864466888842000244567642100012233332222223347652046676520256999
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 319 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~~~~~~~d~W~~G~isnfeyl~~ln~~agrs 394 (1678)
|+|||+|+..... . .....||+.|+|||++.+..|+..+|+|+.|++ .+.++.|+.
T Consensus 146 l~DFGla~~~~~~-------~------~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvi-------l~ell~G~~ 201 (322)
T d1s9ja_ 146 LCDFGVSGQLIDS-------M------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS-------LVEMAVGRY 201 (322)
T ss_dssp ECCCCCCHHHHHH-------T------C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHH-------HHHHHHSSC
T ss_pred EEECCCCCCCCCC-------C------CCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHH-------HHHHHHCCC
T ss_conf 9548776256788-------6------211137714119468758998948889989999-------999998889
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=352.32 Aligned_cols=172 Identities=19% Similarity=0.193 Sum_probs=143.6
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
.+++|++++.||+|+||+||+|+++ .++..||+|.+.+.........+.+. +|+.+|+.++|||||+
T Consensus 4 ~l~dy~i~~~iG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~-------~E~~il~~l~hpnIv~ 70 (263)
T d2j4za1 4 ALEDFEIGRPLGKGKFGNVYLAREK------QSKFILALKVLFKAQLEKAGVEHQLR-------REVEIQSHLRHPNILR 70 (263)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH-------HHHHHHHTCCCTTBCC
T ss_pred CHHHEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH-------HHHHHHHHCCCCCCCE
T ss_conf 1537699889851778589999998------99949999998168856768999999-------9999998568888885
Q ss_pred EEEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 3169993896778513899-998889861999988799999999999999999894892206899897375579941599
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
+++++.+++.+|+|||||+ |+|.+++. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+|
T Consensus 71 ~~~~~~~~~~~~ivmEy~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~--~~k 146 (263)
T d2j4za1 71 LYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELK 146 (263)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEE
T ss_pred EEEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCC--CEE
T ss_conf 9999998999899985047985898875--048999999999999999999999988946522023441466899--871
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 9726885447888864466888842000244567642100012
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 319 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
|+|||+|+...... .....||+.|||||++
T Consensus 147 l~DFG~a~~~~~~~-------------~~~~~Gt~~Y~APE~~ 176 (263)
T d2j4za1 147 IADFGWSVHAPSSR-------------RTTLCGTLDYLPPEMI 176 (263)
T ss_dssp ECCCCSCSCCCCCC-------------CEETTEEGGGCCHHHH
T ss_pred ECCCCEEEECCCCC-------------CCCCCCCCCCCCHHHH
T ss_conf 15556335448885-------------2355788763499997
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=348.38 Aligned_cols=169 Identities=12% Similarity=0.062 Sum_probs=140.9
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||+||+|+++ .++..||+|.+....... ...+. +|+.+|+.++|||||++
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~------~~~~~vAvK~~~~~~~~~--~~~~~--------~E~~il~~l~HpnIv~~ 82 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQPK--KELII--------NEILVMRENKNPNIVNY 82 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBT------TTCCEEEEEEEEGGGCSC--HHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEEECCCCHH--HHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 105388789812858299999998------999899999984301727--99999--------99999986799988058
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
+++|.+++.+|+|||||+| +|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.+| .+||
T Consensus 83 ~~~~~~~~~~~ivmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--~vkl 157 (293)
T d1yhwa1 83 LDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 157 (293)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEEECCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 5779889998999970379808988641---5999999999999999999999987972267768886887899--6864
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+........ .....||+.|+|||++
T Consensus 158 ~DFG~a~~~~~~~~~-----------~~~~~gt~~Y~aPE~~ 188 (293)
T d1yhwa1 158 TDFGFCAQITPEQSK-----------RSTMVGTPYWMAPEVV 188 (293)
T ss_dssp CCCTTCEECCSTTCC-----------BCCCCSCGGGCCHHHH
T ss_pred CCCHHHEEECCCCCC-----------CCCCCCCCCCCCHHHH
T ss_conf 251564132136664-----------4444447773682664
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=346.57 Aligned_cols=174 Identities=15% Similarity=0.100 Sum_probs=141.7
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHH-HHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 3789667633543272799999963777745562099999821577672778-999985089935588851028987613
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~-~~~l~~~~~~al~Ei~iL~~l~HpNIV 238 (1678)
.+++|++++.||+|+||.||+|++. .++..||+|.+.+........ ..+++.. +|+.+++.++|||||
T Consensus 2 slddy~i~~~lG~G~fg~Vy~~~~~------~t~~~vAiK~i~~~~~~~~~~~~~~~~e~-----~~~~~l~~~~hpnIv 70 (364)
T d1omwa3 2 TMNDFSVHRIIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNER-----IMLSLVSTGDCPFIV 70 (364)
T ss_dssp CSTTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHHTCHHHHHHHH-----HHHHHHSSSCCTTBC
T ss_pred CHHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHHHHHH-----HHHHHHHCCCCCCEE
T ss_conf 7776851018842889099999999------99979999998458754266799999999-----999998508998588
Q ss_pred CEEEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 33169993896778513899-99888986199998879999999999999999989489220689989737557994159
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~i 317 (1678)
+++++|.+.+.+|+|||||+ |+|.+++. ....+++..++.++.||+.||.|||+++|+||||||+|||++.+| .+
T Consensus 71 ~l~~~~~~~~~~~ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g--~i 146 (364)
T d1omwa3 71 CMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HV 146 (364)
T ss_dssp CEEEEEECSSEEEEEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS--CE
T ss_pred EEEEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCC--CE
T ss_conf 99999998998899999148983899987--325532789999999999999999977962204442216785889--67
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 99726885447888864466888842000244567642100012
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 318 KI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
||+|||+|+...... .. ...||+.|+|||++
T Consensus 147 Kl~DFGla~~~~~~~-------~~------~~~GT~~y~APE~~ 177 (364)
T d1omwa3 147 RISDLGLACDFSKKK-------PH------ASVGTHGYMAPEVL 177 (364)
T ss_dssp EECCCTTCEECSSSC-------CC------SCCSCGGGCCHHHH
T ss_pred EEEEECEEEECCCCC-------CC------CCCCCCCCCHHHHH
T ss_conf 982201023337886-------43------31134554216876
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-45 Score=344.23 Aligned_cols=168 Identities=16% Similarity=0.134 Sum_probs=142.4
Q ss_pred CCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHH-HHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 89667633543272799999963777745562099999821577672778-99998508993558885102898761333
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~-~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
..|+.+++||+|+||+||+|++. .++..||+|.+.......... .++. +|+.+|+.++|||||++
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~--------~Ei~il~~l~HpnIv~~ 80 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQY 80 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEECCSSCHHHHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred HHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 85676279701888099999998------99939999998444435889999999--------99999997789998238
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++.+++.+|+|||||+| +|..++. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 81 ~~~~~~~~~~~iv~E~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--~~Kl 156 (309)
T d1u5ra_ 81 RGCYLREHTAWLVMEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156 (309)
T ss_dssp EEEEEETTEEEEEEECCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT--EEEE
T ss_pred EEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCC--CEEE
T ss_conf 999998998899998069994578997--379999999999999999999999868976667884217987999--7898
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 7268854478888644668888420002445676421000122
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~ 362 (1678)
+|||+|+..... ....||+.|||||++.
T Consensus 157 ~DFG~a~~~~~~---------------~~~~GT~~Y~APE~~~ 184 (309)
T d1u5ra_ 157 GDFGSASIMAPA---------------NSFVGTPYWMAPEVIL 184 (309)
T ss_dssp CCCTTCBSSSSB---------------CCCCSCGGGCCHHHHT
T ss_pred EECCCCCCCCCC---------------CCCCCCCCCCCHHHHH
T ss_conf 443653346778---------------7313476636889983
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=346.47 Aligned_cols=171 Identities=16% Similarity=0.161 Sum_probs=142.0
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|++++.||+|+||+||+|+++ .++..||+|.+.... .....++. +|+++|+.++|||||++
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~--~~~~~~~~--------~E~~il~~l~HpnIv~l 74 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNK------ETSVLAAAKVIDTKS--EEELEDYM--------VEIDILASCDHPNIVKL 74 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECSS--SGGGGGTH--------HHHHHHHHCCCTTBCCE
T ss_pred CCCEEEEEEEEECCCCEEEEEEEC------CCCEEEEEEEECCCC--HHHHHHHH--------HHHHHHHHCCCCCCCEE
T ss_conf 037598479930778199999999------999399999987289--99999999--------99999986799998849
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++.+++.+|+|||||+| +|.+++.. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~~~~~~lvmEy~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~--~~Kl 151 (288)
T d2jfla1 75 LDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG--DIKL 151 (288)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECCCC--CEEE
T ss_conf 8898009958999962799818899986-289999999999999999999999988988714070031487899--9899
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+....... ......||+.|+|||++
T Consensus 152 ~DFG~a~~~~~~~~-----------~~~~~~Gt~~y~APE~l 182 (288)
T d2jfla1 152 ADFGVSAKNTRTIQ-----------RRDSFIGTPYWMAPEVV 182 (288)
T ss_dssp CCCTTCEECHHHHH-----------HHTCCCSCCTTCCHHHH
T ss_pred EECHHHHCCCCCCC-----------CCCCCCCCCCCCCHHHH
T ss_conf 71612303577864-----------10010256264799998
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=348.90 Aligned_cols=184 Identities=20% Similarity=0.247 Sum_probs=142.4
Q ss_pred EEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHH---HHHHHHHCCCCCHHHHHHHCCCCCCCCCCEE
Q ss_conf 6763354327279999996377774556209999982157767277---8999985089935588851028987613331
Q 000316 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 165 ~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~---~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l~ 241 (1678)
+.+++||+|+||+||+|+++ .++..||+|+++........ ...++ +|+.+|+.++|||||+++
T Consensus 1 E~l~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~~~--------~Ei~il~~l~hpnIv~~~ 66 (299)
T d1ua2a_ 1 EKLDFLGEGQFATVYKARDK------NTNQIVAIKKIKLGHRSEAKDGINRTAL--------REIKLLQELSHPNIIGLL 66 (299)
T ss_dssp CEEEEEEEETTEEEEEEECS------SCCSEEEEEEC------------CTHHH--------HHHHHHHHCCCTTBCCEE
T ss_pred CCCEEECCCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHHHHHHHHHHH--------HHHHHHHHCCCCCEEEEE
T ss_conf 95638512728299999999------9996999999842021245679999999--------999999867999986898
Q ss_pred EEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEE
Q ss_conf 69993896778513899998889861999988799999999999999999894892206899897375579941599972
Q 000316 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 242 ~~~~~~~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI~D 321 (1678)
+++.+++.+|+||||+.|++...+. .....+++..++.+++||+.||+|||+++|+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~ivmE~~~~~~~~~~~-~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~--~~KL~D 143 (299)
T d1ua2a_ 67 DAFGHKSNISLVFDFMETDLEVIIK-DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLAD 143 (299)
T ss_dssp EEECCTTCCEEEEECCSEEHHHHHT-TCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECC
T ss_pred EEECCCCCEEEHHHHHCCHHHHHHH-HCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCC--CCCCCC
T ss_conf 5422587402204553450776554-1266778999999999999999886316355035776258853778--411465
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 688544788886446688884200024456764210001223-3332222223347
Q 000316 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRG 376 (1678)
Q Consensus 322 FGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~-~~~~~~~d~W~~G 376 (1678)
||+|+........ .....||+.|+|||++.. ..|+.++|+|+.|
T Consensus 144 FG~a~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG 188 (299)
T d1ua2a_ 144 FGLAKSFGSPNRA-----------YTHQVVTRWYRAPELLFGARMYGVGVDMWAVG 188 (299)
T ss_dssp CGGGSTTTSCCCC-----------CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCC-----------CCCEECCHHHCCHHHHCCCCCCCHHHHHHHCC
T ss_conf 7610005787554-----------33020473336399972677888056436304
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=346.17 Aligned_cols=169 Identities=17% Similarity=0.149 Sum_probs=143.2
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHH-HHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 78966763354327279999996377774556209999982157767277-89999850899355888510289876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
+++|++++.||+|+||.||+|+++ .++..||+|.+.+....... ...++ +|+.+|+.++|||||+
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~------~~g~~~AvK~i~~~~~~~~~~~~~~~--------~E~~il~~l~hpnIv~ 105 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHK------ESGNHYAMKILDKQKVVKLKQIEHTL--------NEKRILQAVNFPFLVK 105 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHTTCCCTTBCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 237089889611768089999998------99989999998267745889999999--------9999999748772740
Q ss_pred EEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 31699938967785138999-98889861999988799999999999999999894892206899897375579941599
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
+++++.+...+|+||||+.| +|..++. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.+| .+|
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~g~l~~~l~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g--~ik 181 (350)
T d1rdqe_ 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181 (350)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCCCC--CEE
T ss_conf 3444432222232222334662266675--158989999999999999989999859986176799993607789--788
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 9726885447888864466888842000244567642100012
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 319 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
|+|||+|+...... . ...||+.|||||++
T Consensus 182 L~DFG~a~~~~~~~--------~------~~~Gt~~Y~APE~~ 210 (350)
T d1rdqe_ 182 VTDFGFAKRVKGRT--------W------TLCGTPEALAPEII 210 (350)
T ss_dssp ECCCTTCEECSSCB--------C------CCEECGGGCCHHHH
T ss_pred EEECEEEEECCCCC--------C------CCCCCCCCCCHHHH
T ss_conf 61010333225666--------4------33676356788997
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=348.69 Aligned_cols=175 Identities=18% Similarity=0.160 Sum_probs=143.3
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|+++ .++..||+|.+.+.........+.+. +|+.+|+.++|||||++
T Consensus 7 p~dy~i~~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~-------~E~~il~~l~HpnIv~l 73 (288)
T d1uu3a_ 7 PEDFKFGKILGEGSFSTVVLAREL------ATSREYAIKILEKRHIIKENKVPYVT-------RERDVMSRLDHPFFVKL 73 (288)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH-------HHHHHHHHCCSTTBCCE
T ss_pred CCCCEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH-------HHHHHHHHCCCCCEEEE
T ss_conf 987789889850879099999998------99979999998657755777899999-------99999987688886179
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
+++|.+++.+|+|||||+| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 74 ~~~~~~~~~~~ivmEy~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~--~vkl 149 (288)
T d1uu3a_ 74 YFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQI 149 (288)
T ss_dssp EEEEECSSEEEEEECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC--EEEE
T ss_conf 999998998899997048987777653--159999999999999999999762165088476774123668885--3886
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+......... ......||+.|+|||++
T Consensus 150 ~DFG~a~~~~~~~~~~---------~~~~~~GT~~Y~APE~~ 182 (288)
T d1uu3a_ 150 TDFGTAKVLSPESKQA---------RANSFVGTAQYVSPELL 182 (288)
T ss_dssp CCCTTCEECC-------------------CCCCGGGCCHHHH
T ss_pred CCCCCCEECCCCCCCC---------CCCCCCCCCCCCCCEEE
T ss_conf 0321024225677643---------33555677552584400
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.4e-45 Score=343.87 Aligned_cols=170 Identities=18% Similarity=0.267 Sum_probs=140.4
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|+++ .++..||+|.+.+..... ....+. +|+.+|+.++|||||++
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~-~~~~~~--------~Ei~il~~l~HpnIv~l 72 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDK------RTQKLVAIKCIAKKALEG-KEGSME--------NEIAVLHKIKHPNIVAL 72 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEET------TTCCEEEEEEEEC-----------C--------HHHHHHHTCCCTTBCCE
T ss_pred CCCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECHHHHHH-HHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 666699889940658399999999------999899999981577312-899999--------99999986799899919
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEC---CCCCEE
Q ss_conf 169993896778513899-9988898619999887999999999999999998948922068998973755---799415
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT---DSCWSW 316 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~---~~g~~~ 316 (1678)
++++.+++.+|+|||||+ |+|.+++. ..+.+++..++.++.||+.||.|||+++|+||||||+|||+. .++ .
T Consensus 73 ~~~~~~~~~~~lvmE~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~--~ 148 (307)
T d1a06a_ 73 DDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS--K 148 (307)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTC--C
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCC--E
T ss_conf 899998998889885268984888653--036788789999999999998752413055687046300110468882--4
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 999726885447888864466888842000244567642100012
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 317 iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+||+|||+|+...... . .....||+.|||||++
T Consensus 149 vkl~DFG~a~~~~~~~------~------~~~~~GT~~y~APE~~ 181 (307)
T d1a06a_ 149 IMISDFGLSKMEDPGS------V------LSTACGTPGYVAPEVL 181 (307)
T ss_dssp EEECCC------------------------------CTTSCHHHH
T ss_pred EEEECCCEEEECCCCC------E------EEEEEECCCCCCCHHH
T ss_conf 9983154358725897------0------4400328422591887
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=342.24 Aligned_cols=153 Identities=19% Similarity=0.223 Sum_probs=135.7
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
+++|++++.||+|+||+||+|++. .++..||+|++...........++. +|+++|+.++|||||++
T Consensus 1 ~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~Ei~il~~l~Hp~Iv~~ 66 (298)
T d1gz8a_ 1 MENFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKL 66 (298)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEEC-------CCHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCCEECCEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 999776517723768099999999------9997999999802225758999999--------99999986799838874
Q ss_pred EEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEE
Q ss_conf 16999389677851389999888986199998879999999999999999989489220689989737557994159997
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI~ 320 (1678)
+++|.+++.+|+||||+.+++..++.......+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~--~~kl~ 144 (298)
T d1gz8a_ 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLA 144 (298)
T ss_dssp EEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEEC
T ss_pred CCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCC--CCEEC
T ss_conf 4533224320378862377445554420256888899999999999999986528899213571140113467--62103
Q ss_pred ECCCCCCCC
Q ss_conf 268854478
Q 000316 321 DKPLVGFNS 329 (1678)
Q Consensus 321 DFGlar~~~ 329 (1678)
|||+|+...
T Consensus 145 DFG~a~~~~ 153 (298)
T d1gz8a_ 145 DFGLARAFG 153 (298)
T ss_dssp STTHHHHHC
T ss_pred CCCCCEECC
T ss_conf 578613436
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.8e-45 Score=341.90 Aligned_cols=169 Identities=16% Similarity=0.182 Sum_probs=142.9
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHH-HHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 78966763354327279999996377774556209999982157767277-89999850899355888510289876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
+++|++++.||+|+||+||+|+++ .++..||+|++.+....... ...+. +|+.+|+.++|||||+
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~------~~g~~vAvK~i~~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~ 68 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSR------HNGRYYAMKVLKKEIVVRLKQVEHTN--------DERLMLSIVTHPFIIR 68 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHSCCBTTBCC
T ss_pred HHHEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCHHH
T ss_conf 547088889720768089999998------99979999998457754889999999--------9999998636967533
Q ss_pred EEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 31699938967785138999-98889861999988799999999999999999894892206899897375579941599
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
+++++.+++.+|+|||||+| +|..++. ....+++..++.++.||+.||.|||+++|+||||||+|||++.+| .+|
T Consensus 69 ~~~~~~~~~~~~ivmE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g--~vk 144 (316)
T d1fota_ 69 MWGTFQDAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG--HIK 144 (316)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS--CEE
T ss_pred EEEEEEECCEEEEEEEECCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECCCC--CEE
T ss_conf 0356852880056765037863223432--222111007999999998765541247677055681050386899--889
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 9726885447888864466888842000244567642100012
Q 000316 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 319 I~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
|+|||+|+...... . ...||+.|||||++
T Consensus 145 L~DFG~a~~~~~~~--------~------~~~Gt~~Y~APE~l 173 (316)
T d1fota_ 145 ITDFGFAKYVPDVT--------Y------TLCGTPDYIAPEVV 173 (316)
T ss_dssp ECCCSSCEECSSCB--------C------CCCSCTTTCCHHHH
T ss_pred EECCCCCEEECCCC--------C------CCCCCCCCCCHHHH
T ss_conf 83175216712456--------4------34576343599998
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-45 Score=337.96 Aligned_cols=156 Identities=17% Similarity=0.205 Sum_probs=134.4
Q ss_pred CCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHH----HHHHHHHHCCCCCHHHHHHHCCCC
Q ss_conf 4337896676335432727999999637777455620999998215776727----789999850899355888510289
Q 000316 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ----ESKNFLRLIGVPSFDESSVPGCLR 233 (1678)
Q Consensus 158 ~~~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~----~~~~~l~~~~~~al~Ei~iL~~l~ 233 (1678)
....++|++++.||+|+||+||+|+++ .++..||+|.+.+...... ....+. +|+.+|+.++
T Consensus 6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~~AvK~i~~~~~~~~~~~~~~~~~~--------~E~~il~~l~ 71 (293)
T d1jksa_ 6 ENVDDYYDTGEELGSGQFAVVKKCREK------STGLQYAAKFIKKRRTKSSRRGVSREDIE--------REVSILKEIQ 71 (293)
T ss_dssp SCGGGTEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEBCSSTTCSSSBCHHHHH--------HHHHHHHHCC
T ss_pred CCCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHHHHHH--------HHHHHHHHCC
T ss_conf 885567798279811789599999999------99989999998756632134068999999--------9999998679
Q ss_pred CCCCCCEEEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC
Q ss_conf 8761333169993896778513899-998889861999988799999999999999999894892206899897375579
Q 000316 234 HPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1678)
Q Consensus 234 HpNIV~l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~ 312 (1678)
|||||+++++|.+.+.+|+|||||+ |+|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.+
T Consensus 72 HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~--~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~ 149 (293)
T d1jksa_ 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149 (293)
T ss_dssp CTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS
T ss_pred CCCCCCEEEEEEECCEEEEEEECCCCCCCCCHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECC
T ss_conf 9899938899997998999998677864310010--35642155789999999999876662542211333012798258
Q ss_pred CC--EEEEEEECCCCCCCC
Q ss_conf 94--159997268854478
Q 000316 313 CW--SWLYICDKPLVGFNS 329 (1678)
Q Consensus 313 g~--~~iKI~DFGlar~~~ 329 (1678)
+. ..+||+|||+|+...
T Consensus 150 ~~~~~~vkl~DfG~a~~~~ 168 (293)
T d1jksa_ 150 NVPKPRIKIIDFGLAHKID 168 (293)
T ss_dssp SSSSCCEEECCCTTCEECT
T ss_pred CCCCCCEEECCHHHHHHCC
T ss_conf 9866646964334421057
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-44 Score=335.61 Aligned_cols=169 Identities=19% Similarity=0.164 Sum_probs=138.3
Q ss_pred CCE-EEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 896-6763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 162 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 162 ~~y-~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
++| ++.++||+|+||+||+|++. .++..||+|.+............+. +|+++|+.++|||||++
T Consensus 8 gry~~~~~~iG~G~fg~Vy~~~~~------~~~~~va~K~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~ 73 (270)
T d1t4ha_ 8 GRFLKFDIEIGRGSFKTVYKGLDT------ETTVEVAWCELQDRKLTKSERQRFK--------EEAEMLKGLQHPNIVRF 73 (270)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEGGGSCHHHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCEEEEEEEEECCCCCEEEEEEEC------CCCEEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 877885169700828499999999------9995999999851227989999999--------99999985799985069
Q ss_pred EEEEEE----CCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCCCCEEECC-C
Q ss_conf 169993----8967785138999-9888986199998879999999999999999989489--220689989737557-9
Q 000316 241 LGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD-S 312 (1678)
Q Consensus 241 ~~~~~~----~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~--IiHRDLKP~NILl~~-~ 312 (1678)
++++.+ ...+|+|||||+| +|.++++ +...+++..++.++.||+.||.|||+++ |+||||||+|||++. +
T Consensus 74 ~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~ 151 (270)
T d1t4ha_ 74 YDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 151 (270)
T ss_dssp EEEEEEESSSCEEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT
T ss_pred EEEEEECCCCCCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCEEECCC
T ss_conf 9998403345888999995789894899975--13554699999999999999999997899799687674351166799
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 9415999726885447888864466888842000244567642100012
Q 000316 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 313 g~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+ .+||+|||+|+...... .....||+.|||||++
T Consensus 152 ~--~~Kl~DFGla~~~~~~~-------------~~~~~GT~~Y~aPE~~ 185 (270)
T d1t4ha_ 152 G--SVKIGDLGLATLKRASF-------------AKAVIGTPEFMAPEMY 185 (270)
T ss_dssp S--CEEECCTTGGGGCCTTS-------------BEESCSSCCCCCGGGG
T ss_pred C--CEEEEECCCCEECCCCC-------------CCCCCCCCCCCCHHHH
T ss_conf 9--88980057654236876-------------6775538130089884
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=340.60 Aligned_cols=174 Identities=18% Similarity=0.153 Sum_probs=142.4
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|+++ .++..||+|.+............+. +|+++|+.++|||||++
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~ 68 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRK------SDGKILVWKELDYGSMTEAEKQMLV--------SEVNLLRELKHPNIVRY 68 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEECCTTSCHHHHHHHH--------HHHHHTTSCCCTTBCCE
T ss_pred CHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 333799679830889199999999------9997999999874657979999999--------99999997789998248
Q ss_pred EEEEEE--CCEEEEECCCCCC-CHHHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CEECCCCCCCEEEC
Q ss_conf 169993--8967785138999-988898619--9998879999999999999999989489-----22068998973755
Q 000316 241 LGLLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLG-----IAHRSVCPSNVLLT 310 (1678)
Q Consensus 241 ~~~~~~--~~~l~lV~E~~~g-~L~~~l~~~--~~~~l~~~~i~~i~~qil~aL~yLH~~~-----IiHRDLKP~NILl~ 310 (1678)
++++.+ .+.+|+|||||+| +|.+++... ....+++..++.++.||+.||.|||+++ |+||||||+|||++
T Consensus 69 ~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~ 148 (269)
T d2java1 69 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 148 (269)
T ss_dssp EEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC
T ss_pred EEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCC
T ss_conf 99999178998999995689993899998515457899999999999999999999997167788788586765425747
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 799415999726885447888864466888842000244567642100012
Q 000316 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 311 ~~g~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
.++ .+||+|||+|+........ .....||+.|||||++
T Consensus 149 ~~~--~vkl~DFG~a~~~~~~~~~-----------~~~~~gt~~Y~APE~l 186 (269)
T d2java1 149 GKQ--NVKLGDFGLARILNHDTSF-----------AKAFVGTPYYMSPEQM 186 (269)
T ss_dssp TTS--CEEECCHHHHHHC----------------------CCCSCCCHHHH
T ss_pred CCC--CEEEEECCCEEECCCCCCC-----------CCCCCCCCCCCCHHHH
T ss_conf 888--5798001000322457775-----------5667788232799998
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-44 Score=334.87 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=131.9
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
..++|++++.||+|+||+||+|+++ .++..||+|.++... .....+. +|+.+|+.++|||||+
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~------~~~~~~AiK~i~~~~---~~~~~~~--------~Ei~il~~l~HpnIv~ 65 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVET------SSKKTYMAKFVKVKG---TDQVLVK--------KEISILNIARHRNILH 65 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECCCT---HHHHHHH--------HHHHHHHHSCCTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCC---CCHHHHH--------HHHHHHHHCCCCCCCE
T ss_conf 7010588789831778399999998------999699999975786---6599999--------9999998579979890
Q ss_pred EEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 31699938967785138999-98889861999988799999999999999999894892206899897375579941599
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
++++|.+++.+|+|||||+| +|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++...+|
T Consensus 66 ~~~~~~~~~~~~lvmE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ik 144 (321)
T d1tkia_ 66 LHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144 (321)
T ss_dssp EEEEEEETTEEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEE
T ss_conf 98999889988999953899808899875-38999999999999999999999987699751355444344378851899
Q ss_pred EEECCCCCCC
Q ss_conf 9726885447
Q 000316 319 ICDKPLVGFN 328 (1678)
Q Consensus 319 I~DFGlar~~ 328 (1678)
|+|||+++..
T Consensus 145 l~DFG~~~~~ 154 (321)
T d1tkia_ 145 IIEFGQARQL 154 (321)
T ss_dssp ECCCTTCEEC
T ss_pred ECCCCHHHCC
T ss_conf 7644111003
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-44 Score=332.53 Aligned_cols=184 Identities=21% Similarity=0.307 Sum_probs=146.4
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
..++|+++++||+|+||+||+|+++ .++..||+|++++..........++ +|+.+|+.++|||||+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~hpniv~ 81 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDG------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMRHENVIG 81 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEET------TTCCEEEEEECSSTTSSHHHHHHHH--------HHHHHHHHCCBTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 4771899889801778199999999------9998999999852225969999999--------9999998668987547
Q ss_pred EEEEEEECC------EEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 316999389------67785138999988898619999887999999999999999998948922068998973755799
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g 313 (1678)
++++|...+ .+|+|||||+++|..+++ ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 82 l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~ 158 (346)
T d1cm8a_ 82 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC 158 (346)
T ss_dssp CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred EEEEECCCCCCCCCCEEEEEEECCCCCHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
T ss_conf 999863576555541599998405521899987---40226999999999999999998737876456685111121001
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 41599972688544788886446688884200024456764210001223-3332222223347
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRG 376 (1678)
Q Consensus 314 ~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~-~~~~~~~d~W~~G 376 (1678)
.+|++|||+|+..... .....+|+.|+|||++.+ ..++..+|+|+.|
T Consensus 159 --~~kl~Dfg~a~~~~~~--------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 206 (346)
T d1cm8a_ 159 --ELKILDFGLARQADSE--------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 206 (346)
T ss_dssp --CEEECCCTTCEECCSS--------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred --CCCCCCCCCEECCCCC--------------CCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCH
T ss_conf --2211343102206876--------------31024553335889981787899650103003
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-44 Score=330.84 Aligned_cols=193 Identities=20% Similarity=0.219 Sum_probs=148.1
Q ss_pred CCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC---C
Q ss_conf 3433789667633543272799999963777745562099999821577672778999985089935588851028---9
Q 000316 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---R 233 (1678)
Q Consensus 157 ~~~~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l---~ 233 (1678)
.++..++|+++++||+|+||+||+|++.. ..++.||+|++.............. +|+.+|+.+ +
T Consensus 2 ~c~~~~~Y~i~~~LG~G~fg~V~~a~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~~l~~l~~~~ 68 (305)
T d1blxa_ 2 LCRADQQYECVAEIGEGAYGKVFKARDLK-----NGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFE 68 (305)
T ss_dssp CCCGGGTEEEEEEEEEETTEEEEEEEETT-----TTTEEEEEEEEEEEBCTTSCBCTHH--------HHHHHHHHHHHTC
T ss_pred CCCCCCCEEEEEEEECCCCEEEEEEEEEC-----CCCEEEEEEEEEHHHCCCHHHHHHH--------HHHHHHHHHHHCC
T ss_conf 88875897988899215586999999988-----8998999999802324516799999--------9999999874258
Q ss_pred CCCCCCEEEEEEEC-----CEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEE
Q ss_conf 87613331699938-----9677851389999888986199998879999999999999999989489220689989737
Q 000316 234 HPNVAPVLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVL 308 (1678)
Q Consensus 234 HpNIV~l~~~~~~~-----~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NIL 308 (1678)
||||++++++|... ..+|++|||+++.+..+........+++..++.++.|++.||.|||+++|+||||||+|||
T Consensus 69 HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NIL 148 (305)
T d1blxa_ 69 HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNIL 148 (305)
T ss_dssp CTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred CCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEE
T ss_conf 98802366322146666674699999740587144444303789998999999999999999997588983579862789
Q ss_pred ECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55799415999726885447888864466888842000244567642100012233332222223347
Q 000316 309 LTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 309 l~~~g~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~~~~~~~d~W~~G 376 (1678)
++.++ .+||+|||+++....... .....||+.|+|||++.+.+|+.++|+|+.|
T Consensus 149 i~~~~--~~kl~dfg~~~~~~~~~~------------~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG 202 (305)
T d1blxa_ 149 VTSSG--QIKLADFGLARIYSFQMA------------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVG 202 (305)
T ss_dssp ECTTC--CEEECSCCSCCCCCGGGG------------GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ECCCC--CEEECCHHHHHHHCCCCC------------CCCCCCCHHHCCCCHHCCCCCCHHEHHHCHH
T ss_conf 85899--754210001011002345------------7776548511483100179888111000328
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-44 Score=335.38 Aligned_cols=151 Identities=16% Similarity=0.133 Sum_probs=130.6
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHH-HHHHHHHHCCCCCHHHHHHHC-CCCCCCCC
Q ss_conf 7896676335432727999999637777455620999998215776727-789999850899355888510-28987613
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPG-CLRHPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~l~~~~~~al~Ei~iL~-~l~HpNIV 238 (1678)
+++|++++.||+|+||+||+|+++ .+++.||+|++.+...... ....++ +|..++. .++|||||
T Consensus 1 iddy~i~~~iG~G~fg~Vy~~~~~------~t~~~vAvK~i~k~~~~~~~~~~~~~--------~e~~~l~~~~~hp~Iv 66 (320)
T d1xjda_ 1 IEDFILHKMLGKGSFGKVFLAEFK------KTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLT 66 (320)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHHHTTCTTBC
T ss_pred CCCEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHHCCCCCEE
T ss_conf 997188658940878289999999------99989999998055533848999999--------9999999847999687
Q ss_pred CEEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEE
Q ss_conf 331699938967785138999-9888986199998879999999999999999989489220689989737557994159
Q 000316 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~i 317 (1678)
++++++.+++.+|+|||||+| +|.++++ ....+++..++.++.||+.||.|||+++|+||||||+|||++.++ ++
T Consensus 67 ~~~~~~~~~~~~yivmEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~--~~ 142 (320)
T d1xjda_ 67 HMFCTFQTKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--HI 142 (320)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CE
T ss_pred EEEEEECCCCCEEEEEEECCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCC--CE
T ss_conf 89889704983167775037980899864--047899999999999999999999868934034765404444899--63
Q ss_pred EEEECCCCCCCC
Q ss_conf 997268854478
Q 000316 318 YICDKPLVGFNS 329 (1678)
Q Consensus 318 KI~DFGlar~~~ 329 (1678)
||+|||+|+...
T Consensus 143 kl~DFG~a~~~~ 154 (320)
T d1xjda_ 143 KIADFGMCKENM 154 (320)
T ss_dssp EECCCTTCBCCC
T ss_pred ECCCCCHHHHCC
T ss_conf 015553023235
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.1e-43 Score=329.38 Aligned_cols=155 Identities=21% Similarity=0.252 Sum_probs=133.7
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCH---HHHHHHHHHCCCCCHHHHHHHCCCC-CCC
Q ss_conf 789667633543272799999963777745562099999821577672---7789999850899355888510289-876
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG---QESKNFLRLIGVPSFDESSVPGCLR-HPN 236 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~---~~~~~~l~~~~~~al~Ei~iL~~l~-HpN 236 (1678)
.++|++++.||+|+||+||+|++. .++..+|+|++.+..... ...++... .+++|+.+|+.++ |||
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~------~~~~~~AvK~i~~~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~~hpn 71 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHK------PTCKEYAVKIIDVTGGGSFSAEEVQELRE----ATLKEVDILRKVSGHPN 71 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEEETTCSTTCCHHHHHHHHH----HHHHHHHHHHHHTTCTT
T ss_pred CCCCEECEEEECCCCEEEEEEEEC------CCCCEEEEEEEECCCCCCHHHHHHHHHHH----HHHHHHHHHHHHCCCCC
T ss_conf 663888528841768499999999------99989999999624464114788899999----99999999998507997
Q ss_pred CCCEEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCE
Q ss_conf 13331699938967785138999-98889861999988799999999999999999894892206899897375579941
Q 000316 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 237 IV~l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~ 315 (1678)
||++++++.+++.+|+|||||+| +|.++++ ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++
T Consensus 72 Iv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~-- 147 (277)
T d1phka_ 72 IIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-- 147 (277)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--
T ss_pred EEEEEEECCCCCCEEEEEECCCCCHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--
T ss_conf 4799762146760599997689866899998--659999999999999999999999875994323462548986899--
Q ss_pred EEEEEECCCCCCCC
Q ss_conf 59997268854478
Q 000316 316 WLYICDKPLVGFNS 329 (1678)
Q Consensus 316 ~iKI~DFGlar~~~ 329 (1678)
.+||+|||+|+...
T Consensus 148 ~~kl~DFG~a~~~~ 161 (277)
T d1phka_ 148 NIKLTDFGFSCQLD 161 (277)
T ss_dssp CEEECCCTTCEECC
T ss_pred CEEECCCHHEEECC
T ss_conf 83871240316726
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=3.4e-43 Score=325.88 Aligned_cols=150 Identities=21% Similarity=0.234 Sum_probs=131.6
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+++++||+|+||+||+|+++ ++..||+|++...........++. +|+.+|+.++|||||++
T Consensus 1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-------~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~hpnIv~~ 65 (286)
T d1ob3a_ 1 MEKYHGLEKIGEGTYGVVYKAQNN-------YGETFALKKIRLEKEDEGIPSTTI--------REISILKELKHSNIVKL 65 (286)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEET-------TSCEEEEEEECCSSGGGCCCHHHH--------HHHHGGGGCCCTTBCCE
T ss_pred CCCCEECCEEECCCCCEEEEEEEC-------CCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 999634318722778189999968-------999999999812326858999999--------99999986799868766
Q ss_pred EEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEE
Q ss_conf 16999389677851389999888986199998879999999999999999989489220689989737557994159997
Q 000316 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI~ 320 (1678)
++++...+..|+++|++.+.+...+.. ..+.+++..++.++.||+.||+|||+++|+||||||+|||++.++ .+||+
T Consensus 66 ~~~~~~~~~~~i~~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~--~~kl~ 142 (286)
T d1ob3a_ 66 YDVIHTKKRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIA 142 (286)
T ss_dssp EEEEECSSCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEEC
T ss_pred EEECCCCCCEEEEEEEEHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCC--CEEEC
T ss_conf 012046773158997400456789986-047751445689999999999986057488267877505686899--78732
Q ss_pred ECCCCCCC
Q ss_conf 26885447
Q 000316 321 DKPLVGFN 328 (1678)
Q Consensus 321 DFGlar~~ 328 (1678)
|||.|...
T Consensus 143 DfG~a~~~ 150 (286)
T d1ob3a_ 143 DFGLARAF 150 (286)
T ss_dssp CTTHHHHH
T ss_pred CCCCCEEC
T ss_conf 36643011
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-43 Score=327.31 Aligned_cols=147 Identities=22% Similarity=0.297 Sum_probs=124.8
Q ss_pred CCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEE
Q ss_conf 89667633543272799999963777745562099999821577672778999985089935588851028987613331
Q 000316 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1678)
Q Consensus 162 ~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l~ 241 (1678)
.+|+.+++||+|+||+||+|++. .++..||||++...+.... +|+.+|+.++||||++++
T Consensus 20 ~~Y~~~k~LG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~--------------~Ei~il~~l~h~niv~~~ 79 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFGVVYQAKLC------DSGELVAIKKVLQDKRFKN--------------RELQIMRKLDHCNIVRLR 79 (350)
T ss_dssp EEEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECCSSSCC--------------HHHHHHHHCCCTTBCCEE
T ss_pred CCCEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECCCCHHHH--------------HHHHHHHHCCCCCCCCEE
T ss_conf 77675169821768399999999------9997999999881606899--------------999999866898987387
Q ss_pred EEEEEC------CEEEEECCCCCCCHHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 699938------96778513899998889861--9999887999999999999999998948922068998973755799
Q 000316 242 GLLKTS------GLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 242 ~~~~~~------~~l~lV~E~~~g~L~~~l~~--~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g 313 (1678)
++|... ..+|+|||||++++...+.. .....+++..++.++.||+.||+|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~ 159 (350)
T d1q5ka_ 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT 159 (350)
T ss_dssp EEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT
T ss_pred EEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
T ss_conf 89974476577318999984168860788886310368999999999999999999999866876457886037873589
Q ss_pred CEEEEEEECCCCCCCC
Q ss_conf 4159997268854478
Q 000316 314 WSWLYICDKPLVGFNS 329 (1678)
Q Consensus 314 ~~~iKI~DFGlar~~~ 329 (1678)
. .+||+|||+|+...
T Consensus 160 ~-~~kl~DFG~a~~~~ 174 (350)
T d1q5ka_ 160 A-VLKLCDFGSAKQLV 174 (350)
T ss_dssp C-CEEECCCTTCEECC
T ss_pred C-CEEEECCCCHHHCC
T ss_conf 7-11673366054404
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-43 Score=322.86 Aligned_cols=193 Identities=20% Similarity=0.184 Sum_probs=149.9
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
..++|+++++||+|+||+||+|++. .++..||||++...........+++ +|+.+|+.++||||++
T Consensus 8 ~~~rY~i~~~LG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~h~nii~ 73 (318)
T d3blha1 8 EVSKYEKLAKIGQGTFGEVFKARHR------KTGQKVALKKVLMENEKEGFPITAL--------REIKILQLLKHENVVN 73 (318)
T ss_dssp BGGGEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEC----CTTSSCHHHH--------HHHHHHHHCCCTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHHCCCCCCC
T ss_conf 6279889999722748299999998------9997999999842224637899999--------9999999835999660
Q ss_pred EEEEEEEC--------CEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 31699938--------9677851389999888986199998879999999999999999989489220689989737557
Q 000316 240 VLGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 240 l~~~~~~~--------~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~ 311 (1678)
+++++... ..+|+||||+++.+...+. .....+++..++.++.|++.||.|||+++|+||||||+|||++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~-~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~ 152 (318)
T d3blha1 74 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR 152 (318)
T ss_dssp EEEEEEC----------CEEEEEECCCEEHHHHHT-CTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred EEEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHH-HCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECC
T ss_conf 67654024654444576389998535787410122-20344330899999999999998852299885676722203668
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 9941599972688544788886446688884200024456764210001223-3332222223347
Q 000316 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRG 376 (1678)
Q Consensus 312 ~g~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~-~~~~~~~d~W~~G 376 (1678)
++ .+||+|||+|+.......... .. .....||+.|+|||++.. ..|+.++|+|+.|
T Consensus 153 ~~--~~kl~dfg~~~~~~~~~~~~~-~~------~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlG 209 (318)
T d3blha1 153 DG--VLKLADFGLARAFSLAKNSQP-NR------YTNRVVTLWYRPPELLLGERDYGPPIDLWGAG 209 (318)
T ss_dssp TS--CEEECCCTTCEECCC-----C-CC------CCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred CC--CEEEEECCEEEECCCCCCCCC-CC------CCCEECCHHHHHHHHHCCCCCCCCHHHCCCCC
T ss_conf 99--687631350022355444321-13------56602497874289970799989178700678
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-44 Score=331.48 Aligned_cols=172 Identities=17% Similarity=0.135 Sum_probs=135.0
Q ss_pred CCCCCCCEEEEE-EEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHC-CCCC
Q ss_conf 343378966763-35432727999999637777455620999998215776727789999850899355888510-2898
Q 000316 157 CSRIMTALFPIA-FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG-CLRH 234 (1678)
Q Consensus 157 ~~~~~~~y~~~~-~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~-~l~H 234 (1678)
.....++|++++ .||+|+||.||+|++. .++..||+|++.... ... +|+.++. .++|
T Consensus 6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~-------~~~--------~E~~~~~~~~~h 64 (335)
T d2ozaa1 6 KNAIIDDYKVTSQVLGLGINGKVLQIFNK------RTQEKFALKMLQDCP-------KAR--------REVELHWRASQC 64 (335)
T ss_dssp CSCGGGTEEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEECSH-------HHH--------HHHHHHHHHTTS
T ss_pred CCCCCCCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECCCH-------HHH--------HHHHHHHHHCCC
T ss_conf 99701487981079654548699999988------999899999989747-------799--------999999986699
Q ss_pred CCCCCEEEEEEE----CCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEE
Q ss_conf 761333169993----8967785138999-98889861999988799999999999999999894892206899897375
Q 000316 235 PNVAPVLGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1678)
Q Consensus 235 pNIV~l~~~~~~----~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl 309 (1678)
||||+++++|++ ...+|+|||||+| +|.++++......+++..++.++.||+.||.|||+++|+||||||+|||+
T Consensus 65 pnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll 144 (335)
T d2ozaa1 65 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 144 (335)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99782989995034689789999977899849999986278775799999999999999999997698644410022011
Q ss_pred CCCC-CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 5799-415999726885447888864466888842000244567642100012
Q 000316 310 TDSC-WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 310 ~~~g-~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+..+ ...+||+|||+|+....... . ....||+.|+|||++
T Consensus 145 ~~~~~~~~~Kl~DFG~a~~~~~~~~------~------~~~~gt~~y~aPE~~ 185 (335)
T d2ozaa1 145 TSKRPNAILKLTDFGFAKETTSHNS------L------TTPCYTPYYVAPEVL 185 (335)
T ss_dssp SCSSTTCCEEECCCTTCEECCCCCC------C------CCCSCCCSSCCCCCC
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCC------C------CCCCCCCCCCCCHHH
T ss_conf 3555566311354551233368886------4------322677563792777
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-43 Score=325.45 Aligned_cols=150 Identities=23% Similarity=0.327 Sum_probs=128.7
Q ss_pred CCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 33789667633543272799999963777745562099999821577672778999985089935588851028987613
Q 000316 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 159 ~~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV 238 (1678)
...++|+++++||+|+||+||+|+++ .++..||+|++.+.. ......+++ +|+.+|+.++||||+
T Consensus 5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~-~~~~~~~~~--------~Ei~il~~l~hp~iv 69 (345)
T d1pmea_ 5 DVGPRYTNLSYIGEGAYGMVCSAYDN------VNKVRVAIKKISPFE-HQTYCQRTL--------REIKILLRFRHENII 69 (345)
T ss_dssp CCCTTEEEEEECC---CCCEEEEEET------TTCSEEEEEEECCTT-CHHHHHHHH--------HHHHHHHHCCCTTBC
T ss_pred CCCCCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHC-CHHHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 73898599789940648099999999------999499999980310-958999999--------999999976898988
Q ss_pred CEEEEEEECC-----EEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 3316999389-----67785138999988898619999887999999999999999998948922068998973755799
Q 000316 239 PVLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 239 ~l~~~~~~~~-----~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g 313 (1678)
++++++.... .+|+++++++|+|.+++.. ..+++..++.++.|++.||.|||+++|+||||||+|||++.++
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~ 146 (345)
T d1pmea_ 70 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC 146 (345)
T ss_dssp CCCEEECCSSTTTCCCEEEEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred CEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
T ss_conf 5888995056455414999996259865664405---8999999999999999999999978986777876437887999
Q ss_pred CEEEEEEECCCCCCC
Q ss_conf 415999726885447
Q 000316 314 WSWLYICDKPLVGFN 328 (1678)
Q Consensus 314 ~~~iKI~DFGlar~~ 328 (1678)
.+||+|||+|+..
T Consensus 147 --~~kl~DfG~a~~~ 159 (345)
T d1pmea_ 147 --DLKICDFGLARVA 159 (345)
T ss_dssp --CEEECCCTTCEEC
T ss_pred --CEEECCCCCEEEC
T ss_conf --7787545705650
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-41 Score=314.46 Aligned_cols=187 Identities=18% Similarity=0.194 Sum_probs=149.0
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
+++|+++++||+|+||+||+|++. .++..||+|+++..........++. +|+.+|+.++||||+++
T Consensus 1 ~~ry~~i~~LG~G~fg~V~~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~h~niv~~ 66 (292)
T d1unla_ 1 MQKYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSAL--------REICLLKELKHKNIVRL 66 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEEESSCSSTTHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 999786269712868199999999------9996999999803217868999999--------99999985675788821
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++.+....++|+|++.| ++..++. ..+.+++..++.++.|++.||+|||+++|+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~iv~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~--~~kl 142 (292)
T d1unla_ 67 HDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKL 142 (292)
T ss_dssp EEEEECSSEEEEEEECCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC--CEEE
T ss_conf 354444431158863023322211212--356540367899999999998774339986001467612113378--2665
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 7268854478888644668888420002445676421000122333-32222223347
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-WHSQFNRWWRG 376 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~~-~~~~~d~W~~G 376 (1678)
+|||.|+........ ....++++.|+|||++.... ++.++|+|+.|
T Consensus 143 ~DFG~a~~~~~~~~~-----------~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG 189 (292)
T d1unla_ 143 ANFGLARAFGIPVRC-----------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG 189 (292)
T ss_dssp CCCTTCEECCSCCSC-----------CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred EECCHHHCCCCCCCC-----------CEEECCCCCHHHHHHHCCCCCCCCHHHCCCCC
T ss_conf 204601104688751-----------00103443101466750698888044402654
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-43 Score=329.70 Aligned_cols=174 Identities=12% Similarity=0.067 Sum_probs=139.2
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC--CCCCC
Q ss_conf 7896676335432727999999637777455620999998215776727789999850899355888510289--87613
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR--HPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~--HpNIV 238 (1678)
.++|++.+.||+|+||+||+|++. .++..||+|.+.+............ ....+|+.+|+.++ |||||
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~----~~~~~E~~il~~l~~~h~nIv 72 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRV------SDNLPVAIKHVEKDRISDWGELPNG----TRVPMEVVLLKKVSSGFSGVI 72 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEEGGGCCCEEECTTC----CEEEHHHHHHHHHCSSSCSBC
T ss_pred CCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHH----HHHHHHHHHHHHHCCCCCCCC
T ss_conf 883799679840878399999999------9997999999856884433455679----999999999997435898812
Q ss_pred CEEEEEEECCEEEEECCCCCC--CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCC-CCE
Q ss_conf 331699938967785138999--98889861999988799999999999999999894892206899897375579-941
Q 000316 239 PVLGLLKTSGLITSVIPKTPY--TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CWS 315 (1678)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g--~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~-g~~ 315 (1678)
++++++.+++.+|+||||+.+ ++.++++ ....+++..++.++.||+.||.|||+++|+||||||+|||++.+ +
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~-- 148 (273)
T d1xwsa_ 73 RLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG-- 148 (273)
T ss_dssp CEEEEEECSSEEEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT--
T ss_pred EEEEEEEECCEEEEEEEECCCCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC--
T ss_conf 799998309968999983368622899986--1589999999999999999999998779755667611147744788--
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 5999726885447888864466888842000244567642100012
Q 000316 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 316 ~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
.+||+|||+|+...... .....||+.|+|||++
T Consensus 149 ~vkl~DFG~a~~~~~~~-------------~~~~~GT~~y~aPE~~ 181 (273)
T d1xwsa_ 149 ELKLIDFGSGALLKDTV-------------YTDFDGTRVYSPPEWI 181 (273)
T ss_dssp EEEECCCTTCEECCSSC-------------BCCCCSCGGGSCHHHH
T ss_pred EEEECCCCCCEECCCCC-------------CCCCCCCCCCCCHHHH
T ss_conf 48977546535324445-------------5665658774799998
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-42 Score=321.22 Aligned_cols=149 Identities=23% Similarity=0.293 Sum_probs=127.4
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
..++|+++++||+|+||+||+|++. .++..||+|++.+.........++. +|+.+|+.++|||||+
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~h~~iv~ 81 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHENVIG 81 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEET------TTTEEEEEEECSCTTSSHHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCHHCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 8987188889831788399999999------9997999999882002868999999--------9999998668987425
Q ss_pred EEEEEEECC------EEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 316999389------67785138999988898619999887999999999999999998948922068998973755799
Q 000316 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~~------~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g 313 (1678)
+++++.... ..++++++++|+|.+++. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~ 158 (348)
T d2gfsa1 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158 (348)
T ss_dssp CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred EEEEEEECCCCCCCCEEEEEEEECCCCHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 999996346456686499999625886232002---24530999999999999999999738876516677633455432
Q ss_pred CEEEEEEECCCCCC
Q ss_conf 41599972688544
Q 000316 314 WSWLYICDKPLVGF 327 (1678)
Q Consensus 314 ~~~iKI~DFGlar~ 327 (1678)
.+|++|||+|..
T Consensus 159 --~~kl~dfg~a~~ 170 (348)
T d2gfsa1 159 --ELKILDFGLARH 170 (348)
T ss_dssp --CEEECCC----C
T ss_pred --CCCCCCCCHHCC
T ss_conf --200132100012
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-42 Score=315.58 Aligned_cols=188 Identities=20% Similarity=0.250 Sum_probs=158.4
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
..++|+++++||+|+||+||+|++. .++..||+|++...........++. +|+.+|+.++|||||+
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~------~t~~~vAvK~i~~~~~~~~~~~~~~--------~Ei~il~~l~hpnIv~ 80 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIS 80 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEET------TTTEEEEEEEEESTTSSHHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred ECCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 3377599889621758599999999------9998999999882336979999999--------9999998648987648
Q ss_pred EEEEEEEC------CEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 31699938------967785138999988898619999887999999999999999998948922068998973755799
Q 000316 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 240 l~~~~~~~------~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g 313 (1678)
++++|... ..+|+|||||.|++.+.+. ..+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~ 156 (355)
T d2b1pa1 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_dssp CSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred EEEEEECCCCCCCCCEEEEEEECCCHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 998970256434576269998414467787650----3899999999999999999886522112456776321136544
Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 415999726885447888864466888842000244567642100012233332222223347652
Q 000316 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1678)
Q Consensus 314 ~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~~~~~~~d~W~~G~is 379 (1678)
.+|++|||+++...... ......+|+.|+|||++.+..|+..+|+|+.|++.
T Consensus 157 --~~kl~df~~~~~~~~~~------------~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l 208 (355)
T d2b1pa1 157 --TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 208 (355)
T ss_dssp --CEEECCCCC---------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred --CEEEECHHHHHCCCCCC------------CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHH
T ss_conf --31320102321146665------------53322146555581331477778774333566257
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=5.3e-41 Score=309.87 Aligned_cols=182 Identities=21% Similarity=0.283 Sum_probs=148.6
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC-CCCCCC
Q ss_conf 7896676335432727999999637777455620999998215776727789999850899355888510289-876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~-HpNIV~ 239 (1678)
.++|+++++||+|+||+||+|++. .++..||+|+++... ..++. +|+.+|+.++ ||||++
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~-----~~~~~--------~Ei~il~~l~~hpnIv~ 94 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINI------TNNEKVVVKILKPVK-----KKKIK--------REIKILENLRGGPNIIT 94 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSSC-----HHHHH--------HHHHHHHHHTTSTTBCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHH-----HHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 867189789831748199999988------999799999988899-----99999--------99999985157998767
Q ss_pred EEEEEEEC--CEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEE
Q ss_conf 31699938--967785138999-988898619999887999999999999999998948922068998973755799415
Q 000316 240 VLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 240 l~~~~~~~--~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~ 316 (1678)
++++|... ..+++|||||++ +|..+. +.+++..++.++.||+.||.|||++||+||||||+|||++.++. .
T Consensus 95 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~-~ 168 (328)
T d3bqca1 95 LADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-K 168 (328)
T ss_dssp EEEEEECTTTCSEEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT-E
T ss_pred EEEEEEECCCCCEEEEEEECCCCCHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC-E
T ss_conf 99999816877126888631798589974-----68999999999999999998876433443456441237748998-3
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 99972688544788886446688884200024456764210001223-3332222223347652
Q 000316 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELS 379 (1678)
Q Consensus 317 iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~-~~~~~~~d~W~~G~is 379 (1678)
+||+|||+|+....... .....+|+.|+|||++.+ ..|+.++|+|+.|++.
T Consensus 169 vkl~DFG~a~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l 220 (328)
T d3bqca1 169 LRLIDWGLAEFYHPGQE------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCML 220 (328)
T ss_dssp EEECCGGGCEECCTTCC------------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred EEECCCCCCEECCCCCC------------CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 66415654266468874------------44322486424761026888888452323354555
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-41 Score=309.10 Aligned_cols=171 Identities=18% Similarity=0.105 Sum_probs=138.4
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||+||+|+.+ ..||||+++...........+. +|+.+|+.++|||||++
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~---------~~vAvK~~~~~~~~~~~~~~~~--------~E~~~l~~l~HpnIv~~ 69 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH---------GDVAVKMLNVTAPTPQQLQAFK--------NEVGVLRKTRHVNILLF 69 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS---------SEEEEEECCCSSCCTTHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCEEEEEEEEECCCCEEEEEEEC---------CEEEEEEEECCCCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 451899889830788589999999---------9899999973469989999999--------99999984799878645
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 169993896778513899-9988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++. .+.+|+|||||+ |+|.+++.. ....+++..+..++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 70 ~~~~~-~~~~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~--~~Kl 145 (276)
T d1uwha_ 70 MGYST-APQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKI 145 (276)
T ss_dssp EEEEC-SSSCEEEEECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTS--SEEE
T ss_pred EEEEE-CCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 67971-5589999965899888999852-357899999999999999998887509995161478997981899--7887
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+|||+|+......... ......||+.|||||++
T Consensus 146 ~DFGla~~~~~~~~~~---------~~~~~~gt~~y~APE~l 178 (276)
T d1uwha_ 146 GDFGLATVKSRWSGSH---------QFEQLSGSILWMAPEVI 178 (276)
T ss_dssp CCCCCSCC---------------------CCCCGGGCCHHHH
T ss_pred CCCCCEEECCCCCCCC---------CCCCCCCCCCCCCHHHH
T ss_conf 5002213335567763---------12566557431799999
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-41 Score=314.26 Aligned_cols=152 Identities=16% Similarity=0.153 Sum_probs=130.6
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHH--HHHHHHHHCCCCCHHHHHHHCCCCC-CCC
Q ss_conf 7896676335432727999999637777455620999998215776727--7899998508993558885102898-761
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCLRH-PNV 237 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~--~~~~~l~~~~~~al~Ei~iL~~l~H-pNI 237 (1678)
+++|+++++||+|+||+||+|++... ..++..||+|.+++...... ....+ .+|+.+|+.++| |||
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~~~---~~~g~~vAvK~i~~~~~~~~~~~~~~~--------~~E~~il~~l~h~pnI 91 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKISG---HDTGKLYAMKVLKKATIVQKAKTTEHT--------RTERQVLEHIRQSPFL 91 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSS---TTTTCEEEEEEESEEEEEEEESSGGGC--------CCHHHHHHHHHTCTTB
T ss_pred HHCEEEEEEEECCCCEEEEEEEECCC---CCCCCEEEEEEEEHHHHCCCHHHHHHH--------HHHHHHHHHCCCCCEE
T ss_conf 10259998983287839999998765---887948999998367721016899999--------9999999864679839
Q ss_pred CCEEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEE
Q ss_conf 3331699938967785138999-988898619999887999999999999999998948922068998973755799415
Q 000316 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1678)
Q Consensus 238 V~l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~ 316 (1678)
+++++++.+...+|+||||+.| +|.+++. ..+.+++..++.++.||+.||.|+|+++|+||||||+|||++.++ .
T Consensus 92 v~~~~~~~~~~~~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~--~ 167 (322)
T d1vzoa_ 92 VTLHYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--H 167 (322)
T ss_dssp CCEEEEEEETTEEEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--C
T ss_pred EEEEEEECCCCCEEEEEECCCCCHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCC--C
T ss_conf 996200024873001231234117999987--304543788888899999999885149989654773201246999--8
Q ss_pred EEEEECCCCCC
Q ss_conf 99972688544
Q 000316 317 LYICDKPLVGF 327 (1678)
Q Consensus 317 iKI~DFGlar~ 327 (1678)
+||+|||+|+.
T Consensus 168 vkL~DFG~a~~ 178 (322)
T d1vzoa_ 168 VVLTDFGLSKE 178 (322)
T ss_dssp EEESCSSEEEE
T ss_pred EEEEECCCHHH
T ss_conf 88741320222
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.1e-37 Score=282.47 Aligned_cols=290 Identities=18% Similarity=0.280 Sum_probs=200.1
Q ss_pred EEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEE-
Q ss_conf 9968984268941266647999991499989997217897775999969998388897137864779865399991782-
Q 000316 1312 PWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS- 1390 (1678)
Q Consensus 1312 lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS- 1390 (1678)
.|........+|+||.++|++++|+|++++|+|||. |++|++||+.+++++.++++|.+.|.+++|++++..+++
T Consensus 2 ~w~p~~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~----Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~ 77 (317)
T d1vyhc1 2 EWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASE----DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASC 77 (317)
T ss_dssp CCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEES----SSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCC
T ss_conf 368989844898588887689999389899999938----9929999899997999995788867777630111101111
Q ss_pred -CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE
Q ss_conf -7995999979999456996046766556689998753334554443345777778378631598306767614997999
Q 000316 1391 -CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1469 (1678)
Q Consensus 1391 -~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lv 1469 (1678)
.++++..|+....+....+..+. ..+.++.++++++.++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~ 117 (317)
T d1vyhc1 78 SADMTIKLWDFQGFECIRTMHGHD----------------------------------------HNVSSVSIMPNGDHIV 117 (317)
T ss_dssp ETTSCCCEEETTSSCEEECCCCCS----------------------------------------SCEEEEEECSSSSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCC----------------------------------------CCCEEEECCCCCCEEE
T ss_conf 111110111001111111100000----------------------------------------0000000169985577
Q ss_pred EEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEE
Q ss_conf 99789919999888990358861799755678751078750897544586557998899994099299996899929999
Q 000316 1470 VGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS 1549 (1678)
Q Consensus 1470 sgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~ 1549 (1678)
+++.|+.+++||+++++.+..+.++ ...+.++++. +++.++++|+.|+.|++||..+++....
T Consensus 118 ~~~~d~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-----------~~~~~l~~~~~d~~v~~~~~~~~~~~~~ 180 (317)
T d1vyhc1 118 SASRDKTIKMWEVQTGYCVKTFTGH------REWVRMVRPN-----------QDGTLIASCSNDQTVRVWVVATKECKAE 180 (317)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECC------SSCEEEEEEC-----------TTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEECCCCEEEEEECCC------CCCCEEEECC-----------CCCCEEEEEECCCEEEEEEECCCEEEEE
T ss_conf 6526752357511443034687167------7763000016-----------6799999992798299975125403478
Q ss_pred EECCCCCEEEEE-CCC--------------------CCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EEEEC
Q ss_conf 931588769998-089--------------------9999999599939999869999888769505899889--99752
Q 000316 1550 WRAHDGYVTKLA-APE--------------------DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVW 1606 (1678)
Q Consensus 1550 l~gH~~~V~sIa-spd--------------------g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpd 1606 (1678)
+.+|...+.++. +|+ +..+++++.|+.|++||+.++ ..+..+.+|...|. +++|+
T Consensus 181 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~ 258 (317)
T d1vyhc1 181 LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG--MCLMTLVGHDNWVRGVLFHSG 258 (317)
T ss_dssp ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECSS
T ss_pred EECCCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCC--CEEEEEECCCCCEEEEEECCC
T ss_conf 824778733799863256411103456303430258861475169978999888999--688999688998799998799
Q ss_pred CCEEEEEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 99999994897-5999567788978961000310234306987657489999944998999994898399909
Q 000316 1607 GQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1607 g~~LaSgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+++|++|+.|+ |++||+.. +.. ..... +|.+.|++++|+|++++|++|+.||+|++||
T Consensus 259 ~~~l~s~~~dg~i~iwd~~~-----~~~-------~~~~~--~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 259 GKFILSCADDKTLRVWDYKN-----KRC-------MKTLN--AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp SSCEEEEETTTEEEEECCTT-----SCC-------CEEEE--CCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCEEEEEECCCEEEEEECCC-----CCE-------EEEEC--CCCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf 99999997989499999999-----919-------99992--8999889999949999999992899499829
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-35 Score=270.96 Aligned_cols=301 Identities=17% Similarity=0.248 Sum_probs=186.8
Q ss_pred EEEECCCCEEEEECC-CC----EEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEE------
Q ss_conf 999199979999689-84----2689412666479999914999899972178977759999699983888971------
Q 000316 1302 GRVGGLKDESPWKIK-AS----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY------ 1370 (1678)
Q Consensus 1302 asgS~D~~v~lWd~~-g~----~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~------ 1370 (1678)
.++..++...+|+.. .. .+....+|++.|+|++|+|||++|++|+ |++|++||+.+++++..+.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-----d~~i~iW~~~~~~~~~~~~~~~~~~ 106 (388)
T d1erja_ 32 LKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-----NKTTQVYRVSDGSLVARLSDDSAAN 106 (388)
T ss_dssp SEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-----BSCEEEEETTTCCEEEEECC-----
T ss_pred CCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEE-----CCEEEEEEECCCCEEEEECCCCCCC
T ss_conf 24688970898688777620541076079999689999999999999994-----9948999813640576631665443
Q ss_pred ------------CCCCCEEEEEECCCCCCE--EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------------378647798653999917--827995999979999456996046766556689998753334554443
Q 000316 1371 ------------GHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1436 (1678)
Q Consensus 1371 ------------gH~~~V~sI~fsp~~~~l--aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~ 1436 (1678)
+|...|++++|++++..+ ++.|++|++||..+++.+..+..|.
T Consensus 107 ~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~----------------------- 163 (388)
T d1erja_ 107 KDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE----------------------- 163 (388)
T ss_dssp ------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-----------------------
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC-----------------------
T ss_conf 244321110146778988999988999801213444111121111111111111111-----------------------
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 34577777837863159830676761499799999789919999888990358861799755678751078750897544
Q 000316 1437 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQ 1516 (1678)
Q Consensus 1437 ~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s 1516 (1678)
. .+.++.+++++..+++++.++.+++||.++.........+. ...++++.+
T Consensus 164 -------~----------~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~~~~~~~----- 214 (388)
T d1erja_ 164 -------Q----------DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED-------GVTTVAVSP----- 214 (388)
T ss_dssp -------S----------CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-------CEEEEEECS-----
T ss_pred -------C----------CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC-------CCCCCCCCC-----
T ss_conf -------1----------11110111111111122210156541011111100001245-------442112368-----
Q ss_pred CCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEE-------ECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCC-
Q ss_conf 5865579988999940992999968999299999-------31588769998-08999999995999399998699998-
Q 000316 1517 AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW-------RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP- 1587 (1678)
Q Consensus 1517 ~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l-------~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~- 1587 (1678)
.+++++++|+.||.|++||.+++..+..+ .+|...|++++ +|++++|++++.|+.|++||++++..
T Consensus 215 -----~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~ 289 (388)
T d1erja_ 215 -----GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 289 (388)
T ss_dssp -----TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred -----CCCCEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCC
T ss_conf -----878758997389819996345573000102443334577898789999799999999978992898751577643
Q ss_pred ---------CCCEEEECCCCCEE--EEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEE
Q ss_conf ---------88769505899889--9975299999994897-59995677889789610003102343069876574899
Q 000316 1588 ---------SQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSS 1655 (1678)
Q Consensus 1588 ---------~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~s 1655 (1678)
........|...|. +|++++++|++|+.|+ |++||+. .+.. ..... +|.+.|++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~-----~~~~-------~~~l~--~H~~~V~~ 355 (388)
T d1erja_ 290 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK-----SGNP-------LLMLQ--GHRNSVIS 355 (388)
T ss_dssp ---------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT-----TCCE-------EEEEE--CCSSCEEE
T ss_pred CCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECC-----CCCE-------EEEEE--CCCCCEEE
T ss_conf 2101344420011012455327899988999999999698979999999-----9969-------99996--88997899
Q ss_pred EEE------ECCCCEEEEEECCCCEEECC
Q ss_conf 999------44998999994898399909
Q 000316 1656 ISI------LPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1656 iaf------sPd~~lLatgs~DG~IrIwd 1678 (1678)
+++ +|++.+|++|+.||+|+||+
T Consensus 356 ~~~~~~~~~spd~~~l~s~s~Dg~I~iW~ 384 (388)
T d1erja_ 356 VAVANGSSLGPEYNVFATGSGDCKARIWK 384 (388)
T ss_dssp EEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred EEEECCCCCCCCCCEEEEEECCCEEEEEE
T ss_conf 99846742589999999991899799976
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-36 Score=272.42 Aligned_cols=278 Identities=14% Similarity=0.221 Sum_probs=199.6
Q ss_pred EEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEE-----EEEEECCCCCEEEEEECCCCCCE--EEC
Q ss_conf 26894126664799999149998999721789777599996999838-----88971378647798653999917--827
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC-----VSGYYGHEEVVNDICVLSSSGRI--ASC 1391 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~-----l~tl~gH~~~V~sI~fsp~~~~l--aS~ 1391 (1678)
.+.++ +|.+.|.|++|+|++++|+||+ |++|++||+.++.. .....+|.+.|.+++|+|++..+ ++.
T Consensus 44 ~~~~~-~H~~~V~~v~fs~~g~~latg~-----dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~ 117 (337)
T d1gxra_ 44 QINTL-NHGEVVCAVTISNPTRHVYTGG-----KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp EEEEE-CCSSCCCEEEECSSSSEEEEEC-----BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES
T ss_pred EEEEC-CCCCCEEEEEECCCCCEEEEEE-----CCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC
T ss_conf 99987-9999289999989999999997-----99889977367763311687640488996899998679988988612
Q ss_pred CCCEEEEECCCCC--EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE
Q ss_conf 9959999799994--56996046766556689998753334554443345777778378631598306767614997999
Q 000316 1392 DGTLHVWNSQTGK--LLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1469 (1678)
Q Consensus 1392 DgtIkIWD~~tg~--~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lv 1469 (1678)
|++|++||+.... ....+..+ ...+.++.+++++..++
T Consensus 118 dg~i~iwd~~~~~~~~~~~~~~~----------------------------------------~~~v~~~~~~~~~~~l~ 157 (337)
T d1gxra_ 118 ASTLSIWDLAAPTPRIKAELTSS----------------------------------------APACYALAISPDSKVCF 157 (337)
T ss_dssp SSEEEEEECCCC--EEEEEEECS----------------------------------------SSCEEEEEECTTSSEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC----------------------------------------CCCCCCCCCCCCCCCCC
T ss_conf 33211111111111111111111----------------------------------------11111111111111111
Q ss_pred EEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEE
Q ss_conf 99789919999888990358861799755678751078750897544586557998899994099299996899929999
Q 000316 1470 VGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS 1549 (1678)
Q Consensus 1470 sgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~ 1549 (1678)
+++.|+.+++||+.++++.....++ ...+.+++++ +++..+++|+.|+.+++||+++++.+..
T Consensus 158 s~~~d~~i~~~~~~~~~~~~~~~~~------~~~v~~l~~s-----------~~~~~~~~~~~d~~v~i~d~~~~~~~~~ 220 (337)
T d1gxra_ 158 SCCSDGNIAVWDLHNQTLVRQFQGH------TDGASCIDIS-----------NDGTKLWTGGLDNTVRSWDLREGRQLQQ 220 (337)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCC------SSCEEEEEEC-----------TTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCEEECC
T ss_conf 1111111111111111111111111------1111101234-----------4432112235665532111111000002
Q ss_pred EECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEECCC
Q ss_conf 931588769998-08999999995999399998699998887695058998899--975299999994897-59995677
Q 000316 1550 WRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSK 1625 (1678)
Q Consensus 1550 l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~iwdl~~ 1625 (1678)
+. |...|++++ +|+++++++++.|+.+++||++.+. ......|...|.+ |+|+++++++++.|+ |++|++.
T Consensus 221 ~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~- 295 (337)
T d1gxra_ 221 HD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD---KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP- 295 (337)
T ss_dssp EE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC---EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-
T ss_pred CC-CCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCCC---CCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC-
T ss_conf 46-66615799971530300000025642111111111---00001245654169998999999999489969999899-
Q ss_pred CCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 88978961000310234306987657489999944998999994898399909
Q 000316 1626 SADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1626 ~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+.. +... .|...|++++|+|++++|++|+.||+|+||+
T Consensus 296 ----~~~~------~~~~----~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 296 ----YGAS------IFQS----KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp ----TCCE------EEEE----ECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred ----CCCE------EEEC----CCCCCEEEEEEECCCCEEEEEECCCEEEEEE
T ss_conf ----9979------9992----6999879999927999999990899699997
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.9e-36 Score=272.15 Aligned_cols=289 Identities=15% Similarity=0.264 Sum_probs=252.1
Q ss_pred CCCCCCCCCEEE--ECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCC
Q ss_conf 234678991681--0599998899869999199979999689-8426894126664799999149998999721789777
Q 000316 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1277 ~~~~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1353 (1678)
.++.||++.|++ |+|++.+ |+|||.|++|++||+. +.++.++.+|.+.|.+++|++++..+++++. ++
T Consensus 11 ~~L~GH~~~I~~l~~sp~~~~-----l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~----~~ 81 (317)
T d1vyhc1 11 YALSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA----DM 81 (317)
T ss_dssp CEEECCSSCEEEEEECSSSSE-----EEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET----TS
T ss_pred EEECCCCCCEEEEEECCCCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC----CC
T ss_conf 898588887689999389899-----999938992999989999799999578886777763011110111111----11
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEE--ECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 599996999838889713786477986539999178--279959999799994569960467665566899987533345
Q 000316 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1431 (1678)
Q Consensus 1354 tVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~la--S~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~ 1431 (1678)
++..|+....+....+.+|...+.++.|++++..++ +.|+++++||+++++....+..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~------------------ 143 (317)
T d1vyhc1 82 TIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR------------------ 143 (317)
T ss_dssp CCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCC------------------
T ss_conf 10111001111111100000000000016998557765267523575114430346871677------------------
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEC
Q ss_conf 54443345777778378631598306767614997999997899199998889903588617997556787510787508
Q 000316 1432 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1511 (1678)
Q Consensus 1432 ~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~ 1511 (1678)
..+.++++++++..+++++.|+.|++|+..+++.+..+.++. ..+.++++.+
T Consensus 144 ----------------------~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~------~~i~~~~~~~ 195 (317)
T d1vyhc1 144 ----------------------EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHR------HVVECISWAP 195 (317)
T ss_dssp ----------------------SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS------SCEEEEEECC
T ss_pred ----------------------CCCEEEECCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCC------CCCEEEEEEE
T ss_conf ----------------------763000016679999999279829997512540347882477------8733799863
Q ss_pred CCCCCC---------CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCCEEEEEECCCCEEEEE
Q ss_conf 975445---------86557998899994099299996899929999931588769998-08999999995999399998
Q 000316 1512 SEKMQA---------GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWD 1581 (1678)
Q Consensus 1512 ~~~~s~---------dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWD 1581 (1678)
...... ......+..+++|+.|+.|++||.++++++..+.+|...|++++ +|++++|++|+.||+|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd 275 (317)
T d1vyhc1 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 275 (317)
T ss_dssp SCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEEC
T ss_pred CCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEE
T ss_conf 25641110345630343025886147516997899988899968899968899879999879999999997989499999
Q ss_pred CCCCCCCCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEE
Q ss_conf 699998887695058998899--975299999994897-59995
Q 000316 1582 LRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1582 l~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~iwd 1622 (1678)
+.++ +.+.++.+|.+.|++ |++++++|++|+.|+ |++|+
T Consensus 276 ~~~~--~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 276 YKNK--RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp CTTS--CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCCC--CEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf 9999--19999928999889999949999999992899499829
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.2e-36 Score=272.93 Aligned_cols=284 Identities=16% Similarity=0.246 Sum_probs=234.8
Q ss_pred CCCCCCCCEEE--ECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEEC------------------CCCCCEEEEEEE
Q ss_conf 34678991681--0599998899869999199979999689-84268941------------------266647999991
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIR------------------AHHGALRSVAVG 1336 (1678)
Q Consensus 1278 ~~~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~------------------gH~~~V~svafs 1336 (1678)
...+|++.|++ |||||.+ |++|+ |+++++|++. +.++.++. +|...|++++|+
T Consensus 57 ~~~~H~~~V~~l~fs~dg~~-----lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 130 (388)
T d1erja_ 57 KSLDHTSVVCCVKFSNDGEY-----LATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS 130 (388)
T ss_dssp EEEECSSCCCEEEECTTSSE-----EEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC
T ss_pred EECCCCCCEEEEEECCCCCE-----EEEEE-CCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf 60799996899999999999-----99994-9948999813640576631665443244321110146778988999988
Q ss_pred CCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE--EECCCCEEEEECCCCCEEEEECCCCC
Q ss_conf 4999899972178977759999699983888971378647798653999917--82799599997999945699604676
Q 000316 1337 QDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSM 1414 (1678)
Q Consensus 1337 pdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l--aS~DgtIkIWD~~tg~~i~~l~~~~~ 1414 (1678)
|++++|++|+. |++|++|+..+++....+.+|...|.+++|++++..+ ++.|+.+++||..+.........+.
T Consensus 131 ~~~~~l~s~~~----dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~- 205 (388)
T d1erja_ 131 PDGKFLATGAE----DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED- 205 (388)
T ss_dssp TTSSEEEEEET----TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-
T ss_pred CCCCCCEECCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC-
T ss_conf 99980121344----4111121111111111111111111110111111111122210156541011111100001245-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECC
Q ss_conf 65566899987533345544433457777783786315983067676149979999978991999988899035886179
Q 000316 1415 DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1494 (1678)
Q Consensus 1415 ~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~ 1494 (1678)
.. .....+.+++..+++++.|+.|++||..++..+..+...
T Consensus 206 ------------------------------~~---------~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~ 246 (388)
T d1erja_ 206 ------------------------------GV---------TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE 246 (388)
T ss_dssp ------------------------------CE---------EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC--
T ss_pred ------------------------------CC---------CCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEECCC
T ss_conf ------------------------------44---------211236887875899738981999634557300010244
Q ss_pred CC-CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCC------------EEEEEECCCCCEEEEE
Q ss_conf 97-5567875107875089754458655799889999409929999689992------------9999931588769998
Q 000316 1495 PT-ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN------------VIASWRAHDGYVTKLA 1561 (1678)
Q Consensus 1495 ~~-~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~------------~i~~l~gH~~~V~sIa 1561 (1678)
.. ..++...|.+++++ +++.++++|+.||.|++||++++. .......|...|++++
T Consensus 247 ~~~~~~h~~~v~~l~~s-----------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 315 (388)
T d1erja_ 247 NESGTGHKDSVYSVVFT-----------RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA 315 (388)
T ss_dssp ----CCCSSCEEEEEEC-----------TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEE
T ss_pred CCCCCCCCCCEEEEEEC-----------CCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEE
T ss_conf 33345778987899997-----------9999999997899289875157764321013444200110124553278999
Q ss_pred -CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--------EEECCCEEEEEECCC-EEEEECC
Q ss_conf -08999999995999399998699998887695058998899--------975299999994897-5999567
Q 000316 1562 -APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--------FSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1562 -spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--------fSpdg~~LaSgs~D~-I~iwdl~ 1624 (1678)
+|++++|++|+.||+|++||+.++ +.+.++++|.+.|.+ |+|++++|+||+.|+ |++|++.
T Consensus 316 ~s~~~~~l~sg~~dg~i~vwd~~~~--~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 316 TTQNDEYILSGSKDRGVLFWDKKSG--NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp ECGGGCEEEEEETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred ECCCCCEEEEEECCCEEEEEECCCC--CEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEEEE
T ss_conf 8899999999969897999999999--6999996889978999984674258999999999189979997621
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.7e-35 Score=267.30 Aligned_cols=337 Identities=18% Similarity=0.210 Sum_probs=248.2
Q ss_pred CCCCCCCCCCEE-EECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCC
Q ss_conf 023467899168-10599998899869999199979999689-8426894126664799999149998999721789777
Q 000316 1276 TSNLMKCEPWFW-FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1276 ~~~~~gH~~~V~-~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1353 (1678)
..++.||.+.|. ++++++.+ |++||.|++|++||+. +.++.++++|.++|++++|+++ ..+++|+. |+
T Consensus 5 ~~tL~GH~~~vitc~~~~~~~-----l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~----D~ 74 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQFEDNY-----VITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGST----DR 74 (355)
T ss_dssp EEEEECCSSSCEEEEEEETTE-----EEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEET----TC
T ss_pred CEEECCCCCCCEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCC-CEEEEEEC----CC
T ss_conf 588898378869999988999-----999918990999989999399999789998899998699-99999964----52
Q ss_pred EEEEEECCCCEEEEEEECCC--CCEEEEEECCCCCCE--EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 59999699983888971378--647798653999917--82799599997999945699604676655668999875333
Q 000316 1354 TVQKWELTRINCVSGYYGHE--EVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429 (1678)
Q Consensus 1354 tVrIWDl~tg~~l~tl~gH~--~~V~sI~fsp~~~~l--aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~ 1429 (1678)
+|++|+....++......+. ..+....+.+++..+ ++.|++|++||+.++..................+.
T Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~------ 148 (355)
T d1nexb2 75 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE------ 148 (355)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTT------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCC------
T ss_conf 44321111111111110011111111111112322045543888689998567730012465200010000011------
Q ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEE
Q ss_conf 45544433457777783786315983067676149979999978991999988899035886179975567875107875
Q 000316 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1509 (1678)
Q Consensus 1430 ~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~ 1509 (1678)
....................++++.++++..|+.+++||+++++.+....++. ..+.++++
T Consensus 149 -------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~ 209 (355)
T d1nexb2 149 -------------ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT------DRIYSTIY 209 (355)
T ss_dssp -------------TCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS------SCEEEEEE
T ss_pred -------------CCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCC------CCCCCCCC
T ss_conf -------------23401210110022210000256334421144204443013110001100012------33211111
Q ss_pred ECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCC
Q ss_conf 08975445865579988999940992999968999299999315887699980899999999599939999869999888
Q 000316 1510 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQ 1589 (1678)
Q Consensus 1510 ~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIaspdg~~LaSgS~DgtI~IWDl~~~~~~~ 1589 (1678)
. +++..+++++.|+.|++||.+++..+..+.+|...|++++. +++++++|+.||+|++||+.+..
T Consensus 210 ~-----------~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~-~~~~l~~~~~dg~i~iwd~~~~~--- 274 (355)
T d1nexb2 210 D-----------HERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL-SDKFLVSAAADGSIRGWDANDYS--- 274 (355)
T ss_dssp E-----------TTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEE-CSSEEEEECTTSEEEEEETTTCC---
T ss_pred C-----------CCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC-CCCEEEEEECCCCCCCCCCCCCC---
T ss_conf 1-----------21002101245636876301221111111111111111123-21003332011111111111111---
Q ss_pred CEEEECCCCCEE---EEEECCCEEEEEECCCEEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEE
Q ss_conf 769505899889---99752999999948975999567788978961000310234306987657489999944998999
Q 000316 1590 PTVFKGHTNGIS---GFSVWGQDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFL 1666 (1678)
Q Consensus 1590 ~~~l~gH~~~V~---afSpdg~~LaSgs~D~I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLa 1666 (1678)
..+.+|...+. +++++++++++|+++.|++||+. .|+. +.... .+|.+.|++++|+|+ .+++
T Consensus 275 -~~~~~~~~~~~~~~~~~~~~~~l~~g~d~~i~vwd~~-----tg~~------~~~~~--~~~~~~V~~v~~~~~-~~~~ 339 (355)
T d1nexb2 275 -RKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR-----SGKL------VHANI--LKDADQIWSVNFKGK-TLVA 339 (355)
T ss_dssp -EEEEEECTTCCCCCEEEECSSEEEEEETTEEEEEETT-----TCCB------CCSCT--TTTCSEEEEEEEETT-EEEE
T ss_pred -EECCCCCCCCEEEEEECCCCCEEEEEECCEEEEEECC-----CCCE------EEEEE--CCCCCCEEEEEECCC-EEEE
T ss_conf -0001246882299998499989999809979999999-----9979------88884--589998999998399-1999
Q ss_pred EEECCCCEEEC
Q ss_conf 99489839990
Q 000316 1667 VGTEDGYLRLC 1677 (1678)
Q Consensus 1667 tgs~DG~IrIw 1677 (1678)
+++.||.+.||
T Consensus 340 ~~s~dg~~~l~ 350 (355)
T d1nexb2 340 AVEKDGQSFLE 350 (355)
T ss_dssp EEESSSCEEEE
T ss_pred EEECCCCEEEE
T ss_conf 99898909999
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-35 Score=268.92 Aligned_cols=273 Identities=17% Similarity=0.266 Sum_probs=228.7
Q ss_pred CCCCCCCEEE--ECCCCCCCCCCEEEEEECCCCEEEEECCC-C-----EEEEECCCCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 4678991681--05999988998699991999799996898-4-----26894126664799999149998999721789
Q 000316 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-S-----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1678)
Q Consensus 1279 ~~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~g-~-----~l~tl~gH~~~V~svafspdg~~LaSgs~d~~ 1350 (1678)
..+|.+.|++ |||+|.+ |++|+ |+.|++||+.. . ......+|.+.|.+++|+||+++|++|+.
T Consensus 47 ~~~H~~~V~~v~fs~~g~~-----latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~--- 117 (337)
T d1gxra_ 47 TLNHGEVVCAVTISNPTRH-----VYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE--- 117 (337)
T ss_dssp EECCSSCCCEEEECSSSSE-----EEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---
T ss_pred ECCCCCCEEEEEECCCCCE-----EEEEE-CCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC---
T ss_conf 8799992899999899999-----99997-99889977367763311687640488996899998679988988612---
Q ss_pred CCCEEEEEECCC--CEEEEEEECCCCCEEEEEECCCCCCEE--ECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 777599996999--838889713786477986539999178--2799599997999945699604676655668999875
Q 000316 1351 FKGTVQKWELTR--INCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1426 (1678)
Q Consensus 1351 ~DgtVrIWDl~t--g~~l~tl~gH~~~V~sI~fsp~~~~la--S~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~ 1426 (1678)
|++|++||+.. ++....+.+|...|.+++|++++..++ +.|+.|++||..++++......+.
T Consensus 118 -dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~------------- 183 (337)
T d1gxra_ 118 -ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT------------- 183 (337)
T ss_dssp -SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS-------------
T ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------------
T ss_conf -332111111111111111111111111111111111111111111111111111111111111111-------------
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEE
Q ss_conf 33345544433457777783786315983067676149979999978991999988899035886179975567875107
Q 000316 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1678)
Q Consensus 1427 ~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ 1506 (1678)
..++++++++++..+++++.|+.+++||+++++.+..+. +...|.+
T Consensus 184 ---------------------------~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~-------~~~~i~~ 229 (337)
T d1gxra_ 184 ---------------------------DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-------FTSQIFS 229 (337)
T ss_dssp ---------------------------SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-------CSSCEEE
T ss_pred ---------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC-------CCCCEEE
T ss_conf ---------------------------111101234443211223566553211111100000246-------6661579
Q ss_pred EEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 8750897544586557998899994099299996899929999931588769998-089999999959993999986999
Q 000316 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1585 (1678)
Q Consensus 1507 ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~ 1585 (1678)
++++ ++++++++|+.|+.+++||+++++.. ....|...|++++ +|++++|++++.|++|++||+.++
T Consensus 230 l~~~-----------~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~ 297 (337)
T d1gxra_ 230 LGYC-----------PTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEEC-----------TTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEC-----------CCCCCCCEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCCC
T ss_conf 9971-----------53030000002564211111111100-00124565416999899999999948996999989999
Q ss_pred CCCCCEEEECCCCCEE--EEEECCCEEEEEECCC-EEEEEC
Q ss_conf 9888769505899889--9975299999994897-599956
Q 000316 1586 WPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1586 ~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~iwdl 1623 (1678)
..+..+ +|...|. +|+|++++|++|+.|+ |++|++
T Consensus 298 --~~~~~~-~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 298 --ASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp --CEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred --CEEEEC-CCCCCEEEEEEECCCCEEEEEECCCEEEEEEE
T ss_conf --799992-69998799999279999999908996999977
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-35 Score=264.16 Aligned_cols=319 Identities=20% Similarity=0.283 Sum_probs=254.0
Q ss_pred CCCCCCCCCCEE-EECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCC
Q ss_conf 023467899168-10599998899869999199979999689-8426894126664799999149998999721789777
Q 000316 1276 TSNLMKCEPWFW-FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1276 ~~~~~gH~~~V~-~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1353 (1678)
...+.||++.|. +++++|.+ |+|||.|++|++||+. +++++++.+|.+.|.+++|+++ .+++|+. |+
T Consensus 9 ~~~l~GH~~~V~s~~~~~g~~-----l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~----D~ 77 (342)
T d2ovrb2 9 PKVLKGHDDHVITCLQFCGNR-----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGST----DR 77 (342)
T ss_dssp CEEEECSTTSCEEEEEEETTE-----EEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEET----TS
T ss_pred CEEECCCCCCEEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCC--CCCCCEE----CC
T ss_conf 889888687509999978999-----999918990999989999799999488999899994798--6321000----00
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 59999699983888971378647798653999917827995999979999456996046766556689998753334554
Q 000316 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1678)
Q Consensus 1354 tVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1433 (1678)
++++|+............+...+............+..|+++.+|+..+++....+.....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~------------------- 138 (342)
T d2ovrb2 78 TLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA------------------- 138 (342)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSS-------------------
T ss_pred CCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCC-------------------
T ss_conf 1111111100000001233304765202465221234440378740355630011100111-------------------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCC
Q ss_conf 44334577777837863159830676761499799999789919999888990358861799755678751078750897
Q 000316 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1513 (1678)
Q Consensus 1434 ~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~ 1513 (1678)
...........+++++.|+.+++||.+....+..+.++.. .+....
T Consensus 139 -----------------------~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~------~~~~~~----- 184 (342)
T d2ovrb2 139 -----------------------AVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN------RVYSLQ----- 184 (342)
T ss_dssp -----------------------CEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS------CEEEEE-----
T ss_pred -----------------------CCEEECCCCCEEEEECCCCEEEEEECCCCEEEEEECCCCC------CCCCCC-----
T ss_conf -----------------------1000001333024335898699952523436678727544------421006-----
Q ss_pred CCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEE
Q ss_conf 54458655799889999409929999689992999993158876999808999999995999399998699998887695
Q 000316 1514 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVF 1593 (1678)
Q Consensus 1514 ~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l 1593 (1678)
+++..+++|+.||.|++||.++++++..+.+|...+.+++ ++++++++++.|++|++||.... .....+
T Consensus 185 --------~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~-~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~ 253 (342)
T d2ovrb2 185 --------FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME-LKDNILVSGNADSTVKIWDIKTG--QCLQTL 253 (342)
T ss_dssp --------ECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE-EETTEEEEEETTSCEEEEETTTC--CEEEEE
T ss_pred --------CCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEE-CCCCEEEEECCCCEEEEEECCCC--CCCCCC
T ss_conf --------8999999995899399952556536567416653205770-68999999748988999865544--221112
Q ss_pred EC---CCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEE
Q ss_conf 05---8998899975299999994897-5999567788978961000310234306987657489999944998999994
Q 000316 1594 KG---HTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGT 1669 (1678)
Q Consensus 1594 ~g---H~~~V~afSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs 1669 (1678)
.+ |...+.+++++++++++|+.|+ |++||+. .+.... .+.. ....+|...|++++|+|++.++++|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~-----tg~~i~---~~~~-~~~~~~~~~v~~v~~s~~~~~la~g~ 324 (342)
T d2ovrb2 254 QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLK-----TGEFIR---NLVT-LESGGSGGVVWRIRASNTKLVCAVGS 324 (342)
T ss_dssp CSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETT-----TCCEEE---EEEE-CTTGGGTCEEEEEEECSSEEEEEEEC
T ss_pred CCCCEEEECEEECCCCCCEEEEECCCCEEEEEECC-----CCCEEE---EEEC-CCCCCCCCCEEEEEECCCCCEEEEEE
T ss_conf 21000110100001379844999089989999999-----997989---9862-34789889789999879998999996
Q ss_pred CCCC----EEECC
Q ss_conf 8983----99909
Q 000316 1670 EDGY----LRLCC 1678 (1678)
Q Consensus 1670 ~DG~----IrIwd 1678 (1678)
.||+ |++||
T Consensus 325 ~dGt~~~~l~~~D 337 (342)
T d2ovrb2 325 RNGTEETKLLVLD 337 (342)
T ss_dssp SSSSSCCEEEEEE
T ss_pred CCCCCEEEEEEEE
T ss_conf 8999704899993
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.4e-34 Score=261.41 Aligned_cols=285 Identities=18% Similarity=0.239 Sum_probs=225.4
Q ss_pred CEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE--EECCCCE
Q ss_conf 42689412666479999914999899972178977759999699983888971378647798653999917--8279959
Q 000316 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTL 1395 (1678)
Q Consensus 1318 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l--aS~DgtI 1395 (1678)
...++|+||.++|++++|+|++++|+|||. ||+|++||+.+++.+..+.+|...|.+++|+|++..+ ++.|+++
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~----Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i 121 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQ----DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEET----TTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEEEECCCCCCEEEEEECCCCCEEEEEEC----CCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCEE
T ss_conf 652798887898889999899999999978----9955563102102579972465337756760121144310133201
Q ss_pred EEEECCCCCE----EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEE
Q ss_conf 9997999945----699604676655668999875333455444334577777837863159830676761499799999
Q 000316 1396 HVWNSQTGKL----LSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1471 (1678)
Q Consensus 1396 kIWD~~tg~~----i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsg 1471 (1678)
++|+...... ...+..+. . .........+..+...
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~------------------------------~-----------~~~~~~~~~~~~~~~~ 160 (340)
T d1tbga_ 122 SIYNLKTREGNVRVSRELAGHT------------------------------G-----------YLSCCRFLDDNQIVTS 160 (340)
T ss_dssp EEEESSSSCSCCCEEEEECCCS------------------------------S-----------CEEEEEEEETTEEEEE
T ss_pred ECCCCCCCCCCCCCCEECCCCC------------------------------C-----------CCCCCCCCCCCCCCCC
T ss_conf 0133222212221110013542------------------------------1-----------1011111111111111
Q ss_pred ECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
Q ss_conf 78991999988899035886179975567875107875089754458655799889999409929999689992999993
Q 000316 1472 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1678)
Q Consensus 1472 s~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~ 1551 (1678)
..|.....++............. ...+....+. +.+.++++|+.|+.|++||+++++++..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~-----------~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~ 223 (340)
T d1tbga_ 161 SGDTTCALWDIETGQQTTTFTGH------TGDVMSLSLA-----------PDTRLFVSGACDASAKLWDVREGMCRQTFT 223 (340)
T ss_dssp ETTTEEEEEETTTTEEEEEEECC------SSCEEEEEEC-----------TTSSEEEEEETTTEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCC------CEEEEEECCC-----------CCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 24454320012322111112331------0157630012-----------442126876057369999999994889995
Q ss_pred CCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EEEECCCEEEEEECCC-EEEEECCCCC
Q ss_conf 1588769998-0899999999599939999869999888769505899889--9975299999994897-5999567788
Q 000316 1552 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKSA 1627 (1678)
Q Consensus 1552 gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~iwdl~~~~ 1627 (1678)
+|...|++++ +|++++|++|+.|++|++||++............+...+. +|++++++|++|+.|+ |++||+..
T Consensus 224 ~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~-- 301 (340)
T d1tbga_ 224 GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK-- 301 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTT--
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCC--
T ss_conf 788985899997998999999699969997521221111111224457458999989999999997979899999999--
Q ss_pred CCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 978961000310234306987657489999944998999994898399909
Q 000316 1628 DEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1628 ~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+.. ..... +|.+.|++++|+|++++|++|+.||+|++||
T Consensus 302 ---~~~-------~~~~~--~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 302 ---ADR-------AGVLA--GHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ---CCE-------EEEEC--CCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ---CCE-------EEEEC--CCCCCEEEEEEECCCCEEEEECCCCEEEEEC
T ss_conf ---939-------89984--8999789999908999999990699799859
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.4e-34 Score=263.14 Aligned_cols=268 Identities=19% Similarity=0.197 Sum_probs=217.4
Q ss_pred EEECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEE
Q ss_conf 810599998899869999199979999689-8426894126664799999149998999721789777599996999838
Q 000316 1287 WFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1678)
Q Consensus 1287 ~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~ 1365 (1678)
.+++|+|.. ++.++ ++.+.+|+++ ......+.+|.+.|++++|+|+|++|++|+. |++|++||+.+++.
T Consensus 23 ~a~~~~g~~-----l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~----dg~i~iwd~~~~~~ 92 (311)
T d1nr0a1 23 LGNTPAGDK-----IQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV----HGNVRIWDTTQTTH 92 (311)
T ss_dssp CEECTTSSE-----EEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEET----TSEEEEEESSSTTC
T ss_pred EEECCCCCE-----EEEEE-CCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEECCCC----CCEEEEEEEECCCC
T ss_conf 999699899-----99996-999999999999661797478888899999489996722556----73674663101111
Q ss_pred E--EEEECCCCCEEEEEECCCCCCEEEC----CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8--8971378647798653999917827----995999979999456996046766556689998753334554443345
Q 000316 1366 V--SGYYGHEEVVNDICVLSSSGRIASC----DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNS 1439 (1678)
Q Consensus 1366 l--~tl~gH~~~V~sI~fsp~~~~laS~----DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~ 1439 (1678)
. ..+.+|.+.|.+++|++++..++++ |..+++|+.++++....+..|
T Consensus 93 ~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h--------------------------- 145 (311)
T d1nr0a1 93 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQ--------------------------- 145 (311)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCC---------------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------------------
T ss_conf 00001343357543323331110001111221111111111111111111111---------------------------
Q ss_pred CCCCCCEEEEEECCCCEEEEEEECCCC-EEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCC
Q ss_conf 777778378631598306767614997-9999978991999988899035886179975567875107875089754458
Q 000316 1440 NTLSSGILSTAFDGNLYTCLHHIECVE-RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAG 1518 (1678)
Q Consensus 1440 ~~~s~~i~sv~f~~~~vt~ia~sp~g~-~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~d 1518 (1678)
... +++++++|+++ .+++|+.|++|++||+++++....+..| ...|.+++++
T Consensus 146 ---~~~----------v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~------~~~i~~v~~~-------- 198 (311)
T d1nr0a1 146 ---ARA----------MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH------TKFVHSVRYN-------- 198 (311)
T ss_dssp ---SSC----------EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC------SSCEEEEEEC--------
T ss_pred ---CCC----------CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCC--------
T ss_conf ---111----------1111112111012000112211111111111111111111------1111112347--------
Q ss_pred CCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE-------CCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf 655799889999409929999689992999993-------1588769998-08999999995999399998699998887
Q 000316 1519 GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-------AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQP 1590 (1678)
Q Consensus 1519 g~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~-------gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~ 1590 (1678)
|+++++++|+.|+.|++||.+++..+..+. +|...|++++ +|++++|++|+.||+|++||++++ +.+
T Consensus 199 ---p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~--~~~ 273 (311)
T d1nr0a1 199 ---PDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL--KVE 273 (311)
T ss_dssp ---TTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--EEE
T ss_pred ---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC--CEE
T ss_conf ---642212111111111000124464112221111111002465321024788999999937996999999999--699
Q ss_pred EEEECCCC---CEEEEEECCCEEEEEECCC-EEEEEC
Q ss_conf 69505899---8899975299999994897-599956
Q 000316 1591 TVFKGHTN---GISGFSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1591 ~~l~gH~~---~V~afSpdg~~LaSgs~D~-I~iwdl 1623 (1678)
.++..|.. .+.++.++++.+++++.|| |++||.
T Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~ 310 (311)
T d1nr0a1 274 KTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNP 310 (311)
T ss_dssp EEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEET
T ss_pred EEEECCCCCCCEEEEEEECCCEEEEEECCCEEEEEEC
T ss_conf 9997999863329999951999999989997999958
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.1e-39 Score=295.40 Aligned_cols=154 Identities=17% Similarity=0.255 Sum_probs=132.9
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||+||+|+++.. ......||+|.+... .......+++ +|+.+|+.++|||||++
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~---~~~~~~vavK~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~l 92 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLP---GKREIFVAIKTLKSG-YTEKQRRDFL--------SEASIMGQFDHPNVIHL 92 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC------CCEEEEEEECCSS-CCHHHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEEECC---CCEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 00427856980278829999999579---978899999997844-5989999999--------99999985799888618
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++..++.+|+|||||+| +|.+++.. ..+.+++..+..++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 93 ~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~--~~Kl 169 (299)
T d1jpaa_ 93 EGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL--VCKV 169 (299)
T ss_dssp EEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEEECCCCCCEEEECC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--CEEE
T ss_conf 9999628877999972279853002104-567999999999999999988988527983576150448988999--1998
Q ss_pred EECCCCCCCC
Q ss_conf 7268854478
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlar~~~ 329 (1678)
+|||+|+...
T Consensus 170 ~DFGla~~~~ 179 (299)
T d1jpaa_ 170 SDFGLSRFLE 179 (299)
T ss_dssp CCC-------
T ss_pred CCCCCCEECC
T ss_conf 8844315756
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.2e-34 Score=261.69 Aligned_cols=319 Identities=12% Similarity=0.063 Sum_probs=215.1
Q ss_pred EECCCCCCCCCCEEEEEECCCCEEEEECC-CC--EEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCE
Q ss_conf 10599998899869999199979999689-84--2689412666479999914999899972178977759999699983
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-AS--ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~--~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~ 1364 (1678)
+|||+|.. |++|+.|+.|++|+.. +. ++..++||.++|++++|+|++++|++||. |++|++||+.++.
T Consensus 14 ~~s~dg~~-----la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~----D~~i~vWd~~~~~ 84 (371)
T d1k8kc_ 14 AWNKDRTQ-----IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT----DRNAYVWTLKGRT 84 (371)
T ss_dssp EECTTSSE-----EEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET----TSCEEEEEEETTE
T ss_pred EECCCCCE-----EEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC----CCEEEEEEECCCC
T ss_conf 99899999-----99994889899998889978999995588998889999799999999979----9939998620332
Q ss_pred EE--EEEECCCCCEEEEEECCCCCCE--EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88--8971378647798653999917--8279959999799994569960467665566899987533345544433457
Q 000316 1365 CV--SGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440 (1678)
Q Consensus 1365 ~l--~tl~gH~~~V~sI~fsp~~~~l--aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~ 1440 (1678)
.. ..+.+|...|++++|+|++..+ ++.|++|++|+.............. .
T Consensus 85 ~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~--------------------------~ 138 (371)
T d1k8kc_ 85 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK--------------------------K 138 (371)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC--------------------------T
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCC--------------------------C
T ss_conf 11001223221100011111112110000025763025442033433111001--------------------------0
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECC------------CCCCCCCCCCEEEE
Q ss_conf 777783786315983067676149979999978991999988899035886179------------97556787510787
Q 000316 1441 TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE------------PTELGFPSLVSAIC 1508 (1678)
Q Consensus 1441 ~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~------------~~~v~~~~~V~~ia 1508 (1678)
.+. ..+++++++|++..+++|+.|+++++||............. ....++...+.+++
T Consensus 139 ~~~----------~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 208 (371)
T d1k8kc_ 139 PIR----------STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 208 (371)
T ss_dssp TCC----------SCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEE
T ss_pred CCC----------CCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE
T ss_conf 111----------2221111111111100013476799984015764310012211111111011244047667478987
Q ss_pred EECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 50897544586557998899994099299996899929999931588769998-08999999995999399998699998
Q 000316 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP 1587 (1678)
Q Consensus 1509 ~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~ 1587 (1678)
|+ |+++.+++|+.|+.|++||..++..+..+.+|..+|++++ +|++.++++|+ |+.+++|.....
T Consensus 209 ~s-----------~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~-- 274 (371)
T d1k8kc_ 209 FS-----------ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSA-- 274 (371)
T ss_dssp EC-----------SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETT--
T ss_pred EE-----------CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEEEC-CCCEEEEEEECC--
T ss_conf 51-----------2332100001478605886410121000001466520365469997999981-992678776089--
Q ss_pred CCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCC----
Q ss_conf 887695058998899975299999994897-599956778897896100031023430698765748999994499----
Q 000316 1588 SQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFS---- 1662 (1678)
Q Consensus 1588 ~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~---- 1662 (1678)
.....+.++.+........+ .+... ...++.. ....+... .... ....|.+.|+++++++.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~-~~~~-----~~~~H~~~I~~i~~~~~~~~~~ 341 (371)
T d1k8kc_ 275 AGKLSFGGRLDVPKQSSQRG-----LTARERFQNLDKK--ASSEGSAA-AGAG-----LDSLHKNSVSQISVLSGGKAKC 341 (371)
T ss_dssp TTEEEECCCCCCC-------------CHHHHHHHCCCC--C----------CC-----CSSSSSSCEEEEEEEESTTTSC
T ss_pred CCEEEEEEEECCCCCCCCCC-----CCCEEEEECCCCE--EEEECCCC-CCCE-----ECCCCCCCEEEEEEECCCCCCE
T ss_conf 86288720206765421246-----2200168506520--58712455-6614-----1255569889999948998656
Q ss_pred CEEEEEECCCCEEECC
Q ss_conf 8999994898399909
Q 000316 1663 RLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1663 ~lLatgs~DG~IrIwd 1678 (1678)
..|+|+|.||.|++|+
T Consensus 342 ~~~~T~g~Dg~v~iW~ 357 (371)
T d1k8kc_ 342 SQFCTTGMDGGMSIWD 357 (371)
T ss_dssp SEEEEEETTSEEEEEE
T ss_pred EEEEEECCCCEEEEEE
T ss_conf 7999991899399996
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.3e-39 Score=295.97 Aligned_cols=150 Identities=19% Similarity=0.207 Sum_probs=134.3
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.++||+|+||+||+|+++ .++..||+|+++.+... ..+++ +|+.+|+.++|||||++
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~---~~~~~--------~E~~il~~l~HpnIv~~ 78 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDTME---VEEFL--------KEAAVMKEIKHPNLVQL 78 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEG------GGTEEEEEEECCTTCSC---HHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEEC------CCCEEEEEEEECCCCCH---HHHHH--------HHHHHHHHCCCCCEECC
T ss_conf 799398659820888089999999------99969999997776103---99999--------99999986799988267
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 169993896778513899-9988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++.+.+.+|+|||||+ |+|.+++.......+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 79 ~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~--~~Kl 156 (287)
T d1opja_ 79 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKV 156 (287)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEE
T ss_pred CCCEEECCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--CEEE
T ss_conf 75274578547876314676067775303554157999999999999978889878930576045768998999--2898
Q ss_pred EECCCCCCCC
Q ss_conf 7268854478
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlar~~~ 329 (1678)
+|||+|+...
T Consensus 157 ~DFG~a~~~~ 166 (287)
T d1opja_ 157 ADFGLSRLMT 166 (287)
T ss_dssp CCCCCTTTCC
T ss_pred CCCCCEEECC
T ss_conf 3244546537
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-38 Score=291.65 Aligned_cols=180 Identities=17% Similarity=0.119 Sum_probs=139.8
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCCC
Q ss_conf 789667633543272799999963777745562099999821577672778999985089935588851028-9876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|+++++||+|+||+||+|++... +.......||+|.+.... .......++ +|+.+|..+ +|||||+
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~-~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~HpnIv~ 105 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYGI-SKTGVSIQVAVKMLKEKA-DSSEREALM--------SELKMMTQLGSHENIVN 105 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESC-SSSSCEEEEEEEEECC-------CHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEECCC-CCCCCEEEEEEEEECCCC-CHHHHHHHH--------HHHHHHHHHCCCCCEEE
T ss_conf 89939701983078819999998578-855420499999966335-878999999--------99999997158996868
Q ss_pred EEEEEEECCEEEEECCCCC-CCHHHHHHHCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 3169993896778513899-998889861999---------------------988799999999999999999894892
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPN---------------------ALKSEWHVRFLMYQLLSAIAYLHSLGI 297 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~---------------------~~l~~~~i~~i~~qil~aL~yLH~~~I 297 (1678)
+++++.+.+.+|+|||||+ |+|.++++..+. ..+++..++.++.||+.||.|||+++|
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I 185 (325)
T d1rjba_ 106 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 185 (325)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 77888629958999972799959999986257775102210000122200125778999999999999999999973990
Q ss_pred EECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 2068998973755799415999726885447888864466888842000244567642100012
Q 000316 298 AHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 298 iHRDLKP~NILl~~~g~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
+||||||+|||++.++ .+||+|||+|+......... ......||+.|||||++
T Consensus 186 iHRDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~~---------~~~~~~gt~~y~aPE~l 238 (325)
T d1rjba_ 186 VHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNYV---------VRGNARLPVKWMAPESL 238 (325)
T ss_dssp EETTCSGGGEEEETTT--EEEECCCGGGSCGGGCTTSE---------EETTEEECGGGCCHHHH
T ss_pred EECCCCHHCCCCCCCC--EEEEEECCCCCCCCCCCCEE---------EECCCCCCCCCCCHHHH
T ss_conf 5052703214434598--28985142222045778615---------62343578765783887
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.9e-33 Score=252.50 Aligned_cols=278 Identities=18% Similarity=0.245 Sum_probs=233.4
Q ss_pred CCCCCCCCCEEE--ECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCC
Q ss_conf 234678991681--0599998899869999199979999689-8426894126664799999149998999721789777
Q 000316 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1277 ~~~~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1353 (1678)
.++.||.+.|++ |+|++.+ |++||.|+++++||.. +..+.++.+|.+.|.+++|+|++.++++|+. |+
T Consensus 49 ~tL~GH~~~I~~l~~s~~~~~-----l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~----d~ 119 (340)
T d1tbga_ 49 RTLRGHLAKIYAMHWGTDSRL-----LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL----DN 119 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSE-----EEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEET----TC
T ss_pred EEECCCCCCEEEEEECCCCCE-----EEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEECC----CC
T ss_conf 798887898889999899999-----999978995556310210257997246533775676012114431013----32
Q ss_pred EEEEEECCCC----EEEEEEECCCCCEEEEEECCCCCCE-EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 5999969998----3888971378647798653999917-8279959999799994569960467665566899987533
Q 000316 1354 TVQKWELTRI----NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428 (1678)
Q Consensus 1354 tVrIWDl~tg----~~l~tl~gH~~~V~sI~fsp~~~~l-aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1428 (1678)
++++|+.... .....+.+|................ ...|.+...|+..............
T Consensus 120 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 184 (340)
T d1tbga_ 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT--------------- 184 (340)
T ss_dssp CEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCS---------------
T ss_pred EEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------
T ss_conf 01013322221222111001354211011111111111111244543200123221111123310---------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEE
Q ss_conf 34554443345777778378631598306767614997999997899199998889903588617997556787510787
Q 000316 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1678)
Q Consensus 1429 ~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia 1508 (1678)
..+.+....+.+..+++++.|+.|++||+++++++.++.+| ...|.+++
T Consensus 185 -------------------------~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h------~~~i~~v~ 233 (340)
T d1tbga_ 185 -------------------------GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH------ESDINAIC 233 (340)
T ss_dssp -------------------------SCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCC------SSCEEEEE
T ss_pred -------------------------EEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECC------CCCEEEEE
T ss_conf -------------------------15763001244212687605736999999999488999578------89858999
Q ss_pred EECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE--CCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 5089754458655799889999409929999689992999993--1588769998-089999999959993999986999
Q 000316 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR--AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1585 (1678)
Q Consensus 1509 ~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~--gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~ 1585 (1678)
++ |++.++++|+.||.|++||.+....+..+. .+...|++++ +|++++|++|+.||+|++||+.++
T Consensus 234 ~~-----------p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~ 302 (340)
T d1tbga_ 234 FF-----------PNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp EC-----------TTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTC
T ss_pred EC-----------CCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCC
T ss_conf 97-----------9989999996999699975212211111112244574589999899999999979798999999999
Q ss_pred CCCCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEE
Q ss_conf 98887695058998899--975299999994897-59995
Q 000316 1586 WPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1586 ~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~iwd 1622 (1678)
..+..+.+|.+.|++ |+|++++|+||+.|+ |++||
T Consensus 303 --~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 303 --DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp --CEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --CEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEEEEC
T ss_conf --39899848999789999908999999990699799859
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-37 Score=285.51 Aligned_cols=152 Identities=16% Similarity=0.211 Sum_probs=129.1
Q ss_pred CCCEEEEE-EEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 78966763-35432727999999637777455620999998215776727789999850899355888510289876133
Q 000316 161 MTALFPIA-FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~-~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
.++|.+.+ +||+|+||+||+|.++. ..++..||||.++.. .......+++ +|+.+|+.++|||||+
T Consensus 7 ~~~~~~~~~~iG~G~fg~Vy~~~~~~----~~~~~~vAvK~l~~~-~~~~~~~~~~--------~E~~il~~l~HpnIv~ 73 (285)
T d1u59a_ 7 RDNLLIADIELGCGNFGSVRQGVYRM----RKKQIDVAIKVLKQG-TEKADTEEMM--------REAQIMHQLDNPYIVR 73 (285)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC-------CCEEEEEEEECSS-CCHHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred CCCEEECCCEEECCCCEEEEEEEEEC----CCCCEEEEEEEECHH-CCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 44718878487306080999999960----897689999998820-3978999999--------9999998679988806
Q ss_pred EEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 31699938967785138999-98889861999988799999999999999999894892206899897375579941599
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
+++++.+ +.+|+|||||+| +|.+++.. .+..+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 74 l~g~~~~-~~~~lvmE~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~--~~K 149 (285)
T d1u59a_ 74 LIGVCQA-EALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH--YAK 149 (285)
T ss_dssp EEEEEES-SSEEEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT--EEE
T ss_pred EEEEECC-CEEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEE
T ss_conf 8656036-807999980789968997521-256999999999999999987899868810576764660454688--542
Q ss_pred EEECCCCCCCC
Q ss_conf 97268854478
Q 000316 319 ICDKPLVGFNS 329 (1678)
Q Consensus 319 I~DFGlar~~~ 329 (1678)
|+|||+|+...
T Consensus 150 l~DFGla~~~~ 160 (285)
T d1u59a_ 150 ISDFGLSKALG 160 (285)
T ss_dssp ECCCTTCEECT
T ss_pred ECCCHHHHCCC
T ss_conf 03313421155
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=3.5e-33 Score=252.85 Aligned_cols=287 Identities=14% Similarity=0.163 Sum_probs=215.8
Q ss_pred CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEE-CCCCCEEEEEECCCCCCE-EECCCC
Q ss_conf 842689412666479999914999899972178977759999699983888971-378647798653999917-827995
Q 000316 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI-ASCDGT 1394 (1678)
Q Consensus 1317 g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~-gH~~~V~sI~fsp~~~~l-aS~Dgt 1394 (1678)
|.+.+++.||.++|++++|+||+++|+||+. |++|++||+.++++...+. +|...|++++|++++..+ ++.|++
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~----Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~ 77 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGKTLFSADA----EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDH 77 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTE
T ss_pred CCCCEECCCCCCCCEEEEECCCCCEEEEECC----CCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCEEECCCCEEE
T ss_conf 8613684888878289999799999999908----992999999999688998378877489988403311210231026
Q ss_pred EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC
Q ss_conf 99997999945699604676655668999875333455444334577777837863159830676761499799999789
Q 000316 1395 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1474 (1678)
Q Consensus 1395 IkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D 1474 (1678)
+++|+....... .... .... ....+.++++++++..+++++ +
T Consensus 78 v~~~~~~~~~~~-~~~~--------------------------~~~~----------~~~~~~~~~~s~~g~~~~~~~-~ 119 (299)
T d1nr0a2 78 LKVVPAGGSGVD-SSKA--------------------------VANK----------LSSQPLGLAVSADGDIAVAAC-Y 119 (299)
T ss_dssp EEEECSSSSSSC-TTSC--------------------------CEEE----------CSSCEEEEEECTTSSCEEEEE-S
T ss_pred EEEECCCCCCCC-CCCC--------------------------CCCC----------CCCCCCCCCCCCCCCCCCCCC-C
T ss_conf 887316776201-1100--------------------------0111----------134432100112211111222-2
Q ss_pred CCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEE-EEECC
Q ss_conf 91999988899035886179975567875107875089754458655799889999409929999689992999-99315
Q 000316 1475 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA-SWRAH 1553 (1678)
Q Consensus 1475 gtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~-~l~gH 1553 (1678)
+.+++|+... ...... ...+.+++++ ++++.+++|+.||.|++||+++++... ....|
T Consensus 120 ~~i~~~~~~~--~~~~~~--------~~~~~~~~~s-----------~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~ 178 (299)
T d1nr0a2 120 KHIAIYSHGK--LTEVPI--------SYNSSCVALS-----------NDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVH 178 (299)
T ss_dssp SEEEEEETTE--EEEEEC--------SSCEEEEEEC-----------TTSCEEEEEETTSEEEEEEEETTEEEEEEEEEC
T ss_pred CCCCCCCCCC--CCCCCC--------CCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 2221111111--111011--------1123322111-----------111111111111111111111111111111111
Q ss_pred CCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCC-CCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEECCCCCC
Q ss_conf 88769998-08999999995999399998699998-887695058998899--975299999994897-59995677889
Q 000316 1554 DGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWP-SQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSAD 1628 (1678)
Q Consensus 1554 ~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~-~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~iwdl~~~~~ 1628 (1678)
...|++++ +|++.++++++.|+.|++||+.++.. .....+.+|...|.+ |+|+++++++|+.|+ |++|++.....
T Consensus 179 ~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~ 258 (299)
T d1nr0a2 179 PAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD 258 (299)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCC
T ss_conf 11111111111111111111111111111111111111111111111111112466645138882899799998999973
Q ss_pred CCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 78961000310234306987657489999944998999994898399909
Q 000316 1629 EDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1629 ~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
. ... .....+...++++.| ++++.|++|+.||+|++|+
T Consensus 259 ---~------~~~--~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWd 296 (299)
T d1nr0a2 259 ---H------PII--IKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWN 296 (299)
T ss_dssp ---C------CEE--ETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEE
T ss_pred ---C------EEE--EECCCCCCCEEEEEE-CCCCEEEEEECCCEEEEEE
T ss_conf ---1------489--834898896899997-7989999992899799994
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-37 Score=285.16 Aligned_cols=145 Identities=18% Similarity=0.206 Sum_probs=124.7
Q ss_pred EEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEEEEEC
Q ss_conf 33543272799999963777745562099999821577672778999985089935588851028987613331699938
Q 000316 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1678)
Q Consensus 168 ~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l~~~~~~~ 247 (1678)
++||+|+||+||+|.... ...+..||+|.++..........+++ +|+.+|+.++|||||++++++.++
T Consensus 13 k~iG~G~fG~Vy~~~~~~----~~~~~~vAvK~~~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~~g~~~~~ 80 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQM----KKVVKTVAVKILKNEANDPALKDELL--------AEANVMQQLDNPYIVRMIGICEAE 80 (277)
T ss_dssp EEEEECSSEEEEEEEEEC----SSSEEEEEEEEEC-----CHHHHHHH--------HHHHHHHTCCCTTBCCEEEEEESS
T ss_pred CCCCCCCCEEEEEEEECC----CCCCEEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCCCEEEEEECCC
T ss_conf 783458782999999816----97385999999880108989999999--------999999867998985277775059
Q ss_pred CEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEECCCCC
Q ss_conf 967785138999-9888986199998879999999999999999989489220689989737557994159997268854
Q 000316 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 248 ~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI~DFGlar 326 (1678)
..|+|||||++ +|.++++ ....+++..+..++.||+.||.|||+++|+||||||+|||++.++ .+||+|||+|+
T Consensus 81 -~~~lvmE~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~--~~kl~DFGla~ 155 (277)
T d1xbba_ 81 -SWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH--YAKISDFGLSK 155 (277)
T ss_dssp -SEEEEEECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCE
T ss_pred -CEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC--CCCCCCHHHHH
T ss_conf -7799997478896899975--225789999999999999997668747955677761131023567--51234134533
Q ss_pred CCC
Q ss_conf 478
Q 000316 327 FNS 329 (1678)
Q Consensus 327 ~~~ 329 (1678)
...
T Consensus 156 ~~~ 158 (277)
T d1xbba_ 156 ALR 158 (277)
T ss_dssp ECC
T ss_pred HCC
T ss_conf 134
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9.2e-33 Score=249.80 Aligned_cols=277 Identities=13% Similarity=0.129 Sum_probs=216.6
Q ss_pred CCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEE--ECCCCEEEEECCCC
Q ss_conf 6664799999149998999721789777599996999838889713786477986539999178--27995999979999
Q 000316 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTG 1403 (1678)
Q Consensus 1326 H~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~la--S~DgtIkIWD~~tg 1403 (1678)
+.+.+.+++++|+|+.++.++ ++.|.+|++.+++....+.+|.+.|++++|+|++.+++ +.||+|++||+.++
T Consensus 16 ~r~~~~~~a~~~~g~~l~~~~-----~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~ 90 (311)
T d1nr0a1 16 ARGTAVVLGNTPAGDKIQYCN-----GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQT 90 (311)
T ss_dssp CTTCCCCCEECTTSSEEEEEE-----TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSST
T ss_pred CCCCEEEEEECCCCCEEEEEE-----CCEEEEEECCCCCEEEEECCCCCCEEEEEEECCCCEEECCCCCCEEEEEEEECC
T ss_conf 788759999969989999996-----999999999999661797478888899999489996722556736746631011
Q ss_pred CEE--EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC--CCEEE
Q ss_conf 456--99604676655668999875333455444334577777837863159830676761499799999789--91999
Q 000316 1404 KLL--SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN--GSLRF 1479 (1678)
Q Consensus 1404 ~~i--~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D--gtIki 1479 (1678)
+.. ..+..| .. .+.+++|+++++.+++++.+ ..+++
T Consensus 91 ~~~~~~~~~~~------------------------------~~----------~v~~v~~s~d~~~l~~~~~~~~~~~~v 130 (311)
T d1nr0a1 91 THILKTTIPVF------------------------------SG----------PVKDISWDSESKRIAAVGEGRERFGHV 130 (311)
T ss_dssp TCCEEEEEECS------------------------------SS----------CEEEEEECTTSCEEEEEECCSSCSEEE
T ss_pred CCCCCCCCCCC------------------------------CC----------CCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 11000013433------------------------------57----------543323331110001111221111111
Q ss_pred EECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEE
Q ss_conf 98889903588617997556787510787508975445865579988999940992999968999299999315887699
Q 000316 1480 IDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTK 1559 (1678)
Q Consensus 1480 WDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~s 1559 (1678)
|+..+++...++.+| ...|.+++|++... ..+++|+.|+.|++||.++++....+.+|...|++
T Consensus 131 ~~~~~~~~~~~l~~h------~~~v~~v~~~~~~~----------~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~ 194 (311)
T d1nr0a1 131 FLFDTGTSNGNLTGQ------ARAMNSVDFKPSRP----------FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS 194 (311)
T ss_dssp EETTTCCBCBCCCCC------SSCEEEEEECSSSS----------CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEE
T ss_pred CCCCCCCCCCCCCCC------CCCCCCCCCCCCCE----------EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 111111111111111------11111111121110----------12000112211111111111111111111111111
Q ss_pred EE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEE-------EECCCCCEEE--EEECCCEEEEEECCC-EEEEECCCCCC
Q ss_conf 98-0899999999599939999869999888769-------5058998899--975299999994897-59995677889
Q 000316 1560 LA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTV-------FKGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSAD 1628 (1678)
Q Consensus 1560 Ia-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~-------l~gH~~~V~a--fSpdg~~LaSgs~D~-I~iwdl~~~~~ 1628 (1678)
+. +|+++++++++.|+.|++||..++. .... ..+|.+.|.+ |+|++++|++|+.|+ |++||+.
T Consensus 195 v~~~p~~~~l~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~---- 268 (311)
T d1nr0a1 195 VRYNPDGSLFASTGGDGTIVLYNGVDGT--KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA---- 268 (311)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCC--EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT----
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECC----
T ss_conf 2347642212111111111000124464--1122211111110024653210247889999999379969999999----
Q ss_pred CCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 78961000310234306987657489999944998999994898399909
Q 000316 1629 EDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1629 ~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.+.. .+.+. .+......+.++.| ++..|++++.||.|++||
T Consensus 269 -t~~~----~~~l~--~~~~~~~~~~~~~~--~~~~l~s~s~dG~i~~wd 309 (311)
T d1nr0a1 269 -TLKV----EKTIP--VGTRIEDQQLGIIW--TKQALVSISANGFINFVN 309 (311)
T ss_dssp -TTEE----EEEEE--CCSSGGGCEEEEEE--CSSCEEEEETTCCEEEEE
T ss_pred -CCCE----EEEEE--CCCCCCCEEEEEEE--CCCEEEEEECCCEEEEEE
T ss_conf -9969----99997--99986332999995--199999998999799995
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.8e-36 Score=272.63 Aligned_cols=196 Identities=14% Similarity=0.119 Sum_probs=150.8
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC-------
Q ss_conf 7896676335432727999999637777455620999998215776727789999850899355888510289-------
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR------- 233 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~------- 233 (1678)
.++|+++++||+|+||+||+|++. .++..||||++++... ...... +|+.+++.++
T Consensus 12 ~~rY~i~~~LG~G~fg~Vy~~~~~------~~g~~vAvKvi~~~~~---~~~~~~--------~Ei~~l~~l~~~~~~~~ 74 (362)
T d1q8ya_ 12 DARYILVRKLGWGHFSTVWLAKDM------VNNTHVAMKIVRGDKV---YTEAAE--------DEIKLLQRVNDADNTKE 74 (362)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSCHH---HHHHHH--------HHHHHHHHHHHTCCSHH
T ss_pred CCCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEECCCC---CHHHHH--------HHHHHHHHHCCHHHHHH
T ss_conf 785799899750778189999999------9997999999834313---368999--------99999998401455555
Q ss_pred ----CCCCCCEEEEEEEC--CEEEEECCCCC--CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCC
Q ss_conf ----87613331699938--96778513899--998889861999988799999999999999999894-8922068998
Q 000316 234 ----HPNVAPVLGLLKTS--GLITSVIPKTP--YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCP 304 (1678)
Q Consensus 234 ----HpNIV~l~~~~~~~--~~l~lV~E~~~--g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~-~~IiHRDLKP 304 (1678)
|+||+++++++... ...+++++++. +.............+++..++.++.||+.||.|||+ +||+||||||
T Consensus 75 ~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp 154 (362)
T d1q8ya_ 75 DSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKP 154 (362)
T ss_dssp HHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSG
T ss_pred HHCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 42276764789987631256520234320003542000001223467868999999999999988876405864656770
Q ss_pred CCEEECCCCC----EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 9737557994----159997268854478888644668888420002445676421000122333322222233476520
Q 000316 305 SNVLLTDSCW----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSN 380 (1678)
Q Consensus 305 ~NILl~~~g~----~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~~~~~~~d~W~~G~isn 380 (1678)
+|||++.++. ..+|++|||.|+...... ....|++.|+|||++....|+.++|+|+.|++
T Consensus 155 ~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~--------------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i-- 218 (362)
T d1q8ya_ 155 ENVLMEIVDSPENLIQIKIADLGNACWYDEHY--------------TNSIQTREYRSPEVLLGAPWGCGADIWSTACL-- 218 (362)
T ss_dssp GGEEEEEEETTTTEEEEEECCCTTCEETTBCC--------------CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHH--
T ss_pred HHEEEECCCCCCCCCEEEEEECCCCCCCCCCC--------------CCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHH--
T ss_conf 57056305765644305675314421234454--------------22366521057132146677764320123789--
Q ss_pred HHHHHHHCCCCCCC
Q ss_conf 46676520256999
Q 000316 381 FEYLLFLNKLAGRR 394 (1678)
Q Consensus 381 feyl~~ln~~agrs 394 (1678)
.+.++.|+.
T Consensus 219 -----l~el~~g~~ 227 (362)
T d1q8ya_ 219 -----IFELITGDF 227 (362)
T ss_dssp -----HHHHHHSSC
T ss_pred -----HHHHHHCCC
T ss_conf -----999987889
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-37 Score=284.27 Aligned_cols=172 Identities=17% Similarity=0.174 Sum_probs=139.3
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|++. ++..||||++....... .+++ +|+.+++.++|||||++
T Consensus 4 p~~~~~~~~iG~G~fg~Vy~~~~~-------~~~~vAvK~i~~~~~~~---~~~~--------~E~~~l~~l~HpnIv~~ 65 (263)
T d1sm2a_ 4 PSELTFVQEIGSGQFGLVHLGYWL-------NKDKVAIKTIREGAMSE---EDFI--------EEAEVMMKLSHPKLVQL 65 (263)
T ss_dssp CSCEEEEEEEECCSSCCEEEEEET-------TTEEEEEEECCSSSSCH---HHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEEC-------CCCEEEEEEECCCCCCH---HHHH--------HHHHHHHHCCCCCCCCC
T ss_conf 699588889820888299999988-------99999999987886768---9999--------99999996689975653
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 169993896778513899-9988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++..++.+|+|||||+ |+|.+++.. ....+++..+..++.|++.||.|+|+++|+||||||+|||++.++ .+||
T Consensus 66 ~g~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~--~~Kl 142 (263)
T d1sm2a_ 66 YGVCLEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKV 142 (263)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGG--CEEE
T ss_pred CCEECCCCCEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCC--CEEE
T ss_conf 5243159933799983699918997520-134788999999999999987765316431044315326666887--7686
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 72688544788886446688884200024456764210001223
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS 363 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~ 363 (1678)
+|||+|+......... .....||+.|+|||++.+
T Consensus 143 ~DFGla~~~~~~~~~~----------~~~~~gt~~y~aPE~l~~ 176 (263)
T d1sm2a_ 143 SDFGMTRFVLDDQYTS----------STGTKFPVKWASPEVFSF 176 (263)
T ss_dssp CSCC----------------------------CTTSCCHHHHTT
T ss_pred CCCCHHEECCCCCCEE----------ECCEECCCCCCCHHHHCC
T ss_conf 5532100236887335----------043001766678578607
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.4e-36 Score=277.61 Aligned_cols=151 Identities=17% Similarity=0.138 Sum_probs=132.3
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHH-HHHHHHCCCCCHHHHHHHCCCCCCCCC
Q ss_conf 3789667633543272799999963777745562099999821577672778-999985089935588851028987613
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~-~~~l~~~~~~al~Ei~iL~~l~HpNIV 238 (1678)
..++|++.+.||+|+||+||+|++. .+++.||+|.+.+........ ..+. +|+.+|+.++|||||
T Consensus 5 l~drY~i~~~lG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~--------~E~~~l~~~~hpniv 70 (277)
T d1o6ya_ 5 LSDRYELGEILGFGGMSEVHLARDL------RLHRDVAVKVLRADLARDPSFYLRFR--------REAQNAAALNHPAIV 70 (277)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSTTTTCHHHHHHHH--------HHHHHHHTCCCTTBC
T ss_pred CCCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 0620698689960899299999999------99989999998556646989999999--------999999856999887
Q ss_pred CEEEEEEECC----EEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCC
Q ss_conf 3316999389----67785138999-988898619999887999999999999999998948922068998973755799
Q 000316 239 PVLGLLKTSG----LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1678)
Q Consensus 239 ~l~~~~~~~~----~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g 313 (1678)
++++++...+ .+|+|||||+| +|.+++. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++
T Consensus 71 ~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~ 148 (277)
T d1o6ya_ 71 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 148 (277)
T ss_dssp CEEEEEEEECSSSEEEEEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTS
T ss_pred CCCCEEEECCCCCCEEEEEEECCCCCEEHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 311435432688766999997788987101120--358999999999999999999999857952763467556657543
Q ss_pred CEEEEEEECCCCCCC
Q ss_conf 415999726885447
Q 000316 314 WSWLYICDKPLVGFN 328 (1678)
Q Consensus 314 ~~~iKI~DFGlar~~ 328 (1678)
.++|+|||.++..
T Consensus 149 --~~~l~d~~~~~~~ 161 (277)
T d1o6ya_ 149 --AVKVMDFGIARAI 161 (277)
T ss_dssp --CEEECCCTTCEEC
T ss_pred --CCEEEHHHHHHHH
T ss_conf --2010034443221
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-37 Score=280.58 Aligned_cols=194 Identities=15% Similarity=0.155 Sum_probs=147.8
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.+.|++.+.||+|+||+||+|..+... ......||||.+... .......+++ +|+.+|+.++|||||++
T Consensus 6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~--~~~~~~vAvK~~~~~-~~~~~~~~~~--------~E~~il~~l~H~nIv~~ 74 (283)
T d1mqba_ 6 PSCVTRQKVIGAGEFGEVYKGMLKTSS--GKKEVPVAIKTLKAG-YTEKQRVDFL--------GEAGIMGQFSHHNIIRL 74 (283)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC-----CCEEEEEEEEECTT-CCHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEEECCC--CEEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 899686159811779099999996899--878799999998844-5968999999--------99999985689878323
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++.+.+.+++|||||.+ ++.+++.. ....+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~--~~Kl 151 (283)
T d1mqba_ 75 EGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKV 151 (283)
T ss_dssp EEEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEE
T ss_pred EEEEECCCCEEEEEEECCCCCCHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCC--EEEE
T ss_conf 6778338803899972135740222102-345420899999999999854121212342576564427888998--4998
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 726885447888864466888842000244567642100012233332222223347
Q 000316 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 320 ~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~~~~~~~d~W~~G 376 (1678)
+|||+|+.......... ......||+.|+|||++.+..|+.++|+|++|
T Consensus 152 ~DFGla~~~~~~~~~~~--------~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~G 200 (283)
T d1mqba_ 152 SDFGLSRVLEDDPEATY--------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFG 200 (283)
T ss_dssp CCCCC-------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCE--------EECCCCCCCCCCCHHHHCCCCCCCCCCCCCCH
T ss_conf 45510300357876526--------74267777343488887049999735563448
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-37 Score=282.89 Aligned_cols=148 Identities=16% Similarity=0.158 Sum_probs=127.7
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|+.+ ++..||||+++..... ..++. +|+.+|+.++|||||++
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~-------~~~~vAvK~~~~~~~~---~~~~~--------~E~~~l~~l~HpnIv~~ 73 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYN-------GHTKVAVKSLKQGSMS---PDAFL--------AEANLMKQLQHQRLVRL 73 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-------TTEEEEEEEECTTSSC---HHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEECCCCCEEEEEEEC-------CCCEEEEEEECCCCCC---HHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 899388679810798289999999-------9999999998647688---89999--------99999986799988578
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 169993896778513899-9988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++. ++.+|+|||||+ |+|.+++.......+++..+..++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 74 ~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~--~~Kl 150 (272)
T d1qpca_ 74 YAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKI 150 (272)
T ss_dssp EEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEE
T ss_pred EEEEC-CCCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCC--CEEE
T ss_conf 73104-59769999957898288887514789887889999999999999999748954675642251562024--4042
Q ss_pred EECCCCCCCC
Q ss_conf 7268854478
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlar~~~ 329 (1678)
+|||+|+...
T Consensus 151 ~DFGla~~~~ 160 (272)
T d1qpca_ 151 ADFGLARLIE 160 (272)
T ss_dssp CCCTTCEECS
T ss_pred CCCCCEEECC
T ss_conf 3410147735
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.4e-32 Score=245.69 Aligned_cols=116 Identities=15% Similarity=0.043 Sum_probs=52.3
Q ss_pred CCCCCCCEEE--ECCCCCCCCCCEEEEEECCCCEEEEECC-CC--EEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCC
Q ss_conf 4678991681--0599998899869999199979999689-84--26894126664799999149998999721789777
Q 000316 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-AS--ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1678)
Q Consensus 1279 ~~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~--~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dg 1353 (1678)
+.||.+.|.+ |+|++.+ |++||.|+++++|++. +. ....+.+|...|++++|+|+++.+++|+. |+
T Consensus 47 l~gH~~~V~~l~fsp~~~~-----l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~----d~ 117 (371)
T d1k8kc_ 47 LKEHNGQVTGVDWAPDSNR-----IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG----SR 117 (371)
T ss_dssp EECCSSCEEEEEEETTTTE-----EEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET----TS
T ss_pred ECCCCCCEEEEEECCCCCE-----EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC----CC
T ss_conf 5588998889999799999-----99997999399986203321100122322110001111111211000002----57
Q ss_pred EEEEEECCCCEE----EEEEECCCCCEEEEEECCCCCCEE--ECCCCEEEEECCCC
Q ss_conf 599996999838----889713786477986539999178--27995999979999
Q 000316 1354 TVQKWELTRINC----VSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTG 1403 (1678)
Q Consensus 1354 tVrIWDl~tg~~----l~tl~gH~~~V~sI~fsp~~~~la--S~DgtIkIWD~~tg 1403 (1678)
+|++|+++.... .....+|.+.|.+++|+|++..++ +.|++|++||...+
T Consensus 118 ~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~ 173 (371)
T d1k8kc_ 118 VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIK 173 (371)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCT
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCC
T ss_conf 63025442033433111001011122211111111111000134767999840157
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-36 Score=276.88 Aligned_cols=152 Identities=18% Similarity=0.197 Sum_probs=129.4
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|++.. ....+..||+|.++.. ........+. +|+.+|+.++|||||++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~---~~~~~~~vaik~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~l 73 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMS---PENPALAVAIKTCKNC-TSDSVREKFL--------QEALTMRQFDHPHIVKL 73 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC---C--CCEEEEEEECTTT-TSHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCCEEEEEEEEC---CCCEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 8996987799307882999999936---9964499999993656-6879999999--------99999986899998569
Q ss_pred EEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 1699938967785138999-988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++. .+.+|+||||+++ +|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 74 ~~~~~-~~~~~iv~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~--~~Kl 149 (273)
T d1mp8a_ 74 IGVIT-ENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND--CVKL 149 (273)
T ss_dssp EEEEC-SSSCEEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEE
T ss_pred EEEEE-CCEEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 88995-3747999984069807765422-478999999999999998775230226744141026553206789--6787
Q ss_pred EECCCCCCC
Q ss_conf 726885447
Q 000316 320 CDKPLVGFN 328 (1678)
Q Consensus 320 ~DFGlar~~ 328 (1678)
+|||+|+..
T Consensus 150 ~DfG~a~~~ 158 (273)
T d1mp8a_ 150 GDFGLSRYM 158 (273)
T ss_dssp CC-------
T ss_pred CCCHHHEEC
T ss_conf 650342133
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-36 Score=275.68 Aligned_cols=154 Identities=19% Similarity=0.180 Sum_probs=126.9
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|++.... ......||+|.++.. ......++++ +|+.+|+.++|||||++
T Consensus 8 ~~dy~~~~~lG~G~fG~Vy~~~~~~~~--~~~~~~vavK~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~l 76 (317)
T d1xkka_ 8 ETEFKKIKVLGSGAFGTVYKGLWIPEG--EKVKIPVAIKELREA-TSPKANKEIL--------DEAYVMASVDNPHVCRL 76 (317)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECC------CCEEEEEEEECC-----CTHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEEECCCCEEEEEEEECCCC--CEEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 899978319820899299999995899--889899999996513-4979999999--------99999986799888158
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 169993896778513899-9988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++.++. .++++|++. |+|.+.+.. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 77 ~g~~~~~~-~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~--~~kl 152 (317)
T d1xkka_ 77 LGICLTST-VQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ--HVKI 152 (317)
T ss_dssp EEEEESSS-EEEEEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT--EEEE
T ss_pred EEEEECCC-EEEEEEECCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCC--CEEE
T ss_conf 99996198-3699984268740101113-345799999999999999999999876950476212031167998--7586
Q ss_pred EECCCCCCCC
Q ss_conf 7268854478
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlar~~~ 329 (1678)
+|||+|+...
T Consensus 153 ~DFGla~~~~ 162 (317)
T d1xkka_ 153 TDFGLAKLLG 162 (317)
T ss_dssp CCCSHHHHTT
T ss_pred ECCCCCEECC
T ss_conf 0255222335
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7e-32 Score=243.38 Aligned_cols=296 Identities=14% Similarity=0.184 Sum_probs=218.6
Q ss_pred EEEEECCCCCCE-EEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE--EECCCCE
Q ss_conf 268941266647-9999914999899972178977759999699983888971378647798653999917--8279959
Q 000316 1319 ILSSIRAHHGAL-RSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTL 1395 (1678)
Q Consensus 1319 ~l~tl~gH~~~V-~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l--aS~DgtI 1395 (1678)
...+|+||.+.| +|++| ++++|+||+. |++|++||+.+++++.++++|.+.|++++|+++ +.+ ++.|++|
T Consensus 4 ~~~tL~GH~~~vitc~~~--~~~~l~tgs~----Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i 76 (355)
T d1nexb2 4 QRTTLRGHMTSVITCLQF--EDNYVITGAD----DKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTV 76 (355)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEET----TTEEEEEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCE
T ss_pred CCEEECCCCCCCEEEEEE--CCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEEECCC-CEEEEEECCCCC
T ss_conf 758889837886999998--8999999918----990999989999399999789998899998699-999999645244
Q ss_pred EEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 99979999456996046766556689998753334554443345777778378631598306767614997999997899
Q 000316 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1678)
Q Consensus 1396 kIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~Dg 1475 (1678)
++|+....++.......... .......+.+++..+++++.|+
T Consensus 77 ~iw~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~~~~~d~ 118 (355)
T d1nexb2 77 RVWDIKKGCCTHVFEGHNST--------------------------------------VRCLDIVEYKNIKYIVTGSRDN 118 (355)
T ss_dssp EEEETTTTEEEEEECCCSSC--------------------------------------EEEEEEEEETTEEEEEEEETTS
T ss_pred CCCCCCCCCCCCCCCCCCCC--------------------------------------CCCCCCCCCCCCCEEEEECCCC
T ss_conf 32111111111111001111--------------------------------------1111111112322045543888
Q ss_pred CEEEEECCCCEEEEEEECCCCCC----CCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE
Q ss_conf 19999888990358861799755----67875107875089754458655799889999409929999689992999993
Q 000316 1476 SLRFIDINQGQKLHLWRGEPTEL----GFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1678)
Q Consensus 1476 tIkiWDl~tg~~i~~l~~~~~~v----~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~ 1551 (1678)
+|++||++++..+.......... ........+..............++++.++++..|+.|++||.++++.+....
T Consensus 119 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~ 198 (355)
T d1nexb2 119 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 198 (355)
T ss_dssp EEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEE
T ss_conf 68999856773001246520001000001123401210110022210000256334421144204443013110001100
Q ss_pred CCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCC
Q ss_conf 1588769998-08999999995999399998699998887695058998899975299999994897-599956778897
Q 000316 1552 AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADE 1629 (1678)
Q Consensus 1552 gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~iwdl~~~~~~ 1629 (1678)
++...+.++. ++++..+++++.|++|++||..++ .....+.+|...|.+++++++.+++++.|+ |++||+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~--~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~---- 272 (355)
T d1nexb2 199 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--ELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAND---- 272 (355)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTC--CEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTT----
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCC--CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCC----
T ss_conf 01233211111121002101245636876301221--111111111111111123210033320111111111111----
Q ss_pred CCCCEECCCEEEEEECCCCCCCCEEE-EEEECCCCEEEEEECCCCEEECC
Q ss_conf 89610003102343069876574899-99944998999994898399909
Q 000316 1630 DGQHRLVPQKLYMVDNGAKNLSVLSS-ISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1630 ~g~~~~~~~kl~~~~~g~~h~~~I~s-iafsPd~~lLatgs~DG~IrIwd 1678 (1678)
+. +.... |...+.+ ..++++++++++|+ ||.|++||
T Consensus 273 -~~------~~~~~-----~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd 309 (355)
T d1nexb2 273 -YS------RKFSY-----HHTNLSAITTFYVSDNILVSGS-ENQFNIYN 309 (355)
T ss_dssp -CC------EEEEE-----ECTTCCCCCEEEECSSEEEEEE-TTEEEEEE
T ss_pred -CC------EECCC-----CCCCCEEEEEECCCCCEEEEEE-CCEEEEEE
T ss_conf -11------00012-----4688229999849998999980-99799999
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-36 Score=275.19 Aligned_cols=148 Identities=18% Similarity=0.170 Sum_probs=130.6
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||+||+|+. .++..||+|.+++..... .+++ +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~l~~~~~~~---~~~~--------~Ev~~~~~l~HpnIv~~ 64 (258)
T d1k2pa_ 3 PKDLTFLKELGTGQFGVVKYGKW-------RGQYDVAIKMIKEGSMSE---DEFI--------EEAKVMMNLSHEKLVQL 64 (258)
T ss_dssp CCCCCCCCCCCEETTEEEEEEEE-------TTTEEEEEEEEESSSSCH---HHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHCEEEEEEECCCCEEEEEEEE-------CCCCEEEEEEECCCCCCH---HHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 69979968982078839999998-------899899999987475778---9999--------99999996689860158
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 169993896778513899-9988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++.+++.+++||||++ |+|..++.. ....+++..+..++.|+++||.|||+++|+||||||+|||++.++ .+||
T Consensus 65 ~g~~~~~~~~~iv~Ey~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~--~~kl 141 (258)
T d1k2pa_ 65 YGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG--VVKV 141 (258)
T ss_dssp EEEECCSSSEEEEEECCTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCCEEEEEECCCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC--CEEE
T ss_conf 8998507816999970489938886410-246776899999999999999987546843466541358876998--4798
Q ss_pred EECCCCCCCC
Q ss_conf 7268854478
Q 000316 320 CDKPLVGFNS 329 (1678)
Q Consensus 320 ~DFGlar~~~ 329 (1678)
+|||+|+...
T Consensus 142 ~DfG~a~~~~ 151 (258)
T d1k2pa_ 142 SDFGLSRYVL 151 (258)
T ss_dssp CCCSSCCBCS
T ss_pred CCCHHHEECC
T ss_conf 8614420235
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-36 Score=276.79 Aligned_cols=147 Identities=18% Similarity=0.165 Sum_probs=127.7
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++.+.||+|+||+||+|+++ ++..||||+++..... ...+. +|+.+|+.++|||||++
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~-------~~~~vAiK~l~~~~~~---~~~~~--------~E~~~l~~l~h~nIv~~ 77 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWN-------GTTRVAIKTLKPGTMS---PEAFL--------QEAQVMKKLRHEKLVQL 77 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-------TTEEEEEEECCTTSSC---HHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEEC-------CCCEEEEEEECCCCCC---HHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 799798469930798099999999-------9999999998804488---89999--------99999986666788689
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEE
Q ss_conf 169993896778513899-9988898619999887999999999999999998948922068998973755799415999
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI 319 (1678)
++++. .+.+|+|||||+ |+|..++.......+++..+..++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 78 ~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~--~~kl 154 (285)
T d1fmka3 78 YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 154 (285)
T ss_dssp EEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEE
T ss_pred EEEEE-CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCC--CEEE
T ss_conf 99982-39759999944799435420000355305999999999999999987541143353123079998999--2998
Q ss_pred EECCCCCCC
Q ss_conf 726885447
Q 000316 320 CDKPLVGFN 328 (1678)
Q Consensus 320 ~DFGlar~~ 328 (1678)
+|||+|+..
T Consensus 155 ~DfGla~~~ 163 (285)
T d1fmka3 155 ADFGLARLI 163 (285)
T ss_dssp CCCCTTC--
T ss_pred CCCCHHHHC
T ss_conf 442555425
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.3e-32 Score=243.74 Aligned_cols=279 Identities=11% Similarity=0.132 Sum_probs=218.2
Q ss_pred CCCCCCCCCCEEE--ECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEE-CCCCCCEEEEEEECCCCEEEEEECCCCC
Q ss_conf 0234678991681--0599998899869999199979999689-8426894-1266647999991499989997217897
Q 000316 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSI-RAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1678)
Q Consensus 1276 ~~~~~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl-~gH~~~V~svafspdg~~LaSgs~d~~~ 1351 (1678)
...+.||.+.|++ |||+|.+ |++||.|+++++||++ +.+++++ .+|.+.|.+++|+|++++++ ++.
T Consensus 5 ~~~~~GH~~~V~~l~~s~dg~~-----l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~-~~~---- 74 (299)
T d1nr0a2 5 DQVRYGHNKAITALSSSADGKT-----LFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT-VSW---- 74 (299)
T ss_dssp EEEECCCSSCEEEEEECTTSSE-----EEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEE-EET----
T ss_pred CEECCCCCCCCEEEEECCCCCE-----EEEECCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCEEEC-CCC----
T ss_conf 3684888878289999799999-----999908992999999999688998378877489988403311210-231----
Q ss_pred CCEEEEEECCCCEE---EEEEECCCCCEEEEEECCCCCCE-EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 77599996999838---88971378647798653999917-827995999979999456996046766556689998753
Q 000316 1352 KGTVQKWELTRINC---VSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1352 DgtVrIWDl~tg~~---l~tl~gH~~~V~sI~fsp~~~~l-aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
|+++++|+...... ......|...+.+++|++++..+ +++++.+++|+.. +.......
T Consensus 75 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~--~~~~~~~~---------------- 136 (299)
T d1nr0a2 75 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHG--KLTEVPIS---------------- 136 (299)
T ss_dssp TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETT--EEEEEECS----------------
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCC----------------
T ss_conf 026887316776201110001111344321001122111112222222111111--11110111----------------
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEE
Q ss_conf 33455444334577777837863159830676761499799999789919999888990358861799755678751078
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~i 1507 (1678)
...++++++++++.+++|+.|+.+++||+++++....... .+...|.++
T Consensus 137 --------------------------~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~-----~~~~~i~~~ 185 (299)
T d1nr0a2 137 --------------------------YNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTI-----VHPAEITSV 185 (299)
T ss_dssp --------------------------SCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEE-----ECSSCEEEE
T ss_pred --------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCC
T ss_conf --------------------------1233221111111111111111111111111111111111-----111111111
Q ss_pred EEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEE---EEEECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECC
Q ss_conf 7508975445865579988999940992999968999299---99931588769998-0899999999599939999869
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI---ASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLR 1583 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i---~~l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~ 1583 (1678)
+++ +++.++++|+.|+.|++||..++... ..+.+|...|++++ +|++.+|++|+.|++|++||+.
T Consensus 186 ~~~-----------~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~ 254 (299)
T d1nr0a2 186 AFS-----------NNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 254 (299)
T ss_dssp EEC-----------TTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCC-----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECC
T ss_conf 111-----------111111111111111111111111111111111111111111246664513888289979999899
Q ss_pred CCCCCCCEEEECCC-CCEEE-EEECCCEEEEEECCC-EEEEECC
Q ss_conf 99988876950589-98899-975299999994897-5999567
Q 000316 1584 RNWPSQPTVFKGHT-NGISG-FSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1584 ~~~~~~~~~l~gH~-~~V~a-fSpdg~~LaSgs~D~-I~iwdl~ 1624 (1678)
++..........|. ..+.+ ++++++.|++++.|+ |++||+.
T Consensus 255 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 255 KPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp CTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCEEEEEECC
T ss_conf 99731489834898896899997798999999289979999444
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-36 Score=272.50 Aligned_cols=180 Identities=17% Similarity=0.149 Sum_probs=138.5
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCCC
Q ss_conf 789667633543272799999963777745562099999821577672778999985089935588851028-9876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|+++++||+|+||.||+|++.. .+...+++.||+|.++.. .......+++ +|..++..+ +|+||+.
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~-~~~~~~~~~vAvK~l~~~-~~~~~~~~~~--------~e~~~l~~~~~h~~iv~ 81 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEG-ATHSEHRALM--------SELKILIHIGHHLNVVN 81 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEES-TTSSSCEEEEEEEEC-----CHHHHHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEECC-CCCCCCCEEEEEEEECCC-CCCHHHHHHH--------HHHHHHHHHCCCCEEEE
T ss_conf 7997984498416783999999867-775557839999998600-1717899999--------99999886149984997
Q ss_pred EEEEEEECC-EEEEECCCCC-CCHHHHHHHCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf 316999389-6778513899-99888986199--------------9988799999999999999999894892206899
Q 000316 240 VLGLLKTSG-LITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1678)
Q Consensus 240 l~~~~~~~~-~l~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLK 303 (1678)
+++++...+ .+++|||||+ |+|.++++... ...+++..++.++.||+.||.|||+++|+|||||
T Consensus 82 ~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlK 161 (299)
T d1ywna1 82 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 161 (299)
T ss_dssp EEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred EEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 41154047975799998458992999998536666653222023321468999999999999999998873797178677
Q ss_pred CCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 8973755799415999726885447888864466888842000244567642100012
Q 000316 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1678)
Q Consensus 304 P~NILl~~~g~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil 361 (1678)
|+|||++.++ .+||+|||+|+......... ......||+.|+|||++
T Consensus 162 p~NILl~~~~--~~Kl~DFGla~~~~~~~~~~---------~~~~~~gt~~y~APE~l 208 (299)
T d1ywna1 162 ARNILLSEKN--VVKICDFGLARDIYKDPDYV---------RKGDARLPLKWMAPETI 208 (299)
T ss_dssp GGGEEECGGG--CEEECC------CCSCTTSC---------CTTSCCCGGGGCCHHHH
T ss_pred CCCEEECCCC--CEEECCCCCHHHCCCCCCCC---------CCCCEEECCCCCCHHHH
T ss_conf 3106577998--28984575200113566522---------24751667210203686
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.6e-36 Score=272.74 Aligned_cols=157 Identities=17% Similarity=0.145 Sum_probs=133.0
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||+||+|+.+- .....++..||||+++.. .......++. +|+.+|+.++||||+++
T Consensus 12 ~~~~~~~~~lG~G~fG~Vy~a~~~~-~~~~~~~~~vAvK~i~~~-~~~~~~~~~~--------~E~~il~~l~h~niv~~ 81 (301)
T d1lufa_ 12 RNNIEYVRDIGEGAFGRVFQARAPG-LLPYEPFTMVAVKMLKEE-ASADMQADFQ--------REAALMAEFDNPNIVKL 81 (301)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEET-SSTTSSEEEEEEEECCTT-CCHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEECC-CCCCCCCEEEEEEEECHH-CCHHHHHHHH--------HHHHHHHHCCCCCCCCC
T ss_conf 8893886798207883999999888-765778829999998821-0857999999--------99999996689976552
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 169993896778513899-99888986199----------------------9988799999999999999999894892
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGI 297 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~----------------------~~~l~~~~i~~i~~qil~aL~yLH~~~I 297 (1678)
++++...+.+++||||++ |+|.++++... ...++...+..++.|++.||.|||+++|
T Consensus 82 ~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i 161 (301)
T d1lufa_ 82 LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF 161 (301)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 46660598038999815899299999852755421000011100121034678898999999999999998554135786
Q ss_pred EECCCCCCCEEECCCCCEEEEEEECCCCCCCC
Q ss_conf 20689989737557994159997268854478
Q 000316 298 AHRSVCPSNVLLTDSCWSWLYICDKPLVGFNS 329 (1678)
Q Consensus 298 iHRDLKP~NILl~~~g~~~iKI~DFGlar~~~ 329 (1678)
+||||||+|||++.++ .+||+|||+|+...
T Consensus 162 vHrDlKp~NILld~~~--~~Kl~DFGls~~~~ 191 (301)
T d1lufa_ 162 VHRDLATRNCLVGENM--VVKIADFGLSRNIY 191 (301)
T ss_dssp CCSCCSGGGEEECGGG--CEEECCCSCHHHHT
T ss_pred EEEEECCCCEEECCCC--CEEECCCHHHEECC
T ss_conf 8548840116898999--28983314421136
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-35 Score=268.89 Aligned_cols=157 Identities=18% Similarity=0.182 Sum_probs=132.6
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCC
Q ss_conf 789667633543272799999963777-745562099999821577672778999985089935588851028-987613
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLS-GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~-~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l-~HpNIV 238 (1678)
.++|++++.||+|+||.||+|+..-.. ....++..||+|+++++ .......++. +|...+..+ +|||||
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~--------~e~~~l~~~~~HpnIv 82 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLI--------SEMEMMKMIGKHKNII 82 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT-CCHHHHHHHH--------HHHHHHHHHCCCTTBC
T ss_pred HHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHHCCCCEEE
T ss_conf 899697009851678289999985787555667549999998811-2868899999--------9999999813999697
Q ss_pred CEEEEEEECCEEEEECCCCC-CCHHHHHHHCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf 33169993896778513899-99888986199--------------9988799999999999999999894892206899
Q 000316 239 PVLGLLKTSGLITSVIPKTP-YTLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1678)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~--------------~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLK 303 (1678)
++++++.++..+|+|||||+ |+|.++++... ...+++..++.++.||+.||.|||+++|+|||||
T Consensus 83 ~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiK 162 (299)
T d1fgka_ 83 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 162 (299)
T ss_dssp CEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred ECCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
T ss_conf 34652201886899997369990999998606776432223345743467999999999999999987663797863022
Q ss_pred CCCEEECCCCCEEEEEEECCCCCCC
Q ss_conf 8973755799415999726885447
Q 000316 304 PSNVLLTDSCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 304 P~NILl~~~g~~~iKI~DFGlar~~ 328 (1678)
|+|||++.++ .+||+|||+++..
T Consensus 163 p~NiLl~~~~--~~kl~dfg~~~~~ 185 (299)
T d1fgka_ 163 ARNVLVTEDN--VMKIADFGLARDI 185 (299)
T ss_dssp GGGEEECTTC--CEEECSTTCCCCG
T ss_pred CCCEEECCCC--CEEECCCHHHCCC
T ss_conf 1022454789--7676221110113
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-35 Score=265.23 Aligned_cols=157 Identities=21% Similarity=0.190 Sum_probs=133.6
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCCCC
Q ss_conf 789667633543272799999963777745562099999821577672778999985089935588851028-9876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l-~HpNIV~ 239 (1678)
.++|++.++||+|+||.||+|+.... ....++..||+|+++... ......++. +|+.+++.+ +|||||+
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~-~~~~~~~~vAvK~i~~~~-~~~~~~~~~--------~E~~~~~~l~~HpnIv~ 91 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYGL-IKSDAAMTVAVKMLKPSA-HLTEREALM--------SELKVLSYLGNHMNIVN 91 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESS-SSTTCEEEEEEEEECTTC-CHHHHHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEEECC-CCCCCCEEEEEEEECCCC-CHHHHHHHH--------HHHHHHHHCCCCCCEEE
T ss_conf 89969854982068829999998066-447788699999987424-877999999--------99999876269998878
Q ss_pred EEEEEEECCEEEEECCCCCC-CHHHHHHHCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCC
Q ss_conf 31699938967785138999-9888986199----------------998879999999999999999989489220689
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~----------------~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDL 302 (1678)
+++++.+...+|+|||||++ +|.++++... ...+++..++.++.||+.||.|||+++++||||
T Consensus 92 ~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDL 171 (311)
T d1t46a_ 92 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 171 (311)
T ss_dssp EEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCC
T ss_conf 99898319978999973799879999985356654444453322233458899999999999999999887579266624
Q ss_pred CCCCEEECCCCCEEEEEEECCCCCCCC
Q ss_conf 989737557994159997268854478
Q 000316 303 CPSNVLLTDSCWSWLYICDKPLVGFNS 329 (1678)
Q Consensus 303 KP~NILl~~~g~~~iKI~DFGlar~~~ 329 (1678)
||+|||++.++ .+|++|||+++...
T Consensus 172 Kp~NIl~~~~~--~~ki~DfG~~~~~~ 196 (311)
T d1t46a_ 172 AARNILLTHGR--ITKICDFGLARDIK 196 (311)
T ss_dssp SGGGEEEETTT--EEEECCCGGGSCTT
T ss_pred CCCCCCCCCCC--CCCCCCCCHHEECC
T ss_conf 10210000257--52102340102336
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-35 Score=268.60 Aligned_cols=151 Identities=21% Similarity=0.239 Sum_probs=129.2
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCC--EEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCC-CCCCC
Q ss_conf 789667633543272799999963777745562--099999821577672778999985089935588851028-98761
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDC--VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~--~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l-~HpNI 237 (1678)
.++|++.++||+|+||+||+|+++ .++ ..||||.+... ........+. +|+.+|..+ +||||
T Consensus 9 ~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~HpnI 73 (309)
T d1fvra_ 9 WNDIKFQDVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNI 73 (309)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEE------ETTEEEEEEEEEEECC-------CHHH--------HHHHHHTTCCCCTTB
T ss_pred HHHCEEEEEEEECCCCEEEEEEEC------CCCEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCCE
T ss_conf 799688779820788289999998------9996999999997823-3857999999--------999999862289988
Q ss_pred CCEEEEEEECCEEEEECCCCC-CCHHHHHHHC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCC
Q ss_conf 333169993896778513899-9988898619--------------9998879999999999999999989489220689
Q 000316 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1678)
Q Consensus 238 V~l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~--------------~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDL 302 (1678)
|++++++.+.+.+|+||||++ |+|.++++.. ....+++..+..++.||+.||.|+|+++|+||||
T Consensus 74 v~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDl 153 (309)
T d1fvra_ 74 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDL 153 (309)
T ss_dssp CCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred EEEEEEEECCCEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 36788884187369999802898699998640355555123101234578999999999999999987663089545550
Q ss_pred CCCCEEECCCCCEEEEEEECCCCCCC
Q ss_conf 98973755799415999726885447
Q 000316 303 CPSNVLLTDSCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 303 KP~NILl~~~g~~~iKI~DFGlar~~ 328 (1678)
||+|||++.++ .+||+|||+|+..
T Consensus 154 kp~NIL~~~~~--~~kl~DfG~a~~~ 177 (309)
T d1fvra_ 154 AARNILVGENY--VAKIADFGLSRGQ 177 (309)
T ss_dssp SGGGEEECGGG--CEEECCTTCEESS
T ss_pred CCCEEEECCCC--CEEECCCCCCCCC
T ss_conf 52048986887--6387434432244
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.4e-36 Score=273.37 Aligned_cols=154 Identities=20% Similarity=0.161 Sum_probs=129.7
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHH-HHHHHHHCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 78966763354327279999996377774556209999982157767277-89999850899355888510289876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~-~~~~l~~~~~~al~Ei~iL~~l~HpNIV~ 239 (1678)
.++|++++.||+|+||+||+|+..... .....||+|.+++....... ..++. +|+.+|+.++|||||+
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~---~~~~~vAiK~l~~~~~~~~~~~~~~~--------~Ei~~l~~l~H~nIv~ 75 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPS---GKTVSVAVKCLKPDVLSQPEAMDDFI--------REVNAMHSLDHRNLIR 75 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTT---SCEEEEEEEC--------CHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEECCCCEEEEEEEEECCC---CCEEEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 489199789803888399999998899---90799999999835557989999999--------9999998689999878
Q ss_pred EEEEEEECCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 3169993896778513899-998889861999988799999999999999999894892206899897375579941599
Q 000316 240 VLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
+++++.+ ..+++|||||+ |++.+.+.. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+|
T Consensus 76 ~~g~~~~-~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~--~vk 151 (273)
T d1u46a_ 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD--LVK 151 (273)
T ss_dssp EEEEECS-SSCEEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT--EEE
T ss_pred EEEEEEE-CCHHEEEEEECCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCC--CEE
T ss_conf 9877740-100114654238612544421-268999999999999999999875217875205668881565565--433
Q ss_pred EEECCCCCCCC
Q ss_conf 97268854478
Q 000316 319 ICDKPLVGFNS 329 (1678)
Q Consensus 319 I~DFGlar~~~ 329 (1678)
|+|||+++...
T Consensus 152 l~DfGl~~~~~ 162 (273)
T d1u46a_ 152 IGDFGLMRALP 162 (273)
T ss_dssp ECCCTTCEECC
T ss_pred ECCCHHHHHCC
T ss_conf 25611555303
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-30 Score=232.67 Aligned_cols=284 Identities=16% Similarity=0.220 Sum_probs=206.2
Q ss_pred EEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE--EECCCCEE
Q ss_conf 2689412666479999914999899972178977759999699983888971378647798653999917--82799599
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLH 1396 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l--aS~DgtIk 1396 (1678)
.+....+|...|+|++| |+++|+|||. |++|++||+.+++++.++++|.+.|++++|. +..+ ++.|++|+
T Consensus 7 ~i~~~~~~~~~V~c~~~--d~~~l~sgs~----Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~--~~~l~s~s~D~~i~ 78 (293)
T d1p22a2 7 RIHCRSETSKGVYCLQY--DDQKIVSGLR----DNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGSSDSTVR 78 (293)
T ss_dssp CEECCCSSCCCEEEEEC--CSSEEEEEES----SSCEEEEESSSCCEEEEECCCSSCEEEEECC--SSEEEEEETTSCEE
T ss_pred EEECCCCCCCCEEEEEE--CCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEECC--CCEEECCCCCCCCC
T ss_conf 98432899998899987--6999999928----9939999999991999992677877634236--30021001110110
Q ss_pred EEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 99799994569960467665566899987533345544433457777783786315983067676149979999978991
Q 000316 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1678)
Q Consensus 1397 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~Dgt 1476 (1678)
+|+...+........... ...........++++..++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~ 116 (293)
T d1p22a2 79 VWDVNTGEMLNTLIHHCE------------------------------------------AVLHLRFNNGMMVTCSKDRS 116 (293)
T ss_dssp EEESSSCCEEEEECCCCS------------------------------------------CEEEEECCTTEEEEEETTSC
T ss_pred CCCCCCCCCCCCCCCCCC------------------------------------------CCCCCCCCCCCEEECCCCCC
T ss_conf 000024641001111110------------------------------------------00011111100000135663
Q ss_pred EEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCC
Q ss_conf 99998889903588617997556787510787508975445865579988999940992999968999299999315887
Q 000316 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1678)
Q Consensus 1477 IkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~ 1556 (1678)
+++||..+........... .+...+.+..+. +..+++++.|+.+++||.++++.+..+.++...
T Consensus 117 ~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~-------------~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~ 180 (293)
T d1p22a2 117 IAVWDMASPTDITLRRVLV---GHRAAVNVVDFD-------------DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180 (293)
T ss_dssp EEEEECSSSSCCEEEEEEC---CCSSCEEEEEEE-------------TTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEEECCCCCCCCCCCCCC---CCCCCCCCCEEC-------------CCCCCCCCCCCCEEEECCCCCCEEEEECCCCCC
T ss_conf 0686134454442121000---113543110000-------------022011069986041007888388997155445
Q ss_pred EEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEE
Q ss_conf 6999808999999995999399998699998887695058998899975299999994897-599956778897896100
Q 000316 1557 VTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRL 1635 (1678)
Q Consensus 1557 V~sIaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~~~ 1635 (1678)
+..+. +++..+++++.|++|++||+++. ..+....++...+..+++++..+++++.|+ |++|++.........
T Consensus 181 v~~~~-~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~--- 254 (293)
T d1p22a2 181 IACLQ-YRDRLVVSGSSDNTIRLWDIECG--ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAP--- 254 (293)
T ss_dssp EEEEE-EETTEEEEEETTSCEEEEETTTC--CEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSC---
T ss_pred CCCCC-CCCCEEEEECCCCEEEEEECCCC--EEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCC---
T ss_conf 32216-89875887658998999866556--1466521431000001454107999867997999988888644456---
Q ss_pred CCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 0310234306987657489999944998999994898399909
Q 000316 1636 VPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1636 ~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.......... +|.+.|++++| ++..|++||.||+|++||
T Consensus 255 ~~~~~~~~~~--~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 255 AGTLCLRTLV--EHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp TTTTEEEEEC--CCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred CCCEEEEEEC--CCCCCEEEEEE--CCCEEEEEECCCEEEEEC
T ss_conf 7754557845--88998899997--199999992299899959
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.9e-33 Score=254.85 Aligned_cols=202 Identities=16% Similarity=0.068 Sum_probs=162.3
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCC-CCCCC
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898-76133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH-PNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~H-pNIV~ 239 (1678)
.++|+++++||+|+||+||+|++. .++..||+|.+....... ++. +|++.++.+.| +||+.
T Consensus 4 g~~Y~i~~~iG~G~fG~Vy~a~~~------~~~~~vAvK~~~~~~~~~----~~~--------~e~~~~~~l~~~~~i~~ 65 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFGVIFEGTNL------LNNQQVAIKFEPRRSDAP----QLR--------DEYRTYKLLAGCTGIPN 65 (293)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEET------TTTEEEEEEEEECCTTSC----CHH--------HHHHHHHHTTTCTTCCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCCCH----HHH--------HHHHHHHHHCCCCCCCE
T ss_conf 980699799841788299999998------899799999975025829----999--------99999999648999877
Q ss_pred EEEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC-----CCC
Q ss_conf 316999389677851389999888986199998879999999999999999989489220689989737557-----994
Q 000316 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-----SCW 314 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~-----~g~ 314 (1678)
+++++......|+||||++++|.++++. ....++...+..++.|++.||.|||++||+||||||+|||++. .+
T Consensus 66 ~~~~~~~~~~~~~vme~~~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~- 143 (293)
T d1csna_ 66 VYYFGQEGLHNVLVIDLLGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN- 143 (293)
T ss_dssp EEEEEEETTEEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTT-
T ss_pred EEEEEECCCCCEEEEEECCCCHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCC-
T ss_conf 9999601881179999648887999975-20311068999999999999999997796626677131523475434479-
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 15999726885447888864466888842000244567642100012233332222223347652046676520256999
Q 000316 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1678)
Q Consensus 315 ~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~~~~~~~d~W~~G~isnfeyl~~ln~~agrs 394 (1678)
.+||+|||+|+............. .......||+.|||||++.+..|+..+|+|+.|.+ .+.++.|+.
T Consensus 144 -~vkl~DFG~a~~~~~~~~~~~~~~----~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~-------l~elltg~~ 211 (293)
T d1csna_ 144 -MIYVVDFGMVKFYRDPVTKQHIPY----REKKNLSGTARYMSINTHLGREQSRRDDLEALGHV-------FMYFLRGSL 211 (293)
T ss_dssp -CEEECCCTTCEESBCTTTCCBCCC----CCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH-------HHHHHHSSC
T ss_pred -CEEECCCCEEEECCCCCCCCCEEE----CCCCCEEECHHHCCHHHHCCCCCCHHHHHHHHHHH-------HHHHHHCCC
T ss_conf -568723660577146766541110----24676277510267989648888869998983199-------999986987
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-33 Score=256.45 Aligned_cols=151 Identities=18% Similarity=0.135 Sum_probs=125.5
Q ss_pred EEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 66763354327279999996377774556209999982157767277899998508993558885102898761333169
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1678)
Q Consensus 164 y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l~~~ 243 (1678)
+...++||+|+||+||+|+..... .....||||.++.. .......+++ +|+++|+.++|||||+++++
T Consensus 29 ~~~~~~iG~G~fg~Vyk~~~~~~~---~~~~~vAvK~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~~~g~ 96 (311)
T d1r0pa_ 29 VHFNEVIGRGHFGCVYHGTLLDND---GKKIHCAVKSLNRI-TDIGEVSQFL--------TEGIIMKDFSHPNVLSLLGI 96 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-------CEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHTCCCTTBCCCCEE
T ss_pred ECCCEEEEECCCEEEEEEEEECCC---CEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEEEEE
T ss_conf 526669813688099999997799---87999999998843-6978999999--------99999986789998678678
Q ss_pred EEE-CCEEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEEEEE
Q ss_conf 993-896778513899-998889861999988799999999999999999894892206899897375579941599972
Q 000316 244 LKT-SGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1678)
Q Consensus 244 ~~~-~~~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iKI~D 321 (1678)
+.. +..+++|||||+ |+|.+++.. .....+...+..++.|++.||.|+|+++|+||||||+|||+++++ .+||+|
T Consensus 97 ~~~~~~~~~lv~E~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~--~~kL~D 173 (311)
T d1r0pa_ 97 CLRSEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVAD 173 (311)
T ss_dssp EEETTTEEEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC--CEEECS
T ss_pred EEECCCCEEEEEEEEECCCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCC--CEEEEC
T ss_conf 98069943899987406741442101-345404899999999988765200336762577668757677999--889910
Q ss_pred CCCCCCCC
Q ss_conf 68854478
Q 000316 322 KPLVGFNS 329 (1678)
Q Consensus 322 FGlar~~~ 329 (1678)
||+++...
T Consensus 174 FG~~~~~~ 181 (311)
T d1r0pa_ 174 FGLARDMY 181 (311)
T ss_dssp SGGGCCTT
T ss_pred CCCHHHCC
T ss_conf 65232255
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-34 Score=263.60 Aligned_cols=156 Identities=18% Similarity=0.121 Sum_probs=131.7
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|+++++||+|+||+||+|.++.. ....++..||||+++.. ........++ +|+.+++.++|||||++
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~-~~~~~~~~VAvK~~~~~-~~~~~~~~~~--------~E~~il~~l~h~nIv~~ 88 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGV-VKDEPETRVAIKTVNEA-ASMRERIEFL--------NEASVMKEFNCHHVVRL 88 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEE-ETTEEEEEEEEEECCTT-SCHHHHHHHH--------HHHHHGGGCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEECCC-CCCCCCCEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 89918835982078818999998786-44778968999998701-2868999999--------99999997699988412
Q ss_pred EEEEEECCEEEEECCCCC-CCHHHHHHHC--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECC
Q ss_conf 169993896778513899-9988898619--------9998879999999999999999989489220689989737557
Q 000316 241 LGLLKTSGLITSVIPKTP-YTLENILQFS--------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1678)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~-g~L~~~l~~~--------~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~ 311 (1678)
++++.....+++|||||+ |+|.+++... ....++...+..++.|++.||.|||+++|+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~ 168 (308)
T d1p4oa_ 89 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 168 (308)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT
T ss_pred EEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEECCCCEEECC
T ss_conf 54784288106777604899889998750332113444688799999999999999999876479654328677540359
Q ss_pred CCCEEEEEEECCCCCCC
Q ss_conf 99415999726885447
Q 000316 312 SCWSWLYICDKPLVGFN 328 (1678)
Q Consensus 312 ~g~~~iKI~DFGlar~~ 328 (1678)
++ .+||+|||+|+..
T Consensus 169 ~~--~~Kl~DFGla~~~ 183 (308)
T d1p4oa_ 169 DF--TVKIGDFGMTRDI 183 (308)
T ss_dssp TC--CEEECCTTCCCGG
T ss_pred CC--EEEEEECCCCEEC
T ss_conf 96--4999424542023
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-35 Score=266.32 Aligned_cols=145 Identities=20% Similarity=0.200 Sum_probs=126.2
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
.++|++++.||+|+||.||+|+. .+..||+|.++... ...++. +|+.+|+.++||||+++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~--------~~~~vAvK~i~~~~----~~~~~~--------~E~~~l~~l~HpnIv~~ 65 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 65 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--------TTEEEEEEECCCCC------HHHH--------HTHHHHTTCCCTTBCCE
T ss_pred HHHEEEEEEEECCCCEEEEEEEE--------CCEEEEEEEECCHH----HHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 89948857982079808999999--------99099999988577----799999--------99999986789898549
Q ss_pred EEEEEE-CCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCEEEE
Q ss_conf 169993-8967785138999-98889861999988799999999999999999894892206899897375579941599
Q 000316 241 LGLLKT-SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1678)
Q Consensus 241 ~~~~~~-~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~~iK 318 (1678)
++++.. .+.+|+||||+++ +|.+++.......++...++.++.||+.||.|||+++|+||||||+|||++.++ .+|
T Consensus 66 ~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~--~~k 143 (262)
T d1byga_ 66 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN--VAK 143 (262)
T ss_dssp EEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS--CEE
T ss_pred EEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECCCC--CEE
T ss_conf 878872389289999636999899998745788889999999999998523211337655366656760146899--776
Q ss_pred EEECCCCCC
Q ss_conf 972688544
Q 000316 319 ICDKPLVGF 327 (1678)
Q Consensus 319 I~DFGlar~ 327 (1678)
|+|||+++.
T Consensus 144 l~dfg~s~~ 152 (262)
T d1byga_ 144 VSDFGLTKE 152 (262)
T ss_dssp ECCCCC---
T ss_pred ECCCCCCEE
T ss_conf 324560034
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-29 Score=226.97 Aligned_cols=278 Identities=21% Similarity=0.334 Sum_probs=216.5
Q ss_pred CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE--EECCCC
Q ss_conf 842689412666479999914999899972178977759999699983888971378647798653999917--827995
Q 000316 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGT 1394 (1678)
Q Consensus 1317 g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l--aS~Dgt 1394 (1678)
.++.++++||.++|.+ +++++|++|+|||. |++|++||+.+++++.++.+|.+.|.+++|+++ .+ ++.|++
T Consensus 6 ~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~----Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~ 78 (342)
T d2ovrb2 6 LKSPKVLKGHDDHVIT-CLQFCGNRIVSGSD----DNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRT 78 (342)
T ss_dssp CCCCEEEECSTTSCEE-EEEEETTEEEEEET----TSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSC
T ss_pred CCCCEEECCCCCCEEE-EEEECCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEEECCC--CCCCCEECCC
T ss_conf 8758898886875099-99978999999918----990999989999799999488999899994798--6321000001
Q ss_pred EEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC
Q ss_conf 99997999945699604676655668999875333455444334577777837863159830676761499799999789
Q 000316 1395 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1474 (1678)
Q Consensus 1395 IkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D 1474 (1678)
+++|+.............. ..+.... .....+..+..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~------------~~~~~~~~~~~d 116 (342)
T d2ovrb2 79 LKVWNAETGECIHTLYGHT------------------------------STVRCMH------------LHEKRVVSGSRD 116 (342)
T ss_dssp EEEEETTTTEEEEEECCCS------------------------------SCEEEEE------------EETTEEEEEETT
T ss_pred CCCCCCCCCCCEECCCCCC------------------------------EEEEEEE------------CCCCCCCCCCCC
T ss_conf 1111111000000012333------------------------------0476520------------246522123444
Q ss_pred CCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCC
Q ss_conf 91999988899035886179975567875107875089754458655799889999409929999689992999993158
Q 000316 1475 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD 1554 (1678)
Q Consensus 1475 gtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~ 1554 (1678)
+++.+|+..+++....+...... .. ... .....+++++.|+.|++||.+..+.+..+.+|.
T Consensus 117 ~~i~~~~~~~~~~~~~~~~~~~~------~~--~~~-----------~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~ 177 (342)
T d2ovrb2 117 ATLRVWDIETGQCLHVLMGHVAA------VR--CVQ-----------YDGRRVVSGAYDFMVKVWDPETETCLHTLQGHT 177 (342)
T ss_dssp SEEEEEESSSCCEEEEEECCSSC------EE--EEE-----------ECSSCEEEEETTSCEEEEEGGGTEEEEEECCCS
T ss_pred EEEEEEECCCCCCEEEEECCCCC------CE--EEC-----------CCCCEEEEECCCCEEEEEECCCCEEEEEECCCC
T ss_conf 03787403556300111001111------00--000-----------133302433589869995252343667872754
Q ss_pred CCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCC
Q ss_conf 876999808999999995999399998699998887695058998899975299999994897-5999567788978961
Q 000316 1555 GYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQH 1633 (1678)
Q Consensus 1555 ~~V~sIaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~ 1633 (1678)
..+..+ ++++..+++++.|++|++||++.+ ..+..+.+|...+.+++++++++++++.|+ |++|++... .
T Consensus 178 ~~~~~~-~~~~~~l~s~~~dg~i~~~d~~~~--~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~-----~- 248 (342)
T d2ovrb2 178 NRVYSL-QFDGIHVVSGSLDTSIRVWDVETG--NCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTG-----Q- 248 (342)
T ss_dssp SCEEEE-EECSSEEEEEETTSCEEEEETTTC--CEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTC-----C-
T ss_pred CCCCCC-CCCCCEEEEEECCCEEEEEECCCC--EEEEEECCCCCCEEEEECCCCEEEEECCCCEEEEEECCCC-----C-
T ss_conf 442100-689999999958993999525565--3656741665320577068999999748988999865544-----2-
Q ss_pred EECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 000310234306987657489999944998999994898399909
Q 000316 1634 RLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1634 ~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
..........|...+.+++++ +.++++|+.||.|++||
T Consensus 249 -----~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd 286 (342)
T d2ovrb2 249 -----CLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 286 (342)
T ss_dssp -----EEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred -----CCCCCCCCCEEEECEEECCCC--CCEEEEECCCCEEEEEE
T ss_conf -----211122100011010000137--98449990899899999
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.8e-30 Score=230.02 Aligned_cols=272 Identities=16% Similarity=0.123 Sum_probs=203.2
Q ss_pred EECCCCCCCCCCEEEEEECCCC-EEEEECC---CCEEEEECCCC-CCEEEEEEEC--CCCEEEEEECCCCCCCEEEEEEC
Q ss_conf 1059999889986999919997-9999689---84268941266-6479999914--99989997217897775999969
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKD-ESPWKIK---ASILSSIRAHH-GALRSVAVGQ--DECTVFTAGIGPGFKGTVQKWEL 1360 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~-v~lWd~~---g~~l~tl~gH~-~~V~svafsp--dg~~LaSgs~d~~~DgtVrIWDl 1360 (1678)
+|+|+|.. ++.++++.. ++.|+.. ......+.||. ..|++++|+| +++++++|+. ||+|++||+
T Consensus 24 ~~~~~~~~-----la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~----Dg~i~iWd~ 94 (325)
T d1pgua1 24 SYDPTTNA-----IAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE----SGKVIVWGW 94 (325)
T ss_dssp EEETTTTE-----EEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET----TSEEEEEEE
T ss_pred EECCCCCE-----EEEEECCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEEC----CCCEEEEEE
T ss_conf 99899799-----999969987999976888876502899078999889999811799979999948----997798540
Q ss_pred CCCEE--------EEEEECCCCCEEEEEECCCCCCE--EEC--CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 99838--------88971378647798653999917--827--9959999799994569960467665566899987533
Q 000316 1361 TRINC--------VSGYYGHEEVVNDICVLSSSGRI--ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428 (1678)
Q Consensus 1361 ~tg~~--------l~tl~gH~~~V~sI~fsp~~~~l--aS~--DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1428 (1678)
..++. ...+..|.++|.+++|++++..+ ++. |+.+++|+..+++++..+..|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--------------- 159 (325)
T d1pgua1 95 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHS--------------- 159 (325)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCS---------------
T ss_pred CCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEEECCCCCCEEEEECC---------------
T ss_conf 58862156510025411365673779998999882201001244047888502331100120012---------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCC-EEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEE
Q ss_conf 34554443345777778378631598306767614997-99999789919999888990358861799755678751078
Q 000316 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVE-RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1429 ~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~-~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~i 1507 (1678)
..+ +++++++++. .+++++.|+.+++||..+++....+..+. .+...|.++
T Consensus 160 ---------------~~v----------~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~---~~~~~v~~v 211 (325)
T d1pgua1 160 ---------------QRI----------NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH---KQGSFVRDV 211 (325)
T ss_dssp ---------------SCE----------EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS---CTTCCEEEE
T ss_pred ---------------CCC----------CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCC---CCCCCCEEE
T ss_conf ---------------343----------2111123432068886211122111122110000000015---777752776
Q ss_pred EEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEE----EEECCCCCEEEEEECCCCEEEEECC
Q ss_conf 750897544586557998899994099299996899929999931588769----9980899999999599939999869
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT----KLAAPEDHLLVSSSLDKTLRIWDLR 1583 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~----sIaspdg~~LaSgS~DgtI~IWDl~ 1583 (1678)
+|++. .+.++++|+.|+.|++||.++++.+..+.+|...+. ++..+++++|++++.|++|+|||++
T Consensus 212 ~~~pd----------~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~ 281 (325)
T d1pgua1 212 EFSPD----------SGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT 281 (325)
T ss_dssp EECST----------TCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT
T ss_pred EECCC----------CCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 30345----------31000011233210134300122211111111111110000003689999999589939999999
Q ss_pred CCCCCCCEEEECCCCCE----EEEEEC-CCEEEEEECCC-EEEEEC
Q ss_conf 99988876950589988----999752-99999994897-599956
Q 000316 1584 RNWPSQPTVFKGHTNGI----SGFSVW-GQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1584 ~~~~~~~~~l~gH~~~V----~afSpd-g~~LaSgs~D~-I~iwdl 1623 (1678)
++ +.+..+..|...+ .++.+. +..+++++.|+ |++||+
T Consensus 282 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 282 TS--KCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp TT--EEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred CC--CEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCEEEEEEC
T ss_conf 99--788999954874067699999889999999979999999979
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.5e-33 Score=251.46 Aligned_cols=194 Identities=17% Similarity=0.047 Sum_probs=142.7
Q ss_pred CCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCC-CC
Q ss_conf 37896676335432727999999637777455620999998215776727789999850899355888510289876-13
Q 000316 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN-VA 238 (1678)
Q Consensus 160 ~~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpN-IV 238 (1678)
+.++|++++.||+|+||+||+|++. .++..||+|.+....... ++. +|+++++.++|+| |+
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~------~~~~~vAvK~~~~~~~~~----~~~--------~E~~i~~~l~~~~~i~ 66 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDI------AAGEEVAIKLECVKTKHP----QLH--------IESKIYKMMQGGVGIP 66 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEESCTTSC----CHH--------HHHHHHHHSTTSTTCC
T ss_pred ECCEEEEEEEEEECCCCEEEEEEEC------CCCCEEEEEEECHHCCCH----HHH--------HHHHHHHHCCCCCCCC
T ss_conf 8888999689850788099999998------899899999972100588----899--------9999999703899601
Q ss_pred CEEEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCC-EEE
Q ss_conf 3316999389677851389999888986199998879999999999999999989489220689989737557994-159
Q 000316 239 PVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWL 317 (1678)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~-~~i 317 (1678)
.+.+++.+.+..++||||+++++.+.+.. ....+++..+..++.|++.||+|||+++|+||||||+|||++..+. ..+
T Consensus 67 ~~~~~~~~~~~~~ivme~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~v 145 (299)
T d1ckia_ 67 TIRWCGAEGDYNVMVMELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 145 (299)
T ss_dssp CEEEEEEETTEEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCE
T ss_pred EEEEEEECCCEEEEEEEECCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEE
T ss_conf 79999951987789998738713332443-06887689999999999999999997994426678766064335777615
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99726885447888864466888842000244567642100012233332222223347
Q 000316 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1678)
Q Consensus 318 KI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~~~~~~~d~W~~G 376 (1678)
||+|||+|+............. .......||+.|||||++.+.+|+..+|+|+.|
T Consensus 146 kl~DFG~a~~~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 200 (299)
T d1ckia_ 146 YIIDFGLAKKYRDARTHQHIPY----RENKNLTGTARYASINTHLGIEQSRRDDLESLG 200 (299)
T ss_dssp EECCCSSCEECBCTTTCCBCCC----CBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHH
T ss_pred EEECCCCCEECCCCCCCCCEEC----CCCCCCCCCCCCCCHHHHHCCCCCCHHHEEECC
T ss_conf 6504675134255445541000----135776787353299999189989832188617
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-29 Score=227.49 Aligned_cols=273 Identities=15% Similarity=0.218 Sum_probs=215.8
Q ss_pred CCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEE
Q ss_conf 346789916810599998899869999199979999689-8426894126664799999149998999721789777599
Q 000316 1278 NLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1678)
Q Consensus 1278 ~~~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVr 1356 (1678)
...+|...|++++++|.+ |+|||.|++|++||++ +++++++++|.++|++++| ++++|+||+. |++|+
T Consensus 10 ~~~~~~~~V~c~~~d~~~-----l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~----D~~i~ 78 (293)
T d1p22a2 10 CRSETSKGVYCLQYDDQK-----IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS----DSTVR 78 (293)
T ss_dssp CCCSSCCCEEEEECCSSE-----EEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET----TSCEE
T ss_pred CCCCCCCCEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEC--CCCEEECCCC----CCCCC
T ss_conf 328999988999876999-----999928993999999999199999267787763423--6300210011----10110
Q ss_pred EEECCCCEEEEEEECCCCCEEEEEECCCCCCE--EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99699983888971378647798653999917--8279959999799994569960467665566899987533345544
Q 000316 1357 KWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1434 (1678)
Q Consensus 1357 IWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l--aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~ 1434 (1678)
+|++.++........+.....+.. .....+ +..++.+++||..+..........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 134 (293)
T d1p22a2 79 VWDVNTGEMLNTLIHHCEAVLHLR--FNNGMMVTCSKDRSIAVWDMASPTDITLRRVL---------------------- 134 (293)
T ss_dssp EEESSSCCEEEEECCCCSCEEEEE--CCTTEEEEEETTSCEEEEECSSSSCCEEEEEE----------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCC--CCCCCEEECCCCCCEEEEECCCCCCCCCCCCC----------------------
T ss_conf 000024641001111110000111--11100000135663068613445444212100----------------------
Q ss_pred CCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCC
Q ss_conf 43345777778378631598306767614997999997899199998889903588617997556787510787508975
Q 000316 1435 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1514 (1678)
Q Consensus 1435 ~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~ 1514 (1678)
..+...+....+. ...+++++.|+++++||.++++.+..+.++.. .+..+.+
T Consensus 135 -----~~~~~~v~~~~~~------------~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~------~v~~~~~----- 186 (293)
T d1p22a2 135 -----VGHRAAVNVVDFD------------DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR------GIACLQY----- 186 (293)
T ss_dssp -----CCCSSCEEEEEEE------------TTEEEEEETTSEEEEEETTTCCEEEEEECCSS------CEEEEEE-----
T ss_pred -----CCCCCCCCCCEEC------------CCCCCCCCCCCCEEEECCCCCCEEEEECCCCC------CCCCCCC-----
T ss_conf -----0113543110000------------02201106998604100788838899715544------5322168-----
Q ss_pred CCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCC-------C
Q ss_conf 445865579988999940992999968999299999315887699980899999999599939999869999-------8
Q 000316 1515 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNW-------P 1587 (1678)
Q Consensus 1515 ~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIaspdg~~LaSgS~DgtI~IWDl~~~~-------~ 1587 (1678)
++..+++|+.||.|++||.+++..+..+.+|...+..+ ++++.+|++|+.||+|++||+.... .
T Consensus 187 --------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~-~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 257 (293)
T d1p22a2 187 --------RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCI-RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGT 257 (293)
T ss_dssp --------ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE-ECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTT
T ss_pred --------CCCEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEC-CCCCEEEEEECCCCEEEEEECCCCCCCCCCCCC
T ss_conf --------98758876589989998665561466521431000001-454107999867997999988888644456775
Q ss_pred CCCEEEECCCCCEEEEEECCCEEEEEECCC-EEEEE
Q ss_conf 887695058998899975299999994897-59995
Q 000316 1588 SQPTVFKGHTNGISGFSVWGQDVISISNNK-IGLSS 1622 (1678)
Q Consensus 1588 ~~~~~l~gH~~~V~afSpdg~~LaSgs~D~-I~iwd 1622 (1678)
.....+.+|.+.|.++++++.+|+||+.|+ |++||
T Consensus 258 ~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 258 LCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp TEEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC
T ss_pred EEEEEECCCCCCEEEEEECCCEEEEEECCCEEEEEC
T ss_conf 455784588998899997199999992299899959
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-33 Score=249.90 Aligned_cols=187 Identities=15% Similarity=0.041 Sum_probs=144.0
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCE
Q ss_conf 78966763354327279999996377774556209999982157767277899998508993558885102898761333
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpNIV~l 240 (1678)
..+|.+.+.||+|+||.||+|+. ++..||||++.... ..++.+. +|+..+..++|||||++
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--------~g~~vAvK~~~~~~-----~~~~~~e------~ei~~~~~~~HpnIv~~ 62 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSRE-----ERSWFRE------AEIYQTVMLRHENILGF 62 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--------TTEEEEEEEECGGG-----HHHHHHH------HHHHTSTTCCCTTBCCE
T ss_pred CCEEEEEEEEEECCCEEEEEEEE--------CCEEEEEEEECCCC-----HHHHHHH------HHHHHHHHCCCCCCCCE
T ss_conf 86899988982078819999999--------99899999987200-----4679999------99999962799868326
Q ss_pred EEEEEECC----EEEEECCCCC-CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCEECCCCCCCE
Q ss_conf 16999389----6778513899-998889861999988799999999999999999894--------8922068998973
Q 000316 241 LGLLKTSG----LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--------LGIAHRSVCPSNV 307 (1678)
Q Consensus 241 ~~~~~~~~----~l~lV~E~~~-g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~--------~~IiHRDLKP~NI 307 (1678)
++++.+.+ .+|+|||||+ |+|.++++. ..++......++.|++.||.|+|+ ++|+||||||+||
T Consensus 63 ~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NI 139 (303)
T d1vjya_ 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 139 (303)
T ss_dssp EEEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGE
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCE
T ss_conf 88998379860489999964669898999865---899989999999999999999887665204689866153173135
Q ss_pred EECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCC
Q ss_conf 755799415999726885447888864466888842000244567642100012233------33222222334765
Q 000316 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM------DWHSQFNRWWRGEL 378 (1678)
Q Consensus 308 Ll~~~g~~~iKI~DFGlar~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPEil~~~------~~~~~~d~W~~G~i 378 (1678)
|++.++ .+||+|||+++........... ......||+.|+|||++... .++.++|+|++|++
T Consensus 140 Ll~~~~--~~Kl~DFGl~~~~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvv 207 (303)
T d1vjya_ 140 LVKKNG--TCCIADLGLAVRHDSATDTIDI-------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207 (303)
T ss_dssp EECTTS--CEEECCCTTCEEEETTTTEECC-----------CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred EECCCC--CEEEEECCCCCCCCCCCCCEEC-------CCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 786887--7688763866234677762001-------3552503547678221056545467776750122015999
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.1e-31 Score=237.10 Aligned_cols=328 Identities=16% Similarity=0.180 Sum_probs=223.0
Q ss_pred CCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECC-CC------EEEEECCCCCCEEEEEEEC-------CCCE
Q ss_conf 02346789916810599998899869999199979999689-84------2689412666479999914-------9998
Q 000316 1276 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK-AS------ILSSIRAHHGALRSVAVGQ-------DECT 1341 (1678)
Q Consensus 1276 ~~~~~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~------~l~tl~gH~~~V~svafsp-------dg~~ 1341 (1678)
.....+|.+.|++.+..+.+ ++|+|.|+++++|+.. .. .......|...+..+.... ++..
T Consensus 7 ~~~~~~H~~~I~~v~~~~~~-----l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSACNSF-----TVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 81 (393)
T ss_dssp EEESSCSSSCEEEEEECSSE-----EEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred EECCCCCCCCCEEEEEECCE-----EEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCE
T ss_conf 52087636712799996999-----9999799969987898788776540467654204771676667500157998768
Q ss_pred EEEEECCCCCCCEEEEEECCCCEEEE-----EE-----ECCCCCEEEEEECCCCC-----CE--EECCCCEEEEECCCCC
Q ss_conf 99972178977759999699983888-----97-----13786477986539999-----17--8279959999799994
Q 000316 1342 VFTAGIGPGFKGTVQKWELTRINCVS-----GY-----YGHEEVVNDICVLSSSG-----RI--ASCDGTLHVWNSQTGK 1404 (1678)
Q Consensus 1342 LaSgs~d~~~DgtVrIWDl~tg~~l~-----tl-----~gH~~~V~sI~fsp~~~-----~l--aS~DgtIkIWD~~tg~ 1404 (1678)
+++++. |++|++|++....... .. ..+...+..++|.+... .+ ++.|+++++|++....
T Consensus 82 ~~s~~~----dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~ 157 (393)
T d1sq9a_ 82 VATTSF----SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 157 (393)
T ss_dssp EEEEET----TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred EEEEEC----CCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCC
T ss_conf 999948----9919999822898205651245632431157896689998447886542179998389819998740477
Q ss_pred EEE-EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 569-9604676655668999875333455444334577777837863159830676761499799999789919999888
Q 000316 1405 LLS-VFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1678)
Q Consensus 1405 ~i~-~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~ 1483 (1678)
... .+..+... ... ..............+++++++|++ .+++|+.|++|++||+.
T Consensus 158 ~~~~~~~~~~~~----------~~~-------------~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~ 213 (393)
T d1sq9a_ 158 DESNSLTLNWSP----------TLE-------------LQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS 213 (393)
T ss_dssp SHHHHTTTCCCC----------EEE-------------EEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT
T ss_pred CCCCEEEEEECC----------CEE-------------CCCCEECCCCCCCCEEEEEECCCC-EEEEEECCCCEEEEEEC
T ss_conf 534102331032----------000-------------145100025789867899978999-89999389829998602
Q ss_pred CCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCC---EEEEEECCCCCEEEEEE---------
Q ss_conf 990358861799755678751078750897544586557998899994099---29999689992999993---------
Q 000316 1484 QGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG---QCRLFDVRSGNVIASWR--------- 1551 (1678)
Q Consensus 1484 tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg---~I~iWD~rtg~~i~~l~--------- 1551 (1678)
+++++..+.......+|...|++++|+ |+|++|++|+.|+ .|++||+.+++.+..+.
T Consensus 214 ~~~~~~~~~~~~~l~~h~~~V~~l~~s-----------pdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~ 282 (393)
T d1sq9a_ 214 TLRPLYNFESQHSMINNSNSIRSVKFS-----------PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS 282 (393)
T ss_dssp TTEEEEEEECCC---CCCCCEEEEEEC-----------SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-------
T ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCC-----------CCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCE
T ss_conf 332110000111112425638770046-----------653201124289884210010353213444311566664310
Q ss_pred ----CCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE------EEEECCCEEEEEECCCEEE
Q ss_conf ----1588769998-0899999999599939999869999888769505899889------9975299999994897599
Q 000316 1552 ----AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS------GFSVWGQDVISISNNKIGL 1620 (1678)
Q Consensus 1552 ----gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~------afSpdg~~LaSgs~D~I~i 1620 (1678)
+|...|++++ +|++++|+|||.|++|++||+.++ .++.++++|.+.|. +|++++..+++++...++.
T Consensus 283 ~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g--~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (393)
T d1sq9a_ 283 LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK--ERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKF 360 (393)
T ss_dssp -CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEE
T ss_pred EEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCCC--CEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCEEEE
T ss_conf 232023586660013898880698779998999999999--799999886876137734899999999999831246998
Q ss_pred EECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEEC
Q ss_conf 956778897896100031023430698765748999994499899999489839990
Q 000316 1621 SSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1621 wdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIw 1677 (1678)
|.-. ... ... ......|++++.|+.||+|
T Consensus 361 ~~~~-----~~~----------------~~~-------~~~~~~~~~~~~d~~ir~~ 389 (393)
T d1sq9a_ 361 LKKG-----WRS----------------GMG-------ADLNESLCCVCLDRSIRWF 389 (393)
T ss_dssp ECTT-----TSB----------------STT-------CTTSCEEEEEETTTEEEEE
T ss_pred CCCC-----CEE----------------CCC-------CCCCCEEEEEECCCEEEEE
T ss_conf 8667-----663----------------123-------6889979999919908999
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=3.5e-28 Score=216.40 Aligned_cols=284 Identities=13% Similarity=0.077 Sum_probs=158.7
Q ss_pred CEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCC--EEEEEEECCC-CCEEEEEECCC--CCCEE--ECCCCEEEEECC
Q ss_conf 47999991499989997217897775999969998--3888971378-64779865399--99178--279959999799
Q 000316 1329 ALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--NCVSGYYGHE-EVVNDICVLSS--SGRIA--SCDGTLHVWNSQ 1401 (1678)
Q Consensus 1329 ~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg--~~l~tl~gH~-~~V~sI~fsp~--~~~la--S~DgtIkIWD~~ 1401 (1678)
.+.+++|+|++..++.++.+ ...|+.|+.... .....+.||. ..|++++|+|. +.+++ +.||+|++||..
T Consensus 19 ~~t~l~~~~~~~~la~~~~~---~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~ 95 (325)
T d1pgua1 19 FTTHLSYDPTTNAIAYPCGK---SAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWT 95 (325)
T ss_dssp CCCCCEEETTTTEEEEEETT---EEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEECC---CEEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEEC
T ss_conf 84799998997999999699---879999768888765028990789998899998117999799999489977985405
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC--CCCEEE
Q ss_conf 994569960467665566899987533345544433457777783786315983067676149979999978--991999
Q 000316 1402 TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG--NGSLRF 1479 (1678)
Q Consensus 1402 tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~--DgtIki 1479 (1678)
.++....+..+... ....+...+.++++++++..+++++. ++.+++
T Consensus 96 ~~~~~~~~~~~~~~--------------------------------~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~ 143 (325)
T d1pgua1 96 FDKESNSVEVNVKS--------------------------------EFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVF 143 (325)
T ss_dssp EEGGGTEEEEEEEE--------------------------------EEECCSSCEEEEEECTTSSEEEEEECCSSCSEEE
T ss_pred CCCCEEEEECCCCC--------------------------------CCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEE
T ss_conf 88621565100254--------------------------------1136567377999899988220100124404788
Q ss_pred EECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEE---CCCCC
Q ss_conf 988899035886179975567875107875089754458655799889999409929999689992999993---15887
Q 000316 1480 IDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR---AHDGY 1556 (1678)
Q Consensus 1480 WDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~---gH~~~ 1556 (1678)
|+..+++++..+.+| ...|.+++|.+... ..+++++.|+.+++||..+++....+. +|...
T Consensus 144 ~~~~~~~~~~~~~~h------~~~v~~~~~~~~~~----------~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 207 (325)
T d1pgua1 144 ISWDSGNSLGEVSGH------SQRINACHLKQSRP----------MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSF 207 (325)
T ss_dssp EETTTCCEEEECCSC------SSCEEEEEECSSSS----------CEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCC
T ss_pred EEECCCCCCEEEEEC------CCCCCCCCCCCCCC----------CEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 850233110012001------23432111123432----------06888621112211112211000000001577775
Q ss_pred EEEEE-CCC-CCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EEE---ECCCEEEEEECCC-EEEEECCCCCC
Q ss_conf 69998-089-9999999599939999869999888769505899889--997---5299999994897-59995677889
Q 000316 1557 VTKLA-APE-DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFS---VWGQDVISISNNK-IGLSSLSKSAD 1628 (1678)
Q Consensus 1557 V~sIa-spd-g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afS---pdg~~LaSgs~D~-I~iwdl~~~~~ 1628 (1678)
|++++ +|+ +.++++++.|+.|++||++++ +.+..+.+|...+. .|+ +++++|++++.|+ |++||+.
T Consensus 208 v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~--~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~---- 281 (325)
T d1pgua1 208 VRDVEFSPDSGEFVITVGSDRKISCFDGKSG--EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT---- 281 (325)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEETTTC--CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT----
T ss_pred CEEEEECCCCCEECCCCCCCCCEEEEEECCC--CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECC----
T ss_conf 2776303453100001123321013430012--2211111111111110000003689999999589939999999----
Q ss_pred CCCCCEECCCEEEEEECCCCCCC--CEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 78961000310234306987657--489999944998999994898399909
Q 000316 1629 EDGQHRLVPQKLYMVDNGAKNLS--VLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1629 ~~g~~~~~~~kl~~~~~g~~h~~--~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
.++. .+.+. .+.+.. ...++.|.++ ..+++|+.||.|++||
T Consensus 282 -~~~~----~~~~~---~~~~~~~~~~~~~~~~~~-~~l~s~s~dg~i~vwd 324 (325)
T d1pgua1 282 -TSKC----VQKWT---LDKQQLGNQQVGVVATGN-GRIISLSLDGTLNFYE 324 (325)
T ss_dssp -TTEE----EEEEE---CCTTCGGGCEEEEEEEET-TEEEEEETTSCEEEEE
T ss_pred -CCCE----EEEEE---ECCCCCCCEEEEEEECCC-CEEEEEECCCEEEEEE
T ss_conf -9978----89999---548740676999998899-9999997999999997
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.6e-28 Score=217.38 Aligned_cols=265 Identities=14% Similarity=0.178 Sum_probs=195.4
Q ss_pred CEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE-EECCCCEE
Q ss_conf 42689412666479999914999899972178977759999699983888971378647798653999917-82799599
Q 000316 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLH 1396 (1678)
Q Consensus 1318 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l-aS~DgtIk 1396 (1678)
+.+++++||.++|++++|++ |+||+. ||+|++||+.++ ..+|...|.++++.++...+ ++.|++|+
T Consensus 4 ~~i~~l~gH~~~I~~l~~s~----l~sgs~----Dg~v~~Wd~~~~-----~~~h~~~V~~~~~~~~~~~~s~s~D~~v~ 70 (287)
T d1pgua2 4 EVLKTISGHNKGITALTVNP----LISGSY----DGRIMEWSSSSM-----HQDHSNLIVSLDNSKAQEYSSISWDDTLK 70 (287)
T ss_dssp EEEEEECCCSSCEEEEETTT----TEEEET----TSCEEETTTTEE-----ECCCCSCEEEEECCSTTCCEEEETTTEEE
T ss_pred CEEEEECCCCCCEEEEEECC----EEEEEC----CCEEEEEECCCC-----CCCCCCCEEEEEECCCCEEEEEEECCCCC
T ss_conf 03499988798649999895----789848----991999989998-----88877878999965997289886101222
Q ss_pred EEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 99799994569960467665566899987533345544433457777783786315983067676149979999978991
Q 000316 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1678)
Q Consensus 1397 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~Dgt 1476 (1678)
+|+....+. . ....++.+.+++..++ .+.++.
T Consensus 71 ~w~~~~~~~----~-------------------------------------------~~~~~~~~~~~~~~~~-~~~~~~ 102 (287)
T d1pgua2 71 VNGITKHEF----G-------------------------------------------SQPKVASANNDGFTAV-LTNDDD 102 (287)
T ss_dssp ETTEEEEEC----S-------------------------------------------SCEEEEEECSSSEEEE-EETTSE
T ss_pred CCCCCCCCC----C-------------------------------------------CCEEEEEECCCCCEEE-EEECCC
T ss_conf 111111111----2-------------------------------------------2101466416785699-960332
Q ss_pred EEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCC-EEEEEECCCCCEEEEEE-CCC
Q ss_conf 9999888990358861799755678751078750897544586557998899994099-29999689992999993-158
Q 000316 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG-QCRLFDVRSGNVIASWR-AHD 1554 (1678)
Q Consensus 1477 IkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg-~I~iWD~rtg~~i~~l~-gH~ 1554 (1678)
+.+|+..+++.+..+.... .+.+++ ++++.+++++.++ .+++|+....+....+. .|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~-------~~~~~~-------------~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~ 162 (287)
T d1pgua2 103 LLILQSFTGDIIKSVRLNS-------PGSAVS-------------LSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLR 162 (287)
T ss_dssp EEEEETTTCCEEEEEECSS-------CEEEEE-------------ECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCS
T ss_pred CEEEECCCEEEEEECCCCC-------EEEEEE-------------CCCCCEEEECCCCCEEEEEECCCCCEEEEEEECCC
T ss_conf 1000011003543101222-------035652-------------14751110002210002100012210001210247
Q ss_pred CCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE--EEE----------CCCEEEEEECCC-EEE
Q ss_conf 8769998-08999999995999399998699998887695058998899--975----------299999994897-599
Q 000316 1555 GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG--FSV----------WGQDVISISNNK-IGL 1620 (1678)
Q Consensus 1555 ~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a--fSp----------dg~~LaSgs~D~-I~i 1620 (1678)
..+++++ +|++.+|++|+.||.|++||+.++. .....+.+|...|.+ |+| ++.++++|+.|+ |++
T Consensus 163 ~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~i 241 (287)
T d1pgua2 163 AKPSYISISPSETYIAAGDVMGKILLYDLQSRE-VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 241 (287)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEECCCC-CCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEE
T ss_conf 853699951676521101111110000002332-1100011111111000001365410012678870276649995999
Q ss_pred EECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 9567788978961000310234306987657489999944998999994898399909
Q 000316 1621 SSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1621 wdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
|++.... +...... +|.+.|++++|+|++ .|++++.||.|++|+
T Consensus 242 w~~~~~~-----------~~~~~~~--~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~ 285 (287)
T d1pgua2 242 YSVKRPM-----------KIIKALN--AHKDGVNNLLWETPS-TLVSSGADACIKRWN 285 (287)
T ss_dssp EESSCTT-----------CCEEETT--SSTTCEEEEEEEETT-EEEEEETTSCEEEEE
T ss_pred EECCCCC-----------EEEEEEC--CCCCCEEEEEECCCC-EEEEEECCCEEEEEE
T ss_conf 8889997-----------5899927--878985899998999-899997999299999
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=4e-28 Score=215.97 Aligned_cols=289 Identities=10% Similarity=0.059 Sum_probs=174.6
Q ss_pred CCCCCCCCEEE--ECCCCCCCCCCEEEEEECCCCEEEEECC-CC---EEEEECCCCCCEEEEEEECCC-CEEEEEECCCC
Q ss_conf 34678991681--0599998899869999199979999689-84---268941266647999991499-98999721789
Q 000316 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-AS---ILSSIRAHHGALRSVAVGQDE-CTVFTAGIGPG 1350 (1678)
Q Consensus 1278 ~~~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~---~l~tl~gH~~~V~svafspdg-~~LaSgs~d~~ 1350 (1678)
...+|++.|++ |||++.+ |++||.|+++++||+. +. .+....+|.++|.+++|++++ ..+++|+.
T Consensus 6 ~~~~h~d~I~~l~fsp~~~~-----L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~--- 77 (342)
T d1yfqa_ 6 IEQAPKDYISDIKIIPSKSL-----LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV--- 77 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTE-----EEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---
T ss_pred CCCCCCCCEEEEEEECCCCE-----EEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCC---
T ss_conf 68899897888999589999-----9999799929999756998636898855899988999995899978998126---
Q ss_pred CCCEEEEEECCCCEEEEEEECCCCCEEE-EEECCCCCCE--EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 7775999969998388897137864779-8653999917--827995999979999456996046766556689998753
Q 000316 1351 FKGTVQKWELTRINCVSGYYGHEEVVND-ICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1678)
Q Consensus 1351 ~DgtVrIWDl~tg~~l~tl~gH~~~V~s-I~fsp~~~~l--aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~ 1427 (1678)
|++|++|+...+........+...+.. ..+.++...+ ++.|+++++||++++........+.....
T Consensus 78 -d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~---------- 146 (342)
T d1yfqa_ 78 -QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN---------- 146 (342)
T ss_dssp -TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS----------
T ss_pred -CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCC----------
T ss_conf -531145420443200000111111111111111111111101222111020234443302300024300----------
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEE
Q ss_conf 33455444334577777837863159830676761499799999789919999888990358861799755678751078
Q 000316 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1678)
Q Consensus 1428 ~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~i 1507 (1678)
.........+.+.+..+++++.|+.|++||++..+.......... ......+.
T Consensus 147 ------------------------~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 199 (342)
T d1yfqa_ 147 ------------------------TKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESG---LKYQIRDV 199 (342)
T ss_dssp ------------------------SSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECS---CSSCEEEE
T ss_pred ------------------------CCCEEEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCEEEEECC---CCCCEEEE
T ss_conf ------------------------120000010001687024651798478876056763411121025---42210146
Q ss_pred EEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCC---------EEEE------EECCCCCEEEEE-CCCCCEEEEE
Q ss_conf 75089754458655799889999409929999689992---------9999------931588769998-0899999999
Q 000316 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN---------VIAS------WRAHDGYVTKLA-APEDHLLVSS 1571 (1678)
Q Consensus 1508 a~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~---------~i~~------l~gH~~~V~sIa-spdg~~LaSg 1571 (1678)
+..+ .++..+++++.||.+.+|+..... .... ..+|...|++++ +|++++|+||
T Consensus 200 ~~~~----------~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg 269 (342)
T d1yfqa_ 200 ALLP----------KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp EECS----------GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred EEEC----------CCCCEEEEECCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEEEE
T ss_conf 7636----------999878865489959999805986401112351256555314777623543159966984479998
Q ss_pred ECCCCEEEEECCCCCCCCCEEEE-CCCCCEEEEEECCCEEEEEECCC-EEEEECC
Q ss_conf 59993999986999988876950-58998899975299999994897-5999567
Q 000316 1572 SLDKTLRIWDLRRNWPSQPTVFK-GHTNGISGFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1572 S~DgtI~IWDl~~~~~~~~~~l~-gH~~~V~afSpdg~~LaSgs~D~-I~iwdl~ 1624 (1678)
+.||+|++||+.++ +.+..+. .|...+.+|+++++.+++++.|. +++|...
T Consensus 270 ~~Dg~v~vWD~~~~--~~l~~~~~~~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~ 322 (342)
T d1yfqa_ 270 GSDGIISCWNLQTR--KKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp ETTSCEEEEETTTT--EEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHHCSSS
T ss_pred CCCCEEEEEECCCC--CEEEEECCCCCCEEEEEEECCCEEEEEECCCCEEEEEEE
T ss_conf 79998999999989--498870589998799999479999999919927883012
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.5e-26 Score=204.55 Aligned_cols=265 Identities=15% Similarity=0.180 Sum_probs=203.7
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCE
Q ss_conf 00234678991681059999889986999919997999968984268941266647999991499989997217897775
Q 000316 1275 ATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1275 ~~~~~~gH~~~V~~fSpdg~~~~~~~LasgS~D~~v~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1354 (1678)
...++.||.+.|.+..-+ . |+|||.|+++++||... ..++|.+.|.++++++++ .+++++. |++
T Consensus 5 ~i~~l~gH~~~I~~l~~s--~-----l~sgs~Dg~v~~Wd~~~----~~~~h~~~V~~~~~~~~~-~~~s~s~----D~~ 68 (287)
T d1pgua2 5 VLKTISGHNKGITALTVN--P-----LISGSYDGRIMEWSSSS----MHQDHSNLIVSLDNSKAQ-EYSSISW----DDT 68 (287)
T ss_dssp EEEEECCCSSCEEEEETT--T-----TEEEETTSCEEETTTTE----EECCCCSCEEEEECCSTT-CCEEEET----TTE
T ss_pred EEEEECCCCCCEEEEEEC--C-----EEEEECCCEEEEEECCC----CCCCCCCCEEEEEECCCC-EEEEEEE----CCC
T ss_conf 349998879864999989--5-----78984899199998999----888877878999965997-2898861----012
Q ss_pred EEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE-EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999699983888971378647798653999917-827995999979999456996046766556689998753334554
Q 000316 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1678)
Q Consensus 1355 VrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l-aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~ 1433 (1678)
|++|+..+.+ ....+..+++.+++..+ .+.++.+.+|+..+++.+..+....
T Consensus 69 v~~w~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------- 121 (287)
T d1pgua2 69 LKVNGITKHE-------FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS-------------------- 121 (287)
T ss_dssp EEETTEEEEE-------CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSS--------------------
T ss_pred CCCCCCCCCC-------CCCCEEEEEECCCCCEEEEEECCCCEEEECCCEEEEEECCCCC--------------------
T ss_conf 2211111111-------1221014664167856999603321000011003543101222--------------------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCC-CEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECC
Q ss_conf 443345777778378631598306767614997999997899-1999988899035886179975567875107875089
Q 000316 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG-SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1434 ~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~Dg-tIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~ 1512 (1678)
.+.++++++..+++++.|+ .+++|++...+........ +...+.+++|+
T Consensus 122 -----------------------~~~~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s-- 171 (287)
T d1pgua2 122 -----------------------PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP-----LRAKPSYISIS-- 171 (287)
T ss_dssp -----------------------CEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSC-----CSSCEEEEEEC--
T ss_pred -----------------------EEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEEC-----CCCCEEEEEEC--
T ss_conf -----------------------035652147511100022100021000122100012102-----47853699951--
Q ss_pred CCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEE-EEECCCCCEEEEE-CC----------CCCEEEEEECCCCEEEE
Q ss_conf 754458655799889999409929999689992999-9931588769998-08----------99999999599939999
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA-SWRAHDGYVTKLA-AP----------EDHLLVSSSLDKTLRIW 1580 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~-~l~gH~~~V~sIa-sp----------dg~~LaSgS~DgtI~IW 1580 (1678)
|++.++++|+.||.|++||+.++.... .+.+|...|++++ +| ++.+++||+.|++|++|
T Consensus 172 ---------~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw 242 (287)
T d1pgua2 172 ---------PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIY 242 (287)
T ss_dssp ---------TTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEE
T ss_pred ---------CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEE
T ss_conf ---------67652110111111000000233211000111111110000013654100126788702766499959998
Q ss_pred ECCCCCCCCCEEEECCCCCEEE--EEECCCEEEEEECCC-EEEEEC
Q ss_conf 8699998887695058998899--975299999994897-599956
Q 000316 1581 DLRRNWPSQPTVFKGHTNGISG--FSVWGQDVISISNNK-IGLSSL 1623 (1678)
Q Consensus 1581 Dl~~~~~~~~~~l~gH~~~V~a--fSpdg~~LaSgs~D~-I~iwdl 1623 (1678)
|++++. .....+.+|...|++ |++++ .+++++.|+ |++|++
T Consensus 243 ~~~~~~-~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 243 SVKRPM-KIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp ESSCTT-CCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred ECCCCC-EEEEEECCCCCCEEEEEECCCC-EEEEEECCCEEEEEEE
T ss_conf 889997-5899927878985899998999-8999979992999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.1e-27 Score=212.77 Aligned_cols=291 Identities=10% Similarity=0.048 Sum_probs=201.0
Q ss_pred CEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEE---EEEECCCCCEEEEEECCCCCC-E--EEC
Q ss_conf 4268941266647999991499989997217897775999969998388---897137864779865399991-7--827
Q 000316 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV---SGYYGHEEVVNDICVLSSSGR-I--ASC 1391 (1678)
Q Consensus 1318 ~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l---~tl~gH~~~V~sI~fsp~~~~-l--aS~ 1391 (1678)
++++..++|.+.|++++|+|++++|++||. |++|++||+.++... ....+|.++|.+++|+++++. + ++.
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~----Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~ 77 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSW----DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV 77 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEET----TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET
T ss_pred CEEECCCCCCCCEEEEEEECCCCEEEEEEC----CCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCC
T ss_conf 759768899897888999589999999979----9929999756998636898855899988999995899978998126
Q ss_pred CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEE
Q ss_conf 99599997999945699604676655668999875333455444334577777837863159830676761499799999
Q 000316 1392 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG 1471 (1678)
Q Consensus 1392 DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsg 1471 (1678)
|++|++|+...+........+.. .........++...++++
T Consensus 78 d~~v~~w~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~ 118 (342)
T d1yfqa_ 78 QGEILKVDLIGSPSFQALTNNEA---------------------------------------NLGICRICKYGDDKLIAA 118 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCC---------------------------------------CSCEEEEEEETTTEEEEE
T ss_pred CCCEEEEECCCCCCCCCCCCCCC---------------------------------------CCCCCCCCCCCCCCCCCC
T ss_conf 53114542044320000011111---------------------------------------111111111111111110
Q ss_pred ECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEE---E
Q ss_conf 7899199998889903588617997556787510787508975445865579988999940992999968999299---9
Q 000316 1472 IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI---A 1548 (1678)
Q Consensus 1472 s~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i---~ 1548 (1678)
+.|+++++||++++......................++. +.++.+++++.|+.|++||++++... .
T Consensus 119 ~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 187 (342)
T d1yfqa_ 119 SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD-----------TNSSRLIVGMNNSQVQWFRLPLCEDDNGTI 187 (342)
T ss_dssp ETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE-----------ECSSEEEEEESTTEEEEEESSCCTTCCCEE
T ss_pred CCCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEEEE-----------CCCCCEEEECCCCCEEEEECCCCCCCCEEE
T ss_conf 122211102023444330230002430012000001000-----------168702465179847887605676341112
Q ss_pred EEECCCCCEEEEE--CCCCCEEEEEECCCCEEEEECCCCCCCC----CE---------EEECCCCCEE--EEEECCCEEE
Q ss_conf 9931588769998--0899999999599939999869999888----76---------9505899889--9975299999
Q 000316 1549 SWRAHDGYVTKLA--APEDHLLVSSSLDKTLRIWDLRRNWPSQ----PT---------VFKGHTNGIS--GFSVWGQDVI 1611 (1678)
Q Consensus 1549 ~l~gH~~~V~sIa--spdg~~LaSgS~DgtI~IWDl~~~~~~~----~~---------~l~gH~~~V~--afSpdg~~La 1611 (1678)
....+...+.+.. ..++..+++++.||.+.+|+........ .. ...+|...|+ +|+|++++|+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~la 267 (342)
T d1yfqa_ 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY 267 (342)
T ss_dssp EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE
T ss_pred EECCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCEEE
T ss_conf 10254221014676369998788654899599998059864011123512565553147776235431599669844799
Q ss_pred EEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEEC
Q ss_conf 994897-599956778897896100031023430698765748999994499899999489839990
Q 000316 1612 SISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLC 1677 (1678)
Q Consensus 1612 Sgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIw 1677 (1678)
||+.|| |++||+.. +. .+.... +...+..++|+|++..|++|+.|+.+++|
T Consensus 268 sg~~Dg~v~vWD~~~-----~~------~l~~~~----~~~~~~~~~~s~~~~~l~~a~sdd~~~~~ 319 (342)
T d1yfqa_ 268 TAGSDGIISCWNLQT-----RK------KIKNFA----KFNEDSVVKIACSDNILCLATSDDTFKTN 319 (342)
T ss_dssp EEETTSCEEEEETTT-----TE------EEEECC----CCSSSEEEEEEECSSEEEEEEECTHHHHC
T ss_pred EECCCCEEEEEECCC-----CC------EEEEEC----CCCCCEEEEEEECCCEEEEEECCCCEEEE
T ss_conf 987999899999998-----94------988705----89998799999479999999919927883
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=7.2e-27 Score=206.83 Aligned_cols=291 Identities=10% Similarity=0.130 Sum_probs=185.8
Q ss_pred EEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEE------EEEEECCCCCEEEEEE------CCCCC-
Q ss_conf 6894126664799999149998999721789777599996999838------8897137864779865------39999-
Q 000316 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC------VSGYYGHEEVVNDICV------LSSSG- 1386 (1678)
Q Consensus 1320 l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~------l~tl~gH~~~V~sI~f------sp~~~- 1386 (1678)
....+||.+.|+++++++ ++++|||. |++|++||..+.+. ......|...+..+.. .....
T Consensus 7 ~~~~~~H~~~I~~v~~~~--~~l~S~S~----D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSACN--SFTVSCSG----DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80 (393)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEET----TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred EECCCCCCCCCEEEEEEC--CEEEEEEC----CCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCC
T ss_conf 520876367127999969--99999979----996998789878877654046765420477167666750015799876
Q ss_pred CEEE--CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECC
Q ss_conf 1782--79959999799994569960467665566899987533345544433457777783786315983067676149
Q 000316 1387 RIAS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIEC 1464 (1678)
Q Consensus 1387 ~laS--~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~ 1464 (1678)
.+++ .||+|++|+.........+..+... ..........+.++.+.... ....
T Consensus 81 ~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~-----~~~~ 135 (393)
T d1sq9a_ 81 LVATTSFSGDLLFYRITREDETKKVIFEKLD--------------------LLDSDMKKHSFWALKWGASN-----DRLL 135 (393)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEEC--------------------CSCTTGGGSCEEEEEEECCC---------
T ss_pred EEEEEECCCCEEEEECCCCCCEEEEECCCCC--------------------EEEECCCCCCEEEEEEECCC-----CCCC
T ss_conf 8999948991999982289820565124563--------------------24311578966899984478-----8654
Q ss_pred CCEEEEEECCCCEEEEECCCCEE-----------EEEE-ECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 97999997899199998889903-----------5886-17997556787510787508975445865579988999940
Q 000316 1465 VERLVVGIGNGSLRFIDINQGQK-----------LHLW-RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1678)
Q Consensus 1465 g~~Lvsgs~DgtIkiWDl~tg~~-----------i~~l-~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~ 1532 (1678)
+..+++++.|+++++||+..... ...+ ............+.+++++ +++ ++++|+.
T Consensus 136 ~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s-----------~dg-~lasgs~ 203 (393)
T d1sq9a_ 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS-----------ERG-LIATGFN 203 (393)
T ss_dssp CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEEC-----------TTS-EEEEECT
T ss_pred CCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCEECCCCEECCCCCCCCEEEEEEC-----------CCC-EEEEEEC
T ss_conf 2179998389819998740477534102331032000145100025789867899978-----------999-8999938
Q ss_pred CCEEEEEECCCCCEEEEE------ECCCCCEEEEE-CCCCCEEEEEECCCC---EEEEECCCCCCCCCEEE---------
Q ss_conf 992999968999299999------31588769998-089999999959993---99998699998887695---------
Q 000316 1533 SGQCRLFDVRSGNVIASW------RAHDGYVTKLA-APEDHLLVSSSLDKT---LRIWDLRRNWPSQPTVF--------- 1593 (1678)
Q Consensus 1533 Dg~I~iWD~rtg~~i~~l------~gH~~~V~sIa-spdg~~LaSgS~Dgt---I~IWDl~~~~~~~~~~l--------- 1593 (1678)
||+|++||+.+++++..+ .+|..+|++++ +|++++|++|+.|++ |++||+.++ ..+..+
T Consensus 204 Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g--~~~~~l~~~~~~~~~ 281 (393)
T d1sq9a_ 204 NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--ERIGSLSVPTHSSQA 281 (393)
T ss_dssp TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--CEEEEECBC------
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEECCCCCC--EEEEEECCCCCCCCC
T ss_conf 982999860233211000011111242563877004665320112428988421001035321--344431156666431
Q ss_pred ----ECCCCCEEE--EEECCCEEEEEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEE----EEEEECCC
Q ss_conf ----058998899--975299999994897-5999567788978961000310234306987657489----99994499
Q 000316 1594 ----KGHTNGISG--FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLS----SISILPFS 1662 (1678)
Q Consensus 1594 ----~gH~~~V~a--fSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~----siafsPd~ 1662 (1678)
.||.+.|++ |+|++++|+||+.|+ |++||+. .|+. ..... +|.+.|. .++|+|++
T Consensus 282 ~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~-----~g~~-------~~~l~--gH~~~v~~~~~~~~~~~~~ 347 (393)
T d1sq9a_ 282 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK-----TKER-------ITTLN--MHCDDIEIEEDILAVDEHG 347 (393)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT-----TTEE-------EEEEE--CCGGGCSSGGGCCCBCTTS
T ss_pred EEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECC-----CCCE-------EEEEC--CCCCCCCCCCCEEEECCCC
T ss_conf 02320235866600138988806987799989999999-----9979-------99998--8687613773489999999
Q ss_pred CEEEEEE
Q ss_conf 8999994
Q 000316 1663 RLFLVGT 1669 (1678)
Q Consensus 1663 ~lLatgs 1669 (1678)
..+++++
T Consensus 348 ~~~~~~~ 354 (393)
T d1sq9a_ 348 DSLAEPG 354 (393)
T ss_dssp CBCSSCC
T ss_pred CEEEECC
T ss_conf 9999831
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=1.7e-27 Score=211.40 Aligned_cols=305 Identities=10% Similarity=-0.036 Sum_probs=209.3
Q ss_pred EEECC-CCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEE
Q ss_conf 81059-99988998699991999799996898426894126664799999149998999721789777599996999838
Q 000316 1287 WFPTP-AASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1678)
Q Consensus 1287 ~~fSp-dg~~~~~~~LasgS~D~~v~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~ 1365 (1678)
..||| ||.+ +|+++. +.+.+|+.++.....+ +|.+.|.+++|+|||+.|++++.+ .+..|++||+.+++.
T Consensus 8 ~~fSP~dG~~-----~a~~~~-g~v~v~d~~~~~~~~~-~~~~~v~~~~~spDg~~l~~~~~~--~g~~v~v~d~~~~~~ 78 (360)
T d1k32a3 8 EDFSPLDGDL-----IAFVSR-GQAFIQDVSGTYVLKV-PEPLRIRYVRRGGDTKVAFIHGTR--EGDFLGIYDYRTGKA 78 (360)
T ss_dssp EEEEECGGGC-----EEEEET-TEEEEECTTSSBEEEC-SCCSCEEEEEECSSSEEEEEEEET--TEEEEEEEETTTCCE
T ss_pred CCCCCCCCCE-----EEEEEC-CEEEEEECCCCCEEEC-CCCCCEEEEEECCCCCEEEEEECC--CCCEEEEEECCCCCE
T ss_conf 5146889999-----999989-9699998999948991-699988889998999999999928--998999998999948
Q ss_pred EEEEECCCCCEEEEEECCCCCCEE--ECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 889713786477986539999178--279959999799994569960467665566899987533345544433457777
Q 000316 1366 VSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1443 (1678)
Q Consensus 1366 l~tl~gH~~~V~sI~fsp~~~~la--S~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s 1443 (1678)
. .+.+|...|.+++|+|++..++ +.|+.+++|+..+++....+..+..
T Consensus 79 ~-~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 128 (360)
T d1k32a3 79 E-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA----------------------------- 128 (360)
T ss_dssp E-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-----------------------------
T ss_pred E-EEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCC-----------------------------
T ss_conf 8-7508971277412114543210001111100000122210000001355-----------------------------
Q ss_pred CCEEEEEECCCCEEEEEEECCCCEEEEEE----------CCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCC
Q ss_conf 78378631598306767614997999997----------89919999888990358861799755678751078750897
Q 000316 1444 SGILSTAFDGNLYTCLHHIECVERLVVGI----------GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1513 (1678)
Q Consensus 1444 ~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs----------~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~ 1513 (1678)
.+.+++++|+++.++.+. .++.+++||+.+++...... +...+..++++
T Consensus 129 -----------~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~-------~~~~~~~~~~s--- 187 (360)
T d1k32a3 129 -----------MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT-------ENSHDYAPAFD--- 187 (360)
T ss_dssp -----------CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC-------SSSBEEEEEEC---
T ss_pred -----------CCCCHHHCCCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEECC-------CCCCCCCCCCC---
T ss_conf -----------202301213225665212331211000256542663045571353035-------43221100125---
Q ss_pred CCCCCCCCCCCCEEEEEECCCEEEEEECCCCC-------EEEEEECCCCCEEEEE-CCCCCEEEEEECCCC---EEEEEC
Q ss_conf 54458655799889999409929999689992-------9999931588769998-089999999959993---999986
Q 000316 1514 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-------VIASWRAHDGYVTKLA-APEDHLLVSSSLDKT---LRIWDL 1582 (1678)
Q Consensus 1514 ~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~-------~i~~l~gH~~~V~sIa-spdg~~LaSgS~Dgt---I~IWDl 1582 (1678)
++|+.|++++.++.+.+||..... ....+..|...+..+. ++++..++++..+.. .++|.+
T Consensus 188 --------pdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 259 (360)
T d1k32a3 188 --------ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPI 259 (360)
T ss_dssp --------TTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEEC
T ss_pred --------CCCCEEEEEECCCCEECCCCCCCCEEECCCCCEEEEECCCCCCCCCEECCCCCCCCCCCEEECCCCCCEEEC
T ss_conf --------779999999599855753335440232036411798524696012068777671553113652665400101
Q ss_pred CCCCCCCCEEEECCCCCEEE-----EEECCCEEEEEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEE
Q ss_conf 99998887695058998899-----975299999994897-599956778897896100031023430698765748999
Q 000316 1583 RRNWPSQPTVFKGHTNGISG-----FSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSI 1656 (1678)
Q Consensus 1583 ~~~~~~~~~~l~gH~~~V~a-----fSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~si 1656 (1678)
.... .....+..+.+.+.. +++++.++++++.++ +++|++.. + +.. .+.+.|.++
T Consensus 260 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~-----~-------~~~------~~~~~v~~~ 320 (360)
T d1k32a3 260 NVDP-GDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT-----R-------KVT------EVKNNLTDL 320 (360)
T ss_dssp SCCC-BCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTT-----C-------CEE------EEEEEEEEE
T ss_pred CCCC-CCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCC-----C-------EEE------EECCCCCEE
T ss_conf 2476-75267541389856999973599706999648998799997999-----7-------498------864886879
Q ss_pred EEECCCCEEEEEECCCCEEECC
Q ss_conf 9944998999994898399909
Q 000316 1657 SILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1657 afsPd~~lLatgs~DG~IrIwd 1678 (1678)
+|+||++.|++++.||+|++|+
T Consensus 321 ~~SpDG~~l~~~~~Dg~i~v~d 342 (360)
T d1k32a3 321 RLSADRKTVMVRKDDGKIYTFP 342 (360)
T ss_dssp EECTTSCEEEEEETTSCEEEEE
T ss_pred EECCCCCEEEEEECCCEEEEEE
T ss_conf 9999898999997899499999
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=3e-24 Score=187.74 Aligned_cols=305 Identities=11% Similarity=0.066 Sum_probs=192.0
Q ss_pred EEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEE-----ECCCC
Q ss_conf 9999199979999689-84268941266647999991499989997217897775999969998388897-----13786
Q 000316 1301 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY-----YGHEE 1374 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl-----~gH~~ 1374 (1678)
+++++.|++|++||.. ++++.++.+|. .+..++|||||+++++++. |++|++||+.+++..... .+|.+
T Consensus 35 ~V~~~~dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~----d~~v~vwd~~t~~~~~~~~i~~~~~~~~ 109 (426)
T d1hzua2 35 SVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGR----DARIDMIDLWAKEPTKVAEIKIGIEARS 109 (426)
T ss_dssp EEEETTTTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCEEEEEEECCSEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEECCC-CEEEEEECCCCCEEEEEEC----CCCEEEEECCCCCEEEEEEEECCCCCCC
T ss_conf 9997599979999999995999996899-8038999899999999958----9988999756886048999867888764
Q ss_pred CEEEEEECCCCCCE-EE--CCCCEEEEECCCCCEEEEECCCCCCCCCCC------------CCCCCCCCCCCCCC-CCCC
Q ss_conf 47798653999917-82--799599997999945699604676655668------------99987533345544-4334
Q 000316 1375 VVNDICVLSSSGRI-AS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGG------------SPSSSISKINTDQV-GMLN 1438 (1678)
Q Consensus 1375 ~V~sI~fsp~~~~l-aS--~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~------------s~s~~~~~~~~~~~-~~~~ 1438 (1678)
.+.+++|+|++.++ ++ .|+++++||..++.+...+..+........ +++........... ....
T Consensus 110 ~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~ 189 (426)
T d1hzua2 110 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 189 (426)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEE
T ss_conf 58850026889879996358976999857764125786226777364364278850389987878788885278976999
Q ss_pred CCCCCCC--EEEEEECCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCC
Q ss_conf 5777778--3786315983067676149979999978-991999988899035886179975567875107875089754
Q 000316 1439 SNTLSSG--ILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1678)
Q Consensus 1439 ~~~~s~~--i~sv~f~~~~vt~ia~sp~g~~Lvsgs~-DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~ 1515 (1678)
....... .....-.+.....+++++++++++++.. +..+.++|..+++.+..+..... ........+....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-- 263 (426)
T d1hzua2 190 VNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT----PHPGRGANFVHPK-- 263 (426)
T ss_dssp EECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSC----CCCSCCEEEEETT--
T ss_pred EEECCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCC----CCCCCEEEEECCC--
T ss_conf 9924665204577566775376137788867886420110000000255627887505874----4434201100698--
Q ss_pred CCCCCCCCCCEEEEEECCCEEEEEECCC-------CCEEEEEECCCCCEEEEE-CCCCCEEE-------EEECCCCEEEE
Q ss_conf 4586557998899994099299996899-------929999931588769998-08999999-------99599939999
Q 000316 1516 QAGGAVASPSWIAAGLSSGQCRLFDVRS-------GNVIASWRAHDGYVTKLA-APEDHLLV-------SSSLDKTLRIW 1580 (1678)
Q Consensus 1516 s~dg~~p~g~~LasGs~Dg~I~iWD~rt-------g~~i~~l~gH~~~V~sIa-spdg~~La-------SgS~DgtI~IW 1580 (1678)
.+ .-..++.+.|+.+.+|+... ++....+.+|...++.++ +|++++++ +++.|++|++|
T Consensus 264 --~~----~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vw 337 (426)
T d1hzua2 264 --YG----PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 337 (426)
T ss_dssp --TE----EEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEE
T ss_pred --CC----CEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEE
T ss_conf --77----457741578965988522566520330258689866887636787489986188850679880228879999
Q ss_pred ECCCCCCCCCEEE---------ECCCCCEE--EEEECCCEEE-EE----ECCC-EEEEECC
Q ss_conf 8699998887695---------05899889--9975299999-99----4897-5999567
Q 000316 1581 DLRRNWPSQPTVF---------KGHTNGIS--GFSVWGQDVI-SI----SNNK-IGLSSLS 1624 (1678)
Q Consensus 1581 Dl~~~~~~~~~~l---------~gH~~~V~--afSpdg~~La-Sg----s~D~-I~iwdl~ 1624 (1678)
|+.++. ...++ ..+...|. +|||||+.++ ++ +.++ |.+||..
T Consensus 338 d~~t~~--~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~ 396 (426)
T d1hzua2 338 DLKNLD--AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 396 (426)
T ss_dssp ETTCTT--SCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETT
T ss_pred ECCCCC--CCEEEECCCHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECC
T ss_conf 898787--67089502110256778851898799999999999972488889829999999
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.94 E-value=3.5e-24 Score=187.27 Aligned_cols=331 Identities=7% Similarity=-0.044 Sum_probs=189.6
Q ss_pred EEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEE--EE---EECCCC
Q ss_conf 9999199979999689-84268941266647999991499989997217897775999969998388--89---713786
Q 000316 1301 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV--SG---YYGHEE 1374 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l--~t---l~gH~~ 1374 (1678)
+++.+.|+++.+||.. ++++.++..| ..+..++|||||+++++++. |++|++||+.+++.. .. ..+|.+
T Consensus 35 ~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~----dg~v~~~d~~t~~~~~~~~i~~~~~~~~ 109 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR----DGKVNMIDLWMKEPTTVAEIKIGSEARS 109 (432)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEECC-CCEEEEEECCCCCEEEEECC----CCCEEEEEEECCCCEEEEEEECCCCCCC
T ss_conf 999769997999989998399997379-97137998899999999828----9997899810898128899844889877
Q ss_pred CEEEEEECCCCCCE-EEC--CCCEEEEECCCCCEEEEECCCCCCCCC------------CCCCCCCCCCCCCCC---CCC
Q ss_conf 47798653999917-827--995999979999456996046766556------------689998753334554---443
Q 000316 1375 VVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH------------GGSPSSSISKINTDQ---VGM 1436 (1678)
Q Consensus 1375 ~V~sI~fsp~~~~l-aS~--DgtIkIWD~~tg~~i~~l~~~~~~~~~------------~~s~s~~~~~~~~~~---~~~ 1436 (1678)
.+.+..|+|++.++ +++ |++|++||..+++++..+..+...... ..++++......... ...
T Consensus 110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~ 189 (432)
T d1qksa2 110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 189 (432)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 69843218888889998178982799907655422540247764352201688850589987899989999816882999
Q ss_pred CCCCCCC-CCEEEEEECCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCC
Q ss_conf 3457777-783786315983067676149979999978-99199998889903588617997556787510787508975
Q 000316 1437 LNSNTLS-SGILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1514 (1678)
Q Consensus 1437 ~~~~~~s-~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~-DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~ 1514 (1678)
....... ..+..+ -.+.....++++|+++++++++. ++.+.++|..+++.+..+....... +.........
T Consensus 190 ~d~~~~~~~~~~~i-~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~-~~~~~~~~~~----- 262 (432)
T d1qksa2 190 VDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP-HPGRGANFVH----- 262 (432)
T ss_dssp EETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB-CCTTCEEEEE-----
T ss_pred EECCCCCCCEEEEE-CCCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCC-CCCCCCCEEC-----
T ss_conf 98437875227998-3367542653889887999951666367776144526888721486224-5676641014-----
Q ss_pred CCCCCCCCCC-CEEEEEE-CCCEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCE
Q ss_conf 4458655799-8899994-099299996899929999931588769998-089999999959993999986999988876
Q 000316 1515 MQAGGAVASP-SWIAAGL-SSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1591 (1678)
Q Consensus 1515 ~s~dg~~p~g-~~LasGs-~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1591 (1678)
+.+ ...++.. .++.+.+|+..+.. ...|...+.... ++++..+++++.|.+.++|+........
T Consensus 263 -------~~~g~~~~~~~lg~~~v~~~~~~~~~----~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~-- 329 (432)
T d1qksa2 263 -------PTFGPVWATSHMGDDSVALIGTDPEG----HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEA-- 329 (432)
T ss_dssp -------TTTEEEEEEEBSSSSEEEEEECCTTT----CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSH--
T ss_pred -------CCCCCEECCCCCCCCEEEECCCCCCC----CCCCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCCCCCC--
T ss_conf -------89883102135688358762456655----54656577799886899768887268864102112678887--
Q ss_pred EEECCCCCEEEEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEE-
Q ss_conf 95058998899975299999994897-5999567788978961000310234306987657489999944998999994-
Q 000316 1592 VFKGHTNGISGFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGT- 1669 (1678)
Q Consensus 1592 ~l~gH~~~V~afSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs- 1669 (1678)
.....+ + .||++.+++++.|+ +++|++... ..+ .+|...+..++|+|||+.++++.
T Consensus 330 ---~~~~sv-~-vpDg~~la~~s~d~~~k~w~~~~~-----------~~l------~~~~~~v~~~~fS~DG~~v~~S~~ 387 (432)
T d1qksa2 330 ---EISGSV-A-VFDIKAMTGDGSDPEFKTLPIAEW-----------AGI------TEGQPRVVQGEFNKDGTEVWFSVW 387 (432)
T ss_dssp ---HHHTCE-E-EEEGGGCCCSSSCCCEEEECHHHH-----------HTC------CSSCCEEEEEEECTTSSEEEEEEE
T ss_pred ---CEEEEE-E-EEECHHHCCCCCCCCEEECCCCCC-----------CCC------CCCCCCEEEEEECCCCCEEEEEEE
T ss_conf ---703599-9-996246104556784486334344-----------445------789986897679899999999970
Q ss_pred ----CCCCEEECC
Q ss_conf ----898399909
Q 000316 1670 ----EDGYLRLCC 1678 (1678)
Q Consensus 1670 ----~DG~IrIwd 1678 (1678)
.||.|+|||
T Consensus 388 ~~~~~~g~i~i~D 400 (432)
T d1qksa2 388 NGKDQESALVVVD 400 (432)
T ss_dssp CCTTSCCEEEEEE
T ss_pred CCCCCCCCEEEEE
T ss_conf 4888888689999
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.92 E-value=1.8e-22 Score=174.72 Aligned_cols=280 Identities=11% Similarity=-0.014 Sum_probs=196.8
Q ss_pred CCCCCCEEE--ECCCCCCCCCCEEEEEECCC--CEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEE
Q ss_conf 678991681--05999988998699991999--79999689842689412666479999914999899972178977759
Q 000316 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLK--DESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1678)
Q Consensus 1280 ~gH~~~V~~--fSpdg~~~~~~~LasgS~D~--~v~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtV 1355 (1678)
.+|.+.|.+ |||||++ |++++.+. .+++|+.++..+..+.+|.+.|.+++|+||++++++++. |+.+
T Consensus 39 ~~~~~~v~~~~~spDg~~-----l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~----~~~~ 109 (360)
T d1k32a3 39 VPEPLRIRYVRRGGDTKV-----AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND----RFEI 109 (360)
T ss_dssp CSCCSCEEEEEECSSSEE-----EEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET----TSEE
T ss_pred CCCCCCEEEEEECCCCCE-----EEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCEECC----CCCC
T ss_conf 169998888999899999-----9999928998999998999948875089712774121145432100011----1110
Q ss_pred EEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEE------------CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 99969998388897137864779865399991782------------799599997999945699604676655668999
Q 000316 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS------------CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPS 1423 (1678)
Q Consensus 1356 rIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS------------~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s 1423 (1678)
++|++.++++...+..|...+.+++|+|++..++. .++.+++||..+++.......
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~------------ 177 (360)
T d1k32a3 110 MTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE------------ 177 (360)
T ss_dssp EEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS------------
T ss_pred CCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEECCC------------
T ss_conf 00001222100000013552023012132256652123312110002565426630455713530354------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCC
Q ss_conf 87533345544433457777783786315983067676149979999978991999988899035886179975567875
Q 000316 1424 SSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSL 1503 (1678)
Q Consensus 1424 ~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~ 1503 (1678)
........++++++.+++++.|+.+++||......... . ...
T Consensus 178 -----------------------------~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~--~-------~~~ 219 (360)
T d1k32a3 178 -----------------------------NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE--V-------VSK 219 (360)
T ss_dssp -----------------------------SSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECC--S-------CBE
T ss_pred -----------------------------CCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEEC--C-------CCC
T ss_conf -----------------------------32211001257799999995998557533354402320--3-------641
Q ss_pred CEEEEEECCCCCCCCCCCCCCCEEEEEECC-----CEEEEEECCCCCEEEEEECCCCCEEEEE-CCCC---CEEEEEECC
Q ss_conf 107875089754458655799889999409-----9299996899929999931588769998-0899---999999599
Q 000316 1504 VSAICACGSEKMQAGGAVASPSWIAAGLSS-----GQCRLFDVRSGNVIASWRAHDGYVTKLA-APED---HLLVSSSLD 1574 (1678)
Q Consensus 1504 V~~ia~~~~~~~s~dg~~p~g~~LasGs~D-----g~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg---~~LaSgS~D 1574 (1678)
+..+++... ...+..+++++..++++..+ ..+..++...+.. ..+..+.+.+..+. ...+ .++++++.+
T Consensus 220 ~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (360)
T d1k32a3 220 PFVIPLIPG-SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDY-RMIIPLESSILIYSVPVHGEFAAYYQGAPEK 297 (360)
T ss_dssp EEEEESSTT-CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCE-EEEEECSSEEEEEECCCCCSHHHHHHCCCCC
T ss_pred EEEEECCCC-CCCCCEECCCCCCCCCCCEEECCCCCCEEECCCCCCCE-EEEEECCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 179852469-60120687776715531136526654001012476752-6754138985699997359970699964899
Q ss_pred CCEEEEECCCCCCCCCEEEECCCCCEE--EEEECCCEEEEEECCC-EEEEECCCC
Q ss_conf 939999869999888769505899889--9975299999994897-599956778
Q 000316 1575 KTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLSKS 1626 (1678)
Q Consensus 1575 gtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~iwdl~~~ 1626 (1678)
+.+++||+.+++ ...+ .+.|. +|||||+.|++++.|+ |++|++...
T Consensus 298 ~~i~~~d~~~~~---~~~~---~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~ 346 (360)
T d1k32a3 298 GVLLKYDVKTRK---VTEV---KNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 346 (360)
T ss_dssp EEEEEEETTTCC---EEEE---EEEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred CEEEEEECCCCE---EEEE---CCCCCEEEECCCCCEEEEEECCCEEEEEECCCC
T ss_conf 879999799974---9886---488687999998989999978994999999999
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=1.7e-20 Score=160.33 Aligned_cols=293 Identities=9% Similarity=-0.050 Sum_probs=136.8
Q ss_pred EEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE--EECCCCEEEEECCCCCEEEEECCCCCCCCC
Q ss_conf 899972178977759999699983888971378647798653999917--827995999979999456996046766556
Q 000316 1341 TVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI--ASCDGTLHVWNSQTGKLLSVFAEQSMDSLH 1418 (1678)
Q Consensus 1341 ~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l--aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~ 1418 (1678)
.+++++. |++|++||+.+++.+.++.+|. .+.+++|+|++.++ ++.|++|++||+.+++...........
T Consensus 34 ~~V~~~~----dg~v~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~--- 105 (426)
T d1hzua2 34 FSVTLRD----AGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGI--- 105 (426)
T ss_dssp EEEEETT----TTEEEEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCS---
T ss_pred EEEEECC----CCEEEEEECCCCCEEEEEECCC-CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCC---
T ss_conf 9999759----9979999999995999996899-8038999899999999958998899975688604899986788---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE-EEECCCCEEEEECCCCEEEEEEECCCCC
Q ss_conf 689998753334554443345777778378631598306767614997999-9978991999988899035886179975
Q 000316 1419 GGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV-VGIGNGSLRFIDINQGQKLHLWRGEPTE 1497 (1678)
Q Consensus 1419 ~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lv-sgs~DgtIkiWDl~tg~~i~~l~~~~~~ 1497 (1678)
.+.+ .+...+++|+|++++ ++..++++++||..++.++..+..+...
T Consensus 106 ----------------------~~~~----------~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~ 153 (426)
T d1hzua2 106 ----------------------EARS----------VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT 153 (426)
T ss_dssp ----------------------EEEE----------EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEEC
T ss_pred ----------------------CCCC----------EEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCC
T ss_conf ----------------------8764----------58850026889879996358976999857764125786226777
Q ss_pred C-----CCCCCCEEEEEECCC---------------------------------CCCCCCCCCCCCEEEEEE-CCCEEEE
Q ss_conf 5-----678751078750897---------------------------------544586557998899994-0992999
Q 000316 1498 L-----GFPSLVSAICACGSE---------------------------------KMQAGGAVASPSWIAAGL-SSGQCRL 1538 (1678)
Q Consensus 1498 v-----~~~~~V~~ia~~~~~---------------------------------~~s~dg~~p~g~~LasGs-~Dg~I~i 1538 (1678)
+ ........++.++.. ........+++++++++. .+..+.+
T Consensus 154 ~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~ 233 (426)
T d1hzua2 154 VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAV 233 (426)
T ss_dssp SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEE
T ss_pred CCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEECCCCEEE
T ss_conf 36436427885038998787878888527897699999246652045775667753761377888678864201100000
Q ss_pred EECCCCCEEEEEECCCC--CEEEEE--CCCCC--EEEEEECCCCEEEEECCCCC-----CCCCEEEECCCCCEE--EEEE
Q ss_conf 96899929999931588--769998--08999--99999599939999869999-----888769505899889--9975
Q 000316 1539 FDVRSGNVIASWRAHDG--YVTKLA--APEDH--LLVSSSLDKTLRIWDLRRNW-----PSQPTVFKGHTNGIS--GFSV 1605 (1678)
Q Consensus 1539 WD~rtg~~i~~l~gH~~--~V~sIa--spdg~--~LaSgS~DgtI~IWDl~~~~-----~~~~~~l~gH~~~V~--afSp 1605 (1678)
+|..+++.+..+..... ...... .+... ..++.+.|+.+.+|+..... .+....+.+|...+. +|+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sP 313 (426)
T d1hzua2 234 IDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP 313 (426)
T ss_dssp EETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCT
T ss_pred EECCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCC
T ss_conf 00255627887505874443420110069877457741578965988522566520330258689866887636787489
Q ss_pred CCCEEEE-------EECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEE-----ECCC
Q ss_conf 2999999-------94897-599956778897896100031023430698765748999994499899999-----4898
Q 000316 1606 WGQDVIS-------ISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVG-----TEDG 1672 (1678)
Q Consensus 1606 dg~~LaS-------gs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatg-----s~DG 1672 (1678)
+++.+++ ++.|+ |++||+... .................+...+..++|+|||+.++++ +.||
T Consensus 314 dg~~l~v~~~~~~s~~~~~tv~vwd~~t~-----~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~ 388 (426)
T d1hzua2 314 KSSHLYVDTTFNPDARISQSVAVFDLKNL-----DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSS 388 (426)
T ss_dssp TCSEEEECCTTCSSHHHHTCEEEEETTCT-----TSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCC
T ss_pred CCCEEEEEECCCCCCCCCCEEEEEECCCC-----CCCEEEECCCHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC
T ss_conf 98618885067988022887999989878-----7670895021102567788518987999999999999724888898
Q ss_pred CEEECC
Q ss_conf 399909
Q 000316 1673 YLRLCC 1678 (1678)
Q Consensus 1673 ~IrIwd 1678 (1678)
.|+|||
T Consensus 389 ~i~v~D 394 (426)
T d1hzua2 389 ALVVVD 394 (426)
T ss_dssp EEEEEE
T ss_pred EEEEEE
T ss_conf 299999
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.90 E-value=1.4e-18 Score=146.30 Aligned_cols=257 Identities=11% Similarity=0.095 Sum_probs=190.7
Q ss_pred EEEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEE
Q ss_conf 9999199979999689-842689412666479999914999899972178977759999699983888971378647798
Q 000316 1301 LGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDI 1379 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI 1379 (1678)
.++++.|++|.+||.+ ++.++++... +.+..++|+|||++++.++. .|++|++||+.+++.+.++..|.. +..+
T Consensus 5 yV~~~~~~~v~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~---~~~~i~v~d~~t~~~~~~~~~~~~-~~~~ 79 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANA---HSNDVSIIDTATNNVIATVPAGSS-PQGV 79 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEG---GGTEEEEEETTTTEEEEEEECSSS-EEEE
T ss_pred EEEECCCCEEEEEECCCCEEEEEEECC-CCCEEEEEECCCCEEEEEEC---CCCEEEEEECCCCCEEEEEECCCC-CCCC
T ss_conf 999789998999999999599999889-98369999289899999978---999899999998941032000246-4311
Q ss_pred EECCCCCCE-EE--CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE
Q ss_conf 653999917-82--799599997999945699604676655668999875333455444334577777837863159830
Q 000316 1380 CVLSSSGRI-AS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1678)
Q Consensus 1380 ~fsp~~~~l-aS--~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~v 1456 (1678)
+|++++..+ ++ .++.+.+|+..+++....+..+. ..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~ 118 (301)
T d1l0qa2 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-----------------------------------------SP 118 (301)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-----------------------------------------SE
T ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCC-----------------------------------------CC
T ss_conf 0001111111111111001100124302432024444-----------------------------------------42
Q ss_pred EEEEEECCCCEEE-EEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEE-CCC
Q ss_conf 6767614997999-99789919999888990358861799755678751078750897544586557998899994-099
Q 000316 1457 TCLHHIECVERLV-VGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL-SSG 1534 (1678)
Q Consensus 1457 t~ia~sp~g~~Lv-sgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs-~Dg 1534 (1678)
.++.+++++..++ ++..++.+.+|+..++..+..+.... .+.++++. +++..++++. .++
T Consensus 119 ~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----------~~~~~~~~~~~~~~ 180 (301)
T d1l0qa2 119 LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR-------SPKGIAVT-----------PDGTKVYVANFDSM 180 (301)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-------SEEEEEEC-----------TTSSEEEEEETTTT
T ss_pred EEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEECCCCC-------CCEEEEEE-----------CCCCCEEEECCCCC
T ss_conf 3787605897155420111100110001463035315678-------84288860-----------46540131012111
Q ss_pred EEEEEECCCCCEEEEEECCCCCEEEEE-CCCCCEEEEEE---CCCCEEEEECCCCCCCCCEEEECCCCCEE-EEEECCCE
Q ss_conf 299996899929999931588769998-08999999995---99939999869999888769505899889-99752999
Q 000316 1535 QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSS---LDKTLRIWDLRRNWPSQPTVFKGHTNGIS-GFSVWGQD 1609 (1678)
Q Consensus 1535 ~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~LaSgS---~DgtI~IWDl~~~~~~~~~~l~gH~~~V~-afSpdg~~ 1609 (1678)
.+.+|+....+.......+ .....++ ++++..++.++ .+++|++||+.++ +....+..+..+.. +|+|||++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~--~~~~~~~~~~~~~~va~spdg~~ 257 (301)
T d1l0qa2 181 SISVIDTVTNSVIDTVKVE-AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN--KITARIPVGPDPAGIAVTPDGKK 257 (301)
T ss_dssp EEEEEETTTTEEEEEEECS-SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT--EEEEEEECCSSEEEEEECTTSSE
T ss_pred CCCCCCCCCEEEEECCCCC-CCCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCC--EEEEEECCCCCEEEEEEECCCCE
T ss_conf 1111111100011101335-77503110111101111002100002323656998--19999848998779999189899
Q ss_pred E-EEEECCC-EEEEECC
Q ss_conf 9-9994897-5999567
Q 000316 1610 V-ISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1610 L-aSgs~D~-I~iwdl~ 1624 (1678)
| ++++.|+ |.+||+.
T Consensus 258 l~va~~~~~~i~v~D~~ 274 (301)
T d1l0qa2 258 VYVALSFCNTVSVIDTA 274 (301)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEECCCCEEEEEECC
T ss_conf 99998999969999999
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.87 E-value=1.3e-17 Score=139.46 Aligned_cols=228 Identities=14% Similarity=0.108 Sum_probs=100.8
Q ss_pred EECCCCCCCCCCEE-EEEECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEE
Q ss_conf 10599998899869-999199979999689-8426894126664799999149998999721789777599996999838
Q 000316 1288 FPTPAASWDGPDFL-GRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~L-asgS~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~ 1365 (1678)
+|||||.+ + ++++.++.+++||+. +..+.++..|.. +..++|++++..++.++.+ ++.+.+|+..+++.
T Consensus 38 a~spdG~~-----l~v~~~~~~~i~v~d~~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 108 (301)
T d1l0qa2 38 VISPDGTK-----VYVANAHSNDVSIIDTATNNVIATVPAGSS-PQGVAVSPDGKQVYVTNMA---SSTLSVIDTTSNTV 108 (301)
T ss_dssp EECTTSSE-----EEEEEGGGTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEETT---TTEEEEEETTTTEE
T ss_pred EEECCCCE-----EEEEECCCCEEEEEECCCCCEEEEEECCCC-CCCCCCCCCCCCCCCCCCC---CCEEEECCCCCCEE
T ss_conf 99289899-----999978999899999998941032000246-4311000111111111111---10011001243024
Q ss_pred EEEEECCCCCEEEEEECCCCCCE-EE--CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88971378647798653999917-82--7995999979999456996046766556689998753334554443345777
Q 000316 1366 VSGYYGHEEVVNDICVLSSSGRI-AS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTL 1442 (1678)
Q Consensus 1366 l~tl~gH~~~V~sI~fsp~~~~l-aS--~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~ 1442 (1678)
...+..+ ..+.+++|++++..+ .+ .|+++.+|+..++.....+..+.
T Consensus 109 ~~~~~~~-~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 158 (301)
T d1l0qa2 109 AGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR----------------------------- 158 (301)
T ss_dssp EEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS-----------------------------
T ss_pred EEECCCC-CCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEECCCCC-----------------------------
T ss_conf 3202444-4423787605897155420111100110001463035315678-----------------------------
Q ss_pred CCCEEEEEECCCCEEEEEEECCCCEEEEEECC-CCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 77837863159830676761499799999789-91999988899035886179975567875107875089754458655
Q 000316 1443 SSGILSTAFDGNLYTCLHHIECVERLVVGIGN-GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV 1521 (1678)
Q Consensus 1443 s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D-gtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~ 1521 (1678)
...++++++++..++++..+ +.+.+|+....+......... ....+++.
T Consensus 159 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~----------- 208 (301)
T d1l0qa2 159 ------------SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-------APSGIAVN----------- 208 (301)
T ss_dssp ------------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-------EEEEEEEC-----------
T ss_pred ------------CCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCC-------CCCEEECC-----------
T ss_conf ------------842888604654013101211111111111000111013357-------75031101-----------
Q ss_pred CCCCEEEEEEC---CCEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCCEE-EEEECCCCEEEEECCCC
Q ss_conf 79988999940---99299996899929999931588769998-0899999-99959993999986999
Q 000316 1522 ASPSWIAAGLS---SGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLL-VSSSLDKTLRIWDLRRN 1585 (1678)
Q Consensus 1522 p~g~~LasGs~---Dg~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~L-aSgS~DgtI~IWDl~~~ 1585 (1678)
++++.++.+.. ++.|++||..+++.+..+..+ ..+++++ +|+|++| ++++.|++|++||+.++
T Consensus 209 ~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~ 276 (301)
T d1l0qa2 209 PEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276 (301)
T ss_dssp TTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECCC-CCEEEEEEECCCCEEEEEECCCCEEEEEECCCC
T ss_conf 11101111002100002323656998199998489-987799991898999999899996999999999
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.86 E-value=1.1e-18 Score=147.07 Aligned_cols=275 Identities=11% Similarity=-0.007 Sum_probs=187.9
Q ss_pred CEEEEEECCCCEEEEECC-CCEEEEECC--CCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCC--
Q ss_conf 869999199979999689-842689412--666479999914999899972178977759999699983888971378--
Q 000316 1299 DFLGRVGGLKDESPWKIK-ASILSSIRA--HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHE-- 1373 (1678)
Q Consensus 1299 ~~LasgS~D~~v~lWd~~-g~~l~tl~g--H~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~-- 1373 (1678)
+++++++.|+++.+||.+ +.++.++.. +...+.+++|+|||++++.++. .|+.|.+||+.+++.+..+..+.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~---~~~~v~v~D~~t~~~~~~~~~~~~~ 78 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN---KSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET---TTTEEEEEETTTCCEEEEEECCBTT
T ss_pred EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEEC---CCCEEEEEECCCCCEEEEEECCCCC
T ss_conf 6999976799899999999949999987788998237999999899999978---9994999999999298887247773
Q ss_pred ---CCEEEEEECCCCCCEE--E------------CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ---6477986539999178--2------------7995999979999456996046766556689998753334554443
Q 000316 1374 ---EVVNDICVLSSSGRIA--S------------CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1436 (1678)
Q Consensus 1374 ---~~V~sI~fsp~~~~la--S------------~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~ 1436 (1678)
..+..++|++++..++ + .+..+.+||..+++....+....
T Consensus 79 ~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~----------------------- 135 (337)
T d1pbyb_ 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR----------------------- 135 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS-----------------------
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEEECCCCC-----------------------
T ss_conf 125402548986877579995047762034203455521203566775988414568-----------------------
Q ss_pred CCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 34577777837863159830676761499799999789919999888990358861799755678751078750897544
Q 000316 1437 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQ 1516 (1678)
Q Consensus 1437 ~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s 1516 (1678)
....++++++++.+++++. .+.+||..+++....+..+..............+.......
T Consensus 136 ------------------~~~~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (337)
T d1pbyb_ 136 ------------------QITMLAWARDGSKLYGLGR--DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195 (337)
T ss_dssp ------------------SCCCEEECTTSSCEEEESS--SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTT
T ss_pred ------------------CCEEEEECCCCCEEEEECC--CCCEEEEECCCEEEEEECCCCCCCCEECCCCCEEECCCCCC
T ss_conf ------------------7218998688888999717--75056630372788861477543311357763140146653
Q ss_pred CCC------CCCCCCEEEEEECCCEEEEEECCCCCEEEE-EECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCC
Q ss_conf 586------557998899994099299996899929999-931588769998-089999999959993999986999988
Q 000316 1517 AGG------AVASPSWIAAGLSSGQCRLFDVRSGNVIAS-WRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPS 1588 (1678)
Q Consensus 1517 ~dg------~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~-l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~ 1588 (1678)
... ...+......+..++.+.+||..++..... +..+...+..+. ++++..++.+ ++.|++||+.++ +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~--~ 271 (337)
T d1pbyb_ 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--A 271 (337)
T ss_dssp TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--E
T ss_pred CEEEEEEEEEEECCCEEEECCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEC--CCCEEEEECCCC--C
T ss_conf 124663244410366045403676179998688858889832887505888742661399973--552899989889--6
Q ss_pred CCEEEECCCCCEE--EEEECCCEEEEEECCC-EEEEECC
Q ss_conf 8769505899889--9975299999994897-5999567
Q 000316 1589 QPTVFKGHTNGIS--GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1589 ~~~~l~gH~~~V~--afSpdg~~LaSgs~D~-I~iwdl~ 1624 (1678)
.+..+.. ...+. +|+|||+.|++++.|+ |++||..
T Consensus 272 ~~~~~~~-~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~ 309 (337)
T d1pbyb_ 272 SIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp EEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred EEEEECC-CCCEEEEEECCCCCEEEEEECCCCEEEEECC
T ss_conf 9999748-9988999997899999999499929999999
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.86 E-value=1.9e-19 Score=152.78 Aligned_cols=278 Identities=9% Similarity=-0.021 Sum_probs=182.5
Q ss_pred EECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEEC-CCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEE
Q ss_conf 10599998899869999199979999689-84268941-26664799999149998999721789777599996999838
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIR-AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~-gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~ 1365 (1678)
+|++++.+ +++++.|+++.+||++ ++++++++ .|...+.+++|+|||++++.++. .|+.|.+||+.+++.
T Consensus 3 a~~~~~~~-----l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~---~~~~v~~~d~~t~~~ 74 (346)
T d1jmxb_ 3 ALKAGHEY-----MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN---HYGDIYGIDLDTCKN 74 (346)
T ss_dssp CCCTTCEE-----EEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET---TTTEEEEEETTTTEE
T ss_pred CCCCCCCE-----EEEECCCCEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEEC---CCCCEEEEECCCCEE
T ss_conf 58899969-----9998699979999999998999999489997045999789899999978---999399996756713
Q ss_pred EEEEECCC------CCEEEEEECCCCCCE-EE-------------CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 88971378------647798653999917-82-------------79959999799994569960467665566899987
Q 000316 1366 VSGYYGHE------EVVNDICVLSSSGRI-AS-------------CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1425 (1678)
Q Consensus 1366 l~tl~gH~------~~V~sI~fsp~~~~l-aS-------------~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~ 1425 (1678)
+..+.... ..+..++|++++.++ ++ .+..+.+||..+++....+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------- 140 (346)
T d1jmxb_ 75 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT-------------- 140 (346)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE--------------
T ss_pred EEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEEE--------------
T ss_conf 123103654345477417999905888899970577521565146762489985256326568873--------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCE
Q ss_conf 53334554443345777778378631598306767614997999997899199998889903588617997556787510
Q 000316 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1505 (1678)
Q Consensus 1426 ~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~ 1505 (1678)
...+.....+..++++..+++ ++.+.+||..+++.+..+..+....
T Consensus 141 ------------------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~------- 186 (346)
T d1jmxb_ 141 ------------------------FPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTVALPLRNWNR------- 186 (346)
T ss_dssp ------------------------EECCSSCCCEEECTTSCEEEE---SSSEEEECTTTCCEEEEECSTTCCC-------
T ss_pred ------------------------EECCCCEEEEEECCCCEEEEE---CCCCEEEECCCCCEEEEEECCCCCC-------
T ss_conf ------------------------102474399995278789984---7962699806997899996489866-------
Q ss_pred EEEEECCCCCCC---------------CCCCCCCCEEEEEECCCEEEEEECCCCCEEE-EEECCCCCEEEEE-CCCCCEE
Q ss_conf 787508975445---------------8655799889999409929999689992999-9931588769998-0899999
Q 000316 1506 AICACGSEKMQA---------------GGAVASPSWIAAGLSSGQCRLFDVRSGNVIA-SWRAHDGYVTKLA-APEDHLL 1568 (1678)
Q Consensus 1506 ~ia~~~~~~~s~---------------dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~-~l~gH~~~V~sIa-spdg~~L 1568 (1678)
.+++++...... .........++++..++.+.+||..++.... .+..|...+..+. ++++..+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (346)
T d1jmxb_ 187 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQ 266 (346)
T ss_dssp TTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTE
T ss_pred CEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCEE
T ss_conf 23771255289998649981676512311126732575404783499997778836878763156606888971799789
Q ss_pred EEEECCCCEEEEECCCCCCCCCEEEE-CCCCCEEEEEECCCEEEEEECCC-EEEEECC
Q ss_conf 99959993999986999988876950-58998899975299999994897-5999567
Q 000316 1569 VSSSLDKTLRIWDLRRNWPSQPTVFK-GHTNGISGFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1569 aSgS~DgtI~IWDl~~~~~~~~~~l~-gH~~~V~afSpdg~~LaSgs~D~-I~iwdl~ 1624 (1678)
++++ ++.|.+||..++ +.+..+. ++.-.-.+|+|||+.+++++.|+ |++||..
T Consensus 267 ~~~~-~~~v~v~d~~~~--~~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~ 321 (346)
T d1jmxb_ 267 IYGV-LNRLAKYDLKQR--KLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321 (346)
T ss_dssp EEEE-ESEEEEEETTTT--EEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETT
T ss_pred EEEC-CCEEEEEECCCC--CEEEEECCCCCEEEEEECCCCCEEEEEECCCCEEEEECC
T ss_conf 9942-983899989999--399997499977899996899999999489929999996
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.85 E-value=3.5e-19 Score=150.76 Aligned_cols=296 Identities=8% Similarity=-0.062 Sum_probs=181.7
Q ss_pred EECCCCCCCCCCEEEEEECCCCEEEEECC-CC--E---EEEECCCCCCEEEEEEECCCCEE-EEEECCCCCCCEEEEEEC
Q ss_conf 10599998899869999199979999689-84--2---68941266647999991499989-997217897775999969
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIK-AS--I---LSSIRAHHGALRSVAVGQDECTV-FTAGIGPGFKGTVQKWEL 1360 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~--~---l~tl~gH~~~V~svafspdg~~L-aSgs~d~~~DgtVrIWDl 1360 (1678)
+|||||++ +++++.|+.+++||+. +. . +....+|.+.+.+.+|+|||+++ ++++. |++|++||.
T Consensus 68 ~fSpDG~~-----l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~----~~~v~i~d~ 138 (432)
T d1qksa2 68 RLSASGRY-----LFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW----PPQYVIMDG 138 (432)
T ss_dssp EECTTSCE-----EEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE----TTEEEEEET
T ss_pred EECCCCCE-----EEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCCEEEEECCC----CCEEEEEEC
T ss_conf 98899999-----999828999789981089812889984488987769843218888889998178----982799907
Q ss_pred CCCEEEEEEECCC-----------CCEEEEEECCCCCCE-EE--CCCCEEEEECCCCCEEEEECCC--CCCCCCCCCCCC
Q ss_conf 9983888971378-----------647798653999917-82--7995999979999456996046--766556689998
Q 000316 1361 TRINCVSGYYGHE-----------EVVNDICVLSSSGRI-AS--CDGTLHVWNSQTGKLLSVFAEQ--SMDSLHGGSPSS 1424 (1678)
Q Consensus 1361 ~tg~~l~tl~gH~-----------~~V~sI~fsp~~~~l-aS--~DgtIkIWD~~tg~~i~~l~~~--~~~~~~~~s~s~ 1424 (1678)
++++++..+.+|. .....+.+++++..+ ++ .+++|.+||..+++.......+ ........+|++
T Consensus 139 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg 218 (432)
T d1qksa2 139 ETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSH 218 (432)
T ss_dssp TTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTS
T ss_pred CCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCEECCCC
T ss_conf 65542254024776435220168885058998789998999981688299998437875227998336754265388988
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCEEEEEE------CCCCEEEEEEECCCCEEEEEE-CCCCEEEEECCCCEEEEEEECCCC
Q ss_conf 7533345544433-45777778378631------598306767614997999997-899199998889903588617997
Q 000316 1425 SISKINTDQVGML-NSNTLSSGILSTAF------DGNLYTCLHHIECVERLVVGI-GNGSLRFIDINQGQKLHLWRGEPT 1496 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~-~~~~~s~~i~sv~f------~~~~vt~ia~sp~g~~Lvsgs-~DgtIkiWDl~tg~~i~~l~~~~~ 1496 (1678)
............. ........+....- +............+....+.. .++++.+|+...... .
T Consensus 219 ~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~----~---- 290 (432)
T d1qksa2 219 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGH----P---- 290 (432)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC----T----
T ss_pred CEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECCCCCCEECCCCCCCCEEEECCCCCCCC----C----
T ss_conf 79999516663677761445268887214862245676641014898831021356883587624566555----4----
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCC
Q ss_conf 55678751078750897544586557998899994099299996899929999931588769998089999999959993
Q 000316 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKT 1576 (1678)
Q Consensus 1497 ~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIaspdg~~LaSgS~Dgt 1576 (1678)
.+...+....+. +++..+++++.+...++|+..+.. .|.....+++.||++.+++++.|++
T Consensus 291 --~~~~~v~~~~~~-----------~~g~~~~~~s~p~~~~lw~~~~~~------~~~~~~~sv~vpDg~~la~~s~d~~ 351 (432)
T d1qksa2 291 --DNAWKILDSFPA-----------LGGGSLFIKTHPNSQYLYVDATLN------PEAEISGSVAVFDIKAMTGDGSDPE 351 (432)
T ss_dssp --TTBTSEEEEEEC-----------SCSCCCCEECCTTCSEEEEECTTC------SSHHHHTCEEEEEGGGCCCSSSCCC
T ss_pred --CCCCEEEEEEEC-----------CCCCEEEEEECCCCCCEEECCCCC------CCCCEEEEEEEEECHHHCCCCCCCC
T ss_conf --656577799886-----------899768887268864102112678------8877035999996246104556784
Q ss_pred EEEEECCCCCCCCCEEEECCCCCEE--EEEECCCEEEEEE-----CCC-EEEEECC
Q ss_conf 9999869999888769505899889--9975299999994-----897-5999567
Q 000316 1577 LRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISIS-----NNK-IGLSSLS 1624 (1678)
Q Consensus 1577 I~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs-----~D~-I~iwdl~ 1624 (1678)
+++|++.++ . .+..|...|. +|||||+.++.+. .++ |.+||..
T Consensus 352 ~k~w~~~~~--~---~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~ 402 (432)
T d1qksa2 352 FKTLPIAEW--A---GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 402 (432)
T ss_dssp EEEECHHHH--H---TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred EEECCCCCC--C---CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEECC
T ss_conf 486334344--4---45789986897679899999999970488888868999999
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.84 E-value=7.8e-18 Score=140.98 Aligned_cols=265 Identities=11% Similarity=0.055 Sum_probs=161.2
Q ss_pred EEECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEECCCCC-----CEEEEEEECCCCEEEEEECCC--------CCC
Q ss_conf 810599998899869999199979999689-842689412666-----479999914999899972178--------977
Q 000316 1287 WFPTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHG-----ALRSVAVGQDECTVFTAGIGP--------GFK 1352 (1678)
Q Consensus 1287 ~~fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~gH~~-----~V~svafspdg~~LaSgs~d~--------~~D 1352 (1678)
-+|||||++ ++++++.++.+.+||+. ++.+..+..+.. .+..++|+||++.+++++.+. ..+
T Consensus 39 i~~spDg~~----l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T d1pbyb_ 39 PMVAPGGRI----AYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp EEECTTSSE----EEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred EEECCCCCE----EEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCC
T ss_conf 999999899----9999789994999999999298887247773125402548986877579995047762034203455
Q ss_pred CEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75999969998388897137864779865399991782799599997999945699604676655668999875333455
Q 000316 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1678)
Q Consensus 1353 gtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~ 1432 (1678)
..+.+||..+++....+.. ...+.+++|++++..+.+.++.+.+||..+++....+..+.........+.....
T Consensus 115 ~~~~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 188 (337)
T d1pbyb_ 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV----- 188 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCC-----
T ss_pred CCEEECCCCCCEEEEECCC-CCCCEEEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCEECCCCCEE-----
T ss_conf 5212035667759884145-6872189986888889997177505663037278886147754331135776314-----
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECC
Q ss_conf 44433457777783786315983067676149979999978991999988899035886179975567875107875089
Q 000316 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1678)
Q Consensus 1433 ~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~ 1512 (1678)
..... ........ ......+......++.++.+.+||..++......... +...+...++.
T Consensus 189 ----~~~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-- 249 (337)
T d1pbyb_ 189 ----WNQHE-SSGVMATP-------FYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI-----MDVFYFSTAVN-- 249 (337)
T ss_dssp ----CCCCT-TTTEEEEE-------EEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE-----CSSCEEEEEEC--
T ss_pred ----ECCCC-CCCEEEEE-------EEEEEECCCEEEECCCCCCEEEEECCCCCEEEEEECC-----CCCCEEEEEEC--
T ss_conf ----01466-53124663-------2444103660454036761799986888588898328-----87505888742--
Q ss_pred CCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCE
Q ss_conf 7544586557998899994099299996899929999931588769998-089999999959993999986999988876
Q 000316 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPT 1591 (1678)
Q Consensus 1513 ~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~ 1591 (1678)
+++..++.+ ++.+++||+.+++.+..+. +...+.+++ +|+|++|++++.|++|++||..+. +.+.
T Consensus 250 ---------~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~--~~v~ 315 (337)
T d1pbyb_ 250 ---------PAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL--EKKG 315 (337)
T ss_dssp ---------TTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC--CEEE
T ss_pred ---------CCCEEEEEC--CCCEEEEECCCCCEEEEEC-CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCC--CEEE
T ss_conf ---------661399973--5528999898896999974-8998899999789999999949992999999987--6989
Q ss_pred EEE
Q ss_conf 950
Q 000316 1592 VFK 1594 (1678)
Q Consensus 1592 ~l~ 1594 (1678)
+++
T Consensus 316 ~i~ 318 (337)
T d1pbyb_ 316 QVD 318 (337)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 998
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.84 E-value=1e-15 Score=125.56 Aligned_cols=271 Identities=10% Similarity=-0.006 Sum_probs=166.3
Q ss_pred EECCCCCCCCCCEEEEE-----ECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECCC------CCCCEE
Q ss_conf 10599998899869999-----199979999689-842689412666479999914999899972178------977759
Q 000316 1288 FPTPAASWDGPDFLGRV-----GGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGP------GFKGTV 1355 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~Lasg-----S~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~------~~DgtV 1355 (1678)
++||||.. ++.. +.+.++.+||.. ++.+.++.++... .++|+|||+++++++.+. ..|+.|
T Consensus 27 a~spdg~~-----~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v 99 (373)
T d2madh_ 27 APGADGRR-----SYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred CCCCCCCE-----EEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEEECCCCCCCCCCCEEE
T ss_conf 01899978-----99973422578765999989999799999579886--079868999899996057753212453189
Q ss_pred EEEECCCCEEEEEEECCCCCEEEE-------EECCCCCCE--EE--CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 999699983888971378647798-------653999917--82--7995999979999456996046766556689998
Q 000316 1356 QKWELTRINCVSGYYGHEEVVNDI-------CVLSSSGRI--AS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1678)
Q Consensus 1356 rIWDl~tg~~l~tl~gH~~~V~sI-------~fsp~~~~l--aS--~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1424 (1678)
++||+.+++.+..+..+......+ .|++++..+ +. .++.+.+|+..+++......
T Consensus 100 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-------------- 165 (373)
T d2madh_ 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLS-------------- 165 (373)
T ss_pred EEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEEC--------------
T ss_conf 999777893888972688513685168970899858993799998698746776236872899824--------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCE-EEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCC
Q ss_conf 7533345544433457777783786315983067676149979-999978991999988899035886179975567875
Q 000316 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVER-LVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSL 1503 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~-Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~ 1503 (1678)
...++.++++++. +++.+.|+++.+||...+.............+....
T Consensus 166 ------------------------------~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (373)
T d2madh_ 166 ------------------------------SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLL 215 (373)
T ss_pred ------------------------------CCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCE
T ss_conf ------------------------------52069996289919999947993999974774266788630036675304
Q ss_pred CEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEE--EEEECCCCCE----------EEEE-CCCC-----
Q ss_conf 10787508975445865579988999940992999968999299--9993158876----------9998-0899-----
Q 000316 1504 VSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI--ASWRAHDGYV----------TKLA-APED----- 1565 (1678)
Q Consensus 1504 V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i--~~l~gH~~~V----------~sIa-spdg----- 1565 (1678)
.....+. + +..++..+.++.+.+|+..++... ..+..+.... ..++ ++++
T Consensus 216 ~~~~~~~-----------~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 283 (373)
T d2madh_ 216 TQPAQAN-----------K-SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYL 283 (373)
T ss_pred EEEEEEC-----------C-CCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 3458878-----------9-942999258965999976899078977630564757866413674133577149975999
Q ss_pred -----CEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EEEECCCE--EEEEECCC-EEEEECC
Q ss_conf -----999999599939999869999888769505899889--99752999--99994897-5999567
Q 000316 1566 -----HLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWGQD--VISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1566 -----~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg~~--LaSgs~D~-I~iwdl~ 1624 (1678)
..+++...++.+.+||..++ +.+..+. +...+. +|+|||+. +++++.|+ |++||+.
T Consensus 284 ~~~~~~~~~~~~~~~~v~~~d~~t~--~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~ 349 (373)
T d2madh_ 284 LTSEQSAWKLHAAAKEVTSVTGLVG--QTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred ECCCCCEEEEECCCCEEEEEECCCC--CEEEEEC-CCCCEEEEEECCCCCEEEEEEECCCCEEEEEECC
T ss_conf 5488824786258986999989999--6989866-8998258999989998999996799929999999
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=1.4e-20 Score=160.91 Aligned_cols=144 Identities=16% Similarity=0.011 Sum_probs=105.1
Q ss_pred EEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHH--------HHHHHHHHCCCCCHHHHHHHCCCCCC
Q ss_conf 6676335432727999999637777455620999998215776727--------78999985089935588851028987
Q 000316 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--------ESKNFLRLIGVPSFDESSVPGCLRHP 235 (1678)
Q Consensus 164 y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~--------~~~~~l~~~~~~al~Ei~iL~~l~Hp 235 (1678)
+.+.++||+|+||+||+|++ .++..||+|+++.+..... ....+.......+.+|...+..+.|+
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~-------~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 74 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYS-------EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEE-------TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CHHCCEEEECCCEEEEEEEC-------CCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 02277802485659999997-------99999999998604434666556563000888999999778999999981699
Q ss_pred CCCCEEEEEEECCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCE
Q ss_conf 61333169993896778513899998889861999988799999999999999999894892206899897375579941
Q 000316 236 NVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1678)
Q Consensus 236 NIV~l~~~~~~~~~l~lV~E~~~g~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH~~~IiHRDLKP~NILl~~~g~~ 315 (1678)
+++..+++.. .+++|||+++.... .++...+..++.|++.++.|||++||+||||||+|||+++++
T Consensus 75 ~v~~~~~~~~----~~lvme~~~~~~~~--------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-- 140 (191)
T d1zara2 75 AVPKVYAWEG----NAVLMELIDAKELY--------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-- 140 (191)
T ss_dssp SSCCEEEEET----TEEEEECCCCEEGG--------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE--
T ss_pred CCCEEEEECC----CEEEEEEECCCCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEECCC--
T ss_conf 9144998628----88999950456542--------001578999999999999998268889836890361142898--
Q ss_pred EEEEEECCCCCCCC
Q ss_conf 59997268854478
Q 000316 316 WLYICDKPLVGFNS 329 (1678)
Q Consensus 316 ~iKI~DFGlar~~~ 329 (1678)
++|+|||+|+...
T Consensus 141 -~~liDFG~a~~~~ 153 (191)
T d1zara2 141 -IWIIDFPQSVEVG 153 (191)
T ss_dssp -EEECCCTTCEETT
T ss_pred -EEEEECCCCCCCC
T ss_conf -9998778843089
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=1.3e-14 Score=117.57 Aligned_cols=270 Identities=8% Similarity=0.075 Sum_probs=169.2
Q ss_pred EEEEECCCCEEEEECC-CCEEE--EECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEE---ECCCC
Q ss_conf 9999199979999689-84268--941266647999991499989997217897775999969998388897---13786
Q 000316 1301 LGRVGGLKDESPWKIK-ASILS--SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY---YGHEE 1374 (1678)
Q Consensus 1301 LasgS~D~~v~lWd~~-g~~l~--tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl---~gH~~ 1374 (1678)
+++++.|++|++|+++ ...+. ....|.+.|.+++|+|||++|++++.+ |++|++|++.......++ ..+..
T Consensus 7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~---d~~i~~~~i~~~~~~~~~~~~~~~~~ 83 (333)
T d1ri6a_ 7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP---EFRVLAYRIAPDDGALTFAAESALPG 83 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT---TTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECC---CCEEEEEEEECCCCCEEEEEECCCCC
T ss_conf 998789993899998399976999997579988689995897999999778---99699999968987079853013699
Q ss_pred CEEEEEECCCCCCE--EEC-CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 47798653999917--827-995999979999456996046766556689998753334554443345777778378631
Q 000316 1375 VVNDICVLSSSGRI--ASC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAF 1451 (1678)
Q Consensus 1375 ~V~sI~fsp~~~~l--aS~-DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f 1451 (1678)
.+..++|+|++.++ ++. +++|.+|+............. .
T Consensus 84 ~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~--------------------------------------~ 125 (333)
T d1ri6a_ 84 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV--------------------------------------E 125 (333)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE--------------------------------------C
T ss_pred CCEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEECCCCC--------------------------------------C
T ss_conf 85499995999887420568883022001110000001003--------------------------------------7
Q ss_pred CCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE-EE
Q ss_conf 5983067676149979999978-991999988899035886179975567875107875089754458655799889-99
Q 000316 1452 DGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI-AA 1529 (1678)
Q Consensus 1452 ~~~~vt~ia~sp~g~~Lvsgs~-DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~L-as 1529 (1678)
.+....++.++++++.++.+.. +..+.+|+..+......................+++.+ ++..+ .+
T Consensus 126 ~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~-----------~~~~~~~~ 194 (333)
T d1ri6a_ 126 GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-----------NEQYAYCV 194 (333)
T ss_dssp CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECT-----------TSSEEEEE
T ss_pred CCCCCEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCEEEECEEEEEECCCCCCEEEEEC-----------CCEEEEEE
T ss_conf 7853149886301013102565542056897326874100100013340388752799960-----------20147862
Q ss_pred EECCCEEEEEECCCCC----EEEEEE------CCCCCEEEEE-CCCCCEE-EEEECCCCEEEEECCCCCCCCCEEEEC--
Q ss_conf 9409929999689992----999993------1588769998-0899999-999599939999869999888769505--
Q 000316 1530 GLSSGQCRLFDVRSGN----VIASWR------AHDGYVTKLA-APEDHLL-VSSSLDKTLRIWDLRRNWPSQPTVFKG-- 1595 (1678)
Q Consensus 1530 Gs~Dg~I~iWD~rtg~----~i~~l~------gH~~~V~sIa-spdg~~L-aSgS~DgtI~IWDl~~~~~~~~~~l~g-- 1595 (1678)
....+...+|+..... ...... ........++ +++++++ +++..++++.+|++.... ......+
T Consensus 195 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 272 (333)
T d1ri6a_ 195 NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG--SVLSKEGFQ 272 (333)
T ss_dssp ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--CCEEEEEEE
T ss_pred CCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCC--CEEEEEEEE
T ss_conf 046672178851035552021002234306877655312689951567205504568827878873999--789999996
Q ss_pred -CCCCE--EEEEECCCEEEEEEC-CC-EEEEECC
Q ss_conf -89988--999752999999948-97-5999567
Q 000316 1596 -HTNGI--SGFSVWGQDVISISN-NK-IGLSSLS 1624 (1678)
Q Consensus 1596 -H~~~V--~afSpdg~~LaSgs~-D~-I~iwdl~ 1624 (1678)
....+ .+|+|||++|++++. ++ |.+|++.
T Consensus 273 ~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id 306 (333)
T d1ri6a_ 273 PTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 306 (333)
T ss_dssp ECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEE
T ss_conf 7899762899907989999998899939999997
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.75 E-value=3.4e-15 Score=121.70 Aligned_cols=118 Identities=8% Similarity=-0.012 Sum_probs=85.6
Q ss_pred EECCCCCCCCCCEEEEE-----ECCCCEEEEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECC------CCCCCEE
Q ss_conf 10599998899869999-----199979999689-84268941266647999991499989997217------8977759
Q 000316 1288 FPTPAASWDGPDFLGRV-----GGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIG------PGFKGTV 1355 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~Lasg-----S~D~~v~lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d------~~~DgtV 1355 (1678)
+++|||.. ++.. +.+.++.+||.. ++.+.++.++..+ .++|+|||++++.++.. ...|+.|
T Consensus 8 a~spdg~~-----~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 8 APAPDARR-----VYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCCTTE-----EEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EECCCCCE-----EEEEECCCCCCCCEEEEEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEECCCCCCCCCCCCCEE
T ss_conf 65899999-----99982664777671999999999499999899998--569948999999996777642015899989
Q ss_pred EEEECCCCEEEEEEECCCC-------CEEEEEECCCCCCE--EEC--CCCEEEEECCCCCEEEEECCC
Q ss_conf 9996999838889713786-------47798653999917--827--995999979999456996046
Q 000316 1356 QKWELTRINCVSGYYGHEE-------VVNDICVLSSSGRI--ASC--DGTLHVWNSQTGKLLSVFAEQ 1412 (1678)
Q Consensus 1356 rIWDl~tg~~l~tl~gH~~-------~V~sI~fsp~~~~l--aS~--DgtIkIWD~~tg~~i~~l~~~ 1412 (1678)
++||+.+++.+..+..+.. ....++|++++..+ ++. +..+.+|+..+++.+..+..+
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP 148 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EEEECCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECC
T ss_conf 99999999798898058864031179873499933887157732798820454305788376677058
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.72 E-value=2.6e-13 Score=107.95 Aligned_cols=286 Identities=10% Similarity=-0.037 Sum_probs=166.4
Q ss_pred ECCCCCCEEEEEEECCCCEEEEEECC-CCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEE-----------
Q ss_conf 41266647999991499989997217-897775999969998388897137864779865399991782-----------
Q 000316 1323 IRAHHGALRSVAVGQDECTVFTAGIG-PGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS----------- 1390 (1678)
Q Consensus 1323 l~gH~~~V~svafspdg~~LaSgs~d-~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS----------- 1390 (1678)
..++.+++.+++++||++.++..... .+.++.|.+||..+++.+.++.++... .++|+|++.+++.
T Consensus 16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~ 93 (373)
T d2madh_ 16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKG 93 (373)
T ss_pred CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEEECCCCCCCC
T ss_conf 456789865630189997899973422578765999989999799999579886--079868999899996057753212
Q ss_pred -CCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEE
Q ss_conf -7995999979999456996046766556689998753334554443345777778378631598306767614997999
Q 000316 1391 -CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLV 1469 (1678)
Q Consensus 1391 -~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lv 1469 (1678)
.|+.|++||..+++.+..+..+... ......+ ...+.++++++.++
T Consensus 94 ~~~~~v~v~D~~t~~~~~~~~~~~~~------------------------------~~~~~~~---~~~~~~s~dg~~~~ 140 (373)
T d2madh_ 94 KRTDYVEVFDPVTFLPIADIELPDAP------------------------------RFDVGPY---SWMNANTPNNADLL 140 (373)
T ss_pred CCCEEEEEEECCCCCEEEEEECCCCC------------------------------EEEECCC---CCCEEEEECCCCEE
T ss_conf 45318999977789388897268851------------------------------3685168---97089985899379
Q ss_pred EEE--CCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEE
Q ss_conf 997--899199998889903588617997556787510787508975445865579988999940992999968999299
Q 000316 1470 VGI--GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI 1547 (1678)
Q Consensus 1470 sgs--~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i 1547 (1678)
... .++.+.+|+..+.+....... ..++.+.+ ++. ..+++++.|+.+.+||..++...
T Consensus 141 v~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~s~------~g~----~~~v~~~~dg~~~~~~~~~~~~~ 200 (373)
T d2madh_ 141 FFQFAAGPAVGLVVQGGSSDDQLLSS----------PTCYHIHP------GAP----STFYLLCAQGGLAKTDHAGGAAG 200 (373)
T ss_pred EEEECCCCCEEEEECCCCEEEEEECC----------CEEEEEEC------CCC----CEEEEECCCCEEEEEECCCCEEE
T ss_conf 99986987467762368728998245----------20699962------899----19999947993999974774266
Q ss_pred EEEECCC------CCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCE------------EEEEECCCE
Q ss_conf 9993158------8769998089999999959993999986999988876950589988------------999752999
Q 000316 1548 ASWRAHD------GYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGI------------SGFSVWGQD 1609 (1678)
Q Consensus 1548 ~~l~gH~------~~V~sIaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V------------~afSpdg~~ 1609 (1678)
.....+. .....+....+..++..+.++++.+|+..............+.... .++++++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 280 (373)
T d2madh_ 201 AGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDG 280 (373)
T ss_pred EEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCE
T ss_conf 78863003667530434588789942999258965999976899078977630564757866413674133577149975
Q ss_pred EE----------EEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCC--EEEEEECCCCEEE
Q ss_conf 99----------994897-5999567788978961000310234306987657489999944998--9999948983999
Q 000316 1610 VI----------SISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSR--LFLVGTEDGYLRL 1676 (1678)
Q Consensus 1610 La----------Sgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~--lLatgs~DG~IrI 1676 (1678)
++ +...++ +.+||.. .+. .+... .+...+.+++|+||++ ++++++.||+|++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~v~~~d~~-----t~~------~~~~~----~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v 345 (373)
T d2madh_ 281 IYLLTSEQSAWKLHAAAKEVTSVTGL-----VGQ------TSSQI----SLGHDVDAISVAQDGGPDLYALSAGTEVLHI 345 (373)
T ss_pred EEEECCCCCEEEEECCCCEEEEEECC-----CCC------EEEEE----CCCCCEEEEEECCCCCEEEEEEECCCCEEEE
T ss_conf 99954888247862589869999899-----996------98986----6899825899998999899999679992999
Q ss_pred CC
Q ss_conf 09
Q 000316 1677 CC 1678 (1678)
Q Consensus 1677 wd 1678 (1678)
||
T Consensus 346 ~D 347 (373)
T d2madh_ 346 YD 347 (373)
T ss_pred EE
T ss_conf 99
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.72 E-value=1.6e-13 Score=109.57 Aligned_cols=269 Identities=9% Similarity=0.077 Sum_probs=137.4
Q ss_pred EEEEECCCCCCCEEEEEECCCCEEEEE--EECCCCCEEEEEECCCCCCE-EEC--CCCEEEEECCCCCEEEEECCCCCCC
Q ss_conf 999721789777599996999838889--71378647798653999917-827--9959999799994569960467665
Q 000316 1342 VFTAGIGPGFKGTVQKWELTRINCVSG--YYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDS 1416 (1678)
Q Consensus 1342 LaSgs~d~~~DgtVrIWDl~tg~~l~t--l~gH~~~V~sI~fsp~~~~l-aS~--DgtIkIWD~~tg~~i~~l~~~~~~~ 1416 (1678)
+++++. |++|++|++.+...+.. ...|.+.|.+++|+|++..| ++. |++|++|++..+.....+..+..
T Consensus 7 ~v~~~~----~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~-- 80 (333)
T d1ri6a_ 7 YIASPE----SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA-- 80 (333)
T ss_dssp EEEEGG----GTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE--
T ss_pred EEECCC----CCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECC--
T ss_conf 998789----99389999839997699999757998868999589799999977899699999968987079853013--
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCEEEEEEECCC
Q ss_conf 566899987533345544433457777783786315983067676149979999978-9919999888990358861799
Q 000316 1417 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEP 1495 (1678)
Q Consensus 1417 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~-DgtIkiWDl~tg~~i~~l~~~~ 1495 (1678)
.+.....++++|+|+.+++++. ++++.+|+..............
T Consensus 81 -----------------------------------~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~ 125 (333)
T d1ri6a_ 81 -----------------------------------LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE 125 (333)
T ss_dssp -----------------------------------CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC
T ss_pred -----------------------------------CCCCCEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEECCCCCC
T ss_conf -----------------------------------699854999959998874205688830220011100000010037
Q ss_pred CCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEE-CCCEEEEEECCCCCEEEEE------ECCCCCEEEEE-CCCCCE
Q ss_conf 755678751078750897544586557998899994-0992999968999299999------31588769998-089999
Q 000316 1496 TELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL-SSGQCRLFDVRSGNVIASW------RAHDGYVTKLA-APEDHL 1567 (1678)
Q Consensus 1496 ~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs-~Dg~I~iWD~rtg~~i~~l------~gH~~~V~sIa-spdg~~ 1567 (1678)
+...+.++.++ ++++.+++++ .+..+.+|+..+....... .........++ ++++..
T Consensus 126 ----~~~~~~~v~~s-----------~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~ 190 (333)
T d1ri6a_ 126 ----GLDGCHSANIS-----------PDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 190 (333)
T ss_dssp ----CCTTBCCCEEC-----------TTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred ----CCCCCEEEEEE-----------ECCEEEECCCCCCCEEEEEEECCCCCCEEEECEEEEEECCCCCCEEEEECCCEE
T ss_conf ----78531498863-----------010131025655420568973268741001000133403887527999602014
Q ss_pred EEEE-ECCCCEEEEECCCCCCCCC--EEEEC------CCCCEE--EEEECCCEEEEEE-CCC-EEEEECCCCCCCCCCCE
Q ss_conf 9999-5999399998699998887--69505------899889--9975299999994-897-59995677889789610
Q 000316 1568 LVSS-SLDKTLRIWDLRRNWPSQP--TVFKG------HTNGIS--GFSVWGQDVISIS-NNK-IGLSSLSKSADEDGQHR 1634 (1678)
Q Consensus 1568 LaSg-S~DgtI~IWDl~~~~~~~~--~~l~g------H~~~V~--afSpdg~~LaSgs-~D~-I~iwdl~~~~~~~g~~~ 1634 (1678)
++.. ...+...+|+......... ..... ...... +++++++.++... .++ +.+|++.... +..
T Consensus 191 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~---~~~- 266 (333)
T d1ri6a_ 191 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG---SVL- 266 (333)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS---CCE-
T ss_pred EEEECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCEEEEEEECCCC---CEE-
T ss_conf 7862046672178851035552021002234306877655312689951567205504568827878873999---789-
Q ss_pred ECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEE-CCCCEEEC
Q ss_conf 00310234306987657489999944998999994-89839990
Q 000316 1635 LVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGT-EDGYLRLC 1677 (1678)
Q Consensus 1635 ~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs-~DG~IrIw 1677 (1678)
...... .....+.+++|+|||+.|++++ .++.|++|
T Consensus 267 ----~~~~~~---~~~~~p~~~a~spDGk~l~va~~~~~~v~v~ 303 (333)
T d1ri6a_ 267 ----SKEGFQ---PTETQPRGFNVDHSGKYLIAAGQKSHHISVY 303 (333)
T ss_dssp ----EEEEEE---ECSSSCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred ----EEEEEE---CCCCCEEEEEEECCCCEEEEEECCCCEEEEE
T ss_conf ----999996---7899762899907989999998899939999
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.72 E-value=4e-15 Score=121.23 Aligned_cols=252 Identities=13% Similarity=0.035 Sum_probs=113.9
Q ss_pred EECCCCCCCCCCEEEEE----------ECCCCEEEEECC-CCEEEEECCCCC-------CEEEEEEECCCCEEEEEECCC
Q ss_conf 10599998899869999----------199979999689-842689412666-------479999914999899972178
Q 000316 1288 FPTPAASWDGPDFLGRV----------GGLKDESPWKIK-ASILSSIRAHHG-------ALRSVAVGQDECTVFTAGIGP 1349 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~Lasg----------S~D~~v~lWd~~-g~~l~tl~gH~~-------~V~svafspdg~~LaSgs~d~ 1349 (1678)
+|||||+. |+.+ +.|+.+++||.. +..+..+..+.. ....++|+++++.++.++.+
T Consensus 53 a~SpDg~~-----l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~- 126 (355)
T d2bbkh_ 53 VVADDGSF-----IAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS- 126 (355)
T ss_dssp EECTTSSC-----EEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS-
T ss_pred EECCCCCE-----EEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCEEEEECCC-
T ss_conf 99489999-----999967776420158999899999999979889805886403117987349993388715773279-
Q ss_pred CCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE-EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 977759999699983888971378647798653999917-8279959999799994569960467665566899987533
Q 000316 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428 (1678)
Q Consensus 1350 ~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l-aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1428 (1678)
.+..+.+|+..+++....+..+...... .. .....+ .+.|++..+|...................
T Consensus 127 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~----------- 192 (355)
T d2bbkh_ 127 -PAPAVGVVDLEGKAFKRMLDVPDCYHIF-PT-APDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE----------- 192 (355)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSEEEEE-EE-ETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT-----------
T ss_pred -CCCEEEEEECCCCCEEEEEECCCCCEEE-EC-CCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCE-----------
T ss_conf -8820454305788376677058740473-06-996369993899989998347873799962433300-----------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEE--EEEECCCCCC---C-CCC
Q ss_conf 345544433457777783786315983067676149979999978991999988899035--8861799755---6-787
Q 000316 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL--HLWRGEPTEL---G-FPS 1502 (1678)
Q Consensus 1429 ~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i--~~l~~~~~~v---~-~~~ 1502 (1678)
....+....+.+++..++.++.++.+.+|+...+... .....+.... . .+.
T Consensus 193 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 249 (355)
T d2bbkh_ 193 -----------------------DEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPG 249 (355)
T ss_dssp -----------------------TSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEEC
T ss_pred -----------------------ECCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECC
T ss_conf -----------------------011061021538997388746998299996589907998445784412685433035
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCEEEEEECC----------CEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCC--EEE
Q ss_conf 5107875089754458655799889999409----------9299996899929999931588769998-08999--999
Q 000316 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSS----------GQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDH--LLV 1569 (1678)
Q Consensus 1503 ~V~~ia~~~~~~~s~dg~~p~g~~LasGs~D----------g~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~--~La 1569 (1678)
....+++ .+++..++....+ ..|.+||..+++.+..+.. ...+.+++ +|||+ +++
T Consensus 250 ~~~~~~~-----------~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~-~~~~~~~a~spDG~~~l~v 317 (355)
T d2bbkh_ 250 GWQQVAY-----------HRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYA 317 (355)
T ss_dssp SSSCEEE-----------ETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEE
T ss_pred CEEEEEE-----------ECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECC-CCCEEEEEECCCCCEEEEE
T ss_conf 1089998-----------079976788740687126517997599986788849899668-9987799992899969999
Q ss_pred EEECCCCEEEEECCCCCCCCCEEEECC
Q ss_conf 995999399998699998887695058
Q 000316 1570 SSSLDKTLRIWDLRRNWPSQPTVFKGH 1596 (1678)
Q Consensus 1570 SgS~DgtI~IWDl~~~~~~~~~~l~gH 1596 (1678)
+++.|++|++||+.++ +.+.++.++
T Consensus 318 ~~~~d~~i~v~D~~tg--~~~~~i~~~ 342 (355)
T d2bbkh_ 318 LSTGDKTLYIHDAESG--EELRSVNQL 342 (355)
T ss_dssp EETTTTEEEEEETTTC--CEEEEECCC
T ss_pred EECCCCEEEEEECCCC--CEEEEEECC
T ss_conf 9789998999999999--899999286
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.68 E-value=2.5e-14 Score=115.45 Aligned_cols=273 Identities=11% Similarity=-0.007 Sum_probs=183.1
Q ss_pred EEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEE-CCCCCEEEEEECCCCCCE-EE--CCCCEEEEECCCCCEEEE
Q ss_conf 99914999899972178977759999699983888971-378647798653999917-82--799599997999945699
Q 000316 1333 VAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI-AS--CDGTLHVWNSQTGKLLSV 1408 (1678)
Q Consensus 1333 vafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~-gH~~~V~sI~fsp~~~~l-aS--~DgtIkIWD~~tg~~i~~ 1408 (1678)
++|+++++++++++. |++|.+||+.+++.+.+++ .|...+.+++|+|++.++ ++ .|++|.+||+.+++.+..
T Consensus 2 ~a~~~~~~~l~~~~~----~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~ 77 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNY----PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 77 (346)
T ss_dssp CCCCTTCEEEEEEET----TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCCCCCEEEEECC----CCEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEE
T ss_conf 558899969999869----9979999999998999999489997045999789899999978999399996756713123
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEE------------CCCC
Q ss_conf 6046766556689998753334554443345777778378631598306767614997999997------------8991
Q 000316 1409 FAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI------------GNGS 1476 (1678)
Q Consensus 1409 l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs------------~Dgt 1476 (1678)
+.......... .....++++++|+.+++++ .++.
T Consensus 78 ~~~~~~~~~~~----------------------------------~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~ 123 (346)
T d1jmxb_ 78 ANLSSVPGEVG----------------------------------RSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123 (346)
T ss_dssp EESCCSTTEEE----------------------------------ECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCE
T ss_pred ECCCCCCCCCC----------------------------------CCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCE
T ss_conf 10365434547----------------------------------74179999058888999705775215651467624
Q ss_pred EEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCC
Q ss_conf 99998889903588617997556787510787508975445865579988999940992999968999299999315887
Q 000316 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1678)
Q Consensus 1477 IkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~ 1556 (1678)
+.+||..+++....+..+.. +..+..+.+. .++..++ . ++.+.+||..+++.+..+..+..
T Consensus 124 i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----------~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~- 184 (346)
T d1jmxb_ 124 LEVFSTADGLEAKPVRTFPM----PRQVYLMRAA-----------DDGSLYV-A--GPDIYKMDVKTGKYTVALPLRNW- 184 (346)
T ss_dssp EEEEEGGGGGGBCCSEEEEC----CSSCCCEEEC-----------TTSCEEE-E--SSSEEEECTTTCCEEEEECSTTC-
T ss_pred EEEEECCCCEEEEEEEEEEC----CCCEEEEEEC-----------CCCEEEE-E--CCCCEEEECCCCCEEEEEECCCC-
T ss_conf 89985256326568873102----4743999952-----------7878998-4--79626998069978999964898-
Q ss_pred EEEEE-CCC--------------------------CCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EEEECC
Q ss_conf 69998-089--------------------------9999999599939999869999888769505899889--997529
Q 000316 1557 VTKLA-APE--------------------------DHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GFSVWG 1607 (1678)
Q Consensus 1557 V~sIa-spd--------------------------g~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--afSpdg 1607 (1678)
...+. +|+ ...++++..++.+.+|+..++. ........+...+. .+++++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 263 (346)
T d1jmxb_ 185 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK-THTQEFADLTELYFTGLRSPKD 263 (346)
T ss_dssp CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC-EEEEEEEECSSCEEEEEECSSC
T ss_pred CCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEECCCCC-EEEEEEECCCCEEEEEEEECCC
T ss_conf 662377125528999864998167651231112673257540478349999777883-6878763156606888971799
Q ss_pred CEEEEEECCCEEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEECC
Q ss_conf 99999948975999567788978961000310234306987657489999944998999994898399909
Q 000316 1608 QDVISISNNKIGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRLFLVGTEDGYLRLCC 1678 (1678)
Q Consensus 1608 ~~LaSgs~D~I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~lLatgs~DG~IrIwd 1678 (1678)
..++.+..+.+.+||.. .+. .+.... +...+.+++|+||++.+++++.||.|++||
T Consensus 264 ~~~~~~~~~~v~v~d~~-----~~~------~~~~~~----~~~~~~~va~s~DG~~l~v~~~d~~v~v~D 319 (346)
T d1jmxb_ 264 PNQIYGVLNRLAKYDLK-----QRK------LIKAAN----LDHTYYCVAFDKKGDKLYLGGTFNDLAVFN 319 (346)
T ss_dssp TTEEEEEESEEEEEETT-----TTE------EEEEEE----CSSCCCEEEECSSSSCEEEESBSSEEEEEE
T ss_pred CEEEEECCCEEEEEECC-----CCC------EEEEEC----CCCCEEEEEECCCCCEEEEEECCCCEEEEE
T ss_conf 78999429838999899-----993------999974----999778999968999999994899299999
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.59 E-value=6.9e-13 Score=104.88 Aligned_cols=114 Identities=4% Similarity=-0.066 Sum_probs=81.1
Q ss_pred ECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEE-----ECCCCCCEEEEEEECCCCEEEEEECC-----CCCCCEEEE
Q ss_conf 0599998899869999199979999689-842689-----41266647999991499989997217-----897775999
Q 000316 1289 PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSS-----IRAHHGALRSVAVGQDECTVFTAGIG-----PGFKGTVQK 1357 (1678)
Q Consensus 1289 fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~t-----l~gH~~~V~svafspdg~~LaSgs~d-----~~~DgtVrI 1357 (1678)
|.+++.+ +. ..|+++.+||+. +..... +.+|...|.++.|||||++|+.++.. .++++.+.+
T Consensus 24 W~~d~~~-----~~--~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l 96 (470)
T d2bgra1 24 WISDHEY-----LY--KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (470)
T ss_dssp ECSSSEE-----EE--ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ECCCCEE-----EE--ECCCCEEEEECCCCCEEEEECHHHHHHCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCEEEE
T ss_conf 6899979-----99--7599499998899978999701564431676540599898897999977710001046734999
Q ss_pred EECCCCEEEEEEECCCCCEEEEEECCCCCCEEEC-CCCEEEEECCCCCEEEEEC
Q ss_conf 9699983888971378647798653999917827-9959999799994569960
Q 000316 1358 WELTRINCVSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFA 1410 (1678)
Q Consensus 1358 WDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS~-DgtIkIWD~~tg~~i~~l~ 1410 (1678)
||+++++. ..+.+|.+.+..+.|+|++..+|.. |+.+.+|+..+++..+...
T Consensus 97 ~d~~~~~~-~~l~~~~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~~g~~~~~t~ 149 (470)
T d2bgra1 97 YDLNKRQL-ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITW 149 (470)
T ss_dssp EETTTTEE-CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCS
T ss_pred EECCCCCC-CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCCEEEEEE
T ss_conf 98988851-312468742310101467641357514641379889994653210
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.53 E-value=3.5e-12 Score=99.75 Aligned_cols=120 Identities=8% Similarity=-0.124 Sum_probs=82.0
Q ss_pred EECCCCCCCCCCEE-EEEECCCCEE--EEECC-CCEEEEECCCCCCEEEEEEECCCCEEEEEECC------CCCCCEEEE
Q ss_conf 10599998899869-9991999799--99689-84268941266647999991499989997217------897775999
Q 000316 1288 FPTPAASWDGPDFL-GRVGGLKDES--PWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIG------PGFKGTVQK 1357 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~L-asgS~D~~v~--lWd~~-g~~l~tl~gH~~~V~svafspdg~~LaSgs~d------~~~DgtVrI 1357 (1678)
++++++.. ..+ ..++.+++.+ +||.. +..+.+..++..+ .++|+|||+.++.++.. .+.|++|++
T Consensus 26 a~~~~~~~---~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v 100 (368)
T d1mdah_ 26 GPGAISRR---SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEV 100 (368)
T ss_dssp CCCCCTTE---EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEE
T ss_pred CCCCCCCC---EEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCC--CCEECCCCCEEEEECCCCCCCCCCCCCCEEEE
T ss_conf 55898761---26972045788621799708998377888578777--51398999889997556764010356786999
Q ss_pred EECCCCEEEEEEECCCC-------CEEEEEECCCCCCE--EEC-CCCEEEEECCCCCEEEEECCC
Q ss_conf 96999838889713786-------47798653999917--827-995999979999456996046
Q 000316 1358 WELTRINCVSGYYGHEE-------VVNDICVLSSSGRI--ASC-DGTLHVWNSQTGKLLSVFAEQ 1412 (1678)
Q Consensus 1358 WDl~tg~~l~tl~gH~~-------~V~sI~fsp~~~~l--aS~-DgtIkIWD~~tg~~i~~l~~~ 1412 (1678)
||..+++.+..+..+.. ....++|+++++++ ++. ++++.+||+.+++....+..+
T Consensus 101 ~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~ 165 (368)
T d1mdah_ 101 FDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSA 165 (368)
T ss_dssp ECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECS
T ss_pred EECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECC
T ss_conf 98999938306437854210246886405887899899999689985999989989386786046
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.52 E-value=5.1e-12 Score=98.55 Aligned_cols=252 Identities=7% Similarity=-0.070 Sum_probs=139.0
Q ss_pred CCEEEECCCCCCCCCCEEEEEE----------CCCCEEEEECC-CCEEEEECCCCC-------CEEEEEEECCCCEEEEE
Q ss_conf 9168105999988998699991----------99979999689-842689412666-------47999991499989997
Q 000316 1284 PWFWFPTPAASWDGPDFLGRVG----------GLKDESPWKIK-ASILSSIRAHHG-------ALRSVAVGQDECTVFTA 1345 (1678)
Q Consensus 1284 ~~V~~fSpdg~~~~~~~LasgS----------~D~~v~lWd~~-g~~l~tl~gH~~-------~V~svafspdg~~LaSg 1345 (1678)
...-+|||||.. ++.++ .|+.+++||.. +..+..+..+.. ....++|+|||++++.+
T Consensus 67 ~~~~a~spDg~~-----i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va 141 (368)
T d1mdah_ 67 LSLAVAGHSGSD-----FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFF 141 (368)
T ss_dssp TCEEEECTTSSC-----EEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEE
T ss_pred CCCCEECCCCCE-----EEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEE
T ss_conf 775139899988-----999755676401035678699998999938306437854210246886405887899899999
Q ss_pred ECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE-EECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 2178977759999699983888971378647798653999917-827995999979999456996046766556689998
Q 000316 1346 GIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1678)
Q Consensus 1346 s~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l-aS~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~ 1424 (1678)
..+ ++++.+||+.+++....+..+......- ......+ .+.||++.+|+...+............
T Consensus 142 ~~~---~~~v~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~--------- 207 (368)
T d1mdah_ 142 LFG---SSAAAGLSVPGASDDQLTKSASCFHIHP--GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCT--------- 207 (368)
T ss_dssp ECS---SSCEEEEEETTTEEEEEEECSSCCCCEE--EETTEEECCCCTTSCEEEECCSSCCCCEECCCCSC---------
T ss_pred ECC---CCEEEEEECCCCCEEEEEECCCCCEECC--CCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCC---------
T ss_conf 689---9859999899893867860467523746--99823999948998899982689626665303111---------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEE--CCCCC---CC
Q ss_conf 75333455444334577777837863159830676761499799999789919999888990358861--79975---56
Q 000316 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWR--GEPTE---LG 1499 (1678)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~--~~~~~---v~ 1499 (1678)
...........+ .+++..+. ..++.+.+++...+....... ..... ..
T Consensus 208 ---------------~~~~~~~~~~~~----------~~~g~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (368)
T d1mdah_ 208 ---------------GAQNCSSQAAQA----------NYPGMLVW--AVASSILQGDIPAAGATMKAAIDGNESGRKADN 260 (368)
T ss_dssp ---------------TTSCBCSCCEEE----------TTTTEEEE--CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTT
T ss_pred ---------------CCCCCCEEECCC----------CCCCEEEE--ECCCCEEEEEECCCCEEEEEECCCCCCEEEEEE
T ss_conf ---------------356664660101----------55868999--348977999606993699760246543045540
Q ss_pred -CCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECC---------CEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCC--
Q ss_conf -7875107875089754458655799889999409---------9299996899929999931588769998-08999--
Q 000316 1500 -FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSS---------GQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDH-- 1566 (1678)
Q Consensus 1500 -~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~D---------g~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~-- 1566 (1678)
.+.....++++ +++..++....+ ..|.+||..+++.+..+.. ...+.+++ +|||+
T Consensus 261 ~~~~g~~~~a~~-----------~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~~a~spDG~~~ 328 (368)
T d1mdah_ 261 FRSAGFQMVAKL-----------KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN-GHDSDAIIAAQDGASD 328 (368)
T ss_dssp EEECSSSCEEEE-----------TTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE-EEEECEEEECCSSSCE
T ss_pred ECCCCCEEEEEC-----------CCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECC-CCCEEEEEECCCCCEE
T ss_conf 127883568871-----------7998799983589733405886499998999948689558-9965179999899989
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCEEEEC
Q ss_conf 99999599939999869999888769505
Q 000316 1567 LLVSSSLDKTLRIWDLRRNWPSQPTVFKG 1595 (1678)
Q Consensus 1567 ~LaSgS~DgtI~IWDl~~~~~~~~~~l~g 1595 (1678)
++++++.|++|++||..++ +.+..+..
T Consensus 329 ly~s~~~~~~v~v~D~~tg--k~~~~i~~ 355 (368)
T d1mdah_ 329 NYANSAGTEVLDIYDAASD--QDQSSVEL 355 (368)
T ss_dssp EEEEETTTTEEEEEESSSC--EEEEECCC
T ss_pred EEEEECCCCEEEEEECCCC--CEEEEEEC
T ss_conf 9999489996999989999--79999879
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.47 E-value=5.2e-14 Score=113.05 Aligned_cols=314 Identities=8% Similarity=-0.029 Sum_probs=172.4
Q ss_pred CCCCCCCEEEEEECCCCEEEEECC-CCEEEEEC------------------------------CCCCCEEEEEEECCCCE
Q ss_conf 998899869999199979999689-84268941------------------------------26664799999149998
Q 000316 1293 ASWDGPDFLGRVGGLKDESPWKIK-ASILSSIR------------------------------AHHGALRSVAVGQDECT 1341 (1678)
Q Consensus 1293 g~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~------------------------------gH~~~V~svafspdg~~ 1341 (1678)
|.+|+.-.+.|++.++++++|++. ++.++++. .|.-......++|||++
T Consensus 6 G~~De~y~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~ 85 (441)
T d1qnia2 6 GELDEYYGFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKY 85 (441)
T ss_dssp TCCCSEEEEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCE
T ss_conf 87787799996887774899967898079999767578987999888650478313322567556777221032688888
Q ss_pred EEEEECCCCCCCEEEEEECCCCEEEEEEE-CCCCCEEEEEECCCCCCE---EECCCCE------------------EEEE
Q ss_conf 99972178977759999699983888971-378647798653999917---8279959------------------9997
Q 000316 1342 VFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRI---ASCDGTL------------------HVWN 1399 (1678)
Q Consensus 1342 LaSgs~d~~~DgtVrIWDl~tg~~l~tl~-gH~~~V~sI~fsp~~~~l---aS~DgtI------------------kIWD 1399 (1678)
++..... +++|.+||+.++++...+. .+...+..++|++++... +.++..+ ..+|
T Consensus 86 lfV~d~~---~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD 162 (441)
T d1qnia2 86 LFINDKA---NTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAID 162 (441)
T ss_dssp EEEEETT---TTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEE
T ss_pred EEEECCC---CCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 9997389---9979999887784755795678878643487056998999956677544367663001455532388663
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCC-CEE
Q ss_conf 9999456996046766556689998753334554443345777778378631598306767614997999997899-199
Q 000316 1400 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG-SLR 1478 (1678)
Q Consensus 1400 ~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~Dg-tIk 1478 (1678)
..+.+...+.... + ....++++++|+.+++.+.+. .+.
T Consensus 163 ~~t~~v~~qI~v~----------------------------------------~-~p~~v~~spdGk~a~vt~~nse~~~ 201 (441)
T d1qnia2 163 AETMDVAWQVIVD----------------------------------------G-NLDNTDADYTGKYATSTCYNSERAV 201 (441)
T ss_dssp TTTCSEEEEEEES----------------------------------------S-CCCCEEECSSSSEEEEEESCTTCCS
T ss_pred CCCCEEEEEEECC----------------------------------------C-CCCCEEECCCCCEEEEEECCCCCEE
T ss_conf 7556064787369----------------------------------------9-8654698799998999851787318
Q ss_pred EEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 99888990358861799755678751078750897544586557998899994099299996899929999931588769
Q 000316 1479 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1558 (1678)
Q Consensus 1479 iWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~ 1558 (1678)
.++..+.+........ ..-..+ .+. ++|+++..+ .++.+.+++....+.+..+..... ..
T Consensus 202 ~id~~t~~~~d~i~v~-------n~p~~~------~~~-----~dGk~~~v~-~~~v~vvd~~~~~~v~~~IPvgks-Ph 261 (441)
T d1qnia2 202 DLAGTMRNDRDWVVVF-------NVERIA------AAV-----KAGNFKTIG-DSKVPVVDGRGESEFTRYIPVPKN-PH 261 (441)
T ss_dssp SHHHHTCSSBCEEEEE-------EHHHHH------HHH-----HTTCCBCCT-TCCCCEEECSSSCSSEEEECCBSS-CC
T ss_pred EEECCCCCEEEEEEEC-------CCCCEE------EEE-----CCCCEEEEC-CCCCEEEECCCCCCEEEEEECCCC-CC
T ss_conf 9851571217899968-------851107------996-----699999969-998289980368706899717988-66
Q ss_pred EEE-CCCCCEE-EEEECCCCEEEEECCCCC------CCCCEEEECCCC----CEE-EEEECCCEEEEEECCC-EEEEECC
Q ss_conf 998-0899999-999599939999869999------888769505899----889-9975299999994897-5999567
Q 000316 1559 KLA-APEDHLL-VSSSLDKTLRIWDLRRNW------PSQPTVFKGHTN----GIS-GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1559 sIa-spdg~~L-aSgS~DgtI~IWDl~~~~------~~~~~~l~gH~~----~V~-afSpdg~~LaSgs~D~-I~iwdl~ 1624 (1678)
.+. +|||+++ +++..|++|.+||+.+.. ......+.++.. +.+ +|+++|..+.|..-|. |..|++.
T Consensus 262 Gv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~ 341 (441)
T d1qnia2 262 GLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341 (441)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred CCEECCCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCEECCCCEEEECCCCCCEEEEECCC
T ss_conf 72689998789990775993899983224457525688424799601455476652265785599852443168972354
Q ss_pred CCCC-CCCCCEECCCEEEEEE---CCCCCCCCEEEEEEECCCCEEEEE---ECCCC
Q ss_conf 7889-7896100031023430---698765748999994499899999---48983
Q 000316 1625 KSAD-EDGQHRLVPQKLYMVD---NGAKNLSVLSSISILPFSRLFLVG---TEDGY 1673 (1678)
Q Consensus 1625 ~~~~-~~g~~~~~~~kl~~~~---~g~~h~~~I~siafsPd~~lLatg---s~DG~ 1673 (1678)
.... ..+. ...+++... -..+|...+.+.+++|||+.|+++ |-|..
T Consensus 342 ~~~~~~~~~---~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~ 394 (441)
T d1qnia2 342 DAIKHYNGD---RVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRF 394 (441)
T ss_dssp HHHHHHTTC---CCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGS
T ss_pred HHHHHHCCC---CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 221332267---77656864532668987752454223898848996574442557
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.39 E-value=3.9e-11 Score=92.16 Aligned_cols=114 Identities=4% Similarity=-0.113 Sum_probs=83.8
Q ss_pred CCCCCCCCCEE--EECCCCCCCCCCEEEEEEC---------CCCEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEE
Q ss_conf 23467899168--1059999889986999919---------997999968984268941266647999991499989997
Q 000316 1277 SNLMKCEPWFW--FPTPAASWDGPDFLGRVGG---------LKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTA 1345 (1678)
Q Consensus 1277 ~~~~gH~~~V~--~fSpdg~~~~~~~LasgS~---------D~~v~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSg 1345 (1678)
.++.+|..+|. .|||||++ |+.++. ++++.+||+++..+..+.+|.+.+..+.|||||+.++..
T Consensus 55 ~~~~~~~~~i~~~~~SpDg~~-----i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~ 129 (470)
T d2bgra1 55 STFDEFGHSINDYSISPDGQF-----ILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV 129 (470)
T ss_dssp TTTTTSSSCCCEEEECTTSSE-----EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE
T ss_pred HHHHHCCCCCCEEEECCCCCE-----EEEEECCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 564431676540599898897-----999977710001046734999989888513124687423101014676413575
Q ss_pred ECCCCCCCEEEEEECCCCEEEEEEECC------------------CCCEEEEEECCCCCCEEEC--C-CCEEEEEC
Q ss_conf 217897775999969998388897137------------------8647798653999917827--9-95999979
Q 000316 1346 GIGPGFKGTVQKWELTRINCVSGYYGH------------------EEVVNDICVLSSSGRIASC--D-GTLHVWNS 1400 (1678)
Q Consensus 1346 s~d~~~DgtVrIWDl~tg~~l~tl~gH------------------~~~V~sI~fsp~~~~laS~--D-gtIkIWD~ 1400 (1678)
. |+.+.+|+..+++..+....+ .+....+.|+|++..++.. | ..|+.|+.
T Consensus 130 ~-----~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 130 W-----NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp E-----TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred E-----CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCEEEECCCCCCEEEE
T ss_conf 1-----4641379889994653210147774053543201121004776530799998722026863776706998
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.20 E-value=8.8e-12 Score=96.83 Aligned_cols=74 Identities=22% Similarity=0.245 Sum_probs=60.1
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHH----HHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 79951037999999999990-999999977466----652299998686899999999987132599999998888359
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAV----YLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~----~~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
.++.++||||+||++|||++ |++||.+.+... .......+..+...|+++++||.+||+.||++|||++|+++|
T Consensus 242 ~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 242 IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 9996330300039999998389999999898999999985699899887678999999999758896689399999999
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.14 E-value=3.4e-11 Score=92.59 Aligned_cols=75 Identities=20% Similarity=0.274 Sum_probs=62.1
Q ss_pred CCCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 379951037999999999990-99999997746665---2299998686899999999987132599999998888359
Q 000316 734 FSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 734 l~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
-.++.++||||+||++|||++ |.+||.+.+..... ..+..+..++.+|+.+++||.+||..||.+|||+.|++++
T Consensus 184 ~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 184 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp CCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 9988745244424789999826999988899999999998189998987779999999999768797689299999999
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.12 E-value=4.5e-11 Score=91.69 Aligned_cols=75 Identities=23% Similarity=0.336 Sum_probs=57.4
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH----HCCCC--CCCCCCCCHHHHHHHHHCCCCCCCCCC-CHHHHHC
Q ss_conf 7995103799999999999099999997746665----22999--986868999999999871325999999-9888835
Q 000316 735 SKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL----ENGDL--PGVMEELPSHTRILVEACITKDWTRRP-SAKSLLE 807 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g~plF~~~~~~~~~----~~~~~--~~~~~~~s~~~~dll~~lL~~dp~~R~-sa~e~L~ 807 (1678)
.++.++||||+||++|||++|++||.+.+..... ..... ....+.+|+.+++||.+||..||.+|+ ||+++ .
T Consensus 190 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~ 268 (277)
T d1o6ya_ 190 SVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM-R 268 (277)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-H
T ss_pred CCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHCHHHHHHH-H
T ss_conf 999663202652899999769799899699999999984699997100347899999999998667976777399999-9
Q ss_pred CCC
Q ss_conf 999
Q 000316 808 SPY 810 (1678)
Q Consensus 808 hp~ 810 (1678)
|+|
T Consensus 269 ~~l 271 (277)
T d1o6ya_ 269 ADL 271 (277)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 999
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.11 E-value=5.2e-11 Score=91.24 Aligned_cols=74 Identities=18% Similarity=0.251 Sum_probs=60.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHH----HHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 799510379999999999909-99999977466----652299998686899999999987132599999998888359
Q 000316 735 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAV----YLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g-~plF~~~~~~~----~~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
..+.++||||+||++|||+++ .+||.+..... ....+..+..+...++++++|+.+||..||++|||++|+++|
T Consensus 212 ~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 212 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 8996632213678999998688999989998999999996389888886578999999999767796679199999999
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=1.2e-10 Score=88.64 Aligned_cols=83 Identities=28% Similarity=0.339 Sum_probs=65.9
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC--C
Q ss_conf 799510379999999999909-9999997746665---229999868689999999998713259999999888835--9
Q 000316 735 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE--S 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g-~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~--h 808 (1678)
..+.++||||+||++|||++| +|+|.+....... ........++..++.+++|+.+||..||++|||++++++ +
T Consensus 190 ~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 269 (285)
T d1fmka3 190 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLE 269 (285)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 98917741323589999986899999888899999999826899998323799999999975669758919999999876
Q ss_pred CCCCCCCCC
Q ss_conf 999998447
Q 000316 809 PYFPSTVKS 817 (1678)
Q Consensus 809 p~F~~~~~~ 817 (1678)
+||.....+
T Consensus 270 ~~~~~~~p~ 278 (285)
T d1fmka3 270 DYFTSTEPQ 278 (285)
T ss_dssp TTTSCSCCC
T ss_pred HHHCCCCCC
T ss_conf 662389999
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=3.6e-11 Score=92.34 Aligned_cols=76 Identities=24% Similarity=0.367 Sum_probs=61.8
Q ss_pred CCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH---HCC
Q ss_conf 9951037999999999990-9999999774666---52299998686899999999987132599999998888---359
Q 000316 736 KDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSL---LES 808 (1678)
Q Consensus 736 ~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~---~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~---L~h 808 (1678)
.+.++||||+||++|||++ |++||.+.+.... +..+..+..+...|+++++|+.+||..||++|||++++ |+|
T Consensus 187 ~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~ 266 (277)
T d1xbba_ 187 FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 266 (277)
T ss_dssp EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHC
T ss_conf 98434430340313289658999999989999999998289999986567999999999758897689098999998528
Q ss_pred CCC
Q ss_conf 999
Q 000316 809 PYF 811 (1678)
Q Consensus 809 p~F 811 (1678)
+|+
T Consensus 267 ~~~ 269 (277)
T d1xbba_ 267 YYY 269 (277)
T ss_dssp HHH
T ss_pred HHH
T ss_conf 875
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=2.3e-11 Score=93.80 Aligned_cols=78 Identities=18% Similarity=0.332 Sum_probs=63.1
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHH---HC
Q ss_conf 79951037999999999990-9999999774666---52299998686899999999987132599999998888---35
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSL---LE 807 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~---~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~---L~ 807 (1678)
..+.++||||+||++|||++ |++||.+.+..+. +..+..+..++..|+++.+|+.+||..||++|||+.++ |+
T Consensus 188 ~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~ 267 (285)
T d1u59a_ 188 KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267 (285)
T ss_dssp EECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99954123220178999993899999997999999999818999999767899999999975779768909999999999
Q ss_pred CCCCC
Q ss_conf 99999
Q 000316 808 SPYFP 812 (1678)
Q Consensus 808 hp~F~ 812 (1678)
|+|+.
T Consensus 268 ~~~~~ 272 (285)
T d1u59a_ 268 ACYYS 272 (285)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99998
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.06 E-value=2.6e-10 Score=86.08 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=60.5
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 79951037999999999990-99999997746665---2299998686899999999987132599999998888359
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
.++.++||||+||++|||++ |++||.+.+..... .....+..+...++.+.+|+.+||..||++|||+.|++++
T Consensus 209 ~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 209 KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 978612144535789999867999999999999999997378899974226999999999758797689299999999
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.05 E-value=1.6e-10 Score=87.66 Aligned_cols=74 Identities=16% Similarity=0.193 Sum_probs=60.9
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 79951037999999999990-99999997746665---2299998686899999999987132599999998888359
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
..+.++||||+||++|||++ |++||.+.+..+.. ........+...++.+++|+.+||+.||.+|||++++|+|
T Consensus 177 ~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred CCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 988521033643246739755999988999999999998079789965465999999999766897689399999987
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=1.1e-10 Score=88.84 Aligned_cols=74 Identities=26% Similarity=0.296 Sum_probs=61.2
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 79951037999999999990-9999999774666---52299998686899999999987132599999998888359
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~---~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
..+.++||||+||++|||++ |++||.+.+..+. +..+..+.+++..++.+++|+++||..||.+|||+.+++++
T Consensus 176 ~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 176 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 888588777579999999978999999999999999998089999976579999999999756697689399999999
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.04 E-value=1.8e-10 Score=87.21 Aligned_cols=74 Identities=19% Similarity=0.292 Sum_probs=61.2
Q ss_pred CCCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 379951037999999999990-9999999774666---5229999868689999999998713259999999888835
Q 000316 734 FSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1678)
Q Consensus 734 l~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~---~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~ 807 (1678)
-.++.++||||+||++|||++ |.+||.+.+.... +..+..+..+..+++.+++||.+||+.||.+|||+.|+++
T Consensus 212 ~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 988825554775888887401798989999999999999728888987435299999999976679767939999999
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.03 E-value=1.4e-10 Score=88.11 Aligned_cols=75 Identities=20% Similarity=0.225 Sum_probs=61.9
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCC
Q ss_conf 79951037999999999990-9999999774666---522999986868999999999871325999999988883599
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESP 809 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~---~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~hp 809 (1678)
.++.++||||+||++|||++ |.+||.+.+.... +..+..+..++..++.+.+|+.+||..||.+|||+.|+++|.
T Consensus 189 ~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l 267 (317)
T d1xkka_ 189 IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 267 (317)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf 9983565440799999999779999999998999999975998999855689999999984789934691999999999
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.03 E-value=2.3e-10 Score=86.53 Aligned_cols=74 Identities=19% Similarity=0.242 Sum_probs=60.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 3799510379999999999909-9999997746665---229999868689999999998713259999999888835
Q 000316 734 FSKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1678)
Q Consensus 734 l~~~~~vDiWSlGcil~EL~~g-~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~ 807 (1678)
..++.++||||+||++|||+++ .|||.+....... .....+..+..+++++.+|+.+||..||++|||+.|+++
T Consensus 217 ~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 217 NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 889805630252362999980689999998999999999739978887325299999999974889657939999999
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.00 E-value=2.1e-10 Score=86.81 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=59.3
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHHH----CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 79951037999999999990-999999977466652----29999868689999999998713259999999888835
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYLE----NGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~~~----~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~ 807 (1678)
..+.++||||+||++|||++ |++||.+.+...... ....+..++.+|+.+++|+.+||..||++|||+.++++
T Consensus 190 ~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 190 TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp EEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 999421566148999999968999999969999999998479999985445399999999976889667929999999
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=3e-10 Score=85.67 Aligned_cols=74 Identities=18% Similarity=0.220 Sum_probs=59.5
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 79951037999999999990-99999997746665---2299998686899999999987132599999998888359
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
.++.++||||+||++|||++ |+|+|.+.+..... .....+..+...++++.+|+.+||+.||++|||++|+++|
T Consensus 178 ~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 998403321059999999878988877899999999998068889954367999999999765797689199999999
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.99 E-value=1e-10 Score=89.08 Aligned_cols=78 Identities=21% Similarity=0.294 Sum_probs=61.8
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC--C
Q ss_conf 79951037999999999990-99999997746665---229999868689999999998713259999999888835--9
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE--S 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~--h 808 (1678)
..+.++||||+||++|||++ |+|+|...+..... .....+..+...++++++|+.+||..||++|||++++++ +
T Consensus 186 ~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~ 265 (272)
T d1qpca_ 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (272)
T ss_dssp EECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99824564525799999996898888888999999999706888896557199999999975889768939999999861
Q ss_pred CCCC
Q ss_conf 9999
Q 000316 809 PYFP 812 (1678)
Q Consensus 809 p~F~ 812 (1678)
+||.
T Consensus 266 ~~ft 269 (272)
T d1qpca_ 266 DFFT 269 (272)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 1321
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.98 E-value=7.1e-07 Score=61.05 Aligned_cols=271 Identities=6% Similarity=-0.051 Sum_probs=149.1
Q ss_pred CCCCCCCEEE--ECCCCCCCCCCEEEEEECCCCEEEEECC-CCEEEEEC-CCCCCEEEEEEECCCC--EEEEEECCC---
Q ss_conf 4678991681--0599998899869999199979999689-84268941-2666479999914999--899972178---
Q 000316 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIR-AHHGALRSVAVGQDEC--TVFTAGIGP--- 1349 (1678)
Q Consensus 1279 ~~gH~~~V~~--fSpdg~~~~~~~LasgS~D~~v~lWd~~-g~~l~tl~-gH~~~V~svafspdg~--~LaSgs~d~--- 1349 (1678)
...|.+.... ++|||+| +++....+.++.+||++ .++.+.+. .+......++|+++++ +++..+.+.
T Consensus 67 gd~hhP~~s~t~gtpDGr~----lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~ 142 (441)
T d1qnia2 67 GDCHHPHISMTDGRYDGKY----LFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQ 142 (441)
T ss_dssp CCBCCCEEEEETTEEEEEE----EEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEES
T ss_pred CCCCCCCCCEECCCCCCCE----EEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCC
T ss_conf 7556777221032688888----999738999799998877847557956788786434870569989999566775443
Q ss_pred ----------CCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE-EEC-C-CCEEEEECCCCCEEEEECCCCCCC
Q ss_conf ----------977759999699983888971378647798653999917-827-9-959999799994569960467665
Q 000316 1350 ----------GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC-D-GTLHVWNSQTGKLLSVFAEQSMDS 1416 (1678)
Q Consensus 1350 ----------~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l-aS~-D-gtIkIWD~~tg~~i~~l~~~~~~~ 1416 (1678)
.....+..+|..+.+...+.... +....+.|+++++++ +++ + ..+..++..+......+....
T Consensus 143 ~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n--- 218 (441)
T d1qnia2 143 PNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFN--- 218 (441)
T ss_dssp SCSSSCCCGGGEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEE---
T ss_pred CCCCCCCCCCCCCCEEEEECCCCCEEEEEEECC-CCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECC---
T ss_conf 676630014555323886637556064787369-9865469879999899985178731898515712178999688---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCC
Q ss_conf 56689998753334554443345777778378631598306767614997999997899199998889903588617997
Q 000316 1417 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496 (1678)
Q Consensus 1417 ~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~ 1496 (1678)
.-...++.++|+++.. +.++.+.+++......+..+.....
T Consensus 219 --------------------------------------~p~~~~~~~dGk~~~v-~~~~v~vvd~~~~~~v~~~IPvgks 259 (441)
T d1qnia2 219 --------------------------------------VERIAAAVKAGNFKTI-GDSKVPVVDGRGESEFTRYIPVPKN 259 (441)
T ss_dssp --------------------------------------HHHHHHHHHTTCCBCC-TTCCCCEEECSSSCSSEEEECCBSS
T ss_pred --------------------------------------CCCEEEEECCCCEEEE-CCCCCEEEECCCCCCEEEEEECCCC
T ss_conf --------------------------------------5110799669999996-9998289980368706899717988
Q ss_pred CCCCCCCCEEEEEECCCCCCCCCCCCCCCEE-EEEECCCEEEEEECCCCCE--------EEEEECCC---CCEEEEE-CC
Q ss_conf 5567875107875089754458655799889-9994099299996899929--------99993158---8769998-08
Q 000316 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWI-AAGLSSGQCRLFDVRSGNV--------IASWRAHD---GYVTKLA-AP 1563 (1678)
Q Consensus 1497 ~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~L-asGs~Dg~I~iWD~rtg~~--------i~~l~gH~---~~V~sIa-sp 1563 (1678)
...++++ |+|+++ ++|..+++|.+||+.+... ..++.++. -.....+ .+
T Consensus 260 -------PhGv~vS-----------PDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~ 321 (441)
T d1qnia2 260 -------PHGLNTS-----------PDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDG 321 (441)
T ss_dssp -------CCCEEEC-----------TTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECS
T ss_pred -------CCCCEEC-----------CCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCEECC
T ss_conf -------6672689-----------9987899907759938999832244575256884247996014554766522657
Q ss_pred CCCEEEEEECCCCEEEEECCCC-------CCC-CCEEE-----ECCCCCEE--EEEECCCEEEEEE
Q ss_conf 9999999959993999986999-------988-87695-----05899889--9975299999994
Q 000316 1564 EDHLLVSSSLDKTLRIWDLRRN-------WPS-QPTVF-----KGHTNGIS--GFSVWGQDVISIS 1614 (1678)
Q Consensus 1564 dg~~LaSgS~DgtI~IWDl~~~-------~~~-~~~~l-----~gH~~~V~--afSpdg~~LaSgs 1614 (1678)
+|..+.|.+.|..|..|++... ... ....+ .||...+. +++|||++|++++
T Consensus 322 ~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~ 387 (441)
T d1qnia2 322 RGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387 (441)
T ss_dssp SSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEE
T ss_pred CCEEEECCCCCCEEEEECCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 855998524431689723542213322677765686453266898775245422389884899657
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.98 E-value=2.8e-10 Score=85.86 Aligned_cols=75 Identities=25% Similarity=0.255 Sum_probs=58.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCCC-CCC---HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 379951037999999999990999999-977---466652299998686899999999987132599999998888359
Q 000316 734 FSKDCSKDIFSIGCLLAELHLRRPLFD-SIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 734 l~~~~~vDiWSlGcil~EL~~g~plF~-~~~---~~~~~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
-..+.++||||+||+++||++|..||. ..+ ....+..+..+..++..++.+.+|+.+||..||++||++.|+++|
T Consensus 209 ~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 209 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 7999745746619999999978999988899999999998089889964475999999999768897689399999999
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.97 E-value=5.6e-10 Score=83.70 Aligned_cols=73 Identities=23% Similarity=0.277 Sum_probs=58.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 799510379999999999909-999999774666---5229999868689999999998713259999999888835
Q 000316 735 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g-~plF~~~~~~~~---~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~ 807 (1678)
.++.++||||+||++|||+++ .|+|.+.+.... ......+..+...++.+++|+.+||..||++|||++|+++
T Consensus 192 ~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 192 KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 99810430217899999986799887742599999998558888887433099999999975779768939999999
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=3.2e-10 Score=85.43 Aligned_cols=74 Identities=20% Similarity=0.177 Sum_probs=60.7
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCC
Q ss_conf 799510379999999999909-9999997746665---2299998686899999999987132599999998888359
Q 000316 735 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g-~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~h 808 (1678)
.++.++||||+||+++||++| .+||.+.+..... ..+..+..+..+++++++||.+||..||++|||++|++++
T Consensus 202 ~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 202 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp EECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 999622153138899999836899999999999999998268888876678999999999767896689499999999
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.96 E-value=6.6e-10 Score=83.15 Aligned_cols=73 Identities=19% Similarity=0.301 Sum_probs=58.8
Q ss_pred CCCCCCHHHHHHHHHHHHHC-CCCCCCCCCHHH----HHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 79951037999999999990-999999977466----65229999868689999999998713259999999888835
Q 000316 735 SKDCSKDIFSIGCLLAELHL-RRPLFDSISLAV----YLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~-g~plF~~~~~~~----~~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~ 807 (1678)
..+.++||||+||+++||++ |.|+|.+..... ....+..+..+...++.+++||.+||..||++|||+.|+++
T Consensus 223 ~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 223 VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 999740010258999999858998877899899999998668988985436599999999975779657929999999
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.92 E-value=1.2e-09 Score=81.39 Aligned_cols=73 Identities=21% Similarity=0.258 Sum_probs=61.2
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHHH---HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 799510379999999999909-9999997746665---229999868689999999998713259999999888835
Q 000316 735 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g-~plF~~~~~~~~~---~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~ 807 (1678)
..+.++||||+||+++||+++ ++||.+.+..... ..+..+..++.+++.+.++|.+|++.||.+|||+.++++
T Consensus 211 ~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 211 VFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287 (308)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 98833344437899999996899999998999999999808888886335399999999975779658939999999
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.90 E-value=2.2e-09 Score=79.29 Aligned_cols=73 Identities=18% Similarity=0.253 Sum_probs=57.3
Q ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCCCCCCHHHH---HHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHC
Q ss_conf 799510379999999999909-999999774666---5229999868689999999998713259999999888835
Q 000316 735 SKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g-~plF~~~~~~~~---~~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e~L~ 807 (1678)
..+.++||||+||++|||+++ .|+|.+.+.... +..+..+..+...++.+++|+.+||..||.+|||+.|+++
T Consensus 189 ~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 189 KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 99973556344898999996798865568999999998635789985045799999999977679768939999999
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.78 E-value=2e-09 Score=79.61 Aligned_cols=78 Identities=15% Similarity=0.272 Sum_probs=58.6
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH-------H---CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHH-
Q ss_conf 7995103799999999999099999997746665-------2---2999986868999999999871325999999988-
Q 000316 735 SKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL-------E---NGDLPGVMEELPSHTRILVEACITKDWTRRPSAK- 803 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g~plF~~~~~~~~~-------~---~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~- 803 (1678)
..+.++||||+||+++||++|++||.+....... . ..+.+...+.+|+++.+++.+|+..||.+||++.
T Consensus 189 ~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~ 268 (299)
T d1ckia_ 189 EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSY 268 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHH
T ss_pred CCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf 98983218861778999984987665530577999999852356789835753478899999999984399557919999
Q ss_pred --HHHCCCCCC
Q ss_conf --883599999
Q 000316 804 --SLLESPYFP 812 (1678)
Q Consensus 804 --e~L~hp~F~ 812 (1678)
++|+|+|..
T Consensus 269 i~~~l~~~~~~ 279 (299)
T d1ckia_ 269 LRQLFRNLFHR 279 (299)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
T ss_conf 99999999997
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=3.4e-08 Score=70.66 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=49.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCHH--------------H----HHHCCCC-CCCCC-----CCCHHHHHHHHHC
Q ss_conf 995103799999999999099999997746--------------6----6522999-98686-----8999999999871
Q 000316 736 KDCSKDIFSIGCLLAELHLRRPLFDSISLA--------------V----YLENGDL-PGVME-----ELPSHTRILVEAC 791 (1678)
Q Consensus 736 ~~~~vDiWSlGcil~EL~~g~plF~~~~~~--------------~----~~~~~~~-~~~~~-----~~s~~~~dll~~l 791 (1678)
.+.++||||+||++|||++|.+||...... . ....... +.++. .....+.+|+.+|
T Consensus 195 ~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~c 274 (303)
T d1vjya_ 195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMREC 274 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 67501220159999999628998876631124101225564309999998750246888776557768999999999997
Q ss_pred CCCCCCCCCCHHHHHCC
Q ss_conf 32599999998888359
Q 000316 792 ITKDWTRRPSAKSLLES 808 (1678)
Q Consensus 792 L~~dp~~R~sa~e~L~h 808 (1678)
|+.||++|||+.|++++
T Consensus 275 l~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 275 WYANGAARLTALRIKKT 291 (303)
T ss_dssp CCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHCCCHHHHHHH
T ss_conf 60698589599999999
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.47 E-value=4.3e-05 Score=48.09 Aligned_cols=71 Identities=8% Similarity=-0.055 Sum_probs=35.3
Q ss_pred EEECCCCCCCCCCEEEEE---------ECCCCEEEEECCCCEEEEEC---CCCCCEEEEEEECCCCEEEEEECCCCCCCE
Q ss_conf 810599998899869999---------19997999968984268941---266647999991499989997217897775
Q 000316 1287 WFPTPAASWDGPDFLGRV---------GGLKDESPWKIKASILSSIR---AHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1678)
Q Consensus 1287 ~~fSpdg~~~~~~~Lasg---------S~D~~v~lWd~~g~~l~tl~---gH~~~V~svafspdg~~LaSgs~d~~~Dgt 1354 (1678)
+.+||||.+ ++.+ |..+...++|+.......+. +..+.+....|||||+.+|-.. ++.
T Consensus 66 ~~~SpD~~~-----vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-----~~n 135 (465)
T d1xfda1 66 YEISPDREY-----ALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-----ENN 135 (465)
T ss_dssp EEECTTSSE-----EEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-----TTE
T ss_pred EEECCCCCE-----EEEEECCCCEEEEECCCCEEEEECCCCCEEECCCCCCCCCCCCEEEECCCCCEEEEEE-----CCE
T ss_conf 389898886-----9999845100476033528999856884564157667764311002426785699996-----132
Q ss_pred EEEEECCCCEEEE
Q ss_conf 9999699983888
Q 000316 1355 VQKWELTRINCVS 1367 (1678)
Q Consensus 1355 VrIWDl~tg~~l~ 1367 (1678)
+.+.+..++...+
T Consensus 136 l~~~~~~~~~~~~ 148 (465)
T d1xfda1 136 IYYCAHVGKQAIR 148 (465)
T ss_dssp EEEESSSSSCCEE
T ss_pred EEEEECCCCCEEE
T ss_conf 9999548996589
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=98.46 E-value=7.4e-08 Score=68.20 Aligned_cols=72 Identities=10% Similarity=0.136 Sum_probs=54.8
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHH------H----HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHH
Q ss_conf 799510379999999999909999999774666------5----229999868689999999998713259999999888
Q 000316 735 SKDCSKDIFSIGCLLAELHLRRPLFDSISLAVY------L----ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKS 804 (1678)
Q Consensus 735 ~~~~~vDiWSlGcil~EL~~g~plF~~~~~~~~------~----~~~~~~~~~~~~s~~~~dll~~lL~~dp~~R~sa~e 804 (1678)
..+.++||||+||+++||++|++||.+...... + .....+.+.+.+|+++.+++..|+..+|.+||+.+.
T Consensus 189 ~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~ 268 (293)
T d1csna_ 189 EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDY 268 (293)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 88869998983199999986987678853021999999997056799958965799899999999984399300859999
Q ss_pred HH
Q ss_conf 83
Q 000316 805 LL 806 (1678)
Q Consensus 805 ~L 806 (1678)
+.
T Consensus 269 l~ 270 (293)
T d1csna_ 269 LQ 270 (293)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.46 E-value=4.6e-05 Score=47.85 Aligned_cols=146 Identities=9% Similarity=-0.089 Sum_probs=68.1
Q ss_pred EEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEE
Q ss_conf 67676149979999978991999988899035886179975567875107875089754458655799889999409929
Q 000316 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1678)
Q Consensus 1457 t~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I 1536 (1678)
..+++.++++.+++-..+..+..++...... ..... . -......+++. ++++++++...++.|
T Consensus 101 ~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~-~~~~~-~----~~~~p~~i~~~-----------~~g~~~v~~~~~~~i 163 (260)
T d1rwia_ 101 EGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-TVLPF-T----GLNDPDGVAVD-----------NSGNVYVTDTDNNRV 163 (260)
T ss_dssp EEEEECTTCCEEEEEGGGTEEEEECTTCSSC-EECCC-C----SCCSCCEEEEC-----------TTCCEEEEEGGGTEE
T ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCCCCEE-EEEEE-C----CCCCCCEEEEC-----------CCCCEEEECCCCCCC
T ss_conf 0002455320575033555321123222201-22320-3----66775205454-----------899886410256433
Q ss_pred EEEECCCCCEEEEEECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEE-CCCCCEE--EEEECCCEEEE
Q ss_conf 9996899929999931588769998-089999999959993999986999988876950-5899889--99752999999
Q 000316 1537 RLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFK-GHTNGIS--GFSVWGQDVIS 1612 (1678)
Q Consensus 1537 ~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~-gH~~~V~--afSpdg~~LaS 1612 (1678)
..+|.............-.....++ .++|+++++....+.|..++..... ...+. ..-.... +++++|..+++
T Consensus 164 ~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~---~~~~~~~~~~~P~~i~~d~~g~l~va 240 (260)
T d1rwia_ 164 VKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT---STVLPFTGLNTPLAVAVDSDRTVYVA 240 (260)
T ss_dssp EEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC---CEECCCCSCCCEEEEEECTTCCEEEE
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCE---EEEECCCCCCCEEEEEEECCCCEEEE
T ss_conf 222343100122210114787631231000134321489989999699976---99970699898179999089999999
Q ss_pred EECCC-EEEEE
Q ss_conf 94897-59995
Q 000316 1613 ISNNK-IGLSS 1622 (1678)
Q Consensus 1613 gs~D~-I~iwd 1622 (1678)
-..++ |+..+
T Consensus 241 d~~~~rI~~i~ 251 (260)
T d1rwia_ 241 DRGNDRVVKLT 251 (260)
T ss_dssp EGGGTEEEEEC
T ss_pred ECCCCEEEEEE
T ss_conf 79999899995
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.44 E-value=5.1e-05 Score=47.49 Aligned_cols=107 Identities=10% Similarity=0.048 Sum_probs=49.9
Q ss_pred EECCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCC--EE
Q ss_conf 1059999889986999919997999968984268941266647999991499989997217897775999969998--38
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI--NC 1365 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg--~~ 1365 (1678)
+++|||.+ +++...+++|..|+..+.. ..+....+.+.+++|++||+.+++... ++.+..|+.... ..
T Consensus 34 Av~pdG~l-----~vt~~~~~~I~~i~p~g~~-~~~~~~~~~~~gla~~~dG~l~v~~~~----~~~~~~~~~~~~~~~~ 103 (302)
T d2p4oa1 34 ASAPDGTI-----FVTNHEVGEIVSITPDGNQ-QIHATVEGKVSGLAFTSNGDLVATGWN----ADSIPVVSLVKSDGTV 103 (302)
T ss_dssp EECTTSCE-----EEEETTTTEEEEECTTCCE-EEEEECSSEEEEEEECTTSCEEEEEEC----TTSCEEEEEECTTSCE
T ss_pred EECCCCCE-----EEEECCCCEEEEEECCCCE-EEEECCCCCCCEEEECCCCCEEEEECC----CCEEEEEEECCCCCCE
T ss_conf 79999889-----9996889989999089988-999717998536898677886998328----9537888710111101
Q ss_pred EEEE-ECCCCCEEEEEECCCCCCEEEC--CCCEEEEECCCCC
Q ss_conf 8897-1378647798653999917827--9959999799994
Q 000316 1366 VSGY-YGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGK 1404 (1678)
Q Consensus 1366 l~tl-~gH~~~V~sI~fsp~~~~laS~--DgtIkIWD~~tg~ 1404 (1678)
.... .......+.+++.+++..+++. ++.+..+|...+.
T Consensus 104 ~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~ 145 (302)
T d2p4oa1 104 ETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS 145 (302)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred EECCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCCCC
T ss_conf 210235786322166771579787503565541024216873
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.42 E-value=5.6e-05 Score=47.20 Aligned_cols=278 Identities=5% Similarity=-0.068 Sum_probs=135.8
Q ss_pred ECCCCEEEEEC--CCCEE---EE-ECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCC-CEEEEEE-ECCCCCE
Q ss_conf 19997999968--98426---89-4126664799999149998999721789777599996999-8388897-1378647
Q 000316 1305 GGLKDESPWKI--KASIL---SS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR-INCVSGY-YGHEEVV 1376 (1678)
Q Consensus 1305 S~D~~v~lWd~--~g~~l---~t-l~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~t-g~~l~tl-~gH~~~V 1376 (1678)
+.++.+..+.+ +...+ .. .......+..++|+++++.++++.. +.+..|.+.. +...... .......
T Consensus 11 t~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~p 85 (365)
T d1jofa_ 11 TPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-----KKWSSFAVKSPTEIVHEASHPIGGHP 85 (365)
T ss_dssp SSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-----TEEEEEEEEETTEEEEEEEEECCSSG
T ss_pred CCCCCEEEEEECCCCCEEEEEEEEECCCCCCCCEEEECCCCCEEEEEEC-----CCEEEEEEECCCCEEEEEEECCCCCC
T ss_conf 4999899999858889389845445168999777999489899999938-----94789999089976987641289986
Q ss_pred EEEEECCCCCC--EEEC---CCCEEEEECCC-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 79865399991--7827---99599997999-945699604676655668999875333455444334577777837863
Q 000316 1377 NDICVLSSSGR--IASC---DGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTA 1450 (1678)
Q Consensus 1377 ~sI~fsp~~~~--laS~---DgtIkIWD~~t-g~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~ 1450 (1678)
..+.+++++.. +++. .++|..+.... +.....+...... .+.+.+....
T Consensus 86 ~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~ 140 (365)
T d1jofa_ 86 RANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETG-------------------------KLEKNVQNYE 140 (365)
T ss_dssp GGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTC-------------------------CEEEEEEEEE
T ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEEEECC-------------------------EECCCCCCCC
T ss_conf 789987899879999932799789986745788742068664033-------------------------0047646755
Q ss_pred E-CCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE-
Q ss_conf 1-5983067676149979999978-991999988899035886179975567875107875089754458655799889-
Q 000316 1451 F-DGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI- 1527 (1678)
Q Consensus 1451 f-~~~~vt~ia~sp~g~~Lvsgs~-DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~L- 1527 (1678)
. ......++.++|++++++++.. ...|.+|+......+....... ........+.++|. |+++++
T Consensus 141 ~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~-~~~~g~gPr~i~f~-----------pdg~~~y 208 (365)
T d1jofa_ 141 YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD-APDPGDHPRWVAMH-----------PTGNYLY 208 (365)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE-CSSTTCCEEEEEEC-----------TTSSEEE
T ss_pred CCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCEEECCCEE-ECCCCCCEEEEEEC-----------CCCCEEE
T ss_conf 68898115978889999899820799879999706887166525111-12788740899988-----------9986699
Q ss_pred EEEECCCEEEEEECCCCC--EEEEEEC-----------------CCCCEEEEE-CCCCCEEEEEEC-CC-----CEEEEE
Q ss_conf 999409929999689992--9999931-----------------588769998-089999999959-99-----399998
Q 000316 1528 AAGLSSGQCRLFDVRSGN--VIASWRA-----------------HDGYVTKLA-APEDHLLVSSSL-DK-----TLRIWD 1581 (1678)
Q Consensus 1528 asGs~Dg~I~iWD~rtg~--~i~~l~g-----------------H~~~V~sIa-spdg~~LaSgS~-Dg-----tI~IWD 1581 (1678)
+++..++.|.+||...++ .+..... +......+. +|+|++|+++.. +. .|..|+
T Consensus 209 v~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~ 288 (365)
T d1jofa_ 209 ALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFK 288 (365)
T ss_dssp EEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEE
T ss_pred EECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEEEE
T ss_conf 95158998999995598753778731240245565566654444357763169989999789971357875422799998
Q ss_pred CCCCCCCCCE-EE-E--CCCCCE--EEEEE-CCCEEEEEE-CCC-EEEEECC
Q ss_conf 6999988876-95-0--589988--99975-299999994-897-5999567
Q 000316 1582 LRRNWPSQPT-VF-K--GHTNGI--SGFSV-WGQDVISIS-NNK-IGLSSLS 1624 (1678)
Q Consensus 1582 l~~~~~~~~~-~l-~--gH~~~V--~afSp-dg~~LaSgs-~D~-I~iwdl~ 1624 (1678)
+......... .+ . ...... .+++| +|++|+.+. .++ |.+|+++
T Consensus 289 ~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~ 340 (365)
T d1jofa_ 289 LRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp ECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred ECCCCCEEEEEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEEE
T ss_conf 5688714467676677767998647896489999999996799949999982
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.39 E-value=6.6e-05 Score=46.70 Aligned_cols=239 Identities=12% Similarity=0.045 Sum_probs=131.3
Q ss_pred EEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEE--CCCCEE
Q ss_conf 268941266647999991499989997217897775999969998388897137864779865399991782--799599
Q 000316 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS--CDGTLH 1396 (1678)
Q Consensus 1319 ~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS--~DgtIk 1396 (1678)
.+.++.. ...+..+++++||+++++... +++|..|+... +. ..+......+.+++|.+++..+++ .++.+.
T Consensus 20 v~~~~p~-~~~~e~iAv~pdG~l~vt~~~----~~~I~~i~p~g-~~-~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~ 92 (302)
T d2p4oa1 20 IITSFPV-NTFLENLASAPDGTIFVTNHE----VGEIVSITPDG-NQ-QIHATVEGKVSGLAFTSNGDLVATGWNADSIP 92 (302)
T ss_dssp EEEEECT-TCCEEEEEECTTSCEEEEETT----TTEEEEECTTC-CE-EEEEECSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred EEEECCC-CCCCCCEEECCCCCEEEEECC----CCEEEEEECCC-CE-EEEECCCCCCCEEEECCCCCEEEEECCCCEEE
T ss_conf 7888889-988478779999889999688----99899990899-88-99971799853689867788699832895378
Q ss_pred EEECCCCCE-EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 997999945-6996046766556689998753334554443345777778378631598306767614997999997899
Q 000316 1397 VWNSQTGKL-LSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1678)
Q Consensus 1397 IWD~~tg~~-i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~Dg 1475 (1678)
.|+...... ...+.... .......+.+.+++..+++.+.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~n~i~~~~~g~~~v~~~~~~ 134 (302)
T d2p4oa1 93 VVSLVKSDGTVETLLTLP--------------------------------------DAIFLNGITPLSDTQYLTADSYRG 134 (302)
T ss_dssp EEEEECTTSCEEEEEECT--------------------------------------TCSCEEEEEESSSSEEEEEETTTT
T ss_pred EEEECCCCCCEEECCCCC--------------------------------------CCCCCCEEEECCCCCEEEECCCCC
T ss_conf 887101111012102357--------------------------------------863221667715797875035655
Q ss_pred CEEEEECCCCEEEEEEECCC-CC---CCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEE---E
Q ss_conf 19999888990358861799-75---56787510787508975445865579988999940992999968999299---9
Q 000316 1476 SLRFIDINQGQKLHLWRGEP-TE---LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVI---A 1548 (1678)
Q Consensus 1476 tIkiWDl~tg~~i~~l~~~~-~~---v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i---~ 1548 (1678)
.+..+|...+.......... .. .........+.+. .+.++++.+..+.|+.+|....... .
T Consensus 135 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~------------~~~l~~~~~~~~~i~~~~~~~~~~~~~~~ 202 (302)
T d2p4oa1 135 AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF------------GNFLYVSNTEKMLLLRIPVDSTDKPGEPE 202 (302)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE------------TTEEEEEETTTTEEEEEEBCTTSCBCCCE
T ss_pred CCEEEECCCCCCEEEECCCCCCEEECCCCCCCCCCCCCC------------CCCEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 410242168730367518864014315763224320116------------98304403788769863443333234531
Q ss_pred EEECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEE--EE---EECCCEEEEEECC
Q ss_conf 9931588769998-0899999999599939999869999888769505899889--99---7529999999489
Q 000316 1549 SWRAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGIS--GF---SVWGQDVISISNN 1616 (1678)
Q Consensus 1549 ~l~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~--af---Spdg~~LaSgs~D 1616 (1678)
.+. .......++ .++|+++++...+++|..++..... ..+......-...+ +| ++|++.|..++..
T Consensus 203 ~~~-~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~-~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~~ 274 (302)
T d2p4oa1 203 IFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRST-TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 274 (302)
T ss_dssp EEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCE-EEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCC-CCCCCCCEEECCCCCEEEEECCCCCEEEECCCCCE-EEEEECCCCCCCCEEEEECCCCCCCCEEEEECCC
T ss_conf 015-89987523787999999997489918998789978-9999637898882489970878878989999889
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.32 E-value=9.5e-05 Score=45.55 Aligned_cols=106 Identities=7% Similarity=-0.062 Sum_probs=43.8
Q ss_pred EEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf 67614997999997899199998889903588617997556787510787508975445865579988999940992999
Q 000316 1459 LHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRL 1538 (1678)
Q Consensus 1459 ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~i 1538 (1678)
+++.++++.+++...++.|..+|....... .+... .......+++. ++|+++++....+.|..
T Consensus 145 i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~-~~~~~-----~~~~p~gi~~d-----------~~g~l~vsd~~~~~i~~ 207 (260)
T d1rwia_ 145 VAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFT-----DITAPWGIAVD-----------EAGTVYVTEHNTNQVVK 207 (260)
T ss_dssp EEECTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCS-----SCCSEEEEEEC-----------TTCCEEEEETTTTEEEE
T ss_pred EEECCCCCEEEECCCCCCCCCCCCCCCEEE-EEECC-----CCCCCCCCEEE-----------EEEEEEEEECCCCEEEE
T ss_conf 545489988641025643322234310012-22101-----14787631231-----------00013432148998999
Q ss_pred EECCCCCEEEEEE-CCCCCEEEEE-CCCCCEEEEEECCCCEEEEEC
Q ss_conf 9689992999993-1588769998-089999999959993999986
Q 000316 1539 FDVRSGNVIASWR-AHDGYVTKLA-APEDHLLVSSSLDKTLRIWDL 1582 (1678)
Q Consensus 1539 WD~rtg~~i~~l~-gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl 1582 (1678)
++...... ..+. ..-.....++ .++|.++++-..++.|+..+.
T Consensus 208 ~~~~~~~~-~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i~~ 252 (260)
T d1rwia_ 208 LLAGSTTS-TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTS 252 (260)
T ss_dssp ECTTCSCC-EECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEECC
T ss_pred EECCCCEE-EEECCCCCCCEEEEEEECCCCEEEEECCCCEEEEEEC
T ss_conf 96999769-9970699898179999089999999799998999959
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.20 E-value=0.00017 Score=43.70 Aligned_cols=105 Identities=11% Similarity=0.151 Sum_probs=45.2
Q ss_pred EEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEE
Q ss_conf 76149979999978991999988899035886179975567875107875089754458655799889999409929999
Q 000316 1460 HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1539 (1678)
Q Consensus 1460 a~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iW 1539 (1678)
++.+++..+++....+.+.+++. .++.+..+.... .......+++. ++++.+++....+.|++|
T Consensus 120 avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~----~~~~~~~i~~d-----------~~g~i~v~d~~~~~V~~~ 183 (279)
T d1q7fa_ 120 TVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSK----HLEFPNGVVVN-----------DKQEIFISDNRAHCVKVF 183 (279)
T ss_dssp EECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTT----TCSSEEEEEEC-----------SSSEEEEEEGGGTEEEEE
T ss_pred CCCCCCCEEEEEECCCEEEEECC-CCCEEECCCCCC----CCCCCCEEEEC-----------CCEEEEEEECCCCCEEEE
T ss_conf 00147847999632632567626-875010022001----02566243201-----------200178620135510023
Q ss_pred ECCCCCEEEEEE--CCCCCEEEEE-CCCCCEEEEEEC-CCCEEEEE
Q ss_conf 689992999993--1588769998-089999999959-99399998
Q 000316 1540 DVRSGNVIASWR--AHDGYVTKLA-APEDHLLVSSSL-DKTLRIWD 1581 (1678)
Q Consensus 1540 D~rtg~~i~~l~--gH~~~V~sIa-spdg~~LaSgS~-DgtI~IWD 1581 (1678)
|. +|+.+.++. +.......++ .++|+++++-+. ++.|.+++
T Consensus 184 d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~ 228 (279)
T d1q7fa_ 184 NY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT 228 (279)
T ss_dssp ET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC
T ss_pred EC-CCCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEC
T ss_conf 04-7944453011321148762323147869999789980899999
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.19 E-value=0.00017 Score=43.65 Aligned_cols=29 Identities=14% Similarity=0.300 Sum_probs=14.7
Q ss_pred CEEEEE-CC-CCCEEEEE-ECCCCEEEEECCC
Q ss_conf 769998-08-99999999-5999399998699
Q 000316 1556 YVTKLA-AP-EDHLLVSS-SLDKTLRIWDLRR 1584 (1678)
Q Consensus 1556 ~V~sIa-sp-dg~~LaSg-S~DgtI~IWDl~~ 1584 (1678)
..+.++ +| +|++|+.+ ..+++|.+|++..
T Consensus 310 ~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~ 341 (365)
T d1jofa_ 310 HSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CCCEEEECCCCCCEEEEEECCCCEEEEEEEEC
T ss_conf 86478964899999999967999499999828
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.14 E-value=0.00022 Score=42.85 Aligned_cols=232 Identities=12% Similarity=0.089 Sum_probs=116.2
Q ss_pred EECCCCCCCCCCEEEEEECCCCEEEEECCCCEEEEECC------CCCCEEEEEEECCC-CEEEEEECCCCCCCEEEEEEC
Q ss_conf 10599998899869999199979999689842689412------66647999991499-989997217897775999969
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRA------HHGALRSVAVGQDE-CTVFTAGIGPGFKGTVQKWEL 1360 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~g~~l~tl~g------H~~~V~svafspdg-~~LaSgs~d~~~DgtVrIWDl 1360 (1678)
+++++|.. +++-...+.|++|+.+|..+..+.. ....-..+++..+. ..+++... .++.|..++.
T Consensus 29 avd~dg~i-----~VaD~~n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~i~~~~~ 100 (279)
T d1q7fa_ 29 AVNAQNDI-----IVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS---PTHQIQIYNQ 100 (279)
T ss_dssp EECTTCCE-----EEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG---GGCEEEEECT
T ss_pred EECCCCCE-----EEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC---CCCCCCCCCC
T ss_conf 99499989-----999799898999969999999816657886642266300012344552000047---7531000002
Q ss_pred CCCEEEEEEE-CCCCCEEEEEECCCCCCE-EEC-CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9983888971-378647798653999917-827-9959999799994569960467665566899987533345544433
Q 000316 1361 TRINCVSGYY-GHEEVVNDICVLSSSGRI-ASC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1437 (1678)
Q Consensus 1361 ~tg~~l~tl~-gH~~~V~sI~fsp~~~~l-aS~-DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~ 1437 (1678)
+++....+. .......++++.+++..+ +.. .+.+.+++. +++.+..+....
T Consensus 101 -~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~-~g~~~~~~g~~~------------------------ 154 (279)
T d1q7fa_ 101 -YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSK------------------------ 154 (279)
T ss_dssp -TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTT------------------------
T ss_pred -CCCCEEECCCCCCCCCCEECCCCCCCEEEEEECCCEEEEECC-CCCEEECCCCCC------------------------
T ss_conf -563024038886425420000147847999632632567626-875010022001------------------------
Q ss_pred CCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 45777778378631598306767614997999997899199998889903588617997556787510787508975445
Q 000316 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1678)
Q Consensus 1438 ~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~DgtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~ 1517 (1678)
.. .....+++.++++.+++....+.|+++|. +++.+.++... +.......+|+.
T Consensus 155 ----~~----------~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~----g~~~~P~giavD------- 208 (279)
T d1q7fa_ 155 ----HL----------EFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGE----GITNYPIGVGIN------- 208 (279)
T ss_dssp ----TC----------SSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCT----TTSCSEEEEEEC-------
T ss_pred ----CC----------CCCCEEEECCCEEEEEEECCCCCEEEEEC-CCCEEEEECCC----CCCCCCCCCCCC-------
T ss_conf ----02----------56624320120017862013551002304-79444530113----211487623231-------
Q ss_pred CCCCCCCCEEEEEEC-CCEEEEEECCCCCEEEEEECCC--CCEEEEE-CCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 865579988999940-9929999689992999993158--8769998-089999999959993999986999
Q 000316 1518 GGAVASPSWIAAGLS-SGQCRLFDVRSGNVIASWRAHD--GYVTKLA-APEDHLLVSSSLDKTLRIWDLRRN 1585 (1678)
Q Consensus 1518 dg~~p~g~~LasGs~-Dg~I~iWD~rtg~~i~~l~gH~--~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~ 1585 (1678)
++|+++++-.. ++.|.+|+. +|+.+..+.... .....|+ .++|.++++ +.++.|++|.....
T Consensus 209 ----~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~-~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 209 ----SNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 274 (279)
T ss_dssp ----TTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ----CCCEEEEEECCCCCEEEEECC-CCCEEEEEECCCCCCCEEEEEEECCCCEEEE-ECCCEEEEEEEEEE
T ss_conf ----478699997899808999999-9999999968888898837999089919999-18996999872203
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.02 E-value=3.9e-05 Score=48.37 Aligned_cols=140 Identities=14% Similarity=0.023 Sum_probs=83.8
Q ss_pred CCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC-CCCCCC
Q ss_conf 7896676335432727999999637777455620999998215776727789999850899355888510289-876133
Q 000316 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1678)
Q Consensus 161 ~~~y~~~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~-HpNIV~ 239 (1678)
...|+..+..+-++.+.||+.. .++..+.+|......... ..... +|...+..+. +--+.+
T Consensus 13 ~~~~~~~~~~~G~s~~~v~rv~--------~~~~~~vlk~~~~~~~~~--~~~~~--------~E~~~l~~l~~~vpvP~ 74 (263)
T d1j7la_ 13 IEKYRCVKDTEGMSPAKVYKLV--------GENENLYLKMTDSRYKGT--TYDVE--------REKDMMLWLEGKLPVPK 74 (263)
T ss_dssp HTTSEEEECSCCCSSSEEEEEE--------CSSCEEEEEEECGGGTTS--TTCHH--------HHHHHHHHHTTTSCCCC
T ss_pred HHCEEEEECCCCCCCCCEEEEE--------ECCCEEEEEECCCCCCCC--HHHHH--------HHHHHHHHHHCCCCCCC
T ss_conf 1352799767899877189999--------089869999848876532--55699--------99999998760699872
Q ss_pred EEEEEEECCEEEEECCCCCC-CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH-------------------------
Q ss_conf 31699938967785138999-9888986199998879999999999999999989-------------------------
Q 000316 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH------------------------- 293 (1678)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-~L~~~l~~~~~~~l~~~~i~~i~~qil~aL~yLH------------------------- 293 (1678)
++++...++..|+||++++| .+.+.... . . .. ..+..++...+..+|
T Consensus 75 vl~~~~~~~~~~lv~~~l~G~~~~~~~~~--~-~-~~---~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (263)
T d1j7la_ 75 VLHFERHDGWSNLLMSEADGVLCSEEYED--E-Q-SP---EKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLN 147 (263)
T ss_dssp EEEEEEETTEEEEEEECCSSEEHHHHTTT--C-S-CH---HHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHH
T ss_pred EEEEEECCCCEEEEEEECCCCCCCCCCCC--C-C-CH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 89997508964999986043343543344--0-2-69---9999989999999855684214357644656555778998
Q ss_pred ----------------------------H------CCCEECCCCCCCEEECCCCCEEEEEEECCCCCC
Q ss_conf ----------------------------4------892206899897375579941599972688544
Q 000316 294 ----------------------------S------LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 294 ----------------------------~------~~IiHRDLKP~NILl~~~g~~~iKI~DFGlar~ 327 (1678)
. ..++|+|+.|.|||+++++ .+-|+||+.+..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~--~~~lIDwe~a~~ 213 (263)
T d1j7la_ 148 NDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK--VSGFIDLGRSGR 213 (263)
T ss_dssp TTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTE--EEEECCCTTCEE
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCC--EEEEEECHHCCC
T ss_conf 776555543033232005799999999844986781789860047642364996--599960231441
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.92 E-value=0.00055 Score=39.97 Aligned_cols=100 Identities=12% Similarity=0.169 Sum_probs=50.1
Q ss_pred EEEEEECCCEEEEEECCCCCEEE------EEEC-CCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCC
Q ss_conf 89999409929999689992999------9931-588769998-089999999959993999986999988876950589
Q 000316 1526 WIAAGLSSGQCRLFDVRSGNVIA------SWRA-HDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHT 1597 (1678)
Q Consensus 1526 ~LasGs~Dg~I~iWD~rtg~~i~------~l~g-H~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~ 1597 (1678)
+.++-+..+.|..||+.....+. .+.+ .......++ ..+|++.++....+.|.+||...+ .....+....
T Consensus 190 lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g--~~~~~i~~p~ 267 (314)
T d1pjxa_ 190 LIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGG--QPKMRIRCPF 267 (314)
T ss_dssp EEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCB--SCSEEEECSS
T ss_pred EEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCC--EEEEEEECCC
T ss_conf 99986024311776116765430156899713356664102578347857999827999999969999--7999997999
Q ss_pred CCEE--EEEECCCEE-EEEECCC-EEEEECCCCC
Q ss_conf 9889--997529999-9994897-5999567788
Q 000316 1598 NGIS--GFSVWGQDV-ISISNNK-IGLSSLSKSA 1627 (1678)
Q Consensus 1598 ~~V~--afSpdg~~L-aSgs~D~-I~iwdl~~~~ 1627 (1678)
.... +|.++++.| ++.+.++ |...++...+
T Consensus 268 ~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G 301 (314)
T d1pjxa_ 268 EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp SCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred CCEEEEEEECCCCEEEEEECCCCCEEEEECCCCC
T ss_conf 9878999928989999998789919999789999
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.85 E-value=0.0007 Score=39.20 Aligned_cols=335 Identities=9% Similarity=0.024 Sum_probs=149.2
Q ss_pred ECCCCEEEEECCCCEEEE-ECC---CCCCEEEEEEECCCCEEEEEECC-----CCCCCEEEEEECCCCEEEEEE--ECCC
Q ss_conf 199979999689842689-412---66647999991499989997217-----897775999969998388897--1378
Q 000316 1305 GGLKDESPWKIKASILSS-IRA---HHGALRSVAVGQDECTVFTAGIG-----PGFKGTVQKWELTRINCVSGY--YGHE 1373 (1678)
Q Consensus 1305 S~D~~v~lWd~~g~~l~t-l~g---H~~~V~svafspdg~~LaSgs~d-----~~~DgtVrIWDl~tg~~l~tl--~gH~ 1373 (1678)
..++.+.+|++....... +.. ..-.+....||||+++++.+... -++.+...++|+.+++..... .+..
T Consensus 34 ~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~~~~~~ 113 (465)
T d1xfda1 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSN 113 (465)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCS
T ss_pred ECCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCEEECCCCCCCC
T ss_conf 28996999987899889987276444455321389898886999984510047603352899985688456415766776
Q ss_pred CCEEEEEECCCCCCEE-ECCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 6477986539999178-279959999799994569960467665566899987533345544433457777783786315
Q 000316 1374 EVVNDICVLSSSGRIA-SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFD 1452 (1678)
Q Consensus 1374 ~~V~sI~fsp~~~~la-S~DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~ 1452 (1678)
..+....|+|++..+| ..++.|.+.+..++..++.......... .++....+..-.+.
T Consensus 114 ~~l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~~~~i---------------------~nG~~d~vyeee~~ 172 (465)
T d1xfda1 114 AKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVI---------------------YNGLSDWLYEEEIL 172 (465)
T ss_dssp CCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTE---------------------EEEECCHHHHHTTS
T ss_pred CCCCEEEECCCCCEEEEEECCEEEEEECCCCCEEEEECCCCCCEE---------------------ECCCCCHHHHHHHC
T ss_conf 431100242678569999613299995489965897112676604---------------------43664310012303
Q ss_pred CCCEEEEEEECCCCEEEEEECC-CCEEEEECCC--C---EEEEEEECCCCCCCCC-CCCEEEEE---------ECCCC--
Q ss_conf 9830676761499799999789-9199998889--9---0358861799755678-75107875---------08975--
Q 000316 1453 GNLYTCLHHIECVERLVVGIGN-GSLRFIDINQ--G---QKLHLWRGEPTELGFP-SLVSAICA---------CGSEK-- 1514 (1678)
Q Consensus 1453 ~~~vt~ia~sp~g~~Lvsgs~D-gtIkiWDl~t--g---~~i~~l~~~~~~v~~~-~~V~~ia~---------~~~~~-- 1514 (1678)
. ....+.|+|+|+.|+....| ..|..+.+.. + ..+..++-.......+ ..+.-+.+ .+...
T Consensus 173 ~-~~~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~~~~p~~~~~~Yp~~G~~np~~~l~v~d~~~~~~~~~~~~~~~~~ 251 (465)
T d1xfda1 173 K-THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPR 251 (465)
T ss_dssp S-SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGG
T ss_pred C-CCCEEEECCCCCEEEEEEECCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCC
T ss_conf 6-643489779898689999536666146412344544431334530256888972137998368981789995257676
Q ss_pred -----CCCCCCCCCCCEEEEEEC-C---CEEEEEECCCCCEEEEEEC-CCCCEE----EEE-CCCCCE--EEEEE-CCC-
Q ss_conf -----445865579988999940-9---9299996899929999931-588769----998-089999--99995-999-
Q 000316 1515 -----MQAGGAVASPSWIAAGLS-S---GQCRLFDVRSGNVIASWRA-HDGYVT----KLA-APEDHL--LVSSS-LDK- 1575 (1678)
Q Consensus 1515 -----~s~dg~~p~g~~LasGs~-D---g~I~iWD~rtg~~i~~l~g-H~~~V~----sIa-spdg~~--LaSgS-~Dg- 1575 (1678)
+....+.+++.+++.... + ..+.++|..+|++...+.. ..++|. ... +++|+. ++..+ .+|
T Consensus 252 ~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~ 331 (465)
T d1xfda1 252 MREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (465)
T ss_dssp GSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred CCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCEEECCCCCEEECCCCCEEEEEEEEEECCC
T ss_conf 66630456687579938999974100301379970799927877897278517356786057468980577776543166
Q ss_pred -CEEEEECCCC----CCCCCEEEECCCCCEE---EEEECCCEEE-EEECCC---EEEEECCCCCCCCCCCEECCCEEEEE
Q ss_conf -3999986999----9888769505899889---9975299999-994897---59995677889789610003102343
Q 000316 1576 -TLRIWDLRRN----WPSQPTVFKGHTNGIS---GFSVWGQDVI-SISNNK---IGLSSLSKSADEDGQHRLVPQKLYMV 1643 (1678)
Q Consensus 1576 -tI~IWDl~~~----~~~~~~~l~gH~~~V~---afSpdg~~La-Sgs~D~---I~iwdl~~~~~~~g~~~~~~~kl~~~ 1643 (1678)
.+...++... .......+....-.|. +++.+++.+. ++..++ -.+|.+...+.....+ ....+
T Consensus 332 ~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~hly~v~l~g~~~~~~--lt~~~--- 406 (465)
T d1xfda1 332 GKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQC--LSCDL--- 406 (465)
T ss_dssp SCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBC--SSTTS---
T ss_pred CCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCCEE--ECCCC---
T ss_conf 7168998315666678862698226992199778983899999999968999826899997789986055--31446---
Q ss_pred ECCCCCCCCEEEEEEECCCCEEEEEEC
Q ss_conf 069876574899999449989999948
Q 000316 1644 DNGAKNLSVLSSISILPFSRLFLVGTE 1670 (1678)
Q Consensus 1644 ~~g~~h~~~I~siafsPd~~lLatgs~ 1670 (1678)
.......++.|+|+++.++....
T Consensus 407 ----~~~~~~~~~~~S~~~~y~v~~~s 429 (465)
T d1xfda1 407 ----VENCTYFSASFSHSMDFFLLKCE 429 (465)
T ss_dssp ----SSSCCCCEEEECTTSSEEEEECC
T ss_pred ----CCCCCEEEEEECCCCCEEEEEEE
T ss_conf ----78898799999999999999800
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.44 E-value=0.0025 Score=35.16 Aligned_cols=97 Identities=8% Similarity=-0.141 Sum_probs=41.5
Q ss_pred EECCCCCCCCCCEEEEEECCCCEEEEECCCC-EEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEE
Q ss_conf 1059999889986999919997999968984-268941266647999991499989997217897775999969998388
Q 000316 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1678)
Q Consensus 1288 ~fSpdg~~~~~~~LasgS~D~~v~lWd~~g~-~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l 1366 (1678)
+|.++|.+ ..+-...+.|.-|+.++. ....+.........+++++||+.+++...+....+.+...+..++...
T Consensus 46 ~~D~~G~L-----y~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~~~ 120 (319)
T d2dg1a1 46 NFDRQGQL-----FLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ 120 (319)
T ss_dssp EECTTSCE-----EEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred EECCCCCE-----EEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEE
T ss_conf 89999999-----9997799999999899995999994899870389999999999995689731104998738996364
Q ss_pred EEEEC--CCCCEEEEEECCCCCCEE
Q ss_conf 89713--786477986539999178
Q 000316 1367 SGYYG--HEEVVNDICVLSSSGRIA 1389 (1678)
Q Consensus 1367 ~tl~g--H~~~V~sI~fsp~~~~la 1389 (1678)
..... -....+.+++.+++...+
T Consensus 121 ~~~~~~~~~~~~nd~~~d~~G~l~v 145 (319)
T d2dg1a1 121 DIIEDLSTAYCIDDMVFDSKGGFYF 145 (319)
T ss_dssp EEECSSSSCCCEEEEEECTTSCEEE
T ss_pred EECCCCCCCCCCCCEEEEECCCEEE
T ss_conf 4426777555875226773065320
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.42 E-value=0.00092 Score=38.36 Aligned_cols=142 Identities=13% Similarity=0.021 Sum_probs=77.4
Q ss_pred EEEEEEECCEEEEEEEECCCCCCCCCCEEEEEEEECCC-CCCHH----HHHHHHHHCCCCCHHHHHHHCCCC-C--CCCC
Q ss_conf 63354327279999996377774556209999982157-76727----789999850899355888510289-8--7613
Q 000316 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQ----ESKNFLRLIGVPSFDESSVPGCLR-H--PNVA 238 (1678)
Q Consensus 167 ~~~IG~Gsfg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~-~~~~~----~~~~~l~~~~~~al~Ei~iL~~l~-H--pNIV 238 (1678)
.+.||.|....||++.+. ..+..+.+|.-... +..++ ...+.. +|...|+.+. + ..+.
T Consensus 31 ~~eig~G~~N~vfrV~~~------~~~~svivKqa~p~~r~~g~~~~~~~~R~~--------~E~~~L~~~~~~~p~~vP 96 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQ------EHDRALIIKQAVPYAKVVGESWPLTIDRAR--------IESSALIRQGEHVPHLVP 96 (392)
T ss_dssp EEECCSSSSEEEEEEEC----------CEEEEEEECCGGGC--CCCCCCTTHHH--------HHHHHHHHHHTTCGGGSC
T ss_pred EEEECCCCEEEEEEEEEC------CCCEEEEEECCCCHHCCCCCCCCCCHHHHH--------HHHHHHHHHHHHCCCCCC
T ss_conf 998079852768999957------998489996177130346777888778999--------999999986505798855
Q ss_pred CEEEEEEECCEEEEECCCCCC--CHHHHHHHCCCCCCCHHHHHHHHHHH-------------------------------
Q ss_conf 331699938967785138999--98889861999988799999999999-------------------------------
Q 000316 239 PVLGLLKTSGLITSVIPKTPY--TLENILQFSPNALKSEWHVRFLMYQL------------------------------- 285 (1678)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g--~L~~~l~~~~~~~l~~~~i~~i~~qi------------------------------- 285 (1678)
+++.+ +++..++|||++++ .+...+.......-....+..++..+
T Consensus 97 ~v~~~--d~~~~~lvmE~L~~~~~~~~~l~~~~~~~~~a~~lg~~La~~h~~~~~~~~~~~~~~~~~~~~~n~~l~~~~e 174 (392)
T d2pula1 97 RVFYS--DTEMAVTVMEDLSHLKIARKGLIEGENYPHLSQHIGEFLGKTLFYSSDYALEPKVKKQLVKQFTNPELCDITE 174 (392)
T ss_dssp CEEEE--ETTTTEEEECCCTTSEEHHHHHHHTCCCTTHHHHHHHHHHHHHHHTSTTTSCHHHHHHHHHHTCCHHHHHHHH
T ss_pred EEEEE--CCCCCEEEEECCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHH
T ss_conf 28998--5988779871357765302220154212899999999999999873503344211101233446578887777
Q ss_pred ---------------------------------HHHHHHHH------HCCCEECCCCCCCEEECCCCCEEEEEEECCCCC
Q ss_conf ---------------------------------99999989------489220689989737557994159997268854
Q 000316 286 ---------------------------------LSAIAYLH------SLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 286 ---------------------------------l~aL~yLH------~~~IiHRDLKP~NILl~~~g~~~iKI~DFGlar 326 (1678)
......+. ...++|+|+.|.|||+++++ ++|+||..|.
T Consensus 175 ~~~~~~py~~~~~~~~~~~~~~~~~~l~~d~~l~~~~~~l~~~~~~~~~~LiHGDl~~gNIlv~~~~---~~vID~E~a~ 251 (392)
T d2pula1 175 RLVFTDPFFDHDTNDFEEELRPFVEKLWNNDSVKIEAAKLKKSFLTSAETLIHGDLHTGSIFASEHE---TKVIDPEFAF 251 (392)
T ss_dssp HHTTTGGGTTCTTCCCCGGGHHHHHHHHTCHHHHHHHHHHHHHHHHBCCEEECSCCCGGGEEECSSC---EEECCCTTCE
T ss_pred HHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCEEECCCC---EEEECHHHCC
T ss_conf 6401047889887410654557787655207899999998743236886003357767846675993---0895226522
Q ss_pred C
Q ss_conf 4
Q 000316 327 F 327 (1678)
Q Consensus 327 ~ 327 (1678)
.
T Consensus 252 ~ 252 (392)
T d2pula1 252 Y 252 (392)
T ss_dssp E
T ss_pred C
T ss_conf 2
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.32 E-value=0.0035 Score=34.16 Aligned_cols=77 Identities=6% Similarity=-0.107 Sum_probs=50.2
Q ss_pred EEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCE
Q ss_conf 9999689842689412666479999914999899972178977759999699983888971378647798653999917
Q 000316 1310 ESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI 1388 (1678)
Q Consensus 1310 v~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~l 1388 (1678)
+.+-|.+|.-.+.+..+.+.+.+-+|||||+.||-..... ....+.+.+..++... .+..+.+......|++++..+
T Consensus 21 l~i~d~dG~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~i 97 (269)
T d2hqsa1 21 LRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES-GRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKL 97 (269)
T ss_dssp EEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEE
T ss_pred EEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEEEEC-CCCCEEEEECCCCCEE-EEEEEECCCCCCEECCCCCEE
T ss_conf 9999289997679865898426038878999899998152-6751344311367506-776420245430244889864
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.31 E-value=0.0036 Score=34.07 Aligned_cols=63 Identities=14% Similarity=0.248 Sum_probs=42.1
Q ss_pred CCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEE-CCCCC-EEEEEECCCCEEEEECCC
Q ss_conf 7998899994099299996899929999931588769998-08999-999995999399998699
Q 000316 1522 ASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKLA-APEDH-LLVSSSLDKTLRIWDLRR 1584 (1678)
Q Consensus 1522 p~g~~LasGs~Dg~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~-~LaSgS~DgtI~IWDl~~ 1584 (1678)
.+|++.++....+.|.+||...+..+..+.......++++ .++++ ++++.+.++.|...++..
T Consensus 235 ~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~ 299 (314)
T d1pjxa_ 235 EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCC
T ss_conf 47857999827999999969999799999799998789999289899999987899199997899
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.24 E-value=0.0016 Score=36.65 Aligned_cols=137 Identities=15% Similarity=0.126 Sum_probs=75.7
Q ss_pred EEEEEC-CEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCC--CCCCCEEEEEE
Q ss_conf 354327-279999996377774556209999982157767277899998508993558885102898--76133316999
Q 000316 169 FIGICS-YSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PNVAPVLGLLK 245 (1678)
Q Consensus 169 ~IG~Gs-fg~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~H--pNIV~l~~~~~ 245 (1678)
.+..|. -+.||+... ..+..+.+|......... .. +|...|+.+.. -.+.+++.+..
T Consensus 17 ~~~~G~s~~~v~r~~~-------~~~~~~vlK~~~~~~~~~-----l~--------~E~~~l~~L~~~gvpvP~v~~~~~ 76 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSA-------QGRPVLFVKTDLSGALNE-----LQ--------DEAARLSWLATTGVPCAAVLDVVT 76 (255)
T ss_dssp ECSCTTSSCEEEEEEC-------TTSCCEEEEEECSCTTSC-----HH--------HHHHHHHHHHTTTCCBCCEEEEEE
T ss_pred ECCCCCCCCEEEEEEE-------CCCCEEEEEECCCCCHHH-----HH--------HHHHHHHHHHHCCCCCCCEEEECC
T ss_conf 7678654775899993-------898789999589667768-----99--------999999999865999886132224
Q ss_pred ECCEEEEECCCCCC-CHHHH--------------HHH-C--C--CCCC--CHH-HHHH----HH---------------H
Q ss_conf 38967785138999-98889--------------861-9--9--9988--799-9999----99---------------9
Q 000316 246 TSGLITSVIPKTPY-TLENI--------------LQF-S--P--NALK--SEW-HVRF----LM---------------Y 283 (1678)
Q Consensus 246 ~~~~l~lV~E~~~g-~L~~~--------------l~~-~--~--~~~l--~~~-~i~~----i~---------------~ 283 (1678)
+++..++||++++| ++.+. +.. . + ...+ ... .... +. .
T Consensus 77 ~~~~~~~v~~~i~G~~~~~~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T d1nd4a_ 77 EAGRDWLLLGEVPGQDLLSSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 156 (255)
T ss_dssp CSSCEEEEEECCSSEETTTSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred CCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 56615999874413554322126899999999999987368854488755412468899999987541101134011213
Q ss_pred HHHHHHHHHHH-------CCCEECCCCCCCEEECCCCCEEEEEEECCCCCC
Q ss_conf 99999999894-------892206899897375579941599972688544
Q 000316 284 QLLSAIAYLHS-------LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 284 qil~aL~yLH~-------~~IiHRDLKP~NILl~~~g~~~iKI~DFGlar~ 327 (1678)
.....+..+.. ..++|+|+.|.|||++.++ .+-|+||+.+..
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~--~~~iID~~~~~~ 205 (255)
T d1nd4a_ 157 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGR--FSGFIDCGRLGV 205 (255)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTE--EEEECCCTTCEE
T ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCC--EEEEEECHHCCC
T ss_conf 7999999998718765795678678887635773796--589998533265
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.05 E-value=0.0063 Score=32.27 Aligned_cols=95 Identities=11% Similarity=-0.007 Sum_probs=57.5
Q ss_pred ECCC--CCCCCCCEEEEEECCCCEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCC--CEEEEEECCCCE
Q ss_conf 0599--998899869999199979999689842689412666479999914999899972178977--759999699983
Q 000316 1289 PTPA--ASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK--GTVQKWELTRIN 1364 (1678)
Q Consensus 1289 fSpd--g~~~~~~~LasgS~D~~v~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~D--gtVrIWDl~tg~ 1364 (1678)
.||| |.. ++-.+ ++++.+.++.+...+.+..+.+.+...+|||||+.|+-.+...+.+ ..|.+.++.+++
T Consensus 6 ~sPdi~G~~-----v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~ 79 (281)
T d1k32a2 6 LNPDIHGDR-----IIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE 79 (281)
T ss_dssp EEEEEETTE-----EEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred CCCCCCCCE-----EEEEE-CCCEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCC
T ss_conf 588879999-----99990-996899989999879976699852677987899989999862898772289999825995
Q ss_pred EEEEEE------CCCCCEEEEEECCCCCCEE
Q ss_conf 888971------3786477986539999178
Q 000316 1365 CVSGYY------GHEEVVNDICVLSSSGRIA 1389 (1678)
Q Consensus 1365 ~l~tl~------gH~~~V~sI~fsp~~~~la 1389 (1678)
...... +.........|++++..++
T Consensus 80 ~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~ 110 (281)
T d1k32a2 80 IKRITYFSGKSTGRRMFTDVAGFDPDGNLII 110 (281)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEE
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 2886416887547644434310279887799
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=96.76 E-value=0.011 Score=30.64 Aligned_cols=230 Identities=13% Similarity=0.053 Sum_probs=114.1
Q ss_pred EEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEE--EC---CCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 599996999838889713786477986539999178--27---9959999799994569960467665566899987533
Q 000316 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SC---DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428 (1678)
Q Consensus 1354 tVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~la--S~---DgtIkIWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~ 1428 (1678)
.|.+-|...... ..+..+...+.+-+|+|++..+| +. ...+.+.+...+.......
T Consensus 20 ~l~i~d~dG~~~-~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 80 (269)
T d2hqsa1 20 ELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS------------------ 80 (269)
T ss_dssp EEEEEETTSCSC-EEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC------------------
T ss_pred EEEEECCCCCCC-EEEECCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEEEE------------------
T ss_conf 999992899976-7986589842603887899989999815267513443113675067764------------------
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC-CCEEE--EECCCCEEEEEEECCCCCCCCCCCCE
Q ss_conf 3455444334577777837863159830676761499799999789-91999--98889903588617997556787510
Q 000316 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN-GSLRF--IDINQGQKLHLWRGEPTELGFPSLVS 1505 (1678)
Q Consensus 1429 ~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D-gtIki--WDl~tg~~i~~l~~~~~~v~~~~~V~ 1505 (1678)
.........++|++..++..... +...+ +............... ...
T Consensus 81 -----------------------~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 130 (269)
T d2hqsa1 81 -----------------------FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS-------NNT 130 (269)
T ss_dssp -----------------------CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS-------CEE
T ss_pred -----------------------EECCCCCCEECCCCCEEEEEEECCCCCCEEECCCCCCCCEEEEECCC-------CCC
T ss_conf -----------------------20245430244889864676402786410000222122000010144-------211
Q ss_pred EEEEECCCCCCCCCCCCCCCE-EEEEECCC--EEEEEECCCCCEEEEEECCCCCEEEEE-CCCCCEEEEEEC-CCCEEEE
Q ss_conf 787508975445865579988-99994099--299996899929999931588769998-089999999959-9939999
Q 000316 1506 AICACGSEKMQAGGAVASPSW-IAAGLSSG--QCRLFDVRSGNVIASWRAHDGYVTKLA-APEDHLLVSSSL-DKTLRIW 1580 (1678)
Q Consensus 1506 ~ia~~~~~~~s~dg~~p~g~~-LasGs~Dg--~I~iWD~rtg~~i~~l~gH~~~V~sIa-spdg~~LaSgS~-DgtI~IW 1580 (1678)
...+. +++.. +++...+| .|...+...+.... +........... +|+++.++..+. ++...+|
T Consensus 131 ~~~~~-----------~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~ 198 (269)
T d2hqsa1 131 EPTWF-----------PDSQNLAFTSDQAGRPQVYKVNINGGAPQR-ITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIA 198 (269)
T ss_dssp EEEEC-----------TTSSEEEEEECTTSSCEEEEEETTSSCCEE-CCCSSSEEEEEEECTTSSEEEEEEECSSCEEEE
T ss_pred CCCCC-----------CCCCCCEECCCCCCCCEEEEEECCCCCCEE-EECCCCCCCCCCCCCCCCEEEEEEECCCCEEEE
T ss_conf 45434-----------554433000012687438654213310001-000122223432234543057786058801256
Q ss_pred ECCCCCCCCCEEEECCCCCEE--EEEECCCEEEEEEC-C--C-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCCCEE
Q ss_conf 869999888769505899889--99752999999948-9--7-5999567788978961000310234306987657489
Q 000316 1581 DLRRNWPSQPTVFKGHTNGIS--GFSVWGQDVISISN-N--K-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLSVLS 1654 (1678)
Q Consensus 1581 Dl~~~~~~~~~~l~gH~~~V~--afSpdg~~LaSgs~-D--~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~ 1654 (1678)
...... . ............ .|||||+.|+..+. + . |.++++. |.... ++. ...+.+.
T Consensus 199 ~~~~~~-~-~~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~d------g~~~~---~lt------~~~g~~~ 261 (269)
T d2hqsa1 199 KQDLAT-G-GVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD------GRFKA---RLP------ATDGQVK 261 (269)
T ss_dssp EEETTT-C-CEEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETT------SCCEE---ECC------CSSSEEE
T ss_pred EEECCC-C-CCEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECC------CCCEE---EEE------CCCCCEE
T ss_conf 760356-4-40585068654455898999999999817998479999999------99779---985------7998588
Q ss_pred EEEEECC
Q ss_conf 9999449
Q 000316 1655 SISILPF 1661 (1678)
Q Consensus 1655 siafsPd 1661 (1678)
..+|+|-
T Consensus 262 ~p~WSP~ 268 (269)
T d2hqsa1 262 FPAWSPY 268 (269)
T ss_dssp EEEECCC
T ss_pred EEEECCC
T ss_conf 3782898
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.40 E-value=0.018 Score=29.01 Aligned_cols=224 Identities=9% Similarity=0.036 Sum_probs=111.8
Q ss_pred CCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEE-C-C----CCEEEEECC
Q ss_conf 647999991499989997217897775999969998388897137864779865399991782-7-9----959999799
Q 000316 1328 GALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS-C-D----GTLHVWNSQ 1401 (1678)
Q Consensus 1328 ~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS-~-D----gtIkIWD~~ 1401 (1678)
..+..++|.++|++.++-.. .+.|..|+..+++....+.......+.+++.+++..+++ . + +.+...+..
T Consensus 40 ~~lEG~~~D~~G~Ly~~D~~----~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~ 115 (319)
T d2dg1a1 40 LQLEGLNFDRQGQLFLLDVF----EGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 115 (319)
T ss_dssp CCEEEEEECTTSCEEEEETT----TCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CCCEECEECCCCCEEEEECC----CCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCC
T ss_conf 67470789999999999779----99999998999959999948998703899999999999956897311049987389
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC------C
Q ss_conf 9945699604676655668999875333455444334577777837863159830676761499799999789------9
Q 000316 1402 TGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN------G 1475 (1678)
Q Consensus 1402 tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D------g 1475 (1678)
++........... .....-+++.++|+..++.... +
T Consensus 116 ~~~~~~~~~~~~~--------------------------------------~~~~nd~~~d~~G~l~vtd~~~~~~~~~g 157 (319)
T d2dg1a1 116 GDNLQDIIEDLST--------------------------------------AYCIDDMVFDSKGGFYFTDFRGYSTNPLG 157 (319)
T ss_dssp SCSCEEEECSSSS--------------------------------------CCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred CCEEEEECCCCCC--------------------------------------CCCCCCEEEEECCCEEECCCCCCCCCCCC
T ss_conf 9636444267775--------------------------------------55875226773065320013540025742
Q ss_pred CEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEE-EEEECCCEEEEEECCCC-CEEEEE---
Q ss_conf 1999988899035886179975567875107875089754458655799889-99940992999968999-299999---
Q 000316 1476 SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWI-AAGLSSGQCRLFDVRSG-NVIASW--- 1550 (1678)
Q Consensus 1476 tIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~L-asGs~Dg~I~iWD~rtg-~~i~~l--- 1550 (1678)
.+..++.. +..+..+.. .....+.++++ ++++.+ ++-+..+.|+.||+... ......
T Consensus 158 ~v~~~~~d-g~~~~~~~~------~~~~pnGia~s-----------~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~ 219 (319)
T d2dg1a1 158 GVYYVSPD-FRTVTPIIQ------NISVANGIALS-----------TDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT 219 (319)
T ss_dssp EEEEECTT-SCCEEEEEE------EESSEEEEEEC-----------TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE
T ss_pred EEEEEECC-CCEEEEEEE------CCCEEEEEEEC-----------CCCCEEEEECCCCCCEEEEEECCCCCEECCCCCE
T ss_conf 15788416-633578861------23301000101-----------2221278740468914799976998362024633
Q ss_pred ----ECCCCCEEEEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECC------CCCEE--EEEECCCEEEEEE
Q ss_conf ----31588769998-08999999995999399998699998887695058------99889--9975299999994
Q 000316 1551 ----RAHDGYVTKLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGH------TNGIS--GFSVWGQDVISIS 1614 (1678)
Q Consensus 1551 ----~gH~~~V~sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH------~~~V~--afSpdg~~LaSgs 1614 (1678)
......-..++ ..+|++.++....+.|.++|. .+ +.+..+... ...+. +|.+++..++..+
T Consensus 220 ~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G--~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~ 293 (319)
T d2dg1a1 220 IPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RG--YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 293 (319)
T ss_dssp EEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TS--CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred EEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC-CC--CEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEC
T ss_conf 3312577641036417389999999848998999979-99--59889968875778675046677807998899985
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=95.85 E-value=0.032 Score=27.15 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=40.5
Q ss_pred EEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCC----CCEEEEEECCCCCCE-EE------CCCCEEEEECC
Q ss_conf 99914999899972178977759999699983888971378----647798653999917-82------79959999799
Q 000316 1333 VAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHE----EVVNDICVLSSSGRI-AS------CDGTLHVWNSQ 1401 (1678)
Q Consensus 1333 vafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~----~~V~sI~fsp~~~~l-aS------~DgtIkIWD~~ 1401 (1678)
+++. ++ .++.++. |+.+..-|.++|+......-.. ..+++--....+..+ ++ .+|.|+-+|++
T Consensus 111 ~a~~-~~-~i~~~~~----~g~l~alda~tG~~~w~~~~~~~~~~~~~t~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~ 184 (571)
T d2ad6a1 111 LAYG-AG-QIVKKQA----NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLK 184 (571)
T ss_dssp CEEE-TT-EEEEECT----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETT
T ss_pred CEEE-CC-EEEEEEC----CCCEEEEEHHHHHHHCCCCCCCCCCCCCEEECCEEECCEEEEEECCCCCCCCCCEEEEECC
T ss_conf 2650-88-6999917----9757821002112202344455443241453675758858885023442346747999888
Q ss_pred CCCEEEEECCC
Q ss_conf 99456996046
Q 000316 1402 TGKLLSVFAEQ 1412 (1678)
Q Consensus 1402 tg~~i~~l~~~ 1412 (1678)
+|+.+..+...
T Consensus 185 TG~~~W~~~t~ 195 (571)
T d2ad6a1 185 TGELKWRAFAT 195 (571)
T ss_dssp TCCEEEEEESS
T ss_pred CCCEEEEEECC
T ss_conf 98588997046
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=95.81 E-value=0.033 Score=27.05 Aligned_cols=74 Identities=7% Similarity=-0.156 Sum_probs=35.4
Q ss_pred CCEEEEECCCCEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEE--C--CCCCEEEEEECC
Q ss_conf 979999689842689412666479999914999899972178977759999699983888971--3--786477986539
Q 000316 1308 KDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY--G--HEEVVNDICVLS 1383 (1678)
Q Consensus 1308 ~~v~lWd~~g~~l~tl~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~--g--H~~~V~sI~fsp 1383 (1678)
+.+.-|+.++.....+. ....+.++++.+++.+++++ . ..+.++|..+++...... . -...++++.+.+
T Consensus 40 ~~I~r~d~~~g~~~~~~-~~~~~~~i~~~~dg~l~va~-~-----~gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~ 112 (295)
T d2ghsa1 40 RELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-D-----DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP 112 (295)
T ss_dssp TEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-T-----TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT
T ss_pred CEEEEEECCCCEEEEEE-CCCCCEEEEEECCCCEEEEE-E-----CCCEEEECCCCEEEEEEEEECCCCCCCCEEEEECC
T ss_conf 99999989989599998-99981798996599889997-3-----76389504645135786640478766101357979
Q ss_pred CCCCE
Q ss_conf 99917
Q 000316 1384 SSGRI 1388 (1678)
Q Consensus 1384 ~~~~l 1388 (1678)
++...
T Consensus 113 ~G~iw 117 (295)
T d2ghsa1 113 SGALW 117 (295)
T ss_dssp TSCEE
T ss_pred CCCEE
T ss_conf 99998
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=95.77 E-value=0.034 Score=26.94 Aligned_cols=225 Identities=11% Similarity=0.019 Sum_probs=110.3
Q ss_pred EEECC--CCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEE--EC-CC-----CEEEEECCCC
Q ss_conf 99149--998999721789777599996999838889713786477986539999178--27-99-----5999979999
Q 000316 1334 AVGQD--ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SC-DG-----TLHVWNSQTG 1403 (1678)
Q Consensus 1334 afspd--g~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~la--S~-Dg-----tIkIWD~~tg 1403 (1678)
..+|| |+.++-.+ ++.|.+.|+.+++.. .+..+.+.+...+|+|++..++ +. ++ .|.+++..++
T Consensus 5 ~~sPdi~G~~v~f~~-----~~dl~~~d~~~g~~~-~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g 78 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-----CDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG 78 (281)
T ss_dssp CEEEEEETTEEEEEE-----TTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred CCCCCCCCCEEEEEE-----CCCEEEEECCCCCEE-EEECCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEECCC
T ss_conf 258887999999990-----996899989999879-97669985267798789998999986289877228999982599
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC------CCE
Q ss_conf 45699604676655668999875333455444334577777837863159830676761499799999789------919
Q 000316 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN------GSL 1477 (1678)
Q Consensus 1404 ~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D------gtI 1477 (1678)
+..+........ ... ........++|+++.++..... ..+
T Consensus 79 ~~~~lt~~~~~~---------------------------------~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 124 (281)
T d1k32a2 79 EIKRITYFSGKS---------------------------------TGR-RMFTDVAGFDPDGNLIISTDAMQPFSSMTCL 124 (281)
T ss_dssp EEEECCCCCEEE---------------------------------ETT-EECSEEEEECTTCCEEEEECTTSSSTTCCEE
T ss_pred CEEEEEECCCCC---------------------------------CCC-CCCCCCCCCCCCCCEEEEEECCCCCCCCEEE
T ss_conf 528864168875---------------------------------476-4443431027988779999713787652024
Q ss_pred EEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC-EEEEEEC-----------CCEEEEEECCCCC
Q ss_conf 999888990358861799755678751078750897544586557998-8999940-----------9929999689992
Q 000316 1478 RFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS-WIAAGLS-----------SGQCRLFDVRSGN 1545 (1678)
Q Consensus 1478 kiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~-~LasGs~-----------Dg~I~iWD~rtg~ 1545 (1678)
...+...+.......+. ...... +++. .++.... ......+......
T Consensus 125 ~~~~~~~~~~~~~~~~~---------~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (281)
T d1k32a2 125 YRVENDGINFVPLNLGP---------ATHILF------------ADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGA 183 (281)
T ss_dssp EEEEGGGTEEEECCSCS---------CSEEEE------------ETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTE
T ss_pred EEECCCCCEEEEECCCC---------CCEEEE------------CCCCEEEEEECCCCCEEEEECCCCCCEEEEECCCCC
T ss_conf 65158776068801786---------523464------------699849886204664044420588620444113661
Q ss_pred EEEEEECCCCCEEEEE-CCCCCEEEEEECC--CCEEEEECCCCCCCCCEEEEC-CCCCEEEEEECCCEEEEEECCCEEEE
Q ss_conf 9999931588769998-0899999999599--939999869999888769505-89988999752999999948975999
Q 000316 1546 VIASWRAHDGYVTKLA-APEDHLLVSSSLD--KTLRIWDLRRNWPSQPTVFKG-HTNGISGFSVWGQDVISISNNKIGLS 1621 (1678)
Q Consensus 1546 ~i~~l~gH~~~V~sIa-spdg~~LaSgS~D--gtI~IWDl~~~~~~~~~~l~g-H~~~V~afSpdg~~LaSgs~D~I~iw 1621 (1678)
....... ........ +++ ..+.....+ ..|.++|+..+.. ..+.. ....+..|||||+.|+...+..|+++
T Consensus 184 ~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~d~~g~~~---~~lt~~~~~~~~~~SpDG~~I~f~~~~~l~~~ 258 (281)
T d1k32a2 184 FKKIVDM-STHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL---RKHTSFTDYYPRHLNTDGRRILFSKGGSIYIF 258 (281)
T ss_dssp EEEEECC-SSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC---EECCCCCSSCEEEEEESSSCEEEEETTEEEEE
T ss_pred EEECCCC-CCCCCEEEEECC-CCCEECCCCCCCCEEEEECCCCCE---EEEECCCCCCCCCCCCCCCEEEEEECCEEEEE
T ss_conf 2240477-666421331035-320001134552128996899965---98105898644328679899999859999999
Q ss_pred ECC
Q ss_conf 567
Q 000316 1622 SLS 1624 (1678)
Q Consensus 1622 dl~ 1624 (1678)
++.
T Consensus 259 d~~ 261 (281)
T d1k32a2 259 NPD 261 (281)
T ss_dssp CTT
T ss_pred ECC
T ss_conf 899
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.48 E-value=0.043 Score=26.19 Aligned_cols=130 Identities=13% Similarity=0.058 Sum_probs=66.4
Q ss_pred EEEEEEEECCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCC-----CCCCCE--EEEEEECC
Q ss_conf 79999996377774556209999982157767277899998508993558885102898-----761333--16999389
Q 000316 176 SIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH-----PNVAPV--LGLLKTSG 248 (1678)
Q Consensus 176 g~Vy~a~~~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~H-----pNIV~l--~~~~~~~~ 248 (1678)
..||++.. ++|..+++|+...+..+... .. .|...+..|.. +..+.. -..+...+
T Consensus 36 N~vy~v~~-------~dg~~~VlK~~rp~~~s~~~---i~--------~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~ 97 (325)
T d1zyla1 36 NRVYQFQD-------EDRRRFVVKFYRPERWTADQ---IL--------EEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG 97 (325)
T ss_dssp SEEEEECC-------TTCCCEEEEEECTTTSCHHH---HH--------HHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT
T ss_pred CEEEEEEC-------CCCCEEEEEEECCCCCCHHH---HH--------HHHHHHHHHHHCCCCCCCCEECCCCEEEEEEE
T ss_conf 02699983-------89997999984787788999---99--------99999999985599878752068980566534
Q ss_pred EEEEECCCCCC-CH-----HHHHH-------------HC--C-CCCCCH-------------------H---HHHHHHHH
Q ss_conf 67785138999-98-----88986-------------19--9-998879-------------------9---99999999
Q 000316 249 LITSVIPKTPY-TL-----ENILQ-------------FS--P-NALKSE-------------------W---HVRFLMYQ 284 (1678)
Q Consensus 249 ~l~lV~E~~~g-~L-----~~~l~-------------~~--~-~~~l~~-------------------~---~i~~i~~q 284 (1678)
..+.++++++| .+ ..+-. .. + ...... . .....+.+
T Consensus 98 ~~~~l~~~~~G~~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (325)
T d1zyla1 98 FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDE 177 (325)
T ss_dssp EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHH
T ss_pred EEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
T ss_conf 79999865277688999999999989999998863035786556778978876656899987476998898999999999
Q ss_pred HHHHHHHHH----HCCCEECCCCCCCEEECCCCCEEEEEEECCCCCC
Q ss_conf 999999989----4892206899897375579941599972688544
Q 000316 285 LLSAIAYLH----SLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1678)
Q Consensus 285 il~aL~yLH----~~~IiHRDLKP~NILl~~~g~~~iKI~DFGlar~ 327 (1678)
+...+.-.- ..++||+|+.|.|||+++ + ..++||+-++.
T Consensus 178 l~~~l~~~~~~~~p~~liHgDlh~~NvL~~~-~---~~~IDFdd~~~ 220 (325)
T d1zyla1 178 LIAAVTAHWREDFTVLRLHGDCHAGNILWRD-G---PMFVDLDDARN 220 (325)
T ss_dssp HHHHHHHHCCSCSCCEECCSSCSGGGEEESS-S---EEECCCTTCCE
T ss_pred HHHHHHHHCCCCCCCEEECCCCCCCCEEEEC-C---CEEEECHHCCC
T ss_conf 9999998454568712024788804287838-9---35886520146
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.27 E-value=0.04 Score=26.38 Aligned_cols=34 Identities=15% Similarity=0.388 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
Q ss_conf 5889999999999998362367873569999997
Q 000316 1090 TVLQVAASTLMAICQRIGPDLTALHVLPHLKELF 1123 (1678)
Q Consensus 1090 ~~~~~~~~~~~~~~~r~g~~~~~~~~~~~l~~~f 1123 (1678)
++-..|+.++-.++...|++-....++|.+.+++
T Consensus 456 ~VR~~A~~~L~~l~~~~~~~~~~~~i~~~l~~~~ 489 (588)
T d1b3ua_ 456 AIREAATSNLKKLVEKFGKEWAHATIIPKVLAMS 489 (588)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHTHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 6899999999999998393878999999999986
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.99 E-value=0.059 Score=25.18 Aligned_cols=209 Identities=12% Similarity=0.087 Sum_probs=106.1
Q ss_pred EEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCCEEEEECCCCCEEEEECC
Q ss_conf 99991499989997217897775999969998388897137864779865399991782799599997999945699604
Q 000316 1332 SVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAE 1411 (1678)
Q Consensus 1332 svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V~sI~fsp~~~~laS~DgtIkIWD~~tg~~i~~l~~ 1411 (1678)
+..|.+.+..|.=... ..+.|..||..+++.. .+. ....+.++++.+++..++++...+..+|..+++.......
T Consensus 22 gp~wd~~~~~l~wvDi---~~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va~~~gl~~~d~~tg~~~~l~~~ 96 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNI---LERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAEL 96 (295)
T ss_dssp EEEEETTTTEEEEEEG---GGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECS
T ss_pred CCEEECCCCEEEEEEC---CCCEEEEEECCCCEEE-EEE-CCCCCEEEEEECCCCEEEEEECCCEEEECCCCEEEEEEEE
T ss_conf 8759899999999987---8999999989989599-998-9998179899659988999737638950464513578664
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC----CCEEEEECCCCEE
Q ss_conf 676655668999875333455444334577777837863159830676761499799999789----9199998889903
Q 000316 1412 QSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN----GSLRFIDINQGQK 1487 (1678)
Q Consensus 1412 ~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D----gtIkiWDl~tg~~ 1487 (1678)
.... .......+.+.++|+..++...+ +.-.+|.+..++.
T Consensus 97 ~~~~------------------------------------~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~ 140 (295)
T d2ghsa1 97 ESDL------------------------------------PGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV 140 (295)
T ss_dssp STTC------------------------------------TTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE
T ss_pred ECCC------------------------------------CCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCE
T ss_conf 0478------------------------------------7661013579799999887426431333305766229968
Q ss_pred EEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC-EEEEEECCCEEEEEECCC------CC--EEEEEECCCCCEE
Q ss_conf 58861799755678751078750897544586557998-899994099299996899------92--9999931588769
Q 000316 1488 LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS-WIAAGLSSGQCRLFDVRS------GN--VIASWRAHDGYVT 1558 (1678)
Q Consensus 1488 i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~-~LasGs~Dg~I~iWD~rt------g~--~i~~l~gH~~~V~ 1558 (1678)
....... ...+.++++ ++++ ++++.+..+.|..++... ++ ....+.+..+...
T Consensus 141 ~~~~~~~-------~~~Ng~~~s-----------~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pd 202 (295)
T d2ghsa1 141 TKLFADI-------SIPNSICFS-----------PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMD 202 (295)
T ss_dssp EEEEEEE-------SSEEEEEEC-----------TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEE
T ss_pred EEEEECC-------CCCCEEEEC-----------CCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 9986506-------876402465-----------8776689851566324676453555532453578841675556663
Q ss_pred EEE-CCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCCEEE
Q ss_conf 998-08999999995999399998699998887695058998899
Q 000316 1559 KLA-APEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNGISG 1602 (1678)
Q Consensus 1559 sIa-spdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~V~a 1602 (1678)
.++ ..+|++.++.-..+.|..||.. + +.+..+.-....+++
T Consensus 203 G~~vD~~GnlWva~~~~g~V~~~dp~-G--~~~~~i~lP~~~~T~ 244 (295)
T d2ghsa1 203 GSVCDAEGHIWNARWGEGAVDRYDTD-G--NHIARYEVPGKQTTC 244 (295)
T ss_dssp EEEECTTSCEEEEEETTTEEEEECTT-C--CEEEEEECSCSBEEE
T ss_pred CEEECCCCCEEEEEECCCCEEEECCC-C--CEEEEECCCCCCEEE
T ss_conf 26786999989532078846885699-9--286686389985279
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=94.73 E-value=0.068 Score=24.71 Aligned_cols=78 Identities=12% Similarity=0.042 Sum_probs=45.3
Q ss_pred EEEEEEEECCEEEEEEEECCCCCCC-CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCC-CCCEEEE
Q ss_conf 7633543272799999963777745-5620999998215776727789999850899355888510289876-1333169
Q 000316 166 PIAFIGICSYSIFEELASNFLSGCL-EDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN-VAPVLGL 243 (1678)
Q Consensus 166 ~~~~IG~Gsfg~Vy~a~~~~~~~~~-~~~~~vAiK~i~~~~~~~~~~~~~l~~~~~~al~Ei~iL~~l~HpN-IV~l~~~ 243 (1678)
.++.|+.|-.-.+|++...-..... .....+.+++.- +.... .... +|..+++.+.-.+ ..++++.
T Consensus 46 ~v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~~---idr~--------~E~~i~~~ls~~gl~Pkll~~ 113 (395)
T d1nw1a_ 46 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPETE---SHLV--------AESVIFTLLSERHLGPKLYGI 113 (395)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCCH---HHHH--------HHHHHHHHHHHTTSSSCEEEE
T ss_pred EEEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECC-CCCHH---HHHH--------HHHHHHHHHHHCCCCCEEEEE
T ss_conf 99991785334348999688775445789817999659-96116---5899--------999999999757999808998
Q ss_pred EEECCEEEEECCCCCC
Q ss_conf 9938967785138999
Q 000316 244 LKTSGLITSVIPKTPY 259 (1678)
Q Consensus 244 ~~~~~~l~lV~E~~~g 259 (1678)
+. + .+|+||++|
T Consensus 114 ~~--~--g~I~efi~g 125 (395)
T d1nw1a_ 114 FS--G--GRLEEYIPS 125 (395)
T ss_dssp ET--T--EEEECCCCE
T ss_pred CC--C--CEEEEEECC
T ss_conf 18--9--569997345
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.50 E-value=0.077 Score=24.34 Aligned_cols=74 Identities=22% Similarity=0.203 Sum_probs=38.9
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCCC---EEEEEECCCE
Q ss_conf 929999689992999993158876999808999999995999399998699998887695058998---8999752999
Q 000316 1534 GQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTNG---ISGFSVWGQD 1609 (1678)
Q Consensus 1534 g~I~iWD~rtg~~i~~l~gH~~~V~sIaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~~---V~afSpdg~~ 1609 (1678)
|.+.-+|..||+.+-....-...........+.+++.|+.|+.++.+|.+++ +.++.++-.... -..+..||+.
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tG--e~lW~~~l~~~~~a~P~ty~~dGkq 520 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDG--KELWNFKMPSGGIGSPMTYSFKGKQ 520 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCEEEECCCCCCEEEECCCCCCCCCCEEEECCCEEEEECCCCEEEEEECCCC--CEEEEEECCCCCEECCEEEEECCEE
T ss_conf 6178853677846427678999875605966997999778996999999998--6878998999965156489889999
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=94.46 E-value=0.079 Score=24.27 Aligned_cols=76 Identities=13% Similarity=0.092 Sum_probs=40.8
Q ss_pred EEEEECC----CCEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCC----CEEEEEECCCCCCE-EEC------CCCEE
Q ss_conf 9999149----998999721789777599996999838889713786----47798653999917-827------99599
Q 000316 1332 SVAVGQD----ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEE----VVNDICVLSSSGRI-ASC------DGTLH 1396 (1678)
Q Consensus 1332 svafspd----g~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~----~V~sI~fsp~~~~l-aS~------DgtIk 1396 (1678)
.+++.++ ..+++.++. |+.+.--|.++|+....+..... .+++--..-.+..+ ++. .|.|+
T Consensus 110 Gv~~~~~~~~~~~~v~~~t~----dg~l~Alda~tG~~~w~~~~~d~~~~~~~t~~P~v~~~~vivg~~~~e~~~~G~v~ 185 (596)
T d1w6sa_ 110 GLAYWPGDGKTPALILKTQL----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLT 185 (596)
T ss_dssp CCEEECCCSSSCCEEEEECT----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEE
T ss_pred EEEEECCCCCCCEEEEEEEC----CCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCEE
T ss_conf 16983279988629999807----98768543656841023101465556422458817777589930234443357328
Q ss_pred EEECCCCCEEEEECC
Q ss_conf 997999945699604
Q 000316 1397 VWNSQTGKLLSVFAE 1411 (1678)
Q Consensus 1397 IWD~~tg~~i~~l~~ 1411 (1678)
-+|+.||+.+..+..
T Consensus 186 A~Da~TG~~~W~~~t 200 (596)
T d1w6sa_ 186 AYDVKTGEQVWRAYA 200 (596)
T ss_dssp EEETTTCCEEEEEES
T ss_pred EEECCCCCEEEEEEC
T ss_conf 988788857788653
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=94.37 E-value=0.082 Score=24.14 Aligned_cols=74 Identities=12% Similarity=0.061 Sum_probs=40.9
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC---CEEEEEECCCE
Q ss_conf 92999968999299999315887699980899999999599939999869999888769505899---88999752999
Q 000316 1534 GQCRLFDVRSGNVIASWRAHDGYVTKLAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISGFSVWGQD 1609 (1678)
Q Consensus 1534 g~I~iWD~rtg~~i~~l~gH~~~V~sIaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~---~V~afSpdg~~ 1609 (1678)
|.+.-||..+|+.+-..+......-...+..+.+++.|+.|+.++.+|..++ +.++++.-... ....+..+|++
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TG--e~LW~~~~~~~~~~~P~ty~~~GkQ 533 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG--EKLWEAPTGTGVVAAPSTYMVDGRQ 533 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCEEEECCCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCEEEEEECCCC--CEEEEEECCCCCCCCCEEEEECCEE
T ss_conf 6178757877866705168898877607986998999779991999999988--6857998989945167799989999
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=94.11 E-value=0.092 Score=23.77 Aligned_cols=75 Identities=13% Similarity=0.138 Sum_probs=46.1
Q ss_pred CCEEEEECCCCCCCCCEEEECCCCCEE-EEEECCCEEEEEECCC-EEEEECCCCCCCCCCCEECCCEEEEEECCCCCC-C
Q ss_conf 939999869999888769505899889-9975299999994897-599956778897896100031023430698765-7
Q 000316 1575 KTLRIWDLRRNWPSQPTVFKGHTNGIS-GFSVWGQDVISISNNK-IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNL-S 1651 (1678)
Q Consensus 1575 gtI~IWDl~~~~~~~~~~l~gH~~~V~-afSpdg~~LaSgs~D~-I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~-~ 1651 (1678)
|.+.-||+.++ +.++..+....... .++..+.+++.|+.|+ ++.+|.. +|. .+|+...+.... .
T Consensus 457 G~l~AiD~~tG--k~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~-----TGe------~LW~~~~~~~~~~~ 523 (573)
T d1kb0a2 457 GRLLAWDPVAQ--KAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA-----TGE------KLWEAPTGTGVVAA 523 (573)
T ss_dssp EEEEEEETTTT--EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT-----TCC------EEEEEECSSCCCSC
T ss_pred CCEEEECCCCC--CEEEEECCCCCCCCCEEEECCCEEEEECCCCEEEEEECC-----CCC------EEEEEECCCCCCCC
T ss_conf 61787578778--667051688988776079869989997799919999999-----886------85799898994516
Q ss_pred CEEEEEEECCCCEE
Q ss_conf 48999994499899
Q 000316 1652 VLSSISILPFSRLF 1665 (1678)
Q Consensus 1652 ~I~siafsPd~~lL 1665 (1678)
+ +.+..++++.
T Consensus 524 P---~ty~~~GkQY 534 (573)
T d1kb0a2 524 P---STYMVDGRQY 534 (573)
T ss_dssp C---EEEEETTEEE
T ss_pred C---EEEEECCEEE
T ss_conf 7---7999899999
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.56 E-value=0.064 Score=24.90 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=27.1
Q ss_pred CCCEECCCCCCCEEECCCCCEEEEEEECCCCC
Q ss_conf 89220689989737557994159997268854
Q 000316 295 LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1678)
Q Consensus 295 ~~IiHRDLKP~NILl~~~g~~~iKI~DFGlar 326 (1678)
.|+||+|+.+.|++++.+. ..-|+||+.+.
T Consensus 183 ~giIHgDl~~dNvl~~~~~--v~gvIDF~~~~ 212 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDE--LSGLIDFYFAC 212 (316)
T ss_dssp EEEECSCCCGGGEEEETTE--EEEECCCTTCE
T ss_pred CCCCCCCCCHHHHHCCCCC--CEEEECCCCCC
T ss_conf 5033378636564020454--12674222123
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=92.62 E-value=0.15 Score=22.13 Aligned_cols=78 Identities=9% Similarity=0.093 Sum_probs=44.3
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEE-EECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC---CEEEEEECCCE
Q ss_conf 92999968999299999315887699-980899999999599939999869999888769505899---88999752999
Q 000316 1534 GQCRLFDVRSGNVIASWRAHDGYVTK-LAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISGFSVWGQD 1609 (1678)
Q Consensus 1534 g~I~iWD~rtg~~i~~l~gH~~~V~s-Iaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~---~V~afSpdg~~ 1609 (1678)
|.+.-||+.+|+.+-..... ....+ ..+-.+.+++.|+.||.++.+|..++ +.++.++-... ....+..+|+.
T Consensus 438 G~l~A~D~~tGk~~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~Da~tG--e~LW~~~l~~~~~~~P~ty~~dGkq 514 (560)
T d1kv9a2 438 GALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKG--EALWQFEAQSGIVAAPMTFELAGRQ 514 (560)
T ss_dssp EEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCEEEEECCCCEEEEECCCC-CCCCCCEEEECCCEEEEECCCCCEEEEECCCC--CEEEEEECCCCCCCCCEEEEECCEE
T ss_conf 64688707788373102578-88877405987998999778981999999998--5827998999955167799989999
Q ss_pred -EEEEE
Q ss_conf -99994
Q 000316 1610 -VISIS 1614 (1678)
Q Consensus 1610 -LaSgs 1614 (1678)
|+..+
T Consensus 515 yv~v~a 520 (560)
T d1kv9a2 515 YVAIMA 520 (560)
T ss_dssp EEEEEE
T ss_pred EEEEEE
T ss_conf 999991
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=91.54 E-value=0.2 Score=21.27 Aligned_cols=93 Identities=10% Similarity=0.087 Sum_probs=46.1
Q ss_pred EEEEECC-CC--EEEE-ECCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCCEEEEEEEC-CCCCEEEEEECCC
Q ss_conf 9999689-84--2689-4126664799999149998999721789777599996999838889713-7864779865399
Q 000316 1310 ESPWKIK-AS--ILSS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG-HEEVVNDICVLSS 1384 (1678)
Q Consensus 1310 v~lWd~~-g~--~l~t-l~gH~~~V~svafspdg~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~g-H~~~V~sI~fsp~ 1384 (1678)
+.+||.. +. .... -..|.......++.+++++++.|+.+ ..++.+||..+......-.. ....-.+++...+
T Consensus 54 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~---~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~d 130 (387)
T d1k3ia3 54 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND---AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD 130 (387)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS---TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT
T ss_pred EEEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCEEEEECCC---CCCEEEECCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 9999888896866677898744525689994688689863688---8621675675574421565664210130355317
Q ss_pred CCCEEEC--------CCCEEEEECCCCCE
Q ss_conf 9917827--------99599997999945
Q 000316 1385 SGRIASC--------DGTLHVWNSQTGKL 1405 (1678)
Q Consensus 1385 ~~~laS~--------DgtIkIWD~~tg~~ 1405 (1678)
+..++.. -..+.+||..+++-
T Consensus 131 G~v~v~GG~~~~~~~~~~v~~yd~~~~~W 159 (387)
T d1k3ia3 131 GRVFTIGGSWSGGVFEKNGEVYSPSSKTW 159 (387)
T ss_dssp SCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CCEEEECCCCCCCCCCCEEEEECCCCCCE
T ss_conf 82665213663335432056634888955
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=90.70 E-value=0.24 Score=20.71 Aligned_cols=286 Identities=14% Similarity=0.151 Sum_probs=134.2
Q ss_pred CEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCE-EEEEECC---CCCCEE-E------CCCCEEEEECCCCCEEEE
Q ss_conf 9899972178977759999699983888971378647-7986539---999178-2------799599997999945699
Q 000316 1340 CTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVV-NDICVLS---SSGRIA-S------CDGTLHVWNSQTGKLLSV 1408 (1678)
Q Consensus 1340 ~~LaSgs~d~~~DgtVrIWDl~tg~~l~tl~gH~~~V-~sI~fsp---~~~~la-S------~DgtIkIWD~~tg~~i~~ 1408 (1678)
..++.+.. |+.+...|..+|+.+.....+.... ..+.-.+ .+..+. + ..|.|.-+|.++|+.+..
T Consensus 118 ~~v~~~~~----~g~l~Alda~tG~~~w~~~~~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~ 193 (560)
T d1kv9a2 118 DKVYVGTL----DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (560)
T ss_dssp TEEEEECT----TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CEEEEEEC----CCEEEEEECCCCCEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCEECCCCCEEEEEECCCCEEEEE
T ss_conf 84999738----98799997778957730576675540454320045068510365311001355389997788627766
Q ss_pred ECCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEEC----------
Q ss_conf 6046766556689998753-----3345544433457777783786315983067676149979999978----------
Q 000316 1409 FAEQSMDSLHGGSPSSSIS-----KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG---------- 1473 (1678)
Q Consensus 1409 l~~~~~~~~~~~s~s~~~~-----~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~---------- 1473 (1678)
+..-...... +..... ............. .. .......+.+..+.+..+..
T Consensus 194 ~~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--G~---------~~W~~~s~D~~~~l~y~~tgn~~~~~~~~~ 259 (560)
T d1kv9a2 194 FYTVPGDPAL---PYEHPELREAAKTWQGDQYWKLGG--GG---------TVWDSMAYDPELDLLYVGTGNGSPWNREVR 259 (560)
T ss_dssp EESSCCCTTS---CCSSHHHHHHHTTCCSSCHHHHCE--EC---------CCCSCEEEETTTTEEEEECCCEESSCHHHH
T ss_pred EEECCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCC--CC---------CCCCCCCCCCCCCEEEECCCCCCCCCCCCC
T ss_conf 4100345567---764311223456666653100267--88---------755655214346803644788743555642
Q ss_pred ---------CCCEEEEECCCCEEEEEEECCCCCC-CCC----CCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEE
Q ss_conf ---------9919999888990358861799755-678----75107875089754458655799889999409929999
Q 000316 1474 ---------NGSLRFIDINQGQKLHLWRGEPTEL-GFP----SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLF 1539 (1678)
Q Consensus 1474 ---------DgtIkiWDl~tg~~i~~l~~~~~~v-~~~----~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iW 1539 (1678)
...|.-.|+++++....++...... .+. .....+.. ++ ..-..++.+..+|.++++
T Consensus 260 ~~~~g~n~~s~sivAld~~tG~~~W~~Q~~~~D~wd~d~~~~~~l~~~~~--------~g--~~~~~v~~~~k~G~~~~l 329 (560)
T d1kv9a2 260 SPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI--------DG--KPRKVLMQAPKNGFFYVL 329 (560)
T ss_dssp STTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE--------TT--EEEEEEEECCTTSEEEEE
T ss_pred CCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEC--------CC--CEEEEEEECCCCCEEEEE
T ss_conf 46677654530368733776421588710365332345651244200311--------79--602566625765369998
Q ss_pred ECCCCCEEEEEECCC-CCEE-----------------------------------EEE-CCCCCEEEEEEC---------
Q ss_conf 689992999993158-8769-----------------------------------998-089999999959---------
Q 000316 1540 DVRSGNVIASWRAHD-GYVT-----------------------------------KLA-APEDHLLVSSSL--------- 1573 (1678)
Q Consensus 1540 D~rtg~~i~~l~gH~-~~V~-----------------------------------sIa-spdg~~LaSgS~--------- 1573 (1678)
|..+|+++...+.-. .... ..+ .|+..++...+.
T Consensus 330 Dr~tG~~i~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yvp~~~~~~~~~~~ 409 (560)
T d1kv9a2 330 DRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNE 409 (560)
T ss_dssp ETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCC
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECC
T ss_conf 46888243534446544334557221321000123223355056535666545656316688871653510166200014
Q ss_pred ---------------------------CCCEEEEECCCCCCCCCEEEECCCCCEE-EEEECCCEEEEEECCC-EEEEECC
Q ss_conf ---------------------------9939999869999888769505899889-9975299999994897-5999567
Q 000316 1574 ---------------------------DKTLRIWDLRRNWPSQPTVFKGHTNGIS-GFSVWGQDVISISNNK-IGLSSLS 1624 (1678)
Q Consensus 1574 ---------------------------DgtI~IWDl~~~~~~~~~~l~gH~~~V~-afSpdg~~LaSgs~D~-I~iwdl~ 1624 (1678)
.|.+.-||+.++ +..+.......... .++-.+.+++.|+.|+ ++.+|..
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~G~l~A~D~~tG--k~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~ 487 (560)
T d1kv9a2 410 GKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQ--KAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (560)
T ss_dssp GGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTT--EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC--EEEEECCCCCCCCCCEEEECCCEEEEECCCCCEEEEECC
T ss_conf 666444444234667666667887666664688707788--373102578888774059879989997789819999999
Q ss_pred CCCCCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCE-EEEE
Q ss_conf 7889789610003102343069876574899999449989-9999
Q 000316 1625 KSADEDGQHRLVPQKLYMVDNGAKNLSVLSSISILPFSRL-FLVG 1668 (1678)
Q Consensus 1625 ~~~~~~g~~~~~~~kl~~~~~g~~h~~~I~siafsPd~~l-Latg 1668 (1678)
+|. .+|+...+....+. -+.+..+++. +++.
T Consensus 488 -----tGe------~LW~~~l~~~~~~~--P~ty~~dGkqyv~v~ 519 (560)
T d1kv9a2 488 -----KGE------ALWQFEAQSGIVAA--PMTFELAGRQYVAIM 519 (560)
T ss_dssp -----TCC------EEEEEECSSCCCSC--CEEEEETTEEEEEEE
T ss_pred -----CCC------EEEEEECCCCCCCC--CEEEEECCEEEEEEE
T ss_conf -----985------82799899995516--779998999999999
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=89.88 E-value=0.28 Score=20.24 Aligned_cols=286 Identities=11% Similarity=0.034 Sum_probs=129.4
Q ss_pred EEEEEEECCCCEEEEEECCCC-C--C----CEEEEEECCCCEEEE--E-EECCCCCEEEEEECCCCCCEEEC---CCCEE
Q ss_conf 799999149998999721789-7--7----759999699983888--9-71378647798653999917827---99599
Q 000316 1330 LRSVAVGQDECTVFTAGIGPG-F--K----GTVQKWELTRINCVS--G-YYGHEEVVNDICVLSSSGRIASC---DGTLH 1396 (1678)
Q Consensus 1330 V~svafspdg~~LaSgs~d~~-~--D----gtVrIWDl~tg~~l~--t-l~gH~~~V~sI~fsp~~~~laS~---DgtIk 1396 (1678)
+.......+|+.++-||.++. + + ..+.+||..+++... . -..|.....+.++.+++..++.+ ..++.
T Consensus 22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~ 101 (387)
T d1k3ia3 22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 101 (387)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred CEEEEEEECCEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCEE
T ss_conf 17899925999999984057666788776068999988889686667789874452568999468868986368886216
Q ss_pred EEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCEEEEEECC--
Q ss_conf 997999945699604676655668999875333455444334577777837863159830676761499799999789--
Q 000316 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN-- 1474 (1678)
Q Consensus 1397 IWD~~tg~~i~~l~~~~~~~~~~~s~s~~~~~~~~~~~~~~~~~~~s~~i~sv~f~~~~vt~ia~sp~g~~Lvsgs~D-- 1474 (1678)
+||..+..-...-.... +...-..+...+++.++.|+.+
T Consensus 102 ~yd~~~~~w~~~~~~~~---------------------------------------~r~~~~~~~~~dG~v~v~GG~~~~ 142 (387)
T d1k3ia3 102 LYDSSSDSWIPGPDMQV---------------------------------------ARGYQSSATMSDGRVFTIGGSWSG 142 (387)
T ss_dssp EEEGGGTEEEECCCCSS---------------------------------------CCSSCEEEECTTSCEEEECCCCCS
T ss_pred EECCCCCCCCCCCCCCC---------------------------------------CCCCCCEEEECCCCEEEECCCCCC
T ss_conf 75675574421565664---------------------------------------210130355317826652136633
Q ss_pred ----CCEEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEE
Q ss_conf ----9199998889903588617997556787510787508975445865579988999940992999968999299999
Q 000316 1475 ----GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1678)
Q Consensus 1475 ----gtIkiWDl~tg~~i~~l~~~~~~v~~~~~V~~ia~~~~~~~s~dg~~p~g~~LasGs~Dg~I~iWD~rtg~~i~~l 1550 (1678)
..+.+||..+.+-.. +...............+.......+... .++|..+..|..++.+..+|..+......-
T Consensus 143 ~~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~ 219 (387)
T d1k3ia3 143 GVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRSDNHAWLFG--WKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 219 (387)
T ss_dssp SSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTTTCSCCEEE--CGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred CCCCCEEEEECCCCCCEEE-CCCCCCCCCCCCCCCCEEECCCEEEEEE--ECCCCEEEECCCCCCEEECCCCCCCEEECC
T ss_conf 3543205663488895511-5887644311346651365042269997--079877874686774781486667173166
Q ss_pred E--CCC------CCEEEEE--CCCCCEEEEEECCC--------CEEEEECCCCCCCC-CEEEEC----CC-CCEEEEEEC
Q ss_conf 3--158------8769998--08999999995999--------39999869999888-769505----89-988999752
Q 000316 1551 R--AHD------GYVTKLA--APEDHLLVSSSLDK--------TLRIWDLRRNWPSQ-PTVFKG----HT-NGISGFSVW 1606 (1678)
Q Consensus 1551 ~--gH~------~~V~sIa--spdg~~LaSgS~Dg--------tI~IWDl~~~~~~~-~~~l~g----H~-~~V~afSpd 1606 (1678)
. ... ..-.++. ..++++++.|+... ...+.++....... ...... .. ..-....++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~d 299 (387)
T d1k3ia3 220 KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPD 299 (387)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTT
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCC
T ss_conf 55667665763222637886135882478875367887752100000111113567884060366566543433566058
Q ss_pred CCEEEEEECCC------------EEEEECCCCCCCCCCCEECCCEEEEEECCCCCCC-CEEEEEEECCCCEEEEEEC
Q ss_conf 99999994897------------5999567788978961000310234306987657-4899999449989999948
Q 000316 1607 GQDVISISNNK------------IGLSSLSKSADEDGQHRLVPQKLYMVDNGAKNLS-VLSSISILPFSRLFLVGTE 1670 (1678)
Q Consensus 1607 g~~LaSgs~D~------------I~iwdl~~~~~~~g~~~~~~~kl~~~~~g~~h~~-~I~siafsPd~~lLatgs~ 1670 (1678)
++.++.|+.+. +.+||.. ...|.......... .=......+|+++|+.|+.
T Consensus 300 g~i~v~GG~~~~~~~~~~~~~~~ve~Ydp~-------------~~~W~~~~~~~~~R~~Hs~a~l~~dG~v~v~GG~ 363 (387)
T d1k3ia3 300 GSTFITGGQRRGIPFEDSTPVFTPEIYVPE-------------QDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 363 (387)
T ss_dssp SCEEEECCBSBCCTTCCCSBCCCCEEEEGG-------------GTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CEEEEECCCCCCCCCCCCCEECEEEEEECC-------------CCEEEECCCCCCCCCCEEEEEECCCCEEEEEECC
T ss_conf 749998884567668899470107989799-------------9918878899975531279999889999999698
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=87.65 E-value=0.39 Score=19.20 Aligned_cols=77 Identities=18% Similarity=0.094 Sum_probs=49.8
Q ss_pred CEEEEEECCCCCEEEEEECCCCCEEE-EECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEECCCC---CEEEEEECCCE
Q ss_conf 92999968999299999315887699-980899999999599939999869999888769505899---88999752999
Q 000316 1534 GQCRLFDVRSGNVIASWRAHDGYVTK-LAAPEDHLLVSSSLDKTLRIWDLRRNWPSQPTVFKGHTN---GISGFSVWGQD 1609 (1678)
Q Consensus 1534 g~I~iWD~rtg~~i~~l~gH~~~V~s-Iaspdg~~LaSgS~DgtI~IWDl~~~~~~~~~~l~gH~~---~V~afSpdg~~ 1609 (1678)
|.+.-||..+|+.+-.... ...+.+ ..+..+.+++.|+.||.++.+|..++ +.++.+.-... ....+..+|+.
T Consensus 453 G~l~A~D~~TG~~~W~~~~-~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TG--e~LW~~~~~~~~~a~P~tY~~dGkQ 529 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTG--DLLWKFKIPSGAIGYPMTYTHKGTQ 529 (596)
T ss_dssp EEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CEEEEEECCCCCEECCCCC-CCCCCCCEEEECCCEEEEECCCCEEEEEECCCC--CEEEEEECCCCCCCCCEEEEECCEE
T ss_conf 5389980788856233278-888744146866997999789995999999998--4836998999954077689989999
Q ss_pred -EEEE
Q ss_conf -9999
Q 000316 1610 -VISI 1613 (1678)
Q Consensus 1610 -LaSg 1613 (1678)
++..
T Consensus 530 Yvav~ 534 (596)
T d1w6sa_ 530 YVAIY 534 (596)
T ss_dssp EEEEE
T ss_pred EEEEE
T ss_conf 99999
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.84 E-value=0.35 Score=19.57 Aligned_cols=25 Identities=24% Similarity=0.438 Sum_probs=10.3
Q ss_pred HHHHHHHHHHCHHHHHHHHHHHHHH
Q ss_conf 9999999983623678735699999
Q 000316 1097 STLMAICQRIGPDLTALHVLPHLKE 1121 (1678)
Q Consensus 1097 ~~~~~~~~r~g~~~~~~~~~~~l~~ 1121 (1678)
.++..+..-.+++....+++|.+.+
T Consensus 502 ~~l~~l~~~~~~~~~~~~ilp~ll~ 526 (588)
T d1b3ua_ 502 FCINVLSEVCGQDITTKHMLPTVLR 526 (588)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 9999999986968789999999998
|