Citrus Sinensis ID: 000374

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------161

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKFGSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR

cccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHHHccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccccc

cHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccHHHHHcHHHcHHHHHHcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccccEcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHcHHHHHHHHHHHHHccHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccHHHcccccccccccccccHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcccccccccHHHHccccccccccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHccccccccccHHHccHHHHHHHHHHHHHHHHccccccHHHcccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcccccccHccccccccccccHHHHHHHHHHHHccccccccccccHHcccccccHHHHHcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccHHHHccccHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccEEEEcccc

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLrslsspselaqSEDILRIFLMACEVRTVKLSVIGLSCIQKLishdavapSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQsrlhpenedNMAQALGICLRLLennrssdsvrNTAAATFRQAVALIFDHVVraeslpmgkfgsgahitrtnsvtgdvsrsinhseslehefasegpslrRETLTKAGKLGLRLLEDLTALAaggsaswlhvNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLrtnvenegetgepyfRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVtfldlplwHRILVLEILRGFCVEARTLRLLFQnfdmnpkntnVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTdeavdvgelesprcdydplpkcmgeTAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTinipnesdrrsavlqspgskrseslvdqkdnivltpkNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDraihsphattqeVSTASSKlaressgqysdfnVLSSLNSQLFESSALMHISAVKSLLSALHQLSHqcmigtsssfgptssqkigsISFSVERMISILVNNlhrveplwDQVVGHFLELADNSNQHLRNIALDALDQSICAVlgsekfqdsasrqrgtsdercgeklhyswPSILELLRSVADASEKDLITLGFQSLRFIMNdglssiptdcihecvdvtgayssqktELNISLTAVGLLWTTTDFIAKGLVHgiseekeaanqdlcsvpkqmdgekreektlsnlddqnhsigmvdrDKLLFAVFSLLKKlgaderpevRNSAIRTLFQTLGShgqklsesmwEDCLWnyvfpmldcashmaatsskdewqgkelgtrggKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVlshstkgnlpvayLNSVLDVYEYAlqkspnysdnaagKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTmithdnyeiefghvppVLRTILEIlpllspteQLCSMWLVLLREILQylprsdsplqkkedeeeppstsdnihdvhvrtkydkpngtapttpkdasalsessgsvtaaipnhlfaeKLIPVVVDLFLkapavekciiFPEIIQNLGrcmttrrdnpdssLWRLAVEGFNHILVDDVTKLAANFWQdmkisrparLRVWKEVADVYEIFLVGYcgralpsnslsAVALSGADESLEMSILDILGdkilkspidapFDVLQRLISTIDRcasrtcslpvetvelmpahcskFSLACLHKlfslsssdneasKWNLTRAEVSKISITVLMGRCEYILNRFlidendlgernfpaARLEEIIFILQELARlkihpdtasalplhpvlksglamdensdkrphllvlFPSFCELVISREARVRELVQVLLRLITKELALEKASMAGGR

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILklrslsspselAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESlpmgkfgsgahitrtnsvtgdVSRSINHSESLehefasegpslrrETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSlrtnvenegetgepyfrRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLfqnfdmnpkNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDeavdvgelesprcdydplPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVlqspgskrseslvdqkdnivLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHsphattqevstaSSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIgtsssfgptssQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGsekfqdsasrqrgtsdercgekLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEekeaanqdlcsvpkqmdgekreektlsnlddqnhsigmvdRDKLLFAVFSLLKklgaderpevRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSrntaqkqwDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLprsdsplqkkedeeeppstsdnihdvhvrTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDmkisrparlrvWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITkelalekasmaggr

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKFGSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFNVLSSLNSQLFESSALMHISAVKsllsalhqlshqCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISrearvrelvqvllrlITKELALEKASMAGGR

************************************************EDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLEN******VRNTAAATFRQAVALIFDHVVRAESLPMGKFGS******************************************AGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQF*********AVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINI***************************NIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAI*****************************VL**LNSQLFESSALMHISAVKSLLSALHQLSHQCMIGT***********IGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLG*******************GEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGI*************************************IGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAA***********LGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYL********************************************************TAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSS***EASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSG**********PHLLVLFPSFCELVISREARVRELVQVLLRLITKELAL*********

*ALMAVLESDLRA****************EHAILKLRS********Q*EDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLE*************ATFRQAVALIFDHV*****************************************************TKAGKLGLRLLEDLTA*************TLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSS****************************LDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVD****************CMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIP****************************VLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDR*********************************************LMHISAVKSLLSALHQLSHQC********************FSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAK**************************************DQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASH***************GTRGGK**************KQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHST**NLPVAYLNSVLDVYEYALQKSPNY*********QEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTM***********HVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQ*************NIHDVHVRTKYDKPNGTAPT*********ESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANF****KISRPARLRVWKEVADVYEIFLVGYCGRAL****L*AVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCS****TVELMPAHCSKFSLACLHKLFSLS**************EVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKI***************************PHLLVLFPSFCELVISREARVRELVQVLLRLITKELA**********

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKFGSGAHITRTNSVTGDVSRSINH****************RETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVS***********LSAVAGMFSSKAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESD*****************VDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPH********************YSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTS*********KIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEK***************CGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPK***********LSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDS***************DNIHDVHVRTKYDKPNG******************VTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALE********

MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAES*********************************************ETLTKAGKLGLRLLEDLTALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSV********************AKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGE*E*********PKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIP*************************DNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPH********************YSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQDSASRQRGTSDERCGEKLHYSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGL************************************DQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCAS**********************AVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSKFSLACLHKLFSLSSSDNEA**WNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVLLRLITKELALEKASMA***

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1608	2.2.26 [Sep-21-2011]
Q6GP04		1721	Protein MON2 homolog OS=X	N/A	no	0.632	0.590	0.272	1e-102
Q80TL7		1715	Protein MON2 homolog OS=M	yes	no	0.631	0.592	0.277	1e-100
Q9VLT1		1684	Protein MON2 homolog OS=D	yes	no	0.623	0.595	0.267	4e-99
Q29L43		1701	Protein MON2 homolog OS=D	yes	no	0.635	0.600	0.260	3e-98
Q7Z3U7		1718	Protein MON2 homolog OS=H	yes	no	0.345	0.323	0.291	6e-59
Q19338		1646	Monensin-resistant homolo	yes	no	0.273	0.267	0.244	5e-35
Q61SD1		1645	Protein MON2 homolog OS=C	N/A	no	0.273	0.267	0.244	2e-33
P48563		1636	Protein MON2 OS=Saccharom	yes	no	0.662	0.651	0.203	1e-25
F4IXW2		1739	Brefeldin A-inhibited gua	no	no	0.266	0.246	0.233	1e-22
Q09853		1616	Protein MON2 homolog OS=S	yes	no	0.402	0.400	0.221	6e-19

>sp\|Q6GP04\|MON2_XENLA Protein MON2 homolog OS=Xenopus laevis GN=mon2 PE=2 SV=1	Back alignment and function desciption

 Score =  372 bits (956), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 333/1222 (27%), Positives = 564/1222 (46%), Gaps = 205/1222 (16%)

Query: 3    LMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLS--SPSELA----QSEDILRIFL 56
            L+  ++SDLR LS E ++++P VK+ AE  I+K+++++  SP  L      S ++++ FL
Sbjct: 16   LLDNMQSDLRGLSMECKKKFPPVKEAAESGIVKVKNIAARSPDVLTALKENSSEVVQPFL 75

Query: 57   MACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILI 116
            M C  +  K++ + L+ IQ+L+SH+ V+  A   I +ML    +   E ++L     +L+
Sbjct: 76   MGCGTKEQKITQLCLAAIQRLMSHEVVSEGAAGNIINMLWQLMENGLEELKLLQTVLVLL 135

Query: 117  IFQSRLHPENEDNMAQALGICLRLLENNRSSDSV-RNTAAATFRQAVALIFDHVVRAESL 175
               + +H   ++++++A+ +C RL   + + D++  NTAAAT RQ V ++F+ +V  +  
Sbjct: 136  TTNTVVH---DESLSKAIVLCFRL---HFTKDNITNNTAAATVRQVVTVVFERMVTEDE- 188

Query: 176  PMGKFGSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRE--TLTKAGKLGLRLL 233
                                      H +++E      G S RR   TL    K    L 
Sbjct: 189  -------------------------RHKDAVEQPIPVTGNSNRRSVSTLKPCAKDAYMLF 223

Query: 234  EDLTALAAGGSASWL-HVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLM 292
            +DL  L    +  WL  +  + RTF L++LE +L++   +F     +  +L+ ++C L++
Sbjct: 224  QDLCQLVNADAPYWLVGMTEMTRTFGLELLESVLNDFPQVFLQHQEFSFLLKERVCPLVI 283

Query: 293  TSLRTNVE---------NEGETGEPYF---RRLVLRSVAHIIRLYSSSLITECEVFLSML 340
                 N++         +     +PYF    RL LR V+ +I+ + S L+TECE+FLS+L
Sbjct: 284  KLFSPNIKFRQGSNSNSSPAPVEKPYFPICMRL-LRVVSVLIKQFYSLLVTECEIFLSLL 342

Query: 341  VKVTFLDLPLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSS 400
            VK    D P W R + +E +   CV+ + LR   Q++DM   +T V   +V AL   + S
Sbjct: 343  VKFLDADKPQWLRAVAVESIHRLCVQPQLLRSFCQSYDMKQHSTKVFRDIVNALGSFIQS 402

Query: 401  VQF-----------------QETSEESLSAVAGMFSSKAKGI---------EWI----LD 430
            +                      +  S    +GM ++ +             WI    + 
Sbjct: 403  LFLIPSAGPASATTNPPGGSSSITPASNPTTSGMATATSNTTVLPAFEYRGTWIPILTIS 462

Query: 431  NDASNAAVLVA----------SEAHSITLAIEGLLGVVFTVATLTDEAVDVGELES---- 476
               S  A  +            E +++++A   LL +V  + T+ +  +   E +S    
Sbjct: 463  IQGSAKATYLEMLDKVEPPTIPEGYALSVAFHCLLDLVRGITTMIEGEIGQAETDSHISA 522

Query: 477  -------PRCDYDPLPKCMGETAVLCIS----MVDSLWLTILDALSLILSRSQGEAIILE 525
                   P  +   LP         C S    M+++ W  +L ALSL+L  S  E     
Sbjct: 523  EETPSHAPTINPQELPAVSDPADKGCRSVWEEMINACWCGLLAALSLLLDASTDETATEN 582

Query: 526  ILKGYQAFTQACGVLHAVEPLNSFLASLCK------FTINIPNESD----RRSAVLQ--- 572
            ILK        CG L  V P ++F+ ++CK      + + + N S      +S  +Q   
Sbjct: 583  ILKAEMTMASLCGKLGLVTPRDAFITAICKGSLPPHYALTVLNTSSAAICNKSYSIQGQN 642

Query: 573  ----SPGSKRSESL--------VDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLV 620
                SP S   + +        V  +  ++LT KN+Q +RTL N+AH     LG SW LV
Sbjct: 643  VQMISPSSDSHQQVVAVGQPLAVQPQGTVMLTAKNIQCMRTLLNLAHCHGGFLGTSWQLV 702

Query: 621  LETLAALDRAIHSPHATTQEVSTASSKLARESSGQ--------YSDFNVLSSLNSQLFES 672
            L TL  L   +       +  S  + K  R   G          +D  ++S++ S+LFES
Sbjct: 703  LATLQHLVWIL-----GLKPSSGGALKPGRAVEGPSTVLTTAVMTDLPIISNILSRLFES 757

Query: 673  SALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVERMISILVNNLHRV 732
            S  +   ++  L++AL  LS + M     ++G      +    F+V +++   + N+HR+
Sbjct: 758  SQYLDDVSLHHLINALCSLSLEAM---DMAYGNNKEPSL----FAVAKLLETGLVNMHRI 810

Query: 733  EPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLG-------SEKFQDSASRQRGT 785
            E LW  + GH +E+  + N  +R    +AL   I A L        SE  +         
Sbjct: 811  EILWRPLTGHLIEVCQHPNARMREWGAEALTSLIKAGLDFKHEPQLSENQRLQLLLLNPL 870

Query: 786  S--------DER-----C--------GEKLHYSWPSILELLRSVADASEKDLITLGFQSL 824
                     D R     C        G+ L   WP +L ++ ++ +   + LI   FQ L
Sbjct: 871  KELSNIIHHDIRLKQLECVLQILQSQGDSLGPGWPLVLGVIGAIRNDQGESLIRNAFQCL 930

Query: 825  RFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISE 884
            + ++ D L ++P+ C+   V+V G++  Q  ELNISLT++GLLW  +D+  +    G + 
Sbjct: 931  QLVVTDFLPTMPSTCLQIVVEVAGSFGLQNQELNISLTSIGLLWNISDYFYQ---RGETI 987

Query: 885  EKE-AANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLLFAVFSLLKKLGADE 943
            EKE    +DL      +  + +E+  +  L+   H       D L   +++ L +L  D 
Sbjct: 988  EKELNLEEDL------LQKQAKEKGII--LNRPFHPAPPF--DCLWLCLYAKLGELCVDI 1037

Query: 944  RPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKEL 1003
            RP VR SA +TLF T+G+HG  L  + W   +W  +F +L+     + T+ K+     ++
Sbjct: 1038 RPAVRKSAGQTLFSTIGAHGTLLQHATWHTVIWKVLFQLLNQVRESSTTADKE-----KI 1092

Query: 1004 GTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLH 1063
             + GG   ++LIHHSR+TA+KQW ET VL L G+AR+  +    L  L  F   W+ LL 
Sbjct: 1093 ESGGG---NILIHHSRDTAEKQWAETWVLTLAGVARIFNTRRYLLQPLGEFTKAWDVLLD 1149

Query: 1064 FVKNSILNGSKEVSLAAINCLQ 1085
             ++++ L+ S EVSLAA+   Q
Sbjct: 1150 HIQSAALSKSNEVSLAALKSFQ 1171

May be required for traffic between late Golgi and early endosomes.
Xenopus laevis (taxid: 8355)

>sp\|Q80TL7\|MON2_MOUSE Protein MON2 homolog OS=Mus musculus GN=Mon2 PE=2 SV=2	Back alignment and function description

>sp\|Q9VLT1\|MON2_DROME Protein MON2 homolog OS=Drosophila melanogaster GN=mon2 PE=2 SV=4	Back alignment and function description

>sp\|Q29L43\|MON2_DROPS Protein MON2 homolog OS=Drosophila pseudoobscura pseudoobscura GN=mon2 PE=3 SV=2	Back alignment and function description

>sp\|Q7Z3U7\|MON2_HUMAN Protein MON2 homolog OS=Homo sapiens GN=MON2 PE=1 SV=2	Back alignment and function description

>sp\|Q19338\|MON2_CAEEL Monensin-resistant homolog 2 OS=Caenorhabditis elegans GN=mon-2 PE=3 SV=2	Back alignment and function description

>sp\|Q61SD1\|MON2_CAEBR Protein MON2 homolog OS=Caenorhabditis briggsae GN=CBG06228 PE=3 SV=1	Back alignment and function description

>sp\|P48563\|MON2_YEAST Protein MON2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MON2 PE=1 SV=1	Back alignment and function description

>sp\|F4IXW2\|BIG5_ARATH Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana GN=BIG5 PE=1 SV=2	Back alignment and function description

>sp\|Q09853\|MON2_SCHPO Protein MON2 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mon2 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1608
359487909		1628	PREDICTED: protein MON2 homolog [Vitis v	0.978	0.966	0.784	0.0
298204915		1679	unnamed protein product [Vitis vinifera]	0.973	0.932	0.751	0.0
356535141		1643	PREDICTED: protein MON2 homolog isoform	0.976	0.956	0.749	0.0
356574904		1644	PREDICTED: protein MON2 homolog [Glycine	0.982	0.961	0.749	0.0
255542394		1591	guanine nucleotide-exchange, putative [R	0.953	0.964	0.735	0.0
356535139		1589	PREDICTED: protein MON2 homolog isoform	0.952	0.964	0.717	0.0
224125556		1638	predicted protein [Populus trichocarpa]	0.945	0.928	0.700	0.0
449435760		1589	PREDICTED: LOW QUALITY PROTEIN: protein	0.953	0.965	0.699	0.0
334187989		1630	armadillo/beta-catenin-like repeat-conta	0.976	0.963	0.702	0.0
334187991		1658	armadillo/beta-catenin-like repeat-conta	0.975	0.946	0.702	0.0

>gi\|359487909\|ref\|XP_003633673.1\| PREDICTED: protein MON2 homolog [Vitis vinifera]	Back alignment and taxonomy information

 Score = 2561 bits (6637), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1295/1650 (78%), Positives = 1418/1650 (85%), Gaps = 76/1650 (4%)

Query: 1    MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSELAQSEDILRIFLMACE 60
            MA MAVLESDLRALSAEARRRYPAVKDGAEH ILKLRSLSSPSE+A +EDILRIFLMACE
Sbjct: 1    MAFMAVLESDLRALSAEARRRYPAVKDGAEHGILKLRSLSSPSEIAHNEDILRIFLMACE 60

Query: 61   VRTVKLSVIGLSCIQKLISHDAVAPSALKEIFSMLKNHADMVDESVQLKTLQTILIIFQS 120
            VR VKLSVIGLSC+QKLISHDAVAPSALKEI S LK+HA+M DESVQLKTLQTILII+QS
Sbjct: 61   VRNVKLSVIGLSCLQKLISHDAVAPSALKEILSTLKDHAEMADESVQLKTLQTILIIYQS 120

Query: 121  RLHPENEDNMAQALGICLRLLENNRSSDSVRNTAAATFRQAVALIFDHVVRAESLPMGKF 180
            RLHPENEDNMAQ LGICLRLLENNRSSDSVRNTAAATFRQAVAL+FDH+V AESLP+GKF
Sbjct: 121  RLHPENEDNMAQGLGICLRLLENNRSSDSVRNTAAATFRQAVALVFDHMVCAESLPLGKF 180

Query: 181  GSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLEDLTALA 240
            GSG +I+RT+SVTGD++R+IN SESLE+EF S  PSL RETLTKAGKLGLRLLEDLTALA
Sbjct: 181  GSGGYISRTSSVTGDINRNINRSESLEYEFISGRPSLMRETLTKAGKLGLRLLEDLTALA 240

Query: 241  AGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYEQVLRHQICSLLMTSLRTNVE 300
            AGGSA WL VN++QRTF LDILEF+LSN+V +FR LVSYEQVLRHQICSLLMTSLRTN E
Sbjct: 241  AGGSAIWLRVNSIQRTFALDILEFVLSNYVVVFRTLVSYEQVLRHQICSLLMTSLRTNAE 300

Query: 301  NEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEIL 360
             EGE GEP FRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVT LDLPLWHRILVLEIL
Sbjct: 301  VEGEAGEPSFRRLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTSLDLPLWHRILVLEIL 360

Query: 361  RGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQFQETSEESLSAVAGMFSS 420
            RGFCVEARTLR+LFQNFDM+PKNTNVVEGMVKALARVVSS+Q QETSEESL+AVAGMFSS
Sbjct: 361  RGFCVEARTLRILFQNFDMHPKNTNVVEGMVKALARVVSSLQVQETSEESLTAVAGMFSS 420

Query: 421  KAKGIEWILDNDASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCD 480
            KAKGIEW LDNDASNAAVLVASEAH+ITLA+EGLLGVVFTVATLTDEAVDVGELESPRCD
Sbjct: 421  KAKGIEWSLDNDASNAAVLVASEAHAITLAVEGLLGVVFTVATLTDEAVDVGELESPRCD 480

Query: 481  YDPLPKCMGETAVLCISMVDSLWLTILDALSLILSRSQGEAIILEILKGYQAFTQACGVL 540
             DP  KC G+TAVLCISMVDSLWLTILDALSLILSRSQGEAI+LEILKGYQAFTQACGVL
Sbjct: 481  SDPPAKCTGKTAVLCISMVDSLWLTILDALSLILSRSQGEAIVLEILKGYQAFTQACGVL 540

Query: 541  HAVEPLNSFLASLCKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQALR 600
             A+EPLNSFLASLCKFTINIP+E +RRS  LQSPGS+RSE LVDQ+D+IVLTPKNVQALR
Sbjct: 541  RAIEPLNSFLASLCKFTINIPSEVERRSNALQSPGSRRSEPLVDQRDSIVLTPKNVQALR 600

Query: 601  TLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKLARESSGQYSDFN 660
            TLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHA TQEVS    KL RESSGQYSD +
Sbjct: 601  TLFNIAHRLHNVLGPSWVLVLETLAALDRAIHSPHAATQEVSATVPKLTRESSGQYSDLS 660

Query: 661  VLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSISFSVER 720
            VLSSLNSQLFESSALMHISAVKSLL AL +LSHQC+ GTSS FG  S+QK+GSISFSVER
Sbjct: 661  VLSSLNSQLFESSALMHISAVKSLLCALCELSHQCIPGTSSVFGQASNQKVGSISFSVER 720

Query: 721  MISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICAVLGSEKFQD--- 777
            MISILVNNLHRVEPLWDQVV +FLEL ++SNQHLRN+ALDALDQSICAVLGS++FQ+   
Sbjct: 721  MISILVNNLHRVEPLWDQVVTYFLELTNSSNQHLRNMALDALDQSICAVLGSDRFQEYIP 780

Query: 778  ----SASRQRGTSD--------------------------------------ERCGEKLH 795
                SAS    T +                                      ER GEKLH
Sbjct: 781  SKAHSASHDMETINSELRSLECAVISPLRVLYFSSQITDGRVGALKILLHVLERHGEKLH 840

Query: 796  YSWPSILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKT 855
            YSWP ILE+LR VADASEKDL+TLGFQSLR IMNDGLS+IP DC+H C+DVTGAYS+QKT
Sbjct: 841  YSWPDILEMLRCVADASEKDLVTLGFQSLRVIMNDGLSTIPADCLHVCIDVTGAYSAQKT 900

Query: 856  ELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLS---N 912
            ELNISLTA+GLLWTTTDFIAKGL+HG  +E E    D+ S PKQMDGE++EEKTL+    
Sbjct: 901  ELNISLTAIGLLWTTTDFIAKGLLHGPPKETEI--MDMSSTPKQMDGERKEEKTLNFADK 958

Query: 913  LDDQNHSIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWE 972
             DDQ+  +  V+RD+LLF+VFSLL+KLGADERPEVRNSAIRTLFQTLG HGQKLS+SMWE
Sbjct: 959  FDDQSPLMNSVNRDRLLFSVFSLLQKLGADERPEVRNSAIRTLFQTLGGHGQKLSKSMWE 1018

Query: 973  DCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVL 1032
            DCLWNYVFP+LD ASHMA TSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVL
Sbjct: 1019 DCLWNYVFPILDRASHMAETSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVL 1078

Query: 1033 VLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHS 1092
            VLGGIARLLRSFFPFL +LSNF TGWESLL FVKNSILNGSKEV+LAAINCLQTTV SHS
Sbjct: 1079 VLGGIARLLRSFFPFLRSLSNFSTGWESLLLFVKNSILNGSKEVALAAINCLQTTVNSHS 1138

Query: 1093 TKGNLPVAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYG 1152
            +KGNLP+ YL SVLDVYE  LQKSPNYSDNAA KVKQEILHGLGELYVQAQ MFDD  Y 
Sbjct: 1139 SKGNLPMPYLQSVLDVYETVLQKSPNYSDNAASKVKQEILHGLGELYVQAQMMFDDGTYT 1198

Query: 1153 QLLAIIDLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQ 1212
            QLLAII L V+Q+ + +DN+E+E+GHVPPV R +LEILPLL P   L +MWL+LLRE+LQ
Sbjct: 1199 QLLAIIRLVVKQSKMNNDNFEVEYGHVPPVQRMMLEILPLLRPAVHLPAMWLLLLRELLQ 1258

Query: 1213 YLPRSDSPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSE-SSGSVT 1271
            YLPR DSP   KED E+      N                      +AS+LS  S+ S+ 
Sbjct: 1259 YLPRPDSP---KEDNEDGAEMMIN--------------------KTEASSLSAGSTTSIM 1295

Query: 1272 AAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVE 1331
            A IP++LFAEKLIPV+VDLFL+APAVEK  IFPEI+Q L RCMTTRRD+PD +LWR AVE
Sbjct: 1296 AGIPSYLFAEKLIPVLVDLFLQAPAVEKYSIFPEIVQGLSRCMTTRRDSPDGTLWRSAVE 1355

Query: 1332 GFNHILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVA 1391
            GFN+I++DDV KLA NF  D  IS+PAR+RVWKEVADVYEIFLVGYCGRALPS SLS +A
Sbjct: 1356 GFNNIVLDDVNKLAVNFGPDPSISKPARMRVWKEVADVYEIFLVGYCGRALPSKSLSDMA 1415

Query: 1392 LSGADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAH 1451
            L  ADESLEM+IL+ILGDKIL++ IDAP D+LQRL+ T+D CASRTCSL +ETVELMP+H
Sbjct: 1416 LK-ADESLEMTILNILGDKILQAQIDAPVDILQRLVLTLDHCASRTCSLRIETVELMPSH 1474

Query: 1452 CSKFSLACLHKLFSLSSSDNEASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGE 1511
            CS+FSL CL KLFSLSS + EA+ WN TR+EVSKISI VLM RCE ILNRFLIDEN+LGE
Sbjct: 1475 CSRFSLTCLQKLFSLSSYNGEANDWNSTRSEVSKISIMVLMTRCEQILNRFLIDENELGE 1534

Query: 1512 RNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSGLAMDENSDKRPHLLVLFPSF 1571
            R  P ARLEEIIF+L+ELARL IHP+TAS LPLHP LK GLA +EN D+RPHLLVLF SF
Sbjct: 1535 RPLPTARLEEIIFVLKELARLVIHPETASVLPLHPYLKGGLA-EENHDRRPHLLVLFASF 1593

Query: 1572 CELVISREARVRELVQVLLRLITKELALEK 1601
            CELVISREARVRELVQVLLRLI  EL+L+K
Sbjct: 1594 CELVISREARVRELVQVLLRLIAAELSLQK 1623

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|298204915\|emb\|CBI34222.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356535141\|ref\|XP_003536107.1\| PREDICTED: protein MON2 homolog isoform 2 [Glycine max]	Back alignment and taxonomy information

>gi\|356574904\|ref\|XP_003555583.1\| PREDICTED: protein MON2 homolog [Glycine max]	Back alignment and taxonomy information

>gi\|255542394\|ref\|XP_002512260.1\| guanine nucleotide-exchange, putative [Ricinus communis] gi\|223548221\|gb\|EEF49712.1\| guanine nucleotide-exchange, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356535139\|ref\|XP_003536106.1\| PREDICTED: protein MON2 homolog isoform 1 [Glycine max]	Back alignment and taxonomy information

>gi\|224125556\|ref\|XP_002319615.1\| predicted protein [Populus trichocarpa] gi\|222857991\|gb\|EEE95538.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449435760\|ref\|XP_004135662.1\| PREDICTED: LOW QUALITY PROTEIN: protein MON2 homolog [Cucumis sativus]	Back alignment and taxonomy information

>gi\|334187989\|ref\|NP_198149.2\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332006370\|gb\|AED93753.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|334187991\|ref\|NP_001190414.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] gi\|332006371\|gb\|AED93754.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1608
UNIPROTKB\|Q0JIX0		1267	Os01g0772700 "Os01g0772700 pro	0.373	0.474	0.566	0.0
DICTYBASE\|DDB_G0271398		1874	mon2 "unknown" [Dictyostelium	0.231	0.198	0.291	4e-105
UNIPROTKB\|Q29L43		1701	mon2 "Protein MON2 homolog" [D	0.228	0.216	0.267	4.6e-94
FB\|FBgn0031985		1684	mon2 [Drosophila melanogaster	0.224	0.214	0.267	1.5e-93
UNIPROTKB\|Q7Z3U7		1718	MON2 "Protein MON2 homolog" [H	0.223	0.209	0.278	2.7e-83
MGI\|MGI:1914324		1715	Mon2 "MON2 homolog (yeast)" [M	0.338	0.317	0.287	1.7e-82
WB\|WBGene00008685		1646	mon-2 [Caenorhabditis elegans	0.160	0.156	0.25	1.7e-47
UNIPROTKB\|Q19338		1646	mon-2 "Monensin-resistant homo	0.160	0.156	0.25	1.7e-47
UNIPROTKB\|G4N2E3		1761	MGG_07913 "Uncharacterized pro	0.100	0.091	0.298	1.4e-44
ASPGD\|ASPL0000017942		1608	AN3643 [Emericella nidulans (t	0.083	0.083	0.297	4.8e-42

UNIPROTKB\|Q0JIX0 Os01g0772700 "Os01g0772700 protein" [Oryza sativa Japonica Group (taxid:39947)]	Back alignment and assigned GO terms

 Score = 1696 (602.1 bits), Expect = 0., Sum P(6) = 0.
 Identities = 355/627 (56%), Positives = 452/627 (72%)

Query:   801 ILELLRSVADASEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQKTELNIS 860
             I +  ++V DASEKDLI+LGFQS+R IMN+GL++IP  C+ EC+ VTGAY +QKT++NIS
Sbjct:   522 IFKRKKAVTDASEKDLISLGFQSIRVIMNEGLATIPVQCLDECILVTGAYGTQKTDINIS 581

Query:   861 LTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDD--QNH 918
             LTAVGLLWT TDF+ KGL   IS+  E AN        +  G  +EE   S+  D  Q+ 
Sbjct:   582 LTAVGLLWTATDFVVKGL---ISKSAEKANG--MDEEAESGGTVKEEALSSSEKDIKQSP 636

Query:   919 SIGMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNY 978
                +VD +KL F+VFS+L+KLGAD+RPEVRNSA+RTLFQTL +HGQKLS++MWEDCLW Y
Sbjct:   637 LKSVVDYNKLFFSVFSVLQKLGADDRPEVRNSAVRTLFQTLSTHGQKLSKTMWEDCLWIY 696

Query:   979 VFPMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIA 1038
             VFPML+  SH+A+TSS+DEWQGKELGTR GKAVHMLIHHSRNTAQKQWDET+VLVLGGIA
Sbjct:   697 VFPMLERVSHLASTSSRDEWQGKELGTRAGKAVHMLIHHSRNTAQKQWDETIVLVLGGIA 756

Query:  1039 RLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLP 1098
             RLLRSFFPFL  LS F +GW  LL FVKN ILNGSKEV+LAAINCLQT V S+ +KGNL 
Sbjct:   757 RLLRSFFPFLQQLSKFSSGWVLLLDFVKNGILNGSKEVALAAINCLQTFVGSNCSKGNLE 816

Query:  1099 VAYLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYVQAQKMFDDRMYGQLLAII 1158
              +Y+ SVLD+YE  LQ SPNY +++A KVKQE+L GLG+LYVQAQ +F+D MY +L+A++
Sbjct:   817 SSYVKSVLDIYELVLQTSPNYKNDSADKVKQEVLRGLGDLYVQAQSLFNDEMYLRLMAVM 876

Query:  1159 DLAVRQTMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSD 1218
              L ++ +M   D Y+ E G +P + R ILEI+P+L PT  L SMW  LL E+L YL   D
Sbjct:   877 HLMIKSSMNPTD-YDNELGSIPALQRGILEIIPMLRPTTMLSSMWSPLLLELLCYLNSHD 935

Query:  1219 SPLQKKEDEEEPPSTSDNIHDVHVRTKYDKPNGTAPTTPKDASALSESSGSVTAAIP--- 1275
             +PLQK+  E         +H+     K D  NG A     + S L+ SS  +  A+    
Sbjct:   936 TPLQKQGKE---------MHE----QKSDAANG-ATHGFLERSHLNNSSTKMDNAVGCGW 981

Query:  1276 NHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTRRDNPDSSLWRLAVEGFNH 1335
               +F EKL+P+VV+LFL+AP  E+    PE+I+ LGRCM TRRDNP  +LWR++ E FN 
Sbjct:   982 GIMFIEKLVPIVVNLFLEAPQNERFNSSPEVIRCLGRCMNTRRDNPKGTLWRVSAECFNR 1041

Query:  1336 ILVDDVTKLAANFWQDMKISRPARLRVWKEVADVYEIFLVGYCGRALPSNSLSAVALSGA 1395
             +LVD+VT  +A+    M   + +R R WKEVADVYE FLVG CGR L S+  S  +++ A
Sbjct:  1042 VLVDEVTHDSADCKSGMSSYKFSRARFWKEVADVYETFLVGSCGRVLSSDVPSVDSVT-A 1100

Query:  1396 DESLEMSILDILGDKILKSPIDAPFDV 1422
             DE+LEM++L + GD +LK   DAP ++
Sbjct:  1101 DETLEMAVLTVFGDNVLKLQKDAPVEL 1127

GO:0005086 "ARF guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005802 "trans-Golgi network" evidence=IBA

GO:0016192 "vesicle-mediated transport" evidence=IBA

DICTYBASE\|DDB_G0271398 mon2 "unknown" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|Q29L43 mon2 "Protein MON2 homolog" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]	Back alignment and assigned GO terms

FB\|FBgn0031985 mon2 [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|Q7Z3U7 MON2 "Protein MON2 homolog" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:1914324 Mon2 "MON2 homolog (yeast)" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

WB\|WBGene00008685 mon-2 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|Q19338 mon-2 "Monensin-resistant homolog 2" [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

UNIPROTKB\|G4N2E3 MGG_07913 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000017942 AN3643 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1608
pfam12783		166	pfam12783, Sec7_N, Guanine nucleotide exchange fac	3e-17
PLN03076		1780	PLN03076, PLN03076, ARF guanine nucleotide exchang	1e-13
PLN03076		1780	PLN03076, PLN03076, ARF guanine nucleotide exchang	1e-04

>gnl\|CDD\|221768 pfam12783, Sec7_N, Guanine nucleotide exchange factor in Golgi transport N-terminal	Back alignment and domain information

 Score = 80.3 bits (199), Expect = 3e-17
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 24/171 (14%)

Query: 229 GLRLLEDL-----TALAAGGSASWLHVNTLQRTFVLDILEFILSNHVSLFRMLVSYE--- 280
              +  DL       L       +L      +   L+++E IL NH  +F    S     
Sbjct: 8   AFLVFRDLCKLSMKPLDEEEKPDFLSHEERSKLLSLELIESILENHGDVFL---SSPPEL 64

Query: 281 -QVLRHQICSLLMTSLRTNVENEGETGEPYFRRLVLRSVAHIIRLYSSSLITECEVFLSM 339
             ++R  +C  L+ +L ++         P F R  LR    ++  + S L  E EVFLS+
Sbjct: 65  LDLIRQYLCPSLLRNLSSSSF-------PVFVR-SLRIFLLLLSKFRSHLKLEIEVFLSL 116

Query: 340 LVKVTFLDL---PLWHRILVLEILRGFCVEARTLRLLFQNFDMNPKNTNVV 387
           L+    L+    P W + LVLE+LR  C + + L  ++ N+D +  + N+ 
Sbjct: 117 LILRI-LESDNSPFWQKELVLEVLRRLCRDPQLLVEIYLNYDCDEDSKNIF 166

The full-length Sec7 functions proximally in the secretory pathway as a protein binding scaffold for the coat protein complexes COPII-COPI. The COPII-COPI-protein switch is necessary for maturation of the vesicular-tubular cluster, VTC, intermediate compartments for Golgi compartment biogenesis. This N-terminal domain however does not appear to be binding either of the COP or the ARF. Length = 166

>gnl\|CDD\|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>gnl\|CDD\|215560 PLN03076, PLN03076, ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1608
KOG1848		1610	consensus Uncharacterized conserved protein [Funct	100.0
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	100.0
KOG0929		1514	consensus Guanine nucleotide exchange factor [Intr	100.0
KOG0928		1386	consensus Pattern-formation protein/guanine nucleo	100.0
PF12783		168	Sec7_N: Guanine nucleotide exchange factor in Golg	99.96
COG5307		1024	SEC7 domain proteins [General function prediction	99.59
KOG1848		1610	consensus Uncharacterized conserved protein [Funct	98.69
KOG1846		1777	consensus Uncharacterized conserved protein, conta	98.68
PF09324		86	DUF1981: Domain of unknown function (DUF1981); Int	98.64
PLN03076		1780	ARF guanine nucleotide exchange factor (ARF-GEF);	98.62
KOG0929		1514	consensus Guanine nucleotide exchange factor [Intr	86.13
PTZ00429		746	beta-adaptin; Provisional	84.56
PF01602		526	Adaptin_N: Adaptin N terminal region; InterPro: IP	80.65

>KOG1848 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

Probab=100.00  E-value=1.7e-145  Score=1350.74  Aligned_cols=1469  Identities=30%  Similarity=0.353  Sum_probs=1101.1

Q ss_pred             CchHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHhcCCCCCc----ccC-chhHHHHHHHHhcCCCchHHHHHHHHHH
Q 000374            1 MALMAVLESDLRALSAEARRRYPAVKDGAEHAILKLRSLSSPSE----LAQ-SEDILRIFLMACEVRTVKLSVIGLSCIQ   75 (1608)
Q Consensus         1 m~~~~~L~~dL~~L~~EskRK~~~lk~A~e~al~~Lk~~~~~~~----l~~-~~~~l~Pfllac~sk~~Kl~~iaL~~lq   75 (1608)
                      |+++++|.+||++|++||||||++||+|||+++.+||+..+.++    +.. +++|+.||++||.+||.|++.+||+|||
T Consensus         9 ~sl~~aL~adLrsLsseArkKnn~VK~aAdkSi~~Lr~isS~s~ds~vlet~~edf~~PfllaC~sr~tRl~~ials~iQ   88 (1610)
T KOG1848|consen    9 MSLVRALLADLRSLSSEARKKNNEVKLAADKSIQELRQISSASRDSDVLETPNEDFLVPFLLACISRNTRLFVIALSCIQ   88 (1610)
T ss_pred             HHHHHHHHHHHHHhhHHHHhhchHHHHHHHhHHHHHHhhccccccccccccCCcccccceeeecccCcccceeeHHHHHH
Confidence            78999999999999999999999999999999999999998865    444 8999999999999999999999999999


Q ss_pred             HHHccCCCCcchHHHH-HHHHHhccCCCCchHHHHHHHHHHHHHcCCCCCCchHHHHHHHHHhhhhcccccChHHHHHHH
Q 000374           76 KLISHDAVAPSALKEI-FSMLKNHADMVDESVQLKTLQTILIIFQSRLHPENEDNMAQALGICLRLLENNRSSDSVRNTA  154 (1608)
Q Consensus        76 kLi~~~~i~~~~l~~I-l~~l~~~~~~~~e~vqLKILQ~L~~l~~s~~~~~~g~~L~~~L~~C~~L~~~sks~~~v~~TA  154 (1608)
                      ||+.|++++++...++ -+.||.+...  |.+|||+||++|.++++|...++|+.|.+++.+||+||. +|++ +|.|||
T Consensus        89 kL~~~dsleps~~aeildn~L~a~~qa--e~~QLrvLQtiPii~~syl~fi~~p~l~kll~iCfnLl~-~knk-vV~NaA  164 (1610)
T KOG1848|consen   89 KLGRHDSLEPSVTAEILDNNLWAAAQA--EWIQLRVLQTIPIIFFSYLTFITGPPLLKLLIICFNLLY-QKNK-VVFNAA  164 (1610)
T ss_pred             HHhccCCCCCcccHHHHHHHHHHHHHH--HHHHHhhhccccceeeeceeeccCcHHHHHHHHHHHHHc-CCCc-ceechh
Confidence            9999999999654444 4555544333  568999999999999999999999999999999999976 5778 999999


Q ss_pred             HHHHHHHHHHHHhhhhhhccCCCCCCCCCCCcccccccccccccccCCCCccccccccCCCccchhchhhhHHHHHHHHH
Q 000374          155 AATFRQAVALIFDHVVRAESLPMGKFGSGAHITRTNSVTGDVSRSINHSESLEHEFASEGPSLRRETLTKAGKLGLRLLE  234 (1608)
Q Consensus       155 ~ATL~Qlv~~VFdrv~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~da~~lf~  234 (1608)
                      +||+||+|..|||||..+.+.    ++..-+...+......                   +......+++..+|++..|.
T Consensus       165 aAtlrQlV~~vFdrv~ies~~----~d~~l~sl~~~s~t~s-------------------l~aa~~~~~~l~~dI~~~~~  221 (1610)
T KOG1848|consen  165 AATLRQLVLLVFDRVPIESDA----FDFILPSLTEASGTSS-------------------LEAALTALDPLQKDICVGFE  221 (1610)
T ss_pred             HHHHHHHHHHHHHhccccccc----ccccchhhhccCCccc-------------------hhhcccccchHHHhHhcchH
Confidence            999999999999999864321    1100000000000000                   00013456788899999999


Q ss_pred             HHHhhhcCCCCCcc-cccchhhHhhHHHHHHHHHhCchhhccCHhhH--HHHHHHHHHHHHHhhccccc-----------
Q 000374          235 DLTALAAGGSASWL-HVNTLQRTFVLDILEFILSNHVSLFRMLVSYE--QVLRHQICSLLMTSLRTNVE-----------  300 (1608)
Q Consensus       235 dLc~L~~~~~p~~l-~~~~l~~~~~LELiesvL~n~~~~F~~h~el~--~llr~~lc~lLi~~ls~n~~-----------  300 (1608)
                      ++|.+..+..++|| .+.+.++..|+|++|+++.+....+..|.+|.  ++++..+||++.|++..++.           
T Consensus       222 ~i~l~~~~~~~~~L~~Iee~~~s~~~elLesilks~~s~~dq~qdf~~a~ll~~~~~Py~~Rl~~~sv~~i~~l~~~ea~  301 (1610)
T KOG1848|consen  222 NIQLMYPAIFDQLLAFIEESTKSPGLELLESILKSNASKSDQIQDFAPAELLALNVVPYAERLLLRSVDLIQKLACHEAV  301 (1610)
T ss_pred             HHHHhcccccHhHHhcchhccccchhhhhhhhhhcchhhhHHHHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHhccHHH
Confidence            99999999999998 68899999999999999999999999999999  99999999999997754421           


Q ss_pred             ------------------CCCCCCcccHH--HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccCCCcHHHHHHHHHHH
Q 000374          301 ------------------NEGETGEPYFR--RLVLRSVAHIIRLYSSSLITECEVFLSMLVKVTFLDLPLWHRILVLEIL  360 (1608)
Q Consensus       301 ------------------~~~~~~~~~F~--~~~lRi~~~li~~~~~~L~~E~EvfLs~Li~~l~~~~~~w~r~L~LEvl  360 (1608)
                                        ..+..+...|+  .-..+.+......|-..+-.++++|++.+.++-+.+.+.|+|.+.+|++
T Consensus       302 ~~~ev~lnvi~slisn~~ll~~~~~~s~~~~kdlv~~l~~~v~l~~~~i~v~~~v~la~~lk~~s~~~~~~p~~l~~~~~  381 (1610)
T KOG1848|consen  302 VNEEVLLNVIKSLISNTNLLFDPESLSYPCSKDLVWKLAVSVLLYVLSIGVPVAVFLASLLKFDSMDLELWPRFLDFLFL  381 (1610)
T ss_pred             HHHHHHHHHHHHHHHhcccccchhhccccccHHHHhHHhHHHheeecccCcchhhhHHHHhhhhhcCcccCccHhHHHhh
Confidence                              00000111111  1133444455555677888999999999999999999999999999999


Q ss_pred             HHHhcChHHHHHHHHhcCCCCCCccHHHHHHHHHHHHhhcccc-------cccchhhHHhhhc-cccCcccccccccccC
Q 000374          361 RGFCVEARTLRLLFQNFDMNPKNTNVVEGMVKALARVVSSVQF-------QETSEESLSAVAG-MFSSKAKGIEWILDND  432 (1608)
Q Consensus       361 ~~l~~dp~ll~~iy~~YD~~~~~~nI~~~li~~L~~~~~~~~~-------~~~s~e~l~~~~g-~~~~k~kGi~~~l~~d  432 (1608)
                      ++++.+++.++.+++|+||++.++++++..+..+.+++.-..+       ++...++.+.+.| .|..|.+||+|-.+.|
T Consensus       382 ~siv~k~dsi~~~trn~diktk~thlldk~~~plan~vy~~lv~ti~nsi~e~l~k~s~esg~~eFt~k~k~Ie~~~dnd  461 (1610)
T KOG1848|consen  382 KSIVPKNDSIQIFTRNFDIKTKVTHLLDKEILPLANFVYKELVGTISNSIQEMLNKSSIESGGSEFTSKEKGIELREDND  461 (1610)
T ss_pred             ccCCCCchhhHHHHhhcccCcchHHHHhhcccccchhHHHHHHHhhhHHHHHHHHHhHHhhcCccchhhhcCceeeccCc
Confidence            9999999999999999999999999999999999998874322       1222223333344 7888889999876655


Q ss_pred             cCCCcccCCchhhHHHHHHHHHHHHHHHhhhcccccccCCCCCCCCCCCCCCCccCCC-chhHHHHHHHHhhHHHHHHHH
Q 000374          433 ASNAAVLVASEAHSITLAIEGLLGVVFTVATLTDEAVDVGELESPRCDYDPLPKCMGE-TAVLCISMVDSLWLTILDALS  511 (1608)
Q Consensus       433 ~~~~~~ll~~Ea~~I~~~~e~la~~i~tv~~ltd~~~~~g~~~~p~~~~~~~~~~~~~-~~~~~~~m~~~~W~~iLaalS  511 (1608)
                      +....+++--+.-.+..+.|++..+.++++.+.+.+.+.+.+..+.....+.....++ ...+...++.+.|..++++++
T Consensus       462 s~stavl~~l~~~~~~li~e~~~ss~~avSt~~~~a~~v~~l~~~~~~~s~k~~l~~~~kLe~i~~a~~snq~tildalk  541 (1610)
T KOG1848|consen  462 SMSTAVLLQLSFSNKVLIPEGLYSSRMAVSTLLKRAQDVLHLYIEDEVLSNKCPLPRQTKLEIIFDAVLSNQSTILDALK  541 (1610)
T ss_pred             hHHHHHHHHHHhhhhhhccccchhhhHHHHHHHHHHHHHHHHhhhhhhhccCCccccceeehhHHHHHhhccccHHHHhh
Confidence            4322222211222223333444333344444322222222111111111111111111 234566789999999999999


Q ss_pred             hhHhhcCCHHHHHHHHHHHHHHHHHHcccCCchhHHHHHHHHHHHhccCCCCcccccc-cccCCCCCC------------
Q 000374          512 LILSRSQGEAIILEILKGYQAFTQACGVLHAVEPLNSFLASLCKFTINIPNESDRRSA-VLQSPGSKR------------  578 (1608)
Q Consensus       512 ~~l~~s~De~~~~~~L~gfq~~a~vag~l~L~~~rDafl~sLck~t~~~~~~~~~~~~-~~~spg~~~------------  578 (1608)
                      ..+..+.|+.+.+.++.+++.++..||+.+-+++..+++..||+|....|...+.... +..+|..++            
T Consensus       542 s~l~~st~e~is~qvl~s~stltsa~~~~~Ade~lna~~~~l~~~~~~s~r~vs~lr~l~s~Spv~gr~~~sew~~dfet  621 (1610)
T KOG1848|consen  542 STLPESTDEIISAQVLASYSTLTSACGRCSADEVLNALKEALVPFKDFSPRPVSRLRCLNSESPVVGRKMGSEWKIDFET  621 (1610)
T ss_pred             hhccccccchhhHHHHhchHHHHhccccccchhHHHHHHHhhCCcccCCccHHHHHhhccccCccccccCCcceEEEEee
Confidence            9999999999999999999999999999999999999999999999754422111000 001110000            


Q ss_pred             -------------c-cccccccCCcCCChHHHHHHHHHHHHHHhhcCcccccHHHHHHHHHHhHHhhcC-CCCCcccccc
Q 000374          579 -------------S-ESLVDQKDNIVLTPKNVQALRTLFNIAHRLHNVLGPSWVLVLETLAALDRAIHS-PHATTQEVST  643 (1608)
Q Consensus       579 -------------~-~~~~~~~~~~~l~~Kni~~lraLl~La~~lG~~L~~sW~~IL~tlq~l~~~l~~-p~~~~~~~~~  643 (1608)
                                   . -.++....++.++.||+++.|+++++++.+-..++.+|..++.|...+++.... |..+.+.+.+
T Consensus       622 w~~~t~~~~~~p~~~~~s~ss~~~v~lT~snvqa~rsf~t~~~~~~~sy~~sw~llm~t~~~ls~~~~m~p~qt~l~v~t  701 (1610)
T KOG1848|consen  622 WDKATIILNRSPTSKHLSTSSLNRVNLTNSNVQASRSFSTLMDYELVSYKNSWSLLMYTTSSLSQPAYMEPLQTLLAVIT  701 (1610)
T ss_pred             ccceeeEecCCCCCccccccCCCccccccchHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHhcchhhcCHHHhhHHHHh
Confidence                         0 001112356789999999999999999999999999999999999999998765 6655544433


Q ss_pred             ccccccccc----cCccchhhHHHHhhHHHhhhccCCCHHHHHHHHHHHHHhhHHhhhCCCCCCCCCCCCCCCCe--eeh
Q 000374          644 ASSKLARES----SGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQCMIGTSSSFGPTSSQKIGSI--SFS  717 (1608)
Q Consensus       644 ~~p~~~~~~----~~~~~dl~il~si~~~LFesS~~L~~esl~~~i~ALc~lS~~~l~~~~~~~~~~~~~~~~~~--~F~  717 (1608)
                      ..+.-+.++    ...+.|..+++++.+++|++++.++..++..++.||.+++.+.+........      ...|  .|.
T Consensus       702 ~~~~hp~~p~~~~~~~ynd~~~lssl~~~v~~~~a~~~~ss~~slL~ali~ls~~sli~~~~~~~------sslr~~~~~  775 (1610)
T KOG1848|consen  702 SSSVHPIQPLTAPRQSYNDDLLLSSLKNSVYKTSANRSISSGISLLRALIELSYSSLILETVCSC------SSLRFLDSK  775 (1610)
T ss_pred             cCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhhccc------cccccccch
Confidence            333333322    1345687889999999999999999999999999999999986654332100      0011  133


Q ss_pred             HHHHHHHHHhhcccchhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH--------------------hh--CCccc
Q 000374          718 VERMISILVNNLHRVEPLWDQVVGHFLELADNSNQHLRNIALDALDQSICA--------------------VL--GSEKF  775 (1608)
Q Consensus       718 L~kL~ev~l~N~~R~~~iW~~l~~hli~v~~~~~~~lr~~Avd~L~~l~~~--------------------~L--~~~~~  775 (1608)
                      ++-.+-+...|-.|....|+...+||...+++--.+++..+.-++...+..                    ++  ...++
T Consensus       776 l~v~~~~~~l~e~snq~~~~naa~~l~t~~n~vl~s~~~~~asals~da~~dv~sk~ti~~es~~~~l~sl~v~~~s~~~  855 (1610)
T KOG1848|consen  776 LDVSGWSLILKELSNQFKIINAAPELRTRANNVLASILVDVASALSNDASPDVYSKQTIFFESLGMLLPSLEVSDNSSRG  855 (1610)
T ss_pred             hhhhHHHHHHHHhhhHHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhcccccchhccceeeHhhhHHHHHHHHHHHhcCcc
Confidence            444444444555566666777777777766665555555554444322100                    00  11133


Q ss_pred             hhhhhhccc---chhcccCcccCCChHHHHHHHhhhhhc---cchHHHHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHH
Q 000374          776 QDSASRQRG---TSDERCGEKLHYSWPSILELLRSVADA---SEKDLITLGFQSLRFIMNDGLSSIPTDCIHECVDVTGA  849 (1608)
Q Consensus       776 q~~~l~~l~---~IL~~~g~~l~sgW~~If~IL~~v~~~---~~~~lv~~aF~~LqlI~~Dfl~~Lp~~~~~~~V~~L~~  849 (1608)
                      .+++.+.++   .|||++|+.+-+||..||++|+++++.   +++++|+.||++|++|++|||++||.+|+..|||++..
T Consensus       856 ~evr~~sl~~l~silet~ge~ll~~w~sV~eml~s~~d~~~ekek~ivrlgf~~lrlIssDfLqSLp~sci~~lidtl~~  935 (1610)
T KOG1848|consen  856 VEVRISSLEALVSILETVGEHLLHGWQSVFEMLRSATDFGSEKEKKIVRLGFSCLRLISSDFLQSLPTSCILDLIDTLLV  935 (1610)
T ss_pred             ceeeHHHHHHHHHHHhccchhhccccHHHHHHHHHHhhccchhhhhHHHhhhhhhhhhhhcchhcCChHHHHHHHHHHHH
Confidence            334444444   468999999999999999999998764   58899999999999999999999999999999999999


Q ss_pred             HHhcCCCcchhHHHHHHHHHHHHHHHhccCCCchhhhhhhhcccCCCccccCcchhhhhhcccccccCCCCcchhhhhhH
Q 000374          850 YSSQKTELNISLTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSIGMVDRDKLL  929 (1608)
Q Consensus       850 F~~q~~d~NISLtAi~llw~isD~L~~~~~~~~~~~k~~~~~~~~s~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~lW  929 (1608)
                      |++|++|+||||||||+||+++||+++++.  +..++...++            ..|+..+..      +.+-..++.+|
T Consensus       936 fs~QktdlNISltAi~lfWtvsDfl~~km~--S~sed~~~~~------------~~e~~~ss~------~~~~~l~e~lw  995 (1610)
T KOG1848|consen  936 FSRQKTDLNISLTAIGLFWTVSDFLKNKMF--STSEDSCAYN------------SVEDLYSSM------KSKEILPEVLW  995 (1610)
T ss_pred             HHhhhccccccHHHHHHHHHHHHHHHhhhh--ccchhhhhhc------------chhhhcccc------cchhhhhhHHH
Confidence            999999999999999999999999997421  1111111111            111111111      12234578999


Q ss_pred             HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhHHHHHHHhhhhhccCCcccccccccccCCCc
Q 000374          930 FAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVFPMLDCASHMAATSSKDEWQGKELGTRGGK 1009 (1608)
Q Consensus       930 ~~LL~~L~~L~~D~R~EVRn~AiqTLfril~~~g~~ls~~~W~~~f~~VLFPLL~~l~~~~~~~s~~e~~~~~~~~~~~~ 1009 (1608)
                      +.||..|+++|.|+|+||||||+||||||+.+||+.|++.+|+.|+|+|++|||+......    .+||+++++      
T Consensus       996 i~ll~~L~~~~~dsr~eVRngAvqtlfri~~Shg~~l~~~aW~s~~w~vi~pLLd~~~~q~----~~ewngkei------ 1065 (1610)
T KOG1848|consen  996 IMLLVHLADLCEDSRAEVRNGAVQTLFRIFNSHGSKLGTNAWASCCWLVIMPLLDSQPIQN----VSEWNGKEI------ 1065 (1610)
T ss_pred             HHHHHHHHHHhccchHHHhhhHHHHHHHHHhhhcccCChhHHHHHHHHHHHHHhccccccc----hhhhcchhH------
Confidence            9999999999999999999999999999999999999999999999999999999886321    356666542      


Q ss_pred             cchhhcccccchhhhhHHHHHHHHHHHHHHHHHhhhhhhccccchHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHh
Q 000374         1010 AVHMLIHHSRNTAQKQWDETLVLVLGGIARLLRSFFPFLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVL 1089 (1608)
Q Consensus      1010 ~~~~lihhsr~~~~k~W~ET~vlal~gl~~lf~~~~~~l~~l~~F~~~W~~LL~~~~~~~~~~~~els~aa~~sL~~lL~ 1089 (1608)
                                   +|||.||.+++++|++|+|..||..|..+.+|.+.|+.+|+|+.++....+.+++.++++|||+++.
T Consensus      1066 -------------qkqwtet~~ltisgIaklf~e~fk~llnln~f~~vwe~ll~flkrl~s~~s~e~slsai~~~qell~ 1132 (1610)
T KOG1848|consen 1066 -------------QKQWTETSCLTISGIAKLFSENFKLLLNLNGFLDVWEELLQFLKRLHSDISPEISLSAIKALQELLF 1132 (1610)
T ss_pred             -------------hhhhhhhhhhhHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHhcCChHhHHHHHHHHHHHHH
Confidence                         6999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCCCChh---HHHHHHHHHHHhhcCCCCCCCCCCcchhHHHHHHHHHHHH--HHHhhCCHHHHHHHHHHHHHHHHc
Q 000374         1090 SHSTKGNLPVA---YLNSVLDVYEYALQKSPNYSDNAAGKVKQEILHGLGELYV--QAQKMFDDRMYGQLLAIIDLAVRQ 1164 (1608)
Q Consensus      1090 ~~~~~~~~~~~---~~~~~~~~w~~i~~~~~~~~~~~~~~~~q~~l~~f~~ly~--~~~~~~~~~~~~~~l~il~~~~~~ 1164 (1608)
                      .....++++..   ....++..|+.++..++.+..++..++.||.+++|+..|+  .+++.+..+.++..+..++.++.|
T Consensus      1133 sii~~~~ln~~~~~k~n~vf~~y~~~~~~~ssas~~t~~kv~~eiltgl~~~vqs~sk~d~~~~e~~~~slll~~kai~y 1212 (1610)
T KOG1848|consen 1133 SIIEFGKLNATFTLKINLVFINYGRFCEVSSSASERTLAKVSQEILTGLIESVQSLSKADNFGIEEIKDSLLLVRKAIFY 1212 (1610)
T ss_pred             HHhhhccccchHHHHhhhhhhhHhhhcccccccchhHHHHHHHHHHhhhHHHHHHHHhhcchhHHHHHHHHHHhhhcccc
Confidence            99999888776   5566777888777777666666678999999999998888  455677789999999999999999


Q ss_pred             cCCCCCCCccccCCCCHHHHHHHHhccccCCCccchhhHHHHHHHHHcccCCCCCCC--CCCCCCCCCCCCCCccccccc
Q 000374         1165 TMITHDNYEIEFGHVPPVLRTILEILPLLSPTEQLCSMWLVLLREILQYLPRSDSPL--QKKEDEEEPPSTSDNIHDVHV 1242 (1608)
Q Consensus      1165 ~~~~~~~~~~d~~~~s~lQ~~vl~~l~~i~~~~~~~~~~~~~~~~l~~f~~~~~~~~--~~~~~~~~~~~t~~~~~~~~~ 1242 (1608)
                      |.++.  +..|..+ ||+|.+|++.++.+-++. ...+|..++.....+.+.+|.-.  ++.. +++.            
T Consensus      1213 p~~~~--ft~d~hv-psvq~avls~ld~l~~~~-~~~~~lvLl~~sthltpafdt~l~~~k~~-~~g~------------ 1275 (1610)
T KOG1848|consen 1213 PESTS--FTLDVHV-PSVQLAVLSLLDLLISDK-FKLNHLVLLLWSTHLTPAFDTRLKITKKL-GPGL------------ 1275 (1610)
T ss_pred             CCCch--hhhhccC-ChHHHHHHhhcchhccCc-cccchhHHHHHhhhhhhhhhhhhhhhhcc-CCCC------------
Confidence            98776  8888776 889999999999998843 45666677777666666665322  1110 0000            


Q ss_pred             ccccCCCCCCCCCCcchhhhhhhccCCcccccchHHHHHhHhHHHHHHhhhcchhhhcchhHHHHHhhccccccc-CCCC
Q 000374         1243 RTKYDKPNGTAPTTPKDASALSESSGSVTAAIPNHLFAEKLIPVVVDLFLKAPAVEKCIIFPEIIQNLGRCMTTR-RDNP 1321 (1608)
Q Consensus      1243 ~~~~~~~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~i~~~l~~~~~~k-~~~~ 1321 (1608)
                      +..-.++-|...+    +         ..-...+.-++++.++-....+++++.+.++--+++...-+.+++-+. +++|
T Consensus      1276 ~~~e~~~das~et----l---------~~~s~~t~rna~nkv~~~g~~~l~a~a~~~i~~f~ev~~rlkr~~~t~~r~np 1342 (1610)
T KOG1848|consen 1276 PKEEKTIDASLET----L---------ICLSKKTFRNAENKVENHGLDFLNAGAMQHIFEFLEVPMRLKRRCPTASRVNP 1342 (1610)
T ss_pred             chhhhcccchhhh----h---------HHhhHHHhhhchhhhchhhHHHHhhhHHHHHHhhHHHHHHHHHHcccccccCC
Confidence            0000000000000    0         000112333888888877777888888877766666666666554444 8889


Q ss_pred             CCcchHHHHHHHHHHHHHhhHhHhhh-----hcccccCChHHHHHhHHHHHHHhhhhhcccCC-C--CCCCCCCChhhcc
Q 000374         1322 DSSLWRLAVEGFNHILVDDVTKLAAN-----FWQDMKISRPARLRVWKEVADVYEIFLVGYCG-R--ALPSNSLSAVALS 1393 (1608)
Q Consensus      1322 ~~~~Wk~a~~~~~~il~~~l~~~~~~-----~~~~~~~~~~~~~~~W~~v~~~~~~~l~~~~~-~--~~~~~~~~~~~~~ 1393 (1608)
                      +.|+|++|..+|++..-.+.......     ....+.+...+...+|++..|++++++.++|+ +  +..+..++.....
T Consensus      1343 e~piwvlas~cF~~l~~~~fk~l~~~~~~~laet~l~lflt~~it~~rinpevd~~~~~~~cd~e~~~~ksl~l~a~~~l 1422 (1610)
T KOG1848|consen 1343 ELPIWVLASKCFVRLMINCFKDLKGSDAIELAETMLCLFLTVEITNSRINPEVDYEYVWSLCDFENSSLKSLHLLAKPHL 1422 (1610)
T ss_pred             CCceeeeeHhhHHhhHHHHHHHhccccccchhhhhhheeeEEEeeeeeeCcchhhhhhhhhcccccchhhhhhhccchhh
Confidence            99999999999999887775543322     00001122345567899999999999999988 3  2344556667888


Q ss_pred             ccchhhchHHHHHhhhhccCCCCCCChhhhhhhHHHhhhcccCCCCCCccccccCccchhh--hHHHHHHHHhhhhcCCC
Q 000374         1394 GADESLEMSILDILGDKILKSPIDAPFDVLQRLISTIDRCASRTCSLPVETVELMPAHCSK--FSLACLHKLFSLSSSDN 1471 (1608)
Q Consensus      1394 ~~dE~~d~~~~~~l~~~i~~~~~~~p~~~~~~l~~l~~~~~~r~~~~~~~t~~~~~~~r~r--~s~~c~d~Lf~l~s~~~ 1471 (1608)
                       .+|.+++++++.+++.++.+..|.|.+.++|+++++++++.| ++.++.+.+..|+|..|  .+|.||+.||+..... 
T Consensus      1423 -~ne~led~~i~~~~d~~l~~~~d~prn~l~rlistl~r~sqk-~ss~~fs~~~~~~hn~Rf~la~~Cf~~ll~ds~s~- 1499 (1610)
T KOG1848|consen 1423 -QNECLEDEVIQYYIDLCLGSFYDQPRNTLDRLISTLNRDSQK-ASSNFFSSTESPVHNRRFRLAVDCFSILLDDSNSS- 1499 (1610)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHh-hhccCccccccCccChhHHHHHHHHHHHHHhcchh-
Confidence             999999999999999999999999999999999999999988 77777777777777666  5666999999877531 


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCChhHHHHHHHHHHHHHhcccCcccccCCCCCcccccc
Q 000374         1472 EASKWNLTRAEVSKISITVLMGRCEYILNRFLIDENDLGERNFPAARLEEIIFILQELARLKIHPDTASALPLHPVLKSG 1551 (1608)
Q Consensus      1472 ~~~~~~~~~~~~a~~~~p~Ll~Rc~~~L~~yi~D~~l~G~~P~Pr~r~~El~~vL~~l~~L~~~~~~~~~~~~~~~~~~~ 1551 (1608)
                          .+..|..+++++.|+|..||..+|++|++||...|..|+|+.|..||+++|++|..|....      +.+|.+   
T Consensus      1500 ----~~ntr~~vsk~~~p~L~aRc~~~Lsry~~Des~~G~lplpksr~~Eiit~lq~l~~l~~~L------~~np~l--- 1566 (1610)
T KOG1848|consen 1500 ----YENTREKVSKTIRPILQARCCWSLSRYVADESVSGYLPLPKSREMEIITVLQCLNNLPSLL------YSNPIL--- 1566 (1610)
T ss_pred             ----hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCchHHHHHHHHHHHHHHHHhhcc------ccCchh---
Confidence                2348999999999999999999999999999999999999999999999999999998883      122221   


Q ss_pred             cccCcCCCcccchhhhhhhhhhheecchhHHHHHHHHH--HHHHhh
Q 000374         1552 LAMDENSDKRPHLLVLFPSFCELVISREARVRELVQVL--LRLITK 1595 (1608)
Q Consensus      1552 ~~~~~~~~~~~hL~~lyp~l~~~~~~~~~~v~~ll~~~--l~~vg~ 1595 (1608)
                         . +..++.||..|+|.+|+.++++.+++....|.+  .+.+..
T Consensus      1567 ---~-n~~~~~hl~~lsPs~~~~~p~~h~~~~l~~qvL~~i~~~~t 1608 (1610)
T KOG1848|consen 1567 ---Y-NLRKAYHLTNLSPSATSLNPAIHGQLTLKNQVLNAILGFTT 1608 (1610)
T ss_pred             ---h-hHHHHHHHHhccHHHHhhhhhhhcccHHHHHHHHHHHhhhc
Confidence               1 267899999999999999987777766555543  444443

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG0928 consensus Pattern-formation protein/guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF12783 Sec7_N: Guanine nucleotide exchange factor in Golgi transport N-terminal	Back alignment and domain information

>COG5307 SEC7 domain proteins [General function prediction only]	Back alignment and domain information

>KOG1848 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>KOG1846 consensus Uncharacterized conserved protein, contains Sec7 domain [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF09324 DUF1981: Domain of unknown function (DUF1981); InterPro: IPR015403 This domain is functionally uncharacterised and found in various plant and yeast protein transport proteins	Back alignment and domain information

>PLN03076 ARF guanine nucleotide exchange factor (ARF-GEF); Provisional	Back alignment and domain information

>KOG0929 consensus Guanine nucleotide exchange factor [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PTZ00429 beta-adaptin; Provisional	Back alignment and domain information

>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1608
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 73.3 bits (179), Expect = 5e-13
 Identities = 103/739 (13%), Positives = 202/739 (27%), Gaps = 286/739 (38%)

Query: 539  VLHAVEPLNSFLASL-CKFTINIPNESDRRSAVLQSPGSKRSESLVDQKDNIVLTPKNVQ 597
            +L   E   +F+ +  CK         D   ++L            ++ D+I+++   V 
Sbjct: 21   ILSVFED--AFVDNFDCKDV------QDMPKSILSK----------EEIDHIIMSKDAVS 62

Query: 598  ALRTLF--------NIAHR-LHNVLGPSWVLVLETLAALDRAIHSPHATTQEVSTASSKL 648
                LF         +  + +  VL  ++  ++  +    R    P   T+       +L
Sbjct: 63   GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQ---PSMMTRMYIEQRDRL 119

Query: 649  ARESSGQYSDFNVLSSLNSQLFESSALMHISAVKSLLSALHQLSHQC------MIGTSSS 702
              ++   ++ +NV                +     L  AL +L          ++G    
Sbjct: 120  YNDNQ-VFAKYNVSR--------------LQPYLKLRQALLELRPAKNVLIDGVLG---- 160

Query: 703  FGPTS-------SQKIGS--------ISF----SVERMISILVNNLHRVEPLWDQVVGHF 743
             G T        S K+          ++     S E ++ +L   L++++P W     H 
Sbjct: 161  SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220

Query: 744  LELADNSN-------------QH------LRNI----ALDALDQSICAVLGSEKFQDSAS 780
              +    +              +      L N+    A +A + S C +L         +
Sbjct: 221  SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLS-CKIL-------LTT 272

Query: 781  RQRGTSDERCGEKL------HYSWP----SILELLRSVADASEKDL-----------ITL 819
            R +  +D             H+S       +  LL    D   +DL           +++
Sbjct: 273  RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSI 332

Query: 820  -G---------FQSLRFIMNDGLSSIPTDCIHECVDVTGAYSSQK--TEL-------NIS 860
                       + + + +  D L++I    I   ++V      +K    L       +I 
Sbjct: 333  IAESIRDGLATWDNWKHVNCDKLTTI----IESSLNVLEPAEYRKMFDRLSVFPPSAHIP 388

Query: 861  LTAVGLLWTTTDFIAKGLVHGISEEKEAANQDLCSVPKQMDGEKREEKTLSNLDDQNHSI 920
               + L+W             I  +       L               +L     +  +I
Sbjct: 389  TILLSLIWF----------DVIKSDVMVVVNKLHK------------YSLVEKQPKESTI 426

Query: 921  GMVDRDKLLFAVFSLLKKLGADERPEVRNSAIRTLFQTLGSHGQKLSESMWEDCLWNYVF 980
             +            L  KL  +    +  S +             L    + D    Y +
Sbjct: 427  SIPSIY------LELKVKL--ENEYALHRSIVDHYNIPKTFDSDDLIPP-YLD---QYFY 474

Query: 981  PMLDCASHMAATSSKDEWQGKELGTRGGKAVHMLIHHSRNTAQKQWDETLVLVLGGIARL 1040
                  SH+                          HH +N    +               
Sbjct: 475  ------SHIG-------------------------HHLKNIEHPE--------------- 488

Query: 1041 LRSFFP--FLANLSNFWTGWESLLHFVKNSILNGSKEVSLAAINCLQTTVLSHSTKGNLP 1098
              + F   FL    +F         F++  I +                    ST  N  
Sbjct: 489  RMTLFRMVFL----DF--------RFLEQKIRHD-------------------STAWNAS 517

Query: 1099 VAYLNSVLDV--YE-YALQKSPNYSDNAAGKVK--QEILHGLGE-LY-------VQAQKM 1145
             + LN++  +  Y+ Y     P Y       V    + L  + E L        ++   M
Sbjct: 518  GSILNTLQQLKFYKPYICDNDPKYE----RLVNAILDFLPKIEENLICSKYTDLLRIALM 573

Query: 1146 FDDRMYGQLLAIIDLAVRQ 1164
             +D       AI + A +Q
Sbjct: 574  AEDE------AIFEEAHKQ 586

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1608
d1u6gc_		1207	Cullin-associated NEDD8-dissociated protein 1 (Tip	86.44
d1b3ua_		588	Constant regulatory domain of protein phosphatase	80.57

>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: HEAT repeat
domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.44  E-value=0.57  Score=19.79  Aligned_cols=83  Identities=14%  Similarity=0.213  Sum_probs=48.1

Q ss_pred             HHHHHHHCCHHHHHHHHHHHH-HHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf             999992049348999999999-9856899984248026899999984489911799999999999805888951199999
Q 000374           14 LSAEARRRYPAVKDGAEHAIL-KLRSLSSPSELAQSEDILRIFLMACEVRTVKLSVIGLSCIQKLISHDAVAPSALKEIF   92 (1608)
Q Consensus        14 L~~EskRK~~~ik~A~e~al~-~Lk~~~~~~~l~~~~~~l~PFllac~skn~Klt~iaL~~lqkLi~~~~i~~~~l~~Il   92 (1608)
                      |..-.+-..||+|-.|-..+. .|+......+.....+++.-++.+.+.+|+.+-..|+.|+..|+.+  ++...+..++
T Consensus         8 ll~k~~~~D~d~R~ma~~dl~~~l~~~~~~~~~~~~~~i~~~ll~~L~D~~~~Vq~~A~k~l~~l~~~--~~~~~~~~l~   85 (1207)
T d1u6gc_           8 LLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSK--VKEYQVETIV   85 (1207)
T ss_dssp             HHHHTTCSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTT--SCHHHHHHHH
T ss_pred             HHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH--CCHHHHHHHH
T ss_conf             99866798872999999999998723014457688999999999996799879999999999999976--7686699999


Q ss_pred             HHHHHC
Q ss_conf             999802
Q 000374           93 SMLKNH   98 (1608)
Q Consensus        93 ~~L~~~   98 (1608)
                      +.|+..
T Consensus        86 ~~L~~~   91 (1207)
T d1u6gc_          86 DTLCTN   91 (1207)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999998

PyMOL of d1u6gc_

>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure