Citrus Sinensis ID: 000388

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------159

MSRKNRMRAESGTCNVCFAPCSSCMHLNLALMGSKTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQGSDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSRDSSFKSLDKGKVRPVTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQKATRDQASLDVKEGPSRVMGKSMSFKSTSSGRSSAGESKLRALSPRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQKPNLVSPKEEPSSSSSEKPSTIVNELVQDGLPRSVESTNQGEKSSSCRSRPTLTAGSKGVLCQKCKEVGHDVESCPLGSTQVSGIDVSAGRNCREGMIKGNKLKAAIEAAMHKLPGTYGRNKVNDQLDGLGITNMDLNCERSSQDQFSVSNKMKGAQEVLINKQTTINQLKPALLKISAVPEHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWPTMFHESGAKEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLPENCQRWNLLFFLWGVFRVRKVNCSNSTKHSCFAGSKMVPLDRVITTDNLSLSQNILPKHADKDSAACDTSHNIVPGSYGPDGTCVTLNENCDNKASSVQLTSLGSQSNSIQHDGRFDSRLLSRAAMTVPLLSGEIRCARPPLEECNLAEGGLGTEVKSSLQATRTSISCSKGGTSEMNGDASLGEDSSSLKNFPVGNEGAHDEGSVDSGKVPGIMKCGRGQINLEEDLNEGSFDVEKVPDIMESGRDQINLERDLNKGTFDADKIPVITKSGRDQINLERDLNESIVDGKIVPDKIKSGRDQINLERDLNEGSVDAKNVMMDIVKRVRARFNLVRDLNDRGVTAEKLPDIVKSDRDQIDLERDLKEGRYMNAETSLDRNLNFKGLNHQQFHHGNSPHLDLMETAAASSCGTSQKMPWNEAFLDGESSSKKLKTGFAGPYECSSSRDGDSCSDGFSSRRDDLCPSSSNQEKISEELLDRKVILKDLESPERYFFHVDSHRENDCRLGANSMPWKELSSKDEDELLDTVPNLNLALGADTKQPNKGMLPFFVGPLEKNNNQDRPPDKGADKGAEEDISASLSLSLSFPFPDKEQTSVKPASKTEQLLPERRHVNTSLLLFGGFLDK

cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEcccccccccccccEEEccccccHHHHHHHHccccccccEEccccccccccccccccccccEEEEEEcccccccHHHHHHHHHHHHHcccEEEEEcccEEEEEEccccccHHHHccccccEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHccccccccccEEEcccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccEEEEcccccc

ccccEEEEEEccccccccccccccccccHHHccccccccccccccccEcccccccccccccccccccccHccccccccccccccccccccccccccccEEEcccccccccHHcccccccccccccccccccccccccccccccHccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccHcccccccccHcccccccccccccccccccHcccccccccccEEEcccccccccccccccccccHccccccccccccccccccccccHHcccHHccccccccccEEEEEEEEEEccccccHHHEEEEcccccccEEEEEcccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccEEcccccccccEEEEEEEEccccccccHcccHEEcccccccHHHHHHHHHcccEEEEEEcccHHccHHHHHHcccccccEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEEccEEEEEEEcccccHHccEEccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccEHcccccccccccccccEEEcccccccccccEEEccccccccccccccEEEEccccccccccEccHHHHccHcccccccEEEEEcccccccccccccccccccccccccccccccccEccccccccccccccccccccccccEEEccccccccccccccEEEEEEEHccccccHHHHHHHHHHHHHHHEEEEEccccccccHHHHHHHccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccHHcEccccccccccccccccccccccccHcccccHcccccccHEHccccccccccccccEEEccccccccccccccHcccccccccccEEEEEEEcccccccHccccccccccHHHccccccccccEEEEcccccc

msrknrmraesgtcnvcfapcsscmhlnlalmgskteefsdetcrettgsqysineaddlrsfkrgpcnklqqtaseasnplsvnsshdsfsvnaeskvtlrsseisdasedfeihpkfssrggtaegqispkleigldqrislnkyddpkgaeglddniscvsrandtstalsennrnmdiknlshssasvcslgpeglekaqsseklelseipsvekvgascgspkvrspvpdsqsdkrlvESSSDVLTKVHqkseaetdrdngeppdealkcldkdkeeltstqlaelpdvqrfpaasgdetdesdimeqdvKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLqkvpegdwlceeCKFAEETekqkqgsdiegkrtnkqststqssgkrhaenldaapaakrqaietspgypkplspskaaalsrdssfksldkgkvrpvtfgnnssndvvetarspggllpqttkgtllksssfstlnskAKVKLVDEVvpqkqkatrdqasldvkegpsrvmgksmsfkstssgrssagesklralsprpsrlhdlkglKQVKERNAFERKSLsrldrsltvssmatpastpkadqkltprgeavsfssasnnrEAKVvksegkgstltksnstlprkglevsgtpvgalstsamcsssveqkpnlvspkeepsssssekpsTIVNELVqdglprsvestnqgekssscrsrptltagskgvlcqkckevghdvescplgstqvsgidvsagrncregmiKGNKLKAAIEAAMHklpgtygrnkvndqldglgitnmdlncerssqdqfsvsNKMKGAQEVLINKQTTINQLKPAllkisavpeheyiwqggfevhrgeklpnlcDGIQAHLSSCASSKVLEVVSkfpqrirlkevprvstwptmfhesgakeENIALYFFAKDFESYGRNYKILVDSMMKNDLAlmgnldgiellifpsnqlpencqRWNLLFFLWGVFRVrkvncsnstkhscfagskmvpldrvittdnlslsqnilpkhadkdsaacdtshnivpgsygpdgtcvtlnencdnkassvqltslgsqsnsiqhdgrfdSRLLSRAAMTvpllsgeircarppleecnlaegglgtevKSSLQATRtsiscskggtsemngdaslgedssslknfpvgnegahdegsvdsgkvpgimkcgrgqinleedlnegsfdvekvpdimESGRDQINlerdlnkgtfdadkipvitksgrdqinlerdlnesivdgkivpdkiksgrdqinlerdlnegsvdakNVMMDIVKRVRARFNLVRdlndrgvtaeklpdivksdrdQIDLERDlkegrymnaetsldrnlnfkglnhqqfhhgnsphldlmetaaasscgtsqkmpwneafldgessskklktgfagpyecsssrdgdscsdgfssrrddlcpsssnqeKISEELLDRKVILkdlesperyfFHVDshrendcrlgansmpwkelsskdedelldtvpnlnlalgadtkqpnkgmlpffvgpleknnnqdrppdkgadkgaeeDISASlslslsfpfpdkeqtsvkpaskteqllperrhvntSLLLFGGFLDK

msrknrmraesgtcnvcfaPCSSCMHLNLALMGSKTEEFSDETCRettgsqysineaddlrsFKRGPCNKLQQTaseasnplsvnsshDSFSVNAESKVTLRSSeisdasedfeihpkfssrggtaegqisPKLEIGLDQRISLNKYDDPKGaeglddniscvSRANDtstalsennrnmDIKNLSHSSASVCSLGPEGLEKAQSSeklelseipsvekvgascgspkvrspvpdsqsdkrlvesssdvltkvhqkseaetdrdngeppDEALKCLDKDKEELTstqlaelpdvqrfpaasgdetdesdimeqDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEetekqkqgsdiegkrtnkqststqssgkrhaeNLDAAPAAKRQAIEtspgypkplspskAAALsrdssfksldkgkvrpvtfgnnssndvvetarspggllpqttkgtllksssfstlnskakvklvdevvpqkqkatrdqasldvkegpsrvmgksmsfkstssgrssagesklralsprpsrlhdlkglkqvkernaferkslsrldrsltvssmatpastpkadqkltprgeavsfssasnnreakvvksegkgstltksnstlprkglevsGTPVGALSTSAMCSSSVEQKpnlvspkeepsssssekpstIVNELVqdglprsvestnqgekssscrsrptltagskGVLCQKCKEVGHDvescplgstqvsgidvsagrnCREGMIKGNKLKAAIEAAMHklpgtygrnkVNDQLDGLGITNMDLNCERSSQDQFSVSNKMKGAQEVLINKQTTINQLKPALLKISAVPEHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVskfpqrirlkevprvstwptmfhesgakeENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLPENCQRWNLLFFLWGVFRVRKVNCSnstkhscfagskmvplDRVITTDNLSLSQNILPKHADKDSAACDTSHNIVPGSYGPDGTCVTLNENCDNKASSVQLTslgsqsnsiqhDGRFDSRLLSRAAMTVPLLSGEIRCARPPLEECNLAEGGLGTEVKSSLQATRtsiscskggtseMNGDASLGEDSSSLKNFPVGnegahdegsvdsgkvpgIMKCGRGQINleedlnegsfdveKVPDIMESGRDQInlerdlnkgtfdadkipvitksgrdqinlerdlnesivdgkivpdkiksgrdqinlerdlnegsvdaknvMMDIVKRVRARfnlvrdlndrgvtaeklpdivksdrdqidlerdlkegrymnAETSLDRNLNFKGLNHQQFHHGNSPHLDLMETAAASSCGTSQKMPWNEAFLDGESSSKKLKTGFagpyecsssrdgdscsDGFSsrrddlcpsssnqekiseellDRKVILKDLESPERYFFHVDSHRENDCRLGANSMPWKELSSKDEDELLDTVPNLNLalgadtkqpnKGMLPFFVGPLEKNNNQDRPPDKGADKGAEEDISASLSlslsfpfpdkeqtsvkpaskteqllperrhvntslllfggfldk

MSRKNRMRAESGTCNVCFAPCSSCMHLNLALMGSKTEEFSDETCRETTGSQYSINEADDLRSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLGPEGLEKAQSSEKLELSEIPSVEKVGASCGSPKVRSPVPDSQSDKRLVESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQRFPAASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETEKQKQGSDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKRQAIETSPGYPKPLSPSKAAALSRDSSFKSLDKGKVRPVTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQKATRDQASLDVKEGPSRVMgksmsfkstssgrssageskLRALSPRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVSSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKSEGKGSTLTKSNSTLPRKGLEVSGTPVGALSTSAMCSSSVEQKPNLVspkeepsssssekpsTIVNELVQDGLPRSVESTNQGEKSSSCRSRPTLTAGSKGVLCQKCKEVGHDVESCPLGSTQVSGIDVSAGRNCREGMIKGNKLKAAIEAAMHKLPGTYGRNKVNDQLDGLGITNMDLNCERSSQDQFSVSNKMKGAQEVLINKQTTINQLKPALLKISAVPEHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWPTMFHESGAKEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLPENCQRWNLLFFLWGVFRVRKVNCSNSTKHSCFAGSKMVPLDRVITTDNLSLSQNILPKHADKDSAACDTSHNIVPGSYGPDGTCVTLNENCDNKASSVQLTSLGSQSNSIQHDGRFDSRLLSRAAMTVPLLSGEIRCARPPLEECNLAEGGLGTEVKSSLQATRTSISCSKGGTSEMNGDASLGEDSSSLKNFPVGNEGAHDEGSVDSGKVPGIMKCGRGQINLEEDLNEGSFDVEKVPDIMESGRDQINLERDLNKGTFDADKIPVITKSGRDQINLERDLNESIVDGKIVPDKIKSGRDQINLERDLNEGSVDAKNVMMDIVKRVRARFNLVRDLNDRGVTAEKLPDIVKSDRDQIDLERDLKEGRYMNAETSLDRNLNFKGLNHQQFHHGNSPHLDLMETAAASSCGTSQKMPWNEAFLDGESSSKKLKTGFAGPYEcsssrdgdscsdgfssrrddLCPSSSNQEKISEELLDRKVILKDLESPERYFFHVDSHRENDCRLGANSMPWKELSSKDEDELLDTVPNLNLALGADTKQPNKGMLPFFVGPLEKNNNQDRPPDKGADKGAEEDIsaslslslsFPFPDKEQTSVKPASKTEQLLPERRHVNTSLLLFGGFLDK

************TCNVCFAPCSSCMHLNLALMG****************************************************************************************************************************************************************************************************************************************************************************************DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKF******************************************************************************************************************************************************************************************************************************************************************************************************************************************************************GVLCQKCKEVGHDVESCPLGSTQVSGIDVSAGRNCREGMIKGNKLKAAIEAAMHKLPGTYGRNKVNDQLDGLGITNMDL********************EVLINKQTTINQLKPALLKISAVPEHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWPTMFHESGAKEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLPENCQRWNLLFFLWGVFRVRKVNCSNSTKHSCFAGSKMVPLDRVITTDNLSLSQNIL**************HNIVPGSYGPDGTCVTLN********************************LSRAAMTVPLLSGEIRCARPPLEECNL****************************************************************************************************************FDADKIPVIT***************SIVDGKIV*********************VDAKNVMMDIVKRVRARFNLVRDLNDRGVTAEKL**********************************************************************************************************************************RKVILKDLESPERYFFHVDSH*********************************L***************FF***************************************************************TSLLLFGGF***

******M***SGTCNVCFAPCSSCMHLNL****************************************************************************************************************************************************************************************************************************************************************************************IMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC*****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************KISAVPEHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWPTMFHESGAKEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLPENCQRWNLLFFLWGVFRVR*********************************************************************************************************************************************************************************************************************************************KGTF********************************************************************************************SDRDQIDLERDLKEGRY***********************GNSPHLD********************************************************************************VILKDLESPERYFFHVDSHRENDCRL*******************DTVPNLNLA**********GMLPFFV****************************LSLSLSFP************************VNTSLLLFGGFL**

***********GTCNVCFAPCSSCMHLNLALMGSKT************GSQYSINEADDLRSFKRGPCN**********************************SEISDASEDFEIHPKFSSRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNMDIKNLSHSSASVCSLG**************LSEIPSVE**************************************************PDEALKCLDKDKEELTSTQLAELPDVQRFPA**********IMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAE******************************************QAIETS********************FKSLDKGKVRPVTFGNNSSNDVVETARSPGGLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVV***********************************************SPRPSRLHDLKGLKQVKERNAFERKSLSRLDRSLTVS*************************************************STLPRKGLEVSGTPVGALST*******************************IVNELVQDGLPRS***********************KGVLCQKCKEVGHDVESCPLGSTQVSGIDVSAGRNCREGMIKGNKLKAAIEAAMHKLPGTYGRNKVNDQLDGLGITNMDLNCERSSQDQFSVSNKMKGAQEVLINKQTTINQLKPALLKISAVPEHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWPTMFHESGAKEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLPENCQRWNLLFFLWGVFRVRKVNCSNSTKHSCFAGSKMVPLDRVITTDNLSLSQNILPKHADKDSAACDTSHNIVPGSYGPDGTCVTLNENCDNKASSVQLTSLGSQSNSIQHDGRFDSRLLSRAAMTVPLLSGEIRCARPPLEECNLAEGGLGTEVKSSLQATRTSISCSKGGTSEMNGDASLGEDSSSLKNFPVGNE********DSGKVPGIMKCGRGQINLEEDLNEGSFDVEKVPDIMESGRDQINLERDLNKGTFDADKIPVITKSGRDQINLERDLNESIVDGKIVPDKIKSGRDQINLERDLNEGSVDAKNVMMDIVKRVRARFNLVRDLNDRGVTAEKLPDIVKSDRDQIDLERDLKEGRYMNAETSLDRNLNFKGLNHQQFHHGNSPHLDLMETAAASSCGTSQKMPWNEAFLDGESSSKKLKTG***********************************KISEELLDRKVILKDLESPERYFFHVDSHRENDCRLGANSMPWKELSSKDEDELLDTVPNLNLALGADTKQPNKGMLPFFVGPLEKNNNQ****************SASLSLSLSFPFPD*************QLLPERRHVNTSLLLFGGFLDK

***KNRMRAESGTCNVCFAPCSSCMHLNLALMG**********************************************************************************************************Q*IS*N****PKGAEGLDDNISCVSR**********************************************************************************************************************************************SDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEE*****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************QEVLINKQTTINQLKPALLKISAVPEHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWPTMFHESGAKEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLPENCQRWNLLFFLWGVFRVRK*************************************************************************************************************************LE****AEGGLGTEVKSSLQAT**********TSE**GDASLGEDSSSLKNFPVGNEGAHDEGSVDSGKVPGIMKCGRGQINLEEDLNEGSFDVEKVPDIMESGRDQINLERDLNKGTFDADKIPVITK**RDQINLERDLNESIVDGKIVPDKIKSGRDQINLERDLNEGSVDAKNVMMDIVKRVRARFNLVRDLNDRGVTAEKLPDIVKSDRDQIDLERDLKEGRYMNAETSLDRNLNFKGLNHQQFHHGNSPHLDLMETAAASSCGTSQKMPWNEAFLDGESSSKKLKTGFAGPYECS*********************SSSNQEKISEELLDRKVILKDLESPERYFFHVDSHRENDCRLGANSMPWKELSSKDEDELLDTVPNLNLALGADTKQPNKGMLPFFVGPLE*****DRPPDKGADKGAEEDISASLSLSLSFPFPDK*QTSVKPAS*TEQLLPERRHVNTSLLLFGGFL**

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1587	2.2.26 [Sep-21-2011]
Q9DE13		2130	Bromodomain adjacent to z	yes	no	0.042	0.031	0.394	1e-06
A6H619		1682	PHD and RING finger domai	yes	no	0.032	0.030	0.423	2e-06
Q9P1Y6		1649	PHD and RING finger domai	yes	no	0.032	0.030	0.423	2e-06
Q9UIF8		2168	Bromodomain adjacent to z	no	no	0.041	0.030	0.385	2e-06
Q9NRL2		1556	Bromodomain adjacent to z	no	no	0.028	0.029	0.446	3e-06
Q5F3R2		1522	Lysine-specific demethyla	no	no	0.117	0.122	0.273	3e-06
Q80Y84		1544	Lysine-specific demethyla	no	no	0.040	0.041	0.393	5e-06
Q9UGL1		1544	Lysine-specific demethyla	no	no	0.040	0.041	0.393	5e-06
Q3UXZ9		1690	Lysine-specific demethyla	no	no	0.040	0.037	0.409	6e-06
P29375		1690	Lysine-specific demethyla	no	no	0.040	0.037	0.409	7e-06

>sp\|Q9DE13\|BAZ2B_CHICK Bromodomain adjacent to zinc finger domain protein 2B OS=Gallus gallus GN=BAZ2B PE=2 SV=1	Back alignment and function desciption

 Score = 57.4 bits (137), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 318  CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEEC--KFAEETEKQKQG 375
            C IC     E+LL +C  C  G  HTYC +  +  +P+GDW C  C  K + +T K K+ 
Sbjct: 1898 CQICRKGDNEELLLLCDGCDKGC-HTYCHRPKITTIPDGDWFCPACIAKASGQTLKLKK- 1955

Query: 376  SDIEGKRTNKQ 386
              I+GK++N+Q
Sbjct: 1956 LQIKGKKSNEQ 1966

May play a role in transcriptional regulation.
Gallus gallus (taxid: 9031)

>sp\|A6H619\|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus GN=Phrf1 PE=1 SV=2	Back alignment and function description

>sp\|Q9P1Y6\|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens GN=PHRF1 PE=1 SV=3	Back alignment and function description

>sp\|Q9UIF8\|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens GN=BAZ2B PE=1 SV=3	Back alignment and function description

>sp\|Q9NRL2\|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens GN=BAZ1A PE=1 SV=2	Back alignment and function description

>sp\|Q5F3R2\|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1	Back alignment and function description

>sp\|Q80Y84\|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1	Back alignment and function description

>sp\|Q9UGL1\|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3	Back alignment and function description

>sp\|Q3UXZ9\|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2	Back alignment and function description

>sp\|P29375\|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1587
224146085		1539	predicted protein [Populus trichocarpa]	0.777	0.801	0.464	0.0
449455338		1567	PREDICTED: uncharacterized protein LOC10	0.693	0.701	0.442	0.0
356495780		1177	PREDICTED: uncharacterized protein LOC10	0.616	0.831	0.443	0.0
357481033		1457	Bromodomain adjacent to zinc finger doma	0.862	0.938	0.384	0.0
449474393		1116	PREDICTED: uncharacterized protein LOC10	0.595	0.846	0.462	0.0
297737268		1382	unnamed protein product [Vitis vinifera]	0.511	0.587	0.499	0.0
356540345		1149	PREDICTED: uncharacterized protein LOC10	0.603	0.832	0.436	0.0
147820730		1761	hypothetical protein VITISV_029609 [Viti	0.538	0.484	0.465	0.0
356541050		966	PREDICTED: uncharacterized protein LOC10	0.556	0.914	0.422	0.0
255589873		1087	hypothetical protein RCOM_2156040 [Ricin	0.486	0.710	0.461	0.0

>gi\|224146085\|ref\|XP_002325874.1\| predicted protein [Populus trichocarpa] gi\|222862749\|gb\|EEF00256.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  977 bits (2525), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 647/1393 (46%), Positives = 817/1393 (58%), Gaps = 159/1393 (11%)

Query: 1    MSRKNRMRAESGTCNVCFAPCSSCMHLNLALMGSKTEEFSDETCRETTGSQYSINEADDL 60
            M RK R   ESGTCNVC APCSSCMHL LA MGSK +EFSDETCR T  SQYS N+ D L
Sbjct: 23   MRRKVRTSTESGTCNVCSAPCSSCMHLKLACMGSKGDEFSDETCRVTASSQYSNNDGDGL 82

Query: 61   RSFKRGPCNKLQQTASEASNPLSVNSSHDSFSVNAESKVTLRSSEISDASEDFEIHPKFS 120
             SFK    + LQ T SEASNPLSV+SSHDS S NAESKV  +SS+ +DAS + ++ PK S
Sbjct: 83   VSFKSRARDSLQHTTSEASNPLSVSSSHDSLSENAESKVNRKSSD-ADASAESQMRPKMS 141

Query: 121  SRGGTAEGQISPKLEIGLDQRISLNKYDDPKGAEGLDDNISCVSRANDTSTALSENNRNM 180
            S    AE Q SPK E   DQ+       D K  EG DDN+SCVSRAND S  +S  N+N+
Sbjct: 142  SGRAVAEDQFSPKAESFPDQKTFSKNNVDSKSEEGHDDNMSCVSRANDASKVVSYYNKNL 201

Query: 181  DIKN----------------LSHSSAS---------VCSLGPEGLEKAQSSEK--LELSE 213
            D+KN                 SH S S          CS  P+   K  SS      L E
Sbjct: 202  DMKNCLPSSALEVEGSGKAPFSHKSGSFETPSNDVDACSSSPKVQTKCLSSNSNGKHLDE 261

Query: 214  IPSVEKVGA--SCGSPKVR-------------------SPVPDSQSDKR--LVESSSDVL 250
             P++   G    C + +V                      + D+ ++ +  L   SS V 
Sbjct: 262  DPALHDHGKRFECPTEQVNLSLSKEASANIDCVGNLAAHNIADNNANGKSTLNADSSKVS 321

Query: 251  TKVHQKSEAETDRDNGEPPDEALKCLDKDKEELTSTQLAELPDVQR--FPAASGDETDES 308
             K++ K E E D D+G+  DE  KC D+ + +    +  EL D+Q     +ASGDE+DES
Sbjct: 322  CKINSKLELEADEDSGDQADEGFKCSDQVERKEKLNESDELADMQEPMLQSASGDESDES 381

Query: 309  DIMEQD-------------------VKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEM 349
            +I+E D                   VKVCDICGDAGRED LAICSRC+DGAEH YCM+EM
Sbjct: 382  EILEHDNLFLHSLFNLLILHSGGLKVKVCDICGDAGREDFLAICSRCADGAEHIYCMREM 441

Query: 350  LQKVPEGDWLCEECKFAEETEKQKQGSDIEGKRTNKQSTSTQSSGKRHAENLDAAPAAKR 409
            LQK+PEGDWLCEECK AEE E QKQ  D E KR N    STQSSGKRHAE+++ A A KR
Sbjct: 442  LQKLPEGDWLCEECKLAEEAENQKQ--DAEEKRMN--VASTQSSGKRHAEHMELASAPKR 497

Query: 410  QAIETSPGYPKPLSPSKAAALSRDSSFKSLDKGKVR---PVTFGNNSSNDVVETAR-SPG 465
            QA E+S   PK  SPS+ AA+SRD+SFKSLDKGKV+     +FGN S+ D+ E AR S  
Sbjct: 498  QATESSLASPKSCSPSRIAAVSRDTSFKSLDKGKVKIAHQTSFGNRSNIDIPEIARPSVN 557

Query: 466  GLLPQTTKGTLLKSSSFSTLNSKAKVKLVDEVVPQKQKATRDQASLDVKEGPSRVMGKSM 525
            G   QT KG LLKS SF+TLNSK KVKLVDE VPQK K  R ++SLD+KEG +R+M KSM
Sbjct: 558  GPHVQTPKGALLKSKSFNTLNSKMKVKLVDE-VPQKHKGAR-ESSLDMKEGAARMMRKSM 615

Query: 526  SFKSTSSGRSSAGESKLRALSPRPSRLHDLKGLKQVKERNAFERKSLSRLDR----SLTV 581
            SFKS SSGRSS  E K++ LS + S + D +GLKQVK+ +A +RK + RL R    S+T 
Sbjct: 616  SFKSASSGRSSTNELKVKMLSSKFSHIQDSRGLKQVKDWDAVDRKKMLRLGRPPGSSMTS 675

Query: 582  SSMATPASTPKADQKLTPRGEAVSFSSASNNREAKVVKSEGKGSTLTKSNSTLPRKGLEV 641
            S++    STPK DQ  TPRGE+V  SS  NNRE K  +S GK  TL++S S +  KG + 
Sbjct: 676  SAV---VSTPKVDQGFTPRGESVIASSTGNNRELKSAQSNGKLGTLSRSTSNVGCKGADT 732

Query: 642  SGTPVGALSTSAMCSSSVEQKPNLVSPKEEPSSSSSEKPSTIVNELVQDGLPRSVESTNQ 701
            S T V A S + + S+S EQK N +SPK+EPSSSS    S     L QDGLPRS ES+NQ
Sbjct: 733  SVTSVQASSKNGISSNSAEQKLNQISPKDEPSSSSWNAASNATENL-QDGLPRSRESSNQ 791

Query: 702  GEKS---SSCRSRPTLTAGSKGVLCQKCKEVGHDVESCPLGSTQVSGIDVSAGRNCREGM 758
            GEK+   S  R RPT   G K V CQKCKE+ H  E+C + S   SG DVSA R  RE M
Sbjct: 792  GEKARENSLSRLRPTGITGLKNVPCQKCKEICHATENCTVVSPLASGTDVSASRIPREEM 851

Query: 759  IKGNKLKAAIE-AAMHKLPGTYGRNKVNDQLDGLGITNMDLNCERSSQDQFSVSNKMK-- 815
             KG KLKAAIE AAM K PG Y + K  DQ DGL  +N+D + E +SQDQ SV NK+   
Sbjct: 852  SKGRKLKAAIEAAAMLKKPGIYRKKKEIDQSDGLSSSNVDESGEMASQDQLSVLNKLSEG 911

Query: 816  --------GAQEVLINKQTTINQL----------------------------------KP 833
                    GA      K T IN +                                  K 
Sbjct: 912  TDEGQANIGASSSEFCKSTIINNVKQLNEHSNDAVCPFKVGSDSIAPYLGTSVHASAEKS 971

Query: 834  ALLKISAVPEHEYIWQGGFEVHRGEKLPNLCDGIQAHLSSCASSKVLEVVSKFPQRIRLK 893
             L K+SA+PEHEYIWQG FEVHR EK+ +L DGIQAHLS+CAS KVL+VVSKFPQ+I+L 
Sbjct: 972  VLTKMSAIPEHEYIWQGVFEVHRAEKVVDLYDGIQAHLSTCASPKVLDVVSKFPQKIKLD 1031

Query: 894  EVPRVSTWPTMFHESGAKEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIE 953
            EVPR+STWP  F  +GAKEENIALYFFAK+FESY  NYK L+D+M+K DLAL G+ +G+E
Sbjct: 1032 EVPRISTWPRQFLVTGAKEENIALYFFAKNFESY-ENYKRLLDNMIKKDLALKGSFEGVE 1090

Query: 954  LLIFPSNQLPENCQRWNLLFFLWGVFRVRKVNCSNSTKHSCFAGSKMVPLDRVITTDNLS 1013
              IFPS QLPEN QRWN+L+FLWGVFR R+ +CS+S K         VP D+ I    ++
Sbjct: 1091 FFIFPSTQLPENSQRWNMLYFLWGVFRGRRSDCSDSFKKLVMPSLNGVPRDKDIPAAVMT 1150

Query: 1014 LSQNI-LPKHADKDSAACDT--SHNIVPGSYGPDGTCVTLNENCDNKASSVQLTSLGSQS 1070
             S+N+ +P+   K+++ACD+  S ++   +  P+   V+LN N D+K          SQ+
Sbjct: 1151 SSENLCVPECIVKNTSACDSPCSSDVHLAANAPEKPSVSLNGNSDDKV-------FNSQT 1203

Query: 1071 NSIQHDGRFDSRLLSRAAMTVPLLSGEIRCARPPLEECNLAEGGLGTEVKSSLQATRTSI 1130
            N  + DG+ DSR L++   +      E RC+ P LEE       L  + K   + TRT+ 
Sbjct: 1204 NLEKQDGKVDSRSLTKIRGSSTPWCPEARCSSPSLEEVGPPRCSLDVDPKPCTEVTRTNS 1263

Query: 1131 SCSKGGTSEMNGDASLGEDSSSLKNFPVGNEGAHDEGSVDSGKVPGIMKCGRGQINLEED 1190
                       G + LGED    K F VG++ +         K+       +  I +E D
Sbjct: 1264 VSDVKEIQIHEGASCLGED-MPFKIFGVGSQNSGCRRIFGEDKIVDRTFSDKDNIIVERD 1322

Query: 1191 LNEGSFDVEKVPDIMESGRDQINLERDLNKGTFDADKIPVITKSGRDQINLER-DLNESI 1249
            LNE + +++     +E+   +   +R      + +D  P+I+ S   +    + D N ++
Sbjct: 1323 LNEDNVNID-----VETFSGKGPRKRPF---LYLSDTAPLISSSMTQKAPWNKADNNNTL 1374

Query: 1250 VDGKIVPDKIKSG 1262
            VDG+ +  K+K+G
Sbjct: 1375 VDGESISKKLKTG 1387

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449455338\|ref\|XP_004145410.1\| PREDICTED: uncharacterized protein LOC101208726 [Cucumis sativus] gi\|449515520\|ref\|XP_004164797.1\| PREDICTED: uncharacterized LOC101211560 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356495780\|ref\|XP_003516751.1\| PREDICTED: uncharacterized protein LOC100806749 [Glycine max]	Back alignment and taxonomy information

>gi\|357481033\|ref\|XP_003610802.1\| Bromodomain adjacent to zinc finger domain protein 2B [Medicago truncatula] gi\|355512137\|gb\|AES93760.1\| Bromodomain adjacent to zinc finger domain protein 2B [Medicago truncatula]	Back alignment and taxonomy information

>gi\|449474393\|ref\|XP_004154159.1\| PREDICTED: uncharacterized protein LOC101211560, partial [Cucumis sativus]	Back alignment and taxonomy information

>gi\|297737268\|emb\|CBI26469.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356540345\|ref\|XP_003538650.1\| PREDICTED: uncharacterized protein LOC100806639 [Glycine max]	Back alignment and taxonomy information

>gi\|147820730\|emb\|CAN63105.1\| hypothetical protein VITISV_029609 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356541050\|ref\|XP_003538996.1\| PREDICTED: uncharacterized protein LOC100784908 [Glycine max]	Back alignment and taxonomy information

>gi\|255589873\|ref\|XP_002535114.1\| hypothetical protein RCOM_2156040 [Ricinus communis] gi\|223524008\|gb\|EEF27270.1\| hypothetical protein RCOM_2156040 [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1587
TAIR\|locus:2029147		431	AT1G43770 "AT1G43770" [Arabido	0.085	0.313	0.387	1.3e-22
TAIR\|locus:2141010		187	AT4G17850 [Arabidopsis thalian	0.071	0.604	0.333	7.7e-14
UNIPROTKB\|E2RP59		2073	BAZ2B "Uncharacterized protein	0.080	0.061	0.295	1.1e-07
UNIPROTKB\|E2RP61		2169	BAZ2B "Uncharacterized protein	0.080	0.058	0.295	1.4e-07
UNIPROTKB\|F1P2F7		2125	BAZ2B "Bromodomain adjacent to	0.078	0.058	0.303	1.9e-07
UNIPROTKB\|E1C3I8		2126	BAZ2B "Bromodomain adjacent to	0.078	0.058	0.303	1.9e-07
UNIPROTKB\|Q9DE13		2130	BAZ2B "Bromodomain adjacent to	0.078	0.058	0.303	1.9e-07
TAIR\|locus:2159396		227	AT5G61100 [Arabidopsis thalian	0.045	0.321	0.373	2.1e-07
TAIR\|locus:2159406		161	AT5G61110 [Arabidopsis thalian	0.040	0.403	0.358	2.2e-07
UNIPROTKB\|F1NRC4		1510	KDM5B "Lysine-specific demethy	0.112	0.117	0.289	3.8e-07

TAIR\|locus:2029147 AT1G43770 "AT1G43770" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 238 (88.8 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
 Identities = 55/142 (38%), Positives = 81/142 (57%)

Query:   847 IWQGGFEVHRGEKLPNLC--DGIQAHLSSCASSKVLEVVSKFPQRIRLKEVPRVSTWPTM 904
             IW+G   V  G    N C  DGI AH+SS A  KV E  S    R+  + +PR+  WP  
Sbjct:   292 IWRGLMSVKGG----NSCTMDGIVAHVSSLACPKVHETASSLKGRLSAEILPRLEVWPKT 347

Query:   905 FHESGA-KEENIALYFFAKDFESYGRNYKILVDSMMKNDLALMGNLDGIELLIFPSNQLP 963
             F ++G  K+E++AL+FF     +  + +  LVD M KND A+   L+  ELL+F S  LP
Sbjct:   348 FLKNGGPKDESVALFFFPSSESNDEKVFDSLVDKMKKNDSAMRCVLNDAELLLFTSYMLP 407

Query:   964 ENCQRWNLLFFLWGVFRVRKVN 985
             ++   +N  ++LWGVF+ R+ +
Sbjct:   408 KDSWTFNSKYYLWGVFKPRQTS 429

GO:0003677 "DNA binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

TAIR\|locus:2141010 AT4G17850 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RP59 BAZ2B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RP61 BAZ2B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|F1P2F7 BAZ2B "Bromodomain adjacent to zinc finger domain protein 2B" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|E1C3I8 BAZ2B "Bromodomain adjacent to zinc finger domain protein 2B" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9DE13 BAZ2B "Bromodomain adjacent to zinc finger domain protein 2B" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

TAIR\|locus:2159396 AT5G61100 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2159406 AT5G61110 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|F1NRC4 KDM5B "Lysine-specific demethylase 5B" [Gallus gallus (taxid:9031)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1587
pfam00628		51	pfam00628, PHD, PHD-finger	3e-06
smart00249		47	smart00249, PHD, PHD zinc finger	5e-06

>gnl\|CDD\|201356 pfam00628, PHD, PHD-finger	Back alignment and domain information

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 317 VCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQ--KVPEGDWLCEECKFA 366
            C +CG    +  L +C  C     H  C+   L+  ++PEG+W C ECK  
Sbjct: 1   YCAVCGKVDDDGELLLCDGCDRWF-HLACLGPPLEPEEIPEGEWYCPECKPK 51

PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner to that of the RING and FYVE domains. Several PHD fingers have been identified as binding modules of methylated histone H3. Length = 51

>gnl\|CDD\|214584 smart00249, PHD, PHD zinc finger	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1587
KOG1244		336	consensus Predicted transcription factor Requiem/N	99.89
KOG1512		381	consensus PHD Zn-finger protein [General function	99.67
KOG4443		694	consensus Putative transcription factor HALR/MLL3,	99.11
KOG0825		1134	consensus PHD Zn-finger protein [General function	98.97
PF00628		51	PHD: PHD-finger; InterPro: IPR019787 Zinc finger (	98.37
KOG4299		613	consensus PHD Zn-finger protein [General function	98.21
cd04718		148	BAH_plant_2 BAH, or Bromo Adjacent Homology domain	98.09
smart00249		47	PHD PHD zinc finger. The plant homeodomain (PHD) f	97.99
KOG0383		696	consensus Predicted helicase [General function pre	97.86
KOG1973		274	consensus Chromatin remodeling protein, contains P	97.83
KOG1245		1404	consensus Chromatin remodeling complex WSTF-ISWI,	97.79
COG5034		271	TNG2 Chromatin remodeling protein, contains PhD zi	97.54
KOG0955		1051	consensus PHD finger protein BR140/LIN-49 [General	97.49
KOG0957		707	consensus PHD finger protein [General function pre	97.38
KOG4323		464	consensus Polycomb-like PHD Zn-finger protein [Gen	97.34
KOG0954		893	consensus PHD finger protein [General function pre	96.98
COG5141		669	PHD zinc finger-containing protein [General functi	96.7
KOG0956		900	consensus PHD finger protein AF10 [General functio	96.49
KOG1246		904	consensus DNA-binding protein jumonji/RBP2/SMCY, c	96.06
PF13831		36	PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A.	95.28
KOG1473		1414	consensus Nucleosome remodeling factor, subunit NU	91.97
PF15446		175	zf-PHD-like: PHD/FYVE-zinc-finger like domain	90.8
KOG1473		1414	consensus Nucleosome remodeling factor, subunit NU	90.67
KOG4443		694	consensus Putative transcription factor HALR/MLL3,	88.32
KOG1244		336	consensus Predicted transcription factor Requiem/N	88.28
KOG0957		707	consensus PHD finger protein [General function pre	85.33
PF00628		51	PHD: PHD-finger; InterPro: IPR019787 Zinc finger (	84.34

>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription]	Back alignment and domain information

Probab=99.89  E-value=2.3e-24  Score=234.64  Aligned_cols=108  Identities=24%  Similarity=0.531  Sum_probs=101.9

Q ss_pred             cccccccccccccccccccCCCCCCCCCccccCCC--CCCCCCCcCCcCCC-cccCCCCCCCCCCCCCcccccccccccc
Q 000388          244 ESSSDVLTKVHQKSEAETDRDNGEPPDEALKCLDK--DKEELTSTQLAELP-DVQRFPAASGDETDESDIMEQDVKVCDI  320 (1587)
Q Consensus       244 ~~Ts~~~C~~C~~~ee~nk~~~~gepEELL~Cs~C--s~HpSCLd~s~e~s-~ikky~WQs~DE~DedDci~~DckvC~V  320 (1587)
                      ..-++.+|.||+++..+|++  .+.||+||.|++|  ++||+||+++..|. .+++|.||         ||  +|+.|.+
T Consensus       220 ~a~Pn~YCDFclgdsr~nkk--t~~peelvscsdcgrsghpsclqft~nm~~avk~yrwq---------ci--eck~csi  286 (336)
T KOG1244|consen  220 IAQPNPYCDFCLGDSRENKK--TGMPEELVSCSDCGRSGHPSCLQFTANMIAAVKTYRWQ---------CI--ECKYCSI  286 (336)
T ss_pred             cccCCcccceeccccccccc--cCCchhhcchhhcCCCCCcchhhhhHHHHHHHHhheee---------ee--ecceecc
Confidence            35678899999999988886  9999999999999  89999999999988 78899999         77  9999999


Q ss_pred             cccccCCCCeEEeCCCCCCCCCccccCcccCCCCCCCccCccCcc
Q 000388          321 CGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKF  365 (1587)
Q Consensus       321 Cg~~gded~LLlCD~CDrGaYH~yCL~PPL~eVPeGdW~Cp~C~~  365 (1587)
                      ||..+++++|||||.|||| ||||||.|||.+.|+|.|.|..|..
T Consensus       287 cgtsenddqllfcddcdrg-yhmyclsppm~eppegswsc~KOG~  330 (336)
T KOG1244|consen  287 CGTSENDDQLLFCDDCDRG-YHMYCLSPPMVEPPEGSWSCHLCLE  330 (336)
T ss_pred             ccCcCCCceeEeecccCCc-eeeEecCCCcCCCCCCchhHHHHHH
Confidence            9999999999999999999 9999999999999999999999974

>KOG1512 consensus PHD Zn-finger protein [General function prediction only]	Back alignment and domain information

>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only]	Back alignment and domain information

>KOG0825 consensus PHD Zn-finger protein [General function prediction only]	Back alignment and domain information

>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

>KOG4299 consensus PHD Zn-finger protein [General function prediction only]	Back alignment and domain information

>cd04718 BAH_plant_2 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function	Back alignment and domain information

>smart00249 PHD PHD zinc finger	Back alignment and domain information

>KOG0383 consensus Predicted helicase [General function prediction only]	Back alignment and domain information

>KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics]	Back alignment and domain information

>KOG1245 consensus Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains) [Chromatin structure and dynamics]	Back alignment and domain information

>COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]	Back alignment and domain information

>KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only]	Back alignment and domain information

>KOG0957 consensus PHD finger protein [General function prediction only]	Back alignment and domain information

>KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only]	Back alignment and domain information

>KOG0954 consensus PHD finger protein [General function prediction only]	Back alignment and domain information

>COG5141 PHD zinc finger-containing protein [General function prediction only]	Back alignment and domain information

>KOG0956 consensus PHD finger protein AF10 [General function prediction only]	Back alignment and domain information

>KOG1246 consensus DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain [General function prediction only]	Back alignment and domain information

>PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A	Back alignment and domain information

>KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription]	Back alignment and domain information

>PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain	Back alignment and domain information

>KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription]	Back alignment and domain information

>KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only]	Back alignment and domain information

>KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription]	Back alignment and domain information

>KOG0957 consensus PHD finger protein [General function prediction only]	Back alignment and domain information

>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1587
1f62_A		51	Wstf-Phd Length = 51		2e-04

>pdb|1F62|A Chain A, Wstf-Phd Length = 51

Back alignment and structure

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFA 366
           C +C   G +D L +C  C+  A H +C++  L +VP+G+W C  C+ A
Sbjct: 3   CKVCRKKGEDDKLILCDECNK-AFHLFCLRPALYEVPDGEWQCPACQPA 50

PyMOL of 1f62

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1587
2e6r_A		92	Jumonji/ARID domain-containing protein 1D; PHD dom	4e-14
1f62_A		51	Transcription factor WSTF; Zn-finger; NMR {Homo sa	4e-13
2kwj_A		114	Zinc finger protein DPF3; acetyl-lysine, transcrip	9e-11
1fp0_A		88	KAP-1 corepressor; PHD domain, C3HC4 type zinc bin	1e-10
3asl_A		70	E3 ubiquitin-protein ligase UHRF1; histone reader	2e-10
2e6s_A		77	E3 ubiquitin-protein ligase UHRF2; PHD domain, str	3e-10
2l43_A		88	N-teminal domain from histone H3.3, linker, PHD1 f	4e-10
3shb_A		77	E3 ubiquitin-protein ligase UHRF1; unmodified hist	4e-10
2ysm_A		111	Myeloid/lymphoid or mixed-lineage leukemia protein	5e-10
2ysm_A		111	Myeloid/lymphoid or mixed-lineage leukemia protein	1e-08
2ku3_A		71	Bromodomain-containing protein 1; PHD finger, chro	8e-10
3ask_A		226	E3 ubiquitin-protein ligase UHRF1; histone reader	1e-09
2yql_A		56	PHD finger protein 21A; PHD domain, structural gen	1e-09
3v43_A		112	Histone acetyltransferase KAT6A; MOZ, PHD finger,	2e-09
2puy_A		60	PHD finger protein 21A; PHD finger, histone CODE,	4e-09
1mm2_A		61	MI2-beta; PHD, zinc finger, protein scaffold, DNA	5e-09
1xwh_A		66	Autoimmune regulator; PHD domain, Zn binding domai	1e-08
1wev_A		88	Riken cDNA 1110020M19; structural genomics, PHD do	1e-08
2l5u_A		61	Chromodomain-helicase-DNA-binding protein 4; CHD4,	2e-08
2yt5_A		66	Metal-response element-binding transcription facto	1e-07
2k16_A		75	Transcription initiation factor TFIID subunit 3; p	2e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-04
2ro1_A		189	Transcription intermediary factor 1-beta; KAP, TIF	2e-06

>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 92	Back alignment and structure

 Score = 68.4 bits (167), Expect = 4e-14
 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 1/83 (1%)

Query: 300 ASGDETDESDIMEQDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWL 359
            S   +  S     D  +C +C     +D L  C  C D   H +C+   L ++P G W 
Sbjct: 1   GSSGSSGHSSAQFIDSYICQVCSRGDEDDKLLFCDGC-DDNYHIFCLLPPLPEIPRGIWR 59

Query: 360 CEECKFAEETEKQKQGSDIEGKR 382
           C +C  AE  +  +     +  +
Sbjct: 60  CPKCILAECKQPPEAFGFEQATQ 82

PyMOL of 2e6r

>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 51	Back alignment and structure

>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* Length = 114	Back alignment and structure

>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 88	Back alignment and structure

>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B Length = 70	Back alignment and structure

>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 77	Back alignment and structure

>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} Length = 88	Back alignment and structure

>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens} Length = 77	Back alignment and structure

>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111	Back alignment and structure

>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111	Back alignment and structure

>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} Length = 71	Back alignment and structure

>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens} Length = 226	Back alignment and structure

>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 56	Back alignment and structure

>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112	Back alignment and structure

>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} Length = 60	Back alignment and structure

>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A Length = 61	Back alignment and structure

>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A Length = 66	Back alignment and structure

>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 Length = 88	Back alignment and structure

>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} Length = 61	Back alignment and structure

>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus} Length = 66	Back alignment and structure

>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* Length = 75	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens} Length = 189	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		1587
d1f62a_		51	g.50.1.2 (A:) Williams-Beuren syndrome transcripti	2e-12
d1fp0a1		70	g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-	7e-11
d1mm2a_		61	g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens	5e-09
d1weva_		88	g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu	8e-08
d1weea_		72	g.50.1.2 (A:) PHD finger protein At1g33420 {Thale	7e-07
d1wema_		76	g.50.1.2 (A:) Death associated transcription facto	2e-05
d1wesa_		71	g.50.1.2 (A:) PHD Inhibitor of growth protein 2, I	3e-05
d2pnxa1		51	g.50.1.2 (A:195-245) Inhibitor of growth protein 4	5e-05
d1we9a_		64	g.50.1.2 (A:) PHD finger protein At5g26210 {Thale	6e-05
d1wepa_		79	g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus mus	6e-05

>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Length = 51	Back information, alignment and structure


class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Williams-Beuren syndrome transcription factor, WSTF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.1 bits (148), Expect = 2e-12
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 318 CDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFA 366
           C +C   G +D L +C  C + A H +C++  L +VP+G+W C  C+ A
Sbjct: 3   CKVCRKKGEDDKLILCDEC-NKAFHLFCLRPALYEVPDGEWQCPACQPA 50

PyMOL of d1f62a_

>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Length = 70	Back information, alignment and structure

>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Length = 61	Back information, alignment and structure

>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88	Back information, alignment and structure

>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72	Back information, alignment and structure

>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76	Back information, alignment and structure

>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 71	Back information, alignment and structure

>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} Length = 51	Back information, alignment and structure

>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64	Back information, alignment and structure

>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Length = 79	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1587
d1fp0a1		70	Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo	99.07
d1f62a_		51	Williams-Beuren syndrome transcription factor, WST	98.92
d1mm2a_		61	Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606	98.75
d1weva_		88	PHD finger protein 22 {Mouse (Mus musculus) [TaxId	98.54
d1wesa_		71	PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu	98.36
d2pnxa1		51	Inhibitor of growth protein 4, Ing4 {Homo sapiens	97.96
d1weea_		72	PHD finger protein At1g33420 {Thale cress (Arabido	97.91
d1we9a_		64	PHD finger protein At5g26210 {Thale cress (Arabido	97.58
d1wema_		76	Death associated transcription factor 1, Datf1 (DI	97.4
d1wepa_		79	PHD finger protein 8 {Mouse (Mus musculus) [TaxId:	97.15
d1wewa_		78	Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop	97.13
d1fp0a1		70	Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo	92.8
d1f62a_		51	Williams-Beuren syndrome transcription factor, WST	89.78
d1weva_		88	PHD finger protein 22 {Mouse (Mus musculus) [TaxId	89.65
d1mm2a_		61	Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606	87.59

>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Nuclear corepressor KAP-1 (TIF-1beta)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=4.5e-11  Score=87.11  Aligned_cols=53  Identities=28%  Similarity=0.753  Sum_probs=46.0

Q ss_pred             CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             321120001346798807718899998876665733599999974385476410000
Q 000388          314 DVKVCDICGDAGREDLLAICSRCSDGAEHTYCMKEMLQKVPEGDWLCEECKFAEETE  370 (1587)
Q Consensus       314 DCkvC~VCg~~gdEd~LLlCD~CDrGaYHlyCL~PPL~eVPeGdW~Cp~C~~~~ec~  370 (1587)
                      .|.+|.+|++.++   ||+||.|+++ ||++|+.|||..+|.++|+|+.|.......
T Consensus         6 ~c~~C~~C~~~~~---ll~Cd~C~~~-~H~~C~~p~l~~~p~~~W~C~~C~~~~~~~   58 (70)
T d1fp0a1           6 SATICRVCQKPGD---LVMCNQCEFC-FHLDCHLPALQDVPGEEWSCSLCHVLPDLK   58 (70)
T ss_dssp             SSSCCSSSCSSSC---CEECTTSSCE-ECTTSSSTTCCCCCSSSCCCCSCCCCCSSC
T ss_pred             CCCCCCCCCCCCE---EEECCCCCHH-HCCCCCCCCCCCCCCCCEECCCCCCCCCCC
T ss_conf             9799877799697---8889999915-635148998684889898996794837667

PyMOL of d1fp0a1

>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]}	Back information, alignment and structure

>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure