Citrus Sinensis ID: 000391

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580--

MCSMCHHCGAELTRVKKEERKQENGKSLKLNNEGSIWSCRICGEKQEREYLKPENSSPFSTPMISPTTSLSSNDRSFSSCSEFSVDGNSNDRSDQDEGATNSNRGDASFRTNGRLQNSHLEGPVNELDRSNKMNGSNNLKDGGIGNDNDVVREVEIMQPSDGQEAKVNGAENISRPHNNASEISQSTDNDNEMDMQIWEPPEPEDPEDDIEGSIAYNDDDEDEECGDGTKWGKPSSLSHFRDEGGGRLKFKEEKQRAMEKVVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLSSSGLSSFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVAGILPMEQQHPALENGNSNVSCFEHSSVESGSSTMDIPISNGFHEDGSYANSGPEGESILSYEPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYPSLTSYFGFRGREQSGQITEDVPVSTIMDASLDGPCDTEAKSSSDEEKSLDGQPTSLPSCPEAPLSMGKDCGNDEDHSQSQEDANASLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKEFSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDRRLHSLLLPDPTVVITGATEKPGPEQTKVKMDGTTAKGNEVPEPEVDSGNGDNVSNNFGNLEVLPDVAAEADELVVKEIPIDGPDRESGERDHKKTTVLKDVETSIASDLSSTSLANEDSMVRSNVSDYLSGDDNVQAGKFLMSENLQVDKVVPNSQYLANSGSVVDPNASKNETSTHSLLSDLEKLNGWFWMPFSELQQIYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLGAENYMVSDYEGELSSIIACALAVLKEMPLSTVVFNEDSGRDGDMAVKTIDSLRSLTRIPTMASSLWSVNGSSDSDSIYASLSISSEDSRFSSFDGLNLLESLIPPEVLSPEVSIGISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNVSGNLI

cccccHHccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEccccccccEEEEEEEEEccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHcccEEEEEccHHHHHHHHHHHccccccccccccccccccccEEEEEEEcccccccccccccccEEEEEEcccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEcccccccccccEEEEEccccccccHHHHHHHHHHccccccccccccccccEEEEEEccEEEEEEEEEccccccccccccccEEEEEccccccccccccccccEEEcccccccccHHHHHHHccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEEccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccccccHHHHccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccEEEEEEEEHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHcccccccHHEEEEEEEEEEEccccccEEEEEEEEEEEcccccccccEEEccccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccc

cccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccEEEccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccEEEEccccccccccccccccccccHHHHEEEHHcccccccccccccccHHHEHHHHHHcccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccEEEEEEEccccccccEEEEEEEEEcccccccccccccccEEEEEcccEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEEEccHHHHHHHHHHHcccEEEccccccHHcccccEEEEEEEEcccccccccccccccEEEEEEccccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccEccccccccccccccccccccccHHHHHHHHHHHHcccccccccHccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccHHHHHccccccccccccccccccccccEccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEccccccccccccEEEEEEcccccccHHHHHHHHHcccccccccccccHHHHHEEEEccccEEEEEEEEcccccccccccccEEEEEEEcccccccccccccccEEEEEcHHHcccHHHEEEEEEccHHHHHHHcHccccccHHHHHHHccccEEEEEEEccEEEEEEEccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHcccccccHHHHHHHHccccccccccHHHHccccccccccccccccEEEEEccccccHHHHHHcccccHccccccHcccccccccccccccccccccccccccccccHHHcccccccHHccccccccccccccccccccccccccccccccccEEEEEcccccccEEEEEEEEEHHHHHHHHHHccccHHHHHHHHHHcccccccccccccEEEEcccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHEEEEEEEEEEccccccEEEEEEEEHHHHHcccccEEEEEcccccccccccccccccEEEEcHHHHHHcccccEEEcHHHHHHHHHHHHHHHHHHHHHHccc

mcsmchhcgaelTRVKKEErkqengkslklnnegsiwscricgekqereylkpensspfstpmispttslssndrsfsscsefsvdgnsndrsdqdegatnsnrgdasfrtngrlqnshlegpvneldrsnkmngsnnlkdggigndndVVREVeimqpsdgqeakvngaenisrphnnaseisqstdndnemdmqiweppepedpeddiegsiayndddedeecgdgtkwgkpsslshfrdegggrlkfKEEKQRAMEKVVSGKFKAIVSQLLKSVGvvssgkdgeSWVDIVTSLSWEaasslrpgsvdgksldlnSYIKVKCIAAGSRNQSQIIKGLVFkkhaahkhmpteyknprLLLIRGVLglsssglssFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVArctgspilssgsltsqklkhcDSFYIKKFVEehagfreggkrpsktlmfiegcptrlgctvllkgsnsdelKRIKSVVQCAVVMAYHLILETSFlvdqramfstipfaevagilpmeqqhpalengnsnvscfehssvesgsstmdipisngfhedgsyansgpegesilsyepynpavfsGFSSLSASLRKvigdnfplssaaaypsltsyfgfrgreqsgqitedvpvstimdasldgpcdteaksssdeeksldgqptslpscpeaplsmgkdcgndedhsqsqedanasldSQSILVLMSSRNalrgticeqshfshimfyknfdvplgkflqdnllnqrkqcascselpeahFYYYARHNKQLTIRVKrlpdrirlsgeaegklwmwsrcgrcktangvpkstKRVVISTAACGLSFGKFLElsfshhssstrlsscghslhrdflyffglgpmvgmfkyspfttynmcvppqkleFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRfvgstlnlqgslkefSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDrrlhslllpdptvvitgatekpgpeqtkvkmdgttakgnevpepevdsgngdnvsnnfgnlevlpdvaaEADELVvkeipidgpdresgerdhkktTVLKDVETSIasdlsstslanedsmVRSNVsdylsgddnvqaGKFLmsenlqvdkvvpnsqylansgsvvdpnasknetstHSLLSDLEklngwfwmpfSELQQIYMKDlqrgfvpkfecvsrytpehlpTVYQLISEegtrmhiplgaenymvsDYEGELSSIIACALAVLkemplstvvfnedsgrdgdmAVKTIDSLrsltriptmASSLwsvngssdsdsiYASLsissedsrfssfdglnlleslippevlspevsigiskslgkgkysVKCLYANqfrdlrsrccpselayIDSLSrcrnwdakggksksfFVKTLDDRFIIKEIkktefdsfDKFALHYFKYMnesfdsgnQTCLAKVLGIYqvtirqpksgkemRHDLMVMENLTFERNITRQYDLKGALHARynttvdgsgdvlldqnfvndmnssplyvsnTAKRILQRAVWNDTTFLNVSGNLI

mcsmchhcgaeltrvkkeerkqengkslklnnegsiwsCRICGEKQEREYLKpensspfstpmisPTTSLSSNDRSFSSCSEFSVdgnsndrsdqdegatnsnrgdasfrtngrlqnshlegpvneldrsnkmngsnnlkdggignDNDVVREVEIMQPSDGQEAKVNgaenisrphnnaseisqstdndNEMDMQIWEPPEPEDPEDDIEGSIAYNDDDEDEECGdgtkwgkpsslshfrdegggrlkfkeEKQRAMEKVVSGKFKAIVSQLLKSVGvvssgkdgeSWVDIVTSLSWeaasslrpgsvdgkslDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLSSSGLSSFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCtgspilssgsltsqklkHCDSFYIKKFVEehagfreggkrpsktlMFIEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVAGILPMEQQHPALENGNSNVSCFEHSSVESGSSTMDIPISNGFHEDGSYANSGPEGESILSYEPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYPSLTSYFGFRGREQSGQITEDVPVSTIMDASLDGPCDTEAKSSsdeeksldgqptslPSCPEAPLSMGKDCGNDEDHSQSQEDANASLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLsgeaegklwmwsrcGRCKtangvpkstkrVVISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKEFSVTSEILKQERSVFEVDIQKTVakkvhsdealHKLLSLNRLRWELLIESCIWDRRLHSLLLPDPTVvitgatekpgpeqtkvkmdgttakgnevpepevdsgngdNVSNNFGNLEVLPDVAAEADELVVkeipidgpdresgerdhkkttvlkdvetsiasdlsstslanedsmVRSNVSDYLSGDDNVQAGKFLMSENLQVDKVVPNSQYLANsgsvvdpnaskNETSTHSLLSDLEKLNGWFWMPFSELQQIYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLGAENYMVSDYEGELSSIIACALAVLKEMPLSTVvfnedsgrdgdMAVKTIDSLRSLTRIPTMASSLWSVNGSSDSDSIYASLSISSEDSRFSSFDGLNLLESLIPPEVLSPEVSIGIskslgkgkysVKCLYANQFRDLRSRCCPSELAYIdslsrcrnwdakggksksffvktlddrFIIKeikktefdsfDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTirqpksgkemrhDLMVMENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQravwndttflnvsgnli

MCSMCHHCGAELTRVKKEERKQENGKSLKLNNEGSIWSCRICGEKQEREYLKPENSSPFSTPMISPTTSLSSNDRSFSSCSEFSVDGNSNDRSDQDEGATNSNRGDASFRTNGRLQNSHLEGPVNELDRSNKMNGSNNLKDGGIGNDNDVVREVEIMQPSDGQEAKVNGAENISRPHNNASEISQSTDNDNEMDMQIWeppepedpeddIEGSIAYNdddedeeCGDGTKWGKPSSLSHFRDEGGGRLKFKEEKQRAMEKVVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRlllirgvlglsssglssFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVAGILPMEQQHPALENGNSNVSCFEHSSVESGSSTMDIPISNGFHEDGSYANSGPEGESILSYEPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYPSLTSYFGFRGREQSGQITEDVPVSTIMDASLDGPCDTEAKSSSDEEKSLDGQPTSLPSCPEAPLSMGKDCGNDEDHSQSQEDANASLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAACGLSFGKFLElsfshhssstrlsscghslHRDFLYFFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKEFSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKllslnrlrwellIESCIWDRRLHSLLLPDPTVVITGATEKPGPEQTKVKMDGTTAKGNEVPEPEVDSGNGDNVSNNFGNLEVLPDVAAEADELVVKEIPIDGPDRESGERDHKKTTVLKDVETSIASDLSSTSLANEDSMVRSNVSDYLSGDDNVQAGKFLMSENLQVDKVVPNSQYLANSGSVVDPNASKNETSTHSLLSDLEKLNGWFWMPFSELQQIYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLGAENYMVSDYEGELSSIIACALAVLKEMPLSTVVFNEDSGRDGDMAVKTIDSLRSLTRIPTMASSLWSVNGssdsdsiyaslsissedsrfssFDGLNLLESLIPPEVLSPEVSIGISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNVSGNLI

**********************************SIWSCRICG*************************************************************************************************************************************************************************************************************************VVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSL****VDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLS******************SVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVAGILP******************************************************LSYEPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYPSLTSYFGFRG*********************************************************************************ILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKEFSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDRRLHSLLLPDPTVVITG*******************************************LEVLPDVAAEADELVV********************************************************************************************************LSDLEKLNGWFWMPFSELQQIYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLGAENYMVSDYEGELSSIIACALAVLKEMPLSTVVFNE********AVKTIDSLRSLTRIP*****LW**************************FDGLNLLESLIPPEVLSPEVSIGISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQ******MRHDLMVMENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNV*****

**SMCHHCGAELT*********************SIWSCRICG**********************************************************************************************************************************************************W*****************YNDDDEDEECGDGTKWGKPSSLSHFR**********EEKQRAMEKVVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLSSSGLSSFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFA**************************************************YANSGPEGESILSYEPYNPAVFSGFSSLSASL******************************************************************************************EDHSQSQEDANASLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRV***************KLWMWSRCGRCKTANG*PK***RVVISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSR************KEFSVTSEILKQERSVFEVDIQKTVAK**HSDEALHKLLSLNRLRWELLIESCIWDRRLHSL***********************************************************************************************************************************************************************************************************************************************ENYMVSDYEGELSSIIACALA*********************************************************************************************ISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSL***************FFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFERNITRQYDLKGALHA************LLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNVSGNLI

MCSMCHHCGAELTRV************LKLNNEGSIWSCRICGEKQERE***********TPMISP************************************NRGDASFRTNGRLQNSHLEGPVNELDRSNKMNGSNNLKDGGIGNDNDVVREVEIMQPSDGQEAKVNGAENISRPHNNASEISQSTDNDNEMDMQIWEPPEPEDPEDDIEGSIAYNDD**********KWGKPSSLSHFRDEGGGRLKFKEEKQRAMEKVVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLSSSGLSSFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVAGILPMEQQHPALENGNSNVSCFE********STMDIPISNGFHEDGSYANSGPEGESILSYEPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYPSLTSYFGFRGREQSGQITEDVPVSTIMDASLDG***********************PSCPEAPLSMGK*****************SLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAACGLSFGKFLELSFS**********CGHSLHRDFLYFFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKEFSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDRRLHSLLLPDPTVVITGATEKPGPEQTKVKMDGTTAKG***********NGDNVSNNFGNLEVLPDVAAEADELVVKEIPIDGP***********TTVLKDVETSIASDLSSTSLANEDSMVRSNVSDYLSGDDNVQAGKFLMSENLQVDKVVPNSQYLANSGSVVDPNASKNETSTHSLLSDLEKLNGWFWMPFSELQQIYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLGAENYMVSDYEGELSSIIACALAVLKEMPLSTVVFNEDSGRDGDMAVKTIDSLRSLTRIPTMASSLWSVNGSSDSDSIYASLSISSEDSRFSSFDGLNLLESLIPPEVLSPEVSIGISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNVSGNLI

****CHHC**EL**********************SIWSCRIC**KQE******************************************NDRSDQDEGATNSNRGDASFRTNGRLQNSHLEGPVNELDRSNKMNGSNNLK*******NDVVREVEIMQPSDGQEAKVNGAENISRPHNNASEISQSTDNDNEMDMQIWEPPEPEDPEDDIEGSIAYNDDDEDEECGDGTKWGKPSSLSHFRDEGGGRLKFKEEKQRAMEKVVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLSSSGLSSFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVAGILPMEQQHPALENGNSNV***EHSS***GSSTMDIPISNGFHE*************ILSYEPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYPSLTSYFGF************************************************************************EDANASLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKEFSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDRRLHSLLLPDPTV*IT****************************************************************************************************************************************************************************GWFWMPFSELQQIYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLGAENYMVSDYEGELSSIIACALAVLK*M*******************************************************************************VLSPEVSIGISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNVSGNLI

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1582	2.2.26 [Sep-21-2011]
Q9Z1T6		2097	1-phosphatidylinositol 3-	yes	no	0.171	0.129	0.344	5e-39
Q9Y2I7		2098	1-phosphatidylinositol 3-	yes	no	0.181	0.136	0.338	5e-38
P34756		2278	1-phosphatidylinositol 3-	yes	no	0.116	0.080	0.424	8e-36
O59722		1932	1-phosphatidylinositol 3-	yes	no	0.119	0.097	0.394	2e-35
B0G126		2656	1-phosphatidylinositol 3-	yes	no	0.110	0.065	0.427	5e-32
O96838		1809	Putative 1-phosphatidylin	yes	no	0.156	0.137	0.305	7e-28
P61112		548	Thermosome subunit alpha	N/A	no	0.144	0.416	0.270	6e-14
P61111		548	Thermosome subunit alpha	yes	no	0.144	0.416	0.270	6e-14
Q54TH8		530	T-complex protein 1 subun	no	no	0.142	0.424	0.262	1e-13
O74341		528	T-complex protein 1 subun	no	no	0.140	0.420	0.251	5e-13

>sp\|Q9Z1T6\|FYV1_MOUSE 1-phosphatidylinositol 3-phosphate 5-kinase OS=Mus musculus GN=Pikfyve PE=1 SV=3	Back alignment and function desciption

 Score =  164 bits (416), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 163/296 (55%), Gaps = 24/296 (8%)

Query: 255 QRAMEKVVSGK---FKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPG-SVD 310
           ++AME+++S       A++ QLL++  + SS      W DI+ SL  +   ++RP     
Sbjct: 602 KQAMERLLSANHNHMMALLQQLLQNESLSSS------WRDIIVSLVCQVVQTVRPDVKHQ 655

Query: 311 GKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLSS 370
              +D+  ++ +K I  G +  S ++ G V  K+ AHK M +  KNP++LL++  +    
Sbjct: 656 DDDMDIRQFVHIKKIPGGKKFDSVVVNGFVCTKNIAHKKMNSCIKNPKILLLKCSIEYLY 715

Query: 371 SGLSSFKAME----QEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDM 426
              + F  ++    QE++ LK+ +  I    P +VLVEKTVSR  Q+ +LE G+TLV ++
Sbjct: 716 REETKFTCIDPIVLQEREFLKNYVQRIVDVRPTLVLVEKTVSRIAQDMLLEHGITLVINV 775

Query: 427 KLHRLERVARCTGSPILSSGS--LTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMF 484
           K   LER++R T   ++ S    LT   L  C  FY++ F        +     +KTLMF
Sbjct: 776 KSQVLERISRMTQGDLVVSMDQLLTKPHLGTCHKFYMQIF--------QLPNEQTKTLMF 827

Query: 485 IEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTI 540
            EGCP  LGCT+ L+G +  EL R+K ++   + +AYH  LE SFL+D+ AM  T+
Sbjct: 828 FEGCPQHLGCTIKLRGGSDYELARVKEILIFMICVAYHSQLEISFLMDEFAMPPTL 883

The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Catalyzes the phosphorylation of phosphatidylinositol 3-phosphate on the fifth hydroxyl of the myo-inositol ring, to form phosphatidylinositol 3,5-bisphosphate. Required for endocytic-vacuolar pathway and nuclear migration. The product of the reaction it catalyzes functions as an important regulator of vacuole homeostasis perhaps by controlling membrane flux to and/or from the vacuole.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 5EC: 0

>sp\|Q9Y2I7\|FYV1_HUMAN 1-phosphatidylinositol 3-phosphate 5-kinase OS=Homo sapiens GN=PIKFYVE PE=1 SV=3	Back alignment and function description

>sp\|P34756\|FAB1_YEAST 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FAB1 PE=1 SV=3	Back alignment and function description

>sp\|O59722\|FAB1_SCHPO 1-phosphatidylinositol 3-phosphate 5-kinase fab1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fab1 PE=3 SV=2	Back alignment and function description

>sp\|B0G126\|FYV1_DICDI 1-phosphatidylinositol 3-phosphate 5-kinase OS=Dictyostelium discoideum GN=pip5k3 PE=3 SV=1	Back alignment and function description

>sp\|O96838\|FYV1_DROME Putative 1-phosphatidylinositol 3-phosphate 5-kinase OS=Drosophila melanogaster GN=fab1 PE=1 SV=2	Back alignment and function description

>sp\|P61112\|THSA_THEK1 Thermosome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=thsA PE=1 SV=1	Back alignment and function description

>sp\|P61111\|THSA_PYRKO Thermosome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=thsA PE=3 SV=1	Back alignment and function description

>sp\|Q54TH8\|TCPG_DICDI T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1	Back alignment and function description

>sp\|O74341\|TCPG_SCHPO T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cct3 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1582
224146449		1387	predicted protein [Populus trichocarpa]	0.821	0.937	0.637	0.0
255585234		1569	phosphatidylinositol-4-phosphate 5-kinas	0.918	0.926	0.590	0.0
356574577		1594	PREDICTED: uncharacterized protein LOC10	0.937	0.930	0.556	0.0
147788261		1517	hypothetical protein VITISV_042325 [Viti	0.879	0.917	0.594	0.0
359493066		1601	PREDICTED: uncharacterized protein LOC10	0.673	0.665	0.592	0.0
449444198		1517	PREDICTED: uncharacterized protein LOC10	0.882	0.920	0.473	0.0
15218566		1456	protein FAB1D [Arabidopsis thaliana] gi\|	0.843	0.916	0.469	0.0
297846424		1450	phosphatidylinositol-4-phosphate 5-kinas	0.774	0.845	0.483	0.0
356534009		1541	PREDICTED: uncharacterized protein LOC10	0.649	0.667	0.525	0.0
296088688		1310	unnamed protein product [Vitis vinifera]	0.528	0.638	0.571	0.0

>gi\|224146449\|ref\|XP_002326011.1\| predicted protein [Populus trichocarpa] gi\|222862886\|gb\|EEF00393.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1709 bits (4425), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 887/1391 (63%), Positives = 1059/1391 (76%), Gaps = 91/1391 (6%)

Query: 189  NDNEMDMQIWEPPEPEDPEDDIEGSIAYNDDDEDEECGDGTKWGKPSSLSHFRDEGGGRL 248
            +D+E+D Q+WEPPE EDPEDD++GS+A+ DDD+ +ECGDGT+WGKPSSLS+ RDEG    
Sbjct: 5    SDDEVDAQVWEPPEAEDPEDDLDGSVAFIDDDD-DECGDGTEWGKPSSLSYSRDEGSRSF 63

Query: 249  KFKEEKQRAMEKVVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGS 308
            KFKEEKQ+AM++VV+ KFKA+VSQLLK+ GV S  +DGESWVDIVT LSWEAAS L+P +
Sbjct: 64   KFKEEKQKAMDEVVNVKFKAVVSQLLKTAGVASLMRDGESWVDIVTYLSWEAASFLKPEA 123

Query: 309  VDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGL 368
            +D K++D + Y+KVKCIA GSR++S+++KGLVFKK AAHKHMPT+YKNPRLLLI+GVLG 
Sbjct: 124  IDRKAMDPDGYVKVKCIATGSRSESEVVKGLVFKKRAAHKHMPTKYKNPRLLLIQGVLGQ 183

Query: 369  SSSGLSSFKAMEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKL 428
            SSSGLSSFK+MEQ  D L+++++ I+MCHPNVVLVEK+VSRD+QE IL KGMTLV+DMKL
Sbjct: 184  SSSGLSSFKSMEQ--DNLRALIETIEMCHPNVVLVEKSVSRDVQECILAKGMTLVYDMKL 241

Query: 429  HRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGC 488
            HRLER+ARCTGSPIL S +L +QKLK CDSF+I++FVEEH    EGGK+P KTLMFIEGC
Sbjct: 242  HRLERIARCTGSPILLSDALMNQKLKQCDSFHIERFVEEHVVVCEGGKKPRKTLMFIEGC 301

Query: 489  PTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEVAGI 548
            PT LGCT+LLKGS+SDELKR+K VVQ AV+MAYH+ILETSFLVD +AMFS+  F  V   
Sbjct: 302  PTCLGCTILLKGSHSDELKRVKYVVQFAVIMAYHMILETSFLVDWKAMFSSEIFGGVVNT 361

Query: 549  LPMEQQHPALENGNSNVSCFEHSSVESGSSTMDIPISNGFHEDGSY-ANSGPEGESILSY 607
              ++Q   ALE   + + C E S+ E+GSS +DIPISNGFHE+GS+  N G EG      
Sbjct: 362  SSIDQHSSALE---TRIPCVEESTTETGSSIIDIPISNGFHEEGSHNINIGLEG------ 412

Query: 608  EPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYPSLTSYFGFRGREQSGQITEDVPVST 667
              Y PAVFSGFSSLSASL+KV+GD+FPL S++ Y SL+ YFGF G+E +GQI E+VPV  
Sbjct: 413  --YEPAVFSGFSSLSASLKKVMGDSFPLVSSSPYRSLSDYFGFIGQETNGQIMEEVPVLK 470

Query: 668  IMDASLDGPCDTEAKSSSDEEKSL-DGQPTSLPSCPEAPLSMGKDCGNDEDHSQSQEDAN 726
             ++A    P D E K  SDEEKS  DGQP SL     A L  G D GN ED  QS+ DAN
Sbjct: 471  TLEAF--DPSDMEGKKDSDEEKSANDGQPQSLSPYSVATLDSGNDVGNKEDQIQSKGDAN 528

Query: 727  ASLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCS 786
            A LDSQSILVLMS RNALRG ICEQSHFSHIMFY+NFDVPLGKFL+DNLLNQR QC +C 
Sbjct: 529  AVLDSQSILVLMSRRNALRGIICEQSHFSHIMFYRNFDVPLGKFLRDNLLNQRSQCNTCG 588

Query: 787  ELPEAHFYYYARHNKQLTIRVKRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRV 846
            ELPEAHFYYYA HNKQLTI+VKRL     L GE EGKLWMW RCG+CK  + +PKSTKRV
Sbjct: 589  ELPEAHFYYYAHHNKQLTIQVKRLFK--TLPGEGEGKLWMWIRCGKCKHESRLPKSTKRV 646

Query: 847  VISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLYFFGLGPMVGMFKYSPFTTY 906
            +ISTAA  LSFGKFLE+SFSH  SS  L SCGHSL RDFLYFFGLGPM  MFKYSP TTY
Sbjct: 647  LISTAARSLSFGKFLEISFSHQFSSGSLFSCGHSLERDFLYFFGLGPMAAMFKYSPVTTY 706

Query: 907  NMCVPPQKLEFSNSIN-KWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSL 965
            N+ +PPQKLEF +SI    LK+EF  VY+KG+L+F+ V  +LK + SRF GS LNLQGSL
Sbjct: 707  NVSLPPQKLEFYHSIRLDGLKKEFHAVYSKGMLIFNGVGEALKNLRSRFAGSVLNLQGSL 766

Query: 966  KEFSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDRRLH 1025
            KEFS   ++LKQE S FE++IQ  VAK  + DEA++KLLSLN+L WELL+ESCIW+RRLH
Sbjct: 767  KEFSDIEDMLKQESSEFELNIQNAVAK--NGDEAVYKLLSLNQLSWELLLESCIWERRLH 824

Query: 1026 SLLLPDPTVVITGATEKPGPEQTKVKMDGTTAKGNEVPEPEVDSGNGDNVSNNFGNLEVL 1085
            SLLLPD  +++TGA++K   EQ + +M  T     ++   +   G+ D VS+N GNL  +
Sbjct: 825  SLLLPDTLMLVTGASKKELQEQFESQM--TDTADGKIQWNDNTLGSSDEVSDNSGNLRDM 882

Query: 1086 PDVAAEADELVVKEIPIDGPDRESGERDHKKTTVLKDVETSIASDLSSTSLANEDSMVRS 1145
                 EA E  +KEIP+D    E  ++D+  T+      +++A D+            RS
Sbjct: 883  LSTTVEASEFSIKEIPVDDHVHEFKKQDNLYTS------SAVAEDIE-----------RS 925

Query: 1146 NVSDYLSGDDNVQAGKFLMSENLQVDKVVPNSQYLANSGSVVDPNASKNETSTHSLLSDL 1205
             VS                     V++ +P +  + +S S VD ++ K  TS  SL S +
Sbjct: 926  RVS---------------------VERTIPITTSIGSSDSFVDFDSIKKGTSARSLASSI 964

Query: 1206 EKLNGWFWMPFSELQQIYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLG 1265
            E  NGWFWMPF E++QIYMKDLQRGF+PKF+ +S    EH+   +QLI++E  R+HIPLG
Sbjct: 965  ENSNGWFWMPFPEIRQIYMKDLQRGFMPKFQPISSNIQEHMSAAHQLITKECQRLHIPLG 1024

Query: 1266 AENYMVSDYEGELSSIIACALAVLKEMPLSTVVFNEDSGRDGDMAVKTIDSLRSLTRIPT 1325
             +NYMV DY+ ELSSIIACALA LK++                           LTRIPT
Sbjct: 1025 TDNYMVKDYDDELSSIIACALAFLKDI---------------------------LTRIPT 1057

Query: 1326 MASSLWSVNGSSDSDSIYASLSISSEDSRFSSFDGLNLLESLIPPEVLSPEVSIGISKSL 1385
            M S  WS NG SDSDS+++ L+ISS++SR SSFDGLNLLESL+ PE LSPEV+ G SKSL
Sbjct: 1058 MISPHWSSNG-SDSDSVHSMLNISSDESRLSSFDGLNLLESLVRPENLSPEVAFGRSKSL 1116

Query: 1386 GKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSFFVKTLDDRFII 1445
            GKGKYSV CLYA QF DLR+RCCPSEL YI SLSRC+NWDAKGGKSKSFF KTLDDRFII
Sbjct: 1117 GKGKYSVICLYAKQFHDLRNRCCPSELDYIASLSRCKNWDAKGGKSKSFFAKTLDDRFII 1176

Query: 1446 KEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMV 1505
            KEIKKTEF+SF KFA HYFKYMNESF+SGNQTCLAKVLGIYQV +RQ KSGKE++HDLMV
Sbjct: 1177 KEIKKTEFESFVKFAPHYFKYMNESFESGNQTCLAKVLGIYQVILRQTKSGKEIKHDLMV 1236

Query: 1506 MENLTFERNITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQ 1565
            MENLTF RNITRQYDLKGALHARYN+  DGSGDVLLDQNFV+DMNSSPLYVSNTAKR+L+
Sbjct: 1237 MENLTFGRNITRQYDLKGALHARYNSAADGSGDVLLDQNFVDDMNSSPLYVSNTAKRLLE 1296

Query: 1566 RAVWNDTTFLN 1576
            RAVWNDTTFLN
Sbjct: 1297 RAVWNDTTFLN 1307

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|255585234\|ref\|XP_002533319.1\| phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis] gi\|223526863\|gb\|EEF29076.1\| phosphatidylinositol-4-phosphate 5-kinase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356574577\|ref\|XP_003555422.1\| PREDICTED: uncharacterized protein LOC100809696 [Glycine max]	Back alignment and taxonomy information

>gi\|147788261\|emb\|CAN65296.1\| hypothetical protein VITISV_042325 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|359493066\|ref\|XP_002270311.2\| PREDICTED: uncharacterized protein LOC100242669 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449444198\|ref\|XP_004139862.1\| PREDICTED: uncharacterized protein LOC101202759 [Cucumis sativus] gi\|449525806\|ref\|XP_004169907.1\| PREDICTED: uncharacterized LOC101202759 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|15218566\|ref\|NP_174686.1\| protein FAB1D [Arabidopsis thaliana] gi\|5091620\|gb\|AAD39608.1\|AC007454_7 Contains similarity to gi\|836774 FAB1 protein from Saccharomyces cerevisiae genome gb\|D50617 [Arabidopsis thaliana] gi\|332193569\|gb\|AEE31690.1\| protein FAB1D [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297846424\|ref\|XP_002891093.1\| phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis lyrata subsp. lyrata] gi\|297336935\|gb\|EFH67352.1\| phosphatidylinositol-4-phosphate 5-kinase family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|356534009\|ref\|XP_003535550.1\| PREDICTED: uncharacterized protein LOC100815340 [Glycine max]	Back alignment and taxonomy information

>gi\|296088688\|emb\|CBI38138.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1582
TAIR\|locus:2026109		1456	FAB1D "FORMS APLOID AND BINUCL	0.314	0.341	0.430	7.3e-292
TAIR\|locus:2091050		1791	FAB1B "FORMS APLOID AND BINUCL	0.640	0.565	0.324	6.8e-189
TAIR\|locus:2125884		1757	FAB1A "FORMS APLOID AND BINUCL	0.324	0.291	0.332	1.2e-169
TAIR\|locus:2013965		1648	FAB1C "FORMS APLOID AND BINUCL	0.237	0.228	0.356	1e-160
ZFIN\|ZDB-GENE-030131-9636		2100	pikfyve "phosphoinositide kina	0.176	0.132	0.345	1.7e-70
UNIPROTKB\|F1N2K7		2102	PIKFYVE "Uncharacterized prote	0.172	0.129	0.352	2e-68
UNIPROTKB\|F1SST9		2105	PIKFYVE "Uncharacterized prote	0.172	0.129	0.345	8.7e-68
UNIPROTKB\|Q9Y2I7		2098	PIKFYVE "1-phosphatidylinosito	0.172	0.130	0.352	1.1e-67
UNIPROTKB\|F1PXC7		2100	PIKFYVE "Uncharacterized prote	0.172	0.13	0.348	1.8e-67
MGI\|MGI:1335106		2097	Pikfyve "phosphoinositide kina	0.176	0.133	0.339	2e-67

TAIR\|locus:2026109 FAB1D "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1006 (359.2 bits), Expect = 7.3e-292, Sum P(5) = 7.3e-292
 Identities = 234/544 (43%), Positives = 325/544 (59%)

Query:   178 NNASEISQSTDNDNEMD-MQIWXXXXXXXXXXXIEGSIAYNXXXXXXXCGDGTKWGKPSS 236
             N+   +   +D +++ D + +W           ++G  A +       C DG+KW K S 
Sbjct:    75 NSVENVQFLSDREDDSDDVPVWEPPEPENPEDEVDGVFADDDDD----CCDGSKWNKASL 130

Query:   237 LSHFRDEGGGRLKFKEEKQRAMEKVVSGKFKAIVSQLLKSVGVVSSGKDGESWVDIVTSL 296
             L    DE   + K  EE +R M +    KFK IVSQL+KS G   S ++   W +IV  L
Sbjct:   131 LGELSDESSEKRKVYEENRRVMLEEADSKFKFIVSQLIKSAGF--SIEESGYWFEIVARL 188

Query:   297 SWEAASSLRPGSVDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFKKHAAHKHMPTEYKN 356
              WEAAS L+P ++DGKS+D   YIKVKCIA GS   S++ KGLVFKKHAA KHM T+Y++
Sbjct:   189 CWEAASMLKP-AIDGKSVDPTEYIKVKCIATGSCVDSEVFKGLVFKKHAALKHMATKYEH 247

Query:   357 PRXXXXXXXXXXXXXXXXXFKAMEQEKDQL----KSVMDMIDMCHPNVVLVEKTVSRDIQ 412
             PR                  +++ Q+ + L    K V+D+I+   P+V+LVEK+VSRDIQ
Sbjct:   248 PRIMLVEGVLGHPISGFSSLQSVNQDNEYLLKYVKPVVDIIEASKPDVMLVEKSVSRDIQ 307

Query:   413 ESILEKGMTLVFDMKLHRLERVARCTGSPILSSGSLTSQKLKHCDSFYIKKFVEEHAGFR 472
             ++IL+KG+TLVFDMKLHRL+R++RC GSPILS  SL+SQKLKHCDSF I+K VEEH    
Sbjct:   308 KTILDKGVTLVFDMKLHRLQRISRCIGSPILSVDSLSSQKLKHCDSFRIEKIVEEHNAAG 367

Query:   473 EGGKRPSKTLMFIEGCPTRLGCTVLLKGSNSDELKRIKSVVQCAVVMAYHLILETSFLVD 532
             E  K+P+KTLMF+EGCPTRLGCT+LLKG +S+ LK++K VVQ + ++AYHL+LE SFL D
Sbjct:   368 ESDKKPTKTLMFLEGCPTRLGCTILLKGCHSERLKKVKEVVQYSFILAYHLMLEASFLAD 427

Query:   533 QRAMFSTIPFAEVAGILPMEQQHPALENGNSNVSCFEHSSVESGSSTMDIPISNGFHEDG 592
             +  MFSTI FA+ A    +E     +EN + + S       ES S  +DIP+SNGF E  
Sbjct:   428 RHTMFSTI-FAKEATSCVVE-----IENFSPSPS-----PRESPSEAVDIPVSNGFDEQT 476

Query:   593 SYANSGPEGESI----------LSYEPYNPAVFSGFSSLSASLRKVIG-----DNFPLSS 637
                N   +GE +           S+EPYNP +F+GFSSLSA L K +G     ++ P+S 
Sbjct:   477 IQINGEADGEKVGTWESDGDHVFSHEPYNPVIFTGFSSLSARLSKYLGFVQNPESVPVSV 536

Query:   638 AAAYPSLTSYFGFR-GREQSGQITEDV------PVSTIMDASLDGPCDTEAKSSSDEEKS 690
                  + ++    R   E + +  ED       P   +  +S DG  D ++++ +D E +
Sbjct:   537 DTDVSTTSNLDSIRESEEDTAEKNEDKQPLLLDPELPVNSSSDDG--DNKSQTENDIEST 594

Query:   691 LDGQ 694
             L+ Q
Sbjct:   595 LESQ 598

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016307 "phosphatidylinositol phosphate kinase activity" evidence=IEA

GO:0016308 "1-phosphatidylinositol-4-phosphate 5-kinase activity" evidence=ISS

GO:0044267 "cellular protein metabolic process" evidence=IEA

GO:0046488 "phosphatidylinositol metabolic process" evidence=IEA

TAIR\|locus:2091050 FAB1B "FORMS APLOID AND BINUCLEATE CELLS 1B" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2125884 FAB1A "FORMS APLOID AND BINUCLEATE CELLS 1A" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2013965 FAB1C "FORMS APLOID AND BINUCLEATE CELLS 1C" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-9636 pikfyve "phosphoinositide kinase, FYVE finger containing" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

UNIPROTKB\|F1N2K7 PIKFYVE "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1SST9 PIKFYVE "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9Y2I7 PIKFYVE "1-phosphatidylinositol 3-phosphate 5-kinase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|F1PXC7 PIKFYVE "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

MGI\|MGI:1335106 Pikfyve "phosphoinositide kinase, FYVE finger containing" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1582
cd03334		261	cd03334, Fab1_TCP, TCP-1 like domain of the eukary	1e-103
cd00139		313	cd00139, PIPKc, Phosphatidylinositol phosphate kin	8e-53
smart00330		342	smart00330, PIPKc, Phosphatidylinositol phosphate	6e-46
cd03333		209	cd03333, chaperonin_like, chaperonin_like superfam	2e-44
pfam01504		255	pfam01504, PIP5K, Phosphatidylinositol-4-phosphate	2e-40
COG5253		612	COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-	1e-30
pfam00118		481	pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin fami	2e-22
cd00309		464	cd00309, chaperonin_type_I_II, chaperonin families	3e-19
TIGR02344		525	TIGR02344, chap_CCT_gamma, T-complex protein 1, ga	4e-18
TIGR02339		519	TIGR02339, thermosome_arch, thermosome, various su	3e-15
cd03343		517	cd03343, cpn60, cpn60 chaperonin family	1e-13
cd03337		480	cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type	1e-09
PLN03185		765	PLN03185, PLN03185, phosphatidylinositol phosphate	2e-07
TIGR02345		523	TIGR02345, chap_CCT_eta, T-complex protein 1, eta	4e-07
cd03340		522	cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type I	8e-07
cd03338		515	cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type	3e-06
cd03335		527	cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type	3e-06
cd03342		484	cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type	3e-06
TIGR02342		517	TIGR02342, chap_CCT_delta, T-complex protein 1, de	3e-06
COG0459		524	COG0459, GroL, Chaperonin GroEL (HSP60 family) [Po	4e-06
TIGR02340		536	TIGR02340, chap_CCT_alpha, T-complex protein 1, al	5e-05
cd03339		526	cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic ty	3e-04
TIGR02343		532	TIGR02343, chap_CCT_epsi, T-complex protein 1, eps	4e-04

>gnl\|CDD\|239450 cd03334, Fab1_TCP, TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1	Back alignment and domain information

 Score =  329 bits (847), Expect = e-103
 Identities = 124/273 (45%), Positives = 180/273 (65%), Gaps = 17/273 (6%)

Query: 267 KAIVSQLLKSVGVVSSGKDGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIA 326
           +A+++QLLK         + ESW+DI+  L W+AAS+++P    G  +D+  Y+K+K I 
Sbjct: 1   RALLAQLLKD----EGISNDESWLDILLPLVWKAASNVKPDVRAGDDMDIRQYVKIKKIP 56

Query: 327 AGSRNQSQIIKGLVFKKHAAHKHMPTEYKNPRLLLIRGVLGLS--SSGLSSFKAM-EQEK 383
            GS + S+++ G+VF K+ AHK MP++ KNPR+LL++G L      + L S   +  QEK
Sbjct: 57  GGSPSDSEVVDGVVFTKNVAHKRMPSKIKNPRILLLQGPLEYQRVENKLLSLDPVILQEK 116

Query: 384 DQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKGMTLVFDMKLHRLERVARCTGSPIL 443
           + LK+++  I    P+V+LVEK+VSR  Q+ +LE G+TLV ++K   LER++RCTG+ I+
Sbjct: 117 EYLKNLVSRIVALRPDVILVEKSVSRIAQDLLLEAGITLVLNVKPSVLERISRCTGADII 176

Query: 444 SSG--SLTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLLKGS 501
           SS    LTS KL  C+SF ++ +VEEH          SKTLMF EGCP  LGCT+LL+G 
Sbjct: 177 SSMDDLLTSPKLGTCESFRVRTYVEEH--------GRSKTLMFFEGCPKELGCTILLRGG 228

Query: 502 NSDELKRIKSVVQCAVVMAYHLILETSFLVDQR 534
           + +ELK++K VV+  V  AYHL LETSFL D+ 
Sbjct: 229 DLEELKKVKRVVEFMVFAAYHLKLETSFLADEF 261

Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins. Length = 261

>gnl\|CDD\|238081 cd00139, PIPKc, Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>gnl\|CDD\|214623 smart00330, PIPKc, Phosphatidylinositol phosphate kinases	Back alignment and domain information

>gnl\|CDD\|239449 cd03333, chaperonin_like, chaperonin_like superfamily	Back alignment and domain information

>gnl\|CDD\|216538 pfam01504, PIP5K, Phosphatidylinositol-4-phosphate 5-Kinase	Back alignment and domain information

>gnl\|CDD\|227578 COG5253, MSS4, Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>gnl\|CDD\|215730 pfam00118, Cpn60_TCP1, TCP-1/cpn60 chaperonin family	Back alignment and domain information

>gnl\|CDD\|238189 cd00309, chaperonin_type_I_II, chaperonin families, type I and type II	Back alignment and domain information

>gnl\|CDD\|233825 TIGR02344, chap_CCT_gamma, T-complex protein 1, gamma subunit	Back alignment and domain information

>gnl\|CDD\|233823 TIGR02339, thermosome_arch, thermosome, various subunits, archaeal	Back alignment and domain information

>gnl\|CDD\|239459 cd03343, cpn60, cpn60 chaperonin family	Back alignment and domain information

>gnl\|CDD\|239453 cd03337, TCP1_gamma, TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit	Back alignment and domain information

>gnl\|CDD\|215619 PLN03185, PLN03185, phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

>gnl\|CDD\|200176 TIGR02345, chap_CCT_eta, T-complex protein 1, eta subunit	Back alignment and domain information

>gnl\|CDD\|239456 cd03340, TCP1_eta, TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit	Back alignment and domain information

>gnl\|CDD\|239454 cd03338, TCP1_delta, TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit	Back alignment and domain information

>gnl\|CDD\|239451 cd03335, TCP1_alpha, TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit	Back alignment and domain information

>gnl\|CDD\|239458 cd03342, TCP1_zeta, TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit	Back alignment and domain information

>gnl\|CDD\|233824 TIGR02342, chap_CCT_delta, T-complex protein 1, delta subunit	Back alignment and domain information

>gnl\|CDD\|223535 COG0459, GroL, Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>gnl\|CDD\|131393 TIGR02340, chap_CCT_alpha, T-complex protein 1, alpha subunit	Back alignment and domain information

>gnl\|CDD\|239455 cd03339, TCP1_epsilon, TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit	Back alignment and domain information

>gnl\|CDD\|131396 TIGR02343, chap_CCT_epsi, T-complex protein 1, epsilon subunit	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1582
KOG0230		1598	consensus Phosphatidylinositol-4-phosphate 5-kinas	100.0
cd03334		261	Fab1_TCP TCP-1 like domain of the eukaryotic phosp	100.0
COG5253		612	MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Si	100.0
cd00139		313	PIPKc Phosphatidylinositol phosphate kinases (PIPK	100.0
smart00330		342	PIPKc Phosphatidylinositol phosphate kinases.	100.0
KOG0229		420	consensus Phosphatidylinositol-4-phosphate 5-kinas	100.0
TIGR02344		525	chap_CCT_gamma T-complex protein 1, gamma subunit.	100.0
TIGR02339		519	thermosome_arch thermosome, various subunits, arch	100.0
PLN03185		765	phosphatidylinositol phosphate kinase; Provisional	100.0
KOG0364		527	consensus Chaperonin complex component, TCP-1 gamm	100.0
cd03343		517	cpn60 cpn60 chaperonin family. Chaperonins are inv	100.0
cd03339		526	TCP1_epsilon TCP-1 (CTT or eukaryotic type II) cha	100.0
cd03335		527	TCP1_alpha TCP-1 (CTT or eukaryotic type II) chape	100.0
cd03340		522	TCP1_eta TCP-1 (CTT or eukaryotic type II) chapero	100.0
PTZ00212		533	T-complex protein 1 subunit beta; Provisional	100.0
TIGR02343		532	chap_CCT_epsi T-complex protein 1, epsilon subunit	100.0
cd03338		515	TCP1_delta TCP-1 (CTT or eukaryotic type II) chape	100.0
cd03333		209	chaperonin_like chaperonin_like superfamily. Chape	100.0
cd03336		517	TCP1_beta TCP-1 (CTT or eukaryotic type II) chaper	100.0
TIGR02342		517	chap_CCT_delta T-complex protein 1, delta subunit.	100.0
TIGR02347		531	chap_CCT_zeta T-complex protein 1, zeta subunit. M	100.0
TIGR02340		536	chap_CCT_alpha T-complex protein 1, alpha subunit.	100.0
cd03337		480	TCP1_gamma TCP-1 (CTT or eukaryotic type II) chape	100.0
TIGR02345		522	chap_CCT_eta T-complex protein 1, eta subunit. Mem	100.0
KOG0361		543	consensus Chaperonin complex component, TCP-1 eta	100.0
TIGR02341		519	chap_CCT_beta T-complex protein 1, beta subunit. M	100.0
PF01504		252	PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase;	100.0
cd03342		484	TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaper	100.0
cd00309		464	chaperonin_type_I_II chaperonin families, type I a	100.0
TIGR02346		531	chap_CCT_theta T-complex protein 1, theta subunit.	99.98
PF00118		485	Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperon	99.98
KOG0358		534	consensus Chaperonin complex component, TCP-1 delt	99.97
cd03341		472	TCP1_theta TCP-1 (CTT or eukaryotic type II) chape	99.97
KOG0360		545	consensus Chaperonin complex component, TCP-1 alph	99.96
KOG0363		527	consensus Chaperonin complex component, TCP-1 beta	99.96
KOG0359		520	consensus Chaperonin complex component, TCP-1 zeta	99.96
COG0459		524	GroL Chaperonin GroEL (HSP60 family) [Posttranslat	99.95
KOG0362		537	consensus Chaperonin complex component, TCP-1 thet	99.92
cd03344		520	GroEL GroEL_like type I chaperonin. Chaperonins ar	99.91
PRK00013		542	groEL chaperonin GroEL; Reviewed	99.91
PRK12849		542	groEL chaperonin GroEL; Reviewed	99.91
PTZ00114		555	Heat shock protein 60; Provisional	99.9
TIGR02348		524	GroEL chaperonin GroL. This family consists of Gro	99.9
PRK12851		541	groEL chaperonin GroEL; Reviewed	99.9
PRK12850		544	groEL chaperonin GroEL; Reviewed	99.89
PRK12852		545	groEL chaperonin GroEL; Reviewed	99.88
CHL00093		529	groEL chaperonin GroEL	99.86
PRK14104		546	chaperonin GroEL; Provisional	99.86
PLN03167		600	Chaperonin-60 beta subunit; Provisional	99.85
KOG0357		400	consensus Chaperonin complex component, TCP-1 epsi	99.77
KOG0230		1598	consensus Phosphatidylinositol-4-phosphate 5-kinas	95.77
KOG0356		550	consensus Mitochondrial chaperonin, Cpn60/Hsp60p [	93.42

>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]	Back alignment and domain information

Probab=100.00  E-value=4.8e-206  Score=1916.50  Aligned_cols=1252  Identities=39%  Similarity=0.618  Sum_probs=894.0

Q ss_pred             CCCccCCC--cccCCCCCCCCcccccccccCCCCCcccCCCCCCcCC---cCCCCCCcccCCCcccchHHHHHHHHHHHH
Q 000391          189 NDNEMDMQ--IWEPPEPEDPEDDIEGSIAYNDDDEDEECGDGTKWGK---PSSLSHFRDEGGGRLKFKEEKQRAMEKVVS  263 (1582)
Q Consensus       189 ~~~d~~~~--~w~pp~p~~~~d~~~~~~~~~ddd~~~~~~~~~~~~~---~ss~~~~~~~~~~~~~~~~~~~~~l~~~~~  263 (1582)
                      +++||+++  +|.||+||+|+||+|+.++|+||+++|   .++.|++   +.+|+.+.....+  +..+++++.|+.+..
T Consensus       232 ~~~d~~~~~~~~~p~~pene~dd~~~~~~~~~~~~~D---~~~~~~~~~~s~s~s~~~~~~~~--~~~ee~~~~m~~~~~  306 (1598)
T KOG0230|consen  232 EILDFENNGLLWEPPEPENEEDDAESVLADDDDDEGD---TSGKWNPLRLSNSFSAPEYKSKD--KSAEEDEKVMRNVVE  306 (1598)
T ss_pred             cccchhhccCCCCCCCCCcccccchhccccccccccc---cccccccccccCccCCCCccccc--cchhhcchhhhcccc
Confidence            78999999  999999999999999988675554433   2367876   6788887554555  788999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCC-CcchHHHHHHHHHHHHHHhcCCCCCCCCccCcccCeEEEEccCCCCCCceEEEeEEEe
Q 000391          264 GKFKAIVSQLLKSVGVVSSGK-DGESWVDIVTSLSWEAASSLRPGSVDGKSLDLNSYIKVKCIAAGSRNQSQIIKGLVFK  342 (1582)
Q Consensus       264 ~h~~~l~~qLL~~~~~sl~sK-~~~~w~~~ls~L~~~Av~~V~pd~~~g~~mDi~~yVKIkkI~GGs~~DS~vI~GVV~~  342 (1582)
                      .||++++.||++.+.+++.++ ...+|.++++.|+|+|+..++|+...++.|||.+|||||||+||++.||++|+||||+
T Consensus       307 ~~fr~~~a~Llr~~~ls~~~d~~~~~W~~ii~~L~~eaa~~~kp~~~~~~~md~~~YVkvK~I~~g~~~dS~vi~Gvv~s  386 (1598)
T KOG0230|consen  307 SHFRALVAQLLRSENLSVVMDGAHQEWLDIITSLCWEAANLLKPDTDSGGLMDPGNYVKVKCVAGGSRVDSEVIKGVVCS  386 (1598)
T ss_pred             chHHHHHHHHhcccCcCccccchhhhHHHHHHHHHHHHHHhcCcCcccCCCcCcccceEEEEecCCCcccceeeeEEEee
Confidence            999999999999999885443 4458999999999999999999998899999999999999999999999999999999


Q ss_pred             eccCCCCCCccccCCcEEEEEecCCccccc--cchhhh-HHHHHHHHHHHHhhhhccCCeEEEecccccHHHHHHHHHcC
Q 000391          343 KHAAHKHMPTEYKNPRLLLIRGVLGLSSSG--LSSFKA-MEQEKDQLKSVMDMIDMCHPNVVLVEKTVSRDIQESILEKG  419 (1582)
Q Consensus       343 Knvahk~Mp~~i~nPRILLL~~~LEy~r~e--lsSle~-i~qE~eyL~~~V~rI~~~~pnVVLveksVs~~Al~~L~~~g  419 (1582)
                      |+++||+|++++++|||+|+.|+|||+|..  |+|+++ ++||++||+.+|+||...+||||||+|+|+++||+||..+|
T Consensus       387 Kn~~~k~M~~~~e~prilll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~vllVeksVS~~aqe~L~~k~  466 (1598)
T KOG0230|consen  387 KNVAHKRMATKYENPRILLLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPDVLLVEKSVSRIAQELLLDKG  466 (1598)
T ss_pred             cchhhhhhhhhccCCceEEEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCCeEEEechHHHHHHHHhhccC
Confidence            999999999999999999999999999976  999999 99999999999999999999999999999999999999999


Q ss_pred             CeEeccCCHHHHHHHHHHhCCceecccC-CCCCCccccceEEEEEeecccccccCCCCCCCceEEEEEcCCCCceEEEEE
Q 000391          420 MTLVFDMKLHRLERVARCTGSPILSSGS-LTSQKLKHCDSFYIKKFVEEHAGFREGGKRPSKTLMFIEGCPTRLGCTVLL  498 (1582)
Q Consensus       420 I~vv~nVK~~~LeRIAR~TGA~IisSid-L~~~~LG~C~~f~v~~~~~~~~~~~~g~~~~~Ktl~ffeGc~~~~gcTILL  498 (1582)
                      |+++.|||+..|+||||||||+|++++| ++.++||+|+.|+++++.++|        +..||+|||+||++++||||||
T Consensus       467 I~lvlnvK~s~leRIsR~tga~I~~siDslt~~klg~C~~F~v~~~~e~h--------k~sKTlmffegc~~~lG~TiLL  538 (1598)
T KOG0230|consen  467 ISLVLNVKRSLLERISRCTGADIVPSVDSLTSQKLGYCELFRVENYVEEH--------KPSKTLMFFEGCPKPLGCTILL  538 (1598)
T ss_pred             eEEEEeccHHHHHHHHHHhcCceecchhhhhccccCCCccHhhhhhhhcc--------cchhhhHHhhcCCCCCCceEEe
Confidence            9999999999999999999999999999 999999999999999999876        5689999999999999999999


Q ss_pred             eCCCHHHHHHHHHHHHHHHHHHHHHhhcCeeecCCCcccccCCcccc-ccCCCccccccccccCCCCCcccccCcccCCC
Q 000391          499 KGSNSDELKRIKSVVQCAVVMAYHLILETSFLVDQRAMFSTIPFAEV-AGILPMEQQHPALENGNSNVSCFEHSSVESGS  577 (1582)
Q Consensus       499 RG~s~~~L~evKrvl~dav~v~~~l~lE~s~l~ggGa~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  577 (1582)
                      ||+..++|++||+|++++++++||+.||++||+|.||++........ +..+++...      ..+.++.....      
T Consensus       539 rG~~~~eLkkVK~Vvq~~v~aay~l~LE~SflaDe~asi~~~~~~~~~~~~~~~~~~------~~s~~~~~t~s------  606 (1598)
T KOG0230|consen  539 RGDSLEELKKVKHVVQYLVFAAYHLALETSFLADEGASISSPKLSIPTSVETSIINR------SISTSPGETDS------  606 (1598)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCccccccccccceeccccccc------ccccCCCCCcc------
Confidence            99999999999999999999999999999999999999886433221 111110000      00111100000      


Q ss_pred             CCccCCCCCCCcCCCCccCCCCCCCccccccCCCCccccCccccccccccccccCCCCcccccCC-----Cccccccccc
Q 000391          578 STMDIPISNGFHEDGSYANSGPEGESILSYEPYNPAVFSGFSSLSASLRKVIGDNFPLSSAAAYP-----SLTSYFGFRG  652 (1582)
Q Consensus       578 ~~~~~~~~n~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~P~~~~~~~~-----~l~~~~~~~~  652 (1582)
                      .....+......+... .+ .....+.++..|.                  +....|+....+++     .+..+.+.-.
T Consensus       607 t~~~a~~~~~~~e~~~-~~-~~~~~~~ls~sp~------------------~~~~~~~~~i~P~~~~~e~~~~~~~~~~~  666 (1598)
T KOG0230|consen  607 TAEKAPVEALQVEPNR-FN-GALSSELLSSSPF------------------LEFPLDLLEIAPGELVIETRLSSYSKGPK  666 (1598)
T ss_pred             hhcccchhhhccchhh-hh-cccccceeecccc------------------cccCCCccccCCccceeecchhhhcCchh
Confidence            0000010000000000 00 0000111211111                  00001100000000     0000000000


Q ss_pred             ccccCccccCCCccccccccCCCCCCccCCCCccccc---ccCCCCCCCCCCCCCCCCC--CCCCCCCCcccCCccccCC
Q 000391          653 REQSGQITEDVPVSTIMDASLDGPCDTEAKSSSDEEK---SLDGQPTSLPSCPEAPLSM--GKDCGNDEDHSQSQEDANA  727 (1582)
Q Consensus       653 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~q~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  727 (1582)
                      ..+-....+... ..++..   ..+-...+.+.....   ....+.      +..+...  .++..-.+-+.+..++.++
T Consensus       667 ~~~lv~~~es~~-~~~~~s---~~~~~~~l~e~~~~~~~~~~~k~~------~~~~~~~~~~~~~~~~~~e~~~s~~~~~  736 (1598)
T KOG0230|consen  667 QNGLVPAHESVL-NDLHES---TLSILSKLPETRSGTHEGNEDKGP------GLEPELANNQNIQRPEETEEQSSKDALD  736 (1598)
T ss_pred             hccccccccccc-cccccc---cccccccccchhcccchhccccCc------cccccccccccccchhhhhhhhcccCCC
Confidence            000000000000 000100   000000000000000   000000      0000000  0000000111125678899


Q ss_pred             CCCCCeEEEEEeeccCCCCCccCCCcEEEEeccCCCCccHHHHHHHHhhccCCCCCCCCCChhcceeeeeecCcEEEEEE
Q 000391          728 SLDSQSILVLMSSRNALRGTICEQSHFSHIMFYKNFDVPLGKFLQDNLLNQRKQCASCSELPEAHFYYYARHNKQLTIRV  807 (1582)
Q Consensus       728 p~~HQsI~VL~Ss~c~~~~~~C~~P~lv~I~fY~~~D~tLGqFLe~~~~~~~~~C~sC~~pm~~H~r~YvH~~g~ltI~V  807 (1582)
                      |.+||+|+||||++|.+++.+|++|||++|+|||.+|+||||||+++||++.|.|++|.+||++|+|||||++|++||.|
T Consensus       737 ~~~HQsilVl~ss~~~~k~~~C~r~~l~~ikyy~~~D~~lg~fL~~~~f~~~~~C~sC~~~~laHv~~yvh~~g~l~I~v  816 (1598)
T KOG0230|consen  737 PSSHQSILVLFSSRSVLKGSVCERPHLLRIKYYGSFDKPLGRFLRDYLFDQRYMCPSCNEPMLAHVRCYVHGNGSLTISV  816 (1598)
T ss_pred             ccccceeEEEEeeeeeccCCccccccEEEEEeeccccchHhHHHHHHHhcccccCccccchHHHHHHHHhhccCceEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EecCccccCCCCCCCcEEEeecCCCCCCCCCCCCCCceEEcccccccccHHHHHHHhcCCCCCCCCCCCCCCCcccccee
Q 000391          808 KRLPDRIRLSGEAEGKLWMWSRCGRCKTANGVPKSTKRVVISTAACGLSFGKFLELSFSHHSSSTRLSSCGHSLHRDFLY  887 (1582)
Q Consensus       808 e~l~~~~~lpge~~~~I~MWs~Ck~C~~~~g~~~sTp~v~MSd~tW~~SFGKfLELsF~~~~~~~r~~~C~Hsl~rDhlr  887 (1582)
                      ++++..  +||+.+|+|||||||++|++.   ||+|++|+||++||++||||||||+||+|+++.|++.|||+|||||||
T Consensus       817 ~~~~e~--l~~e~~~kI~~w~~ClkC~~~---~~sT~rv~~Sdaaw~lSfgKfLEl~fs~~a~~~R~~~C~Hsl~rD~L~  891 (1598)
T KOG0230|consen  817 KKLPEL--LPGEQKGKIWMWSRCLKCNRF---PPSTRRVVMSDAAWGLSFGKFLELSFSNHATANRVASCGHSLHRDCLR  891 (1598)
T ss_pred             eccccc--cccccCceEEEEeccccCCCC---CCCcceeEcchhhHhhhHHHHHHhhhccccccccccCCcchhhhhhhh
Confidence            999987  899999999999999999985   899999999999999999999999999999999999999999999999


Q ss_pred             ecccCCeEEEEEeceeeeeEEecCCCeeEEccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccchhhh
Q 000391          888 FFGLGPMVGMFKYSPFTTYNMCVPPQKLEFSNSINKWLKEEFQNVYTKGILLFSEVESSLKQIGSRFVGSTLNLQGSLKE  967 (1582)
Q Consensus       888 yFg~~~~Va~F~YspI~v~ev~lPp~~l~~~~~~~~~l~~E~~~v~~k~~~~f~sV~~rL~~ik~~~~~~~~~~~~~~~~  967 (1582)
                      |||||+|||+|+|++|++|+|++||.+|+|++..++|+++|+++|+.||+.+|++|.++|.+|+.+-+.        +..
T Consensus       892 ffgf~~mva~f~ys~i~v~~v~lpp~~l~~~~~~~~~~~~e~k~v~~k~~~~~n~v~~~l~~i~~~~~~--------~~~  963 (1598)
T KOG0230|consen  892 FFGFGNMVACFRYSPIEVYEVDLPPSKLEFNHIQQEWLQEEIKEVIEKGEELYNEVLERLSRIAEKDEN--------RPL  963 (1598)
T ss_pred             hcccCCceeeeeeccceeEEEeCChhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--------cch
Confidence            999999999999999999999999999999944449999999999999999999999999999986211        357


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhccCcchhhhHHHHHHHHHHHHHHHhhHhHHhhhccCCCCcc-cccCCCCCCCCC
Q 000391          968 FSVTSEILKQERSVFEVDIQKTVAKKVHSDEALHKLLSLNRLRWELLIESCIWDRRLHSLLLPDPTV-VITGATEKPGPE 1046 (1582)
Q Consensus       968 i~eL~~ll~~ek~~~~~~l~~~~~~~~~~~~~~~~il~LN~l~r~L~~~~~~WD~rL~~l~~~~~~~-~~~~~~~~~~~e 1046 (1582)
                      +.+|+.+|.+|+.+|.+.|+.++.+.....+..++++.||++||.|.+.++.||.||+.+....+.. ..+.+.++.  +
T Consensus       964 i~~l~~~l~~e~~~f~~~l~~~~~~~~~~~~~s~d~l~l~~~rr~l~~~s~~w~~~l~s~~~~~k~~~~~~~~~~~~--~ 1041 (1598)
T KOG0230|consen  964 IQELKELLKHEKKEFKQNLQPIFTLEVDDGQLSHDILALNRDRRALLASSYLWDERLISLSKSLKLESSKDTKPKES--E 1041 (1598)
T ss_pred             hhhhhhhhhhhHHHHHHhhhhhhhhccccCcchhhHHHHHHHHHHHHhhhccccccchhhhhhhccccccccccccc--c
Confidence            8999999999999999999999998887888999999999999999999999999999876443310 000001111  1


Q ss_pred             cccccccCCCCCCCCCCCCCcCCCCCCCCCCCCCCCccCcccccchhhhhhcccCCCCCCCCcCccc-cccccccccccc
Q 000391         1047 QTKVKMDGTTAKGNEVPEPEVDSGNGDNVSNNFGNLEVLPDVAAEADELVVKEIPIDGPDRESGERD-HKKTTVLKDVET 1125 (1582)
Q Consensus      1047 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~ 1125 (1582)
                      +.     .+ ......+++......++....++......+....+.......+.     ....+... .....  .+.+.
T Consensus      1042 ~~-----~~-~~~~r~p~~~k~~~~~~~~~~~~s~~~~~~~~~lp~~~~s~~~d-----~~~~~~~~~~~~~~--s~~~~ 1108 (1598)
T KOG0230|consen 1042 TN-----ST-AKRKRSPEPQKGVDEDSFLTDSSSDVSSLEHLNLPLPEDSNSTD-----TGLSGPSEVLEDNE--SIDEM 1108 (1598)
T ss_pred             cc-----Cc-cccccCchhhccccccccccccccccCccccccCCCCCcccccc-----hhccCccccccccc--chhhc
Confidence            10     00 00000111100000000000000000000000000000000000     00000000 00000  00000


Q ss_pred             c------cc-cCCCCCcccccccccccCCCCCCCCCCCccccccccccccccccccCCCcccCCCCCccCCCCCCCCccc
Q 000391         1126 S------IA-SDLSSTSLANEDSMVRSNVSDYLSGDDNVQAGKFLMSENLQVDKVVPNSQYLANSGSVVDPNASKNETST 1198 (1582)
Q Consensus      1126 ~------~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~~~s~~~~~~~~~~~~~ 1198 (1582)
                      .      .+ .....+++.+.++.+|.                        ..++.|+.......+...+......+   
T Consensus      1109 ~~~v~n~~s~~~~~~~~~~~~l~~~~~------------------------g~r~~~~~~P~s~~~~~~~~~~~~~~--- 1161 (1598)
T KOG0230|consen 1109 LGSVRNTYSLANKVRKILKQILDSATI------------------------GNRANPKSSPFSGQDHSTDLPLESNP--- 1161 (1598)
T ss_pred             ccccccccchhhHHHHHHHHhcccccc------------------------cccccCCCCCCchhhhccccccccCC---
Confidence            0      00 00000001111111111                        01111100000000000000000000   


Q ss_pred             ccccchh-hhccccccCchhHHHH-HHHHhhhcCCCCcccccccCCCCCCcchhhhhccccccccccCCCCCcceEeccC
Q 000391         1199 HSLLSDL-EKLNGWFWMPFSELQQ-IYMKDLQRGFVPKFECVSRYTPEHLPTVYQLISEEGTRMHIPLGAENYMVSDYEG 1276 (1582)
Q Consensus      1199 ~~~~~~~-~~~~~~~~~p~~~~~~-~~~~~~~~~~l~k~~~v~~~~p~~~~~~~~~~~~~~~~l~~p~~~~~~vv~V~ed 1276 (1582)
                         +... .+...|++.||..+.. .+.++++... ++.......-|.+.+.-.....+.++|+.+|++.++.+|+||||
T Consensus      1162 ---~~~~e~~~~~~~e~~~~~~~~~~~~~e~~lns-~~~~~~~~~~~k~~~s~~~s~~~~~~rLl~p~~~ndl~vp~~ed 1237 (1598)
T KOG0230|consen 1162 ---IHVLEKELSSWIEDPLTNMYYREATKELSLNS-QKNSAETKEPPKYPSSESESEPESSSRLLLPLGLNDLVVPVYED 1237 (1598)
T ss_pred             ---ccccccccHHHHhhhhhhHhHHHHHHHHHhhc-chhhcccccCCcCcccccccccccccceeccccCCcccCCcccC
Confidence               0111 1455799999988775 5545443322 22222223344454443333457788999999999999999999


Q ss_pred             CcchhhhhhhcccCccccccccccCCCCCCCCcccccccccccccc-Ccccc-ccccccCCCCCCcccccccccCCCccc
Q 000391         1277 ELSSIIACALAVLKEMPLSTVVFNEDSGRDGDMAVKTIDSLRSLTR-IPTMA-SSLWSVNGSSDSDSIYASLSISSEDSR 1354 (1582)
Q Consensus      1277 EpSSiIA~aLss~eY~~~l~~~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~-ss~~s~~~~~~s~~~~~~~sf~~~~~~ 1354 (1582)
                      ||+|+|||||++.+|..+...    .       .....-..+.+.. ..... ...|... +.+...    +..      
T Consensus      1238 pp~s~ia~al~s~~~~~q~~~----p-------~~sis~~~S~~~~~~s~~~e~~~~~~~-sl~~s~----l~~------ 1295 (1598)
T KOG0230|consen 1238 PPPSLIAYALSSKERINQESS----P-------GLSISFSLSNLQGRLSKISEFDDTKSE-SLDNSG----LES------ 1295 (1598)
T ss_pred             CCchhhhhhhcchhhccCCCC----C-------Cccccccccccccchhhhhhhhhhhhc-cccccc----cch------
Confidence            999999999999888765431    0       0000000000000 00000 0000000 000000    000      


Q ss_pred             ccccccccccccCCCCCCCCCceeeeeecccCCCcEEEEEcCHHHHHHHHHHcCCChHHHHHHhccccccccCCCCccce
Q 000391         1355 FSSFDGLNLLESLIPPEVLSPEVSIGISKSLGKGKYSVKCLYANQFRDLRSRCCPSELAYIDSLSRCRNWDAKGGKSKSF 1434 (1582)
Q Consensus      1355 ~~~~d~~~~~~s~~~~e~~~~~v~~~~~f~~~~~~~~~k~y~p~~F~~LR~~~gi~~~~yi~SLs~~~~~~~sgGKSGs~ 1434 (1582)
                       +.+   ..++.++++. ++..+++.++|++|+.+|+|++|||++|++||+.||.++++||+||+||.+|.++|||||++
T Consensus      1296 -s~~---~~~e~l~~~~-~~~~~h~~~~f~egk~k~svk~~yAe~F~~LR~~c~~sEe~fIrSLsRc~~W~aqGGKSgs~ 1370 (1598)
T KOG0230|consen 1296 -SSY---RRGENLQKSK-LETRTHLEYQFSEGKAKYSVKCYYAEQFRALRKICCPSEEDFIRSLSRCVKWEAQGGKSGSF 1370 (1598)
T ss_pred             -hhh---cchhhccccc-cccccceeeeccCCceEEEEEEEehhhHHHHHHhhCchHHHHHHHHhcCcccccCCCcccce
Confidence             011   1123333332 45678999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCcEEEEeccHHHHHHHHHHHHHHHHHHHhhccCCCCceeeeeeeEEEEEeecCCCCceeeEEEEEEeccCCCCC
Q 000391         1435 FVKTLDDRFIIKEIKKTEFDSFDKFALHYFKYMNESFDSGNQTCLAKVLGIYQVTIRQPKSGKEMRHDLMVMENLTFERN 1514 (1582)
Q Consensus      1435 F~~T~D~rfIIKtis~~E~~~fl~~lp~Yf~y~~~~~~~n~~TlL~Ki~Gly~i~~~~~~~g~~~k~~~iVMeNlf~~~~ 1514 (1582)
                      |+||.|||||||+|++.|+++|++|||+||+||.+++++..||+||||||+|||.+|++++||+.||++||||||||+++
T Consensus      1371 F~KTlDDRFIiKq~sk~EleSFikFAP~YFkYl~~s~~~~~PT~LAKIlGiyqV~vK~~~sgke~K~DvmVMENLfY~r~ 1450 (1598)
T KOG0230|consen 1371 FAKTLDDRFIIKQMSKTELESFIKFAPAYFKYLTESISQKSPTCLAKILGIYQVSVKSPKSGKETKMDVMVMENLFYGRK 1450 (1598)
T ss_pred             eeccccchhhhhhccHHHHHHHHhhhHHHHHHHHHHHhcCCcchhhhhheeEEEEEecCCCCceeEeeeeeehhhhhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeEEecCccCCCccCCCCCCCcceeccchhhccCCCCeeeCHHHHHHHHHHHHHHHHHHhhCCCC
Q 000391         1515 ITRQYDLKGALHARYNTTVDGSGDVLLDQNFVNDMNSSPLYVSNTAKRILQRAVWNDTTFLNVSGNL 1581 (1582)
Q Consensus      1515 i~~~yDLKGS~~~R~~~~~~~~~~vLkD~nf~~~~~~~pi~l~~~~k~~L~~~l~~Dt~FL~~~nim 1581 (1582)
                      ++|+||||||+|||++..+++.+.||+|+||+++++++||||++++|+.|.++|||||.||+++|||
T Consensus      1451 vsRifDLKGS~RnR~v~~t~~~d~VLLDeNlVe~~~~sPIfV~~~sK~lL~~aiwNDT~FLas~~VM 1517 (1598)
T KOG0230|consen 1451 VSRIFDLKGSLRNRYVPTTSGADEVLLDENLVEMMWTSPIYVGSHSKRLLRRAIWNDTSFLASINVM 1517 (1598)
T ss_pred             cceeeeccchhhhccCCCCCCCceEEecHHHHhhhhcCCeeehHhHHHHHHHHHhcchHHhhhcccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999

>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1	Back alignment and domain information

>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate	Back alignment and domain information

>smart00330 PIPKc Phosphatidylinositol phosphate kinases	Back alignment and domain information

>KOG0229 consensus Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]	Back alignment and domain information

>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit	Back alignment and domain information

>TIGR02339 thermosome_arch thermosome, various subunits, archaeal	Back alignment and domain information

>PLN03185 phosphatidylinositol phosphate kinase; Provisional	Back alignment and domain information

>KOG0364 consensus Chaperonin complex component, TCP-1 gamma subunit (CCT3) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>cd03343 cpn60 cpn60 chaperonin family	Back alignment and domain information

>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit	Back alignment and domain information

>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit	Back alignment and domain information

>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit	Back alignment and domain information

>PTZ00212 T-complex protein 1 subunit beta; Provisional	Back alignment and domain information

>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit	Back alignment and domain information

>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit	Back alignment and domain information

>cd03333 chaperonin_like chaperonin_like superfamily	Back alignment and domain information

>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit	Back alignment and domain information

>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit	Back alignment and domain information

>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit	Back alignment and domain information

>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit	Back alignment and domain information

>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit	Back alignment and domain information

>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit	Back alignment and domain information

>KOG0361 consensus Chaperonin complex component, TCP-1 eta subunit (CCT7) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit	Back alignment and domain information

>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []	Back alignment and domain information

>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit	Back alignment and domain information

>cd00309 chaperonin_type_I_II chaperonin families, type I and type II	Back alignment and domain information

>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit	Back alignment and domain information

>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism	Back alignment and domain information

>KOG0358 consensus Chaperonin complex component, TCP-1 delta subunit (CCT4) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit	Back alignment and domain information

>KOG0360 consensus Chaperonin complex component, TCP-1 alpha subunit (CCT1) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0363 consensus Chaperonin complex component, TCP-1 beta subunit (CCT2) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0359 consensus Chaperonin complex component, TCP-1 zeta subunit (CCT6) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0362 consensus Chaperonin complex component, TCP-1 theta subunit (CCT8) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>cd03344 GroEL GroEL_like type I chaperonin	Back alignment and domain information

>PRK00013 groEL chaperonin GroEL; Reviewed	Back alignment and domain information

>PRK12849 groEL chaperonin GroEL; Reviewed	Back alignment and domain information

>PTZ00114 Heat shock protein 60; Provisional	Back alignment and domain information

>TIGR02348 GroEL chaperonin GroL	Back alignment and domain information

>PRK12851 groEL chaperonin GroEL; Reviewed	Back alignment and domain information

>PRK12850 groEL chaperonin GroEL; Reviewed	Back alignment and domain information

>PRK12852 groEL chaperonin GroEL; Reviewed	Back alignment and domain information

>CHL00093 groEL chaperonin GroEL	Back alignment and domain information

>PRK14104 chaperonin GroEL; Provisional	Back alignment and domain information

>PLN03167 Chaperonin-60 beta subunit; Provisional	Back alignment and domain information

>KOG0357 consensus Chaperonin complex component, TCP-1 epsilon subunit (CCT5) [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms]	Back alignment and domain information

>KOG0356 consensus Mitochondrial chaperonin, Cpn60/Hsp60p [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1582
1q3r_A		548	Crystal Structure Of The Chaperonin From Thermococc		6e-12
1q2v_A		548	Crystal Structure Of The Chaperonin From Thermococc		6e-12
1q3s_A		548	Crystal Structure Of The Chaperonin From Thermococc		7e-12
3iyg_G		515	Ca Model Of Bovine TricCCT DERIVED FROM A 4.0 ANGST		4e-09
3ko1_A		553	Cystal Structure Of Thermosome From Acidianus Tengc		5e-09
3aq1_B		500	Open State Monomer Of A Group Ii Chaperonin From Me		5e-09
3p9d_C		590	The Crystal Structure Of Yeast Cct Reveals Intrinsi		2e-08
1a6d_A		545	Thermosome From T. Acidophilum Length = 545		1e-07
2gk9_A		392	Human Phosphatidylinositol-4-Phosphate 5-Kinase, Ty		2e-07
3izi_A		513	Mm-Cpn Rls With Atp Length = 513		5e-07
3izh_A		513	Mm-Cpn D386a With Atp Length = 513		2e-06
3izk_A		491	Mm-Cpn Rls Deltalid With Atp Length = 491		5e-06
2ybx_A		394	Crystal Structure Of Human Phosphatidylinositol-5-P		5e-06
3j02_A		491	Lidless D386a Mm-Cpn In The Pre-Hydrolysis Atp-Boun		5e-06
3izn_A		491	Mm-Cpn Deltalid With Atp Length = 491		1e-05
3iyf_A		521	Atomic Model Of The Lidless Mm-Cpn In The Open Stat		1e-05
1a6d_B		543	Thermosome From T. Acidophilum Length = 543		2e-05
3rus_A		543	Crystal Structure Of Cpn-Rls In Complex With Adp Fr		3e-05
3los_A		543	Atomic Model Of Mm-Cpn In The Closed State Length =		1e-04
1gml_A		178	Crystal Structure Of The Mouse Cct Gamma Apical Dom		4e-04

>pdb|1Q3R|A Chain A, Crystal Structure Of The Chaperonin From Thermococcus Strain Ks-1 (Nucleotide-Free Form Of Single Mutant) Length = 548