Citrus Sinensis ID: 000399
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1566 | 2.2.26 [Sep-21-2011] | |||||||
| Q55FJ0 | 2179 | Probable inactive serine/ | yes | no | 0.220 | 0.158 | 0.362 | 1e-70 | |
| D4A929 | 1933 | WD repeat-containing prot | yes | no | 0.223 | 0.181 | 0.396 | 3e-68 | |
| Q562E7 | 1941 | WD repeat-containing prot | yes | no | 0.231 | 0.186 | 0.404 | 5e-68 | |
| Q5ND34 | 1934 | WD repeat-containing prot | yes | no | 0.230 | 0.186 | 0.403 | 8e-67 | |
| Q10122 | 1336 | Uncharacterized WD repeat | yes | no | 0.142 | 0.166 | 0.456 | 1e-50 | |
| Q6ZS81 | 3184 | WD repeat- and FYVE domai | no | no | 0.150 | 0.073 | 0.331 | 3e-27 | |
| Q6VNB8 | 3508 | WD repeat and FYVE domain | no | no | 0.170 | 0.076 | 0.290 | 8e-27 | |
| Q8IZQ1 | 3526 | WD repeat and FYVE domain | no | no | 0.148 | 0.066 | 0.317 | 1e-26 | |
| Q9W4E2 | 3578 | Neurobeachin OS=Drosophil | no | no | 0.168 | 0.073 | 0.299 | 2e-26 | |
| Q9EPN1 | 2936 | Neurobeachin OS=Mus muscu | no | no | 0.149 | 0.079 | 0.308 | 5e-25 |
| >sp|Q55FJ0|LVSG_DICDI Probable inactive serine/threonine-protein kinase lvsG OS=Dictyostelium discoideum GN=lvsG PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 269 bits (687), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/472 (36%), Positives = 232/472 (49%), Gaps = 126/472 (26%)
Query: 221 PSFDESSVPGCLR-HPNVAPVLGLLKTSGL--------------------ITSVIPKTPY 259
PS D +S P L+ HPN+ P++ ++ I + K Y
Sbjct: 335 PSIDYTS-PNVLKLHPNLLPIIEIIYNDIDNNDNDNDDDDDKNNNNLNDKIFIIYKKYNY 393
Query: 260 TLENILQFSPNALKSEWHVR-FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318
TL+ +L++S L+ + F++YQL+ ++LH I H + PSN+ L + W L
Sbjct: 394 TLDGLLRYSLQYLQRNQKITTFMIYQLIQLFSFLHQREIVHGDLQPSNIHLNNQMWLGL- 452
Query: 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378
GF + P++P+ +E + S N+W GEL
Sbjct: 453 ------EGF-------SFPSTPLYHQPLEN----------------QFESSMNKWINGEL 483
Query: 379 SNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKP---DENFDS--------------- 420
SNF YL+ LN LA R GD H V+PWVIDF+T P D + DS
Sbjct: 484 SNFNYLMILNHLAHRHIGDPMNHPVLPWVIDFTTSPINIDNDNDSRDDVDNSSSSNNNNN 543
Query: 421 -----------GSRDLSKSKWRLAKGDEQLDFTYSSS----------------------- 446
G RDL+K+K+RL KGDEQLDF + ++
Sbjct: 544 NNNEDQSGKTVGWRDLTKTKYRLNKGDEQLDFQFFNTGNSTTLGDDSMGGGIGSIGSTGG 603
Query: 447 ----------------EIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPS 490
HH+SD LSEL SY ARR + +LR VR+ YEPNEYP+
Sbjct: 604 ITNSSNNGGGGGSGNSGKAHHISD-ILSELTYYSYLARRTSVPLLRRFVRTNYEPNEYPA 662
Query: 491 TMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWA--GSPEEFIKLHRDALESDR 548
TM+RLY+WTPDECIPEF+ D IF S H M DL +P W S +EFIK+H +ALESD
Sbjct: 663 TMERLYRWTPDECIPEFFTDSTIFKSIHSDMPDLQLPDWVPNQSTQEFIKIHMNALESDH 722
Query: 549 VSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHP 600
VS ++H WID+TFGY +SG+ AI AKN+ L + T P++ G +QLF PHP
Sbjct: 723 VSKQLHSWIDLTFGYLLSGEEAIKAKNLAL--MDTTIPRNNGIVQLFNHPHP 772
|
Dictyostelium discoideum (taxid: 44689) |
| >sp|D4A929|WDR81_RAT WD repeat-containing protein 81 OS=Rattus norvegicus GN=Wdr81 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 165/416 (39%), Positives = 221/416 (53%), Gaps = 66/416 (15%)
Query: 221 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVR 279
PS S+ P LR LL++ ++ V P ++L +++ FSP L S+ V
Sbjct: 204 PSRGSSACPSLLR------AEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVL 257
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC-----------------DK 322
F+++++L A+ H G+A ++ ++ + + S L + +K
Sbjct: 258 FILFRVLRAMDACHRQGLACGALSLHHIAVDEKLCSELRLDLSAYEMPSEDENQEVSEEK 317
Query: 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382
G S D P GC +GL D W G +SNF
Sbjct: 318 DRTGVKSEKDGEGRP-----GCPTCQKELRGLVLD---------------WVHGRVSNFY 357
Query: 383 YLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFT 442
YL+ LN+LAGRR GD +H V+PWV+DF+T P F RDL KSK+RL KGD+QLDFT
Sbjct: 358 YLMQLNRLAGRRQGDPNYHPVLPWVVDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFT 412
Query: 443 YSSSE---------------IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNE 487
Y + +PHH+SD LS++ YKARR P SVL VR+ +EP+E
Sbjct: 413 YEMTRQAFVAGGAGSGEPLHVPHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHE 471
Query: 488 YPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESD 547
YP+TM+R+ WTPDECIPEFY DP IF S HP M DL VP W S +EF+ HR LES
Sbjct: 472 YPATMERMQTWTPDECIPEFYTDPSIFCSIHPDMPDLDVPAWCSSNQEFVTAHRALLESW 531
Query: 548 RVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
VS +HHWID+TFGYK+ G+ A+ KNV L + T S G +QLF QPHP R
Sbjct: 532 EVSQDLHHWIDLTFGYKLQGKEAVKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 587
|
Rattus norvegicus (taxid: 10116) |
| >sp|Q562E7|WDR81_HUMAN WD repeat-containing protein 81 OS=Homo sapiens GN=WDR81 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 261 bits (666), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 158/391 (40%), Positives = 217/391 (55%), Gaps = 29/391 (7%)
Query: 229 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 287
P C P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L
Sbjct: 213 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLR 269
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347
A+ H G+A ++ ++ + + S L + D + P + I
Sbjct: 270 AMDACHRQGLACGALSLYHIAVDEKLCSELRL-DLSAYERPEEDENEEAPVA-RDEAGIV 327
Query: 348 GCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWV 407
QG Q + S W G +SNF YL+ LN+LAGRR GD +H V+PWV
Sbjct: 328 SQEEQGGQPGQPTGQE-ELRSLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWV 386
Query: 408 IDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPHHV 452
+DF+T P F RDL KSK+RL KGD+QLDFTY + +PHH+
Sbjct: 387 VDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGGGEPPHVPHHI 441
Query: 453 SDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQ 512
SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY DP
Sbjct: 442 SD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFYTDPS 500
Query: 513 IFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAID 572
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 501 IFRSIHPDMPDLDVPAWCSSSQEFVAAHRALLESREVSRDLHHWIDLTFGYKLQGKEAVK 560
Query: 573 AKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
KNV L + T S G +QLF QPHP R
Sbjct: 561 EKNVCLHLVDAHTHLASYGVVQLFDQPHPQR 591
|
Homo sapiens (taxid: 9606) |
| >sp|Q5ND34|WDR81_MOUSE WD repeat-containing protein 81 OS=Mus musculus GN=Wdr81 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 256 bits (655), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 158/392 (40%), Positives = 218/392 (55%), Gaps = 31/392 (7%)
Query: 229 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 287
P C P++ LL++ ++ V P ++L +++ FSP L S+ V FL++++L
Sbjct: 211 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFLLFRVLR 267
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIA-DWCTIPTSPMIGCCI 346
A+ H G+A ++ ++ + + S L + L + + D + G I
Sbjct: 268 AMDACHRQGLACGALSLHHIAVDEKLCSELRL---DLSAYEMPSEDENQEGSEEKNGTGI 324
Query: 347 EGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPW 406
+ + Q + W G +SNF YL+ LN+LAGRR GD +H V+PW
Sbjct: 325 KSEKEGEGRTECPTCQK-ELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPW 383
Query: 407 VIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPHH 451
V+DF+T P F RDL KSK+RL KGD+QLDFTY + +PHH
Sbjct: 384 VVDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGSGEPPHVPHH 438
Query: 452 VSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDP 511
+SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+ WTPDECIPEFY DP
Sbjct: 439 ISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQTWTPDECIPEFYTDP 497
Query: 512 QIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAI 571
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 498 SIFCSIHPDMPDLDVPAWCSSNQEFVAAHRALLESWEVSQDLHHWIDLTFGYKLQGKEAV 557
Query: 572 DAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
KNV L + T S G +QLF QPHP R
Sbjct: 558 KEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 589
|
Mus musculus (taxid: 10090) |
| >sp|Q10122|YSM1_CAEEL Uncharacterized WD repeat-containing protein F52C9.1 OS=Caenorhabditis elegans GN=F52C9.1 PE=4 SV=2 | Back alignment and function description |
|---|
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/232 (45%), Positives = 142/232 (61%), Gaps = 9/232 (3%)
Query: 373 WWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRL 432
W + N++YL +LN + GR G+ H + PWV DFS +EN G R L+++K+RL
Sbjct: 239 WANRKWENYQYLTYLNDITGRVRGEVHNHPIFPWVCDFS---EEN--GGFRQLNRTKYRL 293
Query: 433 AKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTM 492
KGD+QL YS E HHV E LS++ Y+AR P L VR + P EYPSTM
Sbjct: 294 CKGDDQLREMYSR-EPSHHVP-ELLSDIGYMVYRARVEPKDNLCRHVRRKWVPEEYPSTM 351
Query: 493 QRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSR 552
R+YQWTPDECIPEFY DP IF S HP M DL P + SP+EFI+ HR LE + VS
Sbjct: 352 SRMYQWTPDECIPEFYDDPSIFNSCHPDMADLRFPEFVSSPQEFIEWHRKMLEHEEVSMN 411
Query: 553 IHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP--KSVGRLQLFTQPHPVR 602
+H WID+ FG+ ++ + +A N+ L E + ++ G +QLF +PHP+R
Sbjct: 412 LHRWIDLVFGFNLAIDNSKNALNLHLCFVEKNRRGLRTTGMVQLFNRPHPIR 463
|
Caenorhabditis elegans (taxid: 6239) |
| >sp|Q6ZS81|WDFY4_HUMAN WD repeat- and FYVE domain-containing protein 4 OS=Homo sapiens GN=WDFY4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 134/287 (46%), Gaps = 52/287 (18%)
Query: 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS--RDLSK 427
+W + ++SNFEYL++LN AGR DY + V PWV+ T N + RDLSK
Sbjct: 2539 LQKWQKRDISNFEYLMYLNTAAGRTCNDYMQYPVFPWVLADYTSETLNLANPKIFRDLSK 2598
Query: 428 --------SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTA- 478
K + + ++++ T + H S + V SY R P + A
Sbjct: 2599 PMGAQTKERKLKFIQRFKEVEKTEGDMTVQCHYYTHYSSAIIVASYLVRMPPFTQAFCAL 2658
Query: 479 --------------VRSVYEPNEYPSTMQRLYQWTPDEC-IPEFY--CDPQIFYSQHPG- 520
V+S +E + M + + TP+ +PEF C+ F G
Sbjct: 2659 QGGSFDVADRMFHSVKSTWE-SASRENMSDVRELTPEFFYLPEFLTNCNGVEFGCMQDGT 2717
Query: 521 -MTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVML 578
+ D+ +PPWA G P +FI LHR ALESD VS+ +HHWID+ FGYK G AA+DA N+
Sbjct: 2718 VLGDVQLPPWADGDPRKFISLHRKALESDFVSANLHHWIDLIFGYKQQGPAAVDAVNIFH 2777
Query: 579 PS--------SEPTKP----------KSVGRL--QLFTQPHPVRQTA 605
P S T P + G++ QLFT+PHP R A
Sbjct: 2778 PYFYGDRMDLSSITDPLIKSTILGFVSNFGQVPKQLFTKPHPARTAA 2824
|
Homo sapiens (taxid: 9606) |
| >sp|Q6VNB8|WDFY3_MOUSE WD repeat and FYVE domain-containing protein 3 OS=Mus musculus GN=Wdfy3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 124 bits (310), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 161/361 (44%), Gaps = 94/361 (26%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKW 430
RW RGE+SNF+YL+ LN LAGR + D + V PW++ ++DS DL+ K
Sbjct: 2678 QRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILS-------DYDSEEVDLTNPKT 2730
Query: 431 --RLAK-----GDEQL--------DFTYSSSEIP-HHVSDECLSELAVCSYKARRLPLS- 473
LAK DE+L D+ + E P +H S + V SY R P +
Sbjct: 2731 FRNLAKPMGAQTDERLAQYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLVRMEPFTQ 2790
Query: 474 -VLRT-------AVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQH------- 518
LR A R + E + + E IPEF+ P+ ++ +
Sbjct: 2791 IFLRLQGGHFDLADRMFHSVREAWYSASKHNMADVKELIPEFFYLPEFLFNSNNFDLGCK 2850
Query: 519 ---PGMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAK 574
+ D+ +PPWA G P EFI++HR+ALE D VS+ +H WID+ FGYK G AA++A
Sbjct: 2851 QNGTKLGDVILPPWAKGDPREFIRVHREALECDYVSAHLHEWIDLIFGYKQQGPAAVEAV 2910
Query: 575 NV-----------MLPSSEPTKPKSV-------GRL--QLFTQPHPVRQTATWEKGSRKC 614
NV + ++P K + G++ QLF +PHP ++
Sbjct: 2911 NVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKR----------- 2959
Query: 615 KFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPTKE 674
VRS+ N DN+ +P A ++ +++H ++ ++P KE
Sbjct: 2960 --VRSRLNG--DNIGISVPPGATSDKI----------------FFHHLDNLRPSLTPVKE 2999
Query: 675 F 675
Sbjct: 3000 L 3000
|
Mus musculus (taxid: 10090) |
| >sp|Q8IZQ1|WDFY3_HUMAN WD repeat and FYVE domain-containing protein 3 OS=Homo sapiens GN=WDFY3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 139/296 (46%), Gaps = 63/296 (21%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKW 430
RW RGE+SNF+YL+ LN LAGR + D + V PW++ ++DS DL+ K
Sbjct: 2696 QRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWIL-------ADYDSEEVDLTNPKT 2748
Query: 431 --RLAK-----GDEQL--------DFTYSSSEIP-HHVSDECLSELAVCSYKARRLPLS- 473
LAK DE+L D+ + E P +H S + V SY R P +
Sbjct: 2749 FRNLAKPMGAQTDERLAQYKKRYKDWEDPNGETPAYHYGTHYSSAMIVASYLVRMEPFTQ 2808
Query: 474 -VLRT-------AVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQH------- 518
LR A R + E + + E IPEF+ P+ ++ +
Sbjct: 2809 IFLRLQGGHFDLADRMFHSVREAWYSASKHNMADVKELIPEFFYLPEFLFNSNNFDLGCK 2868
Query: 519 ---PGMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAK 574
+ D+ +PPWA G P EFI++HR+ALE D VS+ +H WID+ FGYK G AA++A
Sbjct: 2869 QNGTKLGDVILPPWAKGDPREFIRVHREALECDYVSAHLHEWIDLIFGYKQQGPAAVEAV 2928
Query: 575 NV-----------MLPSSEPTKPKSV-------GRL--QLFTQPHPVRQTATWEKG 610
NV + ++P K + G++ QLF +PHP ++ + G
Sbjct: 2929 NVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKRVRSRLNG 2984
|
Homo sapiens (taxid: 9606) |
| >sp|Q9W4E2|NBEA_DROME Neurobeachin OS=Drosophila melanogaster GN=rg PE=1 SV=3 | Back alignment and function description |
|---|
Score = 122 bits (306), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 153/314 (48%), Gaps = 50/314 (15%)
Query: 340 PMIGCCIEGCSSQGLYADLKLSQSMDWHSQF-NRWWRGELSNFEYLLFLNKLAGRRWGDY 398
P +G I+ Q A + + + +S +W R E+SNFEYL+FLN +AGR + D
Sbjct: 2886 PRVGVGIKYGIPQTRRASMMSPRQLMRNSNMTQKWQRREISNFEYLMFLNTIAGRTYNDL 2945
Query: 399 TFHMVMPWVI-DFSTKP-DENFDSGSRDLSK-----SKWRLAKGDEQLDFTYSSSEIPHH 451
+ + PWV+ ++ +K D + S RDLSK + R A +E+ + S + P H
Sbjct: 2946 NQYPIFPWVLTNYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDSDTIPPFH 3005
Query: 452 VSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTM--------QRLYQWTPD-- 501
+ ++ R P + + A++ +YP + + + T D
Sbjct: 3006 YGTHYSTAAFTLNWLVRVEPFTTMFLALQG--GKFDYPDRLFSSVSLSWKNCQRDTSDVK 3063
Query: 502 ECIPEFYCDPQIFYS--------QHPG--MTDLAVPPWAGSPEEFIKLHRDALESDRVSS 551
E IPE+Y P++FY+ + G + D+ +PPWA SPEEF++++R ALES+ VS
Sbjct: 3064 ELIPEWYFLPEMFYNSSGYRLGHREDGALVDDIELPPWAKSPEEFVRINRMALESEFVSC 3123
Query: 552 RIHHWIDITFGYKMSGQAAIDAKNV------------------MLPSSEPTKPKSVGRL- 592
++H WID+ FGYK G AI A NV ++ + + ++ G+
Sbjct: 3124 QLHQWIDLIFGYKQRGPEAIRATNVFYYLTYEGSVDLDGVLDPVMREAVENQIRNFGQTP 3183
Query: 593 -QLFTQPHPVRQTA 605
QL +PHP R +A
Sbjct: 3184 SQLLMEPHPPRSSA 3197
|
Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. Required for correct retinal pattern formation and may function in cell fate determination through its interactions with the EGFR and Notch signaling pathways. Drosophila melanogaster (taxid: 7227) |
| >sp|Q9EPN1|NBEA_MOUSE Neurobeachin OS=Mus musculus GN=Nbea PE=1 SV=1 | Back alignment and function description |
|---|
Score = 118 bits (295), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 131/279 (46%), Gaps = 45/279 (16%)
Query: 372 RWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF--STKPDENFDSGSRDLSK-- 427
RW R E+SNFEYL+FLN +AGR + D + V PWV+ S + D RDLSK
Sbjct: 2278 RWQRREISNFEYLMFLNTIAGRTYNDLNQYPVFPWVLTNYESEELDLTLPGNFRDLSKPI 2337
Query: 428 ---SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSV--LRTAVRSV 482
+ R E+ + P H + + + S+ R P + L
Sbjct: 2338 GALNPKRAVFYAERYETWEEDQSPPFHYNTHYSTATSALSWLVRIEPFTTFFLNANDGKF 2397
Query: 483 YEPNEYPSTMQRLYQWTP------DECIPEFYCDPQIFYSQ---HPGM-------TDLAV 526
P+ S++ R ++ + E IPEFY P++F + H G+ D+ +
Sbjct: 2398 DHPDRTFSSIARSWRTSQRDTSDVKELIPEFYYLPEMFVNSNGYHLGVREDEVVVNDVDL 2457
Query: 527 PPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNV---------- 576
PPWA PE+F++++R ALES+ VS ++H WID+ FGYK G A+ A NV
Sbjct: 2458 PPWAKKPEDFVRINRMALESEFVSCQLHQWIDLIFGYKQRGPEAVRALNVFHYLTYEGSV 2517
Query: 577 --------MLPSSEPTKPKSVGRL--QLFTQPHPVRQTA 605
+L + + ++ G+ QL +PHP R +A
Sbjct: 2518 NLDSITDPVLREAMEAQIQNFGQTPSQLLIEPHPPRSSA 2556
|
Binds to type II regulatory subunits of protein kinase A and anchors/targets them to the membrane. May anchor the kinase to cytoskeletal and/or organelle-associated proteins. May have a role in membrane trafficking. Mus musculus (taxid: 10090) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1566 | ||||||
| 297736745 | 1609 | unnamed protein product [Vitis vinifera] | 0.940 | 0.915 | 0.685 | 0.0 | |
| 356574433 | 1659 | PREDICTED: uncharacterized protein LOC10 | 0.972 | 0.918 | 0.651 | 0.0 | |
| 356535948 | 1660 | PREDICTED: uncharacterized protein LOC10 | 0.969 | 0.915 | 0.651 | 0.0 | |
| 449441654 | 1652 | PREDICTED: uncharacterized protein LOC10 | 0.966 | 0.916 | 0.643 | 0.0 | |
| 297736790 | 1520 | unnamed protein product [Vitis vinifera] | 0.827 | 0.852 | 0.715 | 0.0 | |
| 449522694 | 1476 | PREDICTED: uncharacterized protein LOC10 | 0.860 | 0.913 | 0.675 | 0.0 | |
| 240256309 | 1639 | protein serine/threonine kinase [Arabido | 0.953 | 0.910 | 0.607 | 0.0 | |
| 359477635 | 1596 | PREDICTED: probable inactive serine/thre | 0.720 | 0.706 | 0.686 | 0.0 | |
| 359477620 | 1596 | PREDICTED: probable inactive serine/thre | 0.720 | 0.706 | 0.684 | 0.0 | |
| 357128121 | 1633 | PREDICTED: uncharacterized protein LOC10 | 0.948 | 0.909 | 0.521 | 0.0 |
| >gi|297736745|emb|CBI25946.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2161 bits (5600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1064/1552 (68%), Positives = 1234/1552 (79%), Gaps = 79/1552 (5%)
Query: 22 CFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLE 81
CFECL RR +SDFS++LIFSYG+S+S LPF S AVVQM N + E +++FILV +
Sbjct: 6 CFECLQRRFQSDFSNKLIFSYGVSDSGLPFGSGAVVQMANPNGEAA-SAEFILVCMPTHA 64
Query: 82 NDCLTKYVDEYVVDNNGGSDSQVEENDIVGSI------------SEQATSTDSLRDESRC 129
NDCL KYVDEY ++N GS + + IV I +++ S+DSL + S
Sbjct: 65 NDCLAKYVDEYFMENPEGSYKEGIGDIIVSEINQHQAEVGVPNLTDETASSDSLLNRSES 124
Query: 130 LANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGC 189
L NG + + + CNHS RFSCSR+++AL P+A IGICS IFEELAS+F SG
Sbjct: 125 LLNGDRKIILAGLRSRSSKCNHSSRFSCSRMISALAPVARIGICSDFIFEELASDFSSGS 184
Query: 190 LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249
+ED VL SL+LLIEGKA+G++S NFL L+G+PSF+E PGCL HPN+AP+LG+LKTS
Sbjct: 185 VEDHVLCSLSLLIEGKATGRDSINFLNLVGIPSFNEDIFPGCLMHPNIAPILGMLKTSDY 244
Query: 250 ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
+ V+PK PYTLENIL +SPNAL SEWH++FL+YQLLSA+AY+H LG+ H ++CPSNV+L
Sbjct: 245 VNLVLPKAPYTLENILHYSPNALNSEWHMKFLIYQLLSALAYIHGLGVTHGNICPSNVML 304
Query: 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQ 369
TDSCWSWL IC C SQ LYADLKLS S+DWH
Sbjct: 305 TDSCWSWLRIC----------------------------CPSQDLYADLKLSPSIDWHLN 336
Query: 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSK 429
F+RWWRG+LSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS KPDEN D G RDLSKSK
Sbjct: 337 FDRWWRGDLSNFEYLLILNRLAGRRWGDHTFHTVMPWVIDFSIKPDENVDEGWRDLSKSK 396
Query: 430 WRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYP 489
WRLAKGDEQLDFTYS+SEIPHHVS+ECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYP
Sbjct: 397 WRLAKGDEQLDFTYSTSEIPHHVSEECLSELAVCSYKARRLPLSVLRLAVRSVYEPNEYP 456
Query: 490 STMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRV 549
S MQRLYQWTPDECIPEFYCDPQIF S H GM DLAVP WA SPEEFIK+HRDALESDRV
Sbjct: 457 SNMQRLYQWTPDECIPEFYCDPQIFRSLHSGMADLAVPSWARSPEEFIKVHRDALESDRV 516
Query: 550 SSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEK 609
S +IHHWIDITFGYKMSGQAA+ AKNVMLPS+EP P
Sbjct: 517 SCQIHHWIDITFGYKMSGQAALAAKNVMLPSTEPMMP----------------------- 553
Query: 610 GSRKCKFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYI 669
+E+ LLP+ YLQ+LEEA AFS+HA HLSP Y H ++ +
Sbjct: 554 -------------SELVGEKPLLPQTVYLQDLEEAAAFSEHAWHLSPLYCYHPKNLADDV 600
Query: 670 SPTKEFSSESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKS 728
S +E SES IS E G+++ V S+IDL YLL+++EV+DEGS+ YQELLLWRQKS
Sbjct: 601 SSVEEPPSESSKKGISKTPELGNKNGVPSEIDLNYLLDYIEVDDEGSVGYQELLLWRQKS 660
Query: 729 SYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILV 788
SK S+D +KDIFS+GC+LAELHLRRPLFDS SLA+YLENG LPG+++ELP HT+ LV
Sbjct: 661 YCSKALSEDVAKDIFSVGCILAELHLRRPLFDSTSLAMYLENGILPGLIQELPPHTKALV 720
Query: 789 EACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALK 848
EACI KDW RRPSAKSL ESPYF +TV+SSYLFVAPLQL+A+ GS L+YAANFAK GALK
Sbjct: 721 EACILKDWRRRPSAKSLFESPYFLTTVRSSYLFVAPLQLLAKDGSHLRYAANFAKQGALK 780
Query: 849 AMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQT 908
AM +F AE CAPYCLPLV PLSD EAE AY+LLKEF+KCL KAV++++LPAIQKILQ
Sbjct: 781 AMRAFGAEMCAPYCLPLVVAPLSDTEAEWAYILLKEFLKCLKSKAVKSLVLPAIQKILQA 840
Query: 909 TGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSS 968
+ YSHLKVSLLQDSFVRE+WNR+GKQ YLEMVHPLVISNL+ APHKSSASAASVLLIG S
Sbjct: 841 S-YSHLKVSLLQDSFVREVWNRVGKQTYLEMVHPLVISNLFVAPHKSSASAASVLLIGFS 899
Query: 969 EELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSI 1028
EELGVPITVHQT+LPLI CFG+G+C DGIDV+VRIGGL GE FI R +LPLLK+V R I
Sbjct: 900 EELGVPITVHQTVLPLIHCFGKGLCTDGIDVLVRIGGLFGENFIARHILPLLKNVVRYCI 959
Query: 1029 DVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLE 1088
DVS+ NKPEP+QSWSAL+LIDCLM +GLV LP+E VVKEL ED+S +HVMVLM NLE
Sbjct: 960 DVSSMNKPEPMQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQANLE 1019
Query: 1089 ITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKP 1148
I VLQVAA+ L+A+CQRIGPDLTA HVLP LKELFDELAFSQE ++ SGSLG +LK K
Sbjct: 1020 IPVLQVAANYLIALCQRIGPDLTAFHVLPKLKELFDELAFSQETANGSGSLGRALKFSKS 1079
Query: 1149 KVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESS 1208
KVD ++Q+ SRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQ+LLR HNWKWE+TGESS
Sbjct: 1080 KVDEDAQMGSRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQYLLRCHNWKWEHTGESS 1139
Query: 1209 RISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKS 1268
R ENISA RP+ +KGS S+ NPAKLLLNGVGWSIPQSQG R +KNLI Q+R Y H+
Sbjct: 1140 RTGAENISANRPIFSKGSVSEYNPAKLLLNGVGWSIPQSQGIRGAKNLIAQKRFYSLHQD 1199
Query: 1269 SVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHG 1328
V+R A+S++ K EPWFWFP+PAASWDGPDFLGRVGGLKDE PWKI+AS++ S RAHHG
Sbjct: 1200 PVQRHAASSSIGKREPWFWFPSPAASWDGPDFLGRVGGLKDELPWKIRASVIHSARAHHG 1259
Query: 1329 ALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI 1388
ALRS+AV QDECTVFTAG+GPGFKGT+Q+WELT I+CVSGYYGHEEVVNDIC+LSSSGR+
Sbjct: 1260 ALRSLAVCQDECTVFTAGVGPGFKGTIQRWELTGIDCVSGYYGHEEVVNDICILSSSGRV 1319
Query: 1389 ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILS 1448
ASCDGT+H+WNSQTGKL+ VF+E S DSLH SP SS SKIN DQ MLN N+L+SGIL+
Sbjct: 1320 ASCDGTIHIWNSQTGKLIKVFSEPSADSLHLASPLSSASKINNDQANMLNPNSLTSGILT 1379
Query: 1449 TAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508
+AFDG+LYTC+H +E VE+LVVG GNGSLRFID+ QGQKLHLWR E + GFPS VSA+C
Sbjct: 1380 SAFDGSLYTCMHLLESVEKLVVGTGNGSLRFIDVVQGQKLHLWRSESIDSGFPSFVSAVC 1439
Query: 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKV 1560
+CGS++MQ GA A PSWIAAG SSG CRL DVRSGN+IASWRAHDGY+TK+
Sbjct: 1440 SCGSDRMQVDGASALPSWIAAGFSSGSCRLLDVRSGNLIASWRAHDGYITKL 1491
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356574433|ref|XP_003555352.1| PREDICTED: uncharacterized protein LOC100810047 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2053 bits (5319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1009/1549 (65%), Positives = 1220/1549 (78%), Gaps = 26/1549 (1%)
Query: 22 CFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLE 81
CFECL RIKSDFS+Q+ F+Y IS S PF SSA+V ++ ++ +QFIL Y + +
Sbjct: 8 CFECLQLRIKSDFSEQVFFNYAISTSAFPFGSSAIVNISGTADGESSGAQFILQYMPTRD 67
Query: 82 NDCLTKYVDEYVVDN----NGGSDSQVEENDIVGSISEQATSTDSLRDESRCLANGGGEK 137
+C YV+EY++D+ SD + ++ +++ + TS+D +
Sbjct: 68 KNCFINYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSD--------------DS 113
Query: 138 SKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGS 197
+ G+ C+HSGRFSC R +T+L PIA +G+ SYS F+E++++FL +ED VL S
Sbjct: 114 ESGKAFSGSTSCSHSGRFSCLRTITSLAPIARVGMSSYSTFQEVSTDFLCELIEDHVLES 173
Query: 198 LNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKT 257
L+L IEGKASG++S NFL LIG+PSF+E PG LRHPN+APVL + KTS + V+PKT
Sbjct: 174 LDLFIEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIFKTSDHVNVVLPKT 233
Query: 258 PYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317
PY LE+IL F+PNALKS W++ FLMYQLLSA++Y+H LG++H ++CPSN++LTDS WSWL
Sbjct: 234 PYNLESILHFNPNALKSNWNIIFLMYQLLSALSYIHGLGLSHGNICPSNIMLTDSLWSWL 293
Query: 318 YICDKPLVGFN-SIADWCTIPTSPM-IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWR 375
+ ++P++ N ++ + + P IGCC C S LYADLKLS ++DW S F++WWR
Sbjct: 294 RLWNEPVLESNLTLQESERDNSKPARIGCCNVACRSYDLYADLKLSPTIDWQSCFHKWWR 353
Query: 376 GELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKG 435
GELSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS+KPD++ D+G RDLSKSKWRLAKG
Sbjct: 354 GELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDSCDAGWRDLSKSKWRLAKG 413
Query: 436 DEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRL 495
DEQLDFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPSTMQRL
Sbjct: 414 DEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRL 473
Query: 496 YQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHH 555
YQWTPDECIPEFYC QIF S H GM DLAVP WA SPE+FIKLHRDALES+RVS ++HH
Sbjct: 474 YQWTPDECIPEFYCHAQIFKSIHDGMADLAVPSWAESPEDFIKLHRDALESNRVSFQLHH 533
Query: 556 WIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEK--GSRK 613
WIDITFGYKMSGQAAI AKNVMLP SEP P+S GR QLFTQPHP+R T K GS K
Sbjct: 534 WIDITFGYKMSGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIRHATTRTKRHGSNK 593
Query: 614 CKFVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-YNHQESFGMYISPT 672
V Q N E+ +SLL E AYLQELE+A FS+ ARHL+ Y Y ++ G IS
Sbjct: 594 YAKVWIQAN-EMHQETSLLSETAYLQELEQASTFSEQARHLNAYYHYPLNQTTGKNISSL 652
Query: 673 KEFSSESFVGTISN-PFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYS 731
+ ++E+F +IS + + V ++L L+H++ EDE S+ Y +LLLW+QK S S
Sbjct: 653 GDPTTETFSESISKLSLIDRNYQVPYRMNLISFLQHMKEEDESSLGYPDLLLWKQKLSSS 712
Query: 732 KTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEAC 791
+ S+D ++DIFSIGCLLAELHL RPLFD ISLA+YLE+G LPG +++LP R+LVEAC
Sbjct: 713 RLCSEDVARDIFSIGCLLAELHLCRPLFDPISLAIYLEDGTLPGFLQDLPPDIRLLVEAC 772
Query: 792 ITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMG 851
I KDWTRRPSAK LLESPYFP TVKSSYLF+APLQL+A+ +RL YAAN AK GAL+ MG
Sbjct: 773 IQKDWTRRPSAKILLESPYFPKTVKSSYLFLAPLQLVAKDETRLHYAANLAKHGALREMG 832
Query: 852 SFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGY 911
+FA E C YCLPL+ +SD EAE AY+LLKEF+KCL+ +A++T+ILP IQKILQTTGY
Sbjct: 833 AFATEMCTTYCLPLIVNAVSDTEAEWAYMLLKEFMKCLTVQAMKTLILPTIQKILQTTGY 892
Query: 912 SHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEEL 971
LKVSLLQDSFVREIWNR+GKQAYLE +HPLV+SNLY +P KSSA++ASVLLI SSEEL
Sbjct: 893 LRLKVSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYNSPDKSSAASASVLLISSSEEL 952
Query: 972 GVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVS 1031
GVPIT+HQTILPL+ CFG+G+C DGIDV+VRIGG+ GE FI++QM+PLLK+V RS IDVS
Sbjct: 953 GVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIIKQMVPLLKNVVRSFIDVS 1012
Query: 1032 NTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITV 1091
NK +PVQSWSAL+LIDC+MTLDGLV FL EV+VKEL+ED C+H+ VLM ++EI V
Sbjct: 1013 CMNKADPVQSWSALALIDCMMTLDGLVYFLTEEVIVKELLEDLCCIHIGVLMQKHMEIAV 1072
Query: 1092 LQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVD 1151
LQVAASTL ICQRIG DLTALH+LP LKELFDELAFSQE S S ++G +LKV K K+
Sbjct: 1073 LQVAASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIG 1132
Query: 1152 GESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRIS 1211
G+ IESRMDLVL+LYPSFASLLGIEKLRQCCATWL+LEQ LLR+HNWKWEY GESS+ S
Sbjct: 1133 GDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQHLLRHHNWKWEYAGESSKNS 1192
Query: 1212 EENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVE 1271
EN A+RP++ +G TS+ NPAKLLLNGVGWSIPQSQG RS+KNLIPQRR + H+S V
Sbjct: 1193 SENFLARRPVIAQGFTSEYNPAKLLLNGVGWSIPQSQG-RSAKNLIPQRRPFKVHQSPVA 1251
Query: 1272 RQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALR 1331
E S M EPWFWFP+PA WDGP+FLGRVG KDE PWKI+AS++ SIRAHHGA+R
Sbjct: 1252 VHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDELPWKIRASVIYSIRAHHGAVR 1311
Query: 1332 SVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC 1391
S+AV QDECTVFTAGIG G+KGTVQKWEL+R NC+SGY+GHEEVVNDI +LSSSGR+ASC
Sbjct: 1312 SLAVNQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDIYILSSSGRVASC 1371
Query: 1392 DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAF 1451
DGT+H+WNSQTGK + VFAE +S H S SS SKIN+DQ +LN NTLS+GILS+AF
Sbjct: 1372 DGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSASKINSDQANVLNMNTLSNGILSSAF 1431
Query: 1452 DGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1511
D +LYTC+H + E LVVG GNGSLRFID+ +GQKLH+WRGE T FPSL+SAIC+ G
Sbjct: 1432 DSSLYTCMHLLNSTETLVVGTGNGSLRFIDVARGQKLHIWRGESTVSSFPSLISAICSTG 1491
Query: 1512 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKV 1560
S+KMQAGG PS+IAAGLSSG C+LFD +SGNVI+SWRAHDGYVTK+
Sbjct: 1492 SDKMQAGGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKL 1540
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356535948|ref|XP_003536503.1| PREDICTED: uncharacterized protein LOC100809116 isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2044 bits (5295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1007/1545 (65%), Positives = 1225/1545 (79%), Gaps = 26/1545 (1%)
Query: 26 LHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLENDCL 85
L RIKSDFS+Q+ F+Y IS S PF SSA+V ++ ++ +QFIL Y S + +C
Sbjct: 13 LQLRIKSDFSEQVFFNYAISTSAFPFGSSAIVNISGTADGEASGAQFILQYMPSRDKNCF 72
Query: 86 TKYVDEYVVDN----NGGSDSQVEENDIVGSISEQATSTDSLRDESRCLANGGGEKSKDR 141
YV+EY++D+ SD + ++ +++ + TS+D D + +
Sbjct: 73 INYVNEYILDSGEITTRSSDPGIGSSEDNNAVNVRITSSDD-SDSGKAFS---------- 121
Query: 142 IEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLL 201
G+ C+HS RFSC R +T+L P+A +GI SYS F+E++++FLSG +ED VL SL+L
Sbjct: 122 ---GSTSCSHSERFSCLRTITSLAPVARVGISSYSTFQEVSTDFLSGLIEDHVLESLDLF 178
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
IEGKASG++S NFL LIG+PSF+E PG LRHPN+APVL + KTS + V+PK PY L
Sbjct: 179 IEGKASGRDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIFKTSDHVNVVLPKNPYNL 238
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
E+IL F+P+ALKS W+ FLMYQLLSA++Y+H LG++H ++CPSN++LTDS WSWL + +
Sbjct: 239 ESILHFNPDALKSNWNRIFLMYQLLSALSYIHGLGVSHGNICPSNIMLTDSLWSWLRLWN 298
Query: 322 KPLVGFN-SIADWCTIPTSPM-IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379
+P++ N ++ + + + P IGCC GC S GLYADL+LS ++DW S F++WWRGELS
Sbjct: 299 EPVLESNLTLQESERVNSEPARIGCCNVGCRSYGLYADLRLSPTIDWQSCFHKWWRGELS 358
Query: 380 NFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQL 439
NFEYLL LN+LAGRRWGD+TFH VMPWVIDFS+KPD+N D+G RDLSKSKWRLAKGDEQL
Sbjct: 359 NFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDTGWRDLSKSKWRLAKGDEQL 418
Query: 440 DFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWT 499
DFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPSTMQRLYQWT
Sbjct: 419 DFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRVAVRSVYEPNEYPSTMQRLYQWT 478
Query: 500 PDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDI 559
PDECIPEFYCD QIF S H GM DLAVP WA S E+FIKLHRDALES+RVS ++HHWIDI
Sbjct: 479 PDECIPEFYCDAQIFKSIHDGMADLAVPSWAESHEDFIKLHRDALESNRVSFQLHHWIDI 538
Query: 560 TFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQ--TATWEKGSRKCKFV 617
TFGYK+SGQAAI AKNVMLP SEP P+S GR QLFTQPHP+R T+T GS K V
Sbjct: 539 TFGYKISGQAAIAAKNVMLPISEPMMPRSTGRRQLFTQPHPIRHATTSTKRHGSNKYAKV 598
Query: 618 RSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-YNHQESFGMYISPTKEFS 676
SQ N +SLL E AYLQELE+A FS+HARHL+ Y Y ++ G IS + + +
Sbjct: 599 WSQAN-ATHRETSLLSETAYLQELEQASTFSEHARHLNAFYHYPLNQTRGKNISSSGDPT 657
Query: 677 SESFVGTISN-PFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFS 735
+E+F +IS + + V ++L L+H++ ED+GS Y +LLLW+QK S S+ S
Sbjct: 658 TETFSESISKLSLIDRNYQVPYKMNLISFLQHMKEEDKGSSGYPDLLLWKQKLSSSRLCS 717
Query: 736 KDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKD 795
+D ++DIFS+GCLLAELHL RPLFD ISLA+YLE+G LPG +++LP R+LVEACI KD
Sbjct: 718 EDIARDIFSVGCLLAELHLCRPLFDPISLAIYLEDGTLPGYLQDLPPDIRLLVEACIQKD 777
Query: 796 WTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGSFAA 855
W RRPSAK LLESPYFP+TVKSSYLF+APLQL+A+ +RL+YAAN AK GAL+ MG+FA
Sbjct: 778 WMRRPSAKILLESPYFPNTVKSSYLFLAPLQLVAKDETRLRYAANLAKHGALREMGTFAT 837
Query: 856 ERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYSHLK 915
E C YCLPL+ T +SD EAE AY+LLKEF+KCL+ +AV+T+ILP IQKILQTT Y LK
Sbjct: 838 EMCTTYCLPLIVTAVSDTEAEWAYMLLKEFMKCLTVQAVKTLILPTIQKILQTTSYLRLK 897
Query: 916 VSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELGVPI 975
VSLLQDSFVREIWNR+GKQAYLE +HPLV+SNLY +P KSSA++ASVLLI SSEELGVPI
Sbjct: 898 VSLLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKSSAASASVLLISSSEELGVPI 957
Query: 976 TVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNK 1035
T+HQTILPL+ CFG+G+C DGIDV+VRIGG+ GE FIV+QM+PLLK+V RS IDVS NK
Sbjct: 958 TIHQTILPLVHCFGKGLCSDGIDVLVRIGGIFGELFIVKQMVPLLKNVVRSFIDVSCMNK 1017
Query: 1036 PEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVLQVA 1095
P+PVQSWSAL+LIDC++TLDGLVAFL EV+VKEL+ED SC+H+ VLM ++EI VLQVA
Sbjct: 1018 PDPVQSWSALALIDCMLTLDGLVAFLTEEVIVKELLEDLSCIHIGVLMQKHMEIAVLQVA 1077
Query: 1096 ASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDGESQ 1155
ASTL ICQRIG DLTALH+LP LKELFDELAFSQE S S ++G +LKV K K+ G+
Sbjct: 1078 ASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIGGDLH 1137
Query: 1156 IESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISEENI 1215
IESRMDLVL+LYPSFASLLGIEKLRQCCATWL+LEQ+LLR+HNWKWEY GESS+ E +
Sbjct: 1138 IESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQYLLRHHNWKWEYAGESSKNGSEIV 1197
Query: 1216 SAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEA 1275
A+RP++ G TS+ NPAKLLLNGVGWSIPQSQG RS+KNLIPQR+ + H+S V E
Sbjct: 1198 LARRPVIAHGFTSEYNPAKLLLNGVGWSIPQSQG-RSAKNLIPQRQPFKVHQSPVAVHEE 1256
Query: 1276 TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAV 1335
S M EPWFWFP+PA WDGP+FLGRVG KD+ PWKI+A+++ SIRAHHGA+RS+AV
Sbjct: 1257 MSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRATVIYSIRAHHGAVRSLAV 1316
Query: 1336 GQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTL 1395
QDECTVFTAGIG G+KGTVQKWEL+R NC+SGY+GHEEVVNDIC+LSSSGR+ASCDGT+
Sbjct: 1317 NQDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDICILSSSGRVASCDGTI 1376
Query: 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455
H+WNSQTGK + VFAE +S H S SS SKIN+DQ +LN NTLSSGILS+AFD +L
Sbjct: 1377 HIWNSQTGKQILVFAESQTESGHPTSHPSSSSKINSDQANVLNLNTLSSGILSSAFDSSL 1436
Query: 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515
YTC+H + E LVVG GNGSLRF D+ +GQKLH+WRGE TE FPSL+SAIC+ GS+KM
Sbjct: 1437 YTCMHLLNSAETLVVGTGNGSLRFFDVARGQKLHIWRGESTESSFPSLISAICSTGSDKM 1496
Query: 1516 QAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKV 1560
QAGG PS+IAAGLSSG C+LFD +SGNVI+SWRAHDGYVTK+
Sbjct: 1497 QAGGISTFPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKL 1541
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449441654|ref|XP_004138597.1| PREDICTED: uncharacterized protein LOC101204693 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2034 bits (5270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1006/1564 (64%), Positives = 1228/1564 (78%), Gaps = 50/1564 (3%)
Query: 16 QQQLHFCFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILV 75
++Q FC+ECL RIK DFSD+LI SY + +S PF S+AVVQ N + SQF++V
Sbjct: 2 EEQTRFCYECLKSRIKFDFSDRLIVSYAVCDSAFPFTSTAVVQATNGETS---GSQFMIV 58
Query: 76 YCRSLENDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATST---------DSLRDE 126
Y + +++C+T YV+EY++DN V S+SE++ T DS+R
Sbjct: 59 YLPAHDHNCITNYVNEYLLDN-------------VNSLSEESFHTMSPVSADQEDSIRAG 105
Query: 127 SRCLANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFL 186
S L+ G + + + Y NHS R SCSRI+++L P+A + + S SIFEE+ASN L
Sbjct: 106 SLHLSQIGEKSATESPNY-----NHSSRLSCSRIISSLAPVARVCVSSPSIFEEVASNLL 160
Query: 187 SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246
SG LED VL SL LLIEG+ASG++S NFL L+G+P F E+ CLRHPNV PVL +L+T
Sbjct: 161 SGSLEDHVLHSLCLLIEGRASGRDSVNFLSLLGIPFFQENVFQNCLRHPNVVPVLSMLRT 220
Query: 247 SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306
SG +++P TPYTLENIL +SP+ALKSEWH+RFL+YQLLSA+A++H LGI H +CPSN
Sbjct: 221 SGYTNAILPSTPYTLENILHYSPDALKSEWHIRFLLYQLLSALAFIHGLGIFHGKICPSN 280
Query: 307 VLLTDSCWSWLYICDKP--LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM 364
V+L D CWSWL+ICD P + N + C++ TS I C + CSS+ LYAD KLS S+
Sbjct: 281 VMLNDMCWSWLHICDMPGLVCDLNRKENNCSMTTSEQINCYAKDCSSKALYADFKLSSSI 340
Query: 365 DWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRD 424
DW S F RWWRGELSNFEYLL LN+LAGRRW D+ FH +MPWVIDFSTKPDE+ D G RD
Sbjct: 341 DWPSDFFRWWRGELSNFEYLLALNRLAGRRWDDHKFHTIMPWVIDFSTKPDESSDVGWRD 400
Query: 425 LSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYE 484
LSKSKWRLAKGDEQLDFTY +SEIPHHVSDECLSELAVCSYKARRLPLS+LR AVRSVYE
Sbjct: 401 LSKSKWRLAKGDEQLDFTYIASEIPHHVSDECLSELAVCSYKARRLPLSILRMAVRSVYE 460
Query: 485 PNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDAL 544
PNEYPS MQRLYQWTPDECIPEFYCD QIFYS H GM DLAVPPWAGSPEEFIKLHRDAL
Sbjct: 461 PNEYPSNMQRLYQWTPDECIPEFYCDSQIFYSMHDGMADLAVPPWAGSPEEFIKLHRDAL 520
Query: 545 ESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQT 604
ESDRVS+++H WIDI FGYKMSG+AAIDAKNVMLP SEPT P+S+GR QLF++PHP RQ
Sbjct: 521 ESDRVSAKLHEWIDIAFGYKMSGEAAIDAKNVMLPLSEPTVPRSMGRRQLFSRPHPKRQV 580
Query: 605 ATWEKGSRKCK-----FVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY- 658
T R C+ V + +E+++ +S++ E YL+ELE A +F + RHLS Y
Sbjct: 581 LT----KRSCQSPVISVVNRGHASEMEDKNSIMSEIMYLEELEVASSFLEEGRHLSALYG 636
Query: 659 YNHQESFGMYISPTKEFSS-ESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSM 716
Y ++ M +KE SS +SF +SN + ++H ++I L YLLEH+EVE + S+
Sbjct: 637 YFAKKPEDM---SSKELSSAKSFNRCLSNSSDIFAQHEQRTNITLNYLLEHVEVESKDSI 693
Query: 717 EYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGV 776
YQELL W++K + FS + DIFSIGC+LAELHL++PLF S SLA+YLE+G LPG
Sbjct: 694 GYQELLSWKEKM-FHLQFSDGVASDIFSIGCILAELHLKKPLFHSTSLAMYLESGILPGF 752
Query: 777 MEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQ 836
++ELP +ILVEACI KD TRRPSAK++LESPYFP+T+KS YLF+APLQL+A+ +RL+
Sbjct: 753 IQELPPDIKILVEACIQKDLTRRPSAKNILESPYFPATIKSCYLFLAPLQLLAKDATRLR 812
Query: 837 YAANFAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRT 896
Y ANFAK GALKAMG FAAE CAPYC+PL+ TP +D E E AYVLLKEF+KCL PKAV+T
Sbjct: 813 YVANFAKQGALKAMGDFAAEMCAPYCMPLILTPQTDDEVEWAYVLLKEFLKCLMPKAVKT 872
Query: 897 MILPAIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSS 956
++LP IQKILQ TGYSHLKVSLLQDSFVREIWNR+GKQ Y+E +HPLVISNL APHKSS
Sbjct: 873 LVLPGIQKILQVTGYSHLKVSLLQDSFVREIWNRVGKQVYMETIHPLVISNLSVAPHKSS 932
Query: 957 ASAASVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQM 1016
A+AASVLLIGS EELG+P+T++QTILPLI CFG+GIC DG+D +VRIGGL G+TFI++QM
Sbjct: 933 AAAASVLLIGSCEELGMPVTINQTILPLINCFGKGICADGMDALVRIGGLFGDTFIIKQM 992
Query: 1017 LPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSC 1076
LPLLK+V R I S+ +KPEP+QSWS+L+LIDC TLDGLVA+LP EVV+ ELIE + C
Sbjct: 993 LPLLKNVVRCCIKFSSVSKPEPMQSWSSLALIDCFTTLDGLVAYLPGEVVLNELIEGQKC 1052
Query: 1077 LHVMVLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDES 1136
LHVMVL+ NL+++VLQVAAS+LM ICQ IG D+TALH++P L+E+FDELAFSQE + S
Sbjct: 1053 LHVMVLIQKNLDVSVLQVAASSLMTICQLIGSDMTALHLIPQLREVFDELAFSQEAAYRS 1112
Query: 1137 GSLGGSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRY 1196
S+G ++K KP +DG+ E RMDLVL+LYP+FAS+LGIEKLRQCC TWLLLEQ+LLRY
Sbjct: 1113 TSIGRNMKSSKPSIDGDVLNERRMDLVLILYPTFASILGIEKLRQCCTTWLLLEQYLLRY 1172
Query: 1197 HNWKWEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNL 1256
HNWKWE TG SSR S E + +KR +K STS+ +PAKLLLNGVGWSIPQSQ ++ +KNL
Sbjct: 1173 HNWKWECTGMSSRCSSEKLISKRNEFSKSSTSEYSPAKLLLNGVGWSIPQSQRAQGAKNL 1232
Query: 1257 IPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIK 1316
+P R +D H S++ +TS+ +K EPWFWFP+ A+ WDGPDFLGR GLK+E PWKIK
Sbjct: 1233 MPLR--HDVHGGSMQMHASTSHSIKAEPWFWFPSIASCWDGPDFLGRAVGLKEEHPWKIK 1290
Query: 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVV 1376
AS++ S+RAH GA+RS+A+ DE VFTAGIG GFKG VQ+WEL+ +NCVSGYYGHEEVV
Sbjct: 1291 ASVIYSVRAHQGAVRSLAICPDEFNVFTAGIGSGFKGMVQRWELSTVNCVSGYYGHEEVV 1350
Query: 1377 NDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1436
NDICVLS +GRIASCDGT+HVWNS++GKL+SVFAE S+DS H SP SS+ K N D V +
Sbjct: 1351 NDICVLSPTGRIASCDGTIHVWNSRSGKLISVFAESSVDSAHLASPLSSVLKPNMDHVNL 1410
Query: 1437 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496
++SN+LSSGIL++AFDG+LYT +HH+E E+LVVG GNGSLRFID+ QGQKLHLWRG+
Sbjct: 1411 ISSNSLSSGILTSAFDGSLYTYMHHLEFAEKLVVGTGNGSLRFIDVAQGQKLHLWRGDGV 1470
Query: 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556
E GFPSLVSAI +CG +KM A GA A P+WIAAGLSSG CRLFDVRSGNVIA+WRAHDGY
Sbjct: 1471 ESGFPSLVSAIGSCGFDKMVADGASAMPTWIAAGLSSGYCRLFDVRSGNVIATWRAHDGY 1530
Query: 1557 VTKV 1560
VTK+
Sbjct: 1531 VTKL 1534
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297736790|emb|CBI25991.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2011 bits (5210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 974/1362 (71%), Positives = 1115/1362 (81%), Gaps = 66/1362 (4%)
Query: 200 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 259
LLIEGKA+G++S NFL L+G+PSF+E PGCLRHPN+AP+LG+LKTS + V+PK PY
Sbjct: 106 LLIEGKATGRDSINFLNLVGIPSFNEDIFPGCLRHPNIAPILGMLKTSDYVNLVLPKAPY 165
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319
TLENIL +SPNAL SEWH++FL+YQLLSA+AY+H LG+ H ++CPSNV+LTDSCWSWL I
Sbjct: 166 TLENILHYSPNALNSEWHMKFLIYQLLSALAYIHGLGVTHGNICPSNVMLTDSCWSWLRI 225
Query: 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379
C C SQ LYADLKLS S+DWH F+RWWRG+LS
Sbjct: 226 C----------------------------CPSQDLYADLKLSPSIDWHLNFDRWWRGDLS 257
Query: 380 NFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQL 439
NFEYLL LN+LAGRRWGD+TFH VMPWVIDFS KPDEN D G RDLSKSKWRLAKGDEQL
Sbjct: 258 NFEYLLILNRLAGRRWGDHTFHTVMPWVIDFSIKPDENVDEGWRDLSKSKWRLAKGDEQL 317
Query: 440 DFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWT 499
DFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPS MQRLYQWT
Sbjct: 318 DFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRLAVRSVYEPNEYPSNMQRLYQWT 377
Query: 500 PDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDI 559
PDECIPEFYCDPQIF+S H GM DLAVP WA SPEEFIK+HRDALESD+VS +IHHWIDI
Sbjct: 378 PDECIPEFYCDPQIFHSLHSGMADLAVPSWARSPEEFIKVHRDALESDQVSCQIHHWIDI 437
Query: 560 TFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCKFVRS 619
TFGYKMSGQAA+ A NVMLPS+EP P
Sbjct: 438 TFGYKMSGQAALAAMNVMLPSTEPMMP--------------------------------- 464
Query: 620 QNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPTKEFSSES 679
+E+ LLP+ YLQ+LEEA AFS+HA HLSP Y H ++ +S +E SES
Sbjct: 465 ---SELVGEKPLLPQTVYLQDLEEAAAFSEHAWHLSPLYCYHPKNLADDVSSVEEPPSES 521
Query: 680 FVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDC 738
IS E G+++ V S+IDL YLL+++EV+DEGS+ YQELLLWRQKS S+ S+D
Sbjct: 522 SKKGISKTPELGNKNGVPSEIDLNYLLDYIEVDDEGSVGYQELLLWRQKSYCSRALSEDV 581
Query: 739 SKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKDWTR 798
+KDIFS+GC+LAELHLRRPLFDS SLA+YLENG LPG+++ELP HT+ LVEACI KDW R
Sbjct: 582 AKDIFSVGCILAELHLRRPLFDSTSLAMYLENGILPGLIQELPPHTKALVEACILKDWRR 641
Query: 799 RPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGSFAAERC 858
RPSAKSLLESPYF +TV+SSYLFVAPLQL+A+ GSRL+YAANFAK GALKAMG+F AE C
Sbjct: 642 RPSAKSLLESPYFLTTVRSSYLFVAPLQLLAKDGSRLRYAANFAKQGALKAMGAFGAEMC 701
Query: 859 APYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYSHLKVSL 918
APYCLPLV PLSD EAE AY+LLKEF+KCL KAV++++LPAIQKILQ + YSHLKVSL
Sbjct: 702 APYCLPLVVAPLSDTEAEWAYILLKEFLKCLKSKAVKSLVLPAIQKILQAS-YSHLKVSL 760
Query: 919 LQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELGVPITVH 978
LQDSFVRE+WNR+GKQ YLEMVHPLVISNL+ APHKSSASAASVLLIGSSEELGVPITVH
Sbjct: 761 LQDSFVREVWNRVGKQTYLEMVHPLVISNLFVAPHKSSASAASVLLIGSSEELGVPITVH 820
Query: 979 QTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEP 1038
QTILPLI CFG+G+C DGIDV+VRIGGL GE FI R +LPLLK+V R IDVS+ NKPEP
Sbjct: 821 QTILPLIHCFGKGLCTDGIDVLVRIGGLFGENFIARHILPLLKNVVRYCIDVSSMNKPEP 880
Query: 1039 VQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVLQVAAST 1098
+QSWSAL+LIDCLM +GLV LP+E VVKEL ED+S +HVMVLM NLEI VLQVAA+
Sbjct: 881 MQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQANLEIPVLQVAANY 940
Query: 1099 LMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDGESQIES 1158
L+A+CQRIGPDLTA HVLP LKELFDELAFSQE ++ SGSLG +LK K KVD E+ + S
Sbjct: 941 LIALCQRIGPDLTAFHVLPKLKELFDELAFSQETANGSGSLGRALKFAKSKVDEEAHMGS 1000
Query: 1159 RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISEENISAK 1218
RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQ+LLR HNWKWE+TGESSR ENISA
Sbjct: 1001 RMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQYLLRCHNWKWEHTGESSRTGAENISAN 1060
Query: 1219 RPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSN 1278
RP+ +KGS S+ NPAKLLLNGVGWSIPQSQG R +KNLI Q+R Y H+ V+R A+S+
Sbjct: 1061 RPIFSKGSVSEYNPAKLLLNGVGWSIPQSQGIRGAKNLIAQKRFYSLHQDPVQRHAASSS 1120
Query: 1279 LMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQD 1338
+ K EPWFWFP+PAASWDGPDFLGRVGGLKDE PWKI+AS++ S RAHHGALRS+AV QD
Sbjct: 1121 IGKREPWFWFPSPAASWDGPDFLGRVGGLKDELPWKIRASVIHSARAHHGALRSLAVCQD 1180
Query: 1339 ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVW 1398
ECTVFTAG+GPGFKGT+Q+WELT I+CVSGYYGHEEVVNDIC+LSSSGR+ASCDGT+H+W
Sbjct: 1181 ECTVFTAGVGPGFKGTIQRWELTGIDCVSGYYGHEEVVNDICILSSSGRVASCDGTIHIW 1240
Query: 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTC 1458
NSQTGKL+ VF+E S DSLH SP SS SKIN DQ MLN N+L+SGIL++AFDG+LYTC
Sbjct: 1241 NSQTGKLIKVFSEPSADSLHLASPLSSASKINNDQANMLNPNSLTSGILTSAFDGSLYTC 1300
Query: 1459 LHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAG 1518
+H +E VE+LVVG GNGSLRFID+ QGQKLHLWR E + GFPS VSA+C+CGS++MQ
Sbjct: 1301 MHLLESVEKLVVGTGNGSLRFIDVVQGQKLHLWRSESIDSGFPSFVSAVCSCGSDRMQVD 1360
Query: 1519 GAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKV 1560
GA A PSWIAAG SSG CRL D RSGN+IASWRAHDGY+TK+
Sbjct: 1361 GASALPSWIAAGFSSGSCRLLDARSGNLIASWRAHDGYITKL 1402
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449522694|ref|XP_004168361.1| PREDICTED: uncharacterized protein LOC101225335, partial [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1899 bits (4920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 924/1368 (67%), Positives = 1112/1368 (81%), Gaps = 20/1368 (1%)
Query: 203 EGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLE 262
EG+ASG++S NFL L+G+P F E+ CLRHPNV PVL +L+TSG +++P TPYTLE
Sbjct: 1 EGRASGRDSVNFLSLLGIPFFQENVFQNCLRHPNVVPVLSMLRTSGYTNAILPSTPYTLE 60
Query: 263 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322
NIL +SP+ALKSEWH+RFL+YQLLSA+A++H LGI H +CPSNV+L D CWSWL+ICD
Sbjct: 61 NILHYSPDALKSEWHIRFLLYQLLSALAFIHGLGIFHGKICPSNVMLNDMCWSWLHICDM 120
Query: 323 P--LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSN 380
P + N + C++ TS I C + CSS+ LYAD KLS S+DW S F RWWRGELSN
Sbjct: 121 PGLVCDLNRKENNCSMTTSEQINCYAKDCSSKALYADFKLSSSIDWPSDFFRWWRGELSN 180
Query: 381 FEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLD 440
FEYLL LN+LAGRRW D+ FH +MPWVIDFSTKPDE+ D G RDLSKSKWRLAKGDEQLD
Sbjct: 181 FEYLLALNRLAGRRWDDHKFHTIMPWVIDFSTKPDESSDVGWRDLSKSKWRLAKGDEQLD 240
Query: 441 FTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTP 500
FTY +SEIPHHVSDECLSELAVCSYKARRLPLS+LR AVRSVYEPNEYPS MQRLYQWTP
Sbjct: 241 FTYIASEIPHHVSDECLSELAVCSYKARRLPLSILRMAVRSVYEPNEYPSNMQRLYQWTP 300
Query: 501 DECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDIT 560
DECIPEFYCD QIFYS H GM DLAVPPWAGSPEEFIKLHRDALESDRVS+++H WIDI
Sbjct: 301 DECIPEFYCDSQIFYSMHDGMADLAVPPWAGSPEEFIKLHRDALESDRVSAKLHEWIDIA 360
Query: 561 FGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCK----- 615
FGYKMSG+AAIDAKNVMLP SEPT P+S+GR QLF++PHP RQ T R C+
Sbjct: 361 FGYKMSGEAAIDAKNVMLPLSEPTVPRSMGRRQLFSRPHPKRQVLT----KRSCQSPVIS 416
Query: 616 FVRSQNNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRY-YNHQESFGMYISPTKE 674
V + +E+++ +S++ E YL+ELE A +F + RHLS Y Y ++ M +KE
Sbjct: 417 VVNRGHASEMEDKNSIMSEIMYLEELEVASSFLEEGRHLSALYGYFAKKPEDM---SSKE 473
Query: 675 FSS-ESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSK 732
SS +SF +SN + ++H ++I L YLLEH+EVE + S+ YQELL W++K +
Sbjct: 474 LSSAKSFNRCLSNSSDIFAQHEQRTNITLNYLLEHVEVESKDSIGYQELLSWKEKM-FHL 532
Query: 733 TFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACI 792
FS + DIFSIGC+LAELHL++PLF S SLA+YLE+G LPG ++ELP +ILVEACI
Sbjct: 533 QFSDGVASDIFSIGCILAELHLKKPLFHSTSLAMYLESGILPGFIQELPPDIKILVEACI 592
Query: 793 TKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAMGS 852
KD TRRPSAK++LESPYFP+T+KS YLF+APLQL+A+ +RL+Y ANFAK GALKAMG
Sbjct: 593 QKDLTRRPSAKNILESPYFPATIKSCYLFLAPLQLLAKDATRLRYVANFAKQGALKAMGD 652
Query: 853 FAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTGYS 912
FAAE CAPYC+PL+ TP +D E E AYVLLKEF+KCL PKAV+T++LP IQKILQ TGYS
Sbjct: 653 FAAEMCAPYCMPLILTPQTDDEVEWAYVLLKEFLKCLMPKAVKTLVLPGIQKILQVTGYS 712
Query: 913 HLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLIGSSEELG 972
HLKVSLLQDSFVREIWNR+GKQ Y+E +HPLVISNL APHKSSA+AASVLLIGS EELG
Sbjct: 713 HLKVSLLQDSFVREIWNRVGKQVYMETIHPLVISNLSVAPHKSSAAAASVLLIGSCEELG 772
Query: 973 VPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSN 1032
+P+T++QTILPLI CFG+GIC DG+D +VRIGGL G+TFI++QMLPLLK+V R I S+
Sbjct: 773 MPVTINQTILPLINCFGKGICADGMDALVRIGGLFGDTFIIKQMLPLLKNVVRCCIKFSS 832
Query: 1033 TNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEITVL 1092
+KPEP+QSWS L+LIDC TLDGLVA+LP EVV+KELIE + CLHVMVL+ NL+++VL
Sbjct: 833 VSKPEPMQSWSCLALIDCFTTLDGLVAYLPGEVVLKELIEGQKCLHVMVLIQKNLDVSVL 892
Query: 1093 QVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKVDG 1152
QVAAS+LM ICQ IG D+TALH++P L+E+FDELAFSQE + S S+G ++K KP +DG
Sbjct: 893 QVAASSLMTICQLIGSDMTALHLIPQLREVFDELAFSQEAAYRSTSIGRNMKSSKPSIDG 952
Query: 1153 ESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRISE 1212
+ E RMDLVL+LYP+FAS+LGIEKLRQCC TWLLLEQ+LLRYHNWKWE TG SSR S
Sbjct: 953 DVLNEGRMDLVLILYPTFASILGIEKLRQCCTTWLLLEQYLLRYHNWKWECTGMSSRCSS 1012
Query: 1213 ENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVER 1272
E + +KR +KGSTS+ +PAKLLLNGVGWSIPQSQ ++ +KNL+P R +D H+ S++
Sbjct: 1013 EKLISKRNEFSKGSTSEYSPAKLLLNGVGWSIPQSQRAQGAKNLMPLR--HDVHRGSMQM 1070
Query: 1273 QEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRS 1332
+TS+ +K EPWFWFP+ A+ WDGPDFLGR GLK+E PWKIKAS++ S+RAH GA+RS
Sbjct: 1071 HASTSHSIKAEPWFWFPSIASCWDGPDFLGRAVGLKEEHPWKIKASVIYSVRAHQGAVRS 1130
Query: 1333 VAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCD 1392
+A+ DE VFTAGIG GFKG VQ+WEL+ +NCVSGYYGHEEVVNDICVLS +GRIASCD
Sbjct: 1131 LAICPDEFNVFTAGIGSGFKGMVQRWELSTVNCVSGYYGHEEVVNDICVLSPTGRIASCD 1190
Query: 1393 GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFD 1452
GT+HVWNS++GKL+SVFAE S+DS H SP SS+ K N D V +++SN+LSSGIL++AFD
Sbjct: 1191 GTIHVWNSRSGKLISVFAESSVDSAHLASPLSSVLKTNMDHVNLISSNSLSSGILTSAFD 1250
Query: 1453 GNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512
G+LYT +HHIE E+LVVG GNGSLRFID+ QGQKLHLWRG+ E GFPSLVSAI +CG
Sbjct: 1251 GSLYTYMHHIEFAEKLVVGTGNGSLRFIDVAQGQKLHLWRGDGVESGFPSLVSAIGSCGF 1310
Query: 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKV 1560
+KM A GA A P+WIAAGLSSG CRLFDVRSGNVIA+WRAHDGYVTK+
Sbjct: 1311 DKMVADGASAMPTWIAAGLSSGYCRLFDVRSGNVIATWRAHDGYVTKL 1358
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|240256309|ref|NP_974804.4| protein serine/threonine kinase [Arabidopsis thaliana] gi|332005192|gb|AED92575.1| protein serine/threonine kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1820 bits (4715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 947/1559 (60%), Positives = 1152/1559 (73%), Gaps = 66/1559 (4%)
Query: 21 FCFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSE--------NLLASQF 72
CF+CL +RI SDFSDQ++FSYG+S+SPLPF SSAVV++++SS E +SQF
Sbjct: 8 LCFDCLDQRINSDFSDQIVFSYGVSDSPLPFGSSAVVKVSDSSEEFSASCSSCESTSSQF 67
Query: 73 ILVYCRSLENDCLTKYVDEYVV-DNNGGSDSQVEENDIVGSISEQATSTDSLRDESRCLA 131
IL Y R E+ CL KYVD++VV D G S+ VE ++ + + + +T+
Sbjct: 68 ILEYLRKDEHGCLAKYVDKFVVKDREGNSNDAVESDECLDCSTSGSQATE---------- 117
Query: 132 NGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLE 191
+ + I G+ C HSG FSC R + AL PIA I CS S ++LAS+F C E
Sbjct: 118 ----DDDTENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCSASELQKLASSFHYECPE 173
Query: 192 DCVLGSLNLLIEGKASGQESKNFLRLIGVPSF-DESSVPGCLRHPNVAPVLGLLKTSGLI 250
D +L SL+ LI+GK+SGQ + +FL L+ +E S CLRHPN++PVLGLL +S +
Sbjct: 174 DQILASLHRLIDGKSSGQATHSFLCLLLGLPLLEEKSKLRCLRHPNLSPVLGLLTSSDCL 233
Query: 251 TSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
SV+PK PYTLENIL +SP+A+KSEWH F++YQLLSA+A+LH L ++H + PSN+LL+
Sbjct: 234 VSVLPKAPYTLENILYYSPSAIKSEWHRNFIIYQLLSALAHLHGLKVSHGDIRPSNILLS 293
Query: 311 DSCWSWLYICDKPLVG---FNSIAD---WCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM 364
DS WSWL I KP +G NS A WC +EGC S GLYADLK+S +
Sbjct: 294 DSLWSWLTIYSKPDLGSVDANSSASRRRWC-----------VEGCYSYGLYADLKISSHL 342
Query: 365 DWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRD 424
DW + F++WW+GELSNFEYLL LNKLAGRRWGD+TFH VMPWVIDFS KP+ + DSG RD
Sbjct: 343 DWQTHFDKWWKGELSNFEYLLVLNKLAGRRWGDHTFHPVMPWVIDFSKKPENDSDSGWRD 402
Query: 425 LSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYE 484
L KSKWRLAKGDEQLDFTYS+ E PHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYE
Sbjct: 403 LRKSKWRLAKGDEQLDFTYSTFEFPHHVSDECLSELAVCSYKARRLPLSVLRKAVRSVYE 462
Query: 485 PNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDAL 544
PNEYPS MQRLY WTPDECIPEFYCDP+IF S HP M+DLAVPPWA SP+EFI+LHRDAL
Sbjct: 463 PNEYPSDMQRLYDWTPDECIPEFYCDPRIFCSLHPSMSDLAVPPWASSPDEFIRLHRDAL 522
Query: 545 ESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQT 604
ES VSS IHHWIDITFGYKMSG AAI AKNVML SSEPT P+SVGR QLF +PHPVR
Sbjct: 523 ESPHVSSLIHHWIDITFGYKMSGHAAITAKNVMLSSSEPTVPRSVGRRQLFFRPHPVRLG 582
Query: 605 ATWEK-GSRKCKFVRSQNNNEVDNVSSLLPEA-AYLQELEEAFAFSDHARHLSPRYYNHQ 662
+ EK SR + + + VDN S++ A YL+E EEA AFSDHA HL P+Y+ +
Sbjct: 583 FSREKEQSRNELEMHTFHGFGVDNKRSVILLADEYLEETEEASAFSDHATHLCPKYHLRE 642
Query: 663 ESFGMYISPTK-EFSSESFVGTISNPFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQEL 721
+ SP +S + S P + ++ + S I L YLLEH+EV DE S E QEL
Sbjct: 643 ---NLVESPLHVSYSENTKKVNTSLPGTSKNKGLSSRISLNYLLEHMEVRDEASTELQEL 699
Query: 722 LLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELP 781
L WRQ + SKD + DIFSIGC+LAEL+L +PLF+S+SLA YLE GDLP +++ELP
Sbjct: 700 LQWRQDFC-TGNISKDIAGDIFSIGCVLAELYLMKPLFNSVSLATYLEGGDLPELIKELP 758
Query: 782 SHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANF 841
T+++VEACI +DW RRPSAKSLL+SPYF +TV+S++LF APLQL+A+ +RL YAA+F
Sbjct: 759 PPTQVIVEACIEQDWRRRPSAKSLLDSPYFSATVRSAHLFAAPLQLLAKGQTRLCYAASF 818
Query: 842 AKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPA 901
AK G LK MG+F AE CA YCLPLV TPLS+ E E AYVLLKEF K L+P AV+ ++LP+
Sbjct: 819 AKQGVLKVMGTFVAEMCAVYCLPLVTTPLSEDECELAYVLLKEFTKSLTPMAVQRLVLPS 878
Query: 902 IQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAAS 961
IQKIL TTGYSHLKVSLLQDSFVRE+WN+IGK+ YLEM+HPLVISNLY +P K SASAAS
Sbjct: 879 IQKILLTTGYSHLKVSLLQDSFVRELWNQIGKRVYLEMIHPLVISNLYNSPDKISASAAS 938
Query: 962 VLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLK 1021
VLLIGSSEELG P+TVHQTILPLI FG+GIC DGIDV+VRIG LLG FIV+QMLPLL+
Sbjct: 939 VLLIGSSEELGAPVTVHQTILPLISYFGKGICTDGIDVLVRIGRLLGVNFIVKQMLPLLE 998
Query: 1022 HVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMV 1081
HV ID+S+ KPEPV SW +L+L DCL+TLDGLVA + E+++ EL + R CLHV V
Sbjct: 999 HVVCFCIDLSSMKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHELTKGRLCLHVRV 1058
Query: 1082 LMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGG 1141
LM NLE+ VLQ AA++LM+ICQRIG ++TALHVLP LKELFDE AFS++ +D S SL
Sbjct: 1059 LMQKNLELRVLQFAATSLMSICQRIGQEMTALHVLPQLKELFDEFAFSEKSTDASDSLSW 1118
Query: 1142 SLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKW 1201
++ + K ES I+SRMDLVLLLYPSFASLLG+EKLRQ C TWLLLEQ+LL++HNWKW
Sbjct: 1119 KIRTAEQKFHPESPIKSRMDLVLLLYPSFASLLGMEKLRQGCPTWLLLEQYLLKHHNWKW 1178
Query: 1202 EYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRR 1261
EYTG SSR + E RP+L +G S+ P K+LLNG G S+PQSQG R+S +L
Sbjct: 1179 EYTGRSSRYNME----ARPVLKQGPASKHTP-KVLLNGSGRSVPQSQGLRNSNHLKLHIH 1233
Query: 1262 VYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILS 1321
V VE QEA N + EPW WFP+P WDG D +GR G KDE+ WKI+AS+LS
Sbjct: 1234 V------PVEGQEAVLNPLVHEPWSWFPSPVTCWDGLD-IGRFGNPKDENRWKIRASVLS 1286
Query: 1322 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICV 1381
S RAHHGALRS+ V +DECTVFT+GI PGFKG+VQKWEL ++CVS Y+ HEEVVNDI +
Sbjct: 1287 SARAHHGALRSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSYHAHEEVVNDIGI 1346
Query: 1382 LSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNT 1441
LSS+G++ASCDGT+HVWNSQTGKL+S+F+E D S S SK N++ S+
Sbjct: 1347 LSSTGKVASCDGTIHVWNSQTGKLISLFSESPSDQDQASSDPS--SKNNSNPCNRHASHG 1404
Query: 1442 LSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFP 1501
LSSGI FD NLYTC+H++E +++L+VG G G+LRFID+ +GQKL LW GE E GF
Sbjct: 1405 LSSGI----FDENLYTCMHYLEYMDQLIVGTGFGALRFIDLARGQKLELWGGEAIESGFT 1460
Query: 1502 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKV 1560
SLVSA+C+ GS+ GA SPSWIAAG SSGQCRLFD+R I+SWRAHDGYVTK+
Sbjct: 1461 SLVSALCSGGSQTKHGDGASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKL 1519
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477635|ref|XP_002274707.2| PREDICTED: probable inactive serine/threonine-protein kinase lvsG-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1586 bits (4107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 787/1146 (68%), Positives = 921/1146 (80%), Gaps = 18/1146 (1%)
Query: 22 CFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLE 81
CFECL RR +SDFS++LIFSYG+S+S LPF S AVVQM + + E +++FILV +
Sbjct: 6 CFECLQRRFQSDFSNKLIFSYGVSDSGLPFGSGAVVQMADPNGEAA-SAEFILVCMPTHA 64
Query: 82 NDCLTKYVDEYVVDNNGGSDSQVEENDIVGSI------------SEQATSTDSLRDESRC 129
NDCL KYVDEY ++N GS + + IV I +++ S+DSL + S
Sbjct: 65 NDCLAKYVDEYFMENPEGSYKEGIGDIIVSEINQHQAEVGVPNLTDETASSDSLLNRSES 124
Query: 130 LANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGC 189
L NG + + + CNHS RFSCSR+++AL P+A IGICS IFEELAS+F SG
Sbjct: 125 LLNGDRKIIPAGLRSRSSKCNHSSRFSCSRMISALAPVARIGICSDFIFEELASDFSSGS 184
Query: 190 LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249
+ED VL SL+LLIEGKA+G++S NFL L+G+PSF+E PGCLRHPN+AP+LG+LKTS
Sbjct: 185 VEDHVLCSLSLLIEGKATGRDSINFLNLVGIPSFNEDIFPGCLRHPNIAPILGMLKTSDY 244
Query: 250 ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
+ V+PK PYTLENIL +SPNAL SEWH++FL+YQLLSA+AY+H LG+ H ++CPSNV+L
Sbjct: 245 VNLVLPKAPYTLENILHYSPNALNSEWHMKFLIYQLLSALAYIHGLGVTHGNICPSNVML 304
Query: 310 TDSCWSWLYICDKPLVGFN--SIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWH 367
TDSCWSWL ICD P + N S + C I +S +GC I GC SQ LYADLKLS S+DWH
Sbjct: 305 TDSCWSWLRICDNPWLRSNLSSGNEECAIISSSRLGCFIAGCPSQDLYADLKLSPSIDWH 364
Query: 368 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSK 427
F+RWWRG+LSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS KPDEN D G RDLSK
Sbjct: 365 LNFDRWWRGDLSNFEYLLILNRLAGRRWGDHTFHTVMPWVIDFSIKPDENVDEGWRDLSK 424
Query: 428 SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNE 487
SKWRLAKGDEQLDFTYS+SEIPHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNE
Sbjct: 425 SKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRLAVRSVYEPNE 484
Query: 488 YPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESD 547
YPS MQRLYQWTPDECIPEFYCDPQIF+S H GM DLAVP WA SPEEFIK+HRDALESD
Sbjct: 485 YPSNMQRLYQWTPDECIPEFYCDPQIFHSLHSGMADLAVPSWARSPEEFIKVHRDALESD 544
Query: 548 RVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATW 607
+VS +IHHWIDITFGYKMSGQAA+ A NVMLPS+EP P+SVGR QLFTQPHP R+ ATW
Sbjct: 545 QVSCQIHHWIDITFGYKMSGQAALAAMNVMLPSTEPMMPRSVGRRQLFTQPHPTRRCATW 604
Query: 608 EKGSRKCKFVRSQ-NNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFG 666
+ G+ K Q +E+ LLP+ YLQ+LEEA AFS+HA HLSP Y H ++
Sbjct: 605 KTGNSTNKLAVHQCQGSELVGEKPLLPQTVYLQDLEEAAAFSEHAWHLSPLYCYHPKNLA 664
Query: 667 MYISPTKEFSSESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWR 725
+S +E SES IS E G+++ V S+IDL YLL+++EV+DEGS+ YQELLLWR
Sbjct: 665 DDVSSVEEPPSESSKKGISKTPELGNKNGVPSEIDLNYLLDYIEVDDEGSVGYQELLLWR 724
Query: 726 QKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTR 785
QKS S+ S+D +KDIFS+GC+LAELHLRRPLFDS SLA+YLENG LPG+++ELP HT+
Sbjct: 725 QKSYCSRALSEDVAKDIFSVGCILAELHLRRPLFDSTSLAMYLENGILPGLIQELPPHTK 784
Query: 786 ILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLG 845
LVEACI KDW RRPSAKSLLESPYF +TV+SSYLFVAPLQL+A+ GSRL+YAANFAK G
Sbjct: 785 ALVEACILKDWRRRPSAKSLLESPYFLTTVRSSYLFVAPLQLLAKDGSRLRYAANFAKQG 844
Query: 846 ALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKI 905
ALKAMG+F AE CAPYCLPLV PLSD EAE AY+LLKEF+KCL KAV++++LPAIQKI
Sbjct: 845 ALKAMGAFGAEMCAPYCLPLVVAPLSDTEAEWAYILLKEFLKCLKSKAVKSLVLPAIQKI 904
Query: 906 LQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLI 965
LQ + YSHLKVSLLQDSFVRE+WNR+GKQ YLEMVHPLVISNL+ APHKSSASAASVLLI
Sbjct: 905 LQAS-YSHLKVSLLQDSFVREVWNRVGKQTYLEMVHPLVISNLFVAPHKSSASAASVLLI 963
Query: 966 GSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVAR 1025
GSSEELGVPITVHQTILPLI CFG+G+C DGIDV+VRIGGL GE FI R +LPLLK+V R
Sbjct: 964 GSSEELGVPITVHQTILPLIHCFGKGLCTDGIDVLVRIGGLFGENFIARHILPLLKNVVR 1023
Query: 1026 SSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHT 1085
IDVS+ NKPEP+QSWSAL+LIDCLM +GLV LP+E VVKEL ED+S +HVMVLM
Sbjct: 1024 YCIDVSSMNKPEPMQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQA 1083
Query: 1086 NLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKV 1145
NLEI VLQVAA+ L+A+CQRIGPDLTA HVLP LKELFDELAFSQE ++ SGSLG +LK
Sbjct: 1084 NLEIPVLQVAANYLIALCQRIGPDLTAFHVLPKLKELFDELAFSQETANGSGSLGRALKF 1143
Query: 1146 PKPKVD 1151
K K +
Sbjct: 1144 AKSKYN 1149
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359477620|ref|XP_003632003.1| PREDICTED: probable inactive serine/threonine-protein kinase lvsG-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1579 bits (4088), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 785/1146 (68%), Positives = 916/1146 (79%), Gaps = 18/1146 (1%)
Query: 22 CFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLE 81
CFECL RR +SDFS++LIFSYG+S+S LPF S AVVQM N + E +++FILV +
Sbjct: 6 CFECLQRRFQSDFSNKLIFSYGVSDSGLPFGSGAVVQMANPNGEAA-SAEFILVCMPTHA 64
Query: 82 NDCLTKYVDEYVVDNNGGSDSQVEENDIVGSI------------SEQATSTDSLRDESRC 129
NDCL KYVDEY ++N GS + + IV I +++ S+DSL + S
Sbjct: 65 NDCLAKYVDEYFMENPEGSYKEGIGDIIVSEINQHQAEVGVPNLTDETASSDSLLNRSES 124
Query: 130 LANGGGEKSKDRIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGC 189
L NG + + + CNHS RFSCSR+++AL P+A IGICS IFEELAS+F SG
Sbjct: 125 LLNGDRKIILAGLRSRSSKCNHSSRFSCSRMISALAPVARIGICSDFIFEELASDFSSGS 184
Query: 190 LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249
+ED VL SL+LLIEGKA+G++S NFL L+G+PSF+E PGCL HPN+AP+LG+LKTS
Sbjct: 185 VEDHVLCSLSLLIEGKATGRDSINFLNLVGIPSFNEDIFPGCLMHPNIAPILGMLKTSDY 244
Query: 250 ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
+ V+PK PYTLENIL +SPNAL SEWH++FL+YQLLSA+AY+H LG+ H ++CPSNV+L
Sbjct: 245 VNLVLPKAPYTLENILHYSPNALNSEWHMKFLIYQLLSALAYIHGLGVTHGNICPSNVML 304
Query: 310 TDSCWSWLYICDKPLVGFN--SIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWH 367
TDSCWSWL ICD P + N S + C I +S +GC I GC SQ LYADLKLS S+DWH
Sbjct: 305 TDSCWSWLRICDNPWLRSNLSSGNEECAIISSSRLGCFIAGCPSQDLYADLKLSPSIDWH 364
Query: 368 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSK 427
F+RWWRG+LSNFEYLL LN+LAGRRWGD+TFH VMPWVIDFS KPDEN D G RDLSK
Sbjct: 365 LNFDRWWRGDLSNFEYLLILNRLAGRRWGDHTFHTVMPWVIDFSIKPDENVDEGWRDLSK 424
Query: 428 SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNE 487
SKWRLAKGDEQLDFTYS+SEIPHHVS+ECLSELAVCSYKARRLPLSVLR AVRSVYEPNE
Sbjct: 425 SKWRLAKGDEQLDFTYSTSEIPHHVSEECLSELAVCSYKARRLPLSVLRLAVRSVYEPNE 484
Query: 488 YPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESD 547
YPS MQRLYQWTPDECIPEFYCDPQIF S H GM DLAVP WA SPEEFIK+HRDALESD
Sbjct: 485 YPSNMQRLYQWTPDECIPEFYCDPQIFRSLHSGMADLAVPSWARSPEEFIKVHRDALESD 544
Query: 548 RVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATW 607
RVS +IHHWIDITFGYKMSGQAA+ AKNVMLPS+EP P+SVGR QLFTQPHP RQ ATW
Sbjct: 545 RVSCQIHHWIDITFGYKMSGQAALAAKNVMLPSTEPMMPRSVGRRQLFTQPHPTRQCATW 604
Query: 608 EKGSRKCKFVRSQ-NNNEVDNVSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESFG 666
+ G+ K Q +E+ LLP+ YLQ+LEEA AFS+HA HLSP Y H ++
Sbjct: 605 KTGNSTNKLAVHQCQGSELVGEKPLLPQTVYLQDLEEAAAFSEHAWHLSPLYCYHPKNLA 664
Query: 667 MYISPTKEFSSESFVGTISNPFENGSRH-VLSDIDLEYLLEHLEVEDEGSMEYQELLLWR 725
+S +E SES IS E G+++ V S+IDL YLL+++EV+DEGS+ YQELLLWR
Sbjct: 665 DDVSSVEEPPSESSKKGISKTPELGNKNGVPSEIDLNYLLDYIEVDDEGSVGYQELLLWR 724
Query: 726 QKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTR 785
QKS SK S+D +KDIFS+GC+LAELHLRRPLFDS SLA+YLENG LPG+++ELP HT+
Sbjct: 725 QKSYCSKALSEDVAKDIFSVGCILAELHLRRPLFDSTSLAMYLENGILPGLIQELPPHTK 784
Query: 786 ILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLG 845
LVEACI KDW RRPSAKSL ESPYF +TV+SSYLFVAPLQL+A+ GS L+YAANFAK G
Sbjct: 785 ALVEACILKDWRRRPSAKSLFESPYFLTTVRSSYLFVAPLQLLAKDGSHLRYAANFAKQG 844
Query: 846 ALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKI 905
ALKAM +F AE CAPYCLPLV PLSD EAE AY+LLKEF+KCL KAV++++LPAIQKI
Sbjct: 845 ALKAMRAFGAEMCAPYCLPLVVAPLSDTEAEWAYILLKEFLKCLKSKAVKSLVLPAIQKI 904
Query: 906 LQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAASVLLI 965
LQ + YSHLKVSLLQDSFVRE+WNR+GKQ YLEMVHPLVISNL+ APHKSSASAASVLLI
Sbjct: 905 LQAS-YSHLKVSLLQDSFVREVWNRVGKQTYLEMVHPLVISNLFVAPHKSSASAASVLLI 963
Query: 966 GSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVAR 1025
G SEELGVPITVHQT+LPLI CFG+G+C DGIDV+VRIGGL GE FI R +LPLLK+V R
Sbjct: 964 GFSEELGVPITVHQTVLPLIHCFGKGLCTDGIDVLVRIGGLFGENFIARHILPLLKNVVR 1023
Query: 1026 SSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHT 1085
IDVS+ NKPEP+QSWSAL+LIDCLM +GLV LP+E VVKEL ED+S +HVMVLM
Sbjct: 1024 YCIDVSSMNKPEPMQSWSALALIDCLMAFEGLVTVLPKEAVVKELTEDQSFVHVMVLMQA 1083
Query: 1086 NLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKV 1145
NLEI VLQVAA+ L+A+CQRIGPDLTA HVLP LKELFDELAFSQE ++ SGSLG +LK
Sbjct: 1084 NLEIPVLQVAANYLIALCQRIGPDLTAFHVLPKLKELFDELAFSQETANGSGSLGRALKF 1143
Query: 1146 PKPKVD 1151
K K +
Sbjct: 1144 SKSKYN 1149
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357128121|ref|XP_003565724.1| PREDICTED: uncharacterized protein LOC100837771 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 1575 bits (4077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 818/1568 (52%), Positives = 1061/1568 (67%), Gaps = 83/1568 (5%)
Query: 21 FCFECLHRRIKSDFSDQ-LIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRS 79
C ECL RR++SD + L F + IS+SPLPFASSAVVQ+ + +E SQ
Sbjct: 1 MCPECLERRVRSDLAGSGLSFVHVISDSPLPFASSAVVQIASDGAEERNWSQ-------- 52
Query: 80 LENDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATSTDSLRDESRCLANGGGEKSK 139
K D +V NGG + + + TD R E + ++ G E ++
Sbjct: 53 -------KTYDFVLVALNGGKTFVDTKKCEKTPLEQPIIYTDDNRCEVQTDSSSGIEYTE 105
Query: 140 D-RIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSL 198
D + Y + + + +T L P+ + G S S EL +++++ +E+ V+ SL
Sbjct: 106 DFQNSYSS-----NNQLLIVNTVTKLIPVYYSGRISISEIRELIASYMNLKVEENVISSL 160
Query: 199 NLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTP 258
NLL E K SG +FL +G +FD+ GC+RHPN+ PVLG++++S + PK P
Sbjct: 161 NLLCENKISGSAGLDFLNFVGFSAFDDLHPSGCVRHPNILPVLGVVESSDCCYMLHPKAP 220
Query: 259 YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318
YTLENI+ +SP AL S+WH+RFLMYQ++SA+AYLH G+ H ++ PS +L++DS W +L
Sbjct: 221 YTLENIMHYSPKALCSDWHIRFLMYQIISALAYLHDSGVHHGNLKPSTILMSDSLWPYLS 280
Query: 319 ICDKPLV----GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWW 374
I D V GF ++P C E CSS+ ++ L S+DW S F RWW
Sbjct: 281 ISDIYHVRQNWGFERPKG-----STPSSCCVAEDCSSRPIHTSFDLLSSLDWSSHFKRWW 335
Query: 375 RGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAK 434
GELSN+EYLL LNKLAGRRWGD FH VMPWVIDF+ +PDEN D G RDL+KSKWRLAK
Sbjct: 336 AGELSNYEYLLVLNKLAGRRWGDPAFHPVMPWVIDFTVRPDENSDIGWRDLTKSKWRLAK 395
Query: 435 GDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQR 494
GDEQLDFTYSSSE+PHHVSDECLSELAVCSYKARRL ++LR+AVRSVYEPNEYPS+MQR
Sbjct: 396 GDEQLDFTYSSSEVPHHVSDECLSELAVCSYKARRLSKTILRSAVRSVYEPNEYPSSMQR 455
Query: 495 LYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIH 554
LYQWTPDECIP+FY DP+IF S H M+DLA+P W S EEFI LHRDALESDRVS ++H
Sbjct: 456 LYQWTPDECIPDFYSDPRIFVSLHSEMSDLALPSWVTSSEEFICLHRDALESDRVSQQLH 515
Query: 555 HWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT----WEKG 610
HWIDITFGYK+ G+A+++AKNVMLP S+P++PKS+GR QLFT PHP R +T +
Sbjct: 516 HWIDITFGYKLDGEASVEAKNVMLPPSDPSRPKSIGRRQLFTTPHPKRHISTPHPSYHNK 575
Query: 611 SRKCKFVRSQNNNEVDNVSS-------LLPEAAYLQELEEAFAFSDHARHLSPRYYNHQE 663
C +++ +N +V+S +L + YL+E E+A F + HL P+Y N+ +
Sbjct: 576 VESCARCQAKGSNSTTDVASNGFIPPDMLSQVDYLEEFEQATIFMELEHHLDPKY-NYTD 634
Query: 664 SFGMYISPTKEFSSESFVGTISNPFENGSRHVLS---DIDLEYLLEHLEVEDEGSMEYQE 720
+ Y S K S IS+ S VLS D D LE E ++ M YQE
Sbjct: 635 TSSCYCSSVKYPKSH-----ISDQEMLQSDTVLSVVPDFDFGSYLECFECDNSSPMGYQE 689
Query: 721 LLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEEL 780
LL W+QKS + + + DIFSIGC+LAE++LRRPLFD+ LA Y E G LPG + EL
Sbjct: 690 LLPWKQKSC---SVIEHHANDIFSIGCMLAEIYLRRPLFDASLLAAYRETGMLPGALNEL 746
Query: 781 PSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAAN 840
P H +LVE+CI ++W RRPS+K LL+SPYFP +V+++Y+F+APLQL+ G RL+Y A
Sbjct: 747 PVHVGVLVESCIQREWKRRPSSKHLLDSPYFPPSVQAAYMFLAPLQLLCTSGDRLKYVAK 806
Query: 841 FAKLGALKAMGSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILP 900
A G LKAMG F+AE CAPYCLP V++ LSD + E LLKEF+KCLS +A + +IL
Sbjct: 807 LASEGTLKAMGEFSAEMCAPYCLPFVSSSLSDVDTESGLCLLKEFLKCLSVQATKQLILH 866
Query: 901 AIQKILQTTGYSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKSSASAA 960
IQKILQ YSHLKVSLLQDSFVRE+W ++GKQ Y+E VHPLVI+NL +P+K ASAA
Sbjct: 867 IIQKILQAPEYSHLKVSLLQDSFVRELWKKLGKQTYIENVHPLVIANLCNSPNKIIASAA 926
Query: 961 SVLLIGSSEELGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLL 1020
S++LIGSSEELG+PIT+HQTILPLI FG+G+C DGI+ +VRIGGLLGE+F V+Q+LPLL
Sbjct: 927 SIVLIGSSEELGIPITIHQTILPLIHYFGKGLCADGIETLVRIGGLLGESFTVKQILPLL 986
Query: 1021 KHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVM 1080
++V S ID S KPEP SW++ +LID L L+GLV+ LP + V+KEL++D+ CLH+
Sbjct: 987 RNVILSCIDSSKVIKPEPQHSWNSFALIDGLSALEGLVSVLPVKAVLKELLQDQVCLHIK 1046
Query: 1081 VLMHTNLEITVLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLG 1140
VLM +L++ V+QVAA+ L+ +C RIGPD TA++VLPHLKELF ELAF E S S
Sbjct: 1047 VLMLIHLDLRVIQVAATALVDLCLRIGPDNTAIYVLPHLKELFAELAFYHESSAVSLPSE 1106
Query: 1141 GSLKVPKPKVDGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWK 1200
G LK+ K ++ESR+DL+ LLYP AS +GIEKLR+CC+TW LLEQ L R +NWK
Sbjct: 1107 G-LKISKGNKSEPIKMESRIDLMFLLYPFLASYVGIEKLRECCSTWFLLEQSLQRLYNWK 1165
Query: 1201 ----WEYTGESSRISEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNL 1256
W T EN+ R S+ P +LL NG G S+ QS+ +++ N+
Sbjct: 1166 PFSEWSKTA-------ENMKDPRSQSGNCIPSEVFPTELLFNGAGLSVSQSEITKTGWNV 1218
Query: 1257 IPQRRVYDYHKSSVERQEATSNLMKC----EPWFWFPTPAASWDGPDFLGRVGGLKDESP 1312
R+ S +E ++ NL +PWFWFP+P +SW PDFLGR GLKDE
Sbjct: 1219 AVSRQ-----GSRLEHGTSSDNLCSSTSGNQPWFWFPSPDSSWGTPDFLGRSSGLKDEFQ 1273
Query: 1313 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH 1372
WKIKAS+L S RAH GALRS+AV DECTVFT G+GPGF G++Q+W+L +NC SGYYGH
Sbjct: 1274 WKIKASVLYSARAHPGALRSLAVHDDECTVFTGGVGPGFTGSIQRWQLPNMNCTSGYYGH 1333
Query: 1373 EEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432
EEVVN IC+LS++G++ASCDGT+HVWN QTGKL++ E S S + + +
Sbjct: 1334 EEVVNSICILSTTGKVASCDGTIHVWNGQTGKLIAAHTESST--------SFPLQTASVE 1385
Query: 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWR 1492
Q MLN + LS GILS AF G+LYT +H++ ++LV G+GNGS+RFIDI+Q +KLHLW+
Sbjct: 1386 QANMLNQDALSGGILSNAFRGSLYTTMHYMSSEDKLVAGMGNGSIRFIDISQDRKLHLWK 1445
Query: 1493 GEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552
+ E+ F SLVSAIC+CGS+K + G V S SWIAAGLSSG CRL D RSG +IA WRA
Sbjct: 1446 SDSAEISFSSLVSAICSCGSDKPRTGRLVDSSSWIAAGLSSGYCRLLDERSGKIIAVWRA 1505
Query: 1553 HDGYVTKV 1560
HDG++TK+
Sbjct: 1506 HDGHITKL 1513
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1566 | ||||||
| TAIR|locus:1006230455 | 1639 | AT5G18525 [Arabidopsis thalian | 0.887 | 0.848 | 0.601 | 0.0 | |
| DICTYBASE|DDB_G0268088 | 2179 | lvsG "BEACH domain-containing | 0.129 | 0.093 | 0.444 | 1.2e-85 | |
| UNIPROTKB|Q562E7 | 1941 | WDR81 "WD repeat-containing pr | 0.228 | 0.184 | 0.405 | 1.1e-73 | |
| UNIPROTKB|E2R4W6 | 1933 | WDR81 "Uncharacterized protein | 0.230 | 0.186 | 0.409 | 7.7e-73 | |
| MGI|MGI:2681828 | 1934 | Wdr81 "WD repeat domain 81" [M | 0.231 | 0.187 | 0.411 | 1.9e-72 | |
| RGD|1311334 | 1933 | Wdr81 "WD repeat domain 81" [R | 0.229 | 0.186 | 0.408 | 7.5e-70 | |
| FB|FBgn0032395 | 1953 | CG6734 [Drosophila melanogaste | 0.146 | 0.117 | 0.486 | 5.9e-54 | |
| UNIPROTKB|F1RW14 | 3527 | WDFY3 "Uncharacterized protein | 0.063 | 0.028 | 0.379 | 3.6e-21 | |
| UNIPROTKB|E2RLD7 | 3509 | WDFY3 "Uncharacterized protein | 0.063 | 0.028 | 0.379 | 5.2e-21 | |
| UNIPROTKB|J9PB38 | 3512 | WDFY3 "Uncharacterized protein | 0.063 | 0.028 | 0.379 | 5.2e-21 |
| TAIR|locus:1006230455 AT5G18525 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4269 (1507.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 864/1436 (60%), Positives = 1064/1436 (74%)
Query: 22 CFECLHRRIKSDFSDQLIFSYGISNSPLPFASSAVVQMNNSSSENLLASQFILVYCRSLE 81
CF+CL +RI SDFSDQ++FSYG+S+SPLPF SSAVV++++SS E AS C S E
Sbjct: 9 CFDCLDQRINSDFSDQIVFSYGVSDSPLPFGSSAVVKVSDSSEE-FSAS------CSSCE 61
Query: 82 NDCLTKYVDEYVVDNNGGSDSQVEENDIVGSISEQATSTDSLRDESRCL--ANGGGEKSK 139
+ ++++ EY+ + G ++ + +V + S D++ + CL + G + ++
Sbjct: 62 STS-SQFILEYLRKDEHGCLAKYVDKFVVKD--REGNSNDAVESDE-CLDCSTSGSQATE 117
Query: 140 D----RIEYGTWICNHSGRFSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVL 195
D I G+ C HSG FSC R + AL PIA I CS S ++LAS+F C ED +L
Sbjct: 118 DDDTENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCSASELQKLASSFHYECPEDQIL 177
Query: 196 GSLNLLIEGKASGQESKNFL-RLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVI 254
SL+ LI+GK+SGQ + +FL L+G+P +E S CLRHPN++PVLGLL +S + SV+
Sbjct: 178 ASLHRLIDGKSSGQATHSFLCLLLGLPLLEEKSKLRCLRHPNLSPVLGLLTSSDCLVSVL 237
Query: 255 PKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314
PK PYTLENIL +SP+A+KSEWH F++YQLLSA+A+LH L ++H + PSN+LL+DS W
Sbjct: 238 PKAPYTLENILYYSPSAIKSEWHRNFIIYQLLSALAHLHGLKVSHGDIRPSNILLSDSLW 297
Query: 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWW 374
SWL I KP +G S+ D ++ C+EGC S GLYADLK+S +DW + F++WW
Sbjct: 298 SWLTIYSKPDLG--SV-D--ANSSASRRRWCVEGCYSYGLYADLKISSHLDWQTHFDKWW 352
Query: 375 RGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAK 434
+GELSNFEYLL LNKLAGRRWGD+TFH VMPWVIDFS KP+ + DSG RDL KSKWRLAK
Sbjct: 353 KGELSNFEYLLVLNKLAGRRWGDHTFHPVMPWVIDFSKKPENDSDSGWRDLRKSKWRLAK 412
Query: 435 GDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQR 494
GDEQLDFTYS+ E PHHVSDECLSELAVCSYKARRLPLSVLR AVRSVYEPNEYPS MQR
Sbjct: 413 GDEQLDFTYSTFEFPHHVSDECLSELAVCSYKARRLPLSVLRKAVRSVYEPNEYPSDMQR 472
Query: 495 LYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIH 554
LY WTPDECIPEFYCDP+IF S HP M+DLAVPPWA SP+EFI+LHRDALES VSS IH
Sbjct: 473 LYDWTPDECIPEFYCDPRIFCSLHPSMSDLAVPPWASSPDEFIRLHRDALESPHVSSLIH 532
Query: 555 HWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKG-SRK 613
HWIDITFGYKMSG AAI AKNVML SSEPT P+SVGR QLF +PHPVR + EK SR
Sbjct: 533 HWIDITFGYKMSGHAAITAKNVMLSSSEPTVPRSVGRRQLFFRPHPVRLGFSREKEQSRN 592
Query: 614 CKFVRSQNNNEVDNVSSLLPEA-AYLQELEEAFAFSDHARHLSPRYYNHQESFGMYISPT 672
+ + + VDN S++ A YL+E EEA AFSDHA HL P+Y+ + + SP
Sbjct: 593 ELEMHTFHGFGVDNKRSVILLADEYLEETEEASAFSDHATHLCPKYHLREN---LVESPL 649
Query: 673 KEFSSESF--VGTISNPFENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSY 730
SE+ V T S P + ++ + S I L YLLEH+EV DE S E QELL WRQ
Sbjct: 650 HVSYSENTKKVNT-SLPGTSKNKGLSSRISLNYLLEHMEVRDEASTELQELLQWRQDFC- 707
Query: 731 SKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEA 790
+ SKD + DIFSIGC+LAEL+L +PLF+S+SLA YLE GDLP +++ELP T+++VEA
Sbjct: 708 TGNISKDIAGDIFSIGCVLAELYLMKPLFNSVSLATYLEGGDLPELIKELPPPTQVIVEA 767
Query: 791 CITKDWTRRPSAKSLLESPYFPSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKAM 850
CI +DW RRPSAKSLL+SPYF +TV+S++LF APLQL+A+ +RL YAA+FAK G LK M
Sbjct: 768 CIEQDWRRRPSAKSLLDSPYFSATVRSAHLFAAPLQLLAKGQTRLCYAASFAKQGVLKVM 827
Query: 851 GSFAAERCAPYCLPLVATPLSDAEAECAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTG 910
G+F AE CA YCLPLV TPLS+ E E AYVLLKEF K L+P AV+ ++LP+IQKIL TTG
Sbjct: 828 GTFVAEMCAVYCLPLVTTPLSEDECELAYVLLKEFTKSLTPMAVQRLVLPSIQKILLTTG 887
Query: 911 YSHLKVSLLQDSFVREIWNRIGKQAYLEMVHPLVISNLYAAPHKXXXXXXXVLLIGSSEE 970
YSHLKVSLLQDSFVRE+WN+IGK+ YLEM+HPLVISNLY +P K VLLIGSSEE
Sbjct: 888 YSHLKVSLLQDSFVRELWNQIGKRVYLEMIHPLVISNLYNSPDKISASAASVLLIGSSEE 947
Query: 971 LGVPITVHQTILPLIQCFGRGICPDGIDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDV 1030
LG P+TVHQTILPLI FG+GIC DGIDV+VRIG LLG FIV+QMLPLL+HV ID+
Sbjct: 948 LGAPVTVHQTILPLISYFGKGICTDGIDVLVRIGRLLGVNFIVKQMLPLLEHVVCFCIDL 1007
Query: 1031 SNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVVKELIEDRSCLHVMVLMHTNLEIT 1090
S+ KPEPV SW +L+L DCL+TLDGLVA + E+++ EL + R CLHV VLM NLE+
Sbjct: 1008 SSMKKPEPVHSWCSLALSDCLITLDGLVALISDELLIHELTKGRLCLHVRVLMQKNLELR 1067
Query: 1091 VLQVAASTLMAICQRIGPDLTALHVLPHLKELFDELAFSQECSDESGSLGGSLKVPKPKV 1150
VLQ AA++LM+ICQRIG ++TALHVLP LKELFDE AFS++ +D S SL ++ + K
Sbjct: 1068 VLQFAATSLMSICQRIGQEMTALHVLPQLKELFDEFAFSEKSTDASDSLSWKIRTAEQKF 1127
Query: 1151 DGESQIESRMDLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTGESSRI 1210
ES I+SRMDLVLLLYPSFASLLG+EKLRQ C TWLLLEQ+LL++HNWKWEYTG SSR
Sbjct: 1128 HPESPIKSRMDLVLLLYPSFASLLGMEKLRQGCPTWLLLEQYLLKHHNWKWEYTGRSSRY 1187
Query: 1211 SEENISAKRPLLNKGSTSQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSV 1270
N+ A RP+L +G S+ P K+LLNG G S+PQSQG R+S +L +++ H V
Sbjct: 1188 ---NMEA-RPVLKQGPASKHTP-KVLLNGSGRSVPQSQGLRNSNHL----KLH-IHVP-V 1236
Query: 1271 ERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGAL 1330
E QEA N + EPW WFP+P WDG D +GR G KDE+ WKI+AS+LSS RAHHGAL
Sbjct: 1237 EGQEAVLNPLVHEPWSWFPSPVTCWDGLD-IGRFGNPKDENRWKIRASVLSSARAHHGAL 1295
Query: 1331 RSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS 1390
RS+ V +DECTVFT+GI PGFKG+VQKWEL ++CVS Y+ HEEVVNDI +LSS+G++AS
Sbjct: 1296 RSLVVSEDECTVFTSGIDPGFKGSVQKWELASLSCVSSYHAHEEVVNDIGILSSTGKVAS 1355
Query: 1391 CDGTLHVWNSQTGKLLSVFAEQXXXXXXXXXXXXXXXKINTDQVGMLNSNTLSSGI 1446
CDGT+HVWNSQTGKL+S+F+E K N++ S+ LSSGI
Sbjct: 1356 CDGTIHVWNSQTGKLISLFSESPSDQDQASSDPSS--KNNSNPCNRHASHGLSSGI 1409
|
|
| DICTYBASE|DDB_G0268088 lvsG "BEACH domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 453 (164.5 bits), Expect = 1.2e-85, Sum P(8) = 1.2e-85
Identities = 97/218 (44%), Positives = 131/218 (60%)
Query: 450 HHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYC 509
HH+SD LSEL SY ARR + +LR VR+ YEPNEYP+TM+RLY+WTPDECIPEF+
Sbjct: 623 HHISD-ILSELTYYSYLARRTSVPLLRRFVRTNYEPNEYPATMERLYRWTPDECIPEFFT 681
Query: 510 DPQIFYSQHPGMTDLAVPPWAG--SPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSG 567
D IF S H M DL +P W S +EFIK+H +ALESD VS ++H WID+TFGY +SG
Sbjct: 682 DSTIFKSIHSDMPDLQLPDWVPNQSTQEFIKIHMNALESDHVSKQLHSWIDLTFGYLLSG 741
Query: 568 QAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTATWEKGSRKCKFVRSQNNNEVDN 627
+ AI AKN+ L + T P++ G +QLF PHP + K + K+ R Q +
Sbjct: 742 EEAIKAKNLAL--MDTTIPRNNGIVQLFNHPHPKK------KYLKSLKYQRQQQTQQHQQ 793
Query: 628 VSSLLPEAAYLQELEEAFAFSDHARHLSPRYYNHQESF 665
+ P+ + E F++ + + NH +F
Sbjct: 794 QTQQQPQF----DTEFTIKFNESSFRYENQNINHNSTF 827
|
|
| UNIPROTKB|Q562E7 WDR81 "WD repeat-containing protein 81" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 660 (237.4 bits), Expect = 1.1e-73, Sum P(5) = 1.1e-73
Identities = 160/395 (40%), Positives = 220/395 (55%)
Query: 229 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 287
P C P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L
Sbjct: 213 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLR 269
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI----CDKPLVGFNSIADWCTIPTSPMIG 343
A+ H G+A ++ ++ + + S L + ++P N A P +
Sbjct: 270 AMDACHRQGLACGALSLYHIAVDEKLCSELRLDLSAYERPEEDENEEA-----PVA-RDE 323
Query: 344 CCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMV 403
I QG Q + S W G +SNF YL+ LN+LAGRR GD +H V
Sbjct: 324 AGIVSQEEQGGQPGQPTGQE-ELRSLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPV 382
Query: 404 MPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------I 448
+PWV+DF+T P F RDL KSK+RL KGD+QLDFTY + +
Sbjct: 383 LPWVVDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGGGEPPHV 437
Query: 449 PHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFY 508
PHH+SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY
Sbjct: 438 PHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFY 496
Query: 509 CDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQ 568
DP IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+
Sbjct: 497 TDPSIFRSIHPDMPDLDVPAWCSSSQEFVAAHRALLESREVSRDLHHWIDLTFGYKLQGK 556
Query: 569 AAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
A+ KNV L + T S G +QLF QPHP R
Sbjct: 557 EAVKEKNVCLHLVDAHTHLASYGVVQLFDQPHPQR 591
|
|
| UNIPROTKB|E2R4W6 WDR81 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 671 (241.3 bits), Expect = 7.7e-73, Sum P(5) = 7.7e-73
Identities = 161/393 (40%), Positives = 220/393 (55%)
Query: 230 GCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLSA 288
G L P++ LL++ ++ V P ++L +++ FSP L S+ V F+++++L A
Sbjct: 211 GSLACPSLLQAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFILFRVLRA 270
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTS---PMIGCC 345
+ H G+A ++ ++ + + S L + D + IP + P G
Sbjct: 271 MDACHRQGLACGALTLHHIAVDEKLCSELRL-DLSAYERPKEDESEEIPVARDGPGSGPG 329
Query: 346 IEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMP 405
EG G S + W G +SNF YL+ LN+LAGRR GD +H V+P
Sbjct: 330 EEGGGRPGCP-----SCQEELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLP 384
Query: 406 WVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSE---------------IPH 450
WV+DF+T P F RDL KSK+RL KGD+QLDFTY + +PH
Sbjct: 385 WVVDFTT-PHGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGTGGGEPPHVPH 439
Query: 451 HVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCD 510
H+SD LS++ YKARR P SVL VR+ +EP+EYP++M+R+ WTPDECIPEFY D
Sbjct: 440 HISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPASMERMQNWTPDECIPEFYTD 498
Query: 511 PQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAA 570
P IF S HP M DL VP W GS +EF+ HR LES VS +HHWID+TFGYK+ G+ A
Sbjct: 499 PSIFCSIHPDMPDLDVPAWCGSSQEFVSAHRALLESPEVSQDLHHWIDLTFGYKLQGKEA 558
Query: 571 IDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
+ KNV L + T S G +QLF QPHP R
Sbjct: 559 VKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 591
|
|
| MGI|MGI:2681828 Wdr81 "WD repeat domain 81" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 659 (237.0 bits), Expect = 1.9e-72, Sum P(5) = 1.9e-72
Identities = 161/391 (41%), Positives = 218/391 (55%)
Query: 229 PGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVRFLMYQLLS 287
P C P++ LL++ ++ V P ++L +++ FSP L S+ V FL++++L
Sbjct: 211 PAC---PSLLRAEALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVLFLLFRVLR 267
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347
A+ H G+A ++ ++ + + S L + D S D + G I+
Sbjct: 268 AMDACHRQGLACGALSLHHIAVDEKLCSELRL-DLSAYEMPS-EDENQEGSEEKNGTGIK 325
Query: 348 GCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWV 407
+ Q + W G +SNF YL+ LN+LAGRR GD +H V+PWV
Sbjct: 326 SEKEGEGRTECPTCQK-ELRGLVLDWVHGRISNFHYLMQLNRLAGRRQGDPNYHPVLPWV 384
Query: 408 IDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYS------------SSE---IPHHV 452
+DF+T P F RDL KSK+RL KGD+QLDFTY S E +PHH+
Sbjct: 385 VDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVAGGAGSGEPPHVPHHI 439
Query: 453 SDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQ 512
SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+ WTPDECIPEFY DP
Sbjct: 440 SD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQTWTPDECIPEFYTDPS 498
Query: 513 IFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAID 572
IF S HP M DL VP W S +EF+ HR LES VS +HHWID+TFGYK+ G+ A+
Sbjct: 499 IFCSIHPDMPDLDVPAWCSSNQEFVAAHRALLESWEVSQDLHHWIDLTFGYKLQGKEAVK 558
Query: 573 AKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
KNV L + T S G +QLF QPHP R
Sbjct: 559 EKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 589
|
|
| RGD|1311334 Wdr81 "WD repeat domain 81" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 645 (232.1 bits), Expect = 7.5e-70, Sum P(5) = 7.5e-70
Identities = 166/406 (40%), Positives = 227/406 (55%)
Query: 221 PSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNAL-KSEWHVR 279
PS S+ P LR LL++ ++ V P ++L +++ FSP L S+ V
Sbjct: 204 PSRGSSACPSLLRAE------ALLESPEMLYVVHPYVQFSLHDVVTFSPAKLTNSQAKVL 257
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI----CDKPLVGFNS-IADWC 334
F+++++L A+ H G+A ++ ++ + + S L + + P N +++
Sbjct: 258 FILFRVLRAMDACHRQGLACGALSLHHIAVDEKLCSELRLDLSAYEMPSEDENQEVSEEK 317
Query: 335 --TIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392
T S G GC + +L+ +DW G +SNF YL+ LN+LAG
Sbjct: 318 DRTGVKSEKDGEGRPGCPT--CQKELR-GLVLDWV-------HGRVSNFYYLMQLNRLAG 367
Query: 393 RRWGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYS-------- 444
RR GD +H V+PWV+DF+T P F RDL KSK+RL KGD+QLDFTY
Sbjct: 368 RRQGDPNYHPVLPWVVDFTT-PYGRF----RDLRKSKFRLNKGDKQLDFTYEMTRQAFVA 422
Query: 445 ----SSE---IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQ 497
S E +PHH+SD LS++ YKARR P SVL VR+ +EP+EYP+TM+R+
Sbjct: 423 GGAGSGEPLHVPHHISD-VLSDITYYVYKARRTPRSVLCGHVRAQWEPHEYPATMERMQT 481
Query: 498 WTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWI 557
WTPDECIPEFY DP IF S HP M DL VP W S +EF+ HR LES VS +HHWI
Sbjct: 482 WTPDECIPEFYTDPSIFCSIHPDMPDLDVPAWCSSNQEFVTAHRALLESWEVSQDLHHWI 541
Query: 558 DITFGYKMSGQAAIDAKNVMLPSSEP-TKPKSVGRLQLFTQPHPVR 602
D+TFGYK+ G+ A+ KNV L + T S G +QLF QPHP R
Sbjct: 542 DLTFGYKLQGKEAVKEKNVCLHLVDAHTHLTSYGVVQLFDQPHPQR 587
|
|
| FB|FBgn0032395 CG6734 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 576 (207.8 bits), Expect = 5.9e-54, Sum P(4) = 5.9e-54
Identities = 123/253 (48%), Positives = 156/253 (61%)
Query: 373 WWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS-RDLSKSKWR 431
W G+LSNF+YL LN GR + +H +MPWV DFS + G+ RDL+KSK+R
Sbjct: 348 WCNGQLSNFDYLTILNNACGRSLTNAAYHHIMPWVTDFSGR-----GGGAWRDLTKSKYR 402
Query: 432 LAKGDEQLDFTYSSS---------------EIPHHVSDECLSELAVCSYKARRLPLSVLR 476
L KGD LD Y+ + + PHHVSD LSE+ Y ARR P S+L
Sbjct: 403 LNKGDVHLDLMYAHASQHGSADGSYQAIGDQAPHHVSD-FLSEITYFVYMARRTPQSILC 461
Query: 477 TAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHPGMTDLAVPPWAGSPEEF 536
VR ++ P EYP ++QRL +WTPDECIPEFY DP IF S H + DL +P WA PE+F
Sbjct: 462 AHVRPIWVPAEYPVSIQRLQEWTPDECIPEFYSDPMIFKSIHEDLPDLELPAWATCPEDF 521
Query: 537 IKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSV-GRLQLF 595
I HR+ALES VS R+HHWID+ FGYK+SG+AA+ +KNV L + + S G +QLF
Sbjct: 522 ICKHREALESQYVSERLHHWIDLNFGYKLSGKAAVKSKNVCLTLVDQHRNLSQRGIVQLF 581
Query: 596 TQPHPVRQTAT-W 607
HP R+ AT W
Sbjct: 582 ASAHPPRRYATPW 594
|
|
| UNIPROTKB|F1RW14 WDFY3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 193 (73.0 bits), Expect = 3.6e-21, Sum P(4) = 3.6e-21
Identities = 44/116 (37%), Positives = 67/116 (57%)
Query: 502 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 550
E IPEF+ P+ ++ + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2846 ELIPEFFYLPEFLFNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDYVS 2905
Query: 551 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 606
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2906 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2955
|
|
| UNIPROTKB|E2RLD7 WDFY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 193 (73.0 bits), Expect = 5.2e-21, Sum P(5) = 5.2e-21
Identities = 44/116 (37%), Positives = 67/116 (57%)
Query: 502 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 550
E IPEF+ P+ ++ + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2828 ELIPEFFYLPEFLFNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDYVS 2887
Query: 551 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 606
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2888 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2937
|
|
| UNIPROTKB|J9PB38 WDFY3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 193 (73.0 bits), Expect = 5.2e-21, Sum P(5) = 5.2e-21
Identities = 44/116 (37%), Positives = 67/116 (57%)
Query: 502 ECIPEFYCDPQIFYSQHP---G-------MTDLAVPPWA-GSPEEFIKLHRDALESDRVS 550
E IPEF+ P+ ++ + G + D+ +PPWA G P EFI++HR+ALE D VS
Sbjct: 2831 ELIPEFFYLPEFLFNSNNFDLGCKQNGTKLGDVILPPWAKGDPREFIRVHREALECDYVS 2890
Query: 551 SRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKPKSVGRLQLFTQPHPVRQTAT 606
+ +H WID+ FGYK G AA++A NV G++ ++ P+++TAT
Sbjct: 2891 AHLHEWIDLIFGYKQQGPAAVEAVNVFHHLFYE------GQVDIYNINDPLKETAT 2940
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.7.11 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1566 | |||
| cd06071 | 275 | cd06071, Beach, BEACH (Beige and Chediak-Higashi) | 4e-82 | |
| smart01026 | 280 | smart01026, Beach, Beige/BEACH domain | 2e-77 | |
| pfam02138 | 274 | pfam02138, Beach, Beige/BEACH domain | 8e-71 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-11 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 1e-11 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 8e-11 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 2e-09 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-09 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 4e-09 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 5e-09 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-08 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-08 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 3e-08 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-07 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 2e-07 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-07 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 6e-07 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-06 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 1e-06 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 1e-06 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 1e-06 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 1e-06 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 3e-06 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-06 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-06 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 4e-06 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 4e-06 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 7e-06 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 8e-06 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 1e-05 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 3e-05 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 4e-05 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 4e-05 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 4e-05 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-05 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-05 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 7e-05 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 7e-05 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 1e-04 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 1e-04 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 1e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 1e-04 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 1e-04 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-04 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 1e-04 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 2e-04 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 3e-04 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 3e-04 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 3e-04 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 4e-04 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 4e-04 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 4e-04 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 4e-04 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 4e-04 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 5e-04 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 5e-04 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 6e-04 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 7e-04 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 8e-04 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 8e-04 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 0.001 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 0.001 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 0.001 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 0.001 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 0.001 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 0.001 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 0.001 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 0.001 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 0.001 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 0.002 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 0.002 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 0.002 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 0.003 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 0.003 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 0.003 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 0.004 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 0.004 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 0.004 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 0.004 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 0.004 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.004 |
| >gnl|CDD|100117 cd06071, Beach, BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes | Back alignment and domain information |
|---|
Score = 270 bits (693), Expect = 4e-82
Identities = 94/278 (33%), Positives = 129/278 (46%), Gaps = 50/278 (17%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFSTKPDENFDSGS--RDLSKS 428
+W GE+SNFEYL++LN LAGR + D + + + PWVI T + + + S RDLSK
Sbjct: 2 KKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKP 61
Query: 429 KWRLAKGDEQLDFTYSSSEI---------PHHVSDECLSELAVCSYKARRLP-----LSV 474
L K QL S+ H S+ + V Y R P LS+
Sbjct: 62 IGALNKERLQLLKERYESDSDDSDPPFHYGSHYSNPAI----VLYYLVRLEPFTTLHLSL 117
Query: 475 LRTAVRS-VYEPNEYPSTMQRLYQ--WTPDECIPEFYCDPQIFYSQHP---------GMT 522
+ N PS+ + + E IPEFY P+ F + + +
Sbjct: 118 QGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFFLNINKFDFGKQDGEKVN 177
Query: 523 DLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 582
D+ +PPWA SPEEFI+ HR+ALES+ VS +HHWID+ FGYK G+ A+ AKNV P +
Sbjct: 178 DVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTY 237
Query: 583 P------------------TKPKSVGRLQLFTQPHPVR 602
+QLFT+PHP R
Sbjct: 238 EGSVDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275
|
This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins. Length = 275 |
| >gnl|CDD|214982 smart01026, Beach, Beige/BEACH domain | Back alignment and domain information |
|---|
Score = 257 bits (658), Expect = 2e-77
Identities = 94/287 (32%), Positives = 129/287 (44%), Gaps = 63/287 (21%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSKS 428
+W GE+SNFEYL+ LN LAGR + D T + V PWV+ D++++ D + S RDLSK
Sbjct: 2 QKWQNGEISNFEYLMHLNTLAGRSYNDLTQYPVFPWVLADYTSETLDLSNPSTFRDLSK- 60
Query: 429 KWRLAKGDEQLDFTYS-------SSEIPHHVSDECLSELAVCSYKARRLPL--------- 472
A E+L+F Y P H S V Y R P
Sbjct: 61 PIG-ALNPERLEFFYERYEELEDPDIPPFHYGTHYSSAGIVLYYLIRLEPFTTLFLQLQG 119
Query: 473 ------SVLRTAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDPQIFYSQHP------- 519
L +V + + +M + E IPEF+ P+ + +
Sbjct: 120 GRFDHADRLFHSVAATWRSA-SLESMTDVK-----ELIPEFFYLPEFLVNINGFDFGTRQ 173
Query: 520 ---GMTDLAVPPWA-GSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKN 575
+ D+ +PPWA GSPEEFI+ HR+ALES+ VS +HHWID+ FGYK G+ A++A N
Sbjct: 174 DGEDVDDVELPPWAKGSPEEFIRKHREALESEYVSQHLHHWIDLIFGYKQRGKEAVEALN 233
Query: 576 VMLP----------SSEPTKPKSVGR----------LQLFTQPHPVR 602
V P S E + QLF +PHP R
Sbjct: 234 VFHPLTYEGAVDLDSIEDPVERKALEGQIHNFGQTPKQLFKEPHPPR 280
|
The BEACH domain was described in the BEIGE protein (D1035670) and in the highly homologous CHS protein. The BEACH domain is usually followed by a series of WD repeats. The function of the BEACH domain is unknown. Length = 280 |
| >gnl|CDD|216896 pfam02138, Beach, Beige/BEACH domain | Back alignment and domain information |
|---|
Score = 238 bits (609), Expect = 8e-71
Identities = 91/274 (33%), Positives = 135/274 (49%), Gaps = 43/274 (15%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTKP-DENFDSGSRDLSK- 427
+W GE+SNFEYL+ LN LAGR + D + + V PWV+ D++++ D N S RDLSK
Sbjct: 2 EKWQNGEISNFEYLMLLNTLAGRSFNDLSQYPVFPWVLADYTSETLDLNDPSTYRDLSKP 61
Query: 428 ----SKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY 483
++ RL K E+ + P H S +V Y R P + L ++
Sbjct: 62 IGALNEERLKKFKERYEE-LDEVGPPFHYGSHYSSPGSVLHYLIRLEPFTTLHIELQGGK 120
Query: 484 --EPNEYPSTMQRLYQWTPD------ECIPEFYCDPQIFYSQHP---------GMTDLAV 526
+ S+++ ++ + E IPEF+ P+ + + + D+ +
Sbjct: 121 FDHADRLFSSIEEAWKSVSESMNDVKELIPEFFYLPEFLKNINNFDLGKRDGEKVDDVEL 180
Query: 527 PPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP 586
PPWA SPEEF+ +R ALESD VS +H+WID+ FGYK G+ AI+AKNV P +
Sbjct: 181 PPWAKSPEEFVYKNRKALESDYVSENLHNWIDLIFGYKQRGEEAIEAKNVFHPLTYEDIV 240
Query: 587 ----------------KSVGRL--QLFTQPHPVR 602
+ G+ QLFT+PHP R
Sbjct: 241 DKIKDPVEREAIEAQISNFGQTPKQLFTEPHPKR 274
|
Length = 274 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 1e-11
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
L HPN+ + G+ + + V+ +L+++L+ + L SE + ++ Q+L +
Sbjct: 48 LNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKL-SEDEILRILLQILEGLE 106
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
YLHS GI HR + P N+LL + + D
Sbjct: 107 YLHSNGIIHRDLKPENILLDSDNGK-VKLAD 136
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 1e-11
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 27/105 (25%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPYT--------------LENILQFSPNALKSEW 276
LRH N+ GL+ + P +P L +++ SP L ++
Sbjct: 55 HLRHENII---------GLLDILRPPSPEDFNDVYIVTELMETDLHKVIK-SPQPL-TDD 103
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
H+++ +YQ+L + YLHS + HR + PSN+L+ +C L ICD
Sbjct: 104 HIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DLKICD 146
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 8e-11
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
LRH N+ + + G + V TL +L+ SP L + VR ++QLL AIAY
Sbjct: 57 LRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPD-AVRSYIWQLLQAIAY 115
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
HS I HR + P N+L+++S L +CD
Sbjct: 116 CHSHNIIHRDIKPENILVSES--GVLKLCD 143
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 2e-09
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
SE RF + Q+LSA+ YLHS GI HR + P N+LL +
Sbjct: 95 SEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDG 134
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 4e-09
Identities = 45/266 (16%), Positives = 91/266 (34%), Gaps = 61/266 (22%)
Query: 1323 IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVL 1382
++ H G + VA D + T GT++ W+L + GH V D+
Sbjct: 5 LKGHTGGVTCVAFSPDGKLLATGSGD----GTIKVWDLETGELLRTLKGHTGPVRDVAAS 60
Query: 1383 SSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440
+ +AS D T+ +W+ +TG+ + H SS++ ++
Sbjct: 61 ADGTYLASGSSDKTIRLWDLETGECVRTLTG------HTSYV-SSVAFSPDGRI------ 107
Query: 1441 TLSSGILSTAFDGN-----------LYTCLHH---IECV------ERLVVGIGNGSLRFI 1480
+ S++ D L T H + V + +G+++
Sbjct: 108 -----LSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLW 162
Query: 1481 DINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540
D+ G+ + T G V+++ + + + S G +L+D
Sbjct: 163 DLRTGKCVA------TLTGHTGEVNSVAFSPDGEK-----------LLSSSSDGTIKLWD 205
Query: 1541 VRSGNVIASWRAHDGYVTKVRIISKR 1566
+ +G + + R H+ V V
Sbjct: 206 LSTGKCLGTLRGHENGVNSVAFSPDG 231
|
Length = 289 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 59.5 bits (145), Expect = 4e-09
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 8/51 (15%)
Query: 263 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
NIL+ + H R++MYQLL A+ Y+HS + HR + PSN+LL C
Sbjct: 102 NILE--------DVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC 144
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 5e-09
Identities = 46/255 (18%), Positives = 95/255 (37%), Gaps = 68/255 (26%)
Query: 1313 WKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG 1371
W ++ + ++ H + SVA D + ++ T++ W++ C++ G
Sbjct: 78 WDLETGECVRTLTGHTSYVSSVAFSPD-GRILSSS---SRDKTIKVWDVETGKCLTTLRG 133
Query: 1372 HEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429
H + VN + +AS DGT+ +W+ +TGK ++ + H
Sbjct: 134 HTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATL------TGH----------- 176
Query: 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLH 1489
+ + S AF + E+L+ +G+++ D++ G+ L
Sbjct: 177 -------------TGEVNSVAFSPDG----------EKLLSSSSDGTIKLWDLSTGKCLG 213
Query: 1490 LWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS--WIAAGLSSGQCRLFDVRSGNVI 1547
RG + + + SP +A+G G R++D+R+G +
Sbjct: 214 TLRGHE---------NGVNSV----------AFSPDGYLLASGSEDGTIRVWDLRTGECV 254
Query: 1548 ASWRAHDGYVTKVRI 1562
+ H VT +
Sbjct: 255 QTLSGHTNSVTSLAW 269
|
Length = 289 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-08
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
L HPN+ +L + + G + V L +++ L E ++ +YQLL +A
Sbjct: 54 ELNHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQRGL-PESLIKSYLYQLLQGLA 112
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ HS GI HR + P N+L+ L + D
Sbjct: 113 FCHSHGILHRDLKPENLLINTEG--VLKLAD 141
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 3e-08
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
SE + + Q+L + YLHS GI HR + P N+LL
Sbjct: 96 SEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILL 131
|
Length = 260 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.8 bits (138), Expect = 3e-08
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 232 LRHPNVAPVLGLL--KTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 289
LRHPN+ + ++ K G I V + L +L SP +E ++ M QLL +
Sbjct: 55 LRHPNIVRLKEIVTSKGKGSIYMVFEYMDHDLTGLLD-SPEVKFTESQIKCYMKQLLEGL 113
Query: 290 AYLHSLGIAHRSVCPSNVLLTD 311
YLHS GI HR + SN+L+ +
Sbjct: 114 QYLHSNGILHRDIKGSNILINN 135
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 55.9 bits (133), Expect = 1e-07
Identities = 50/249 (20%), Positives = 97/249 (38%), Gaps = 23/249 (9%)
Query: 1313 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH 1372
++ ++ H ++ S+A D + + GT++ W+L +S GH
Sbjct: 141 LSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGS---SLDGTIKLWDLRTGKPLSTLAGH 197
Query: 1373 EEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLL-SVFAEQSMDSLHGGSPSSS--I 1426
+ V+ + G + S DGT+ +W+ TGKLL S + S + SP S
Sbjct: 198 TDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLA 257
Query: 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ 1486
S + + + + + SS + + + + + + L G +G++R D+ G+
Sbjct: 258 SGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGK 317
Query: 1487 KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV 1546
L T G VS++ ++ G G RL+D+R+G
Sbjct: 318 LLSSL----TLKGHEGPVSSLSFSPDGS----------LLVSGGSDDGTIRLWDLRTGKP 363
Query: 1547 IASWRAHDG 1555
+ + H
Sbjct: 364 LKTLEGHSN 372
|
Length = 466 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 2e-07
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 232 LRHPNVAPVLGLLKTSGL----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLS 287
+H N+ + +L+ G + V+ L +I+ S L +E H+R+ +YQLL
Sbjct: 61 FKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHII-HSDQPL-TEEHIRYFLYQLLR 118
Query: 288 AIAYLHSLGIAHRSVCPSNVLLTDSC 313
+ Y+HS + HR + PSN+L+ + C
Sbjct: 119 GLKYIHSANVIHRDLKPSNLLVNEDC 144
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 54.0 bits (131), Expect = 2e-07
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L+HPN+ +L ++ T + V L+ L P L S ++ +MYQLL +AY
Sbjct: 55 LKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPL-SPNLIKSIMYQLLRGLAY 113
Query: 292 LHSLGIAHRSVCPSNVLLTDS 312
HS I HR + P N+L+
Sbjct: 114 CHSHRILHRDLKPQNILINRD 134
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 6e-07
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 268 SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
S L + H ++ +YQLL + Y+HS + HR + PSN+LL +C L ICD
Sbjct: 101 SSQTLSDD-HCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC--DLKICD 151
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLAVYL------ENGDLPGVMEELPSHTRILVEACITK 794
DI+S+G +L EL +P F + L P ++ + L+ + K
Sbjct: 178 DIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVK 237
Query: 795 DWTRRPSAKSLLESPYF 811
D +R +A+ L+ P+F
Sbjct: 238 DPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 1e-06
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
S+ H++FL+YQ+L + Y+HS GI HR + PSN+ + + C
Sbjct: 116 SDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311
SE RF +++ A+ YLHSLGI +R + P N+LL
Sbjct: 91 SEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA 128
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 1e-06
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 15/98 (15%)
Query: 232 LRHPNVAPVLGLLKTSGL--------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 283
+H NV L +L+ + +T ++ L I+ SP L S+ HV+ +Y
Sbjct: 56 FKHDNVLSALDILQPPHIDPFEEIYVVTELMQSD---LHKII-VSPQPLSSD-HVKVFLY 110
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
Q+L + YLHS GI HR + P N+L+ +C L ICD
Sbjct: 111 QILRGLKYLHSAGILHRDIKPGNLLVNSNC--VLKICD 146
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 261 LENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
L NI++ L E HV+FL+YQLL + Y+HS GI HR + PSNV + + C
Sbjct: 106 LNNIVKC--QKLSDE-HVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 3e-06
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
+HP V +L + V+ P L +L+ L E V+ M LL +AY
Sbjct: 56 CQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERPL-PEAQVKSYMRMLLKGVAY 114
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+H+ GI HR + P+N+L++ L I D
Sbjct: 115 MHANGIMHRDLKPANLLISAD--GVLKIAD 142
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 50.9 bits (120), Expect = 3e-06
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 234 HPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALK-SEWHVRFLMYQLLSAIAY 291
PN+ + + G + V+ +LE++L+ SE F++ Q+LSA+ Y
Sbjct: 57 PPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEY 116
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
LHS GI HR + P N+LL + + D
Sbjct: 117 LHSKGIIHRDIKPENILLDRDG-RVVKLID 145
|
Length = 384 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 4e-06
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRI------LVEA 790
D++S+G +L EL +P F + L + P + + P + L++
Sbjct: 181 DVWSLGVILYELLTGKPPFSGENILDQLQLIRRILG-PPLEFDEPKWSSGSEEAKDLIKK 239
Query: 791 CITKDWTRRPSAKSLLESPYF 811
C+ KD ++RP+A+ +L+ P+F
Sbjct: 240 CLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 4e-06
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 232 LRHPNVAPVLGLLKTSGL--ITSVIPKTPYTLENIL-QFSPNALKSEWHVRFLMYQLLSA 288
L+HPN+ V ++ S L I V+ + L++++ L+SE V+ LM QLLS
Sbjct: 61 LQHPNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSE--VKCLMLQLLSG 118
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+A+LH I HR + SN+LL + L ICD
Sbjct: 119 VAHLHDNWILHRDLKTSNLLLNNR--GILKICD 149
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 4e-06
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+++L+ + L E + ++ +LL + YLHS GI HR + +N+LLT
Sbjct: 83 SLKDLLKSTNQTLT-ESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG 135
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 7e-06
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L HP V +L + GL V+PK L L L V + QLLSAI Y
Sbjct: 217 LSHPAVLALLDVRVVGGLTCLVLPKYRSDLYTYLGARLRPL-GLAQVTAVARQLLSAIDY 275
Query: 292 LHSLGIAHRSVCPSNVLL 309
+H GI HR + NVL+
Sbjct: 276 IHGEGIIHRDIKTENVLV 293
|
Length = 461 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 8e-06
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311
RF ++L A+ YLHS GI HR + P N+LL
Sbjct: 104 TRFYAAEILLALEYLHSKGIIHRDLKPENILLDK 137
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-05
Identities = 18/44 (40%), Positives = 31/44 (70%), Gaps = 2/44 (4%)
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+++ +YQ+L + Y+HS G+ HR + PSN+L+ ++C L ICD
Sbjct: 110 IQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DLKICD 151
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 3e-05
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
HV+FL+YQ+L + Y+HS I HR + PSN+ + + C
Sbjct: 121 HVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 157
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 4e-05
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
H+++ +YQ+L + Y+HS + HR + PSN+LL +C L ICD
Sbjct: 107 HIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC--DLKICD 149
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 4e-05
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 122 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 4e-05
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 219 GVP--SFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 276
GVP + E+S+ L+H N+ + ++ T +T V L + P L +
Sbjct: 45 GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHP-Y 103
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 330
+VR M+QLL +AY+H I HR + P N+L+ S L + D L SI
Sbjct: 104 NVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI--SYLGELKLADFGLARAKSI 155
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 4e-05
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+R Q+L +AYLHS GI HR + +N+L+
Sbjct: 103 IRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG 138
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 5e-05
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
LRH N+ ++ + + + V +T+ + L+ PN L VR ++Q+L I +
Sbjct: 57 LRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDES-RVRKYLFQILRGIEF 115
Query: 292 LHSLGIAHRSVCPSNVLLTDS 312
HS I HR + P N+L++ S
Sbjct: 116 CHSHNIIHRDIKPENILVSQS 136
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 7e-05
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 17/92 (18%)
Query: 232 LRHPNVAPVLGLL-----KTSGLITSVIPKTPYT-------LENILQFSPNALKSEWHVR 279
L+HPNV P++ + K+ SV TPY LEN P+ +E ++
Sbjct: 64 LKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-----PSVKLTESQIK 118
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311
M QLL I YLH I HR + +N+L+ +
Sbjct: 119 CYMLQLLEGINYLHENHILHRDIKAANILIDN 150
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 7e-05
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL--VGFN 328
H +F +YQLL A+ Y+H+ + HR + P N+L C L ICD L V FN
Sbjct: 104 HHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KLKICDFGLARVAFN 155
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-04
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 741 DIFSIGCLLAELHLRRPLFDS---ISLAVYLENGDLPGVMEELPSHTRILVEACITKDWT 797
DI+S+GCL+ EL P F + + LA ++ G + S ++++ + D
Sbjct: 192 DIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPD 251
Query: 798 RRPSAKSLLESPY 810
+RPS + LL+ P
Sbjct: 252 KRPSTEELLQLPL 264
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 203 EGKASGQESKNFLRLIGVP-----SFDES-SVPGCLRHPNVAPVLGLLKTSGLITSVIPK 256
+ GQE L+++G +F E+ S+ L H ++ + G+ I V
Sbjct: 23 DIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIM-VEEY 81
Query: 257 TPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
+ L+ L N + W + + QL SA+ YL + H +VC N+L+
Sbjct: 82 VKFGPLDVFLHREKNNVSLHWKL-DVAKQLASALHYLEDKKLVHGNVCGKNILVA 135
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 1e-04
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 17/90 (18%)
Query: 232 LRHPNVAPVLG--LLKTSGLITSVIPKTPYTLENILQF---------SPNALKSEWHVRF 280
L+H NV ++ L + + + L I++F P+ +KS
Sbjct: 59 LKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKS------ 112
Query: 281 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
L++Q+L+ + YLHS + HR + P+N+L+
Sbjct: 113 LLWQILNGVHYLHSNWVLHRDLKPANILVM 142
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (110), Expect = 1e-04
Identities = 33/92 (35%), Positives = 48/92 (52%), Gaps = 14/92 (15%)
Query: 723 LWRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSISLAVYLENGDLPGVMEELP 781
+WR+K YSK D+FS+G LL E L L+RP FD ++ + + L G + LP
Sbjct: 216 IWRRKP-YSK------KADMFSLGVLLYELLTLKRP-FDGENMEEVM-HKTLAGRYDPLP 266
Query: 782 SHT----RILVEACITKDWTRRPSAKSLLESP 809
+ +V A ++ D RRPS+ LL P
Sbjct: 267 PSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298
|
Length = 496 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 1e-04
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
SE H R MYQLL + Y+HS + HR + P+NV +
Sbjct: 112 SEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFI 147
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-04
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 741 DIFSIGCLLAEL-HLRRPLFDS---ISLAVYLENGDLPGVMEELPSHT----RILVEACI 792
DI+S+GC+L EL L+ P F+ + LA+ + G P +PS R LV + +
Sbjct: 185 DIWSLGCVLYELCTLKHP-FEGENLLELALKILKGQYP----PIPSQYSSELRNLVSSLL 239
Query: 793 TKDWTRRPSAKSLLESPYF 811
KD RPS +L+SP+
Sbjct: 240 QKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
++ H + +YQ+L + Y+HS + HR + P N+L+ C L ICD
Sbjct: 103 TDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--ELKICD 148
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 2e-04
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
SE ++FL+YQ+L + Y+H+ GI HR + P N+ + + C
Sbjct: 116 SEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC 155
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-04
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 32/103 (31%)
Query: 741 DIFSIGCLLAELHLRRPLF------DSISLAVYL----------ENGDLPGVMEEL--PS 782
DI+ IGC+ AE+ RRP+ D + L L LPG +
Sbjct: 209 DIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTN 268
Query: 783 HTRILVE--------------ACITKDWTRRPSAKSLLESPYF 811
+ R L E ++ D +R +A LE PYF
Sbjct: 269 YPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-04
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
SE V+F + +++ A+ YLHS GI HR + P N+LL
Sbjct: 98 SEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL 133
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 3e-04
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L+HPN+ ++ + + + V +T+ N L+ +P + E ++ +++Q L A+ +
Sbjct: 57 LKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGV-PEHLIKKIIWQTLQAVNF 115
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
H HR V P N+L+T + +CD
Sbjct: 116 CHKHNCIHRDVKPENILITKQ--GQIKLCD 143
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 4e-04
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 219 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 276
GVPS E S+ ++H N+ + ++ + + V L+ + SP+ K+
Sbjct: 43 GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPR 102
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
++ +YQ+L IAY HS + HR + P N+L+
Sbjct: 103 LIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLI 135
|
Length = 294 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 4e-04
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS-LAVYLENGDLPGVMEELPSH---TRI-LVEACITKD 795
DI+SIGC + E+ +P S+ LA G G+M LP I V +C+T+D
Sbjct: 190 DIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRD 249
Query: 796 WTRRPSAKSLLESPY 810
RPSA LL +
Sbjct: 250 QHERPSALQLLRHDF 264
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 4e-04
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 222 SFDESSVPGCLRHPNVAPVLGLL---KTSGLITSVIPKTPYTLENILQFSPNALKSEWHV 278
++ E + C+ H N+ +L + K+ V N+ Q L E +
Sbjct: 63 AYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMELDHE-RM 121
Query: 279 RFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 4e-04
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
QLL +AYLHS GI HR + P+N+ L +
Sbjct: 107 QLLEGLAYLHSHGIVHRDIKPANIFLDHN 135
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 4e-04
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
E V+ MYQLL ++ ++H GI HR + P N+L+ D
Sbjct: 98 PEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDI 137
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (103), Expect = 5e-04
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 219 GVP--SFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 276
G P + E+S+ L+H N+ + ++ T +T V L + P L E
Sbjct: 45 GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHPE- 103
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
+V+ ++QLL ++Y+H I HR + P N+L++D+
Sbjct: 104 NVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDT 139
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 5e-04
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
SE +R ++YQ+L +A++H G HR + P N+L++
Sbjct: 97 SESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP 135
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 6e-04
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
SE V++L+YQ+L + Y+HS GI HR + P N+ + + C
Sbjct: 115 SEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDC 154
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 7e-04
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
++ LM QLL + +LHS I HR + P N+L+T
Sbjct: 105 PPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT 141
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 8e-04
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLE-----NILQFSPNALKSEWHVRFLMYQLL 286
L+HPN+ +L + I V LE + +P +KS M L
Sbjct: 59 LKHPNIIGLLDVFGHKSNINLVFEFMETDLEKVIKDKSIVLTPADIKS------YMLMTL 112
Query: 287 SAIAYLHSLGIAHRSVCPSNVLLTD 311
+ YLHS I HR + P+N+L+
Sbjct: 113 RGLEYLHSNWILHRDLKPNNLLIAS 137
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 42.6 bits (100), Expect = 8e-04
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDS---ISLAVYLENGDLPGVMEELPSHTRILVEACIT 793
D DI+S+GC+L E+ F+ +S+ + + G P + E ++++ +
Sbjct: 183 DSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIMQSMLN 242
Query: 794 KDWTRRPSAKSLLESPY 810
KD + RPSA +L +P+
Sbjct: 243 KDPSLRPSAAEILRNPF 259
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 0.001
Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 38/105 (36%)
Query: 741 DIFSIGCLLAELHLRRPLF-------------------------DSISLAVYLENGDLPG 775
D++S+GC+ AEL LR P SL Y+E P
Sbjct: 185 DMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPP 244
Query: 776 VMEELPSHTRI---------LVEACITKDWTRRPSAKSLLESPYF 811
P L++ +T + +R +A+ LE PYF
Sbjct: 245 ----TPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 0.001
Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
++H N+ ++ + I V+ L+ + +E V+ ++ Q+L+ +
Sbjct: 77 IKHENIMGLVDVYVEGDFINLVMDIMASDLKKV--VDRKIRLTESQVKCILLQILNGLNV 134
Query: 292 LHSLGIAHRSVCPSNVLLTD 311
LH HR + P+N+ +
Sbjct: 135 LHKWYFMHRDLSPANIFINS 154
|
Length = 335 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E S+ L+H N+ + ++ T +T V L+ L N L S +V+ M+Q
Sbjct: 53 EVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGN-LMSMHNVKIFMFQ 111
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTD 311
LL ++Y H I HR + P N+L+ +
Sbjct: 112 LLRGLSYCHKRKILHRDLKPQNLLINE 138
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.001
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 275 EWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
E R + +++ A+ YLHS GI HR + P N+L+ +
Sbjct: 92 EDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN 129
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 0.001
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTS-GLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLM 282
E+++ L HPN+ +L + GL+ +V P TL +L + AL + R LM
Sbjct: 28 ETALCARLYHPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLA-ADGALPAGETGR-LM 85
Query: 283 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
Q+L A+A H+ GI HR + P N++++ +
Sbjct: 86 LQVLDALACAHNQGIVHRDLKPQNIMVSQT 115
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.001
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 741 DIFSIGCLLAELHLRR-PLFDS-----ISLAVYLENGDLPGVMEELPS-HTRILVEACIT 793
DI+S+G L E L + P L + +G P + E S R + AC+
Sbjct: 182 DIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQ 241
Query: 794 KDWTRRPSAKSLLESP 809
KD +RPSA LL+ P
Sbjct: 242 KDPKKRPSAAELLQHP 257
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 42.7 bits (100), Expect = 0.001
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 280 FLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+L+YQ+L I +LHS GI HR + PSN+++ C
Sbjct: 127 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 0.001
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 232 LRHPNVAPVLGLLKTSGL--ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 289
LRHPN+ + ++ L I V+ L ++L P SE V+ LM QLL +
Sbjct: 63 LRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPF-SESQVKCLMLQLLRGL 121
Query: 290 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
YLH I HR + SN+LLTD L I D
Sbjct: 122 QYLHENFIIHRDLKVSNLLLTDK--GCLKIAD 151
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 0.002
Identities = 26/100 (26%), Positives = 38/100 (38%), Gaps = 29/100 (29%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLA---------------------VYL--------ENG 771
D++S+GC+ AEL RRPLF S A V L
Sbjct: 188 DMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPR 247
Query: 772 DLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+ E+ L++ +T + +R SA L+ PYF
Sbjct: 248 SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.002
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E+S+ L+H N+ + ++ T +T V L+ + L +VR ++Q
Sbjct: 53 EASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDTDLKQYMDDCGGGLSMH-NVRLFLFQ 111
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTD 311
LL +AY H + HR + P N+L+++
Sbjct: 112 LLRGLAYCHQRRVLHRDLKPQNLLISE 138
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 224 DESSVPGCLRHPNVAPVLG-LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 282
+E + L+HPN+ + + L+ + TL + + L E V + +
Sbjct: 48 NEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYL 107
Query: 283 YQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
+Q++SA++Y+H GI HR + N+ LT
Sbjct: 108 FQIVSAVSYIHKAGILHRDIKTLNIFLT 135
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.003
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 219 GVPS--FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEW 276
GVPS E S+ L HPN+ +L ++ + + V L+ + SP
Sbjct: 40 GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPP 99
Query: 277 HVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
++ +YQLL IAY HS + HR + P N+L+
Sbjct: 100 LIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLI 132
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.003
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 21/89 (23%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNA-----LK-----SEWHVRFL 281
L+HPN+ +G ++TS +L IL+++ N +K E V
Sbjct: 56 LKHPNIVKYIGSIETSD-----------SLYIILEYAENGSLRQIIKKFGPFPESLVAVY 104
Query: 282 MYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310
+YQ+L +AYLH G+ HR + +N+L T
Sbjct: 105 VYQVLQGLAYLHEQGVIHRDIKAANILTT 133
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.003
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 33/106 (31%)
Query: 738 CSKDIFSIGCLLAELHLRRPLF--DS-------ISLAVYLENGDL-PGVMEELPSHTRI- 786
DI+SIG + AE+ ++PLF DS I + D+ PGV LP +
Sbjct: 181 TPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGV-TSLPDYKNTF 239
Query: 787 ---------------------LVEACITKDWTRRPSAKSLLESPYF 811
L+E + D +R SAK L PYF
Sbjct: 240 PKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.004
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 44/126 (34%)
Query: 720 ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLF-------------------- 759
E+LL + +SYS DI+++GC++AEL+ RPLF
Sbjct: 168 EILL--RSTSYS------SPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPT 219
Query: 760 -----DSISLAVYLENGDLPGVMEELPSHTRI---------LVEACITKDWTRRPSAKSL 805
+ LA L P H I L++ + D +RP+A
Sbjct: 220 KQDWPEGYKLASKL-GFRFP-QFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQA 277
Query: 806 LESPYF 811
L+ PYF
Sbjct: 278 LQHPYF 283
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.004
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
LQ P SE RF ++L A+ YLH LGI +R + P N+LL +S
Sbjct: 92 LQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHES 139
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 13/35 (37%), Positives = 21/35 (60%)
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
++ MYQLL +A+ H G+ HR + P N+L+
Sbjct: 112 IKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 0.004
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG---LITSVIPKTPYTL 261
AS +E + FL E+S+ L HPN+ +LG+ ++T +P L
Sbjct: 39 GASEEEREEFLE--------EASIMKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGD--L 88
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
+ L+ L + ++ Q+ + YL S HR + N L+T++
Sbjct: 89 LDFLRKHGEKLTLKDLLQM-ALQIAKGMEYLESKNFVHRDLAARNCLVTEN 138
|
Length = 258 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.004
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 18/108 (16%)
Query: 212 KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLENILQ--FS 268
K FLR E+ + L HP + PV + + +P YTL+++L+ +
Sbjct: 47 KRFLR--------EAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQ 98
Query: 269 PNALKSEWHVR-----FL--MYQLLSAIAYLHSLGIAHRSVCPSNVLL 309
+L E + FL +++ + I Y+HS G+ HR + P N+LL
Sbjct: 99 KESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILL 146
|
Length = 932 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.004
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTP-----YTLENILQFSPNALKSEWHVRFLMYQLL 286
L H N+ LG T ++ + P L +F VRF Q+L
Sbjct: 65 LDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQL------VRFFTEQVL 118
Query: 287 SAIAYLHSLGIAHRSVCPSNVLL 309
+AYLHS GI HR + N+L+
Sbjct: 119 EGLAYLHSKGILHRDLKADNLLV 141
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1566 | |||
| cd06071 | 275 | Beach BEACH (Beige and Chediak-Higashi) domains, i | 100.0 | |
| PF02138 | 270 | Beach: Beige/BEACH domain; InterPro: IPR000409 The | 100.0 | |
| KOG4190 | 1034 | consensus Uncharacterized conserved protein [Funct | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG1787 | 1126 | consensus Kinase A-anchor protein Neurobeachin and | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.98 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 99.97 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 99.97 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 99.97 | |
| KOG1786 | 1081 | consensus Lysosomal trafficking regulator LYST and | 99.97 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 99.97 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.97 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.97 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.97 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.97 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.97 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.97 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.96 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.96 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.96 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 99.96 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.96 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.96 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.96 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.96 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 99.96 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.95 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.95 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.95 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.95 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.95 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.95 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.94 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.94 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.94 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.94 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.94 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.94 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.94 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 99.94 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.94 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.94 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.94 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.93 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.93 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.93 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.93 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.93 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.93 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.93 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.93 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.93 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.93 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.93 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.93 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.93 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.93 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.93 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.93 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.93 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.93 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.93 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.92 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.92 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.92 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.92 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.92 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.92 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.92 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.92 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.92 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.92 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.92 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.92 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.92 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.92 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.92 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.92 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.92 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.91 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.91 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.91 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.91 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.91 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.91 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.91 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.91 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.91 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.91 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.91 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.91 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.91 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.91 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.91 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.91 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.91 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.91 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.91 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.91 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.91 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.91 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.91 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.91 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 99.91 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.91 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.91 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.9 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.9 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.9 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.9 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.9 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.9 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.9 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.9 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.9 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.9 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.9 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.9 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.9 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.9 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.9 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.9 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.9 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.9 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.9 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.9 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.9 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.89 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.89 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.89 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.89 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.89 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.89 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.89 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.89 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.89 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.89 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.89 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.89 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.89 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.89 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.89 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.89 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.89 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.89 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.89 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.89 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.88 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.88 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.88 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.88 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.88 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.88 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.88 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.88 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.88 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.88 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.88 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.88 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.88 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.88 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.88 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.87 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.87 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.87 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.87 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.87 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.87 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.87 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.87 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.87 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.87 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.87 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.87 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.87 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.87 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.87 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.87 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.87 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.87 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.87 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.87 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.87 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.87 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.87 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.86 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.86 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.86 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.86 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.86 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.86 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.86 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.86 | |
| PTZ00421 | 493 | coronin; Provisional | 99.86 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.86 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.86 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.86 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.86 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.86 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.86 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.86 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.86 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.86 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.86 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.86 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.86 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.86 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.86 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.86 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.86 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.86 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.86 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.86 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.86 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.86 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.86 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.86 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.86 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.86 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.86 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.86 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.86 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.86 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.86 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.86 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.86 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.86 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.86 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.86 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.85 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.85 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.85 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.85 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.85 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.85 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.85 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.85 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.85 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.85 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.85 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.85 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.85 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.85 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.85 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.85 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.85 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.85 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.85 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.85 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.85 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.85 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.85 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.85 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.85 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.85 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.85 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.85 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.85 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.85 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.85 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.85 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.85 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.85 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.85 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.85 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.85 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.85 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.85 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.85 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.84 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.84 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.84 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.84 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.84 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.84 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.84 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.84 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.84 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.84 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.84 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.84 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.84 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.84 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.84 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.84 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.84 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.84 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.84 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.84 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.84 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.84 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.84 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.84 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.84 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.84 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.84 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.84 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.84 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.84 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.84 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.84 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.84 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.84 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.84 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.84 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.84 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.83 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.83 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.83 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.83 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.83 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.83 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.83 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.83 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.83 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.83 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.83 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.83 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.83 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.83 | |
| PTZ00420 | 568 | coronin; Provisional | 99.83 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.83 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.83 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.83 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.83 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.83 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.83 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.83 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.83 | |
| KOG0267 | 825 | consensus Microtubule severing protein katanin p80 | 99.83 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.83 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.83 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.83 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.83 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.83 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.83 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.83 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.83 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.82 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.82 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.82 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.82 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.82 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.82 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.82 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.82 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.82 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.82 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.82 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.82 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.82 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.82 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 99.82 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.82 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.82 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.82 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.82 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.82 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.82 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.82 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.82 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.82 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.82 | |
| KOG0294 | 362 | consensus WD40 repeat-containing protein [Function | 99.81 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.81 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.81 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.81 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.81 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.81 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.81 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.81 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.81 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.8 | |
| PTZ00421 | 493 | coronin; Provisional | 99.8 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.8 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.8 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.8 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.8 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.8 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.8 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.8 | |
| PTZ00420 | 568 | coronin; Provisional | 99.8 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.79 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.79 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.79 | |
| KOG1786 | 1081 | consensus Lysosomal trafficking regulator LYST and | 99.79 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.79 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.79 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.79 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.79 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.79 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.79 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.78 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.78 | |
| KOG0299 | 479 | consensus U3 snoRNP-associated protein (contains W | 99.78 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.78 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.78 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.77 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.77 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.77 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.76 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.75 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.75 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.74 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.74 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.73 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.73 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.73 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.73 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.73 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.72 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.72 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.72 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.72 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.71 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.71 | |
| KOG0646 | 476 | consensus WD40 repeat protein [General function pr | 99.71 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.71 |
| >cd06071 Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-65 Score=580.38 Aligned_cols=233 Identities=40% Similarity=0.674 Sum_probs=204.1
Q ss_pred cccccccccCCchhhhHHHhhcccccCCccceeecceeE-eeccC-CCCCCCcccccccccccccccCCcceee-e----
Q 000399 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQLDF-T---- 442 (1566)
Q Consensus 370 ~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~~~~-~---- 442 (1566)
++.|..|+||||+|||.||.++||+++|++||||||||+ ||.++ .|++++..||||+||||++++++.+... .
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~sGRSf~D~sqYPIfPWvi~dy~s~~ldl~~~~~~RDLskpigal~~~r~~~~~~~~~~~ 80 (275)
T cd06071 1 TKKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKPIGALNKERLQLLKERYESD 80 (275)
T ss_pred CchhhcCCccHHHHHHHHHHHhCCCCCCcccCCccCeeecCCCCcccccCCcccccCCCCchhhcCHHHHHHHHHHHhhh
Confidence 468999999999999999999999999999999999999 77765 5889999999999999999987655432 2
Q ss_pred eecCCCCccccHhhhhhhccccccccccchhHHHHhhhhcc--CCCCCchhhhhhh----c--cCCCCccCccccCcchh
Q 000399 443 YSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY--EPNEYPSTMQRLY----Q--WTPDECIPEFYCDPQIF 514 (1566)
Q Consensus 443 ~~~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~--~~~~~~~~~~~~~----~--~~~~EliPEff~~p~~~ 514 (1566)
....+.|+||+++|+++++|++||+|++|||.+++.++++. .+++.+.++...+ . +|++|||||||++||||
T Consensus 81 ~~~~~~~~~y~shyS~~~~V~~yLvR~ePft~~~~~lq~g~fd~~~RlF~si~~~~~~~~~~~~d~~ELIPEFf~~Pe~f 160 (275)
T cd06071 81 SDDSDPPFHYGSHYSNPAIVLYYLVRLEPFTTLHLSLQGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFF 160 (275)
T ss_pred cccCCCCCCCCCCCCCHHHHHHHHhHcCCccHHHHHHhcCCcCCcccchhhHHHHHHHHHccCCCcccCCchHhcCHHHH
Confidence 23456789999999999999999999999999999888753 3466665554443 3 78999999999999999
Q ss_pred hccCC---------CCcccccCCCCCChHHHHHHhhhhhcccccceeeeeeEEeeeecccccccccccccccccCCCCCC
Q 000399 515 YSQHP---------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTK 585 (1566)
Q Consensus 515 ~~~~~---------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDLifG~kq~g~~a~~a~Nvf~~~~~~~~ 585 (1566)
+|.|. .|+||+||+||++|++||++||+||||+|||+|||+||||||||||+|++|++|+|||+|.+++..
T Consensus 161 ~N~n~~~lg~~~g~~~~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~ 240 (275)
T cd06071 161 LNINKFDFGKQDGEKVNDVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTYEGS 240 (275)
T ss_pred hCCCcccccccCCCcccceecCCCcCCHHHHHHHHHHHHcccHhhhhhhhhhhhhcccccCCHHHHHhcCCCcccccCCc
Confidence 99763 389999999999999999999999999999999999999999999999999999999999987632
Q ss_pred ----------------Ccccc--ccccccCCCCcc
Q 000399 586 ----------------PKSVG--RLQLFTQPHPVR 602 (1566)
Q Consensus 586 ----------------~~~~g--~~qlF~~pHp~r 602 (1566)
...+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 275 (275)
T cd06071 241 VDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275 (275)
T ss_pred cccchhhHHHHHHHHHHHhcCCCcchhccCCCCCC
Confidence 13456 899999999998
|
This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins. |
| >PF02138 Beach: Beige/BEACH domain; InterPro: IPR000409 The BEACH domain is found in eukaryotic proteins that have diverse cellular functions ranging from lysosomal traffic to apoptosis and cytokinesisin vesicle trafficking, membrane dynamics, and receptor signaling | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-64 Score=570.70 Aligned_cols=233 Identities=41% Similarity=0.672 Sum_probs=159.6
Q ss_pred cccccccccCCchhhhHHHhhcccccCCccceeecceeE-eeccC-CCCCCCcccccccccccccccCC-cceeeeee--
Q 000399 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGD-EQLDFTYS-- 444 (1566)
Q Consensus 370 ~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~-~~~~~~~~-- 444 (1566)
++.|..|+||||+|||.||.+|||+++|++||||||||+ ||.++ .|++++..||||+||||++++.+ +.+...|.
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~aGRSf~D~sqYPIFPWv~~dy~s~~ldl~~~~~~RdLskPiga~~~~r~~~~~~~~~~~ 80 (270)
T PF02138_consen 1 TEKWQNGEISNFEYLMYLNILAGRSFNDLSQYPIFPWVISDYDSEELDLNDPSNYRDLSKPIGAQNEERLEKLKERYEEM 80 (270)
T ss_dssp HHHHHTTSS-HHHHHHHHHHHCT--TT-GGG---B---B---SSSS--TT-GGGB--TTS-HHHCSHHHHHHHHHHHHC-
T ss_pred CcchhcCCCcHHHHHHHHhHHhccCCCCCccCccccchhccCCccccccCCccccccccccccccCHHHHHHHHHHHHhh
Confidence 468999999999999999999999999999999999999 88765 68899999999999999987643 22333333
Q ss_pred -cCCCCccccHhhhhhhccccccccccchhHHHHhhhhc--cCCCCCchhhhhhhcc------CCCCccCccccCcchhh
Q 000399 445 -SSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLYQW------TPDECIPEFYCDPQIFY 515 (1566)
Q Consensus 445 -~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~~~------~~~EliPEff~~p~~~~ 515 (1566)
..+.|+||+++|+++++|++||+|++|||.+++.++++ +.+++.+.++.+.+.+ +++|||||||++||||+
T Consensus 81 ~~~~~~~~y~s~ys~~~~v~~~L~R~ePft~l~~~lq~g~fD~~~r~F~SI~~~~~~~~~~~~d~~EliPEff~~Pe~f~ 160 (270)
T PF02138_consen 81 EEFEPPFHYGSHYSSPGTVLYYLVRLEPFTSLHIDLQSGKFDVPDRLFSSIEDTWNSVTENMNDVKELIPEFFYLPEFFK 160 (270)
T ss_dssp -SSS---SBSS-SS-HHHHHHHTTTSTTHHHHHHHCCTTS---CCCSS-BHHHHHHHHHH-TT----B-GGGGT-GGGGS
T ss_pred hccCCCccccCCCCCcchhhhhhcccChHHHHHHHHhccccCCchHHHHHHHHHHHHhhcCCccccccChhhhCCHHHhc
Confidence 23478999999999999999999999999999999876 3688999999888764 67999999999999999
Q ss_pred ccCC-------CCcccccCCCCCChHHHHHHhhhhhcccccceeeeeeEEeeeecccccccccccccccccCCCCCCC--
Q 000399 516 SQHP-------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP-- 586 (1566)
Q Consensus 516 ~~~~-------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDLifG~kq~g~~a~~a~Nvf~~~~~~~~~-- 586 (1566)
|.+. +|+||+||+||+||++||++||+||||+|||++||+||||||||||+|++|++|+|||+|.+++...
T Consensus 161 N~n~~~~g~~~~~~dV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~~~~ 240 (270)
T PF02138_consen 161 NINNFDLGKGEDVDDVELPPWAKSPFEFVYKHRKALESDYVSQNLHHWIDLIFGYKQRGKEAVEAKNVFHPLTYEDSWIE 240 (270)
T ss_dssp -TT-SS--BS-B-SS-B--TT-SSHHHHHHHHHHHHCSHHHHTTHHHHHHHHTSCCCSCHHHHHTT--B-CCCSTTS---
T ss_pred ccccccccCCCccceeecCCccchHHHHHHHHHHHHhhhHHHhhhhHHHHHhhCcccccHHHHHHhhcccccCCCccccC
Confidence 9865 6899999999999999999999999999999999999999999999999999999999999987644
Q ss_pred ------------cccc--ccccccCCCCcc
Q 000399 587 ------------KSVG--RLQLFTQPHPVR 602 (1566)
Q Consensus 587 ------------~~~g--~~qlF~~pHp~r 602 (1566)
..+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 270 (270)
T PF02138_consen 241 DPMEREAIEAQLKNFGQVPIQLFTKPHPKR 270 (270)
T ss_dssp SHHHHHHHHHHHHHC--------SS-----
T ss_pred CHHHHHHHHHHHHhcCCChHHHhCCCCCCC
Confidence 4568 789999999998
|
The name BEACH is derived from beige and Chediak-Higashi syndrome (CHS). CHS is a rare, autosomal recessive disorder that can cause severe immunodeficiency and albinism in humans and other mammals, and beige is the name for the CHS disease in mice [, ]. The BEACH domain was first described in the lysosomal-trafficking regulators Beige protein and its human homologue CHS protein Q99698 from SWISSPROT. It is also found in distantly related proteins like, for example, the FAN proteins O35242 from SWISSPROT and Q92636 from SWISSPROT which are factor associated with neutral sphingomyelinase activation []. It has also been described in Dictyostelium proteins Lvs []. The BEACH domain is usually followed by a series of WD repeats (PDOC00574 from PROSITEDOC). The function of the BEACH domain is unknown.; PDB: 1MI1_B 1T77_C. |
| >KOG4190 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-62 Score=561.10 Aligned_cols=615 Identities=20% Similarity=0.311 Sum_probs=450.4
Q ss_pred cccccccccCCchhhh--hHHHHHHHHHhhcChhhHhhhcHHHHHHHHhhcC--------------------------c-
Q 000399 861 YCLPLVATPLSDAEAE--CAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTG--------------------------Y- 911 (1566)
Q Consensus 861 ~~L~~i~~~ls~~~~~--~~~~lf~~~~k~l~~~~t~~~L~~~i~~~~~~~~--------------------------~- 911 (1566)
..+|+|++.+.+++.. .+|.||++|++++|...||++|+..+.|+|+.++ +
T Consensus 8 lL~PHi~dl~~De~~~il~a~~lfdpIa~algvsqtqqhL~~~L~kl~dvesv~~Pddggsngstd~~~~l~Fsasssfk 87 (1034)
T KOG4190|consen 8 LLAPHIADLFDDEDHIILCAQLLFDPIAAALGVSQTQQHLFDFLFKLEDVESVDFPDDGGSNGSTDCDEFLFFSASSSFK 87 (1034)
T ss_pred HhhhhHHhhccChhHHHHHHHHhcchhHHHhcccHHHHHHHHHHhhhhccccccCCcccCcCCCcCCCceeEEeeccccc
Confidence 6789999999999888 9999999999999999999999999999997322 3
Q ss_pred ceeEeeechhhHHHHHHHhhhhHhHHhh-ccceee------------ecccc------------------------cc--
Q 000399 912 SHLKVSLLQDSFVREIWNRIGKQAYLEM-VHPLVI------------SNLYA------------------------AP-- 952 (1566)
Q Consensus 912 ~~~~~~l~~~~~~~~l~~~~g~~~~l~~-~~~~~~------------~~~~~------------------------~~-- 952 (1566)
|++.||||||+||++||||||++|||+| |.||++ +++|| +|
T Consensus 88 srksvklyhhsfllrliVRfgi~cfihhFiapliEa~Ggykepeqgngyhyhsggsrrtsknl~~aSe~elhk~dVaPe~ 167 (1034)
T KOG4190|consen 88 SRKSVKLYHHSFLLRLIVRFGIPCFIHHFIAPLIEAFGGYKEPEQGNGYHYHSGGSRRTSKNLKCASEHELHKLDVAPEF 167 (1034)
T ss_pred cccchhhhhhhhhhhheeeecCchhhhhhhhHHHHHhcCcCCcccCCccccccCcccccccccccchHhHhhhhccCCCc
Confidence 6889999999999999999999999999 999999 45554 12
Q ss_pred --------------C-C------Cccccc--------------------eeeee-----c--------------------
Q 000399 953 --------------H-K------SSASAA--------------------SVLLI-----G-------------------- 966 (1566)
Q Consensus 953 --------------~-~------~~~~~~--------------------~~~~~-----~-------------------- 966 (1566)
+ + .+++++ ....| |
T Consensus 168 k~dieeif~fEddhdkaS~qd~~~id~~dm~~~~~aa~aEEA~e~dg~pdklVIneliygarispdklSLkeS~~~~ai~ 247 (1034)
T KOG4190|consen 168 KKDIEEIFLFEDDHDKASIQDCDHIDQCDMAAFQQAAEAEEACEQDGHPDKLVINELIYGARISPDKLSLKESALEDAIN 247 (1034)
T ss_pred CcchhhheeeccccchhhhhhchhHHHHhhHHHHhhhhhHHHHhhcCCCcchhhhhhhhccccCccccccchhhCccccc
Confidence 0 0 111111 01111 0
Q ss_pred ------cccccCcc--eEE------------------eccc--------------------------------hh-----
Q 000399 967 ------SSEELGVP--ITV------------------HQTI--------------------------------LP----- 983 (1566)
Q Consensus 967 ------~~~~l~~~--~~~------------------~~~~--------------------------------~~----- 983 (1566)
-||+|.|| .|. |+.+ +|
T Consensus 248 pppigprsP~IEi~m~~TaggirrsfqlsaidcdigsrksVd~fDli~~a~eqi~p~aee~eaeasdslqasvi~~isEA 327 (1034)
T KOG4190|consen 248 PPPIGPRSPMIEIIMCETAGGIRRSFQLSAIDCDIGSRKSVDLFDLIFLAHEQICPGAEEFEAEASDSLQASVIPPISEA 327 (1034)
T ss_pred CCCCCCCCCeeEeeecccccccccccccccccccccccccchHHHHHHHhhhccCCchhhHHHHhhhhcccccCCcHHHH
Confidence 02222222 010 1000 00
Q ss_pred ------------------hhhhcCC---------------cccCCC----------------------------------
Q 000399 984 ------------------LIQCFGR---------------GICPDG---------------------------------- 996 (1566)
Q Consensus 984 ------------------l~~~~~~---------------~~~~~~---------------------------------- 996 (1566)
|+||+|| .+||.|
T Consensus 328 ~A~~N~~iSemaaESi~WLahRlGPVi~akFIsrNlLkilalCY~~~E~l~~E~ddggssfnsspdaanl~~Fnia~a~v 407 (1034)
T KOG4190|consen 328 CASMNCDISEMAAESIMWLAHRLGPVICAKFISRNLLKILALCYEAFEMLGLEQDDGGSSFNSSPDAANLAVFNIALAGV 407 (1034)
T ss_pred HhhhcCcHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHhCcccCCCCccccCCcchhhhhhhhhhhhcc
Confidence 6999999 366655
Q ss_pred ---------ceEEEEeccccchhHHHHHHHHHHHHHHhhhccccCCCCCCccccchhhHHHHHhhhcccchhccchhHHH
Q 000399 997 ---------IDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVV 1067 (1566)
Q Consensus 997 ---------~~~l~~i~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1566)
.+||+.|+++|||+||+.|||||+++||..|. +|++..+ |+|+|+.+++++++||+|+|..+|
T Consensus 408 vgD~saaRi~ecLm~IaalYgenFillQ~fP~~sdLI~lc~--KRisg~L------EgaiiSs~qil~~mipclsDa~iM 479 (1034)
T KOG4190|consen 408 VGDESAARIEECLMEIAALYGENFILLQFFPFCSDLIELCH--KRISGQL------EGAIISSFQILELMIPCLSDAQIM 479 (1034)
T ss_pred ccchhHHHHHHHHHHHHHHhcchhhhhhhhHHHHHHHHHHh--hhccccc------chhhhhHHHHHHHhccccchHHHH
Confidence 89999999999999999999999999999999 4898866 999999999999999999999999
Q ss_pred HHHhcccce-----eeeeehhhcccchhhhHHHHHH--------HHHHHHHhCCCcchhccc-hhhHHHHhhhhhchhcc
Q 000399 1068 KELIEDRSC-----LHVMVLMHTNLEITVLQVAAST--------LMAICQRIGPDLTALHVL-PHLKELFDELAFSQECS 1133 (1566)
Q Consensus 1068 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~r~g~~~~~~~~~-~~l~~~f~~~~f~~~~~ 1133 (1566)
|.||++.+ |...+|+++|+.||+|++..+. |++|++|||.||||+|.+ |.|.+|| +.|++.++
T Consensus 480 -ehlqhimldaillpilrllsstnlvmpsgylg~~~ia~Kf~dai~ais~kiGsdmTReh~cQPllnpFf--LiFnkaf~ 556 (1034)
T KOG4190|consen 480 -EHLQHIMLDAILLPILRLLSSTNLVMPSGYLGEEFIAQKFCDAIHAISQKIGSDMTREHACQPLLNPFF--LIFNKAFE 556 (1034)
T ss_pred -HHHHHHhhhhhhhhHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHhcchhhHHHhcCccccchh--hhhhhhcC
Confidence 88876654 5555699999999999988754 899999999999999999 9999999 99999877
Q ss_pred cCcccc---cCcccccCCCCC-Ccccccccc----ceeeeeccchhhhhhhHHHHhhhhHHHHHHHHHhhhcccceeecc
Q 000399 1134 DESGSL---GGSLKVPKPKVD-GESQIESRM----DLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTG 1205 (1566)
Q Consensus 1134 ~~~~~~---~~~~~~~~~~~~-~~~~~~~~~----~~~~~~y~~~~~~~g~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~ 1205 (1566)
..+..- -.++....|..+ +.+.+|.|. +||...|..|++.+|...|.+.|.+-.++ +..||+.+++...
T Consensus 557 ip~tD~acdlanlsligga~qPera~eeL~dVfg~ela~~a~~~F~k~lGea~lkr~~~dl~Fl---i~~cheheqpngq 633 (1034)
T KOG4190|consen 557 IPETDEACDLANLSLIGGAKQPERAEEELFDVFGLELAEDAVDKFAKELGEAFLKRFCDDLAFL---IPFCHEHEQPNGQ 633 (1034)
T ss_pred CCCcchhhhhcchhhcccccCchhhHHHHHhcccHHHHHHHHHHHHHHhchHHHHhhccChhhe---ehhhccccCCCCC
Confidence 644221 123333445444 556666554 99999999999999999999999999999 9999998876422
Q ss_pred cccccccccccccCcccCCCCc-CccCccceeecccccccccCCCCcccccccccccccccccchHHHHHHhhccccCCC
Q 000399 1206 ESSRISEENISAKRPLLNKGST-SQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEP 1284 (1566)
Q Consensus 1206 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~i~~~~~~~le~~~~~~~~~~~~~~~H~~ 1284 (1566)
+.... +.+......+...... ..|++-......+|++.. ..+...+.+.....+.+++++..+|+.+.-.
T Consensus 634 ~k~qi-A~n~~sgqdvdsvdasce~faAnSfG~~i~GNRL~---~ar~n~elisdm~a~~Ldqmp~~~hlkGn~l----- 704 (1034)
T KOG4190|consen 634 PKAQI-AHNPPSGQDVDSVDASCEAFAANSFGGMISGNRLF---SARANSELISDMSAGGLDQMPFCDHLKGNLL----- 704 (1034)
T ss_pred CCccc-ccCCCCccccccccchhhhhhhhcccceeecceee---eeccCCccchhhhhcCccccccccccccchH-----
Confidence 22100 0110000000000101 111221111222234332 3455677778888999999999988877211
Q ss_pred ceeccCCCCCCCCCcccccccCccCCCCceEeeeeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEec---
Q 000399 1285 WFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT--- 1361 (1566)
Q Consensus 1285 ~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~--- 1361 (1566)
.||+ .+.-+ ..+...-++++.-.+..+.||++.|+.++--.+++.++|+|+ |+||++|.+.
T Consensus 705 A~W~---------~ets~---~e~dt~~ln~~~irL~nf~GH~~~iRai~AidNENSFiSASk----DKTVKLWSik~Eg 768 (1034)
T KOG4190|consen 705 AVWC---------AETSA---AECDTDNLNFDHIRLCNFTGHQEKIRAIAAIDNENSFISASK----DKTVKLWSIKPEG 768 (1034)
T ss_pred HHHH---------hhhhH---hhcCCcccccceeeeecccCcHHHhHHHHhcccccceeeccC----CceEEEEEecccc
Confidence 1332 11000 011233356666688999999999999999999999999998 9999999985
Q ss_pred ----ccccccccccccccccceEEeecCCceeeccCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCC
Q 000399 1362 ----RINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1437 (1566)
Q Consensus 1362 ----tg~~i~tl~gH~~~V~sVafsp~g~~LaSgDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~ 1437 (1566)
|..|..+|+.|+.+|+++.|..+.+.++||||.|++||..-|+.+..+...... .+
T Consensus 769 D~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk~---~a----------------- 828 (1034)
T KOG4190|consen 769 DEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPKE---GA----------------- 828 (1034)
T ss_pred CccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCccc---CC-----------------
Confidence 446899999999999999999999999999999999999999888754332110 00
Q ss_pred CCcccccccccccccchhHHHhhhhhccceEEEE-ecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCccc
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG-IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQ 1516 (1566)
Q Consensus 1438 ~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sg-s~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~ 1516 (1566)
...|.++.-- +..++++| +...||+++|.|.+.-+..|+..+.. +.+..++++++.
T Consensus 829 -----~~~ikcl~nv-----------~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~-~Pna~~R~iaVa------ 885 (1034)
T KOG4190|consen 829 -----GGNIKCLENV-----------DRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP-GPNALTRAIAVA------ 885 (1034)
T ss_pred -----CceeEecccC-----------cchheeeeccchhhheeeecccccceeeEEeccCC-CCchheeEEEec------
Confidence 1112222110 13355555 88999999999999888888765332 345667777765
Q ss_pred CCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeee
Q 000399 1517 AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRI 1562 (1566)
Q Consensus 1517 ~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vaf 1562 (1566)
+.|.|+|+|-++|.|.+.|.|+|+.+.+|+..+....+++.
T Consensus 886 -----~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaa 926 (1034)
T KOG4190|consen 886 -----DKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAA 926 (1034)
T ss_pred -----cCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcC
Confidence 55689999999999999999999999999887776665553
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-43 Score=397.69 Aligned_cols=180 Identities=19% Similarity=0.240 Sum_probs=149.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..+.|.+.+.||+|+||.|-+|..+ .+|+.||||++.+.+...... +..+.. ...+|++||++|+|||||+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~------~tgk~vAiKIi~krk~~~~s~-~~~~~~--~v~~EieILkkL~HP~IV~ 240 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEK------KTGKQVAIKIINKRKSTGCSR-AIAKTR--DVQNEIEILKKLSHPNIVR 240 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEc------ccCcEEEeeeeehhhcccccc-cccchh--hhHHHHHHHHhcCCCCEEE
Confidence 3567999999999999999998864 689999999999887655331 111100 1238999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWL 317 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~v 317 (1566)
++++|+..+..||||||++| +|.+.+- .++.+.+..-+.+++|++.|+.|||++||+||||||+|||++.+.. ..+
T Consensus 241 ~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~ll 318 (475)
T KOG0615|consen 241 IKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLL 318 (475)
T ss_pred EeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEE
Confidence 99999999999999999997 9999987 4556788888999999999999999999999999999999988721 279
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
||+|||+|+.... +.++.+.+|||.|.|||++.
T Consensus 319 KItDFGlAK~~g~------------~sfm~TlCGTpsYvAPEVl~ 351 (475)
T KOG0615|consen 319 KITDFGLAKVSGE------------GSFMKTLCGTPSYVAPEVLA 351 (475)
T ss_pred Eecccchhhcccc------------ceehhhhcCCccccChhhee
Confidence 9999999996442 22455667999999999874
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=438.07 Aligned_cols=249 Identities=16% Similarity=0.227 Sum_probs=192.6
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---------eehhhhhccCcceeeeecC-cceEEEeecc
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---------ILSSIRAHHGALRSVAVGQ-DECTVFTAGI 1347 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---------~l~tl~gH~~~V~slafsp-d~~~LaSgS~ 1347 (1566)
..|.+.|++ |+|+|.+ +++||.|++|++||.... ....+. +...|.+++|++ ++.+++||+.
T Consensus 480 ~~~~~~V~~i~fs~dg~~-----latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~ 553 (793)
T PLN00181 480 LNSSNLVCAIGFDRDGEF-----FATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNF 553 (793)
T ss_pred cCCCCcEEEEEECCCCCE-----EEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeC
Confidence 458899997 8999998 999999999999997531 112233 356899999987 5788999997
Q ss_pred CCCcccceeeEEecccccccccccccccccceEEee-cCCceeec--cCcEEEeecCCCcEEEEeecccc----------
Q 000399 1348 GPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM---------- 1414 (1566)
Q Consensus 1348 ~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp-~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~---------- 1414 (1566)
|++|++||+.+++.+..+.+|.+.|++++|+| ++..++|| |++|++||++++.++.++..+..
T Consensus 554 ----Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~ 629 (793)
T PLN00181 554 ----EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSES 629 (793)
T ss_pred ----CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCC
Confidence 99999999999999999999999999999997 56778777 99999999999998877764321
Q ss_pred -cccccCCCCCcccccccCCCC--CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC------
Q 000399 1415 -DSLHGGSPSSSISKINTDQVG--MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG------ 1485 (1566)
Q Consensus 1415 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg------ 1485 (1566)
..+.+++.++.+.+|+..... ...+.+|...|.++.|.+ +..+++|+.|++|++||++.+
T Consensus 630 g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~-----------~~~lvs~s~D~~ikiWd~~~~~~~~~~ 698 (793)
T PLN00181 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVD-----------SSTLVSSSTDNTLKLWDLSMSISGINE 698 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeC-----------CCEEEEEECCCEEEEEeCCCCccccCC
Confidence 123334445566777765443 234567888898888863 678999999999999999853
Q ss_pred ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEe-------------ec
Q 000399 1486 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW-------------RA 1552 (1566)
Q Consensus 1486 ~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l-------------~g 1552 (1566)
.+++++.+|. ..+.++++ ++++.+||+|+.|+.|++|+...+..+..+ ..
T Consensus 699 ~~l~~~~gh~------~~i~~v~~-----------s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~ 761 (793)
T PLN00181 699 TPLHSFMGHT------NVKNFVGL-----------SVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDD 761 (793)
T ss_pred cceEEEcCCC------CCeeEEEE-----------cCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCC
Confidence 5677777763 33444444 466679999999999999998766544332 24
Q ss_pred cCceeeEeeeeccC
Q 000399 1553 HDGYVTKVRIISKR 1566 (1566)
Q Consensus 1553 H~~~V~~VafspdG 1566 (1566)
|...|.+|+|+|+|
T Consensus 762 ~~~~V~~v~ws~~~ 775 (793)
T PLN00181 762 ASQFISSVCWRGQS 775 (793)
T ss_pred CCcEEEEEEEcCCC
Confidence 56789999999985
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=373.33 Aligned_cols=152 Identities=21% Similarity=0.303 Sum_probs=133.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+++|+.+.++|+|+||+||+|+++ ++|++||||++.....+.. .++. ++||+++|++++|||+|.|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk------~TgqIVAIKkF~Esedd~~-VkKI-------AlREIrmLKqLkH~NLVnL 66 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNK------DTGQIVAIKKFVESEDDPV-VKKI-------ALREIRMLKQLKHENLVNL 66 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccC------CcccEEEEEeeccCCccHH-HHHH-------HHHHHHHHHhcccchHHHH
Confidence 357999999999999999999985 7999999999876543322 2222 3589999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++|.....++||+|||+.++.+-|...+++ +++..++.|++|++.|+.|||++++|||||||+||||+.++ .+|||
T Consensus 67 iEVFrrkrklhLVFE~~dhTvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g--vvKLC 143 (396)
T KOG0593|consen 67 IEVFRRKRKLHLVFEYCDHTVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG--VVKLC 143 (396)
T ss_pred HHHHHhcceeEEEeeecchHHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC--cEEec
Confidence 9999999999999999999888888766665 68889999999999999999999999999999999999999 89999
Q ss_pred CcCCCCccc
Q 000399 321 DKPLVGFNS 329 (1566)
Q Consensus 321 DFGlA~~~~ 329 (1566)
|||+||...
T Consensus 144 DFGFAR~L~ 152 (396)
T KOG0593|consen 144 DFGFARTLS 152 (396)
T ss_pred cchhhHhhc
Confidence 999999533
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=391.44 Aligned_cols=155 Identities=25% Similarity=0.322 Sum_probs=136.9
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCc
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNI 237 (1566)
.+..+.|+.+++||+|+||.||+|++ ..+|++||+|++..+..... +.+.++|||.||++|+||||
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~------~~tgkivALKKvr~d~~~~~--------~~~t~~REI~ILr~l~HpNI 178 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARD------LETGKIVALKKVRFDNEKEG--------FPITAIREIKILRRLDHPNI 178 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeee------cccCcEEEEEEeecccCCCc--------chHHHHHHHHHHHhcCCCcc
Confidence 34567899999999999999999997 47999999999987543322 22355699999999999999
Q ss_pred cccccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 238 APVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 238 V~l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++|.+...+. ..+|||+|||+++|..++. ++.-.|++.+++.|++||+.||+|||++||+|||||.+||||+.+|
T Consensus 179 ikL~eivt~~~~~siYlVFeYMdhDL~GLl~-~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G-- 255 (560)
T KOG0600|consen 179 IKLEEIVTSKLSGSIYLVFEYMDHDLSGLLS-SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG-- 255 (560)
T ss_pred cceeeEEEecCCceEEEEEecccchhhhhhc-CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC--
Confidence 9999998776 6999999999999999997 3555699999999999999999999999999999999999999999
Q ss_pred hhhhcCcCCCCccc
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~ 329 (1566)
.+||+|||||++..
T Consensus 256 ~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 256 VLKIADFGLARFYT 269 (560)
T ss_pred CEEeccccceeecc
Confidence 79999999999644
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-41 Score=365.17 Aligned_cols=149 Identities=23% Similarity=0.302 Sum_probs=134.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|..++.||+|+||.||+|++ .++|+.||||+++.++.... +..+++|||..|+.++||||+.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d------~~t~~~VAIKKIkl~~~kdG--------i~~talREIK~Lqel~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARD------TETGKRVAIKKIKLGNAKDG--------INRTALREIKLLQELKHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEe------cCCCcEEEEEEeeccccccC--------ccHHHHHHHHHHHHccCcchhhhh
Confidence 4799999999999999999997 47899999999987643322 123567999999999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++|...+.+.||+||++.+|+.+|+. +...++..+++.|+.|+++|++|||++.|+||||||.|+||+++| .+||+|
T Consensus 68 D~F~~~~~l~lVfEfm~tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g--~lKiAD 144 (318)
T KOG0659|consen 68 DVFPHKSNLSLVFEFMPTDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG--QLKIAD 144 (318)
T ss_pred hhccCCCceEEEEEeccccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC--cEEeec
Confidence 99999999999999999999999984 566789999999999999999999999999999999999999999 899999
Q ss_pred cCCCCc
Q 000399 322 KPLVGF 327 (1566)
Q Consensus 322 FGlA~~ 327 (1566)
||+||.
T Consensus 145 FGLAr~ 150 (318)
T KOG0659|consen 145 FGLARF 150 (318)
T ss_pred ccchhc
Confidence 999995
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=372.93 Aligned_cols=158 Identities=23% Similarity=0.200 Sum_probs=140.2
Q ss_pred cchhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccC
Q 000399 155 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH 234 (1566)
Q Consensus 155 ~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H 234 (1566)
+..++.++.|+.+..|++|+||.||+|+++ .++.+||+|.++.++.. . =++++.+|||.+|.+++|
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk------~t~eIVALKr~kmekek-~-------GFPItsLREIniLl~~~H 134 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDK------KTDEIVALKRLKMEKEK-E-------GFPITSLREINILLKARH 134 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccC------CcceeEEeeeccccccc-C-------CCcchhHHHHHHHHhcCC
Confidence 556777899999999999999999999985 68999999999875421 1 146778999999999999
Q ss_pred CCccccccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 235 PNVAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 235 pNIV~l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
||||.+-.+.... +.+|||||||+.+|..++...+ .+|...+++.++.|+++|++|||++.|+||||||+|+|++..
T Consensus 135 ~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 135 PNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK 213 (419)
T ss_pred CCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC
Confidence 9999999988655 5899999999999999998654 578999999999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCccc
Q 000399 313 CWSWLYICDKPLVGFNS 329 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~ 329 (1566)
| .+||+|||+||...
T Consensus 214 G--~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 214 G--ILKIADFGLAREYG 228 (419)
T ss_pred C--cEEecccchhhhhc
Confidence 9 79999999999533
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-41 Score=386.33 Aligned_cols=154 Identities=22% Similarity=0.258 Sum_probs=137.7
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCC
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPN 236 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpN 236 (1566)
....++|.++++||.|+||.||+|+.+ +++..||||.+++.-.. ..+..+ +||+..|++|+ |||
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~------~~~~~VAIK~MK~Kf~s---~ee~~n------LREvksL~kln~hpn 70 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSK------ETGELVAIKKMKKKFYS---WEECMN------LREVKSLRKLNPHPN 70 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeec------CCCceeeHHHHHhhhcc---HHHHHH------HHHHHHHHhcCCCCc
Confidence 345789999999999999999999864 68888999999876544 334443 58999999998 999
Q ss_pred cccccccccccC-ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~-~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
||++.+++.+.+ .+|+|||||+.+|+++++.+ +..|++..++.|++||++||+|+|.+|+.|||+||||||+....
T Consensus 71 iikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~-- 147 (538)
T KOG0661|consen 71 IIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGND-- 147 (538)
T ss_pred chhhHHHhhccCceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccc--
Confidence 999999999988 99999999999999999975 77899999999999999999999999999999999999999766
Q ss_pred hhhhcCcCCCCccc
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~ 329 (1566)
.+||+|||+||...
T Consensus 148 ~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 148 VIKIADFGLAREVR 161 (538)
T ss_pred eeEecccccccccc
Confidence 69999999999654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=393.38 Aligned_cols=172 Identities=18% Similarity=0.232 Sum_probs=149.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|+..+.||+|+|+.||++++ ..+|..||+|++.+....+...++-+. +||+|.+.|+|||||+++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~------~~tge~~A~KvVpk~~l~k~~~reKv~-------~EIeIHr~L~HpnIV~f~ 84 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARD------LDTGEVVAVKVVPKKLLKKPKQREKVL-------NEIEIHRSLKHPNIVQFY 84 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEE------cCCCcEEEEEEeehHHhcCcchHHHHH-------HHHHHHHhcCCCcEEeee
Confidence 5799999999999999999886 478999999999987666665555554 799999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++|++++++|||+|+|.. +|..+++ .++.++|.+++++++||+.||.|||+++|||||||..||+|+++. +|||+
T Consensus 85 ~~FEDs~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~--~VKIg 160 (592)
T KOG0575|consen 85 HFFEDSNNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM--NVKIG 160 (592)
T ss_pred eEeecCCceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC--cEEec
Confidence 999999999999999996 9999998 567899999999999999999999999999999999999999998 69999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
|||||.......+ ..+ +.+|||-|.|||++
T Consensus 161 DFGLAt~le~~~E-----rk~------TlCGTPNYIAPEVl 190 (592)
T KOG0575|consen 161 DFGLATQLEYDGE-----RKK------TLCGTPNYIAPEVL 190 (592)
T ss_pred ccceeeeecCccc-----ccc------eecCCCcccChhHh
Confidence 9999987653111 111 22488888888775
|
|
| >KOG1787 consensus Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=417.59 Aligned_cols=240 Identities=34% Similarity=0.501 Sum_probs=201.7
Q ss_pred hccccccccccCCchhhhHHHhhcccccCCccceeecceeE-eeccC-CCCCCCcccccccccccccccCCcc-eeeeee
Q 000399 368 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQ-LDFTYS 444 (1566)
Q Consensus 368 ~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~-~~~~~~ 444 (1566)
..+..|..++++||+|+|.+|..+||++||++|||||||++ ||.+. .|.+.+.+||||+||+|++|..... +..+|.
T Consensus 470 ~~t~~w~~~~~s~~~~l~~l~t~agrsyndl~qypvfpwvl~dy~s~~ld~s~~~~frdlsKpigaln~~~~~~f~dry~ 549 (1126)
T KOG1787|consen 470 GITQEWQAREISNFEVLMQLNTSAGRSYNDLTQYPVFPWVLRDYSSETLDLSKLSTFRDLSKPIGALNPKRAYLFRDRYE 549 (1126)
T ss_pred CccHHHHhhccccHHHHHHHHhccCcccCccccCCCCCeeeecccchhhhcccchhHHhhcCcccCCCcccchhHhhhhh
Confidence 46789999999999999999999999999999999999999 77664 5889999999999999999875433 445666
Q ss_pred cCC----CCccccHhhhhhhccccccccccchhHHHHhhhhc--cCCCCCchhhhhhh------ccCCCCccCccccCcc
Q 000399 445 SSE----IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLY------QWTPDECIPEFYCDPQ 512 (1566)
Q Consensus 445 ~~~----~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~------~~~~~EliPEff~~p~ 512 (1566)
+.+ ..+||++||++...+.+|++|.+||++++++.+.+ +.+.+-+++..+-+ ..|++|+||||||.||
T Consensus 550 s~~D~~i~~~~~~thys~~~~~l~~l~rvepf~S~~~~l~~gkfd~~dr~~~sv~~~~r~~l~d~sdvkelipeffy~p~ 629 (1126)
T KOG1787|consen 550 SFEDQAIPSFHYGTHYSSAANVLAYLLRVEPFTSLHLQLQDGKFDHADRAFSSVASSWRRCLRDTSDVKELIPEFFYFPE 629 (1126)
T ss_pred ccccccccccccccccccccceeeeeeecCccccccccccccccccchhhHHHHHHHHhhhccchhhHHHhhhHHHHHHH
Confidence 543 34799999999999999999999999999887753 33333333332222 2478999999999999
Q ss_pred hhhccC----------CCCcccccCCCCCChHHHHHHhhhhhcccccceeeeeeEEeeeecccccccccccccccccCCC
Q 000399 513 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 582 (1566)
Q Consensus 513 ~~~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDLifG~kq~g~~a~~a~Nvf~~~~~ 582 (1566)
+|.|.+ ++|.||.|||||++|++|+..||+||||+|||.++|.||||||||||+|.+|+.|.|||+..+|
T Consensus 630 ll~~~~~~~lg~~~dg~~vi~v~lppwa~~pe~f~~~nr~aLes~fvs~~l~~widlifg~Kq~g~ea~~a~nvf~~~ty 709 (1126)
T KOG1787|consen 630 LLVNSNLYNLGVRVDGEPVIDVVLPPWAKSPEDFETRNREALESEFVSCQLHQWIDLIFGYKQRGPEAVRAMNVFYYLTY 709 (1126)
T ss_pred HHhccccccceeecCCccceeeecccccCCHHHHHHHHHHHhhccccccccchhHHhhhhHhhcCHHHHHhhhhhccCCc
Confidence 999763 4689999999999999999999999999999999999999999999999999999999998875
Q ss_pred CCC-------------------Ccccc--ccccccCCCCccccccc
Q 000399 583 PTK-------------------PKSVG--RLQLFTQPHPVRQTATW 607 (1566)
Q Consensus 583 ~~~-------------------~~~~g--~~qlF~~pHp~r~~~~~ 607 (1566)
... ...+| |.|+|.++||+|.....
T Consensus 710 eG~v~~~~~~d~~~~~eai~~~i~~f~~~~~~~~~e~~~~~~~~~~ 755 (1126)
T KOG1787|consen 710 EGAVDLDSITDQVLRTEAIEAQIASFGQTPSQLLQEQHPPRASESK 755 (1126)
T ss_pred cccccccccCChhHHHHHHHHHHhhccccchhhhhhccCCcchhcc
Confidence 310 11345 79999999999988766
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=369.61 Aligned_cols=152 Identities=23% Similarity=0.373 Sum_probs=130.6
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
....|..++.||+|+||.|..+.++ .+|..||||++..........+ +++||+.+|+.++|+||+.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~------~t~~~VAIKKi~~~F~~~~~ak--------RtlRElklLr~~~HeNIi~ 85 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDK------RTGEKVAIKKILNPFENQIDAK--------RTLRELKLLRHLRHENIIG 85 (359)
T ss_pred ccceecccccccCcceeeEEEEEEc------CCCCEeehhhhhhhhhchHHHH--------HHHHHHHHHHHhcCCCcce
Confidence 3456777899999999999998874 6789999999875433333333 4458999999999999999
Q ss_pred cccccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 240 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 240 l~~~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+++++..+ ..+|+|+|+|+.+|..+|+ .+..+++.+++++++||++||+|+|+.+|+||||||+|+|++.++
T Consensus 86 l~di~~p~~~~~f~DvYiV~elMetDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c- 162 (359)
T KOG0660|consen 86 LLDIFRPPSRDKFNDVYLVFELMETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC- 162 (359)
T ss_pred EEeecccccccccceeEEehhHHhhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC-
Confidence 99999762 4899999999999999998 344489999999999999999999999999999999999999999
Q ss_pred hhhhhcCcCCCCccc
Q 000399 315 SWLYICDKPLVGFNS 329 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~ 329 (1566)
.+||||||+||...
T Consensus 163 -~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 163 -DLKICDFGLARYLD 176 (359)
T ss_pred -CEEeccccceeecc
Confidence 79999999999543
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=375.56 Aligned_cols=149 Identities=16% Similarity=0.240 Sum_probs=138.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+||+|+.+ .+|.++|+|++++......+..+.++ .|-.+|...++|+||+|
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk------~Tg~iyAmK~LkKS~M~~~~Qv~hV~-------aERdiL~~~ds~~vVKL 206 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKK------DTGEIYAMKILKKSEMLKKNQVEHVR-------AERDILAEVDSPWVVKL 206 (550)
T ss_pred cccchhheeeccccceeEEEEEEc------cCCcEEeeecccHHHHHhhhhHHHHH-------HHHHHhhhcCCCcEEEE
Confidence 679999999999999999999853 68999999999998877766666665 79999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
|..|++.+++||||||++| ++..+|. +.+.+++.++++|+.+++.|++.+|..|+|||||||+|+|||..| ++||
T Consensus 207 yYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G--HiKL 282 (550)
T KOG0605|consen 207 YYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG--HIKL 282 (550)
T ss_pred EEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC--CEee
Confidence 9999999999999999997 9999998 567799999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCC
Q 000399 320 CDKPLVG 326 (1566)
Q Consensus 320 ~DFGlA~ 326 (1566)
+||||++
T Consensus 283 SDFGLs~ 289 (550)
T KOG0605|consen 283 SDFGLST 289 (550)
T ss_pred ccccccc
Confidence 9999995
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-39 Score=363.47 Aligned_cols=170 Identities=18% Similarity=0.226 Sum_probs=145.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+.+.++.||+|+.|+||+++|+ .+++.+|+|++..+ ......++.+ ||+++++.++|||||.+
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk------~t~~i~AlK~I~~~-~~~~~~~Qi~--------rEl~il~~~~spyIV~~ 142 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHK------PTGKIYALKVILLN-IDPALQKQIL--------RELEILRSCQSPYIVGF 142 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEc------CCCeEEEEEeeccc-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 457889999999999999999985 68999999999442 3334444455 69999999999999999
Q ss_pred cccccccCc-eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGL-ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~-l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
||+|..++. ++|+||||++ +|+++++. .+.++|..+..++.||++||.|||+ ++||||||||+|||++..| .|
T Consensus 143 ygaF~~~~~~isI~mEYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--eV 218 (364)
T KOG0581|consen 143 YGAFYSNGEEISICMEYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--EV 218 (364)
T ss_pred eEEEEeCCceEEeehhhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC--CE
Confidence 999999995 9999999997 99999984 4668999999999999999999996 9999999999999999999 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
||||||.++..... .+.+++||..|||||.+.
T Consensus 219 KicDFGVS~~lvnS-------------~a~tfvGT~~YMsPERi~ 250 (364)
T KOG0581|consen 219 KICDFGVSGILVNS-------------IANTFVGTSAYMSPERIS 250 (364)
T ss_pred EeccccccHHhhhh-------------hcccccccccccChhhhc
Confidence 99999999864420 234567888899887754
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=363.12 Aligned_cols=171 Identities=26% Similarity=0.309 Sum_probs=147.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|.+.+.||+|+||.||||+++ .+...||+|.+.+......+.+... +|++|++.++|||||.++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK------~t~~~vAik~i~K~gr~~k~l~~l~--------~ev~i~r~lkHpniv~m~ 67 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRK------YTIQVVAIKFIDKSGRNEKELKNLR--------QEVRILRSLKHPNIVEML 67 (808)
T ss_pred cchhHHHHhcCCccceeeecccc------cceeEEEEEEehhcCCchHHHHHHH--------HHHHHHHhcCCcchhhHH
Confidence 57999999999999999999975 4889999999998766665555555 599999999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++|++..++|+|+|||.|+|+.+|. ..+.++|..++.+++|++.||.|||+.+|+|||+||.|||++.++ ++|+||
T Consensus 68 esfEt~~~~~vVte~a~g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~--~~Klcd 143 (808)
T KOG0597|consen 68 ESFETSAHLWVVTEYAVGDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG--TLKLCD 143 (808)
T ss_pred HhhcccceEEEEehhhhhhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC--ceeech
Confidence 9999999999999999999999998 456689999999999999999999999999999999999999999 899999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
||+||..... ....+...|||.|||||+.
T Consensus 144 Fg~Ar~m~~~-----------t~vltsikGtPlYmAPElv 172 (808)
T KOG0597|consen 144 FGLARAMSTN-----------TSVLTSIKGTPLYMAPELV 172 (808)
T ss_pred hhhhhhcccC-----------ceeeeeccCcccccCHHHH
Confidence 9999964420 0112334577777777654
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=328.48 Aligned_cols=155 Identities=19% Similarity=0.205 Sum_probs=133.9
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
...+.|++-+.||+|.|+.|+++.+. .+|+.+|+|+++..+....+.++.- ||++|.+.|+|||||
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~------~tg~~fa~kiin~~k~~~~~~e~l~--------rEarIC~~LqHP~Iv 73 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHK------TTGLEFAAKIINTKKLSARDFQKLE--------REARICRKLQHPNIV 73 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhc------cchHHHHHHHhhhhhhccccHHHHH--------HHHHHHHhcCCCcEe
Confidence 34578999999999999999999974 7899999999998777766554444 699999999999999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 316 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~ 316 (1566)
+|++.+...+..|||+|++.| +|..-|- .+..++|..+..+++||+.||.|||.+||||||+||+|+|+..... .-
T Consensus 74 rL~~ti~~~~~~ylvFe~m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~ 151 (355)
T KOG0033|consen 74 RLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAA 151 (355)
T ss_pred ehhhhhcccceeEEEEecccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCc
Confidence 999999999999999999998 7765554 2356799999999999999999999999999999999999976543 36
Q ss_pred hhhcCcCCCCccc
Q 000399 317 LYICDKPLVGFNS 329 (1566)
Q Consensus 317 vKL~DFGlA~~~~ 329 (1566)
+||+|||+|....
T Consensus 152 vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 152 VKLADFGLAIEVN 164 (355)
T ss_pred eeecccceEEEeC
Confidence 9999999998544
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=363.01 Aligned_cols=151 Identities=18% Similarity=0.208 Sum_probs=133.8
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++-|++++.||+|+.|.|.+|++. ++|+..|||++.+.....+....-+ -||+-+|+.+.||||++
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~------~TGqlaaiKii~k~~~~s~s~~~~I-------erEIviMkLi~HpnVl~ 76 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHA------ETGQLAAIKIIPKRSELSSSQPAGI-------EREIVIMKLIEHPNVLR 76 (786)
T ss_pred cccceeccccccCCCCceehhhhcc------cccceeEEEeeccccccccccccch-------hhhhHHHHHhcCCCeee
Confidence 3567999999999999999999984 7999999999988632222222222 28999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+|++++++.++|+|+||++| .|++++. .++++++.++..+++||+.|+.|||..+|+||||||+|+||+..+ .+|
T Consensus 77 LydVwe~~~~lylvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--nIK 152 (786)
T KOG0588|consen 77 LYDVWENKQHLYLVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--NIK 152 (786)
T ss_pred eeeeeccCceEEEEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--CEe
Confidence 99999999999999999996 9999998 567899999999999999999999999999999999999999999 599
Q ss_pred hcCcCCCCc
Q 000399 319 ICDKPLVGF 327 (1566)
Q Consensus 319 L~DFGlA~~ 327 (1566)
|+|||+|..
T Consensus 153 IADFGMAsL 161 (786)
T KOG0588|consen 153 IADFGMASL 161 (786)
T ss_pred eeccceeec
Confidence 999999974
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=352.78 Aligned_cols=203 Identities=22% Similarity=0.275 Sum_probs=176.7
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|...+.||+|+||+||+|+++ .++..||||.+.+.+......+... .|+.+|+.++|||||+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~------~~~~~VAIK~i~~~~l~~k~~e~L~--------~Ei~iLkel~H~nIV~ 73 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHK------KSGTEVAIKCIAKKKLNKKLVELLL--------SEIKILKELKHPNIVR 73 (429)
T ss_pred ccccceehhhccCcceEEEEEeEec------cCCceEEeeeehhhccCHHHHHHHH--------HHHHHHHhcCCcceee
Confidence 4678999999999999999999985 5779999999988765443333233 6999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc-ch---
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW--- 314 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~-~~--- 314 (1566)
|++++++++.+|||||||.| +|.++|+ ..+.+++..++.++.||+.||++||+++||||||||+||||+.. +.
T Consensus 74 l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~ 151 (429)
T KOG0595|consen 74 LLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTS 151 (429)
T ss_pred EEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCC
Confidence 99999999999999999996 9999998 45578999999999999999999999999999999999999986 32
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
..+||+|||+||.... +.+..+.+|+|.|||||++....|+.+.|.|+.|.| .+..+.|++
T Consensus 152 ~~LKIADFGfAR~L~~------------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~I-------lyq~l~g~~ 212 (429)
T KOG0595|consen 152 PVLKIADFGFARFLQP------------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTI-------LYQCLTGKP 212 (429)
T ss_pred ceEEecccchhhhCCc------------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHH-------HHHHHhCCC
Confidence 3689999999997662 123345569999999999999999999999999998 888888988
Q ss_pred cCC
Q 000399 395 WGD 397 (1566)
Q Consensus 395 ~~d 397 (1566)
+.+
T Consensus 213 Pf~ 215 (429)
T KOG0595|consen 213 PFD 215 (429)
T ss_pred Ccc
Confidence 755
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=345.14 Aligned_cols=146 Identities=25% Similarity=0.354 Sum_probs=125.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|+-.+.+|.|+||.||+|.. .+++..+|||.+..++... + +|+++|+.++|||||+|..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~------~e~~~~vAIKKv~~d~r~k-------n-------rEl~im~~l~HpNIV~L~~ 84 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKL------RETEEEVAIKKVLQDKRYK-------N-------RELQIMRKLDHPNIVRLLY 84 (364)
T ss_pred EEEeeEEEeecccceEEEEEE------cCCCceeEEEEecCCCCcC-------c-------HHHHHHHhcCCcCeeeEEE
Confidence 688899999999999999885 3568999999987654432 3 7999999999999999998
Q ss_pred cccccC-----ceeeeccCCccchhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 243 LLKTSG-----LITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 243 ~~~~~~-----~l~LV~E~~~gsL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
+|.... .+.+||||+|.+|.++++. ..+..++.-+++.|++||++||.|||+.||+||||||+|||+|.+..
T Consensus 85 ~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg- 163 (364)
T KOG0658|consen 85 FFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTG- 163 (364)
T ss_pred EEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCC-
Confidence 885432 6789999999999999984 22455788899999999999999999999999999999999999853
Q ss_pred hhhhcCcCCCCccc
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~ 329 (1566)
.+||||||.|+...
T Consensus 164 ~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 164 VLKICDFGSAKVLV 177 (364)
T ss_pred eEEeccCCcceeec
Confidence 89999999998543
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=343.67 Aligned_cols=151 Identities=23% Similarity=0.261 Sum_probs=132.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC-ccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN-VAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN-IV~ 239 (1566)
...|+.+++||+|+||+||+|+++ .+|..||+|++...... ++ ++.+++||+.+|+.++|+| ||+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~------~~g~~VALKkirl~~~~-EG-------~P~taiREisllk~L~~~~~iv~ 75 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSK------RTGKFVALKKIRLEFEE-EG-------VPSTAIREISLLKRLSHANHIVR 75 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEe------cCCCEEEEEEEeccccc-cC-------CCchhhHHHHHHHHhCCCcceEE
Confidence 567999999999999999999974 57899999999865432 11 2446689999999999999 999
Q ss_pred ccccccccC------ceeeeccCCccchhhhhccCcc--cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPN--ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 240 l~~~~~~~~------~l~LV~E~~~gsL~~~l~~~~~--~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
|++++.+.+ .+++|+||++.+|..++...+. ..++...++.+++||+.||+|||+++|+||||||+||||++
T Consensus 76 L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 76 LHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS 155 (323)
T ss_pred EEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC
Confidence 999998877 8999999999999999986543 34677889999999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCc
Q 000399 312 SCWSWLYICDKPLVGF 327 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~ 327 (1566)
+| .+||+|||+|+.
T Consensus 156 ~G--~lKlaDFGlAra 169 (323)
T KOG0594|consen 156 SG--VLKLADFGLARA 169 (323)
T ss_pred CC--cEeeeccchHHH
Confidence 99 799999999983
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=362.00 Aligned_cols=173 Identities=16% Similarity=0.135 Sum_probs=144.7
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
..++|+++++||+|+||+|+++..+ .++..+|||+++|+.+...+..+-+. .|.+|+... +||.++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k------~~~e~yAIK~LKK~~Il~~d~Ve~~~-------~EkrI~~la~~HPFL~ 432 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELK------GTNEYYAIKVLKKGDILQRDEVESLM-------CEKRIFELANRHPFLV 432 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEc------CCCcEEEEEEeeccceeccccHHHHH-------HHHHHHHHhccCCeEe
Confidence 4568999999999999999998864 57889999999998877666555544 688887777 499999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
.|+..|++++++|+||||+.| ++..+++ ...+++..+++|+..|+.||.|||++||||||||.+|||||.+| ++
T Consensus 433 ~L~~~fQT~~~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG--h~ 507 (694)
T KOG0694|consen 433 NLFSCFQTKEHLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG--HV 507 (694)
T ss_pred ecccccccCCeEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--cE
Confidence 999999999999999999997 7444443 45699999999999999999999999999999999999999999 89
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
||+|||+++....... ...+++|||.|||||++
T Consensus 508 kiADFGlcKe~m~~g~-----------~TsTfCGTpey~aPEil 540 (694)
T KOG0694|consen 508 KIADFGLCKEGMGQGD-----------RTSTFCGTPEFLAPEVL 540 (694)
T ss_pred EecccccccccCCCCC-----------ccccccCChhhcChhhh
Confidence 9999999996542111 12344588888887764
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=354.95 Aligned_cols=174 Identities=22% Similarity=0.227 Sum_probs=145.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc--cccchhhhcCCCCCCCCCCCCccc-CCCc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCLR-HPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~--~~~~~l~~~g~~~~rEi~iL~~l~-HpNI 237 (1566)
.++|++.+.||+|+||.|+.|++. .++..||+|++.+...... ...+.+. ||+.+++.++ ||||
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~------~t~~~vAiKii~~~~~~~~~~~~~~~i~-------rEi~~~~~~~~HpnI 82 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHR------LTGEKVAIKIIDRKKVSSKSQKLDELIK-------REISILRRLRSHPNI 82 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeec------cCCCeEEEEEechhcccccccccchhhH-------HHHHHHHHhccCCCE
Confidence 568999999999999999999874 5679999997776533212 2233333 7999999999 9999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc-chh
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CWS 315 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~-~~~ 315 (1566)
+++++++.+...+|+||||+.| +|.+++.. .+.+.|..++.+++|+++|++|||++||+||||||+|||++.+ +
T Consensus 83 ~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~-- 158 (370)
T KOG0583|consen 83 IRLLEVFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG-- 158 (370)
T ss_pred eEEEEEEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC--
Confidence 9999999999999999999997 99999984 6678999999999999999999999999999999999999999 7
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
.+||+|||++..... ......+++||+.|+|||++.
T Consensus 159 ~~Kl~DFG~s~~~~~-----------~~~~l~t~cGsp~Y~aPEvl~ 194 (370)
T KOG0583|consen 159 NLKLSDFGLSAISPG-----------EDGLLKTFCGSPAYAAPEVLS 194 (370)
T ss_pred CEEEeccccccccCC-----------CCCcccCCCCCcccCCHHHhC
Confidence 699999999986520 001223445888888888764
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=348.27 Aligned_cols=253 Identities=18% Similarity=0.182 Sum_probs=213.7
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCC
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPN 236 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpN 236 (1566)
.+...+|.+++.||+|+|++|++|+++ .+++.||||++.+.-+..+....++. +|-.+|..| .||.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~------~t~keYAiKVl~K~~Iike~KvkYV~-------~Ek~~l~~L~~hPg 135 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREK------ATGKEYAIKVLDKRYIIKEKKVKYVT-------REKEALTQLSGHPG 135 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeec------CCCceeeHhhhhHHHHHhhcccchhh-------HHHHHHHHhhCCCC
Confidence 344679999999999999999999974 68999999999998888887778887 899999999 7999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
||+||..|+++..+|+|+||+++ +|.++|+ +.+.+.+..+|+|+.||+.||+|||++|||||||||+||||+.++
T Consensus 136 ivkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm-- 211 (604)
T KOG0592|consen 136 IVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG-- 211 (604)
T ss_pred eEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC--
Confidence 99999999999999999999996 9999998 567799999999999999999999999999999999999999999
Q ss_pred hhhhcCcCCCCccccccccCC--CCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 316 WLYICDKPLVGFNSIADWCTI--PTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~--~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
++||+|||.|+.......... ............++||..|.+||++....-+..+|+|..||| .+-+++|.
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCi-------lyQmlaG~ 284 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCI-------LYQMLAGQ 284 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHH-------HHHHhcCC
Confidence 899999999997664222110 001001111256889999999999999999999999999999 88999998
Q ss_pred c-cCCccceeecceeEeeccCCCCCCCccccccccccccccc
Q 000399 394 R-WGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAK 434 (1566)
Q Consensus 394 s-~~dl~q~pv~pwv~d~~~~~~~~~~~~~rdLskp~~~l~~ 434 (1566)
+ |.+-++|-+|.-|++..-......|...|||.+-+.+...
T Consensus 285 PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp 326 (604)
T KOG0592|consen 285 PPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDP 326 (604)
T ss_pred CCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCc
Confidence 8 6889999999999844333344566888888877665544
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=337.04 Aligned_cols=201 Identities=18% Similarity=0.215 Sum_probs=178.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+||.++.+ .+++.+|+|++++..+......+... +|..||..++||+||.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~------dt~kiYAmKvl~K~~iv~~~e~~~~~-------~Er~IL~~v~hPFiv~l 90 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKK------DTGKIYAMKVLKKKKIVEKKEVRHTK-------AERNILSKIKHPFIVKL 90 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEc------ccCceeehhhhhhhHhhhhhhHHHHH-------HHHHHHHhCCCCcEeee
Confidence 578999999999999999998863 78999999999998877664444443 79999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+..|++.+.+|||+||+.| +|+..|+ +.+.+++..+++|+.+|+.||.|||++|||||||||+||||+.+| +++|
T Consensus 91 ~ysFQt~~kLylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--Hi~L 166 (357)
T KOG0598|consen 91 IYSFQTEEKLYLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--HIKL 166 (357)
T ss_pred EEecccCCeEEEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--cEEE
Confidence 9999999999999999997 9999998 567799999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccC
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~ 396 (1566)
+|||+++....... ...+++||+.|||||++.+..|+..+|+|+.|.+ ++.++.|.++.
T Consensus 167 tDFgL~k~~~~~~~-----------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGil-------lYeML~G~pPF 225 (357)
T KOG0598|consen 167 TDFGLCKEDLKDGD-----------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGIL-------LYEMLTGKPPF 225 (357)
T ss_pred eccccchhcccCCC-----------ccccccCCccccChHHHhcCCCCcccchHhHHHH-------HHHHhhCCCCC
Confidence 99999996553111 1123569999999999999999999999999987 78888887753
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=319.18 Aligned_cols=267 Identities=18% Similarity=0.211 Sum_probs=219.4
Q ss_pred ccccccccccchHHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee--eehhhhhccCcceee
Q 000399 1258 PQRRVYDYHKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS--ILSSIRAHHGALRSV 1333 (1566)
Q Consensus 1258 ~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~--~l~tl~gH~~~V~sl 1333 (1566)
...|++|+......- +.-.|..||.| .||||++ ||||+.||+|++||.+++ .-..++||...|+++
T Consensus 137 ~TvR~WD~~TeTp~~-----t~KgH~~WVlcvawsPDgk~-----iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~L 206 (480)
T KOG0271|consen 137 TTVRLWDLDTETPLF-----TCKGHKNWVLCVAWSPDGKK-----IASGSKDGSIRLWDPKTGQQIGRALRGHKKWITAL 206 (480)
T ss_pred ceEEeeccCCCCcce-----eecCCccEEEEEEECCCcch-----hhccccCCeEEEecCCCCCcccccccCcccceeEE
Confidence 456777776554433 33459999999 7999999 999999999999999876 568899999999999
Q ss_pred eecC-----cceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEE
Q 000399 1334 AVGQ-----DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLL 1406 (1566)
Q Consensus 1334 afsp-----d~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l 1406 (1566)
+|.| ...+|+|+|+ ||+|+|||+..+.|+.++.||+.+|+||+|-. .++|.|+ |++|++|+...|++.
T Consensus 207 awep~hl~p~~r~las~sk----Dg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG-~gliySgS~DrtIkvw~a~dG~~~ 281 (480)
T KOG0271|consen 207 AWEPLHLVPPCRRLASSSK----DGSVRIWDTKLGTCVRTLSGHTASVTCVRWGG-EGLIYSGSQDRTIKVWRALDGKLC 281 (480)
T ss_pred eecccccCCCccceecccC----CCCEEEEEccCceEEEEeccCccceEEEEEcC-CceEEecCCCceEEEEEccchhHH
Confidence 9987 5679999998 99999999999999999999999999999743 3466776 999999999999999
Q ss_pred EEeeccccccccc-----------------------------------------------CCCCCcccccccCC--CCCC
Q 000399 1407 SVFAEQSMDSLHG-----------------------------------------------GSPSSSISKINTDQ--VGML 1437 (1566)
Q Consensus 1407 ~~l~~h~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~--~~~~ 1437 (1566)
+++++|...+.+. ++.+....+|.... ....
T Consensus 282 r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~ 361 (480)
T KOG0271|consen 282 RELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPIT 361 (480)
T ss_pred HhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchh
Confidence 9998875442211 11112222333211 2233
Q ss_pred CCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccC
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1566)
Q Consensus 1438 ~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~ 1517 (1566)
...+|..-|+.+.|+|+ +++++++|.|.+||+||-++|+.+.+|+|| -+.|+.|+++
T Consensus 362 rmtgHq~lVn~V~fSPd----------~r~IASaSFDkSVkLW~g~tGk~lasfRGH------v~~VYqvaws------- 418 (480)
T KOG0271|consen 362 RMTGHQALVNHVSFSPD----------GRYIASASFDKSVKLWDGRTGKFLASFRGH------VAAVYQVAWS------- 418 (480)
T ss_pred hhhchhhheeeEEECCC----------ccEEEEeecccceeeeeCCCcchhhhhhhc------cceeEEEEec-------
Confidence 45567777888888876 999999999999999999999999999988 4566777765
Q ss_pred CCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1518 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1518 ~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.|.++|+|||.|.++++||+++.++...+.||...|.+|.|+|||
T Consensus 419 ----aDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG 463 (480)
T KOG0271|consen 419 ----ADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDG 463 (480)
T ss_pred ----cCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCC
Confidence 556799999999999999999999999999999999999999998
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=326.25 Aligned_cols=239 Identities=22% Similarity=0.217 Sum_probs=197.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+.++.||.|+||.|.+++++ .++..+|+|++.+.+.......+... +|..+|+.+.||++++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k------~~g~yYAmKvL~k~~vVklKQveH~~-------nEk~vL~~v~~PFlv~l 109 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREK------HSGNYYAMKVLDKQKVVKLKQVEHTH-------NEKRVLKAVSHPFLVKL 109 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEc------cCCceeehhhcCHHHHHHHHHHHHHh-------hHHHHHhhccCceeEEE
Confidence 578999999999999999999875 67999999999998777665556655 89999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.|.+.+++||||||++| .|+.+++ +.+.+++..+++|+.||+.||+|||+++|++|||||+|||||.+| ++||
T Consensus 110 ~~t~~d~~~lymvmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--~iKi 185 (355)
T KOG0616|consen 110 YGTFKDNSNLYMVMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--HIKI 185 (355)
T ss_pred EEeeccCCeEEEEEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC--cEEE
Confidence 9999999999999999997 9999999 456699999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc-CCc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW-GDY 398 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~-~dl 398 (1566)
+|||+|+...+ .+. +.+|||.|+|||++..++|...+|+|..|++ .+++++|.++ .+-
T Consensus 186 tDFGFAK~v~~-------rT~-------TlCGTPeYLAPEii~sk~ynkavDWWalGVL-------IYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 186 TDFGFAKRVSG-------RTW-------TLCGTPEYLAPEIIQSKGYNKAVDWWALGVL-------IYEMLAGYPPFYDD 244 (355)
T ss_pred EeccceEEecC-------cEE-------EecCCccccChHHhhcCCCCcchhHHHHHHH-------HHHHHcCCCCCcCC
Confidence 99999997663 112 2349999999999999999999999999977 8999999884 444
Q ss_pred cceeecceeE--e--eccCC-----CCCCCcccccccccccccccCCc
Q 000399 399 TFHMVMPWVI--D--FSTKP-----DENFDSGSRDLSKSKWRLAKGDE 437 (1566)
Q Consensus 399 ~q~pv~pwv~--d--~~~~~-----~~~~~~~~rdLskp~~~l~~~~~ 437 (1566)
+...++.-|+ + |.+.. |+..-..-+|++|..|.+..|.+
T Consensus 245 ~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~ 292 (355)
T KOG0616|consen 245 NPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVE 292 (355)
T ss_pred ChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCcc
Confidence 4333333333 1 11110 22223445677777777665544
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=334.51 Aligned_cols=162 Identities=21% Similarity=0.193 Sum_probs=129.9
Q ss_pred chhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcC----CCCCCCCCCCCc
Q 000399 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIG----VPSFDESSVPGC 231 (1566)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g----~~~~rEi~iL~~ 231 (1566)
......++|++++.||+|.||.|-+|++ ..+++.||||++.+.+...+.........+ ....+||.||++
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~------~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk 164 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARD------EVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK 164 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEee------cCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh
Confidence 3345577999999999999999999997 368999999999886543322110000000 012479999999
Q ss_pred ccCCCccccccccccc--CceeeeccCCcc-chhhhhccCcccc-cchhHHHHHHHHHHHHHHHHhhccccCCCccCCCc
Q 000399 232 LRHPNVAPVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNAL-KSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1566)
Q Consensus 232 l~HpNIV~l~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~-l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NI 307 (1566)
|+|||||+|+++..+. +.+|||+|||.. .+...= ..++ +++.+++.|++.++.||+|||.+|||||||||+|+
T Consensus 165 l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNL 241 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNL 241 (576)
T ss_pred cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhhe
Confidence 9999999999999765 599999999974 443332 3444 89999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCcCCCCcc
Q 000399 308 LLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 308 Ll~~~~~~~vKL~DFGlA~~~ 328 (1566)
||+++| ++||+|||.+...
T Consensus 242 Ll~~~g--~VKIsDFGVs~~~ 260 (576)
T KOG0585|consen 242 LLSSDG--TVKISDFGVSNEF 260 (576)
T ss_pred EEcCCC--cEEeeccceeeec
Confidence 999999 8999999998754
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=333.08 Aligned_cols=150 Identities=21% Similarity=0.217 Sum_probs=127.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|...+.||+|+||.||++.+. .++...|||.+....... .+-+. +|+.+|.+++|||||++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~------~~g~~~AvK~v~~~~~~~---~~~l~-------~Ei~iL~~l~~p~IV~~ 79 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNK------KTGELMAVKSVELEDSPT---SESLE-------REIRILSRLNHPNIVQY 79 (313)
T ss_pred cchhhhhccccCccceEEEEEEec------CCCcceeeeeeecccchh---HHHHH-------HHHHHHHhCCCCCEEee
Confidence 346889999999999999998863 458999999987652111 22222 79999999999999999
Q ss_pred cccccccC--ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc-cchhh
Q 000399 241 LGLLKTSG--LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSW 316 (1566)
Q Consensus 241 ~~~~~~~~--~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~-~~~~~ 316 (1566)
+|...... .+++.|||+++ +|.+++..... .+++..++.+.+||+.||.|||++|||||||||+|||++. ++ .
T Consensus 80 ~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~--~ 156 (313)
T KOG0198|consen 80 YGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG--D 156 (313)
T ss_pred CCccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC--e
Confidence 99865555 69999999997 99999985444 6899999999999999999999999999999999999999 56 6
Q ss_pred hhhcCcCCCCccc
Q 000399 317 LYICDKPLVGFNS 329 (1566)
Q Consensus 317 vKL~DFGlA~~~~ 329 (1566)
+||+|||+++...
T Consensus 157 ~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 157 VKLADFGLAKKLE 169 (313)
T ss_pred EEeccCccccccc
Confidence 9999999998544
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.6e-34 Score=312.23 Aligned_cols=161 Identities=18% Similarity=0.196 Sum_probs=131.4
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.....|+.+..||+|+||.||+|..+. +.....+.+|||.++..+.. .+. ..+++||+.+++.++||||+
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~--~n~kr~k~yAiKkfk~~kd~-tGi-------S~SAcREiaL~REl~h~nvi 90 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKN--TNDKRTKEYAIKKFKGEKDG-TGI-------SMSACREIALLRELKHPNVI 90 (438)
T ss_pred HHHHHhhccceecccccceeeEeeecc--CCcccchhhHHHHHhccCCC-CCc-------CHHHHHHHHHHHHhcCCcch
Confidence 345689999999999999999996432 21122558999998765321 111 12457899999999999999
Q ss_pred cccccccc-cCceeeeccCCccchhhhhccCc---ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 239 PVLGLLKT-SGLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 239 ~l~~~~~~-~~~l~LV~E~~~gsL~~~l~~~~---~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
.|..+|.. +..++|++||.+.+|..+|++.. ...++...++.++.||+.|+.|||++-|+||||||.|||+..++.
T Consensus 91 ~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgp 170 (438)
T KOG0666|consen 91 SLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGP 170 (438)
T ss_pred hHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCC
Confidence 99999987 77999999999999999998633 345788899999999999999999999999999999999998822
Q ss_pred --hhhhhcCcCCCCccc
Q 000399 315 --SWLYICDKPLVGFNS 329 (1566)
Q Consensus 315 --~~vKL~DFGlA~~~~ 329 (1566)
..|||+|||+||...
T Consensus 171 erG~VKIaDlGlaR~~~ 187 (438)
T KOG0666|consen 171 ERGRVKIADLGLARLFN 187 (438)
T ss_pred ccCeeEeecccHHHHhh
Confidence 289999999998533
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-33 Score=321.41 Aligned_cols=153 Identities=20% Similarity=0.243 Sum_probs=137.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|.-|+||+|+.+ .++..+|+|++.+....... +.. ++..|.+||+.++||.++.|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~------~t~~~fAmKVmdK~~l~~rk--Kl~-----Ra~tE~eIL~~lDHPFlPTL 142 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELR------GTNCLFAMKVMDKESLASRK--KLK-----RAQTEREILSLLDHPFLPTL 142 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEec------CCCceEEEEEecHHHHhhhh--HHH-----HHHHHHHHHHhcCCCccchh
Confidence 458999999999999999999863 45699999999987654422 222 33479999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
|+.|+++...|+|||||+| +|..+.+..+.+.+++..+++|+.+|+.||+|||-.|||+|||||+||||-++| +|-|
T Consensus 143 Ya~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredG--HIML 220 (459)
T KOG0610|consen 143 YASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDG--HIML 220 (459)
T ss_pred hheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCC--cEEe
Confidence 9999999999999999997 999999998899999999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCCcc
Q 000399 320 CDKPLVGFN 328 (1566)
Q Consensus 320 ~DFGlA~~~ 328 (1566)
+||-|+...
T Consensus 221 sDFDLS~~~ 229 (459)
T KOG0610|consen 221 SDFDLSLRC 229 (459)
T ss_pred eeccccccC
Confidence 999998754
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-33 Score=306.09 Aligned_cols=176 Identities=18% Similarity=0.201 Sum_probs=146.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc--cccchhhhcCCCCCCCCCCCCcc-cCCCc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~--~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
..+|+.-+.||+|..++|.+|.++ +++..+|+|++........ ...+.+. ...+|+.||+++ .||||
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k------~t~~e~a~kii~~~at~~~~e~~~~~~E----aT~~Ev~ILRqv~GHP~I 85 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHK------ETGKEFAVKIIDVTATTESGETPYEMRE----ATRQEISILRQVMGHPYI 85 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhc------ccccceeEEEEEecccccCCccHHHHHH----HHHHHHHHHHHhcCCCcE
Confidence 457899999999999999999874 6888999999886543222 2222222 446899999999 59999
Q ss_pred ccccccccccCceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++.++|+++..+++|+|.|+ |.|+|+|. ..-.+++...+.+++|+..|+.|||.++||||||||+|||++++. .
T Consensus 86 I~l~D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~--~ 161 (411)
T KOG0599|consen 86 IDLQDVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNM--N 161 (411)
T ss_pred EEeeeeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecccc--c
Confidence 999999999999999999999 59999998 355689999999999999999999999999999999999999999 6
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
+||+|||+|+..... .+ ....+|||.|.|||.+.
T Consensus 162 i~isDFGFa~~l~~G--------ek----LrelCGTPgYLAPEtik 195 (411)
T KOG0599|consen 162 IKISDFGFACQLEPG--------EK----LRELCGTPGYLAPETIK 195 (411)
T ss_pred eEEeccceeeccCCc--------hh----HHHhcCCCcccChhhee
Confidence 999999999976532 11 12235999999998763
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-33 Score=309.03 Aligned_cols=233 Identities=17% Similarity=0.291 Sum_probs=204.6
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
+....|.+.|.+ |||+|.. |+|||.|.++++||+.+. ...+.+||...|.||+|+|||..+|||+. ||
T Consensus 109 sS~~GH~e~Vl~~~fsp~g~~-----l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~----dg 179 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSPTGSR-----LVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSK----DG 179 (480)
T ss_pred cccCCCCCcEEEEEecCCCce-----EEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcccc----CC
Confidence 456679999998 9999998 999999999999999987 78999999999999999999999999999 99
Q ss_pred ceeeEEecccccc-cccccccccccceEEee-----cCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCc
Q 000399 1354 TVQKWELTRINCV-SGYYGHEEVVNDICVLS-----SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1425 (1566)
Q Consensus 1354 tVrlWDl~tg~~i-~tl~gH~~~V~sVafsp-----~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~ 1425 (1566)
+|++||..+|+++ +.+.||...|++++|.| ..+++||+ ||+|+|||+..|+++.++.+|
T Consensus 180 ~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgH------------- 246 (480)
T KOG0271|consen 180 SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGH------------- 246 (480)
T ss_pred eEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccC-------------
Confidence 9999999998765 67999999999999965 56678877 999999999999999988876
Q ss_pred ccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHH
Q 000399 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1505 (1566)
Q Consensus 1426 ~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~ 1505 (1566)
+..|+|+.|-.+ .++++||.|++|++|+...|.+++.+++|. ++|+
T Consensus 247 -----------------T~~VTCvrwGG~-----------gliySgS~DrtIkvw~a~dG~~~r~lkGHa------hwvN 292 (480)
T KOG0271|consen 247 -----------------TASVTCVRWGGE-----------GLIYSGSQDRTIKVWRALDGKLCRELKGHA------HWVN 292 (480)
T ss_pred -----------------ccceEEEEEcCC-----------ceEEecCCCceEEEEEccchhHHHhhcccc------hhee
Confidence 566888888754 499999999999999999999999999884 4445
Q ss_pred Hhhcc-----------CCC---------------------------------------------------------cccC
Q 000399 1506 AICAC-----------GSE---------------------------------------------------------KMQA 1517 (1566)
Q Consensus 1506 sv~~s-----------~~~---------------------------------------------------------~~~~ 1517 (1566)
.++.+ +.+ .+..
T Consensus 293 ~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~ 372 (480)
T KOG0271|consen 293 HLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNH 372 (480)
T ss_pred eeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheee
Confidence 44443 111 0112
Q ss_pred CCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1518 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1518 ~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
..||||+++|||+|-|..|++||.++|+-+.+++||-+.|+.|+|+.|
T Consensus 373 V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaD 420 (480)
T KOG0271|consen 373 VSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSAD 420 (480)
T ss_pred EEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccC
Confidence 338999999999999999999999999999999999999999999987
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.2e-33 Score=320.90 Aligned_cols=155 Identities=15% Similarity=0.170 Sum_probs=135.8
Q ss_pred hhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC
Q 000399 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
..++.+=|.+.+.||+|-|++|-+|++.| +|..||||++.+.+...-....++ +|++.|+.++|||
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVF------TGekVAVKviDKTKlD~~st~hlf--------qEVRCMKLVQHpN 78 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVF------TGEKVAVKVIDKTKLDTLSTGHLF--------QEVRCMKLVQHPN 78 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhc------ccceeEEEEecccccchhhhhHHH--------HHHHHHHHhcCcC
Confidence 33556679999999999999999999965 899999999999887665544444 5999999999999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
||+||++..+...+|||+|+-++ +|+++|.... ..+.+..++.|+.||+.|+.|||...||||||||+|+.+-+.. .
T Consensus 79 iVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl-G 156 (864)
T KOG4717|consen 79 IVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL-G 156 (864)
T ss_pred eeeeeehhcccceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec-C
Confidence 99999999999999999999997 9999998644 4478999999999999999999999999999999998877654 2
Q ss_pred hhhhcCcCCCCc
Q 000399 316 WLYICDKPLVGF 327 (1566)
Q Consensus 316 ~vKL~DFGlA~~ 327 (1566)
-+||+|||++..
T Consensus 157 lVKLTDFGFSNk 168 (864)
T KOG4717|consen 157 LVKLTDFGFSNK 168 (864)
T ss_pred ceEeeecccccc
Confidence 799999998763
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-35 Score=316.85 Aligned_cols=192 Identities=20% Similarity=0.200 Sum_probs=167.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...+|+++++||+|+||+||++.+ +.++..+|.|.+.-+....+.....+ .|+.+|++|+|||||+
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~------~~~g~l~a~K~i~f~~md~k~rq~~v--------~Ei~lLkQL~HpNIVq 82 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQC------LLDGKLVALKKIQFGMMDAKARQDCV--------KEISLLKQLNHPNIVQ 82 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeee------ccCcchhhhhhcchhhccHHHHHHHH--------HHHHHHHhcCCchHHH
Confidence 356899999999999999999986 47999999999987666655555555 5999999999999999
Q ss_pred ccc-cccccCc-eeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhh--cc--ccCCCccCCCcccc
Q 000399 240 VLG-LLKTSGL-ITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHS--LG--IAHRSVCPSNVLLT 310 (1566)
Q Consensus 240 l~~-~~~~~~~-l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~--~g--IiHrDLKp~NILl~ 310 (1566)
+|+ .|.++.. ++||||||++ +|..+|++- .+..++|..++.++.|+|.||.+||. .+ |+||||||.||+|+
T Consensus 83 Yy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~ 162 (375)
T KOG0591|consen 83 YYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT 162 (375)
T ss_pred HHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc
Confidence 999 5655555 9999999995 999999853 34569999999999999999999999 55 99999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.+| .+||.|||++|.... ...+..+.+|||+||+||++.+.+|+.+.|+|+.||+
T Consensus 163 ~~g--vvKLGDfGL~r~l~s-----------~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCl 217 (375)
T KOG0591|consen 163 ANG--VVKLGDFGLGRFLSS-----------KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCL 217 (375)
T ss_pred CCC--ceeeccchhHhHhcc-----------hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHH
Confidence 999 799999999997652 1225567789999999999999999999999999998
|
|
| >KOG1786 consensus Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-33 Score=366.60 Aligned_cols=241 Identities=40% Similarity=0.624 Sum_probs=200.7
Q ss_pred hhhccccccccccCCchhhhHHHhhcccccCCccceeecceeEeec-cC-CCCCCCccccccccccccccc-CCcceeee
Q 000399 366 WHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFS-TK-PDENFDSGSRDLSKSKWRLAK-GDEQLDFT 442 (1566)
Q Consensus 366 y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~d~~-~~-~~~~~~~~~rdLskp~~~l~~-~~~~~~~~ 442 (1566)
..+.+..|..|.++||+|||.+|.++||+++|+.+||||||++++. .. .+..++..+|++.|+++.... +.++....
T Consensus 335 ~~s~~~~W~~~~~~n~~yl~~ln~l~~r~~~~~~~~pi~pw~~~~~~~~~l~~~d~~~~r~~~~~~~~~s~e~~~~~~~r 414 (1081)
T KOG1786|consen 335 LKSAFGRWLSGELENFQYLMHLNTLAGRSIADLAQYPIFPWVLAFYDFSGLDLLDPLTARKLLKLGGHQSDEGYERFAKR 414 (1081)
T ss_pred hhhhhcccccCchhhhhhhhhcCcccccchhhhccCcccceeeccccccchhhcChHhhhhhhhccCCCCHHHHHHHhhh
Confidence 5678899999999999999999999999999999999999999543 33 478899999999999854332 12222333
Q ss_pred eec------CCCCccccHhhhhhhccccccccccchhHHHHhhhhccCCCCCchhhhhhhccCCCC----------ccCc
Q 000399 443 YSS------SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDE----------CIPE 506 (1566)
Q Consensus 443 ~~~------~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~E----------liPE 506 (1566)
|.. ....+||.++++|+.+++.|++|..|++.++..++.+|.+..++..++++..|++.+ +|||
T Consensus 415 ~~~~~d~~~~~~~~~~~t~~~S~~~~~~y~~r~~p~~~~~~~i~~~~~~~~d~~~~s~~~~Wt~~~~~~~~~~i~eli~~ 494 (1081)
T KOG1786|consen 415 FEEWLDQNAEDPLFHVLTHLLSPLIVMSYFARKNPLSELFLSIRRGYFPIADRLFHSRMQAWTPDEKGNLHSCIKELIPK 494 (1081)
T ss_pred hhhhhccccccccccccccccchhhhhhhhhhcCcchHHHHHhhcccccccchhhhhhhcccCcccccccchhHHHHHHH
Confidence 322 223479999999999999999999999999999999998888877788888887655 6788
Q ss_pred cccCcchhhc-------cCCC---CcccccCCCCC-ChHHHHHHhhhhhcccccceeeeeeEEee-eecccccccccccc
Q 000399 507 FYCDPQIFYS-------QHPG---MTDLAVPPWAG-SPEEFIKLHRDALESDRVSSRIHHWIDIT-FGYKMSGQAAIDAK 574 (1566)
Q Consensus 507 ff~~p~~~~~-------~~~~---~~dv~lP~Wa~-~~~~Fi~~~r~aLEs~~Vs~~l~~WIDLi-fG~kq~g~~a~~a~ 574 (1566)
||++|+||.| .+.. ++||.|||||. +|++||.+||+|||++|||++||+|||++ |||||.|++|+.+.
T Consensus 495 ~~~~p~~l~n~~~~~lg~~~~~~~~~~~~lP~ws~~~~~~fi~~h~~ale~~~vs~~Lh~wId~~~fgykq~g~~~~~~~ 574 (1081)
T KOG1786|consen 495 FVNDPSFLENSVILDLGEKQNGDSVDDVILPPWSSSSPREFIRDHRKALESNRVSQRLHHWIDLTIFGYKQNGSAAVIAM 574 (1081)
T ss_pred hccChHHHhhhhhhhhhhhcccccccceecCcccccCHHHHHHHHhhcccccchhhccccceeeehhhhhhcchHHHHHH
Confidence 8899999998 3333 89999999998 79999999999999999999999999999 99999999999999
Q ss_pred cccc----cCCCCC---------------C---Ccccc--ccccccCCCCcccccc
Q 000399 575 NVML----PSSEPT---------------K---PKSVG--RLQLFTQPHPVRQTAT 606 (1566)
Q Consensus 575 Nvf~----~~~~~~---------------~---~~~~g--~~qlF~~pHp~r~~~~ 606 (1566)
|||+ +..+.. + ...+| |+|+|.++||.+....
T Consensus 575 nv~~~~~~~l~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~~~h~~~~~~~ 630 (1081)
T KOG1786|consen 575 NVFLVSNKHLFYVNSVLNLRGYDPLEQNILIVSNNHFKQTIKQLFPKKHSVSELTE 630 (1081)
T ss_pred HHHhhhhhhhccccchhhhcccchhhhhhhHHHhhccccchhhcccccccccccch
Confidence 9999 654321 0 11234 6999999999987765
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-33 Score=329.23 Aligned_cols=168 Identities=17% Similarity=0.137 Sum_probs=140.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
...|....+||+|+.|.||.|+. ..++..||||.+...+... ++.+ +.|+.+|+..+|+|||.+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~------~~~~~~VaiK~m~l~~Q~~---keLi-------lnEi~Vm~~~~H~NiVnf 335 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARK------ISTKQEVAIKRMDLRKQPK---KELL-------LNEILVMRDLHHPNIVNF 335 (550)
T ss_pred hhhhcchhhhccccccceeeeee------ccCCceEEEEEEEeccCCc---hhhh-------HHHHHHHHhccchHHHHH
Confidence 44788999999999999999885 3578889999998754333 3333 479999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.|...+.+|+||||++| +|-+++.. ..++|.++..|++++++||+|||.+||||||||.+|||++.++ .+||
T Consensus 336 l~Sylv~deLWVVMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g--~vKl 410 (550)
T KOG0578|consen 336 LDSYLVGDELWVVMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG--SVKL 410 (550)
T ss_pred HHHhcccceeEEEEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC--cEEE
Confidence 9999999999999999997 99999973 3489999999999999999999999999999999999999999 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKL 360 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 360 (1566)
+|||++........ .....+|||+|||||+
T Consensus 411 tDFGFcaqi~~~~~-----------KR~TmVGTPYWMAPEV 440 (550)
T KOG0578|consen 411 TDFGFCAQISEEQS-----------KRSTMVGTPYWMAPEV 440 (550)
T ss_pred eeeeeeeccccccC-----------ccccccCCCCccchhh
Confidence 99999886542110 1122357777777765
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-32 Score=305.76 Aligned_cols=224 Identities=20% Similarity=0.235 Sum_probs=205.9
Q ss_pred ccccCCCceec--cCCC--CCCCCCcccccccCccCCCCceEee-eeehhhhhccCcceeeeecCcceEEEeeccCCCcc
Q 000399 1278 NLMKCEPWFWF--PTPA--ASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpd--g~~~~~~~LaSgS~D~~I~vWdl~~-~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D 1352 (1566)
.+..|++.|-+ |+|. +.- +|||+.||+|++|++++ ..++.+.||...|..|+|+|+|++|+|+|- |
T Consensus 212 ~l~gH~~~v~~~~fhP~~~~~~-----lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~Tasf----D 282 (459)
T KOG0272|consen 212 TLRGHTSRVGAAVFHPVDSDLN-----LATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASF----D 282 (459)
T ss_pred EEeccccceeeEEEccCCCccc-----eeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeeccc----c
Confidence 34568888887 8887 333 99999999999999998 489999999999999999999999999996 9
Q ss_pred cceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccc
Q 000399 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1566)
Q Consensus 1353 ~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~ 1430 (1566)
.|-++||+.+++.+....||...|.+|+|.++|..++|| |..-+|||+++|+++..+.+|
T Consensus 283 ~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH------------------ 344 (459)
T KOG0272|consen 283 STWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGH------------------ 344 (459)
T ss_pred cchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEeccc------------------
Confidence 999999999999999999999999999999999999998 999999999999999999886
Q ss_pred cCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhcc
Q 000399 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1566)
Q Consensus 1431 ~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s 1510 (1566)
...|.+|+|+|+ |..++|||.|++++|||++..+++.++.+| .+.|+.|+|+
T Consensus 345 ------------~k~I~~V~fsPN----------Gy~lATgs~Dnt~kVWDLR~r~~ly~ipAH------~nlVS~Vk~~ 396 (459)
T KOG0272|consen 345 ------------IKEILSVAFSPN----------GYHLATGSSDNTCKVWDLRMRSELYTIPAH------SNLVSQVKYS 396 (459)
T ss_pred ------------ccceeeEeECCC----------ceEEeecCCCCcEEEeeecccccceecccc------cchhhheEec
Confidence 567999999998 889999999999999999999999888876 6678999998
Q ss_pred CCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1511 ~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
|. .|.+|+|+|.|+++++|..+++.+++++.||++.|-+|+++|||
T Consensus 397 p~----------~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~ 442 (459)
T KOG0272|consen 397 PQ----------EGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDS 442 (459)
T ss_pred cc----------CCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCC
Confidence 63 34689999999999999999999999999999999999999986
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-32 Score=331.63 Aligned_cols=154 Identities=21% Similarity=0.235 Sum_probs=134.1
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV 238 (1566)
....|++.+.||+|.||.||+|+++ .+|..+|+|.+.+.........+.+. +|+.+|+++. |||||
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~------~tg~~~A~K~i~k~~~~~~~~~~~v~-------~Ev~il~~l~~hpniv 99 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREK------STGKEVACKVIPKRKLRGKEDREDVR-------REVAILQQLSGHPNIV 99 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEec------CCCceeEEEEeehhhccccccHHHHH-------HHHHHHHhccCCCCEE
Confidence 3557999999999999999999874 56999999999987665443333443 7999999998 99999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch--h
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW--S 315 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~--~ 315 (1566)
.++++|++...+++|||+|.| .|++.|... .+++..+..++.|++.|+.|||+.||+||||||+|+|+..... .
T Consensus 100 ~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~ 176 (382)
T KOG0032|consen 100 QLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSG 176 (382)
T ss_pred EEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCC
Confidence 999999999999999999996 999999854 3899999999999999999999999999999999999986642 3
Q ss_pred hhhhcCcCCCCccc
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~ 329 (1566)
.+|++|||+|....
T Consensus 177 ~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 177 RIKLIDFGLAKFIK 190 (382)
T ss_pred cEEEeeCCCceEcc
Confidence 79999999998655
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.3e-32 Score=311.38 Aligned_cols=153 Identities=17% Similarity=0.174 Sum_probs=135.1
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..+.|++...||.|.-++||+|+. ...+..||||++.-++.... .+.++ +|+..|+.++||||++
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c------~p~~e~VAIK~inLEkc~~~--ld~l~-------kE~~~msl~~HPNIv~ 88 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARC------IPTNEVVAIKIINLEKCNND--LDALR-------KEVQTMSLIDHPNIVT 88 (516)
T ss_pred CccceeEEEEEeccceeEeeeeee------cccCCEEEEEEeehhhhhhh--HHHHH-------HHHHHhhhcCCCCcce
Confidence 356899999999999999999885 46789999999987765443 23333 7999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++..|..+..+|+||+||.+ ++.++++..-...+.|..+..|++++++||.|||.+|.||||||+.||||+.+| .||
T Consensus 89 ~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG--~Vk 166 (516)
T KOG0582|consen 89 YHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG--TVK 166 (516)
T ss_pred EEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC--cEE
Confidence 99999999999999999996 999999864445589999999999999999999999999999999999999999 799
Q ss_pred hcCcCCCCccc
Q 000399 319 ICDKPLVGFNS 329 (1566)
Q Consensus 319 L~DFGlA~~~~ 329 (1566)
|+|||.+....
T Consensus 167 LadFgvsa~l~ 177 (516)
T KOG0582|consen 167 LADFGVSASLF 177 (516)
T ss_pred EcCceeeeeec
Confidence 99999876433
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-32 Score=318.47 Aligned_cols=148 Identities=22% Similarity=0.278 Sum_probs=126.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..||+|.+...... .....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~niv~~ 68 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEE-GAPCTAI--------REVSLLKNLKHANIVTL 68 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEEC------CCCCEEEEEEecccccC-CcchhHH--------HHHHHHHhCCCCCEeeE
Confidence 568999999999999999998863 46888999998754221 1112222 69999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.+.+..|+||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~ 145 (288)
T cd07871 69 HDIIHTERCLTLVFEYLDSDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLA 145 (288)
T ss_pred EEEEcCCCeEEEEEeCCCcCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEC
Confidence 9999999999999999999999988642 33467888999999999999999999999999999999999998 79999
Q ss_pred CcCCCC
Q 000399 321 DKPLVG 326 (1566)
Q Consensus 321 DFGlA~ 326 (1566)
|||+++
T Consensus 146 DfG~~~ 151 (288)
T cd07871 146 DFGLAR 151 (288)
T ss_pred cCccee
Confidence 999986
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-32 Score=320.44 Aligned_cols=149 Identities=17% Similarity=0.180 Sum_probs=127.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.++ .++..+|+|++...........+.+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~iv~~~ 67 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDR------ISEHYYALKVMAIPEVIRLKQEQHVH-------NEKRVLKEVSHPFIIRLF 67 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhhHHHHHHH-------HHHHHHHhCCCCcHhhhH
Confidence 36899999999999999998863 46889999998754322211122222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+.+.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--~~kl~ 143 (291)
T cd05612 68 WTEHDQRFLYMLMEYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIKLT 143 (291)
T ss_pred hhhccCCeEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEE
Confidence 999999999999999986 99999973 44578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCc
Q 000399 321 DKPLVGF 327 (1566)
Q Consensus 321 DFGlA~~ 327 (1566)
|||+++.
T Consensus 144 Dfg~~~~ 150 (291)
T cd05612 144 DFGFAKK 150 (291)
T ss_pred ecCcchh
Confidence 9998863
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-32 Score=325.09 Aligned_cols=148 Identities=16% Similarity=0.140 Sum_probs=128.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|++.+....... ...+. +|+.+|+.++||||++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~ 82 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHK------GTGEYYAIKCLKKREILKMKQVQHVA--------QEKSILMELSHPFIVN 82 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH--------HHHHHHHhCCCCCCCc
Confidence 568999999999999999998863 46889999998765332221 22233 6999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++.+++.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~k 158 (329)
T PTZ00263 83 MMCSFQDENRVYFLLEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HVK 158 (329)
T ss_pred EEEEEEcCCEEEEEEcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC--CEE
Confidence 99999999999999999986 99999973 44578889999999999999999999999999999999999998 799
Q ss_pred hcCcCCCC
Q 000399 319 ICDKPLVG 326 (1566)
Q Consensus 319 L~DFGlA~ 326 (1566)
|+|||+++
T Consensus 159 l~Dfg~~~ 166 (329)
T PTZ00263 159 VTDFGFAK 166 (329)
T ss_pred EeeccCce
Confidence 99999886
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-32 Score=323.45 Aligned_cols=141 Identities=21% Similarity=0.208 Sum_probs=121.7
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|+++ .++..+|+|++.+...... ....++ +|+.+|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05571 1 KLLGKGTFGKVILVREK------ATGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLQNTRHPFLTALKYSFQT 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCCCEEEEEEc
Confidence 46999999999998863 5788999999886433222 222233 59999999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a 142 (323)
T cd05571 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEeeCCCC
Confidence 9999999999997 9999887 345678999999999999999999999999999999999999988 7999999998
Q ss_pred C
Q 000399 326 G 326 (1566)
Q Consensus 326 ~ 326 (1566)
+
T Consensus 143 ~ 143 (323)
T cd05571 143 K 143 (323)
T ss_pred c
Confidence 6
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-32 Score=317.45 Aligned_cols=170 Identities=15% Similarity=0.187 Sum_probs=140.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
..|+.++.||+|+||.||+|.+. .+++.||+|++.-+.... ..+-++ +|+.+|.++++|||.++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~------~t~k~vAiKii~Le~~~d--eIediq-------qei~~Ls~~~~~~it~yy 77 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDN------KTKKVVAIKIIDLEEAED--EIEDIQ-------QEISVLSQCDSPNITEYY 77 (467)
T ss_pred cccccchhccccccceeeeeeec------cccceEEEEEechhhcch--hhHHHH-------HHHHHHHhcCcchHHhhh
Confidence 36888899999999999999974 689999999998754322 222222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.|..+..++++||||.| ++.+.++ ....+.+..+..++++++.|+.|||.++.+|||||+.|||+..+| .+|++
T Consensus 78 gsyl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g--~vkl~ 153 (467)
T KOG0201|consen 78 GSYLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG--DVKLA 153 (467)
T ss_pred hheeecccHHHHHHHhcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC--cEEEE
Confidence 999999999999999997 9999998 344558889999999999999999999999999999999999998 69999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
|||++.+...... ...+++|||+|||||++
T Consensus 154 DfgVa~ql~~~~~-----------rr~tfvGTPfwMAPEVI 183 (467)
T KOG0201|consen 154 DFGVAGQLTNTVK-----------RRKTFVGTPFWMAPEVI 183 (467)
T ss_pred ecceeeeeechhh-----------ccccccccccccchhhh
Confidence 9999986542111 11234577777777664
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=314.97 Aligned_cols=145 Identities=18% Similarity=0.279 Sum_probs=119.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|...+.||++.|=+|.+|++ .+|. ++||+.-+... .-....|.+++ +|++ ...++|||++++.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-------~eG~-vVvKVFvk~~p-~~sL~~~~qrL-----~~ik-~~l~~~pn~lPfqk 88 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-------REGL-VVVKVFVKQDP-TISLRPFKQRL-----EEIK-FALMKAPNCLPFQK 88 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-------CCce-EEEEEEeccCC-CCCchHHHHHH-----HHHH-HHhhcCCcccchHH
Confidence 677889999999999999997 3555 88999876531 12223333322 4666 56678999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+..++...|||=+|...+|+|.|.. +..+..-+.+.|+.|++.||.-||..||+|+|||.+||||+.-+| +.|+||
T Consensus 89 ~~~t~kAAylvRqyvkhnLyDRlST--RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW--~~LtDF 164 (1431)
T KOG1240|consen 89 VLVTDKAAYLVRQYVKHNLYDRLST--RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNW--LYLTDF 164 (1431)
T ss_pred HHHhhHHHHHHHHHHhhhhhhhhcc--chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeech--hhhhcc
Confidence 9999999999999999999999984 344677888999999999999999999999999999999999885 999999
Q ss_pred CCCC
Q 000399 323 PLVG 326 (1566)
Q Consensus 323 GlA~ 326 (1566)
.--|
T Consensus 165 AsFK 168 (1431)
T KOG1240|consen 165 ASFK 168 (1431)
T ss_pred cccC
Confidence 7554
|
|
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=320.68 Aligned_cols=147 Identities=23% Similarity=0.336 Sum_probs=124.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|+++ .++..||||.+...........+++ +|+.+|+.++||||+++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDT------HTGEKVAIKKINDVFEHVSDATRIL--------REIKLLRLLRHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEechhhccchhHHHHH--------HHHHHHHhCCCCCEeeecc
Confidence 5899999999999999998863 5788999999875322222223333 5999999999999999999
Q ss_pred ccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 243 LLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 243 ~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++... ..+|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~ 142 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELMESDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KL 142 (338)
T ss_pred eEeccCCCCCceEEEEEecCCCCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cE
Confidence 88543 25899999999999999873 34578899999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCCc
Q 000399 318 YICDKPLVGF 327 (1566)
Q Consensus 318 KL~DFGlA~~ 327 (1566)
||+|||+++.
T Consensus 143 kL~Dfg~~~~ 152 (338)
T cd07859 143 KICDFGLARV 152 (338)
T ss_pred EEccCccccc
Confidence 9999999873
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=311.11 Aligned_cols=171 Identities=18% Similarity=0.185 Sum_probs=143.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|+++..||.|+||.||+|.++ +++...|.|++.. .+.+....++. ||+||..++||+||+|
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nk------et~~lAAaKvIet--kseEELEDylV--------EIeILa~CdHP~ivkL 94 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNK------ETKLLAAAKVIET--KSEEELEDYLV--------EIEILAECDHPVIVKL 94 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcc------cchhhhhhhhhcc--cchhHHhhhhh--------hhhhhhcCCChHHHHH
Confidence 456899999999999999999974 6788888998765 34455566664 9999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.|...+.++|+.|||+| -+..++-.. ...+.+..++.+++|++.||.|||+++|||||||..|||++-+| .++|
T Consensus 95 l~ayy~enkLwiliEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG--dirL 171 (1187)
T KOG0579|consen 95 LSAYYFENKLWILIEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG--DIRL 171 (1187)
T ss_pred HHHHhccCceEEEEeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC--cEee
Confidence 9999999999999999997 777666532 34589999999999999999999999999999999999999999 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
+|||++..+..... ....++|||+|||||+.
T Consensus 172 ADFGVSAKn~~t~q-----------kRDsFIGTPYWMAPEVv 202 (1187)
T KOG0579|consen 172 ADFGVSAKNKSTRQ-----------KRDSFIGTPYWMAPEVV 202 (1187)
T ss_pred ecccccccchhHHh-----------hhccccCCcccccchhe
Confidence 99999875442111 12346799999999874
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.1e-32 Score=335.03 Aligned_cols=146 Identities=21% Similarity=0.252 Sum_probs=120.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++++.||+|+||.||+|.+. .++..||||.+..... ... +|+.+|+.++|||||++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~-------~~~-------~Ei~il~~l~h~niv~l 124 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICI------DTSEKVAIKKVLQDPQ-------YKN-------RELLIMKNLNHINIIFL 124 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEecCcc-------hHH-------HHHHHHHhcCCCCCcce
Confidence 357999999999999999998853 4678899998864321 122 58999999999999999
Q ss_pred ccccccc--------CceeeeccCCccchhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 241 LGLLKTS--------GLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 241 ~~~~~~~--------~~l~LV~E~~~gsL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
++++... ..+++||||++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID 204 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc
Confidence 9887432 25779999999988887753 2334578889999999999999999999999999999999998
Q ss_pred ccchhhhhhcCcCCCCc
Q 000399 311 DSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~ 327 (1566)
.++. .+||+|||+|+.
T Consensus 205 ~~~~-~vkL~DFGla~~ 220 (440)
T PTZ00036 205 PNTH-TLKLCDFGSAKN 220 (440)
T ss_pred CCCC-ceeeeccccchh
Confidence 6652 599999999873
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-31 Score=309.36 Aligned_cols=172 Identities=19% Similarity=0.227 Sum_probs=144.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~ 241 (1566)
.|+++++||+||-+.||++.. .+...+|+|.+.....+.+...-|.+ |+..|.+|+ |-+||+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~-------s~~~iyalkkv~~~~~D~qtl~gy~n--------EI~lL~KLkg~~~IIqL~ 426 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLN-------SDKQIYALKKVVLLEADNQTLDGYRN--------EIALLNKLKGHDKIIQLY 426 (677)
T ss_pred hhhHHHhhcCCCcceeeeeec-------CCCcchhhhHHHHhhcCHHHHHHHHH--------HHHHHHHhcCCceEEEEe
Confidence 699999999999999999884 56788899888766666666666664 999999995 99999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+|-.+++.+||||||-+.+|..+|+. +....+.+.+++|.+|++.|+.++|..||||.||||.|+|+-.+. +||+|
T Consensus 427 DYEv~d~~lYmvmE~Gd~DL~kiL~k-~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~---LKLID 502 (677)
T KOG0596|consen 427 DYEVTDGYLYMVMECGDIDLNKILKK-KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGR---LKLID 502 (677)
T ss_pred eeeccCceEEEEeecccccHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeee---EEeee
Confidence 99999999999999999999999984 333456689999999999999999999999999999999999876 99999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
||+|...... + +......-+||+-||+||.+.
T Consensus 503 FGIA~aI~~D----T-----TsI~kdsQvGT~NYMsPEAl~ 534 (677)
T KOG0596|consen 503 FGIANAIQPD----T-----TSIVKDSQVGTVNYMSPEALT 534 (677)
T ss_pred echhcccCcc----c-----cceeeccccCcccccCHHHHh
Confidence 9999976531 1 111223345888899988763
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-31 Score=313.36 Aligned_cols=140 Identities=21% Similarity=0.248 Sum_probs=120.3
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
||+|+||.||+|++. .++..+|+|++.+..... .....+. +|+.+|+.++||||+++++++...+
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~~ 66 (312)
T cd05585 1 IGKGSFGKVMQVRKR------DTQRIYALKTIRKAHIVSRSEVTHTL--------AERTVLAQVNCPFIVPLKFSFQSPE 66 (312)
T ss_pred CCcCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCcEeceeeEEecCC
Confidence 799999999998863 568889999987643222 2222333 5999999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~ 142 (312)
T cd05585 67 KLYLVLAFINGGELFHHLQR--EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIALCDFGLCKL 142 (312)
T ss_pred eEEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC--cEEEEECccccc
Confidence 99999999997 99999973 44578999999999999999999999999999999999999988 799999999873
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-31 Score=314.71 Aligned_cols=141 Identities=22% Similarity=0.192 Sum_probs=121.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+++++ .++..+|+|++.+..... .....++ +|+.+|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~~~~~~~~ 66 (328)
T cd05593 1 KLLGKGTFGKVILVREK------ASGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLKNTRHPFLTSLKYSFQT 66 (328)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCcceEEEEEc
Confidence 46999999999998863 578899999998653322 2222333 59999999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~Ey~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DfG~~ 142 (328)
T cd05593 67 KDRLCFVMEYVNGGELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKITDFGLC 142 (328)
T ss_pred CCEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC--cEEEecCcCC
Confidence 9999999999987 99888863 44578999999999999999999999999999999999999988 7999999998
Q ss_pred C
Q 000399 326 G 326 (1566)
Q Consensus 326 ~ 326 (1566)
+
T Consensus 143 ~ 143 (328)
T cd05593 143 K 143 (328)
T ss_pred c
Confidence 6
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-31 Score=301.18 Aligned_cols=189 Identities=17% Similarity=0.246 Sum_probs=166.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.|-+|++. ..|+.||||.+++.++..+...-.++ |||+||..|+||||+.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~------~sgR~VAiKsIrKdkIkdeqDlvhIR-------REIeIMSsLNHPhII~I 118 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEH------KSGREVAIKSIRKDKIKDEQDLVHIR-------REIEIMSSLNHPHIIQI 118 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhc------cCCcEeehhhhhhhhcccHHHHHHHH-------HHHHHHhhcCCCceeeh
Confidence 458999999999999999999874 57999999999998765543333333 89999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
|++|+..+.+.|||||..+ .|++|+. ..+.+++.+++.+++||++|+.|||.++|+|||||.+|||+|.++ .+||
T Consensus 119 yEVFENkdKIvivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~--NiKI 194 (668)
T KOG0611|consen 119 YEVFENKDKIVIVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN--NIKI 194 (668)
T ss_pred hhhhcCCceEEEEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC--Ceee
Confidence 9999999999999999986 9999998 456689999999999999999999999999999999999999999 5999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhh-cccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~-~~d~Ws~G~i 378 (1566)
+|||++..... ..+..+++|+|.|.+||++.+.+|.. .+|-|+.|++
T Consensus 195 ADFGLSNly~~------------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvL 242 (668)
T KOG0611|consen 195 ADFGLSNLYAD------------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVL 242 (668)
T ss_pred eccchhhhhcc------------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHH
Confidence 99999986542 12445567999999999999999965 8999999986
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-31 Score=318.90 Aligned_cols=146 Identities=27% Similarity=0.357 Sum_probs=124.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||.||+|.+. .++..||+|.+..........+++. +|+.+|+.++||||+++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDP------RDGKRVALKKMPNVFQNLVSCKRVF--------RELKMLCFFKHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEEC------CCCCEEEEEeccccccchHHHHHHH--------HHHHHHHhCCCCCcCCHhh
Confidence 4788999999999999998863 4788999999865322222223333 6999999999999999999
Q ss_pred cccccC-----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 243 ~~~~~~-----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++...+ .+|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~--~~ 142 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC--VL 142 (372)
T ss_pred eecCCCccccceEEEEeeccccCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC--CE
Confidence 998776 7999999999999888863 44578899999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCC
Q 000399 318 YICDKPLVG 326 (1566)
Q Consensus 318 KL~DFGlA~ 326 (1566)
||+|||+++
T Consensus 143 kL~Dfg~a~ 151 (372)
T cd07853 143 KICDFGLAR 151 (372)
T ss_pred Eecccccee
Confidence 999999886
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-30 Score=332.92 Aligned_cols=174 Identities=13% Similarity=0.129 Sum_probs=141.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+++|++++.||+|+||.||+|++. .++..||||++.+.........+.+. +|+.+++.++||||+++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiKvi~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~Iv~~ 69 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKK------NNSKLYAVKVVKKADMINKNMVHQVQ-------AERDALALSKSPFIVHL 69 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCcEEEEEEEehhhccCHHHHHHHH-------HHHHHHHhcCCCCcCeE
Confidence 568999999999999999998863 46889999998764433222222222 68889999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+||||||+.+ +|.+++.. .+.+++..++.++.||+.||.|||.+|||||||||+||||+.++ .+||
T Consensus 70 ~~~~~~~~~~~lVmEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--~vkL 145 (669)
T cd05610 70 YYSLQSANNVYLVMEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKL 145 (669)
T ss_pred EEEEEECCEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC--CEEE
Confidence 9999999999999999986 99999973 34578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
+|||+++....... ......+|+.|++||...
T Consensus 146 ~DFGls~~~~~~~~-----------~~~~~~~t~~~~~pe~~~ 177 (669)
T cd05610 146 TDFGLSKVTLNREL-----------NMMDILTTPSMAKPKNDY 177 (669)
T ss_pred EeCCCCccccCCcc-----------cccccccCccccCccccc
Confidence 99999986442110 112235888999998653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-30 Score=310.35 Aligned_cols=141 Identities=19% Similarity=0.173 Sum_probs=118.9
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcc-cCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|+++ .++..||+|++.+..... .....+. +|..++..+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~h~~iv~~~~~~~ 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLK------ESGRLYAVKVLKKDVILQDDDVECTM--------TEKRILSLARNHPFLTQLYCCFQ 66 (320)
T ss_pred CeeeeCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhccHHHHHH--------HHHHHHHhccCCCchhceeeEEE
Confidence 47999999999998863 568899999987653222 1222223 477777766 6999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~iv~Ey~~~g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--~~kL~DfG~ 142 (320)
T cd05590 67 TPDRLFFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGM 142 (320)
T ss_pred cCCEEEEEEcCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeeCCC
Confidence 99999999999997 99998873 34578999999999999999999999999999999999999998 799999999
Q ss_pred CC
Q 000399 325 VG 326 (1566)
Q Consensus 325 A~ 326 (1566)
++
T Consensus 143 ~~ 144 (320)
T cd05590 143 CK 144 (320)
T ss_pred Ce
Confidence 76
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-30 Score=309.06 Aligned_cols=145 Identities=17% Similarity=0.220 Sum_probs=121.5
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc--ccccchhhhcCCCCCCCCCCCCcccCCCcccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~--~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~ 244 (1566)
++.||+|+||.||++++. .....+..+|+|++.+..... .....+. +|+.+|+.++||||+++++++
T Consensus 1 ~~~lg~G~~g~V~~~~~~---~~~~~~~~~avK~~~~~~~~~~~~~~~~~~--------~E~~il~~l~hp~iv~~~~~~ 69 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKV---TGADTGKIFAMKVLKKATIVRNQKDTAHTK--------AERNILEAVKHPFIVDLIYAF 69 (323)
T ss_pred CceeeecCCeEEEEEEEc---ccCCCCCEEEEEEEEHHHHHhhhhhHHHHH--------HHHHHHHhCCCCchhceeeEE
Confidence 468999999999988742 122568899999988643221 1111222 589999999999999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
.+++.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 70 ~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg 145 (323)
T cd05584 70 QTGGKLYLILEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVKLTDFG 145 (323)
T ss_pred ecCCeEEEEEeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEeeCc
Confidence 999999999999997 9999987 345578888999999999999999999999999999999999998 79999999
Q ss_pred CCC
Q 000399 324 LVG 326 (1566)
Q Consensus 324 lA~ 326 (1566)
+++
T Consensus 146 ~~~ 148 (323)
T cd05584 146 LCK 148 (323)
T ss_pred CCe
Confidence 886
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-31 Score=309.47 Aligned_cols=164 Identities=23% Similarity=0.294 Sum_probs=135.1
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
.||+|+||+||-|++. .+...+|||.+.... .+... +...||.+-+.|+|.|||+++|.+..++
T Consensus 582 VLGKGTYG~VYA~RD~------~tqvrIaIKEIpekd--sr~~Q--------PLhEEIaLH~~LrHkNIVrYLGs~senG 645 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDM------DTQVRIAIKEIPEKD--SREVQ--------PLHEEIALHSTLRHKNIVRYLGSVSENG 645 (1226)
T ss_pred EeecCceeEEEeeccc------cceeEEEeeeccccc--chhhc--------cHHHHHHHHHHHhhHhHHHHhhccCCCC
Confidence 6999999999999974 678889999987532 12111 2336999999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccCccccc--chhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l--~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+-|.||-++| +|.++|+ ++-+++ .+..+.+|.+||++||+|||++.|||||||-+|+|++.-. ..+||+|||.+
T Consensus 646 f~kIFMEqVPGGSLSsLLr-skWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTyS-GvlKISDFGTs 723 (1226)
T KOG4279|consen 646 FFKIFMEQVPGGSLSSLLR-SKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYS-GVLKISDFGTS 723 (1226)
T ss_pred eEEEEeecCCCCcHHHHHH-hccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeecc-ceEEecccccc
Confidence 99999999997 9999998 456676 7888899999999999999999999999999999998643 27999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
+...+. . -+.+++.||.-|||||++
T Consensus 724 KRLAgi-------n----P~TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 724 KRLAGI-------N----PCTETFTGTLQYMAPEVI 748 (1226)
T ss_pred hhhccC-------C----ccccccccchhhhChHhh
Confidence 865532 1 134456688888888775
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-30 Score=291.64 Aligned_cols=211 Identities=19% Similarity=0.305 Sum_probs=193.1
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCc--ceEEEeeccCCCcccceeeEEeccccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQD--ECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd--~~~LaSgS~~~~~D~tVrlWDl~tg~~ 1365 (1566)
||.|+.. |+|||++|.+++|+..+. .+++++||++.|.++.|+|. +..++||+. ||+|++|++.+...
T Consensus 183 fS~ds~~-----laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~----Dgtvklw~~~~e~~ 253 (459)
T KOG0272|consen 183 FSRDSKH-----LATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASA----DGTVKLWKLSQETP 253 (459)
T ss_pred eecCCCe-----EEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeecc----CCceeeeccCCCcc
Confidence 8999998 999999999999998864 88999999999999999996 568999998 99999999999999
Q ss_pred ccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccc
Q 000399 1366 VSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1443 (1566)
Q Consensus 1366 i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1443 (1566)
+..++||...|..|+|+|+|++|+|+ |.+-++||+++++.+....+| +
T Consensus 254 l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGH------------------------------s 303 (459)
T KOG0272|consen 254 LQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGH------------------------------S 303 (459)
T ss_pred hhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccc------------------------------c
Confidence 99999999999999999999999876 999999999999887655554 6
Q ss_pred cccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccc
Q 000399 1444 SGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1444 ~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spd 1523 (1566)
.+|.+++|+++ |..++|||.|..-||||+|+|+++..+.+|.. .|.+|+| +|+
T Consensus 304 ~~v~~iaf~~D----------GSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k------~I~~V~f-----------sPN 356 (459)
T KOG0272|consen 304 KGVFSIAFQPD----------GSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK------EILSVAF-----------SPN 356 (459)
T ss_pred cccceeEecCC----------CceeeccCccchhheeecccCcEEEEeccccc------ceeeEeE-----------CCC
Confidence 77999999987 99999999999999999999999999998844 4455554 577
Q ss_pred hhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1524 PSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1524 g~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
|..|||||.|++++|||++..+.++++.+|.+-|+.|+|+|+
T Consensus 357 Gy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~ 398 (459)
T KOG0272|consen 357 GYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQ 398 (459)
T ss_pred ceEEeecCCCCcEEEeeecccccceecccccchhhheEeccc
Confidence 789999999999999999999999999999999999999984
|
|
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-30 Score=311.31 Aligned_cols=150 Identities=25% Similarity=0.298 Sum_probs=125.8
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.+.++|++++.||+|+||.||+|.+. .++..||+|.+............+. +|+.+|+.++||||+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv 77 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDT------RLRQKVAVKKLSRPFQSLIHARRTY--------RELRLLKHMKHENVI 77 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEEC------CCCCEEEEEEeCchhhhhHHHHHHH--------HHHHHHHhcCCCchh
Confidence 44678999999999999999998763 4678899999875432222222333 599999999999999
Q ss_pred ccccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 239 PVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 239 ~l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
++++++... ...|++||+++++|.++++ ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~ 154 (343)
T cd07878 78 GLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 154 (343)
T ss_pred hhhhhhcccccccccCcEEEEeecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC
Confidence 999988643 3579999999889998886 3357899999999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCc
Q 000399 313 CWSWLYICDKPLVGF 327 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~ 327 (1566)
+ .+||+|||+++.
T Consensus 155 ~--~~kl~Dfg~~~~ 167 (343)
T cd07878 155 C--ELRILDFGLARQ 167 (343)
T ss_pred C--CEEEcCCcccee
Confidence 8 799999999863
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-30 Score=304.57 Aligned_cols=148 Identities=21% Similarity=0.269 Sum_probs=126.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|.+...... .....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEE-GAPCTAI--------REVSLLKDLKHANIVTL 69 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEec------CCCCeEEEEEeeccccC-CcchhHH--------HHHHHHHhCCCCCcceE
Confidence 568999999999999999998863 46788999998754322 1112222 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++..++..|+||||++++|.+++... ...++...++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 146 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLDKDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (309)
T ss_pred EEEEeeCCeEEEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 9999999999999999999998888643 33467888999999999999999999999999999999999988 79999
Q ss_pred CcCCCC
Q 000399 321 DKPLVG 326 (1566)
Q Consensus 321 DFGlA~ 326 (1566)
|||+++
T Consensus 147 Dfg~~~ 152 (309)
T cd07872 147 DFGLAR 152 (309)
T ss_pred ccccce
Confidence 999886
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-30 Score=277.48 Aligned_cols=203 Identities=19% Similarity=0.187 Sum_probs=177.5
Q ss_pred hhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC
Q 000399 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
.....++|++.+.||+|-||.||+|+.+ +++.+||+|++.+.+.........++ ||++|-..|+|||
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarek------ks~~IvalKVlfKsqi~~~~v~~qlr-------REiEIqs~L~hpn 83 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREK------KSLFIVALKVLFKSQILKTQVEHQLR-------REIEIQSHLRHPN 83 (281)
T ss_pred cccchhhccccccccCCccccEeEeeec------cCCcEEEEeeeeHHHHHHhcchhhhh-------heeEeecccCCcc
Confidence 3455789999999999999999999864 68999999999998877766666666 8999999999999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
|+++|++|.++..+||++||.+. +|...|+..+...+++..+..|++|++.||.|||.++||||||||+|+|++..+
T Consensus 84 ilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~-- 161 (281)
T KOG0580|consen 84 ILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG-- 161 (281)
T ss_pred HHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC--
Confidence 99999999999999999999985 999999977777899999999999999999999999999999999999999999
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||-+-.... ..+ .+.+||..|.+||+..+..++..+|.|+.|++ .++.+-|.+
T Consensus 162 ~lkiAdfGwsV~~p~--------~kR-----~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl-------~yeflvg~p 220 (281)
T KOG0580|consen 162 ELKIADFGWSVHAPS--------NKR-----KTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVL-------CYEFLVGLP 220 (281)
T ss_pred CeeccCCCceeecCC--------CCc-----eeeecccccCCHhhcCCCCccchhhHHHHHHH-------HHHHHhcCC
Confidence 799999999875431 111 12349999999999999999999999999987 555555544
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-30 Score=282.99 Aligned_cols=150 Identities=19% Similarity=0.159 Sum_probs=125.5
Q ss_pred hhhhhccccc-ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cC
Q 000399 157 CSRIMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RH 234 (1566)
Q Consensus 157 ~~~~~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~H 234 (1566)
...+.++|.+ -++||-|-.|.|..|.++ .++..+|+|++..... +.||+++--.. .|
T Consensus 56 ~~~itedY~is~qvLG~GinGkV~~C~~k------~T~ekfALKvL~Ds~K---------------ARrEVeLHw~~s~h 114 (400)
T KOG0604|consen 56 EYSITEDYSISWQVLGAGINGKVVQCVHK------RTQEKFALKVLLDSPK---------------ARREVELHWMASGH 114 (400)
T ss_pred cccchhhheehhhhhccccCCceEEEEec------cchhhhHHHHHhcCHH---------------HHhHhhhhhhhcCC
Confidence 3445678887 678999999999988874 5889999999875321 12577754333 69
Q ss_pred CCcccccccccc----cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 235 PNVAPVLGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 235 pNIV~l~~~~~~----~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
||||.++++|+. ...+.+|||.|+| +|++.|.....+.++|.++..|++||+.|+.|||+.+|.||||||+|+|.
T Consensus 115 ~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLy 194 (400)
T KOG0604|consen 115 PHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLY 194 (400)
T ss_pred CceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheee
Confidence 999999999864 3578999999997 99999997777889999999999999999999999999999999999999
Q ss_pred cccch-hhhhhcCcCCCCc
Q 000399 310 TDSCW-SWLYICDKPLVGF 327 (1566)
Q Consensus 310 ~~~~~-~~vKL~DFGlA~~ 327 (1566)
+.... ..+||+|||+|+.
T Consensus 195 t~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 195 TTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred ecCCCCcceEecccccccc
Confidence 86543 3799999999984
|
|
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-30 Score=305.76 Aligned_cols=141 Identities=16% Similarity=0.118 Sum_probs=118.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCc-ccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~-l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|+++ .++..+|+|.+.+...... ...... +|..++.. ++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~~~~~~ 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELK------GKGEYFAVKALKKDVVLIDDDVECTM--------VEKRVLALAWENPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCCccCeeEEEE
Confidence 47999999999998863 4688999999986532211 112222 46677765 48999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05620 67 TKEHLFFVMEFLNGGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEECCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEeCccCC
Confidence 99999999999997 99988873 44578889999999999999999999999999999999999998 799999998
Q ss_pred CC
Q 000399 325 VG 326 (1566)
Q Consensus 325 A~ 326 (1566)
++
T Consensus 143 ~~ 144 (316)
T cd05620 143 CK 144 (316)
T ss_pred Ce
Confidence 76
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7e-30 Score=307.21 Aligned_cols=184 Identities=21% Similarity=0.200 Sum_probs=150.0
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccccccccccc
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLGLLKTS 247 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~~~~~~~ 247 (1566)
.+|+|+||.|++++. .+....+..+|+|++++......... .. ..|..++..++ ||.+|+++.+|+++
T Consensus 1 vlg~g~~gkvfLvrk---~~g~da~~~yamkvl~k~t~~~~~~~-~t-------~~er~il~~~~~~~f~v~lhyafqt~ 69 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRK---AGGADAGHLYAMKVLKKATLKVRDRT-HT-------KQERIILAFVHNTPFLVKLHYAFQTD 69 (612)
T ss_pred CCCcCCCcchHHHHH---hccccccchhhhhccccccccccccc-cc-------ccHHHHHhhccCCCceeeeeeeeccc
Confidence 379999999999884 23346788999999987644333222 22 26888888887 99999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
..++++++|..| +|...+. ....+.+...+++...++-|++++|+.+|+|||+|++||+++.+| ++|+.|||+++
T Consensus 70 ~kl~l~ld~~rgg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~G--hi~~tdfglsk 145 (612)
T KOG0603|consen 70 GKLYLILDFLRGGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEG--HIKLTDFGLSK 145 (612)
T ss_pred cchhHhhhhcccchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccC--ccccCCchhhh
Confidence 999999999997 8888877 344578889999999999999999999999999999999999999 89999999999
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhh
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
..... ... +||..|||||++. ......|+|+.|.+ +|+.+.
T Consensus 146 e~v~~---------~~~------cgt~eymApEI~~--gh~~a~D~ws~gvl-~fellt 186 (612)
T KOG0603|consen 146 EAVKE---------KIA------CGTYEYRAPEIIN--GHLSAADWWSFGVL-AFELLT 186 (612)
T ss_pred HhHhh---------hhc------ccchhhhhhHhhh--ccCCcccchhhhhh-HHHHhh
Confidence 64421 111 3899999999998 55778899999987 444443
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-30 Score=307.76 Aligned_cols=144 Identities=22% Similarity=0.263 Sum_probs=121.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+.++.||+|+||.||+|++. .++..||||++..... ......+. +|+++|+.++||||+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~ 137 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHR------PTGRLYALKVIYGNHE-DTVRRQIC--------REIEILRDVNHPNVVKC 137 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEEC------CCCCEEEEEEEecCCc-HHHHHHHH--------HHHHHHHhCCCCCccee
Confidence 567999999999999999998753 4688999999865321 11122233 69999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+|+||||+++ +|.+... ..+..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 138 ~~~~~~~~~~~lv~e~~~~~~L~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL 209 (353)
T PLN00034 138 HDMFDHNGEIQVLLEFMDGGSLEGTHI------ADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK--NVKI 209 (353)
T ss_pred eeEeccCCeEEEEEecCCCCccccccc------CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999997 7765332 45667788999999999999999999999999999999998 7999
Q ss_pred cCcCCCCc
Q 000399 320 CDKPLVGF 327 (1566)
Q Consensus 320 ~DFGlA~~ 327 (1566)
+|||+++.
T Consensus 210 ~DfG~~~~ 217 (353)
T PLN00034 210 ADFGVSRI 217 (353)
T ss_pred ccccccee
Confidence 99999874
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-29 Score=302.05 Aligned_cols=141 Identities=16% Similarity=0.121 Sum_probs=117.6
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCc-ccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~-l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||+||+|++. .++..+|+|++.+..... ....... +|..++.. ++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~iv~~~~~~~ 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELK------GTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCcCcceEEEEE
Confidence 47999999999998863 467889999998653221 1112222 46667765 48999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05619 67 TKENLFFVMEYLNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999986 99999873 34578888999999999999999999999999999999999998 799999998
Q ss_pred CC
Q 000399 325 VG 326 (1566)
Q Consensus 325 A~ 326 (1566)
++
T Consensus 143 ~~ 144 (316)
T cd05619 143 CK 144 (316)
T ss_pred ce
Confidence 86
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-29 Score=302.31 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=119.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcc-cCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|+++ .++..+|+|++.+....... ...+. +|+.+++.+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~h~~i~~~~~~~~ 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELK------GTDELYAVKVLKKDVILQDDDVECTM--------TEKRVLALAGKHPFLTQLHSCFQ 66 (318)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999998863 46788999999865332221 22222 577788777 6999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~ 142 (318)
T cd05570 67 TKDRLFFVMEYVNGGDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--HIKIADFGM 142 (318)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--cEEecccCC
Confidence 99999999999986 99988873 34588999999999999999999999999999999999999998 799999998
Q ss_pred CC
Q 000399 325 VG 326 (1566)
Q Consensus 325 A~ 326 (1566)
++
T Consensus 143 ~~ 144 (318)
T cd05570 143 CK 144 (318)
T ss_pred Ce
Confidence 86
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-29 Score=294.25 Aligned_cols=148 Identities=20% Similarity=0.265 Sum_probs=126.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..||+|.+....... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~nI~~~ 69 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSK------LTDNLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVTL 69 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEc------CCCcEEEEEEEecccccC-chhHHH--------HHHHHHHhcCCCCcceE
Confidence 568999999999999999998763 467889999987543221 111222 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++...+..|+||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~ 146 (301)
T cd07873 70 HDIIHTEKSLTLVFEYLDKDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (301)
T ss_pred EEEEecCCeEEEEEeccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC--cEEEC
Confidence 9999999999999999999999988743 33478888999999999999999999999999999999999998 79999
Q ss_pred CcCCCC
Q 000399 321 DKPLVG 326 (1566)
Q Consensus 321 DFGlA~ 326 (1566)
|||+++
T Consensus 147 dfg~~~ 152 (301)
T cd07873 147 DFGLAR 152 (301)
T ss_pred cCcchh
Confidence 999886
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-29 Score=291.45 Aligned_cols=148 Identities=19% Similarity=0.246 Sum_probs=126.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNK------KTGQIVAMKKIRLESEEEGVPSTAI--------REISLLKELQHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEEC------CCCcEEEEEEeccccccCCchHHHH--------HHHHHHHhcCCCCEeeeEE
Confidence 4889999999999999998853 4688899999865432222222233 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcc-cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPN-ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~-~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++..++.+|+||||++++|.+++...+. ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 144 (285)
T cd07861 67 VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG--VIKLAD 144 (285)
T ss_pred EEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC--cEEECc
Confidence 9999999999999999999888865332 5678999999999999999999999999999999999999998 799999
Q ss_pred cCCCC
Q 000399 322 KPLVG 326 (1566)
Q Consensus 322 FGlA~ 326 (1566)
||+++
T Consensus 145 fg~~~ 149 (285)
T cd07861 145 FGLAR 149 (285)
T ss_pred cccee
Confidence 99876
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=264.11 Aligned_cols=229 Identities=19% Similarity=0.281 Sum_probs=196.2
Q ss_pred hccccCCCceeccCCCCCCCCCcccccccCccCCCCceEeee------eehhhhhccCcceeeeecCcceEEEeeccCCC
Q 000399 1277 SNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS------ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1566)
Q Consensus 1277 ~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~------~l~tl~gH~~~V~slafspd~~~LaSgS~~~~ 1350 (1566)
.+...|.+||....-.. .+++.+.+++.|+++.+|++... .++.++||+..|..++.++||++.+|+|.
T Consensus 9 ~tl~gh~d~Vt~la~~~--~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw--- 83 (315)
T KOG0279|consen 9 GTLEGHTDWVTALAIKI--KNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW--- 83 (315)
T ss_pred eeecCCCceEEEEEeec--CCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc---
Confidence 34567999998842211 12455999999999999998742 67889999999999999999999999998
Q ss_pred cccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccc
Q 000399 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428 (1566)
Q Consensus 1351 ~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~ 1428 (1566)
|+++++||+.+|++.+.|.||...|.+++|+++.++++|| |.+|++||+. |.|..++....
T Consensus 84 -D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~--------------- 146 (315)
T KOG0279|consen 84 -DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDS--------------- 146 (315)
T ss_pred -cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCC---------------
Confidence 9999999999999999999999999999999999999998 9999999997 55555554321
Q ss_pred cccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhh
Q 000399 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1566)
Q Consensus 1429 ~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~ 1508 (1566)
+...|.++.|+|+ ++..+++++|.|++|++||+++.+..+.+-+| ++.|+.++
T Consensus 147 -------------~~~WVscvrfsP~--------~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh------~~~v~t~~ 199 (315)
T KOG0279|consen 147 -------------HREWVSCVRFSPN--------ESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH------SGYVNTVT 199 (315)
T ss_pred -------------CcCcEEEEEEcCC--------CCCcEEEEccCCceEEEEccCCcchhhccccc------cccEEEEE
Confidence 2567899999998 45789999999999999999999988888776 55566665
Q ss_pred ccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1509 ~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
+ ||||..+++|+.||.+.+||++.++.++++. |...|.+++|+|++
T Consensus 200 v-----------SpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnr 245 (315)
T KOG0279|consen 200 V-----------SPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNR 245 (315)
T ss_pred E-----------CCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCc
Confidence 5 4777899999999999999999999999987 78999999999974
|
|
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-29 Score=314.13 Aligned_cols=151 Identities=14% Similarity=0.081 Sum_probs=126.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||+||+|++. .++..||||++............+. +|+.+|..++|+||+++
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~------~~g~~vAvK~i~~~~~~~~~~~~~~--------~Ei~~l~~~~h~~iv~~ 96 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRV------SDGEPFAVKVVDMEGMSEADKNRAQ--------AEVCCLLNCDFFSIVKC 96 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEc------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHhcCCCCcEEEe
Confidence 458999999999999999998753 5788999999876544433333333 59999999999999999
Q ss_pred cccccccC--------ceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 241 LGLLKTSG--------LITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 241 ~~~~~~~~--------~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
++.+...+ .+++||||+++ +|.++++.. ....+++..++.++.|++.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl 176 (496)
T PTZ00283 97 HEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL 176 (496)
T ss_pred ecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE
Confidence 88875432 37899999996 999998642 23457888999999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCc
Q 000399 310 TDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~ 327 (1566)
+.++ .+||+|||+++.
T Consensus 177 ~~~~--~vkL~DFGls~~ 192 (496)
T PTZ00283 177 CSNG--LVKLGDFGFSKM 192 (496)
T ss_pred eCCC--CEEEEecccCee
Confidence 9988 799999999873
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-29 Score=303.33 Aligned_cols=192 Identities=20% Similarity=0.237 Sum_probs=168.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-C-----CC
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-H-----PN 236 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-H-----pN 236 (1566)
+|++++.||+|+||.|.+|.+. .+++.||||++++.+.- .+ .+..|+.+|..|+ | -|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~------~T~e~VAIKIiKN~k~f-------~~----Q~~~Ei~iL~~ln~~d~~~~~n 249 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDH------KTGEIVAIKIIKNKKRF-------LR----QAQIEIRILELLNKHDPDDKYN 249 (586)
T ss_pred EEEEEEEecccccceeEEEEec------CCCcEEEEEeeccChHH-------HH----HHHHHHHHHHHHhccCCCCCee
Confidence 8999999999999999999973 68999999999875422 22 2235899999997 4 38
Q ss_pred cccccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
||+++++|...+++|||+|.+..+|+++|+.++...++...++.++.||+.||.+||+.||||+|||||||||.+.....
T Consensus 250 ~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~ 329 (586)
T KOG0667|consen 250 IVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSR 329 (586)
T ss_pred EEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCc
Confidence 99999999999999999999999999999988778899999999999999999999999999999999999998877668
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
|||+|||.|...... ....+.+.+|+|||++.+..|+..+|+|+.||| .-+++.|
T Consensus 330 vKVIDFGSSc~~~q~--------------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCI-------lAEL~tG 384 (586)
T KOG0667|consen 330 IKVIDFGSSCFESQR--------------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCI-------LAELFTG 384 (586)
T ss_pred eeEEecccccccCCc--------------ceeeeeccccccchhhccCCCCCccceeehhhh-------HHhHhcC
Confidence 999999999865421 113457889999999999999999999999999 6777666
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-28 Score=288.78 Aligned_cols=152 Identities=28% Similarity=0.271 Sum_probs=127.2
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
+..++|++.+.||+|+||.||+|.++ .++..||+|.+............ ..+|+.+++.++||||+
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~--------~~~E~~~l~~l~h~~i~ 69 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDT------TSGEIVALKKVRMDNERDGIPIS--------SLREITLLLNLRHPNIV 69 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCCcch--------hhHHHHHHHhCCCCCCc
Confidence 34678999999999999999998863 46889999998754322211111 23699999999999999
Q ss_pred ccccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 239 PVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 239 ~l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++++... +.+|+||||++++|.+++... ...+++..++.++.||+.||.|||++|++||||||+||+++.++ .
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~ 146 (309)
T cd07845 70 ELKEVVVGKHLDSIFLVMEYCEQDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG--C 146 (309)
T ss_pred ceEEEEecCCCCeEEEEEecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--C
Confidence 999998755 578999999999998888743 24578889999999999999999999999999999999999988 7
Q ss_pred hhhcCcCCCCc
Q 000399 317 LYICDKPLVGF 327 (1566)
Q Consensus 317 vKL~DFGlA~~ 327 (1566)
+||+|||+++.
T Consensus 147 ~kL~dfg~~~~ 157 (309)
T cd07845 147 LKIADFGLART 157 (309)
T ss_pred EEECccceeee
Confidence 99999998863
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-29 Score=286.62 Aligned_cols=198 Identities=16% Similarity=0.220 Sum_probs=171.2
Q ss_pred cccc--ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 163 ALFP--IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 163 ~y~~--~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
-|++ .+.||+|.||+||-|+++ .+|+.||||++.+-+.......+.. .|+.||+++.||.||.+
T Consensus 563 vYQif~devLGSGQFG~VYgg~hR------ktGrdVAvKvIdKlrFp~kqesqlR--------~EVaILq~l~HPGiV~l 628 (888)
T KOG4236|consen 563 VYQIFADEVLGSGQFGTVYGGKHR------KTGRDVAVKVIDKLRFPTKQESQLR--------NEVAILQNLHHPGIVNL 628 (888)
T ss_pred HHHhhhHhhccCCcceeeecceec------ccCceeeeeeeecccCCCchHHHHH--------HHHHHHHhcCCCCeeEE
Confidence 3554 789999999999999974 6899999999999877665554443 69999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~vKL 319 (1566)
.-.|++.+.+++|||.+.|+..+.|-.+..+.+++...++++.||+.||.|||.++|+|+||||+|||+.+... .++||
T Consensus 629 e~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKl 708 (888)
T KOG4236|consen 629 ECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKL 708 (888)
T ss_pred EEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceee
Confidence 99999999999999999997777666667788999999999999999999999999999999999999987643 58999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
||||+||..... .|....+|||.|.|||++..+.|....|+|+-|+| .+-.++|.
T Consensus 709 CDFGfARiIgEk------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVI-------iYVsLSGT 763 (888)
T KOG4236|consen 709 CDFGFARIIGEK------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVI-------IYVSLSGT 763 (888)
T ss_pred ccccceeecchh------------hhhhhhcCCccccCHHHHhhccccccccceeeeEE-------EEEEeccc
Confidence 999999975521 13455679999999999999999999999999998 55556664
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=265.86 Aligned_cols=258 Identities=15% Similarity=0.215 Sum_probs=215.0
Q ss_pred CCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeE
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlW 1358 (1566)
|...|+. |+|+-.. .++++.|++|++||..++ ....++||+++|.+++|+-.|.+++|+|. |=.+++|
T Consensus 107 ~r~~vt~v~~hp~~~~-----v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSs----Dl~~~LW 177 (406)
T KOG0295|consen 107 HRSSVTRVIFHPSEAL-----VVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSS----DLSAKLW 177 (406)
T ss_pred cccceeeeeeccCceE-----EEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCC----ccchhhe
Confidence 6667777 7988887 999999999999999987 77899999999999999999999999998 8889999
Q ss_pred Eecc-cccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccc-----------cccCCCCC
Q 000399 1359 ELTR-INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDS-----------LHGGSPSS 1424 (1566)
Q Consensus 1359 Dl~t-g~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~-----------~~~~~~~~ 1424 (1566)
|..+ -+|++...||+..|.+++|.|.|.+++|| |.+|+.||+.+|-|+.++.+|...+ +.+++.+.
T Consensus 178 d~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dq 257 (406)
T KOG0295|consen 178 DFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQ 257 (406)
T ss_pred eHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCc
Confidence 9987 68999999999999999999999999998 9999999999999999999887542 22233333
Q ss_pred cccccccCCCC-CCCCcccccccccccccchhHHHhhhhh-----ccceEEEEecCceEEEEEccCCceeeeeccCCccc
Q 000399 1425 SISKINTDQVG-MLNSNTLSSGILSTAFDGNLYTCLHHIE-----CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTEL 1498 (1566)
Q Consensus 1425 ~~~~~~~~~~~-~~~~~~~~~~V~svafsp~~~t~v~~~p-----dg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v 1498 (1566)
.+.+|...... ...+..|...|.+++|.|.....-..-. .|.++.+||.|++||+||+.+|.|+.++.+|
T Consensus 258 tl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~gh---- 333 (406)
T KOG0295|consen 258 TLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGH---- 333 (406)
T ss_pred eEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecc----
Confidence 34444433332 2345568889999999887321111111 2469999999999999999999999999987
Q ss_pred CchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1499 GFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1499 ~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
..+|+.++|+ |.|++|+|+.+|+++++||++++++..++.+|+..|++++|+.+
T Consensus 334 --dnwVr~~af~-----------p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~ 387 (406)
T KOG0295|consen 334 --DNWVRGVAFS-----------PGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKT 387 (406)
T ss_pred --cceeeeeEEc-----------CCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCC
Confidence 5567777765 66689999999999999999999999999999999999999754
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=262.86 Aligned_cols=222 Identities=17% Similarity=0.340 Sum_probs=198.8
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~t 1354 (1566)
....|.+||+| +-|...| ++|||.|++|+|||+.++ ...++.||-..|+.|++|+-..++++++. |+.
T Consensus 146 Vi~gHlgWVr~vavdP~n~w-----f~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge----dk~ 216 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEW-----FATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE----DKQ 216 (460)
T ss_pred hhhhccceEEEEeeCCCcee-----EEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC----CCe
Confidence 35579999999 6887787 999999999999999988 55789999999999999999999999998 999
Q ss_pred eeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccC
Q 000399 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1566)
Q Consensus 1355 VrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~ 1432 (1566)
|+.||++..+.++.|.||-+.|+|++.+|....|++| |.++||||+++...+.++.+|
T Consensus 217 VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH-------------------- 276 (460)
T KOG0285|consen 217 VKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGH-------------------- 276 (460)
T ss_pred eEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCC--------------------
Confidence 9999999999999999999999999999999999888 999999999999999999886
Q ss_pred CCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCC
Q 000399 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1566)
Q Consensus 1433 ~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~ 1512 (1566)
...|.+|.+.|. ...+++||.|++||+||++.|+...++..| ...|++++.+|.
T Consensus 277 ----------~~~V~~V~~~~~----------dpqvit~S~D~tvrlWDl~agkt~~tlt~h------kksvral~lhP~ 330 (460)
T KOG0285|consen 277 ----------TNPVASVMCQPT----------DPQVITGSHDSTVRLWDLRAGKTMITLTHH------KKSVRALCLHPK 330 (460)
T ss_pred ----------CCcceeEEeecC----------CCceEEecCCceEEEeeeccCceeEeeecc------cceeeEEecCCc
Confidence 445667776665 457999999999999999999999888866 445677777765
Q ss_pred CcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1513 ~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
. ..+||+|.|+ |+-|++..|..++.+.+|+.-|++++.+.||
T Consensus 331 e-----------~~fASas~dn-ik~w~~p~g~f~~nlsgh~~iintl~~nsD~ 372 (460)
T KOG0285|consen 331 E-----------NLFASASPDN-IKQWKLPEGEFLQNLSGHNAIINTLSVNSDG 372 (460)
T ss_pred h-----------hhhhccCCcc-ceeccCCccchhhccccccceeeeeeeccCc
Confidence 4 5788999886 8999999999999999999999999998876
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-28 Score=283.30 Aligned_cols=148 Identities=20% Similarity=0.250 Sum_probs=127.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||.||+|++. .++..+|||.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEEC------CCCCEEEEEEccccccccccchHHH--------HHHHHHHhcCCCCCcchhh
Confidence 4889999999999999998753 4678899998865432222222333 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++.+.+..++||||++++|.+++...+...+++..++.++.|++.||.|||++|++||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~--~~~l~df 144 (284)
T cd07860 67 VIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADF 144 (284)
T ss_pred hcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEeec
Confidence 99999999999999988999988765556688889999999999999999999999999999999999998 7999999
Q ss_pred CCCC
Q 000399 323 PLVG 326 (1566)
Q Consensus 323 GlA~ 326 (1566)
|+++
T Consensus 145 g~~~ 148 (284)
T cd07860 145 GLAR 148 (284)
T ss_pred cchh
Confidence 9876
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-27 Score=290.31 Aligned_cols=212 Identities=19% Similarity=0.364 Sum_probs=192.6
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee--------------------------------eehhhhhccCcceeeeec
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS--------------------------------ILSSIRAHHGALRSVAVG 1336 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~--------------------------------~l~tl~gH~~~V~slafs 1336 (1566)
||+|++. ||.|-.|..|++|.+... ...++.||+++|..+.|+
T Consensus 386 fSddssm-----lA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFs 460 (707)
T KOG0263|consen 386 FSDDSSM-----LACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFS 460 (707)
T ss_pred ecCCcch-----hhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeec
Confidence 8888887 999999999999988621 223578999999999999
Q ss_pred CcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccc
Q 000399 1337 QDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM 1414 (1566)
Q Consensus 1337 pd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~ 1414 (1566)
||.++|+|+|. |++||+|.+.+..|+-.|+||..+|+++.|+|-|-++||+ |++.++|.....++++.+.+|
T Consensus 461 Pd~rfLlScSE----D~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifagh-- 534 (707)
T KOG0263|consen 461 PDRRFLLSCSE----DSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGH-- 534 (707)
T ss_pred ccccceeeccC----CcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccc--
Confidence 99999999998 9999999999999999999999999999999999999877 999999999999999988876
Q ss_pred cccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccC
Q 000399 1415 DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1494 (1566)
Q Consensus 1415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h 1494 (1566)
-+.|.|++|||+ +.++++||.|.+||+||+.+|..++.|.||
T Consensus 535 ----------------------------lsDV~cv~FHPN----------s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH 576 (707)
T KOG0263|consen 535 ----------------------------LSDVDCVSFHPN----------SNYVATGSSDRTVRLWDVSTGNSVRIFTGH 576 (707)
T ss_pred ----------------------------ccccceEEECCc----------ccccccCCCCceEEEEEcCCCcEEEEecCC
Confidence 345778888887 899999999999999999999999999987
Q ss_pred CcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1495 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1495 ~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.++|.+++|+ |+|++||+|+.||.|++||+.+|+++..+.+|++.|.+|.|+.||
T Consensus 577 ------~~~V~al~~S-----------p~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg 631 (707)
T KOG0263|consen 577 ------KGPVTALAFS-----------PCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDG 631 (707)
T ss_pred ------CCceEEEEEc-----------CCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCC
Confidence 5566777765 677899999999999999999999999999999999999999987
|
|
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-29 Score=274.37 Aligned_cols=214 Identities=17% Similarity=0.170 Sum_probs=180.9
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.+++|..++.||+|+||+|.+|+.+ .+++.+|+|+++++-+...+.... .+.|-++|+..+||.+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEK------at~k~YAiKIlkKeviiakdEVAH-------TlTE~RVL~~~~HPFLt~ 232 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREK------ATGKLYAIKILKKEVIIAKDEVAH-------TLTENRVLQNCRHPFLTS 232 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeec------ccCceeehhhhhhhheeehHHhhh-------hhhHHHHHHhccCcHHHH
Confidence 4679999999999999999998864 689999999999876655443322 247999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
|...|++.+.+|+||||+.| .|+-.|. +...+++..++++..+|+.||.|||+++||+||||.+|+|++.+| ++|
T Consensus 233 LKYsFQt~drlCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG--HIK 308 (516)
T KOG0690|consen 233 LKYSFQTQDRLCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG--HIK 308 (516)
T ss_pred hhhhhccCceEEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--ceE
Confidence 99999999999999999997 9998887 356699999999999999999999999999999999999999999 899
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc-CC
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW-GD 397 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~-~d 397 (1566)
|+|||+++..... +. ...+++|||.|.|||++...+|+..+|+|..|++ ++++.+||-+ ..
T Consensus 309 itDFGLCKE~I~~-----g~------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVV-------MYEMmCGRLPFyn 370 (516)
T KOG0690|consen 309 ITDFGLCKEEIKY-----GD------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVV-------MYEMMCGRLPFYN 370 (516)
T ss_pred eeecccchhcccc-----cc------eeccccCChhhcCchhhccccccceeehhhhhHH-------HHHHHhccCcccc
Confidence 9999999964421 11 2234569999999999999999999999999988 8899999874 33
Q ss_pred ccceeecceeE
Q 000399 398 YTFHMVMPWVI 408 (1566)
Q Consensus 398 l~q~pv~pwv~ 408 (1566)
-.+...|--|+
T Consensus 371 ~dh~kLFeLIl 381 (516)
T KOG0690|consen 371 KDHEKLFELIL 381 (516)
T ss_pred cchhHHHHHHH
Confidence 33334444444
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-28 Score=291.93 Aligned_cols=210 Identities=18% Similarity=0.176 Sum_probs=171.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhc-cccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVL-GSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~-vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.......+.||+|+||+||+|.. .|.. ||+|++...........+|. +|+.+|.+++|||||+
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~--------~g~~~vavK~~~~~~~~~~~~~~f~--------~E~~il~~l~HpNIV~ 103 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKW--------RGTDVVAVKIISDPDFDDESRKAFR--------REASLLSRLRHPNIVQ 103 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEe--------CCceeEEEEEecchhcChHHHHHHH--------HHHHHHHhCCCCCeee
Confidence 34566677799999999998763 4566 99999987655544444555 5999999999999999
Q ss_pred ccccccccC-ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhcc-ccCCCccCCCccccccchhh
Q 000399 240 VLGLLKTSG-LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG-IAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~~~-~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~g-IiHrDLKp~NILl~~~~~~~ 316 (1566)
++|++.... .++|||||+++ +|.+++.......++...+..++.||++||.|||+++ ||||||||+|||++.+. .+
T Consensus 104 f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~ 182 (362)
T KOG0192|consen 104 FYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KT 182 (362)
T ss_pred EEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CE
Confidence 999999887 79999999996 9999998543566889999999999999999999999 99999999999999985 26
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc--ccchhhccccccccccCCchhhhHHHhhccc-
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR- 393 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~--~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr- 393 (1566)
+||||||+++...... ...+...||+.|||||++. ...|+.++|+|+.|.+ ..+.++|+
T Consensus 183 ~KI~DFGlsr~~~~~~-----------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIv-------lWEl~t~~~ 244 (362)
T KOG0192|consen 183 LKIADFGLSREKVISK-----------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIV-------LWELLTGEI 244 (362)
T ss_pred EEECCCccceeecccc-----------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHH-------HHHHHHCCC
Confidence 9999999998654210 0112245999999999999 6699999999999987 78888885
Q ss_pred ccCCccceeecc
Q 000399 394 RWGDYTFHMVMP 405 (1566)
Q Consensus 394 s~~dl~q~pv~p 405 (1566)
+|.++..-.+.-
T Consensus 245 Pf~~~~~~~~~~ 256 (362)
T KOG0192|consen 245 PFEDLAPVQVAS 256 (362)
T ss_pred CCCCCCHHHHHH
Confidence 566665433333
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-28 Score=288.85 Aligned_cols=187 Identities=20% Similarity=0.168 Sum_probs=158.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.+++++.||+|-||+||+|+. .....||+|.++......+ .|+ +|+++|++|+|+|||+++
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~-------~~~~~vavk~ik~~~m~~~---~f~--------~Ea~iMk~L~H~~lV~l~ 267 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKW-------NGSTKVAVKTIKEGSMSPE---AFL--------REAQIMKKLRHEKLVKLY 267 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEE-------cCCCcccceEEeccccChh---HHH--------HHHHHHHhCcccCeEEEE
Confidence 3678899999999999998884 3455899999987644433 455 599999999999999999
Q ss_pred ccccccCceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++.+|||||||+ |+|.++|+...+..+.......++.|||+||+||+++++|||||.+.||||+++. .+||+
T Consensus 268 gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--~vKIs 345 (468)
T KOG0197|consen 268 GVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--VVKIS 345 (468)
T ss_pred EEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--eEEEc
Confidence 99999999999999999 5999999975566788888999999999999999999999999999999999999 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+||.... +.+......+ -...|.|||.+....++.+.|+|+.|++
T Consensus 346 DFGLAr~~~d-~~Y~~~~~~k---------fPIkWtAPEa~~~~~FS~kSDVWSFGVl 393 (468)
T KOG0197|consen 346 DFGLARLIGD-DEYTASEGGK---------FPIKWTAPEALNYGKFSSKSDVWSFGVL 393 (468)
T ss_pred ccccccccCC-CceeecCCCC---------CCceecCHHHHhhCCcccccceeehhhh
Confidence 9999995442 2222222222 3445899999999999999999999987
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=254.60 Aligned_cols=258 Identities=16% Similarity=0.251 Sum_probs=213.5
Q ss_pred hhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee--eehhhhhccCcceeeeecCcceEEEeeccCCCc
Q 000399 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS--ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1566)
Q Consensus 1276 ~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~--~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~ 1351 (1566)
......|++.|.. |+|+|.. |||||.|..|.+|++.+. ...+++||.++|..+.|..|++.++|+|.
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~-----~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gt---- 110 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSC-----FASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGT---- 110 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCe-----EeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecC----
Confidence 4456679999998 9999998 999999999999998764 45567799999999999999999999999
Q ss_pred ccceeeEEecccccccccccccccccceEEeecCCce-eec--cCcEEEeecCCCcEEEEeecc----------cccccc
Q 000399 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQ----------SMDSLH 1418 (1566)
Q Consensus 1352 D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg~~l~~l~~h----------~~~~~~ 1418 (1566)
|++|+.||+++|++++.+++|.+-|++++-+.-|..+ .|+ |++++|||+++..+++++... ....+.
T Consensus 111 Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~ 190 (338)
T KOG0265|consen 111 DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVI 190 (338)
T ss_pred CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccccccee
Confidence 9999999999999999999999999999854445555 466 999999999988887776322 112334
Q ss_pred cCCCCCcccccccCCC-CCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccC----Cceeeeecc
Q 000399 1419 GGSPSSSISKINTDQV-GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQ----GQKLHLWRG 1493 (1566)
Q Consensus 1419 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~t----g~~l~~~~~ 1493 (1566)
.+.-++.+++|+.... ....+.+|...|..++.++. |..+.+-+.|.++++||++. .+++..+.+
T Consensus 191 sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~----------gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g 260 (338)
T KOG0265|consen 191 SGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRY----------GSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQG 260 (338)
T ss_pred eccccCceeeeccccCcceEEeecccCceeeEEeccC----------CCccccccccceEEEEEecccCCCCceEEEeec
Confidence 4555667788887544 34556788888888888876 99999999999999999985 366888888
Q ss_pred CCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1494 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1494 h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
|.... ..+ ...++++|++..+.+|+.|..+++||+.+...+..|+||.+.|++++|+|.
T Consensus 261 ~~hnf----ekn---------lL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~ 319 (338)
T KOG0265|consen 261 HIHNF----EKN---------LLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPT 319 (338)
T ss_pred chhhh----hhh---------cceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCC
Confidence 74322 111 234678899999999999999999999999999999999999999999995
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=252.62 Aligned_cols=223 Identities=16% Similarity=0.291 Sum_probs=197.5
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-------eehhhhhccCcceeeeecCcceEEEeeccCC
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-------ILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-------~l~tl~gH~~~V~slafspd~~~LaSgS~~~ 1349 (1566)
.+.-+.||.. |+|.|+. +|+||-|+...||++.+. ..+.+.||++-+.|+.|-+|+ .++|||.
T Consensus 93 ipl~s~WVMtCA~sPSg~~-----VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SG-- 164 (343)
T KOG0286|consen 93 IPLPSSWVMTCAYSPSGNF-----VACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGSG-- 164 (343)
T ss_pred EecCceeEEEEEECCCCCe-----EEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCC-ceEecCC--
Confidence 3445789987 9999998 999999999999998743 456789999999999998855 5778887
Q ss_pred CcccceeeEEecccccccccccccccccceEEee-cCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcc
Q 000399 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1426 (1566)
Q Consensus 1350 ~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp-~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~ 1426 (1566)
|.|+.+||+++|+.+..|.||.+.|.+++++| +++.++|| |++.+|||++.+.++++|.+|
T Consensus 165 --D~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh-------------- 228 (343)
T KOG0286|consen 165 --DMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH-------------- 228 (343)
T ss_pred --CceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccc--------------
Confidence 99999999999999999999999999999999 78888877 999999999999999999886
Q ss_pred cccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHH
Q 000399 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1566)
Q Consensus 1427 ~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~s 1506 (1566)
..-|++|.|.|+ |.-+++||.|++.|+||+|..+.+..|..... ...|++
T Consensus 229 ----------------esDINsv~ffP~----------G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~----~~gitS 278 (343)
T KOG0286|consen 229 ----------------ESDINSVRFFPS----------GDAFATGSDDATCRLYDLRADQELAVYSHDSI----ICGITS 278 (343)
T ss_pred ----------------ccccceEEEccC----------CCeeeecCCCceeEEEeecCCcEEeeeccCcc----cCCcee
Confidence 455888999887 89999999999999999999999999985422 344555
Q ss_pred hhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1507 v~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
++| |..|++|++|..|.++.+||+-.++.+..+.||++.|+||..+|||
T Consensus 279 v~F-----------S~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG 327 (343)
T KOG0286|consen 279 VAF-----------SKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDG 327 (343)
T ss_pred EEE-----------cccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCC
Confidence 555 5677899999999999999999999999999999999999999998
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-27 Score=261.25 Aligned_cols=321 Identities=16% Similarity=0.197 Sum_probs=241.5
Q ss_pred HHHHHhhhcccceeecccccccccccccccCcccC----CCCcCccCc---cceeecccccccccCCCCcccccc---cc
Q 000399 1189 LEQFLLRYHNWKWEYTGESSRISEENISAKRPLLN----KGSTSQCNP---AKLLLNGVGWSIPQSQGSRSSKNL---IP 1258 (1566)
Q Consensus 1189 ~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~g~s~~~~~~~~~~~~~---i~ 1258 (1566)
-|+|+.+++...++|++|.+.|+- ..++.|...- ++-..-..| ..++.+.+.| .|.||...-+.. ..
T Consensus 111 peRy~~lE~ll~R~YFDp~EaY~d-ssKEkrRa~IAQ~ls~EV~VVppSRLlaLlGQaLKW--QqHQGLLPPGt~iDLFR 187 (508)
T KOG0275|consen 111 PERYIRLENLLNRSYFDPREAYGD-SSKEKRRAVIAQALSGEVHVVPPSRLLALLGQALKW--QQHQGLLPPGTTIDLFR 187 (508)
T ss_pred hHHHHHHHHHhcccccChhhhcCc-chHHHHHHHHHHHhcCceEEcChHHHHHHHHHHhhh--HhhcCCCCCCceeeecc
Confidence 367888888888899988887763 4455544321 111222334 3345667779 577886553332 12
Q ss_pred ccccccc-ccchHHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeeeh---------hhhhc
Q 000399 1259 QRRVYDY-HKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILS---------SIRAH 1326 (1566)
Q Consensus 1259 ~~~~~~l-e~~~~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~---------tl~gH 1326 (1566)
-++..+- +...-...+...........+-| |||||++ |++||.||-|.+||..++.++ .+..|
T Consensus 188 GkAA~K~~~Ee~~Pt~l~r~IKFg~KSh~EcA~FSPDgqy-----LvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMm 262 (508)
T KOG0275|consen 188 GKAAMKDQEEERYPTQLARSIKFGQKSHVECARFSPDGQY-----LVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMM 262 (508)
T ss_pred chhhhhhhHhhhchHHhhhheecccccchhheeeCCCCce-----Eeeccccceeeeehhccchhhhhhhhhhhcceeec
Confidence 2222111 00111112222333334445555 9999999 999999999999999887442 45568
Q ss_pred cCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccc-cccccccceEEeecCCceeec--cCcEEEeecCCC
Q 000399 1327 HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1403 (1566)
Q Consensus 1327 ~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~-gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg 1403 (1566)
..+|.|++|+.|..+++||+. ||.|+||.+.+|.|++.|. .|+..|+|+.|+.++..+.|+ |.+++|..+.+|
T Consensus 263 d~aVlci~FSRDsEMlAsGsq----DGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSG 338 (508)
T KOG0275|consen 263 DDAVLCISFSRDSEMLASGSQ----DGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSG 338 (508)
T ss_pred ccceEEEeecccHHHhhccCc----CCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccc
Confidence 999999999999999999999 9999999999999999996 899999999999999999766 999999999999
Q ss_pred cEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEcc
Q 000399 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1566)
Q Consensus 1404 ~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~ 1483 (1566)
+++..+.+|+ +.|+...|.++ |..++++|+||+|++|+..
T Consensus 339 K~LKEfrGHs------------------------------Syvn~a~ft~d----------G~~iisaSsDgtvkvW~~K 378 (508)
T KOG0275|consen 339 KCLKEFRGHS------------------------------SYVNEATFTDD----------GHHIISASSDGTVKVWHGK 378 (508)
T ss_pred hhHHHhcCcc------------------------------ccccceEEcCC----------CCeEEEecCCccEEEecCc
Confidence 9999998874 44666667665 9999999999999999999
Q ss_pred CCceeeeeccCCcccCchhhHHHhhcc----------------------------------CCCcccCCCcccchhHHHh
Q 000399 1484 QGQKLHLWRGEPTELGFPSLVSAICAC----------------------------------GSEKMQAGGAVASPSWIAA 1529 (1566)
Q Consensus 1484 tg~~l~~~~~h~~~v~~~~~V~sv~~s----------------------------------~~~~~~~~~~spdg~~LaS 1529 (1566)
+++|+.+|+..... -.|++|-.- ..+.|.++..||.|.|+.+
T Consensus 379 tteC~~Tfk~~~~d----~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYc 454 (508)
T KOG0275|consen 379 TTECLSTFKPLGTD----YPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYC 454 (508)
T ss_pred chhhhhhccCCCCc----ccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEE
Confidence 99999998865321 122222111 1234556668999999999
Q ss_pred ccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1530 GLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1530 Gs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
.+.|+.++.|.+.+|++-.++..|+..|..++.+|.
T Consensus 455 igED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPH 490 (508)
T KOG0275|consen 455 IGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPH 490 (508)
T ss_pred EccCcEEEEEEeecCceeeeeecccccccccccCcc
Confidence 999999999999999999999999999999999884
|
|
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.2e-28 Score=263.56 Aligned_cols=197 Identities=15% Similarity=0.169 Sum_probs=172.2
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+-|.++.+||+|+||.||+|.++ +.|.++|||.+..+ .+..+.+ .|+.||++++.|+||++|
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~------EsG~v~AIK~VPV~----sDLQEII--------KEISIMQQC~S~yVVKYY 94 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHR------ESGHVLAIKKVPVD----TDLQEII--------KEISIMQQCKSKYVVKYY 94 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHh------ccCcEEEEEecCcc----chHHHHH--------HHHHHHHHcCCchhhhhh
Confidence 45899999999999999999985 79999999998653 3344555 499999999999999999
Q ss_pred ccccccCceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
|.+.....+|||||||+ |++.++++. +++++++.++.-+++..++||+|||...-||||||..|||++.+| +.||+
T Consensus 95 GSYFK~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G--~AKLA 171 (502)
T KOG0574|consen 95 GSYFKHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG--IAKLA 171 (502)
T ss_pred hhhccCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--hhhhh
Confidence 99999999999999999 599999984 567799999999999999999999999999999999999999999 89999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc-CC
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW-GD 397 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~-~d 397 (1566)
|||+|..... .+. ...+.+|||+|||||++....|+...|+|+.|.- .+++.-||++ .|
T Consensus 172 DFGVAGQLTD-------TMA----KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGIT-------aIEMAEG~PPYsD 231 (502)
T KOG0574|consen 172 DFGVAGQLTD-------TMA----KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGIT-------AIEMAEGRPPYSD 231 (502)
T ss_pred hccccchhhh-------hHH----hhCccccCcccccHHHHHHhccchhhhHhhhcch-------hhhhhcCCCCccc
Confidence 9999986552 111 1234579999999999999999999999999955 7889999985 44
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-28 Score=249.58 Aligned_cols=189 Identities=19% Similarity=0.205 Sum_probs=159.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|...++||+|+||+||+|++ .+++.+||+|.+..+..... ++.+++||+.+|+.++|.|||+++
T Consensus 2 ~~ydkmekigegtygtvfkarn------~~t~eivalkrvrlddddeg--------vpssalreicllkelkhknivrl~ 67 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARN------RETHEIVALKRVRLDDDDEG--------VPSSALREICLLKELKHKNIVRLH 67 (292)
T ss_pred cchHHHHhhcCCcceeeEeccc------CCccceEEEEEEeccCCCCC--------CcHHHHHHHHHHHHhhhcceeehh
Confidence 3688889999999999999996 37899999999886543322 223456899999999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++...+..+.+|+|||..+|..+.... ++-+....++.++.|+++||.+||++++.||||||.|+||+.+| .+|++|
T Consensus 68 dvlhsdkkltlvfe~cdqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng--elklad 144 (292)
T KOG0662|consen 68 DVLHSDKKLTLVFEFCDQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG--ELKLAD 144 (292)
T ss_pred hhhccCceeEEeHHHhhHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC--cEEecc
Confidence 999999999999999999999998753 45578888999999999999999999999999999999999999 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhcccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGEL 378 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~i 378 (1566)
||+||.... .+.|++.. +-|.+|++|.++.+. -|+...|+|+.|||
T Consensus 145 fglarafgi----------pvrcysae-vvtlwyrppdvlfgakly~tsidmwsagci 191 (292)
T KOG0662|consen 145 FGLARAFGI----------PVRCYSAE-VVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191 (292)
T ss_pred cchhhhcCC----------ceEeeece-eeeeeccCcceeeeeehhccchHhhhcchH
Confidence 999996442 12333322 458899999987654 57889999999998
|
|
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-28 Score=292.88 Aligned_cols=210 Identities=16% Similarity=0.167 Sum_probs=164.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|.++ .++..||||++.+.........+.+. +|+++|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~hp~iv~~~ 67 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKK------DTGKIYAMKTLLKSEMFKKDQLAHVK-------AERDVLAESDSPWVVSLY 67 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhHHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 36899999999999999998763 57889999998764332222222222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+.+.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~--~~kl~ 143 (377)
T cd05629 68 YSFQDAQYLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIKLS 143 (377)
T ss_pred EEEEcCCeeEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEEe
Confidence 999999999999999986 99999973 45678999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCcccccccc------CCC--CCCc---------------------e-------eeeecCCccccccccccccccc
Q 000399 321 DKPLVGFNSIADWC------TIP--TSPM---------------------I-------GCCIEGCSSQGLYADLKLSQSM 364 (1566)
Q Consensus 321 DFGlA~~~~~~~~~------~~~--~~~~---------------------~-------~~~~~~~~gt~~Y~APE~l~~~ 364 (1566)
|||+++........ ... .... . ........||+.|+|||++.+.
T Consensus 144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 223 (377)
T cd05629 144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ 223 (377)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence 99999742210000 000 0000 0 0001124689999999999988
Q ss_pred chhhccccccccccCCchhhhHHHhhccccc
Q 000399 365 DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 365 ~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
.|+..+|+|+.|++ .+..+.|+.+
T Consensus 224 ~~~~~~DiwSlGvi-------l~elltG~~P 247 (377)
T cd05629 224 GYGQECDWWSLGAI-------MFECLIGWPP 247 (377)
T ss_pred CCCCceeeEecchh-------hhhhhcCCCC
Confidence 99999999999998 6677778754
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-26 Score=280.69 Aligned_cols=221 Identities=17% Similarity=0.254 Sum_probs=195.9
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
+....|++.|+. |+|+-++ |+++|.|++||+|.+.+. ++..++||..+|++|.|+|-|-+|||||. |+
T Consensus 445 ~~L~GH~GPVyg~sFsPd~rf-----LlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~----D~ 515 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSFSPDRRF-----LLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASH----DQ 515 (707)
T ss_pred EEeecCCCceeeeeecccccc-----eeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCC----Cc
Confidence 347789999998 9999998 999999999999999986 78888999999999999999999999998 99
Q ss_pred ceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccccccc
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1431 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~ 1431 (1566)
|-++|.....++.+.+.||-+.|.|+.|+|.+.++++| |.+||+||+.+|..++.|.+|
T Consensus 516 tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH------------------- 576 (707)
T KOG0263|consen 516 TARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH------------------- 576 (707)
T ss_pred eeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC-------------------
Confidence 99999999999999999999999999999999999988 999999999999999999876
Q ss_pred CCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccC
Q 000399 1432 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1511 (1566)
Q Consensus 1432 ~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~ 1511 (1566)
...|.+++|+|+ |++|++|+.||.|++||+.+|+.+.++.+| ++.|.++.|
T Consensus 577 -----------~~~V~al~~Sp~----------Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~H------t~ti~SlsF-- 627 (707)
T KOG0263|consen 577 -----------KGPVTALAFSPC----------GRYLASGDEDGLIKIWDLANGSLVKQLKGH------TGTIYSLSF-- 627 (707)
T ss_pred -----------CCceEEEEEcCC----------CceEeecccCCcEEEEEcCCCcchhhhhcc------cCceeEEEE--
Confidence 456788888876 999999999999999999999999999988 344566655
Q ss_pred CCcccCCCcccchhHHHhccCCCceeEEeeccC--c----------------------eeEEeeccCceeeEeeee
Q 000399 1512 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG--N----------------------VIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1512 ~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg--k----------------------~l~~l~gH~~~V~~Vafs 1563 (1566)
|.+|..||+|+.|++|++||+..- . ++.++.....+|.+|.|.
T Consensus 628 ---------S~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~Ft 694 (707)
T KOG0263|consen 628 ---------SRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFT 694 (707)
T ss_pred ---------ecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEe
Confidence 477789999999999999998632 2 455666666777777775
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-27 Score=282.56 Aligned_cols=191 Identities=18% Similarity=0.187 Sum_probs=168.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+.++.||+|+||.++.++++ .+...+++|.+.-.+......... ..|+.++++++|||||.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk------~~~~~~vlK~I~l~~~t~~~r~~A--------~~E~~lis~~~hP~iv~y 68 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHK------SDDKLYVLKKINLEKLTEPERRSA--------IQEMDLLSKLLHPNIVEY 68 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhc------cCCceEEEEEEeccccCchhhHHH--------HHHHHHHHhccCCCeeee
Confidence 568999999999999999999985 466789999998776555443323 369999999999999999
Q ss_pred cccccccCc-eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 241 LGLLKTSGL-ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~-l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++.|..++. ++|||+||+| +|.+.|...++..+++..+..|+.|++.|+.|||+++|+|||||+.||+++.++ .||
T Consensus 69 ~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--~Vk 146 (426)
T KOG0589|consen 69 KDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--KVK 146 (426)
T ss_pred ccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--cee
Confidence 999999988 9999999997 999999977767899999999999999999999999999999999999999999 789
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|.|||+|+...... .+..+++|||.||.||++.+.+|+.+.|+|+.||+
T Consensus 147 LgDfGlaK~l~~~~-----------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~ 195 (426)
T KOG0589|consen 147 LGDFGLAKILNPED-----------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCC 195 (426)
T ss_pred ecchhhhhhcCCch-----------hhhheecCCCcccCHHHhCCCCCCccCcchhhcch
Confidence 99999999766311 12345679999999999999999999999999998
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.8e-28 Score=292.31 Aligned_cols=211 Identities=15% Similarity=0.142 Sum_probs=167.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||+||+|+++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~~~~~~iv~~~ 67 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKK------DTGHVYAMKILRKADMLEKEQVGHIR-------AERDILVEADSLWVVKMF 67 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 36999999999999999998863 46889999999764332222222232 689999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+...+|+||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~--~vkL~ 143 (363)
T cd05628 68 YSFQDKLNLYLIMEFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVKLS 143 (363)
T ss_pred EEEecCCeEEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--CEEEe
Confidence 999999999999999987 99999973 45688999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCC--------CC---------CCc-------eeeeecCCcccccccccccccccchhhcccccccc
Q 000399 321 DKPLVGFNSIADWCTI--------PT---------SPM-------IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~--------~~---------~~~-------~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G 376 (1566)
|||+++.......... .. ... ........+||+.|+|||++.+..++..+|+|+.|
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG 223 (363)
T cd05628 144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (363)
T ss_pred eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence 9999985432100000 00 000 00011234699999999999998999999999999
Q ss_pred ccCCchhhhHHHhhcccccC
Q 000399 377 ELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 377 ~isnfeyL~~ln~~agrs~~ 396 (1566)
++ .+.++.|+.+.
T Consensus 224 vi-------l~ell~G~~Pf 236 (363)
T cd05628 224 VI-------MYEMLIGYPPF 236 (363)
T ss_pred HH-------HHHHHhCCCCC
Confidence 88 77777887653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-27 Score=284.78 Aligned_cols=149 Identities=27% Similarity=0.374 Sum_probs=125.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.+.+.||+|+||.||+|++. .++..||||.+............+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~ni~~~ 69 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNS------ETNEKVAIKKIANAFDNRIDAKRTL--------REIKLLRHLDHENVIAI 69 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEec------CCCCeEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCccch
Confidence 457999999999999999998863 5789999999875422222222233 59999999999999999
Q ss_pred ccccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 241 LGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 241 ~~~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++++... ..+|+||||++++|.+++.. .+.+++..++.++.|++.||.|||+++++||||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~-- 145 (337)
T cd07858 70 KDIMPPPHREAFNDVYIVYELMDTDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC-- 145 (337)
T ss_pred HHheecccccccCcEEEEEeCCCCCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--
Confidence 9988654 35899999999999998873 34588999999999999999999999999999999999999988
Q ss_pred hhhhcCcCCCCc
Q 000399 316 WLYICDKPLVGF 327 (1566)
Q Consensus 316 ~vKL~DFGlA~~ 327 (1566)
.+||+|||+++.
T Consensus 146 ~~kL~Dfg~~~~ 157 (337)
T cd07858 146 DLKICDFGLART 157 (337)
T ss_pred CEEECcCccccc
Confidence 799999998873
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-27 Score=292.66 Aligned_cols=209 Identities=14% Similarity=0.154 Sum_probs=165.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||+||+|++. .++..+|+|++.+.........+.+. +|+.+|+.++|||||++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~~~h~~iv~~~~ 68 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKV------DTKALYAMKTLRKKDVLLRNQVAHVK-------AERDILAEADNEWVVRLYY 68 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEEC------CCCCEEEEEEEeHHHhhhHHHHHHHH-------HHHHHHHhCCCCcCCeEEE
Confidence 5899999999999999998863 57889999998764332222222222 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+.+++.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g--~~kL~D 144 (382)
T cd05625 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 144 (382)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEeE
Confidence 99999999999999986 99999873 34578899999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccc---cCCC---------------------------------CCCceeeeecCCcccccccccccccccc
Q 000399 322 KPLVGFNSIADW---CTIP---------------------------------TSPMIGCCIEGCSSQGLYADLKLSQSMD 365 (1566)
Q Consensus 322 FGlA~~~~~~~~---~~~~---------------------------------~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 365 (1566)
||+|+....... .... ......+.....+||+.|+|||++.+..
T Consensus 145 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (382)
T cd05625 145 FGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG 224 (382)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC
Confidence 999863221000 0000 0000011123456999999999999999
Q ss_pred hhhccccccccccCCchhhhHHHhhccccc
Q 000399 366 WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 366 y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+..+|+|+.|++ .+.++.|+.+
T Consensus 225 ~~~~~DiwSlGvi-------l~elltG~~P 247 (382)
T cd05625 225 YTQLCDWWSVGVI-------LYEMLVGQPP 247 (382)
T ss_pred CCCeeeEEechHH-------HHHHHhCCCC
Confidence 9999999999988 7777888764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-27 Score=280.26 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=182.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
-|..++.||-|+||+|.+++. ..+..++|+|.+.+...........++ .|..||...+.+.||+||.
T Consensus 630 mFvkik~iGvGAFGeV~Lv~K------vDT~~lYAmKTLrKaDVl~rnQvaHVK-------AERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRK------VDTRALYAMKTLRKADVLMRNQVAHVK-------AERDILAEADNEWVVRLYY 696 (1034)
T ss_pred ceEEEeeecccccceeEEEee------cchhhHHHHhhhHHHHHHhhhhhhhhh-------hhhhhHhhcCCcceEEEEE
Confidence 578899999999999999874 467999999999987665555555555 7999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.|.+++++|+||||++| ++..+|- +.+.|.|..++||+.++..|+++.|..|+|||||||+|||||.+| ++||+|
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG--HIKLTD 772 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 772 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC--ceeeee
Confidence 99999999999999997 9999887 467899999999999999999999999999999999999999999 899999
Q ss_pred cCCCCcccc---ccccCCCCC----------------------------CceeeeecCCcccccccccccccccchhhcc
Q 000399 322 KPLVGFNSI---ADWCTIPTS----------------------------PMIGCCIEGCSSQGLYADLKLSQSMDWHSQF 370 (1566)
Q Consensus 322 FGlA~~~~~---~~~~~~~~~----------------------------~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~ 370 (1566)
|||+.-... ...+..+.- ....|.....+||+-|+|||++....|+..|
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 999863221 000100000 0112334466899999999999999999999
Q ss_pred ccccccccCCchhhhHHHhhccccc-CC----ccceeecceeE
Q 000399 371 NRWWRGELSNFEYLLFLNKLAGRRW-GD----YTFHMVMPWVI 408 (1566)
Q Consensus 371 d~Ws~G~isnfeyL~~ln~~agrs~-~d----l~q~pv~pwv~ 408 (1566)
|+|+.|+| +++++-||.. .+ -+||.|.-|-.
T Consensus 853 dwws~gvi-------l~em~~g~~pf~~~tp~~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 853 DWWSVGVI-------LYEMLVGQPPFLADTPGETQYKVINWRN 888 (1034)
T ss_pred hhhHhhHH-------HHHHhhCCCCccCCCCCcceeeeeehhh
Confidence 99999998 7888888874 22 25677777754
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-27 Score=292.20 Aligned_cols=209 Identities=15% Similarity=0.169 Sum_probs=166.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|++++.||+|+||+||+|+++ .++..+|+|++.+.........+.+. +|+.+|+.++||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~l~~ 68 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKV------DTHALYAMKTLRKKDVLNRNQVAHVK-------AERDILAEADNEWVVKLYY 68 (381)
T ss_pred CceEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhcCCCCeeeeEE
Confidence 5899999999999999998863 57889999999865433322222222 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ ++||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~--~~kL~D 144 (381)
T cd05626 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIKLTD 144 (381)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC--CEEEee
Confidence 99999999999999986 99999873 44578899999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccc---cCC------C---------------------------CCCceeeeecCCcccccccccccccccc
Q 000399 322 KPLVGFNSIADW---CTI------P---------------------------TSPMIGCCIEGCSSQGLYADLKLSQSMD 365 (1566)
Q Consensus 322 FGlA~~~~~~~~---~~~------~---------------------------~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 365 (1566)
||+++....... ... . ......+......||+.|+|||++.+..
T Consensus 145 FGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (381)
T cd05626 145 FGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG 224 (381)
T ss_pred CcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC
Confidence 999864321000 000 0 0000011123457999999999999888
Q ss_pred hhhccccccccccCCchhhhHHHhhccccc
Q 000399 366 WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 366 y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+..+|+|+.|+| .+..+.|+.+
T Consensus 225 ~~~~~DiwSlG~i-------l~elltG~~P 247 (381)
T cd05626 225 YTQLCDWWSVGVI-------LFEMLVGQPP 247 (381)
T ss_pred CCCccceeehhhH-------HHHHHhCCCC
Confidence 9999999999988 7777888764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-27 Score=276.41 Aligned_cols=147 Identities=18% Similarity=0.209 Sum_probs=126.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||++.+. .++..+|+|.+.... ......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHK------ETGLFAAAKIIQIES--EEELEDFM--------VEIDILSECKHPNIVGL 67 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEc------CCCcEEEEEEEeeCC--HHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 467999999999999999998753 467889999986532 22223344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+..+...|+||||+++ +|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .++|
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~--~~~l 144 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG--DVKL 144 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC--CEEE
Confidence 9999999999999999997 999988742 34588999999999999999999999999999999999999988 7999
Q ss_pred cCcCCCC
Q 000399 320 CDKPLVG 326 (1566)
Q Consensus 320 ~DFGlA~ 326 (1566)
+|||++.
T Consensus 145 ~d~g~~~ 151 (280)
T cd06611 145 ADFGVSA 151 (280)
T ss_pred ccCccch
Confidence 9999876
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-27 Score=277.43 Aligned_cols=149 Identities=20% Similarity=0.179 Sum_probs=123.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|.+. .++..||+|.+............+. +|+.+++.+. ||||+++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~lK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~~i~~~ 66 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDK------NTGKLVALKKTRLEMDEEGIPPTAL--------REISLLQMLSESIYIVRL 66 (295)
T ss_pred CCceEeeEecccCCeEEEEEEEC------CCCcEEEEEeehhhccccCCchHHH--------HHHHHHHHccCCCCccce
Confidence 36899999999999999998863 4688999998765432222222233 5999999995 6999999
Q ss_pred cccccccCc-----eeeeccCCccchhhhhccCc---ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc-
Q 000399 241 LGLLKTSGL-----ITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD- 311 (1566)
Q Consensus 241 ~~~~~~~~~-----l~LV~E~~~gsL~~~l~~~~---~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~- 311 (1566)
++++...+. .|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 67 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~ 146 (295)
T cd07837 67 LDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146 (295)
T ss_pred eeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC
Confidence 999987665 89999999999988886422 235788899999999999999999999999999999999998
Q ss_pred cchhhhhhcCcCCCC
Q 000399 312 SCWSWLYICDKPLVG 326 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~ 326 (1566)
++ .+||+|||+++
T Consensus 147 ~~--~~kl~dfg~~~ 159 (295)
T cd07837 147 KG--LLKIADLGLGR 159 (295)
T ss_pred CC--eEEEeecccce
Confidence 66 79999999876
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-27 Score=290.00 Aligned_cols=210 Identities=15% Similarity=0.182 Sum_probs=166.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|++. .++..||||++.+...........+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKK------DTGHIYAMKKLRKSEMLEKEQVAHVR-------AERDILAEADNPWVVKLY 67 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCcceE
Confidence 36999999999999999998863 46889999999865332222222222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~ 143 (364)
T cd05599 68 YSFQDENYLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIKLS 143 (364)
T ss_pred EEEEcCCeEEEEECCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEe
Confidence 999999999999999986 99999973 44689999999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCC-----C---------------CCCce-------eeeecCCcccccccccccccccchhhccccc
Q 000399 321 DKPLVGFNSIADWCTI-----P---------------TSPMI-------GCCIEGCSSQGLYADLKLSQSMDWHSQFNRW 373 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~-----~---------------~~~~~-------~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~W 373 (1566)
|||+++.......... . ..... .......+||+.|+|||++.+..++..+|+|
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 223 (364)
T cd05599 144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW 223 (364)
T ss_pred ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence 9999875432110000 0 00000 0011234699999999999998999999999
Q ss_pred cccccCCchhhhHHHhhccccc
Q 000399 374 WRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 374 s~G~isnfeyL~~ln~~agrs~ 395 (1566)
+.|++ .+..+.|+.+
T Consensus 224 SlG~i-------l~el~~G~~P 238 (364)
T cd05599 224 SLGVI-------MYEMLVGYPP 238 (364)
T ss_pred cchhH-------HHHhhcCCCC
Confidence 99988 7777788764
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-27 Score=276.71 Aligned_cols=149 Identities=15% Similarity=0.197 Sum_probs=125.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|++. .++..+|+|.+... .......++. +|+.+++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHR------PTGVTMAMKEIRLE-LDESKFNQII--------MELDILHKAVSPYIVDFY 65 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEc------CCCcEEEEEEeecc-cCHHHHHHHH--------HHHHHHHhcCCCcHHhhh
Confidence 36899999999999999998863 46889999988643 2222223444 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCc-ccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhh
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~-~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+.+...+.+|+||||+++ +|..++.... ...+++..++.++.|++.||.|||+ .||+||||||+||+++.++ .+|
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 143 (286)
T cd06622 66 GAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--QVK 143 (286)
T ss_pred hheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--CEE
Confidence 999999999999999997 9988887421 2357888999999999999999997 5999999999999999988 799
Q ss_pred hcCcCCCCc
Q 000399 319 ICDKPLVGF 327 (1566)
Q Consensus 319 L~DFGlA~~ 327 (1566)
|+|||+++.
T Consensus 144 l~dfg~~~~ 152 (286)
T cd06622 144 LCDFGVSGN 152 (286)
T ss_pred EeecCCccc
Confidence 999998863
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.8e-27 Score=270.34 Aligned_cols=136 Identities=21% Similarity=0.237 Sum_probs=117.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-----CC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-----HP 235 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-----Hp 235 (1566)
..+|.++++||.|-|++||+|.|. ...+.||+|+.+..+...+ +++.||.+|++++ |+
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDt------q~~r~VAlKVvKSAqhYtE-----------aAlDEIklL~~v~~~Dp~~~ 139 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDT------QNKRYVALKVVKSAQHYTE-----------AALDEIKLLQQVREGDPNDP 139 (590)
T ss_pred CceEEEEEeccccccceeEEEeec------cCCeEEEEEEEehhhHHHH-----------HHHHHHHHHHHHHhcCCCCC
Confidence 368999999999999999999973 6789999999875432222 4567999999884 33
Q ss_pred ---CcccccccccccC----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCc
Q 000399 236 ---NVAPVLGLLKTSG----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNV 307 (1566)
Q Consensus 236 ---NIV~l~~~~~~~~----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NI 307 (1566)
.||+|++.|...+ ++|||+|+++.+|..+|.++..+.++...++.|++||+.||.|||+ .||||-||||+||
T Consensus 140 ~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENv 219 (590)
T KOG1290|consen 140 GKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENV 219 (590)
T ss_pred CCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCccee
Confidence 6999999997653 8999999999999999998888889999999999999999999998 7999999999999
Q ss_pred cccccc
Q 000399 308 LLTDSC 313 (1566)
Q Consensus 308 Ll~~~~ 313 (1566)
|+..+.
T Consensus 220 Ll~~~e 225 (590)
T KOG1290|consen 220 LLCSTE 225 (590)
T ss_pred eeeccc
Confidence 998773
|
|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-28 Score=301.86 Aligned_cols=201 Identities=16% Similarity=0.145 Sum_probs=171.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+|..++++ .++.+||+|++.+....++....++. .|-.+|..-+.+.||++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k------~t~~VYAMK~lnK~eMlKr~~tA~F~-------EERDimv~~ns~Wiv~L 140 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHK------STEKVYAMKILNKWEMLKRAETACFR-------EERDIMVFGNSEWIVQL 140 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEee------ccccchhHHHhhHHHHhhchhHHHHH-------HHhHHHHcCCcHHHHHH
Confidence 458999999999999999998874 68999999999987666555545554 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+.+|+++.++|+||||++| +|..++.. ...+++..++||+..|+.||.-||+.|+|||||||+||||+..| ++||
T Consensus 141 hyAFQD~~~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--HikL 216 (1317)
T KOG0612|consen 141 HYAFQDERYLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--HIKL 216 (1317)
T ss_pred HHHhcCccceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--cEee
Confidence 9999999999999999997 99999984 33789999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc----c-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----S-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~----~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||.+-..... .. ..+...+|||-|.+||++. + ..|+..||+|+.|++ .++++-|.+
T Consensus 217 ADFGsClkm~~d--------G~--V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~-------~YEMlyG~T 279 (1317)
T KOG0612|consen 217 ADFGSCLKMDAD--------GT--VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVF-------MYEMLYGET 279 (1317)
T ss_pred ccchhHHhcCCC--------Cc--EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHH-------HHHHHcCCC
Confidence 999987644411 01 1234567999999999995 2 568899999999987 778888866
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 280 P 280 (1317)
T KOG0612|consen 280 P 280 (1317)
T ss_pred c
Confidence 3
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-27 Score=283.68 Aligned_cols=146 Identities=25% Similarity=0.298 Sum_probs=121.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|.+. .++..||+|.+..... ...+.+. +|+.+|+.++||||+++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~------~~~~~v~iK~i~~~~~--~~~~~~~--------~Ei~~l~~l~h~~i~~~ 67 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDS------DCDKRVAVKKIVLTDP--QSVKHAL--------REIKIIRRLDHDNIVKV 67 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEEC------CCCcEEEEEEEecCCC--chHHHHH--------HHHHHHHhcCCCcchhh
Confidence 468999999999999999998863 5788999999865432 2222333 59999999999999999
Q ss_pred ccccccc--------------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCC
Q 000399 241 LGLLKTS--------------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1566)
Q Consensus 241 ~~~~~~~--------------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~N 306 (1566)
++++... ...|+||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N 144 (342)
T cd07854 68 YEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 144 (342)
T ss_pred HhhhcccccccccccccccccceEEEEeecccccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 9887654 3579999999999988886 2357888999999999999999999999999999999
Q ss_pred ccccccchhhhhhcCcCCCC
Q 000399 307 VLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 307 ILl~~~~~~~vKL~DFGlA~ 326 (1566)
|+++.++. .+||+|||+++
T Consensus 145 ili~~~~~-~~kl~dfg~~~ 163 (342)
T cd07854 145 VFINTEDL-VLKIGDFGLAR 163 (342)
T ss_pred EEEcCCCc-eEEECCcccce
Confidence 99985442 68999999876
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-27 Score=290.97 Aligned_cols=209 Identities=15% Similarity=0.170 Sum_probs=164.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.+|+.++||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~------~~~~~~avK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~~ 68 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKV------DTNALYAMKTLRKADVLMRNQAAHVK-------AERDILAEADNEWVVKLYY 68 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEcHHHHHhhhhHHHHH-------HHHHHHHhCCCCCcceEEE
Confidence 6999999999999999998863 46889999998764332222222222 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+.+++.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~ikL~D 144 (376)
T cd05598 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 144 (376)
T ss_pred EEEcCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC--CEEEEe
Confidence 99999999999999986 99999973 45578889999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccc---cCC---------------C--C------------CCceeeeecCCcccccccccccccccchhhc
Q 000399 322 KPLVGFNSIADW---CTI---------------P--T------------SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQ 369 (1566)
Q Consensus 322 FGlA~~~~~~~~---~~~---------------~--~------------~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~ 369 (1566)
||+|+....... ... . . .....+......||+.|||||++.+..++..
T Consensus 145 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 224 (376)
T cd05598 145 FGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 224 (376)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcc
Confidence 999863211000 000 0 0 0000011234579999999999999999999
Q ss_pred cccccccccCCchhhhHHHhhccccc
Q 000399 370 FNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 370 ~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+|+.|++ .+..+.|+.+
T Consensus 225 ~DiwSlGvi-------lyell~G~~P 243 (376)
T cd05598 225 CDWWSVGVI-------LYEMLVGQPP 243 (376)
T ss_pred eeeeeccce-------eeehhhCCCC
Confidence 999999998 5556667653
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.4e-27 Score=283.02 Aligned_cols=150 Identities=22% Similarity=0.292 Sum_probs=124.9
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCc
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNI 237 (1566)
+...++|++++.||+|+||.||+|.+. .++..||+|.+.+..........+. +|+.+|+.++||||
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i 76 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDR------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMKHENV 76 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEEC------CCCcEEEEEEecccccchHHHHHHH--------HHHHHHHhcCCCCc
Confidence 345678999999999999999998753 5688999999865322222122233 59999999999999
Q ss_pred ccccccccccC------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 238 APVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 238 V~l~~~~~~~~------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
+++++++.... .+++||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 77 v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~ 153 (343)
T cd07880 77 IGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE 153 (343)
T ss_pred cceeeeecCCccccccceEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 99999987654 458999999779988886 235788899999999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCC
Q 000399 312 SCWSWLYICDKPLVG 326 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~ 326 (1566)
++ .+||+|||+++
T Consensus 154 ~~--~~kl~dfg~~~ 166 (343)
T cd07880 154 DC--ELKILDFGLAR 166 (343)
T ss_pred CC--CEEEeeccccc
Confidence 88 79999999876
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-27 Score=281.03 Aligned_cols=148 Identities=24% Similarity=0.320 Sum_probs=125.1
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.++||||++
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 78 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDT------KTGRKVAIKKLSRPFQSAIHAKRTY--------RELRLLKHMDHENVIG 78 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEEC------CCCcEEEEEecccccchhhHHHHHH--------HHHHHHHhccCCCHHH
Confidence 3568999999999999999998863 4678899998765322222222233 5999999999999999
Q ss_pred ccccccccCc------eeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTSGL------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~~~------l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++...+. +|+|+||++++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07851 79 LLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155 (343)
T ss_pred HHHHhhccccccccccEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 9998876654 899999998899999873 4578899999999999999999999999999999999999988
Q ss_pred hhhhhhcCcCCCC
Q 000399 314 WSWLYICDKPLVG 326 (1566)
Q Consensus 314 ~~~vKL~DFGlA~ 326 (1566)
.+||+|||++.
T Consensus 156 --~~kL~dfg~~~ 166 (343)
T cd07851 156 --ELKILDFGLAR 166 (343)
T ss_pred --CEEEccccccc
Confidence 79999999986
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-27 Score=281.43 Aligned_cols=194 Identities=17% Similarity=0.195 Sum_probs=164.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++++.||+|+||.||+|++. .++..||+|++.+...... ....+. +|+.+|..++||||++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~iv~~~ 67 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKK------DTGEIVALKRMKKSLLFKLNEVRHVL--------TERDILTTTKSEWLVKLL 67 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhCCCCCCccEE
Confidence 6999999999999999998863 4678999999986533221 222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kL~ 143 (333)
T cd05600 68 YAFQDDEYLYLAMEYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--HIKLT 143 (333)
T ss_pred EEEEcCCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEEE
Confidence 999999999999999987 99999973 44578899999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++.... ......||+.|+|||++.+..++...|+|+.|++ .+.++.|+.+
T Consensus 144 Dfg~a~~~~~--------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~ell~g~~p 197 (333)
T cd05600 144 DFGLSKGIVT--------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCM-------LYEFLCGFPP 197 (333)
T ss_pred eCcCCccccc--------------ccCCcccCccccChhHhcCCCCCCccceecchHH-------HhhhhhCCCC
Confidence 9999985442 1123358899999999998899999999999988 6677777664
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-27 Score=282.92 Aligned_cols=197 Identities=17% Similarity=0.156 Sum_probs=163.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc-cchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.++ ...+..+|+|.+.+........ ..+. +|+.+|+.++||||++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~Iv~ 95 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYK-----NEDFPPVAIKRFEKSKIIKQKQVDHVF--------SERKILNYINHPFCVN 95 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEE-----CCCCeEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhCCCCCCcc
Confidence 568999999999999999998742 1234689999987654322222 2222 6999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++.+.+.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 96 ~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~ik 171 (340)
T PTZ00426 96 LYGSFKDESYLYLVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FIK 171 (340)
T ss_pred eEEEEEeCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEE
Confidence 99999999999999999986 99999973 44578889999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++..... .....||+.|+|||++.+..++..+|+|+.|++ .+.+++|+.+
T Consensus 172 L~DFG~a~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-------l~ell~G~~P 227 (340)
T PTZ00426 172 MTDFGFAKVVDTR--------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIF-------IYEILVGCPP 227 (340)
T ss_pred EecCCCCeecCCC--------------cceecCChhhcCHHHHhCCCCCccccccchhhH-------HHHHhcCCCC
Confidence 9999999854310 012248899999999998888999999999988 7777788764
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.8e-27 Score=271.16 Aligned_cols=148 Identities=16% Similarity=0.183 Sum_probs=123.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+.|++.+.||+|+||.||+|.+. .++..+|+|++..... ...++. +|+.+++++ +||||++
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~a~K~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 77 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTED---EEEEIK--------LEINMLKKYSHHRNIAT 77 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEc------CCCcEEEEEEEecChH---HHHHHH--------HHHHHHHHhcCCCcEEE
Confidence 457999999999999999998863 5678899999765321 112222 478888888 6999999
Q ss_pred ccccccc------cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 240 VLGLLKT------SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 240 l~~~~~~------~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+++++.. ...+|+||||+++ +|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~ 157 (282)
T cd06636 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157 (282)
T ss_pred EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 9999853 4578999999987 99999975445557788889999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCc
Q 000399 313 CWSWLYICDKPLVGF 327 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~ 327 (1566)
+ .++|+|||+++.
T Consensus 158 ~--~~~l~dfg~~~~ 170 (282)
T cd06636 158 A--EVKLVDFGVSAQ 170 (282)
T ss_pred C--CEEEeeCcchhh
Confidence 8 799999998763
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-26 Score=259.24 Aligned_cols=223 Identities=21% Similarity=0.288 Sum_probs=201.0
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeeehhhhhcc-CcceeeeecCcceEEEeeccCCCcccce
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHH-GALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~gH~-~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
...|...|++ .|++|.| ++||+.||.|++|+..-+.++.+.+|. ..|++++|+|++..|+|+|. |++|
T Consensus 134 lQaHDs~Vr~m~ws~~g~w-----miSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~Sd----Dg~i 204 (464)
T KOG0284|consen 134 LQAHDSPVRTMKWSHNGTW-----MISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSD----DGTI 204 (464)
T ss_pred hhhhcccceeEEEccCCCE-----EEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecC----CCeE
Confidence 3459999998 7999999 999999999999999988888887776 99999999999999999998 9999
Q ss_pred eeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCC
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~ 1433 (1566)
+|||....+..+.+.||.-.|.|++|+|..+.|+|+ |..|++||.++|+|+.++..|
T Consensus 205 kiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~H--------------------- 263 (464)
T KOG0284|consen 205 KIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGH--------------------- 263 (464)
T ss_pred EEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhc---------------------
Confidence 999999998889999999999999999999999988 999999999999999988765
Q ss_pred CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCC
Q 000399 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1513 (1566)
Q Consensus 1434 ~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~ 1513 (1566)
...|..+.|+|+ +++|+|+|.|..++++|+++.+.+.++++| ...|+++.++|-.
T Consensus 264 ---------KntVl~~~f~~n----------~N~Llt~skD~~~kv~DiR~mkEl~~~r~H------kkdv~~~~WhP~~ 318 (464)
T KOG0284|consen 264 ---------KNTVLAVKFNPN----------GNWLLTGSKDQSCKVFDIRTMKELFTYRGH------KKDVTSLTWHPLN 318 (464)
T ss_pred ---------cceEEEEEEcCC----------CCeeEEccCCceEEEEehhHhHHHHHhhcc------hhhheeecccccc
Confidence 556888999987 899999999999999999999999999987 4557888888755
Q ss_pred cccCCCcccchhHHHhccCCCceeEEeeccCceeEEee-ccCceeeEeeeeccC
Q 000399 1514 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1514 ~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~-gH~~~V~~VafspdG 1566 (1566)
. .++++|+.||.|..|.+...+.+..+. +|++.|.+++|+|-|
T Consensus 319 ~----------~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlG 362 (464)
T KOG0284|consen 319 E----------SLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLG 362 (464)
T ss_pred c----------cceeeccCCCceEEEeccccccccCCCcccccceeeeeccccc
Confidence 3 489999999999999999777776664 899999999999965
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-26 Score=276.42 Aligned_cols=157 Identities=15% Similarity=0.223 Sum_probs=126.2
Q ss_pred hccccc-ceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc--ccchhhhc--CCCCCCCCCCCCcccCC
Q 000399 161 MTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRLI--GVPSFDESSVPGCLRHP 235 (1566)
Q Consensus 161 ~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~--~~~~l~~~--g~~~~rEi~iL~~l~Hp 235 (1566)
.++|.. .+.||+|+||+||+|.+. .++..+|+|.+......... ..+..... -....+|+.+++.++||
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 80 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDT------LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHE 80 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEEC------CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCc
Confidence 457765 577999999999999863 46889999998754322110 00000000 00123699999999999
Q ss_pred CcccccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 236 NVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 236 NIV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
||+++++++...+..|+||||++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 81 ~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~-- 156 (335)
T PTZ00024 81 NIMGLVDVYVEGDFINLVMDIMASDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG-- 156 (335)
T ss_pred ceeeeeEEEecCCcEEEEEeccccCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC--
Confidence 99999999999999999999999999999873 34578889999999999999999999999999999999999998
Q ss_pred hhhhcCcCCCCc
Q 000399 316 WLYICDKPLVGF 327 (1566)
Q Consensus 316 ~vKL~DFGlA~~ 327 (1566)
.+||+|||+++.
T Consensus 157 ~~kl~dfg~~~~ 168 (335)
T PTZ00024 157 ICKIADFGLARR 168 (335)
T ss_pred CEEECCccceee
Confidence 799999999874
|
|
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-27 Score=271.71 Aligned_cols=200 Identities=16% Similarity=0.124 Sum_probs=172.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|+.-+.||+|+||+||-|+- ..+|+.+|.|.+.+..+.....+.. ++.|-.+|.+++.|.||.+-
T Consensus 185 n~F~~~RvlGkGGFGEV~acqv------raTGKMYAcKkL~KKRiKkr~ge~m-------aLnEk~iL~kV~s~FiVsla 251 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQV------RATGKMYACKKLDKKRIKKRKGETM-------ALNEKQILEKVSSPFIVSLA 251 (591)
T ss_pred cceeeeEEEecccccceeEEEE------ecchhhHHHHHHHHHHHHHhhhhHH-------hhHHHHHHHHhccCcEEEEe
Confidence 3688899999999999997764 3689999999998765443322221 24699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
.+|++.+.+|+||..|.| +|.-.|....+..+++..+++|+.||+.||++||+.+||+|||||+|||+|+.| +++|+
T Consensus 252 YAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--hvRIS 329 (591)
T KOG0986|consen 252 YAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--HVRIS 329 (591)
T ss_pred eeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--CeEee
Confidence 999999999999999997 999999866666799999999999999999999999999999999999999999 89999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|+|........ ..+-+||..|||||++.+..|+...|+|+.||+ ++++++|+++
T Consensus 330 DLGLAvei~~g~~------------~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCl-------lYemi~G~sP 385 (591)
T KOG0986|consen 330 DLGLAVEIPEGKP------------IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCL-------LYEMIAGHSP 385 (591)
T ss_pred ccceEEecCCCCc------------cccccCcccccCHHHHcCCcccCCccHHHHHhH-------HHHHHcccCc
Confidence 9999987653111 122259999999999999999999999999988 8999999986
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=5e-27 Score=285.49 Aligned_cols=200 Identities=17% Similarity=0.211 Sum_probs=163.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+++++ .++..+|+|++.+.........+.+. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHK------SSQKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCEeeE
Confidence 468999999999999999998863 46889999998764333322222332 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+++.+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~--~~kL 183 (370)
T cd05621 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKL 183 (370)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEE
Confidence 9999999999999999986 99999963 3478889999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc----hhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+|+....... .......||+.|+|||++.+.. ++..+|+|+.|++ .+.+++|+.+
T Consensus 184 ~DFG~a~~~~~~~~----------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i-------lyell~G~~P 246 (370)
T cd05621 184 ADFGTCMKMDETGM----------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF-------LFEMLVGDTP 246 (370)
T ss_pred EecccceecccCCc----------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH-------HHHHHhCCCC
Confidence 99999986431100 0112345899999999987543 6789999999988 7777888764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-27 Score=283.31 Aligned_cols=210 Identities=15% Similarity=0.158 Sum_probs=165.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~iv~~~ 67 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKK------DTGHIYAMKILRKADMLEKEQVAHIR-------AERDILVEADGAWVVKMF 67 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 36899999999999999998863 56889999999764332222222222 588999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+.+.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~--~vkL~ 143 (360)
T cd05627 68 YSFQDKRNLYLIMEFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVKLS 143 (360)
T ss_pred EEEEcCCEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEe
Confidence 999999999999999997 99999973 45588999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCC----CCCC--------------------ceeeeecCCcccccccccccccccchhhcccccccc
Q 000399 321 DKPLVGFNSIADWCTI----PTSP--------------------MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~----~~~~--------------------~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G 376 (1566)
|||+++.......... .... .........+||+.|+|||++.+..++..+|+|+.|
T Consensus 144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 223 (360)
T cd05627 144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (360)
T ss_pred eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence 9999875432100000 0000 000011234689999999999999999999999999
Q ss_pred ccCCchhhhHHHhhccccc
Q 000399 377 ELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 377 ~isnfeyL~~ln~~agrs~ 395 (1566)
++ .+.++.|+.+
T Consensus 224 vi-------lyel~tG~~P 235 (360)
T cd05627 224 VI-------MYEMLIGYPP 235 (360)
T ss_pred ce-------eeecccCCCC
Confidence 98 5666677654
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-25 Score=252.79 Aligned_cols=277 Identities=18% Similarity=0.255 Sum_probs=218.9
Q ss_pred ccccccccccccccchHHHHHHhhccccCCCceeccCCCCCCCCCcccccccCccCCCCceEeeeeehhhhhccCcceee
Q 000399 1254 KNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSV 1333 (1566)
Q Consensus 1254 ~~~i~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~gH~~~V~sl 1333 (1566)
.++|....+.++|+..............|.+||-+..-.+.+ |+||++||++++||.++....++.||+++|.++
T Consensus 76 ~kgiSsE~~leIEYv~~~~aP~pl~~~~hdDWVSsv~~~~~~-----IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v 150 (423)
T KOG0313|consen 76 EKGISSEEILEIEYVEAITAPKPLQCFLHDDWVSSVKGASKW-----ILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSV 150 (423)
T ss_pred HcCcChhheeEEEEEEecCCCCccccccchhhhhhhcccCce-----EEEeecCCeeEEEecCCceEEEEecCCcceeee
Confidence 455566677777777666666666677899999876544666 999999999999999999999999999999999
Q ss_pred eecCc---ceEEEeeccCCCcccceeeEEecccc----cccccccccccccceEEeecCCceeec--cCcEEEeecC---
Q 000399 1334 AVGQD---ECTVFTAGIGPGFKGTVQKWELTRIN----CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ--- 1401 (1566)
Q Consensus 1334 afspd---~~~LaSgS~~~~~D~tVrlWDl~tg~----~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~--- 1401 (1566)
+|.-. .+.|+|||. |+++++|.++.++ ++..-.||++.|.+|+..++|.+++|+ |.+|+||+..
T Consensus 151 ~~v~~n~~~~~fvsas~----Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~ 226 (423)
T KOG0313|consen 151 AWVIKNSSSCLFVSASM----DQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDE 226 (423)
T ss_pred EEEecCCccceEEEecC----CceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCc
Confidence 99653 346999998 9999999998764 334446999999999999999999887 9999999932
Q ss_pred ----------------------CCcEEEEeeccccc----------ccccCCCCCcccccccCCCCCCCCcccccccccc
Q 000399 1402 ----------------------TGKLLSVFAEQSMD----------SLHGGSPSSSISKINTDQVGMLNSNTLSSGILST 1449 (1566)
Q Consensus 1402 ----------------------tg~~l~~l~~h~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv 1449 (1566)
++.++.++.+|... ++..++.+..++.|+....+.......+...+++
T Consensus 227 ~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i 306 (423)
T KOG0313|consen 227 EDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCI 306 (423)
T ss_pred cccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCcceeEe
Confidence 22345556666543 3344555666666666655554444445566666
Q ss_pred cccchhHHHhhhhhccceEEEEecCceEEEEEccCCc---eeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhH
Q 000399 1450 AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ---KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1526 (1566)
Q Consensus 1450 afsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~---~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~ 1526 (1566)
+++|. .++|++|+.|..||+||.|++. ..++|.+ |.++|.++.++|.+.+ .
T Consensus 307 ~~~~~----------~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~g------H~nwVssvkwsp~~~~----------~ 360 (423)
T KOG0313|consen 307 SYSPL----------SKLLASGSSDRHIRLWDPRTGDGSVVSQSLIG------HKNWVSSVKWSPTNEF----------Q 360 (423)
T ss_pred ecccc----------cceeeecCCCCceeecCCCCCCCceeEEeeec------chhhhhheecCCCCce----------E
Confidence 66665 8999999999999999999863 3344554 5789999999998875 7
Q ss_pred HHhccCCCceeEEeeccCc-eeEEeeccCceeeEeeeecc
Q 000399 1527 IAAGLSSGQCRLFDVRSGN-VIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1527 LaSGs~Dg~I~lWD~~sgk-~l~~l~gH~~~V~~Vafspd 1565 (1566)
+++||.|+++++||+|+-+ +++.+.+|+..|.++.|+..
T Consensus 361 ~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~ 400 (423)
T KOG0313|consen 361 LVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG 400 (423)
T ss_pred EEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC
Confidence 8999999999999999888 99999999999999999753
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-26 Score=266.45 Aligned_cols=148 Identities=17% Similarity=0.219 Sum_probs=124.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.++ .++..+++|++..... ...++. +|+.+++++ +||||++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHK------KTGQLVAIKIMDIIED---EEEEIK--------EEYNILRKYSNHPNIAT 67 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEEC------CCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHhcCCCChhe
Confidence 578999999999999999998863 4578899999875432 122333 588999998 6999999
Q ss_pred ccccccccC------ceeeeccCCcc-chhhhhccCc--ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 240 VLGLLKTSG------LITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 240 l~~~~~~~~------~l~LV~E~~~g-sL~~~l~~~~--~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
+++++.... .+|+||||+++ +|.+++.... ...+++..++.++.|++.||.|||++|++||||+|+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~ 147 (275)
T cd06608 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT 147 (275)
T ss_pred EEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc
Confidence 999997644 48999999997 9999887433 35678889999999999999999999999999999999999
Q ss_pred ccchhhhhhcCcCCCCc
Q 000399 311 DSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~ 327 (1566)
.++ .+||+|||++..
T Consensus 148 ~~~--~~~l~d~~~~~~ 162 (275)
T cd06608 148 KNA--EVKLVDFGVSAQ 162 (275)
T ss_pred cCC--eEEECCCcccee
Confidence 988 799999998863
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-26 Score=279.63 Aligned_cols=210 Identities=16% Similarity=0.166 Sum_probs=167.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|++. .++..||+|++.+.........+.+. +|+.+|..++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDK------DTGQVYAMKVLRKSDMIKRNQIAHVR-------AERDILADADSPWIVKLY 67 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEEC------CCCCEEEEEEEEHHHHhhccHHHHHH-------HHHHHHHhcCCCCccchh
Confidence 36999999999999999998863 46889999999865433322222222 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~--~~kL~ 143 (350)
T cd05573 68 YSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIKLA 143 (350)
T ss_pred hheecCCeEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEee
Confidence 999999999999999986 99999974 35688999999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccC------------------CCCCCceeeeecCCcccccccccccccccchhhccccccccccCCch
Q 000399 321 DKPLVGFNSIADWCT------------------IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~------------------~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfe 382 (1566)
|||+++......... ...............||+.|+|||++.+..++...|+|+.|++
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i---- 219 (350)
T cd05573 144 DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVI---- 219 (350)
T ss_pred cCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchh----
Confidence 999998644321000 0000000011234468999999999999999999999999988
Q ss_pred hhhHHHhhccccc
Q 000399 383 YLLFLNKLAGRRW 395 (1566)
Q Consensus 383 yL~~ln~~agrs~ 395 (1566)
.+..+.|+.+
T Consensus 220 ---l~ell~g~~P 229 (350)
T cd05573 220 ---LYEMLYGFPP 229 (350)
T ss_pred ---hhhhccCCCC
Confidence 6777778764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.92 E-value=8.1e-27 Score=273.05 Aligned_cols=197 Identities=15% Similarity=0.100 Sum_probs=163.4
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
|+..+.||+|+||+||+|.+. .++..+|+|.+.+....... ...++ +|+.+|+.++|+||+++++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~iv~~~~ 67 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKRILEKVNSRFVVSLAY 67 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEe------cCCceEEEEEeeHhhhhhhhhHHHHH--------HHHHHHHhcCCCcEEEEEE
Confidence 788999999999999998863 57899999998765432221 12233 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+++||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 68 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~--~~kl~D 145 (285)
T cd05631 68 AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG--HIRISD 145 (285)
T ss_pred EEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEee
Confidence 99999999999999996 998888644444578889999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++...... ......||..|+|||++.+..|+...|+|+.|++ .+..+.|+.+
T Consensus 146 fg~~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvi-------l~el~~g~~p 200 (285)
T cd05631 146 LGLAVQIPEGE------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCL-------IYEMIQGQSP 200 (285)
T ss_pred CCCcEEcCCCC------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHH-------HHHHHhCCCC
Confidence 99997543110 0122358899999999999899999999999987 6777788764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-26 Score=256.11 Aligned_cols=196 Identities=17% Similarity=0.222 Sum_probs=157.9
Q ss_pred hccccc-ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcc
Q 000399 161 MTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVA 238 (1566)
Q Consensus 161 ~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV 238 (1566)
.+-|++ .+.||+|+|+.|--|.. +.++..+|||++.+. ...... +.+||++++.+++ |+||+
T Consensus 76 ~d~YkLt~e~LGeGAyasVqtcv~------i~t~~EYAVKiidKq--~gHsR~--------RvfREVe~f~~Cqgh~nil 139 (463)
T KOG0607|consen 76 EDMYKLTSELLGEGAYASVQTCVS------IQTGKEYAVKIIDKQ--PGHSRS--------RVFREVETFYQCQGHKNIL 139 (463)
T ss_pred HHHHHhHHHHhcCccceeeeeeee------eccchhhhhhhhhcC--CchHHH--------HHHHHHHHHHHhcCCccHH
Confidence 344665 67899999999998775 578999999999875 333333 3347999999995 99999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 316 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~ 316 (1566)
+|+++|++++.+|||||.|.| .|...|. ++.-+++.++..++..|+.||++||.+||.||||||+|||-..... .-
T Consensus 140 qLiefFEdd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred HHHHHhcccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCc
Confidence 999999999999999999997 8888887 4667999999999999999999999999999999999999876553 46
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhcccccccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~i 378 (1566)
+|||||-++.-.......+...++.. .+-+|+..|||||+.. ...|++.+|.|+.|+|
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L----~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvI 280 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPEL----LTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVI 280 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccc----cCcccchhhcchhHHhhhccccccccccccHHHHHHH
Confidence 89999999875443222222233322 2345888999999863 4568999999999998
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-26 Score=253.71 Aligned_cols=203 Identities=18% Similarity=0.174 Sum_probs=176.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
..+|.+++.||+|+|++|.+++.+ .+.+++|+|+++++-....+...+.+ .|-.+.... +||.+|-
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~------~t~qiyamkvvkkel~nddedidwvq-------tek~vfe~asn~pflvg 315 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLK------KTDQIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNNPFLVG 315 (593)
T ss_pred cccceeeeeecCcchhhhhheehc------ccceeeehhhHHHHhcCCcccchhHH-------hhHHHHHhccCCCeEEe
Confidence 568999999999999999999874 67899999999987666665566665 566666555 6999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
|+.+|+++..+++|.||++| +|.-.++ ....+++.++++|..+|+.||.|||++|||+||||.+|+|++..| ++|
T Consensus 316 lhscfqtesrlffvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg--hik 391 (593)
T KOG0695|consen 316 LHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG--HIK 391 (593)
T ss_pred hhhhhcccceEEEEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC--cee
Confidence 99999999999999999997 8887777 344589999999999999999999999999999999999999999 899
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDY 398 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl 398 (1566)
|+|+|+++....... ...+++|||-|.|||++.+.+|+-.+|+|..|++ ++++.+||++.|+
T Consensus 392 ltdygmcke~l~~gd-----------~tstfcgtpnyiapeilrgeeygfsvdwwalgvl-------mfemmagrspfdi 453 (593)
T KOG0695|consen 392 LTDYGMCKEGLGPGD-----------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVL-------MFEMMAGRSPFDI 453 (593)
T ss_pred ecccchhhcCCCCCc-----------ccccccCCCcccchhhhcccccCceehHHHHHHH-------HHHHHcCCCCcce
Confidence 999999997553211 1234569999999999999999999999999987 8999999998764
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-26 Score=277.05 Aligned_cols=203 Identities=18% Similarity=0.212 Sum_probs=172.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
....|.+.+.||+|.|++|.++++. .++..||||++.+..........+. ||+++|+.++|||||+
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~------~t~~~VaiK~idkt~ln~~~~~k~~--------rev~imk~l~HPnIvk 119 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHI------LTGTEVAIKIIDKTQLNPSKRQKLG--------REVDIMKSLNHPNIVK 119 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEec------CCCceEEEEEehhcccChHHHHHHH--------HHHHHHHhcCCcceee
Confidence 3668999999999999999999974 5789999999998766655444433 7999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++.+.+++..+|+||||+.+ .+++++. +.+...+..++.++.|+++|++|||+++|+|||||++||||+.+. .+|
T Consensus 120 l~~v~~t~~~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~m--nik 195 (596)
T KOG0586|consen 120 LFSVIETEATLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENM--NIK 195 (596)
T ss_pred eeeeeeecceeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccc--cee
Confidence 99999999999999999986 9999998 455677899999999999999999999999999999999999999 599
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhh-ccccccccccCCchhhhHHHhhcccccCC
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGELSNFEYLLFLNKLAGRRWGD 397 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~-~~d~Ws~G~isnfeyL~~ln~~agrs~~d 397 (1566)
|+|||++..... .. ...+.+|++.|.|||++.+..|+. .+|.|+.|++ .+-...|.-+.|
T Consensus 196 IaDfgfS~~~~~--------~~----~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvv-------ly~LV~GsLPFD 256 (596)
T KOG0586|consen 196 IADFGFSTFFDY--------GL----MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVV-------LYALVEGSLPFD 256 (596)
T ss_pred eeccccceeecc--------cc----cccccCCCCCccChHhhcCcccCCcceehhhhhhh-------heeeeecccccC
Confidence 999999986552 11 123345999999999999999864 9999999998 444566665555
Q ss_pred cc
Q 000399 398 YT 399 (1566)
Q Consensus 398 l~ 399 (1566)
..
T Consensus 257 G~ 258 (596)
T KOG0586|consen 257 GQ 258 (596)
T ss_pred Cc
Confidence 43
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-27 Score=249.98 Aligned_cols=203 Identities=17% Similarity=0.176 Sum_probs=163.2
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
...+.|+.+.+||+|.||+||+|+.+ .+++.||+|++.-+.... =+|++++||+.+|..++|+|++
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~------n~~kkvalkkvlmeneKe--------GfpitalreikiL~~lkHenv~ 79 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSK------NTGKKVALKKVLMENEKE--------GFPITALREIKILQLLKHENVV 79 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhc------CccchhHHHHHHHhcccc--------CCcHHHHHHHHHHHHhcchhHH
Confidence 34568999999999999999999974 567778988765422111 1466788999999999999999
Q ss_pred ccccccccc--------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 239 PVLGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 239 ~l~~~~~~~--------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
.+++.|.+. ..+|+||.+|+.+|..+|.. +...++..+++.++.+++.||.|+|+..|+|||+||+|+||+
T Consensus 80 nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt 158 (376)
T KOG0669|consen 80 NLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT 158 (376)
T ss_pred HHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc
Confidence 999988643 25999999999999999974 445689999999999999999999999999999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHh
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
.++ .+||+|||+||........ ..++ -+.-+-|.+|++||.+. ..+|+..+|+|..||| .-.+
T Consensus 159 ~dg--ilklADFGlar~fs~~~n~---~kpr----ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCi-------maeM 222 (376)
T KOG0669|consen 159 KDG--ILKLADFGLARAFSTSKNV---VKPR----YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCI-------MAEM 222 (376)
T ss_pred CCc--eEEeeccccccceeccccc---CCCC----cccceeeeecCCHHHhhcccccCCcchhHhHHHH-------HHHH
Confidence 999 7999999999865432221 1121 11224688999999765 5679999999999998 5556
Q ss_pred hcc
Q 000399 390 LAG 392 (1566)
Q Consensus 390 ~ag 392 (1566)
+.+
T Consensus 223 wtr 225 (376)
T KOG0669|consen 223 WTR 225 (376)
T ss_pred Hcc
Confidence 554
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-25 Score=238.13 Aligned_cols=254 Identities=16% Similarity=0.246 Sum_probs=205.3
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
+....|.+.|++ |+-||++ .+++|.|++|++||+..+ +++++.||...|.+++.+.|+..|++|+. |+
T Consensus 11 ~~l~~~qgaV~avryN~dGnY-----~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~Gg----Dk 81 (307)
T KOG0316|consen 11 SILDCAQGAVRAVRYNVDGNY-----CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGG----DK 81 (307)
T ss_pred eeecccccceEEEEEccCCCE-----EEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCC----Cc
Confidence 445678899998 8999999 999999999999998765 89999999999999999999999999998 99
Q ss_pred ceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCC--cEEEEeeccccc---------ccccC
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG--KLLSVFAEQSMD---------SLHGG 1420 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg--~~l~~l~~h~~~---------~~~~~ 1420 (1566)
.|.+||+.||+.++.+.||.+.|+.|.|+.+...++|| |.++++||-++. ++++++....+. .+..+
T Consensus 82 ~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaG 161 (307)
T KOG0316|consen 82 AVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAG 161 (307)
T ss_pred eEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEee
Confidence 99999999999999999999999999999999999988 999999999864 577776554332 12233
Q ss_pred CCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCc
Q 000399 1421 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGF 1500 (1566)
Q Consensus 1421 ~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~ 1500 (1566)
+.++....++.+...+. ..-.+.+|+|+.|+++ |+..++++.|++||+.|-.+|+.+..+++|.+.-
T Consensus 162 S~DGtvRtydiR~G~l~-sDy~g~pit~vs~s~d----------~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~e-- 228 (307)
T KOG0316|consen 162 SVDGTVRTYDIRKGTLS-SDYFGHPITSVSFSKD----------GNCSLASSLDSTLRLLDKETGKLLKSYKGHKNME-- 228 (307)
T ss_pred ccCCcEEEEEeecceee-hhhcCCcceeEEecCC----------CCEEEEeeccceeeecccchhHHHHHhcccccce--
Confidence 33333333333332221 1224566777777765 9999999999999999999999999999995421
Q ss_pred hhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCce-eeEeeeecc
Q 000399 1501 PSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY-VTKVRIISK 1565 (1566)
Q Consensus 1501 ~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~-V~~Vafspd 1565 (1566)
.=..-|+ +.....+++||+||.|.+||+..+..+..+..|+.. |+.++++|.
T Consensus 229 --ykldc~l-----------~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~ 281 (307)
T KOG0316|consen 229 --YKLDCCL-----------NQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPT 281 (307)
T ss_pred --eeeeeee-----------cccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccC
Confidence 1111223 333457999999999999999999999999999988 899999984
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-26 Score=275.65 Aligned_cols=203 Identities=20% Similarity=0.214 Sum_probs=164.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|.....||+|+||.||+|. +.++..||||.+....... .++|.+ |+.+|.+++|||||+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~-------l~~~~~vAVK~~~~~~~~~--~~eF~~--------Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGV-------LSDGTVVAVKRLSSNSGQG--EREFLN--------EVEILSRLRHPNLVKL 136 (361)
T ss_pred HhCCchhcceecCCCeEEEEEE-------ECCCCEEEEEEecCCCCcc--hhHHHH--------HHHHHhcCCCcCcccE
Confidence 4589999999999999999766 4677999999876543221 455774 9999999999999999
Q ss_pred cccccccC-ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhc---cccCCCccCCCccccccchh
Q 000399 241 LGLLKTSG-LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL---GIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 241 ~~~~~~~~-~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~---gIiHrDLKp~NILl~~~~~~ 315 (1566)
+|||.+.+ ..+||+||+++ +|.+.|......+++-.....|+.++++||.|||.. .||||||||+|||||++.
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-- 214 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-- 214 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC--
Confidence 99999988 59999999995 999999854332554444566999999999999994 399999999999999998
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..||+|||+|+..... . ... .....||..|+|||.......+.+.|+|+.|++ .++.++||..
T Consensus 215 ~aKlsDFGLa~~~~~~-~-----~~~----~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVv-------llElitgr~~ 277 (361)
T KOG1187|consen 215 NAKLSDFGLAKLGPEG-D-----TSV----STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVV-------LLELITGRKA 277 (361)
T ss_pred CEEccCccCcccCCcc-c-----cce----eeecCCCCccCChhhhccCCcCcccccccchHH-------HHHHHhCCcc
Confidence 7999999999754420 0 000 000048888999999998888999999999988 7888999976
Q ss_pred CCcc
Q 000399 396 GDYT 399 (1566)
Q Consensus 396 ~dl~ 399 (1566)
-|..
T Consensus 278 ~d~~ 281 (361)
T KOG1187|consen 278 VDQS 281 (361)
T ss_pred cCCC
Confidence 5543
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6e-27 Score=274.25 Aligned_cols=185 Identities=16% Similarity=0.172 Sum_probs=156.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeec-ccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..|.-++.||.|+||.||-|++. .+..+||||.+... +...+...+++ .|+.+|++++|||+|.+
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~------~n~evVAIKKMsySGKQs~EKWqDIl--------KEVrFL~~l~HPntieY 91 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDIL--------KEVRFLRQLRHPNTIEY 91 (948)
T ss_pred HHHHHHHHhcCCccceeEEeecc------CccceeeeeeccccccccHHHHHHHH--------HHHHHHHhccCCCcccc
Confidence 35788999999999999999874 57899999998753 22233334445 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
-|+|..+...|||||||-|+-.|++.- ..+++-+-++..|..+.+.||.|||+.+.||||||..|||+++.| .|||+
T Consensus 92 kgCyLre~TaWLVMEYClGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g--~VKLa 168 (948)
T KOG0577|consen 92 KGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG--LVKLA 168 (948)
T ss_pred cceeeccchHHHHHHHHhccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC--eeeec
Confidence 999999999999999999977776653 245678888999999999999999999999999999999999999 89999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~i 378 (1566)
|||.|.... -..+++|||+|||||++. ...|+..+|+|+.|.-
T Consensus 169 DFGSAsi~~---------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGIT 214 (948)
T KOG0577|consen 169 DFGSASIMA---------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 214 (948)
T ss_pred cccchhhcC---------------chhcccCCccccchhHheeccccccCCccceeeccch
Confidence 999987533 134567999999999885 5569999999999953
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.5e-26 Score=271.29 Aligned_cols=199 Identities=19% Similarity=0.254 Sum_probs=161.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|++....... ....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~niv~~ 68 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSK------VNGKLVALKVIRLQEEEG-TPFTAI--------REASLLKGLKHANIVLL 68 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEEC------CCCCEEEEEEeccccccc-cchhHH--------HHHHHHhhCCCCCcCeE
Confidence 468999999999999999998863 468889999987542211 111222 69999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.+++..|+||||++++|.+++... .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 145 (303)
T cd07869 69 HDIIHTKETLTLVFEYVHTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG--ELKLA 145 (303)
T ss_pred EEEEecCCeEEEEEECCCcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 9999999999999999999998888743 34578888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......+++.|+|||++.+ ..++..+|+|+.|++ .+..+.|+.+
T Consensus 146 Dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i-------l~~l~~g~~p 203 (303)
T cd07869 146 DFGLARAKSVPSH-----------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCI-------FVEMIQGVAA 203 (303)
T ss_pred CCCcceeccCCCc-----------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 9999875331100 0112347889999998865 457888999999987 6667777643
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-26 Score=280.99 Aligned_cols=200 Identities=18% Similarity=0.207 Sum_probs=162.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.+++.++||||+++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHK------STRKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEC------CCCcEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhCCCCCCCeE
Confidence 468999999999999999998863 57889999998764332222222222 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+++.+|+||||+++ +|.++++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~--~ikL 183 (371)
T cd05622 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (371)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999986 99999873 3478888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc----hhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++....... . ......||+.|+|||++.+.. ++..+|+|+.|++ .+.++.|+.+
T Consensus 184 ~DfG~a~~~~~~~~------~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvi-------lyell~G~~P 246 (371)
T cd05622 184 ADFGTCMKMNKEGM------V----RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF-------LYEMLVGDTP 246 (371)
T ss_pred EeCCceeEcCcCCc------c----cccCcccCccccCHHHHhccCCCccCCCccceeehhHH-------HHHHHhCCCC
Confidence 99999985432100 0 012345899999999986543 7789999999988 6777788764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-26 Score=280.53 Aligned_cols=200 Identities=17% Similarity=0.188 Sum_probs=162.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.+|+.++||||+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~il~~~~h~~iv~~ 108 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHK------SSKQVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAHANSEWIVQL 108 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCcceE
Confidence 568999999999999999998863 56889999999764333222222222 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+.+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~~kL 183 (370)
T cd05596 109 HYAFQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (370)
T ss_pred EEEEecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999986 99999863 3478888999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc----chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM----DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~----~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++........ ......||+.|+|||++.+. .++..+|+|+.|++ .+..++|+.+
T Consensus 184 ~DfG~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvi-------lyelltG~~P 246 (370)
T cd05596 184 ADFGTCMKMDANGMV----------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF-------LYEMLVGDTP 246 (370)
T ss_pred EeccceeeccCCCcc----------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHH-------HHHHHhCCCC
Confidence 999999754311000 01223589999999998653 37789999999987 6777788764
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-26 Score=249.82 Aligned_cols=236 Identities=18% Similarity=0.275 Sum_probs=194.2
Q ss_pred CceeccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecc
Q 000399 1284 PWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1362 (1566)
Q Consensus 1284 ~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~t 1362 (1566)
.-|+|+..|... +++|..|++|+|||.++- ++..+.||+|+|.|+.+ |...++|||. |.||+|||+.+
T Consensus 198 kgVYClQYDD~k-----iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSS----DsTvrvWDv~t 266 (499)
T KOG0281|consen 198 KGVYCLQYDDEK-----IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSS----DSTVRVWDVNT 266 (499)
T ss_pred CceEEEEecchh-----hhcccccCceEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCC----CceEEEEeccC
Confidence 445555555444 999999999999999875 88999999999999998 4669999998 99999999999
Q ss_pred cccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcE---EEEeecccc---------cccccCCCCCcccc
Q 000399 1363 INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKL---LSVFAEQSM---------DSLHGGSPSSSISK 1428 (1566)
Q Consensus 1363 g~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~---l~~l~~h~~---------~~~~~~~~~~~~~~ 1428 (1566)
|+++.++-+|.+.|..+.|+. +++++| |.+|.+||+.+-.- .+++.+|.. ..+.+++++..++.
T Consensus 267 ge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikv 344 (499)
T KOG0281|consen 267 GEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKV 344 (499)
T ss_pred CchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEE
Confidence 999999999999999999854 677777 99999999975432 223334332 24566777778888
Q ss_pred cccCCCCCCC-CcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHh
Q 000399 1429 INTDQVGMLN-SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1566)
Q Consensus 1429 ~~~~~~~~~~-~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv 1507 (1566)
|+......+. +.+|..+|.|+.+. |+++++||+|.+||+||+..|.+++.++|| ...|++|
T Consensus 345 W~~st~efvRtl~gHkRGIAClQYr------------~rlvVSGSSDntIRlwdi~~G~cLRvLeGH------EeLvRci 406 (499)
T KOG0281|consen 345 WSTSTCEFVRTLNGHKRGIACLQYR------------DRLVVSGSSDNTIRLWDIECGACLRVLEGH------EELVRCI 406 (499)
T ss_pred Eeccceeeehhhhcccccceehhcc------------CeEEEecCCCceEEEEeccccHHHHHHhch------HHhhhhe
Confidence 8887776654 57889999998887 679999999999999999999999999987 7789999
Q ss_pred hccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc---------eeEEeeccCceeeEeeee
Q 000399 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN---------VIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1508 ~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk---------~l~~l~gH~~~V~~Vafs 1563 (1566)
.|+. +.|++|..||.|++||+.++. ++.++-.|++.|-.+.|.
T Consensus 407 RFd~-------------krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD 458 (499)
T KOG0281|consen 407 RFDN-------------KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD 458 (499)
T ss_pred eecC-------------ceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec
Confidence 9853 579999999999999998765 445556688888887774
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.2e-25 Score=241.18 Aligned_cols=219 Identities=17% Similarity=0.240 Sum_probs=178.4
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
+..|+..|.. .++||++ .+++|+|+++++||+.++ ..+.|.||...|.+++|++|+..++|||. |+||
T Consensus 59 ~~GHsH~v~dv~~s~dg~~-----alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSr----DkTi 129 (315)
T KOG0279|consen 59 LTGHSHFVSDVVLSSDGNF-----ALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSR----DKTI 129 (315)
T ss_pred eeccceEecceEEccCCce-----EEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCC----ccee
Confidence 3457777776 6999998 999999999999999986 77889999999999999999999999998 9999
Q ss_pred eeEEeccccccccccc--ccccccceEEeecC--Cceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccccc
Q 000399 1356 QKWELTRINCVSGYYG--HEEVVNDICVLSSS--GRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~g--H~~~V~sVafsp~g--~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~ 1429 (1566)
++|++- |.|..++.. |.+.|+|++|+|.. ..|+|+ |++||+||+++.+...++-+|
T Consensus 130 klwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh----------------- 191 (315)
T KOG0279|consen 130 KLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH----------------- 191 (315)
T ss_pred eeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccc-----------------
Confidence 999976 445555533 38899999999994 467777 999999999988888777664
Q ss_pred ccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhc
Q 000399 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1509 (1566)
Q Consensus 1430 ~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~ 1509 (1566)
++.++.++++|+ |..+++|+.||.+.+||++.++++..+. +...|.++||
T Consensus 192 -------------~~~v~t~~vSpD----------GslcasGgkdg~~~LwdL~~~k~lysl~-------a~~~v~sl~f 241 (315)
T KOG0279|consen 192 -------------SGYVNTVTVSPD----------GSLCASGGKDGEAMLWDLNEGKNLYSLE-------AFDIVNSLCF 241 (315)
T ss_pred -------------cccEEEEEECCC----------CCEEecCCCCceEEEEEccCCceeEecc-------CCCeEeeEEe
Confidence 455777777766 9999999999999999999999988775 3556788888
Q ss_pred cCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec----c-----CceeeEeeeeccC
Q 000399 1510 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA----H-----DGYVTKVRIISKR 1566 (1566)
Q Consensus 1510 s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g----H-----~~~V~~VafspdG 1566 (1566)
+|.. -||+.+... .|+|||+.++.++..++- - +-.-.+++|++||
T Consensus 242 spnr-----------ywL~~at~~-sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG 295 (315)
T KOG0279|consen 242 SPNR-----------YWLCAATAT-SIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADG 295 (315)
T ss_pred cCCc-----------eeEeeccCC-ceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCC
Confidence 7664 466555444 499999999999888752 1 1223578899887
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-26 Score=274.37 Aligned_cols=192 Identities=18% Similarity=0.196 Sum_probs=157.8
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+++++ .++..||+|++.+...... ....+. +|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05595 1 KLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTALKYAFQT 66 (323)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCcceeeEEec
Confidence 47999999999998863 5788999999886432222 222223 58999999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~ 142 (323)
T cd05595 67 HDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC--CEEecccHHh
Confidence 9999999999997 99888873 44678999999999999999999999999999999999999988 7999999998
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+...... .. .....||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-------l~ell~g~~P 194 (323)
T cd05595 143 KEGISDG-----AT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV-------MYEMMCGRLP 194 (323)
T ss_pred ccccCCC-----Cc------cccccCCcCcCCcccccCCCCCchhchhhhHHH-------HHHHHhCCCC
Confidence 7532100 00 112348899999999998889999999999988 6777778753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.9e-26 Score=256.24 Aligned_cols=213 Identities=16% Similarity=0.114 Sum_probs=176.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
..+|..+..||+|+||.|.+|..+ .+...+|||+++++-+...+..+.. +.|-++|... +-|.+++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerk------gtdELyAiKiLkKDViiQdDDvect-------m~EKrvLAL~~kppFL~q 414 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERK------GTDELYAIKILKKDVIIQDDDVECT-------MVEKRVLALPGKPPFLVQ 414 (683)
T ss_pred ecccceEEEeccCccceeeeeccc------CcchhhhhhhhccceeeecCcccce-------ehhhhheecCCCCchHHH
Confidence 458999999999999999998863 4678999999998866554433332 3588888777 4689999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++.+|++-+.+|+||||+.| +|.-.|+ .-+.+.+..+.+|+.+|+-||-+||++|||+||||.+|||++.+| ++|
T Consensus 415 lHScFQTmDRLyFVMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG--HiK 490 (683)
T KOG0696|consen 415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIK 490 (683)
T ss_pred HHHHhhhhhheeeEEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC--ceE
Confidence 99999999999999999997 9988887 456689999999999999999999999999999999999999999 899
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDY 398 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl 398 (1566)
|+|||+++.+... ..+ ..+++|||-|+|||++...+|+..+|+|+.|++ ++++++|.++.|-
T Consensus 491 i~DFGmcKEni~~-----~~T------TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVL-------LyEmlaGQpPFdG 552 (683)
T KOG0696|consen 491 IADFGMCKENIFD-----GVT------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL-------LYEMLAGQPPFDG 552 (683)
T ss_pred eeecccccccccC-----Ccc------eeeecCCCcccccceEEecccccchhHHHHHHH-------HHHHHcCCCCCCC
Confidence 9999999975521 111 123459999999999999999999999999987 8999999987553
Q ss_pred cc-eeecceeE
Q 000399 399 TF-HMVMPWVI 408 (1566)
Q Consensus 399 ~q-~pv~pwv~ 408 (1566)
.. ..+|.-|.
T Consensus 553 eDE~elF~aI~ 563 (683)
T KOG0696|consen 553 EDEDELFQAIM 563 (683)
T ss_pred CCHHHHHHHHH
Confidence 22 23444443
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-26 Score=280.69 Aligned_cols=191 Identities=14% Similarity=0.139 Sum_probs=160.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++++.||+|+||.||+|++. .++..||+|..... .+. +|+++|+.++|||||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~------~~~~~vaiK~~~~~--------~~~--------~E~~il~~l~HpnIv~~ 148 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDN------KTCEHVVIKAGQRG--------GTA--------TEAHILRAINHPSIIQL 148 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEEC------CCCCEEEEechhhh--------hhH--------HHHHHHHhCCCCCCCCE
Confidence 347999999999999999999873 57888999974321 122 69999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++|......++|||++.++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 149 ~~~~~~~~~~~lv~e~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~--~vkL~ 224 (391)
T PHA03212 149 KGTFTYNKFTCLILPRYKTDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG--DVCLG 224 (391)
T ss_pred eEEEEECCeeEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC--CEEEE
Confidence 999999999999999999999988863 34578888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+|+....... . ......||+.|+|||++.+..|+..+|+|+.|++ .+..+.|+.
T Consensus 225 DFG~a~~~~~~~~-----~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-------l~elltg~~ 281 (391)
T PHA03212 225 DFGAACFPVDINA-----N-----KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIV-------LFEMATCHD 281 (391)
T ss_pred eCCcccccccccc-----c-----ccccccCccCCCChhhhcCCCCCcHHHHHHHHHH-------HHHHHHCCC
Confidence 9999975331100 0 0123358999999999998899999999999988 677777764
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-26 Score=271.90 Aligned_cols=198 Identities=15% Similarity=0.140 Sum_probs=158.8
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
|++++.||+|+||.||+|.++ .++..||||++.+....... ...+.+ ..+++.+++.++||||+++++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~l~~-----e~~~~~~~~~l~hp~i~~~~~ 69 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYK------KTGELYAIKALKKGDIIARDEVESLMC-----EKRIFETANSERHPFLVNLFA 69 (324)
T ss_pred CeEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHHH-----HHHHHHhccccCCCChhceee
Confidence 678999999999999998763 56889999999865322222 122221 012344567788999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+|+||||+++ +|..++. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 70 ~~~~~~~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~--~~kL~D 144 (324)
T cd05589 70 CFQTEDHVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG--FVKIAD 144 (324)
T ss_pred EEEcCCEEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--cEEeCc
Confidence 99999999999999997 9988876 34578999999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... ......|++.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 fg~~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~G~~p 200 (324)
T cd05589 145 FGLCKEGMGFGD-----------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVL-------IYEMLVGESP 200 (324)
T ss_pred ccCCccCCCCCC-----------cccccccCccccCHhHhcCCCCCcccchhhHHHH-------HHHHHhCCCC
Confidence 999875332110 0122358899999999999889999999999988 6777778754
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.5e-26 Score=268.69 Aligned_cols=197 Identities=17% Similarity=0.100 Sum_probs=161.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+...+...||+|+||+||+|+. .-.||||+++......+..+.|.+ |+.++++-+|.||+-++
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~w---------hGdVAVK~Lnv~~pt~~qlqaFKn--------EVa~lkkTRH~NIlLFM 454 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRW---------HGDVAVKLLNVDDPTPEQLQAFKN--------EVAVLKKTRHENILLFM 454 (678)
T ss_pred HHhhccceeccccccceeeccc---------ccceEEEEEecCCCCHHHHHHHHH--------HHHHHhhcchhhheeee
Confidence 4677899999999999999985 355899999987777666666664 99999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
|++..+.. .||+-+|+| +|+.+|+-. +..|.....+.|++||++||.|||.++|||||||..||++.+++ .|||+
T Consensus 455 G~~~~p~~-AIiTqwCeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~--kVkIg 530 (678)
T KOG0193|consen 455 GACMNPPL-AIITQWCEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL--KVKIG 530 (678)
T ss_pred hhhcCCce-eeeehhccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC--cEEEe
Confidence 99988876 899999999 999999853 45578888899999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc---cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS---MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~---~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++..-....... +. ..-.|...|||||++.. .+|+.+.|+|+.|++ .++.++|--+
T Consensus 531 DFGLatvk~~w~g~~-q~--------~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV-------~YELltg~lP 592 (678)
T KOG0193|consen 531 DFGLATVKTRWSGEQ-QL--------EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIV-------WYELLTGELP 592 (678)
T ss_pred cccceeeeeeecccc-cc--------CCCccchhhhcHHHHhhcccCCCCcccchhhhhHH-------HHHHHhCcCC
Confidence 999997433211000 00 11126677999999863 458889999999988 7888888543
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-26 Score=272.02 Aligned_cols=207 Identities=18% Similarity=0.185 Sum_probs=157.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.+.- .....++..||+|++.... .......++ +|+.+|+.+ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFG-IDKKSSCNTVAVKMLKEGA-TASEHKALM--------SELKILIHIGNHLNVVN 75 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEec-cCCcccchhhheecccccc-chHHHHHHH--------HHHHHHHHhccCcceee
Confidence 3589999999999999999986411 1112456789999987532 222223344 599999999 8999999
Q ss_pred cccccccc-CceeeeccCCcc-chhhhhccCc------------------------------------------------
Q 000399 240 VLGLLKTS-GLITSVIPKTPY-TLENILQFSP------------------------------------------------ 269 (1566)
Q Consensus 240 l~~~~~~~-~~l~LV~E~~~g-sL~~~l~~~~------------------------------------------------ 269 (1566)
+++++... +.+++||||+++ +|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 99988764 468999999996 9999987421
Q ss_pred ------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCccccccccCCC
Q 000399 270 ------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337 (1566)
Q Consensus 270 ------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~ 337 (1566)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~~~~~~~-- 231 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV-- 231 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccccCcchh--
Confidence 12356677888999999999999999999999999999999988 79999999998543211000
Q ss_pred CCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 338 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 338 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
......++..|+|||++.+..++...|+|+.|++ .+..++ |+.+
T Consensus 232 -------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i-------l~el~~~g~~p 276 (338)
T cd05102 232 -------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVL-------LWEIFSLGASP 276 (338)
T ss_pred -------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHH-------HHHHHhCCCCC
Confidence 0112335678999999988889999999999987 566664 6543
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-26 Score=274.32 Aligned_cols=201 Identities=15% Similarity=0.113 Sum_probs=161.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||+||+++++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMK------NTGQVYAMKILNKWEMLKRAETACFR-------EERDVLVNGDRRWITNLH 67 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCCCceE
Confidence 36999999999999999998863 46889999999764332222222222 588899999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++.+|+||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 144 (331)
T cd05597 68 YAFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--HIRLA 144 (331)
T ss_pred EEEecCCeEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC--CEEEE
Confidence 999999999999999986 999999732 34578899999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-----cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... . ......||+.|+|||++.. ..++..+|+|+.|++ .+..+.|+.+
T Consensus 145 Dfg~~~~~~~~~~------~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~-------l~el~~g~~P 207 (331)
T cd05597 145 DFGSCLRLLADGT------V----QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVC-------MYEMLYGETP 207 (331)
T ss_pred ECCceeecCCCCC------c----cccceeccccccCHHHHhhccccccCCCCcceeehhhhH-------HHHHhhCCCC
Confidence 9999875432100 0 0112348999999999863 346778999999988 6667777754
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=236.10 Aligned_cols=224 Identities=18% Similarity=0.235 Sum_probs=194.5
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEee-eeehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~-~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
.+.-.|.+.|.+ +++|++. |+|+|.||.+.|||.-+ ++++.+.-....|..+||+|.|+++|+|+. |+
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr~-----ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGL----dN 119 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSRR-----IVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGL----DN 119 (343)
T ss_pred EEecccccceeeeEecCCcCe-----EEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCc----Cc
Confidence 345569999998 7999998 99999999999999664 588888888999999999999999999998 99
Q ss_pred ceeeEEeccc------ccccccccccccccceEEeecCCce-eeccCcEEEeecCCCcEEEEeecccccccccCCCCCcc
Q 000399 1354 TVQKWELTRI------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1426 (1566)
Q Consensus 1354 tVrlWDl~tg------~~i~tl~gH~~~V~sVafsp~g~~L-aSgDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~ 1426 (1566)
..-||++.+. +..+.+.||++.+.|+.|.+++..| .|||.++-+||+++|+.+..|.+|
T Consensus 120 ~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH-------------- 185 (343)
T KOG0286|consen 120 KCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGH-------------- 185 (343)
T ss_pred eeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCC--------------
Confidence 9999999754 4456789999999999998866665 577999999999999999998876
Q ss_pred cccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHH
Q 000399 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1566)
Q Consensus 1427 ~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~s 1506 (1566)
+.-|.+++++|. +++.+++|+-|++.++||+|.+.++.+|.+| ..-|++
T Consensus 186 ----------------~gDV~slsl~p~---------~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh------esDINs 234 (343)
T KOG0286|consen 186 ----------------TGDVMSLSLSPS---------DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH------ESDINS 234 (343)
T ss_pred ----------------cccEEEEecCCC---------CCCeEEecccccceeeeeccCcceeEeeccc------ccccce
Confidence 445788888884 4899999999999999999999999999988 445677
Q ss_pred hhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccC---ceeeEeeeeccC
Q 000399 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD---GYVTKVRIISKR 1566 (1566)
Q Consensus 1507 v~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~---~~V~~VafspdG 1566 (1566)
|+|. |+|.-++|||+|+++|+||+|..+.+..+. |+ .+|++|+||-.|
T Consensus 235 v~ff-----------P~G~afatGSDD~tcRlyDlRaD~~~a~ys-~~~~~~gitSv~FS~SG 285 (343)
T KOG0286|consen 235 VRFF-----------PSGDAFATGSDDATCRLYDLRADQELAVYS-HDSIICGITSVAFSKSG 285 (343)
T ss_pred EEEc-----------cCCCeeeecCCCceeEEEeecCCcEEeeec-cCcccCCceeEEEcccc
Confidence 7776 555689999999999999999999999987 43 478999998765
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-26 Score=272.37 Aligned_cols=200 Identities=15% Similarity=0.175 Sum_probs=162.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.+++.++||||+++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~~~~i~~~~~ 68 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREK------ATGDIYAMKVMKKSVLLAQETVSFFE-------EERDILSISNSPWIPQLQY 68 (330)
T ss_pred CceEEEEEEeccCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCcceee
Confidence 6899999999999999998863 57889999999875443333333333 6889999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+|+||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--~~kL~D 145 (330)
T cd05601 69 AFQDKDNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HIKLAD 145 (330)
T ss_pred EEecCCeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC--CEEecc
Confidence 99999999999999986 999999743 24588999999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCccccccccccccc------ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ------SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~------~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++........ ......||+.|+|||++. ...++..+|+|+.|++ .+..+.|+.+
T Consensus 146 fg~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i-------l~el~~g~~P 208 (330)
T cd05601 146 FGSAARLTANKMV----------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVI-------AYEMIYGRSP 208 (330)
T ss_pred CCCCeECCCCCce----------eeecccCCccccCHHHhccccccccCCCCCcceeecccce-------eeeeccCCCC
Confidence 9999854321000 111234889999999986 4557788999999988 5566677653
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-26 Score=273.57 Aligned_cols=201 Identities=15% Similarity=0.108 Sum_probs=161.5
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+++++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~l~ 67 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMK------HTERIYAMKILNKWEMLKRAETACFR-------EERNVLVNGDCQWITTLH 67 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHhhHHHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 36999999999999999998863 46788999998764322222222222 588889999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+.+..|+||||++| +|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--~~kl~ 144 (331)
T cd05624 68 YAFQDENYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--HIRLA 144 (331)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC--CEEEE
Confidence 999999999999999986 999999742 34578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-----cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... .......||+.|+|||++.+ ..++..+|+|+.|++ .+.++.|+.+
T Consensus 145 DfG~a~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvi-------l~ell~g~~P 207 (331)
T cd05624 145 DFGSCLKMNQDGT----------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC-------MYEMLYGETP 207 (331)
T ss_pred eccceeeccCCCc----------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehh-------hhhhhhCCCC
Confidence 9999975432100 00112348999999999875 457788999999988 6667778764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-26 Score=271.45 Aligned_cols=197 Identities=17% Similarity=0.136 Sum_probs=159.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCC-Ccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHP-NVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~Hp-NIV~l 240 (1566)
+|++++.||+|+||.||+|+++ .++..||+|++.+..... .....++ +|+.++..++|+ +|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVIIQDDDVECTM--------VEKRVLALPGKPPFLTQL 66 (324)
T ss_pred CceEEEEEeeccCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhcCCCCceeee
Confidence 5889999999999999998863 467889999998653322 2222233 588888888764 68889
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kL 142 (324)
T cd05587 67 HSCFQTMDRLYFVMEYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG--HIKI 142 (324)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC--CEEE
Confidence 9999999999999999986 99998873 44578889999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++..... ... .....||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~Dfg~~~~~~~~-----~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi-------l~elltG~~p 200 (324)
T cd05587 143 ADFGMCKENIFG-----GKT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL-------LYEMLAGQPP 200 (324)
T ss_pred eecCcceecCCC-----CCc------eeeecCCccccChhhhcCCCCCcccchhhhHHH-------HHHHHhCCCC
Confidence 999998743210 000 112248899999999999889999999999988 6677778765
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.8e-26 Score=265.36 Aligned_cols=199 Identities=17% Similarity=0.221 Sum_probs=161.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|+++ .++..+|+|++............+. +|+.+++.++||||+++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 67 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHK------ETKEIVAIKKFKDSEENEEVKETTL--------RELKMLRTLKQENIVELKE 67 (287)
T ss_pred CceEEEEecccCCEEEEEEEEC------CCCcEEEEEEEecccccccchhhHH--------HHHHHHHhCCCccccchhh
Confidence 6999999999999999998863 4688899999876533322222233 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++..++.+|+||||+++++.+.+... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 68 ~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~--~~kl~Df 144 (287)
T cd07848 68 AFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND--VLKLCDF 144 (287)
T ss_pred hEecCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEEeec
Confidence 99999999999999998555555422 34578888999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+++........ ......|++.|+|||++.+..++..+|+|+.|++ .+..++|+.+
T Consensus 145 g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvi-------l~el~~g~~p 200 (287)
T cd07848 145 GFARNLSEGSNA----------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCI-------LGELSDGQPL 200 (287)
T ss_pred cCcccccccccc----------cccccccccccCCcHHHcCCCCCCchhHHhHHHH-------HHHHHhCCCC
Confidence 999864321100 0112347889999999988889999999999987 6777778653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-26 Score=271.98 Aligned_cols=191 Identities=18% Similarity=0.204 Sum_probs=156.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+++++ .++..+|+|++.+...... ...++. +|+++++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~--------~e~~~l~~~~hp~i~~~~~~~~~ 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEK------ATGRYYAMKILKKEVIVAKDEVAHTL--------TENRVLQNSRHPFLTALKYSFQT 66 (325)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCCceEEEEEc
Confidence 46999999999998863 5788999999986533222 222233 58899999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--~~kL~Dfg~ 142 (325)
T cd05594 67 HDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGL 142 (325)
T ss_pred CCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--CEEEecCCC
Confidence 9999999999997 99888863 4457899999999999999999997 8999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
++...... .. .....||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.
T Consensus 143 ~~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~tG~~ 194 (325)
T cd05594 143 CKEGIKDG-----AT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV-------MYEMMCGRL 194 (325)
T ss_pred CeecCCCC-----cc------cccccCCcccCCHHHHccCCCCCccccccccce-------eeeeccCCC
Confidence 87533110 00 112348999999999998899999999999988 556666764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.9e-26 Score=265.73 Aligned_cols=198 Identities=19% Similarity=0.233 Sum_probs=156.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCC---cccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG---CLRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~---~l~HpNIV~ 239 (1566)
+|++++.||+|+||+||+|++. ...+..+|+|.+............+. +|+.+++ .++||||++
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~hpniv~ 68 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDL-----KNGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFEHPNVVR 68 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEc-----CCCCeEEEEEEEecccCCCCchHHHH--------HHHHHHHhhcccCCCCcce
Confidence 6999999999999999998752 13467899999875433222222222 3555554 457999999
Q ss_pred cccccc-----ccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 240 VLGLLK-----TSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 240 l~~~~~-----~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+++++. ....+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~- 147 (290)
T cd07862 69 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG- 147 (290)
T ss_pred EEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC-
Confidence 999875 34579999999999999999755555578889999999999999999999999999999999999998
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||+++..... .......||+.|+|||++.+..++..+|+|+.|++ .+..++|++
T Consensus 148 -~~kl~Dfg~~~~~~~~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~ 207 (290)
T cd07862 148 -QIKLADFGLARIYSFQ------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-------FAEMFRRKP 207 (290)
T ss_pred -CEEEccccceEeccCC------------cccccccccccccChHHHhCCCCCCccchHHHHHH-------HHHHHcCCC
Confidence 7999999999754311 01123358899999999988889999999999987 666667764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=232.92 Aligned_cols=237 Identities=16% Similarity=0.257 Sum_probs=191.0
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~ 1365 (1566)
..||++. ||.++. ..|++||+.++ .+.++.+|++.|++|.|..||..++|||. ||++||||+++-.|
T Consensus 48 iTpdk~~-----LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgse----Dgt~kIWdlR~~~~ 117 (311)
T KOG0315|consen 48 ITPDKKD-----LAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSE----DGTVKIWDLRSLSC 117 (311)
T ss_pred EcCCcch-----hhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCC----CceEEEEeccCccc
Confidence 5788876 888887 56999999875 78999999999999999999999999998 99999999999888
Q ss_pred ccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccc-----------c-ccccCCCCCccccccc
Q 000399 1366 VSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM-----------D-SLHGGSPSSSISKINT 1431 (1566)
Q Consensus 1366 i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~-----------~-~~~~~~~~~~~~~~~~ 1431 (1566)
.+.|. |.++|++|..+|....|+|| +|.|++||+.+..+...+..... . ....+-..++.+.|..
T Consensus 118 qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l 196 (311)
T KOG0315|consen 118 QRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRL 196 (311)
T ss_pred chhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEc
Confidence 88886 77999999999999999888 79999999998766555432211 1 2222233345555542
Q ss_pred CC-------CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhh
Q 000399 1432 DQ-------VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSL 1503 (1566)
Q Consensus 1432 ~~-------~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~ 1503 (1566)
.. .....+..|+..++.+.+||+ +++|+++|.|.+++||+..+. +.-.++++| ..+
T Consensus 197 ~~~~~~s~l~P~~k~~ah~~~il~C~lSPd----------~k~lat~ssdktv~iwn~~~~~kle~~l~gh------~rW 260 (311)
T KOG0315|consen 197 LNHQTASELEPVHKFQAHNGHILRCLLSPD----------VKYLATCSSDKTVKIWNTDDFFKLELVLTGH------QRW 260 (311)
T ss_pred cCCCccccceEhhheecccceEEEEEECCC----------CcEEEeecCCceEEEEecCCceeeEEEeecC------Cce
Confidence 21 223345678888999999887 999999999999999999987 555556665 445
Q ss_pred HHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeee
Q 000399 1504 VSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1504 V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafs 1563 (1566)
|... .||.||.+|+||++|+.+++||++.|+.++.++||-..-.|++.+
T Consensus 261 vWdc-----------~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 261 VWDC-----------AFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred EEee-----------eeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 5544 455777899999999999999999999999999999998888865
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.8e-26 Score=272.44 Aligned_cols=195 Identities=19% Similarity=0.208 Sum_probs=158.9
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|+++ .++..||+|++.+.........+.+. +|..++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~il~~~~~hp~Iv~~~~~~~~ 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELK------KTRRIYAMKVIKKELVNDDEDIDWVQ-------TEKHVFETASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhccCCCCCCceEEEEEc
Confidence 47999999999998863 56889999999875433322222222 588888888 69999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~ 143 (329)
T cd05588 68 ESRLFFVIEFVSGGDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEECcCccc
Confidence 9999999999997 99888863 45689999999999999999999999999999999999999988 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCC
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGD 397 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~d 397 (1566)
+...... . ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+.+
T Consensus 144 ~~~~~~~-----~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~-------l~el~~g~~Pf~ 197 (329)
T cd05588 144 KEGIRPG-----D------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL-------MFEMMAGRSPFD 197 (329)
T ss_pred cccccCC-----C------ccccccCCccccCHHHHcCCCCCCccceechHHH-------HHHHHHCCCCcc
Confidence 7432110 0 0112348899999999999899999999999988 677778876543
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.5e-26 Score=270.47 Aligned_cols=197 Identities=17% Similarity=0.138 Sum_probs=160.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
+|++.+.||+|+||.||+|+++ .++..+|+|++.+....... ...+. +|..++..+ +||+|+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALSGKPPFLTQL 66 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCeEeeE
Confidence 5889999999999999998863 46789999998865332221 11222 466777666 58999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kL 142 (323)
T cd05616 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred EEEEecCCEEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC--cEEE
Confidence 9999999999999999986 99988873 34578889999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++...... . ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~DfG~~~~~~~~~-----~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-------l~elltg~~P 200 (323)
T cd05616 143 ADFGMCKENMWDG-----V------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL-------LYEMLAGQAP 200 (323)
T ss_pred ccCCCceecCCCC-----C------ccccCCCChhhcCHHHhcCCCCCCccchhchhHH-------HHHHHhCCCC
Confidence 9999997533100 0 0112358999999999999999999999999988 6777788765
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.4e-26 Score=276.46 Aligned_cols=215 Identities=15% Similarity=0.105 Sum_probs=168.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeee-cccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIE-GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+-.+.++||+|+||+||+|+-+...+ .....||+|..+. ........+++++ |+++|++++|||||++|
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~--~~~~~VAvK~~k~~~~~~~~~~~e~m~--------EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNG--FKVVPVAVKTTKGSSELTKEQIKEFMK--------EARVMRQLNHPNVVRFY 227 (474)
T ss_pred CccccceeecccccEEEEEEEEecCC--ceeeeeEEEeecccccccHHHHHHHHH--------HHHHHHhCCCCCEEEEE
Confidence 45567999999999999988643111 0112289999875 2345566677775 99999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
|+...+..+|||||+|.| +|.++|+..+. .++..+...++++++.||+|||++++|||||..+|+|++.++ .+||+
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~--~vKIS 304 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG--VVKIS 304 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC--eEEeC
Confidence 999999999999999997 99999995433 478888899999999999999999999999999999999988 58999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc--ccccCCc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA--GRRWGDY 398 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a--grs~~dl 398 (1566)
|||+++........ ...+.-...|+|||.+....|+.++|+|+.|++ ..+.++ ..+|...
T Consensus 305 DFGLs~~~~~~~~~-----------~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~-------~~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMK-----------KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVL-------LWEIFENGAEPYPGM 366 (474)
T ss_pred ccccccCCcceeec-----------cccccCcceecChhhhccCccccccchhheeee-------EEeeeccCCCCCCCC
Confidence 99999864311000 011224456999999999999999999999987 444443 2355666
Q ss_pred cceeecceeE
Q 000399 399 TFHMVMPWVI 408 (1566)
Q Consensus 399 ~q~pv~pwv~ 408 (1566)
..+.+..||+
T Consensus 367 ~~~~v~~kI~ 376 (474)
T KOG0194|consen 367 KNYEVKAKIV 376 (474)
T ss_pred CHHHHHHHHH
Confidence 6666777774
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.3e-26 Score=270.88 Aligned_cols=202 Identities=16% Similarity=0.120 Sum_probs=160.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
+|++++.||+|+||.||++++. ....++..+|+|++.+...... ...+.. .+|+.+|+.+ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~~~~aiK~~~~~~~~~~~~~~~~~-------~~e~~~l~~l~~~~~i~~~ 70 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKV---TGHDTGKLYAMKVLQKAALVQKAKTVEHT-------RTERNVLEHVRQSPFLVTL 70 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEc---ccCCCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHHhccCCCCcccE
Confidence 4889999999999999987752 2235688999999876432211 111111 1588899999 59999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++..++.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~--~~kl 146 (332)
T cd05614 71 HYAFQTEAKLHLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVVL 146 (332)
T ss_pred EEEEecCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC--CEEE
Confidence 9999999999999999997 99999873 44578899999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++........ . .....||+.|+|||++.+. .++..+|+|+.|++ .+..++|+.+
T Consensus 147 ~DfG~~~~~~~~~~~------~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i-------l~elltg~~p 206 (332)
T cd05614 147 TDFGLSKEFLSEEKE------R----TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGIL-------IFELLTGASP 206 (332)
T ss_pred eeCcCCccccccCCC------c----cccccCCccccCHHHhcCCCCCCCccccccchhh-------hhhhhcCCCC
Confidence 999999854321100 0 1123489999999998765 47788999999988 6677778764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.6e-26 Score=273.14 Aligned_cols=198 Identities=18% Similarity=0.137 Sum_probs=163.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.+...+.||+|+||.||+++++ ++|..||||..++.. .......+. +|+++|++++|||||++++
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnk------etG~~vAvK~~~~~~-~~r~~e~~~--------~EieilkKLnh~NIVk~f~ 78 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNK------ETGRLVAVKTFNKES-SLRPRERWC--------REIEILKKLNHPNIVKLFD 78 (732)
T ss_pred ceeehhhhcCCccceeeeeccc------ccccchhHHhhhhhc-ccchHHHHH--------HHHHHHHHcCchhhhhhcc
Confidence 4667789999999999999974 799999999988753 333333344 6999999999999999999
Q ss_pred cccccC------ceeeeccCCcc-chhhhhccCcc-cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc-
Q 000399 243 LLKTSG------LITSVIPKTPY-TLENILQFSPN-ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC- 313 (1566)
Q Consensus 243 ~~~~~~------~l~LV~E~~~g-sL~~~l~~~~~-~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~- 313 (1566)
+-++.. .-.+|||||.| +|+.+|+...+ ..+++.+++.++..++.||.|||++||+||||||.||++-.+.
T Consensus 79 iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ged 158 (732)
T KOG4250|consen 79 IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGED 158 (732)
T ss_pred cCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCC
Confidence 876644 56789999997 99999985332 3589999999999999999999999999999999999986543
Q ss_pred -hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhc
Q 000399 314 -WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 314 -~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
...-||+|||.||...... ...+.+||+.|.+||+.. ...|+..+|.|+.|++ .+...+
T Consensus 159 gq~IyKLtDfG~Arel~d~s------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvt-------lY~caT 219 (732)
T KOG4250|consen 159 GQSIYKLTDFGAARELDDNS------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVT-------LYECAT 219 (732)
T ss_pred CceEEeeecccccccCCCCC------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhH-------HHHHhc
Confidence 3467999999999765311 234567999999999998 4889999999999987 777777
Q ss_pred ccc
Q 000399 392 GRR 394 (1566)
Q Consensus 392 grs 394 (1566)
|..
T Consensus 220 G~l 222 (732)
T KOG4250|consen 220 GEL 222 (732)
T ss_pred cCC
Confidence 754
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.1e-25 Score=273.35 Aligned_cols=195 Identities=16% Similarity=0.085 Sum_probs=160.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++++.||+|+||.||+|... ....+..+|+|.+..... .. +|+.+|+.++|||||++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~----~~~~~~~v~vK~~~~~~~-------~~--------~E~~il~~l~h~~iv~~ 151 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKH----GDEQRKKVIVKAVTGGKT-------PG--------REIDILKTISHRAIINL 151 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEc----CCccceeEEEEecccccc-------HH--------HHHHHHHhcCCCCccce
Confidence 347999999999999999987631 124567789998764311 11 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.....+|+|||++.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 152 ~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~--~~~l~ 227 (392)
T PHA03207 152 IHAYRWKSTVCMVMPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE--NAVLG 227 (392)
T ss_pred eeeEeeCCEEEEEehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEc
Confidence 99999999999999999999999885 345688999999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++....... .. ......||+.|+|||++.+..|+..+|+|+.|++ .+..+.|+.
T Consensus 228 DfG~a~~~~~~~~-----~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvi-------l~el~~g~~ 285 (392)
T PHA03207 228 DFGAACKLDAHPD-----TP----QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLV-------LFEMSVKNV 285 (392)
T ss_pred cCccccccCcccc-----cc----cccccccccCccCHhHhcCCCCCchhhHHHHHHH-------HHHHHHCCC
Confidence 9999975442111 00 1123458999999999998889999999999988 677777764
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.8e-26 Score=272.74 Aligned_cols=193 Identities=19% Similarity=0.206 Sum_probs=154.5
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||+||+|+++ .++..+|+|++.+..... ....+++. .+..+++.++||||+++++++.+
T Consensus 1 ~~lg~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~~-------e~~~~l~~~~h~~Iv~~~~~~~~ 67 (325)
T cd05602 1 KVIGKGSFGKVLLARHK------AEEKFYAVKVLQKKAILKKKEEKHIMS-------ERNVLLKNVKHPFLVGLHFSFQT 67 (325)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHHhhhHHHHHHH-------HHHHHHHhCCCCCCCceeEEEEc
Confidence 47999999999998863 467889999987643222 12222332 12334678899999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--~~kl~DfG~a 143 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGLC 143 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEEccCCCC
Confidence 9999999999997 99999873 44578889999999999999999999999999999999999988 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+...... .. .....||+.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 144 ~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~p 195 (325)
T cd05602 144 KENIEHN-----GT------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAV-------LYEMLYGLPP 195 (325)
T ss_pred cccccCC-----CC------cccccCCccccCHHHHcCCCCCCccccccccHH-------HHHHhcCCCC
Confidence 8533110 00 112348999999999999899999999999988 6667777654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-25 Score=256.21 Aligned_cols=234 Identities=14% Similarity=0.173 Sum_probs=190.9
Q ss_pred hccccCCCceec--cCC-CCCCCCCcccccccCccCCCCceEee--eeehhhhhccCcceeeeecCcceEEEeeccCCCc
Q 000399 1277 SNLMKCEPWFWF--PTP-AASWDGPDFLGRVGGLKDESPWKIKA--SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSp-dg~~~~~~~LaSgS~D~~I~vWdl~~--~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~ 1351 (1566)
.+...|+.-|.+ |.| .|.+ |++||.|+.|+||++-. ++++++.||..+|++++|+.+|..|.|+|-
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hL-----lLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf---- 278 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHL-----LLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASF---- 278 (503)
T ss_pred eeccCCccccchhhhccceeeE-----EEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeec----
Confidence 456678888887 566 7888 99999999999999875 499999999999999999999999999986
Q ss_pred ccceeeEEecccccccccccccccccceEEeecCC-ceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccc
Q 000399 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSG-RIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428 (1566)
Q Consensus 1352 D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~-~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~ 1428 (1566)
|++|++||++||+|+..+. -...++|+.|+|++. .+++| |+.|+.||+++|+.++.+..|
T Consensus 279 D~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~h---------------- 341 (503)
T KOG0282|consen 279 DRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRH---------------- 341 (503)
T ss_pred ceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhh----------------
Confidence 9999999999999998884 245679999999994 44455 999999999999988766543
Q ss_pred cccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhh
Q 000399 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1566)
Q Consensus 1429 ~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~ 1508 (1566)
-+.|+.+.|-++ |+.+++.+.|+++|+|+.+.+..+.....+. .....++.
T Consensus 342 --------------Lg~i~~i~F~~~----------g~rFissSDdks~riWe~~~~v~ik~i~~~~-----~hsmP~~~ 392 (503)
T KOG0282|consen 342 --------------LGAILDITFVDE----------GRRFISSSDDKSVRIWENRIPVPIKNIADPE-----MHTMPCLT 392 (503)
T ss_pred --------------hhheeeeEEccC----------CceEeeeccCccEEEEEcCCCccchhhcchh-----hccCccee
Confidence 456778888776 9999999999999999999876543332211 01112233
Q ss_pred ccCCCc------------------------------------ccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec
Q 000399 1509 ACGSEK------------------------------------MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1566)
Q Consensus 1509 ~s~~~~------------------------------------~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g 1552 (1566)
.+|.+. ...++|||||++|++|+.||.+.+||.++-+.+..+++
T Consensus 393 ~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka 472 (503)
T KOG0282|consen 393 LHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA 472 (503)
T ss_pred cCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc
Confidence 333221 12245999999999999999999999999999999999
Q ss_pred cCceeeEeeeecc
Q 000399 1553 HDGYVTKVRIISK 1565 (1566)
Q Consensus 1553 H~~~V~~Vafspd 1565 (1566)
|++++..+.|+|.
T Consensus 473 h~~~ci~v~wHP~ 485 (503)
T KOG0282|consen 473 HDQPCIGVDWHPV 485 (503)
T ss_pred CCcceEEEEecCC
Confidence 9999999999984
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-25 Score=269.74 Aligned_cols=193 Identities=20% Similarity=0.200 Sum_probs=156.7
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~~~~hp~iv~~~~~~~~ 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLK------KTERIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEhhHhcchhHHHHHH-------HHHHHHHhcCCCCcCCceeeEEEe
Confidence 47999999999998863 56889999999875333222222222 577777666 79999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--~~kL~DfG~~ 143 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--CEEEeeCCcc
Confidence 9999999999997 99888863 34578999999999999999999999999999999999999998 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+....... ......||+.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 144 ~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~P 195 (329)
T cd05618 144 KEGLRPGD-----------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL-------MFEMMAGRSP 195 (329)
T ss_pred ccccCCCC-----------ccccccCCccccCHHHHcCCCCCCccceecccHH-------HHHHhhCCCC
Confidence 75331100 0112348999999999999999999999999988 6777788764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=9.5e-26 Score=263.44 Aligned_cols=217 Identities=15% Similarity=0.143 Sum_probs=176.8
Q ss_pred ccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccc
Q 000399 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1566)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~ 244 (1566)
.-++-||.|+-|.||+|+- .+..||||+++.-+. .+|.-|++|+||||+.+.|+|
T Consensus 127 sELeWlGSGaQGAVF~Grl--------~netVAVKKV~elkE-----------------TdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRL--------HNETVAVKKVRELKE-----------------TDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hhhhhhccCcccceeeeec--------cCceehhHHHhhhhh-----------------hhHHHHHhccCcceeeEeeee
Confidence 3467799999999999884 578899999764221 377789999999999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
.....+|||||||.. -|.++|+ .+..++......|..+|+.||.|||.+.|||||||.-||||+.+. .|||+|||
T Consensus 182 tqsPcyCIiMEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d--~VKIsDFG 257 (904)
T KOG4721|consen 182 TQSPCYCIIMEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD--VVKISDFG 257 (904)
T ss_pred cCCceeEEeeeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc--eEEecccc
Confidence 999999999999995 9999998 345577777888999999999999999999999999999999998 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc-cCCcccee
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTFHM 402 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs-~~dl~q~p 402 (1566)
.++..... .+ ...+.||..|||||++...+-.+++|+|+.|++ +.++++|.. |.|..+..
T Consensus 258 TS~e~~~~------ST------kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVV-------LWEmLT~EiPYkdVdssA 318 (904)
T KOG4721|consen 258 TSKELSDK------ST------KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVV-------LWEMLTGEIPYKDVDSSA 318 (904)
T ss_pred chHhhhhh------hh------hhhhhhhHhhhCHHHhhcCCcccccceehhHHH-------HHHHHhcCCCccccchhe
Confidence 99865521 11 234569999999999999999999999999998 777888865 57776665
Q ss_pred ecceeE-eeccC--CCCCCCccccccccccc
Q 000399 403 VMPWVI-DFSTK--PDENFDSGSRDLSKSKW 430 (1566)
Q Consensus 403 v~pwv~-d~~~~--~~~~~~~~~rdLskp~~ 430 (1566)
|+ |-+ ...-. ....+|..|+-|.|--|
T Consensus 319 II-wGVGsNsL~LpvPstcP~GfklL~Kqcw 348 (904)
T KOG4721|consen 319 II-WGVGSNSLHLPVPSTCPDGFKLLLKQCW 348 (904)
T ss_pred eE-EeccCCcccccCcccCchHHHHHHHHHH
Confidence 55 544 22222 24567888888776544
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-25 Score=267.79 Aligned_cols=192 Identities=17% Similarity=0.163 Sum_probs=154.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCc-ccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~-l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|++. .++..||+|++.+...... .....+ +|..++.. .+||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~i~~~~~~~~ 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELK------GTNEFFAIKALKKDVVLEDDDVECTM--------VERRVLALAWEHPFLTHLFCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999998863 5678899999986532221 122222 35555554 47999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
..+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~ 142 (316)
T cd05592 67 TKEHLFFVMEYLNGGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--HIKIADFGM 142 (316)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--CEEEccCcC
Confidence 99999999999986 99998873 34578999999999999999999999999999999999999988 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++....... ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 a~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~ell~G~~P 195 (316)
T cd05592 143 CKENMNGEG-----------KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVL-------LYEMLIGQSP 195 (316)
T ss_pred CeECCCCCC-----------ccccccCCccccCHHHHcCCCCCCcccchhHHHH-------HHHHHhCCCC
Confidence 985432100 1112348999999999998889999999999988 6677778754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-26 Score=270.48 Aligned_cols=201 Identities=14% Similarity=0.086 Sum_probs=161.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+++++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLK------NADKVFAMKILNKWEMLKRAETACFR-------EERDVLVNGDNQWITTLH 67 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHHhhHHHHHH-------HHHHHHhhCCCCCEeeEE
Confidence 36999999999999999988753 46788999998764332222222222 588889999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+.+.+|+||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--~~kL~ 144 (332)
T cd05623 68 YAFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLA 144 (332)
T ss_pred EEEecCCEEEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEe
Confidence 999999999999999986 999999742 34578888999999999999999999999999999999999888 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... . ......||+.|+|||++. ...++..+|+|+.|++ .+..+.|+.+
T Consensus 145 DfG~a~~~~~~~~------~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvi-------l~ell~g~~P 207 (332)
T cd05623 145 DFGSCLKLMEDGT------V----QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVC-------MYEMLYGETP 207 (332)
T ss_pred ecchheecccCCc------c----eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHH-------HHHHhcCCCC
Confidence 9999875331100 0 112235899999999986 3457789999999987 6777778764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-25 Score=267.75 Aligned_cols=192 Identities=20% Similarity=0.209 Sum_probs=154.8
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCC-CCCCcccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi-~iL~~l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|++. .++..+|+|++.+..... ....+++ +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRK------SDGSFYAVKVLQKKTILKKKEQNHIM--------AERNVLLKNLKHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH--------HHHHHHHHhCCCCCccceeeEEE
Confidence 47999999999999863 568899999987653322 1222233 244 3578889999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+..|+||||+++ +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~ 142 (321)
T cd05603 67 TAEKLYFVLDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (321)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999997 9988886 345578899999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++...... . ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~~~~~~~~-----~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~p 195 (321)
T cd05603 143 CKEGVEPE-----E------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAV-------LYEMLYGLPP 195 (321)
T ss_pred CccCCCCC-----C------ccccccCCcccCCHHHhcCCCCCCcCcccccchh-------hhhhhcCCCC
Confidence 87532110 0 0112348899999999998889999999999988 6667777653
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-24 Score=243.50 Aligned_cols=254 Identities=15% Similarity=0.223 Sum_probs=194.0
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee----eehhhhhccCcceeeeecCcceEEEeeccCCCc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~----~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~ 1351 (1566)
....|++.||+ ||++|++ |||+|.|.++.+|++... ..+++.||..+|..+.||||++++++++.
T Consensus 219 il~~htdEVWfl~FS~nGky-----LAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~---- 289 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKY-----LASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGF---- 289 (519)
T ss_pred hHhhCCCcEEEEEEcCCCee-----EeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCc----
Confidence 45569999998 9999999 999999999999997642 57889999999999999999999999997
Q ss_pred ccceeeEEecccccccccc-cccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccc--cCCCC---
Q 000399 1352 KGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH--GGSPS--- 1423 (1566)
Q Consensus 1352 D~tVrlWDl~tg~~i~tl~-gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~--~~~~~--- 1423 (1566)
|..+++||+.+|.+...|. +|...+.+++|.|+|..+++| |++|..||+. |..+...++.....+. ....+
T Consensus 290 ~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~ 368 (519)
T KOG0293|consen 290 DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKY 368 (519)
T ss_pred hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcE
Confidence 8899999999999988884 567899999999999999887 9999999986 3222222221111000 00111
Q ss_pred -------CcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCc
Q 000399 1424 -------SSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496 (1566)
Q Consensus 1424 -------~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~ 1496 (1566)
..+.+++.+...-........+|.+...+.+ |+++++.=.+..|++||+...+.++.+.||..
T Consensus 369 vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d----------~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq 438 (519)
T KOG0293|consen 369 VLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKD----------GKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ 438 (519)
T ss_pred EEEEecccceeeechhhhhhhccccccCceeEEEEcCC----------CcEEEEEcccCeeEEeecchhhHHHHhhcccc
Confidence 1111111111111112233455666666654 99999999999999999999999999999853
Q ss_pred ccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1497 ~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
...+-.-||.+. +.++|||||+|+.|+||+..+|+++.++.||...|++|+|+|.
T Consensus 439 ----~~fiIrSCFgg~----------~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~ 493 (519)
T KOG0293|consen 439 ----GHFIIRSCFGGG----------NDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPA 493 (519)
T ss_pred ----cceEEEeccCCC----------CcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCC
Confidence 234444455433 3368999999999999999999999999999999999999994
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-25 Score=267.89 Aligned_cols=196 Identities=18% Similarity=0.175 Sum_probs=158.6
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
++.||+|+||.||++++.. ...++..+|+|++.+..........+. +|+++|++++||||+++++++.+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKIT---GPDAGQLYAMKVLKKATLKVRDRVRTK--------MERDILAEVNHPFIVKLHYAFQT 69 (318)
T ss_pred CceeeeCCCEEEEEEEEec---cCCCCCEEEEEEEEHHHhhhhhHHHHH--------HHHHHHHhCCCCCcccEEEEEEc
Confidence 3689999999999876421 124688999999986543322222232 58999999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
++.+|+||||+++ +|.+++. +...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 70 ~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~ 145 (318)
T cd05582 70 EGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLS 145 (318)
T ss_pred CCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC--cEEEeeccCC
Confidence 9999999999986 9999986 344578999999999999999999999999999999999999998 7999999998
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+...... . ......|++.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 146 ~~~~~~~------~-----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~tg~~p 197 (318)
T cd05582 146 KESIDHE------K-----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVL-------MFEMLTGSLP 197 (318)
T ss_pred cccCCCC------C-----ceecccCChhhcCHHHHcCCCCCCccceeccceE-------eeeeccCCCC
Confidence 8543210 0 0112358899999999998888899999999988 5666677654
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.90 E-value=1e-25 Score=268.48 Aligned_cols=192 Identities=15% Similarity=0.163 Sum_probs=155.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcc-cCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|+++ .++..+|+|++.+...... ....+. .|..++..+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~hp~i~~~~~~~~ 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELK------GTDEVYAIKVLKKDVILQDDDVDCTM--------TEKRILALAAKHPFLTALHCCFQ 66 (321)
T ss_pred CccccCCCeEEEEEEEC------CCCCEEEEEEEeHHHhhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 46999999999998863 4678999999886533222 122222 477777755 7999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--~~kL~Dfg~ 142 (321)
T cd05591 67 TKDRLFFVMEYVNGGDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--HCKLADFGM 142 (321)
T ss_pred cCCeEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeeccc
Confidence 99999999999997 99988873 44578889999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++...... .. .....||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~el~tg~~P 195 (321)
T cd05591 143 CKEGILNG-----VT------TTTFCGTPDYIAPEILQELEYGPSVDWWALGVL-------MYEMMAGQPP 195 (321)
T ss_pred ceecccCC-----cc------ccccccCccccCHHHHcCCCCCCccceechhHH-------HHHHhcCCCC
Confidence 87533110 00 112348899999999998899999999999988 6777778764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.3e-25 Score=267.89 Aligned_cols=197 Identities=15% Similarity=0.130 Sum_probs=159.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCccc-CCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l 240 (1566)
+|+..+.||+|+||.||+|+++ .++..||+|++.+...... ....+. +|..+++.+. ||+|+++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALQDKPPFLTQL 66 (323)
T ss_pred CceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCchhhe
Confidence 4788899999999999998863 5788999999886533222 122233 4777887775 5788899
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~--~ikL 142 (323)
T cd05615 67 HSCFQTVDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred eeEEecCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEE
Confidence 9999999999999999986 9999987 345588999999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++...... . ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~Dfg~~~~~~~~~-----~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi-------l~elltG~~p 200 (323)
T cd05615 143 ADFGMCKEHMVDG-----V------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL-------LYEMLAGQPP 200 (323)
T ss_pred eccccccccCCCC-----c------cccCccCCccccCHHHHcCCCCCCccchhhhHHH-------HHHHHhCCCC
Confidence 9999998533110 0 0112348899999999998889999999999987 6677778764
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-25 Score=267.26 Aligned_cols=191 Identities=20% Similarity=0.209 Sum_probs=154.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCC-CCCcccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~-iL~~l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||+||+|+++ .++..||+|++.+..... ....+++ +|.. +++.++||||+++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~~~~~l~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHK------ADGKFYAVKVLQKKAILKKKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhhCCCCCCCCeeEEEE
Confidence 47999999999998863 578999999987643322 1222233 2433 467889999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
..+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--~~kl~Dfg~ 142 (323)
T cd05575 67 TADKLYFVLDYVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (323)
T ss_pred eCCEEEEEEcCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeccCC
Confidence 99999999999997 99998873 44678889999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
++....... ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.
T Consensus 143 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~ell~g~~ 194 (323)
T cd05575 143 CKEGIEHSK-----------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAV-------LYEMLYGLP 194 (323)
T ss_pred CcccccCCC-----------ccccccCChhhcChhhhcCCCCCccccccccchh-------hhhhhcCCC
Confidence 975331100 0112348999999999999899999999999988 666667764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-25 Score=267.95 Aligned_cols=191 Identities=19% Similarity=0.203 Sum_probs=154.2
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCC-CCCcccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~-iL~~l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||+||+|+++ .++..+|+|++.+..... ....+++ +|.. +++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRK------LDGKCYAVKVLQKKIVLNRKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHHhCCCCCCccEEEEEe
Confidence 46999999999998863 578899999987643222 2222333 2443 467789999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
..+.+|+||||+++ +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--~~kL~DfG~ 142 (325)
T cd05604 67 TTEKLYFVLDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGL 142 (325)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEeecCC
Confidence 99999999999997 9988886 345688999999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
++....... ......||+.|+|||++.+..++..+|+|+.|++ .+.++.|+.
T Consensus 143 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~el~~G~~ 194 (325)
T cd05604 143 CKEGIAQSD-----------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAV-------LYEMLYGLP 194 (325)
T ss_pred cccCCCCCC-----------CcccccCChhhCCHHHHcCCCCCCcCccccccce-------ehhhhcCCC
Confidence 875321100 0112348999999999999899999999999988 566667765
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-25 Score=270.36 Aligned_cols=196 Identities=19% Similarity=0.255 Sum_probs=160.6
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|.+. .++..+|+|++...........+++ +|+.+++.++||||++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 84 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDT------VLGINVAVKKLSRPFQNQTHAKRAY--------RELVLLKCVNHKNIIS 84 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEc------CCCceeEEEEecccccchhHHHHHH--------HHHHHHHhCCCCCEee
Confidence 4678999999999999999998863 5688999999875433333333333 5999999999999999
Q ss_pred ccccccccC------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~~------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++...+ .+|+||||++++|.+.+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~ 160 (359)
T cd07876 85 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160 (359)
T ss_pred eeeeeccCCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence 999986543 5799999999988887752 367788899999999999999999999999999999999998
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||+++...... ......||+.|+|||++.+..++..+|+|+.|++ .+.++.|+
T Consensus 161 --~~kl~Dfg~a~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i-------l~el~tg~ 219 (359)
T cd07876 161 --TLKILDFGLARTACTNF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGELVKGS 219 (359)
T ss_pred --CEEEecCCCccccccCc------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHH-------HHHHHhCC
Confidence 79999999998533110 0112347889999999999899999999999987 67777776
Q ss_pred c
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 220 ~ 220 (359)
T cd07876 220 V 220 (359)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-24 Score=266.41 Aligned_cols=244 Identities=18% Similarity=0.275 Sum_probs=203.2
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEe-cccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL-TRIN 1364 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl-~tg~ 1364 (1566)
||++|.+ +++++.|+.+++|+..+. .++.+.+|...|++++|+||+.++++|+. |++|+|||+ ..+.
T Consensus 167 fs~~g~~-----l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiriwd~~~~~~ 237 (456)
T KOG0266|consen 167 FSPDGRA-----LAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRIWDLKDDGR 237 (456)
T ss_pred EcCCCCe-----EEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC----CceEEEeeccCCCe
Confidence 8999998 999999999999999654 46777899999999999999999999998 999999999 5669
Q ss_pred cccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccc-----------cCCCCCccccccc
Q 000399 1365 CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH-----------GGSPSSSISKINT 1431 (1566)
Q Consensus 1365 ~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~-----------~~~~~~~~~~~~~ 1431 (1566)
++++++||...|++++|+|.++.++|| |++|+|||+++|+++..+.+|+..+.. +++.++.+.+|+.
T Consensus 238 ~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~ 317 (456)
T KOG0266|consen 238 NLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDL 317 (456)
T ss_pred EEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEEC
Confidence 999999999999999999999888887 999999999999999999998765332 3344555666666
Q ss_pred CCCCC---CCCccccc--ccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHH
Q 000399 1432 DQVGM---LNSNTLSS--GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1566)
Q Consensus 1432 ~~~~~---~~~~~~~~--~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~s 1506 (1566)
..... ..+..+.. .+.++.|+|+ |+++++++.|+++++||++.+.++..+.+|... +.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~fsp~----------~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~------~~~ 381 (456)
T KOG0266|consen 318 ETGSKLCLKLLSGAENSAPVTSVQFSPN----------GKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL------VRC 381 (456)
T ss_pred CCCceeeeecccCCCCCCceeEEEECCC----------CcEEEEecCCCeEEEEEccCCcceeeecccCCc------cee
Confidence 55551 22233322 4677777766 999999999999999999999999999988442 111
Q ss_pred hhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeecc-CceeeEeeeecc
Q 000399 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH-DGYVTKVRIISK 1565 (1566)
Q Consensus 1507 v~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH-~~~V~~Vafspd 1565 (1566)
+. ....++.|+++++|+.|+.|++||..++..+..+.+| ...|..++++|.
T Consensus 382 ~~--------~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~ 433 (456)
T KOG0266|consen 382 IF--------SPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPT 433 (456)
T ss_pred Ee--------cccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCC
Confidence 11 1112578899999999999999999999999999999 888999998874
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-25 Score=262.32 Aligned_cols=198 Identities=15% Similarity=0.101 Sum_probs=162.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc-cchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.|++.+.||+|+||+||++.+. .++..||+|.+.......... ..+. +|+.+++.++||||++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEc------CCCceEEEEEEehhhhhhhhhHHHHH--------HHHHHHHhcCCCCEeeee
Confidence 4889999999999999988753 468899999987643322211 2223 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+++.+|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~ 144 (285)
T cd05605 67 YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred eeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC--CEEEe
Confidence 999999999999999986 998888644345588999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... .....|++.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 Dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~-------l~el~~g~~p 200 (285)
T cd05605 145 DLGLAVEIPEGET------------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCL-------IYEMIEGKSP 200 (285)
T ss_pred eCCCceecCCCCc------------cccccCCCCccCcHHhcCCCCCccccchhHHHH-------HHHHHHCCCC
Confidence 9999875431100 012247889999999988889999999999987 6666778764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-25 Score=267.84 Aligned_cols=193 Identities=18% Similarity=0.190 Sum_probs=157.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|++. .++..+|+|++.+.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~~~~~~~~~~i~~~~~~~~~ 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLK------KNDQIYAMKVVKKELVHDDEDIDWVQ-------TEKHVFEQASSNPFLVGLHSCFQT 67 (327)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhhcCCCCEeeEEEEEEe
Confidence 47999999999998863 56889999999875433222222222 588888777 69999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|..++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~ 143 (327)
T cd05617 68 TSRLFLVIEYVNGGDLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--HIKLTDYGMC 143 (327)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--CEEEeccccc
Confidence 9999999999987 99888863 34589999999999999999999999999999999999999998 7999999998
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+....... . .....||+.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 144 ~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi-------l~ell~g~~p 195 (327)
T cd05617 144 KEGLGPGD-----T------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVL-------MFEMMAGRSP 195 (327)
T ss_pred eeccCCCC-----c------eecccCCcccCCHHHHCCCCCCchheeehhHHH-------HHHHHhCCCC
Confidence 74321100 0 112348999999999999899999999999988 6777788764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-25 Score=259.48 Aligned_cols=198 Identities=19% Similarity=0.235 Sum_probs=156.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCc---ccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC---LRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~---l~HpNIV~ 239 (1566)
+|++.+.||+|+||+||+|+++ .++..+|+|.+.............. +|+.+++. ++||||++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~ni~~ 66 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDP------HSGHFVALKSVRVQTNEDGLPLSTV--------REVALLKRLEAFDHPNIVR 66 (288)
T ss_pred CceEeeEEeecCCeEEEEEEEC------CCCcEEEEEEeccCcCCCCCchHHH--------HHHHHHHHhhhcCCCCeee
Confidence 5899999999999999998863 5788999999875432221111222 35555554 47999999
Q ss_pred cccccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 240 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 240 l~~~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+++++... ..+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~- 145 (288)
T cd07863 67 LMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG- 145 (288)
T ss_pred eeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-
Confidence 99988642 468999999999999998755445588999999999999999999999999999999999999998
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||+++...... ......+|..|+|||++.+..++...|+|+.|++ .+..+.|++
T Consensus 146 -~~kl~dfg~~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~-------l~~l~~g~~ 205 (288)
T cd07863 146 -QVKLADFGLARIYSCQM------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-------FAEMFRRKP 205 (288)
T ss_pred -CEEECccCccccccCcc------------cCCCccccccccCchHhhCCCCCCcchhhhHHHH-------HHHHHhCCc
Confidence 79999999998543110 0112347888999999988889999999999987 555566664
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 206 ~ 206 (288)
T cd07863 206 L 206 (288)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-24 Score=257.77 Aligned_cols=236 Identities=16% Similarity=0.277 Sum_probs=199.3
Q ss_pred ccccccccccchHHHHHHhhccccCCCceeccC--CCCCCCCCcccccccCccCCCCceEeee-----eehhhhhccCcc
Q 000399 1258 PQRRVYDYHKSSVERQEATSNLMKCEPWFWFPT--PAASWDGPDFLGRVGGLKDESPWKIKAS-----ILSSIRAHHGAL 1330 (1566)
Q Consensus 1258 ~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~fS--pdg~~~~~~~LaSgS~D~~I~vWdl~~~-----~l~tl~gH~~~V 1330 (1566)
+.-|+|++...... ...+|++-|.+.. .+|-+ |+|||.|+++++|.++.+ +++...||++.|
T Consensus 346 ~~lr~y~~~~~~c~------ii~GH~e~vlSL~~~~~g~l-----lat~sKD~svilWr~~~~~~~~~~~a~~~gH~~sv 414 (775)
T KOG0319|consen 346 PELRLYTLPTSYCQ------IIPGHTEAVLSLDVWSSGDL-----LATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSV 414 (775)
T ss_pred CceEEEecCCCceE------EEeCchhheeeeeecccCcE-----EEEecCCceEEEEEecCCcchhhhhhhhccccccc
Confidence 55567755543332 6778999999865 55544 999999999999988543 667788999999
Q ss_pred eeeeecCc-ceEEEeeccCCCcccceeeEEecccc---------cccccccccccccceEEeecCCceeec--cCcEEEe
Q 000399 1331 RSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTRIN---------CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVW 1398 (1566)
Q Consensus 1331 ~slafspd-~~~LaSgS~~~~~D~tVrlWDl~tg~---------~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLW 1398 (1566)
.+|+++.. ...|+|+|. |+|+++|++...+ +..+-..|...||||+++|..+.+|+| |++.+||
T Consensus 415 gava~~~~~asffvsvS~----D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW 490 (775)
T KOG0319|consen 415 GAVAGSKLGASFFVSVSQ----DCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIW 490 (775)
T ss_pred ceeeecccCccEEEEecC----CceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeee
Confidence 99999774 468999998 9999999997622 122346799999999999999999988 9999999
Q ss_pred ecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEE
Q 000399 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1566)
Q Consensus 1399 Dl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIr 1478 (1566)
+++.++.+.++.+| ..+|.+|.|+|. .+.++|+|.|+||+
T Consensus 491 ~le~~~l~~vLsGH------------------------------~RGvw~V~Fs~~----------dq~laT~SgD~TvK 530 (775)
T KOG0319|consen 491 DLEQLRLLGVLSGH------------------------------TRGVWCVSFSKN----------DQLLATCSGDKTVK 530 (775)
T ss_pred cccCceEEEEeeCC------------------------------ccceEEEEeccc----------cceeEeccCCceEE
Confidence 99999999999886 678999999997 78999999999999
Q ss_pred EEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceee
Q 000399 1479 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1558 (1566)
Q Consensus 1479 lWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~ 1558 (1566)
+|.+.++.|+.+|.||...| - ...|-.+|+.|+||+.||.|++|++.+++|+.++.+|+..|.
T Consensus 531 IW~is~fSClkT~eGH~~aV------l-----------ra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvW 593 (775)
T KOG0319|consen 531 IWSISTFSCLKTFEGHTSAV------L-----------RASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVW 593 (775)
T ss_pred EEEeccceeeeeecCcccee------E-----------eeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeE
Confidence 99999999999999995543 2 233446778999999999999999999999999999999999
Q ss_pred Eeeeecc
Q 000399 1559 KVRIISK 1565 (1566)
Q Consensus 1559 ~Vafspd 1565 (1566)
+++-+|+
T Consensus 594 aL~~~~~ 600 (775)
T KOG0319|consen 594 ALSVSPL 600 (775)
T ss_pred EEeecCc
Confidence 9998875
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-25 Score=280.25 Aligned_cols=174 Identities=17% Similarity=0.042 Sum_probs=113.8
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|++.- .....+..+|+|.+...... ..+.+ | .++...+.+++.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~--~~~~~~~~vAvK~~~~~~~~----e~~~~--------e--~l~~~~~~~~~~ 193 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVN--KQSKKEGKYVLKKATEYGAV----EIWMN--------E--RVRRACPNSCAD 193 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcC--CccccCcEEEEEEecccchh----HHHHH--------H--HHHhhchhhHHH
Confidence 45689999999999999999998631 00122788999987542111 11111 1 111222333433
Q ss_pred ccccc------cccCceeeeccCCcc-chhhhhccCccc------------------ccchhHHHHHHHHHHHHHHHHhh
Q 000399 240 VLGLL------KTSGLITSVIPKTPY-TLENILQFSPNA------------------LKSEWHVRFLMYQLLSAIAYLHS 294 (1566)
Q Consensus 240 l~~~~------~~~~~l~LV~E~~~g-sL~~~l~~~~~~------------------~l~~~~~~~i~~Qil~aL~yLH~ 294 (1566)
+...+ .....+++||||+++ +|.+++...... ......++.++.||+.||.|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~ 273 (566)
T PLN03225 194 FVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS 273 (566)
T ss_pred HHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 33332 345689999999997 999888632110 01223466799999999999999
Q ss_pred ccccCCCccCCCccccc-cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 295 LGIAHRSVCPSNVLLTD-SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 295 ~gIiHrDLKp~NILl~~-~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
++|+||||||+|||++. ++ .+||+|||+|+........ ......+++.|||||.+
T Consensus 274 ~gIiHRDLKP~NILl~~~~~--~~KL~DFGlA~~l~~~~~~----------~~~~~~~t~~Y~APE~~ 329 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSG--SFKIIDLGAAADLRVGINY----------IPKEFLLDPRYAAPEQY 329 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCC--cEEEEeCCCcccccccccc----------CCcccccCCCccChHHh
Confidence 99999999999999986 45 6999999999854321000 01123466777777743
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.4e-25 Score=249.84 Aligned_cols=222 Identities=17% Similarity=0.222 Sum_probs=172.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccccc-chhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESK-NFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~-~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++|-++..||+|+|++||+|.+ +...+.||+|+-..++....+.+ .+.+ .++||.+|-+.|+||.||+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFD------l~EqRYvAvKIHqlNK~WrdEKKeNYhK----HAcREyrIHKeLDHpRIVK 531 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFD------LTEQRYVAVKIHQLNKNWRDEKKENYHK----HACREYRIHKELDHPRIVK 531 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcc------cchhheeeEeeehhccchhhHhhhhHHH----HHHHHHhhhhccCcceeee
Confidence 45899999999999999999997 47889999998665544433332 2333 5679999999999999999
Q ss_pred cccccc-ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhc--cccCCCccCCCccccccch-
Q 000399 240 VLGLLK-TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL--GIAHRSVCPSNVLLTDSCW- 314 (1566)
Q Consensus 240 l~~~~~-~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~--gIiHrDLKp~NILl~~~~~- 314 (1566)
+|++|. +.+.+|-|+|||+| +|.-+|+ ..+.+++.+++.|+.||+.||.||.+. -|||-||||.|||+.++..
T Consensus 532 lYDyfslDtdsFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 532 LYDYFSLDTDSFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred eeeeeeeccccceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence 999996 55689999999998 9999998 466789999999999999999999985 5999999999999976543
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc----ccchhhccccccccccCCchhhhHHHhh
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKL 390 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~----~~~y~~~~d~Ws~G~isnfeyL~~ln~~ 390 (1566)
..+||+|||+++...+....+...+. ......||.||.+||.|. -...+.++|+|+.|+| ++..+
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdGme----LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVI-------FyQCl 678 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDGME----LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVI-------FYQCL 678 (775)
T ss_pred ceeEeeecchhhhccCCccCccccee----eecccCceeeecCcceeecCCCCCccccceeeEeeehh-------hhhhh
Confidence 48999999999987653322111111 223445999999999774 2346678999999999 66666
Q ss_pred ccccc--CCccceeecc
Q 000399 391 AGRRW--GDYTFHMVMP 405 (1566)
Q Consensus 391 agrs~--~dl~q~pv~p 405 (1566)
-||.+ ++.+|-.|+.
T Consensus 679 YGrKPFGhnqsQQdILq 695 (775)
T KOG1151|consen 679 YGRKPFGHNQSQQDILQ 695 (775)
T ss_pred ccCCCCCCchhHHHHHh
Confidence 77764 4555544443
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-25 Score=268.50 Aligned_cols=196 Identities=19% Similarity=0.241 Sum_probs=159.7
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++++.||+|+||.||+|.+. ..+..+|+|.+............+. +|+.+++.++||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 80 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIS 80 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEec------CCCceEEEEEeCCcccChHHHHHHH--------HHHHHHHHhCCCchhc
Confidence 4678999999999999999998763 4678899999875433322223333 6999999999999999
Q ss_pred cccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++... ...|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~ 156 (355)
T cd07874 81 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_pred eeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence 99988643 35799999999988887752 367788899999999999999999999999999999999988
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||+++...... ......||+.|+|||++.+..++..+|+|+.|++ .+..++|+
T Consensus 157 --~~kl~Dfg~~~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~ 215 (355)
T cd07874 157 --TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGEMVRHK 215 (355)
T ss_pred --CEEEeeCcccccCCCcc------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHH-------HHHHHhCC
Confidence 79999999998543210 1122358899999999999899999999999987 66677776
Q ss_pred c
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 216 ~ 216 (355)
T cd07874 216 I 216 (355)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=236.33 Aligned_cols=258 Identities=16% Similarity=0.213 Sum_probs=194.1
Q ss_pred HHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCC
Q 000399 1274 EATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1566)
Q Consensus 1274 ~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~ 1350 (1566)
....++.+|++.|++ .+|+.+| ++|||.|....+|++.++ ....+.||..+|+++.|+.||.+||||+.
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l-----~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdm--- 126 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNL-----VATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDM--- 126 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCce-----EEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCC---
Confidence 345668889999998 6888888 999999999999999987 67889999999999999999999999998
Q ss_pred cccceeeEEec------------------------------------------ccccccccccccccccceEEeecCCce
Q 000399 1351 FKGTVQKWELT------------------------------------------RINCVSGYYGHEEVVNDICVLSSSGRI 1388 (1566)
Q Consensus 1351 ~D~tVrlWDl~------------------------------------------tg~~i~tl~gH~~~V~sVafsp~g~~L 1388 (1566)
+|.|+||+.. ++...+.+.||+.++++=.|.|+|+++
T Consensus 127 -sG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~ 205 (399)
T KOG0296|consen 127 -SGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRI 205 (399)
T ss_pred -CccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceE
Confidence 6666666653 333345678999999999999999999
Q ss_pred eec--cCcEEEeecCCCcEEEEeecccccccc------------cCCCC--------CcccccccCC-CCCCCCcccccc
Q 000399 1389 ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH------------GGSPS--------SSISKINTDQ-VGMLNSNTLSSG 1445 (1566)
Q Consensus 1389 aSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~------------~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~ 1445 (1566)
+++ ||+|++||+.+|+++..+......... .+... ..+++..... ........+...
T Consensus 206 ~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~ 285 (399)
T KOG0296|consen 206 LTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEEL 285 (399)
T ss_pred EEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhh
Confidence 887 999999999999999888632111000 01011 1111111111 111112234455
Q ss_pred cccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchh
Q 000399 1446 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1566)
Q Consensus 1446 V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~ 1525 (1566)
+.|+.+.|. +..-.+.++|+-||+|.|||....+..+.+. |...|..+.|-+. .
T Consensus 286 ~esve~~~~-------ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-------he~~V~~l~w~~t------------~ 339 (399)
T KOG0296|consen 286 DESVESIPS-------SSKLPLAACGSVDGTIAIYDLAASTLRHICE-------HEDGVTKLKWLNT------------D 339 (399)
T ss_pred hhhhhhccc-------ccccchhhcccccceEEEEecccchhheecc-------CCCceEEEEEcCc------------c
Confidence 556655553 1224688999999999999999777665554 3444667776542 4
Q ss_pred HHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1526 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1526 ~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
+|+++..||.|+.||.|+|+++.++.||...|.+.+++|++
T Consensus 340 ~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~ 380 (399)
T KOG0296|consen 340 YLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQK 380 (399)
T ss_pred hheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCC
Confidence 89999999999999999999999999999999999999974
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-25 Score=247.01 Aligned_cols=216 Identities=18% Similarity=0.314 Sum_probs=185.0
Q ss_pred CCCceeccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEe
Q 000399 1282 CEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL 1360 (1566)
Q Consensus 1282 H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl 1360 (1566)
|.-.+....|+|+. |++|+..|...+|+..+- ....+.+|..+|+++.|+++|.+++||+. ||.||+|+.
T Consensus 97 c~V~~v~WtPeGRR-----Lltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~----gG~iKyWqp 167 (464)
T KOG0284|consen 97 CPVNVVRWTPEGRR-----LLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDK----GGMIKYWQP 167 (464)
T ss_pred cceeeEEEcCCCce-----eEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCC----CceEEeccc
Confidence 33334447999998 999999999999998653 34456799999999999999999999998 899999997
Q ss_pred ccccccccccc-ccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCC
Q 000399 1361 TRINCVSGYYG-HEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1437 (1566)
Q Consensus 1361 ~tg~~i~tl~g-H~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~ 1437 (1566)
.-. .+..+.+ |...|.+++|+|....++|| ||+|+|||....+..+++.+|
T Consensus 168 nmn-nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GH------------------------- 221 (464)
T KOG0284|consen 168 NMN-NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGH------------------------- 221 (464)
T ss_pred chh-hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccC-------------------------
Confidence 644 4445555 45999999999999888877 999999999999888888776
Q ss_pred CCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccC
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1566)
Q Consensus 1438 ~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~ 1517 (1566)
.-.|.+++|||. -..+++||.|..|++||.++|+|+.++.+| ...|.++.|+
T Consensus 222 -----gwdVksvdWHP~----------kgLiasgskDnlVKlWDprSg~cl~tlh~H------KntVl~~~f~------- 273 (464)
T KOG0284|consen 222 -----GWDVKSVDWHPT----------KGLIASGSKDNLVKLWDPRSGSCLATLHGH------KNTVLAVKFN------- 273 (464)
T ss_pred -----CCCcceeccCCc----------cceeEEccCCceeEeecCCCcchhhhhhhc------cceEEEEEEc-------
Confidence 344789999997 569999999999999999999999998877 4445556555
Q ss_pred CCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1518 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1518 ~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
+++.||+|+|.|..++++|+|+.+.+.++++|...|++++|+|
T Consensus 274 ----~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP 316 (464)
T KOG0284|consen 274 ----PNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHP 316 (464)
T ss_pred ----CCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccc
Confidence 6668999999999999999999999999999999999999998
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=241.94 Aligned_cols=253 Identities=14% Similarity=0.197 Sum_probs=195.4
Q ss_pred ceec--cCCCCCCCCCcccccccCccCCCCceEeeeeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecc
Q 000399 1285 WFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1362 (1566)
Q Consensus 1285 ~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~t 1362 (1566)
-|.+ ++.+|.. ||+|+.||.+++|+..++.+.++..|.++|.++.|+.+|++++|++. |+++.+||..+
T Consensus 237 dVT~L~Wn~~G~~-----LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~v----D~ttilwd~~~ 307 (524)
T KOG0273|consen 237 DVTSLDWNNDGTL-----LATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGV----DGTTILWDAHT 307 (524)
T ss_pred CcceEEecCCCCe-----EEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccC----CccEEEEeccC
Confidence 3444 5666777 99999999999999999999999999999999999999999999999 99999999977
Q ss_pred cccccccccccccccceEEeecCCceeec-cCcEEEeecCCCcEEEEeeccccc-----------ccccCCCCCcccccc
Q 000399 1363 INCVSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFAEQSMD-----------SLHGGSPSSSISKIN 1430 (1566)
Q Consensus 1363 g~~i~tl~gH~~~V~sVafsp~g~~LaSg-DgtIkLWDl~tg~~l~~l~~h~~~-----------~~~~~~~~~~~~~~~ 1430 (1566)
|.+...+.-|..+-.+|.|-....+..+. |+.|+|+-+...+++.++.+|+.. ...+++.+...++|.
T Consensus 308 g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs 387 (524)
T KOG0273|consen 308 GTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWS 387 (524)
T ss_pred ceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeee
Confidence 76666666666555556665554444333 666666666666666666666544 222344455555665
Q ss_pred cCCCC-CCCCcccccccccccccchhHHHhhhhh-ccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhh
Q 000399 1431 TDQVG-MLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1566)
Q Consensus 1431 ~~~~~-~~~~~~~~~~V~svafsp~~~t~v~~~p-dg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~ 1508 (1566)
....+ .-.+..|+..|..+.|+|.+ ++.-+| ++..+++++.|++|++||+..|.++++|..| ..+|++++
T Consensus 388 ~~~~~~~~~l~~Hskei~t~~wsp~g--~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH------~~pVysva 459 (524)
T KOG0273|consen 388 MGQSNSVHDLQAHSKEIYTIKWSPTG--PVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKH------QEPVYSVA 459 (524)
T ss_pred cCCCcchhhhhhhccceeeEeecCCC--CccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccC------CCceEEEE
Confidence 43333 33455678888888888873 333333 5678999999999999999999999999876 56677776
Q ss_pred ccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1509 ~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
|+ |+|+++|+|+.||.|.+|++++++.++.+.+ ++.|..|+|+-+|
T Consensus 460 fS-----------~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G 505 (524)
T KOG0273|consen 460 FS-----------PNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAG 505 (524)
T ss_pred ec-----------CCCcEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCC
Confidence 65 6778999999999999999999999999986 5779999998775
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.9e-25 Score=282.86 Aligned_cols=201 Identities=19% Similarity=0.209 Sum_probs=166.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
++.....||.|.||.||-|.+ .++|...|+|.+.-........+.+. +|..+|..++|||||++||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN------~~tGellAvKEI~iq~~~~k~~~~i~--------eEm~vlE~lnHpNlV~YyG 1301 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVN------LDTGELLAVKEIKIQDSDHKTFKLIA--------EEMKVLEGLNHPNLVRYYG 1301 (1509)
T ss_pred eeccccccCCcceeeeEEeec------CCccchhhhhhhhcCccccccCcchH--------HHHHHHHhccCccccccCc
Confidence 677889999999999998875 58999999999876544433333333 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+-.+.+..+|.||||.+ +|.+++.. ++...+...+.|..|++.|+.|||+.|||||||||+||+|+.+| .+|+.|
T Consensus 1302 VEvHRekv~IFMEyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g--~iK~~D 1377 (1509)
T KOG4645|consen 1302 VEVHREKVYIFMEYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG--LIKYGD 1377 (1509)
T ss_pred eeecHHHHHHHHHHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC--cEEeec
Confidence 99999999999999996 99999983 44467777889999999999999999999999999999999999 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc---hhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD---WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~---y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||.|.......+.. ... ..+..||+.|||||++.+.. -..+.|+|+.||+ .+++.+||++
T Consensus 1378 FGsa~ki~~~~~~~---~~e----l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCV-------VlEM~tGkrP 1440 (1509)
T KOG4645|consen 1378 FGSAVKIKNNAQTM---PGE----LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCV-------VLEMATGKRP 1440 (1509)
T ss_pred ccceeEecCchhcC---CHH----HHhhcCCchhcCchhhcccccCCCCcchhhhcccce-------EEEeecCCCc
Confidence 99999766421110 011 12456999999999997544 4458899999999 8999999874
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.4e-25 Score=267.72 Aligned_cols=196 Identities=19% Similarity=0.253 Sum_probs=160.1
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|.+. ..+..+|||++............+. +|+.+++.++||||++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~ii~ 87 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDA------ILERNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIG 87 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEEC------CCCcEEEEEEeCccccCchhHHHHH--------HHHHHHHhcCCCCccc
Confidence 4678999999999999999998863 4678899999875433322223333 5999999999999999
Q ss_pred cccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++... ..+|+||||++++|.+.+.. .++...++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 163 (364)
T cd07875 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163 (364)
T ss_pred cceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC
Confidence 99988643 35799999999988888752 367788899999999999999999999999999999999998
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||+++..... .......+|+.|+|||++.+..++..+|+|+.|++ .+..+.|+
T Consensus 164 --~~kL~DfG~a~~~~~~------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i-------l~ell~g~ 222 (364)
T cd07875 164 --TLKILDFGLARTAGTS------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGEMIKGG 222 (364)
T ss_pred --cEEEEeCCCccccCCC------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHH-------HHHHHhCC
Confidence 7999999999854320 01122358899999999999899999999999988 66777776
Q ss_pred c
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 223 ~ 223 (364)
T cd07875 223 V 223 (364)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.8e-25 Score=261.73 Aligned_cols=196 Identities=18% Similarity=0.178 Sum_probs=151.5
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
.++||+|+||+||+|+++ ...++..+|+|.+...... .... +|+.+|+.++||||+++++++..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~----~~~~~~~~aiK~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRK----DGKDDRDYALKQIEGTGIS----MSAC--------REIALLRELKHPNVISLQKVFLS 69 (317)
T ss_pred ccccccCCCeEEEEEEEc----cCCCCceEEEEEECCCCCc----HHHH--------HHHHHHHhcCCCCCcceeeeEec
Confidence 568999999999998752 1245678999988643211 1122 69999999999999999999854
Q ss_pred --cCceeeeccCCccchhhhhccCc-------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc----ccc
Q 000399 247 --SGLITSVIPKTPYTLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 313 (1566)
Q Consensus 247 --~~~l~LV~E~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~----~~~ 313 (1566)
+..+|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~ 149 (317)
T cd07868 70 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence 45789999999999988875321 22478888999999999999999999999999999999994 334
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
.+||+|||+|+........ ........+|+.|+|||++.+ ..|+..+|+|+.|++ .+..+.|
T Consensus 150 --~~kl~DfG~a~~~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i-------l~el~~g 212 (317)
T cd07868 150 --RVKIADMGFARLFNSPLKP--------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI-------FAELLTS 212 (317)
T ss_pred --cEEEeecCceeccCCCCcc--------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHH-------HHHHHhC
Confidence 7999999999864421100 001123458999999998876 458889999999987 6777778
Q ss_pred ccc
Q 000399 393 RRW 395 (1566)
Q Consensus 393 rs~ 395 (1566)
+++
T Consensus 213 ~~~ 215 (317)
T cd07868 213 EPI 215 (317)
T ss_pred CCC
Confidence 754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-25 Score=283.54 Aligned_cols=211 Identities=18% Similarity=0.103 Sum_probs=163.5
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|++. .++..||+|++........ ...+++ +|+++++.++||||+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~------~tg~~VAIK~I~~~l~~~e~~~~rfl--------rEi~ILs~L~HPNIVkl 67 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDP------VCSRRVALKKIREDLSENPLLKKRFL--------REAKIAADLIHPGIVPV 67 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEEC------CCCcEEEEEEECcccccCHHHHHHHH--------HHHHHHHhCCCcCcCeE
Confidence 57999999999999999998863 4688899999875432222 122344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc---------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~---------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
++++.+++..|+||||++| +|.+++.... ....+...+..++.||+.||.|||++||+||||||+|||++
T Consensus 68 ~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd 147 (932)
T PRK13184 68 YSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG 147 (932)
T ss_pred EEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc
Confidence 9999999999999999997 9999886311 11234456778999999999999999999999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccC--CCCC-----CceeeeecCCcccccccccccccccchhhccccccccccCCchh
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCT--IPTS-----PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 383 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~--~~~~-----~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfey 383 (1566)
.++ .+||+|||+|+......... .... ...........||+.|||||++.+..++..+|+|+.|++
T Consensus 148 ~dg--~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVI----- 220 (932)
T PRK13184 148 LFG--EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVI----- 220 (932)
T ss_pred CCC--CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHH-----
Confidence 988 79999999998652111000 0000 000001123468999999999999899999999999988
Q ss_pred hhHHHhhccccc
Q 000399 384 LLFLNKLAGRRW 395 (1566)
Q Consensus 384 L~~ln~~agrs~ 395 (1566)
.+..++|+.+
T Consensus 221 --LyELLTG~~P 230 (932)
T PRK13184 221 --LYQMLTLSFP 230 (932)
T ss_pred --HHHHHHCCCC
Confidence 7777888754
|
|
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.3e-25 Score=262.95 Aligned_cols=196 Identities=17% Similarity=0.185 Sum_probs=163.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||++++. .++..+|+|.+.... ......++. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCCCCeE
Confidence 368999999999999999998863 568889999987532 111122333 69999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhc-cccCCCccCCCccccccchhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++..++.+++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--~~k 144 (331)
T cd06649 69 YGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIK 144 (331)
T ss_pred EEEEEECCEEEEEeecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--cEE
Confidence 9999999999999999997 99999973 34578888999999999999999986 699999999999999998 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++..... ......|++.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 l~Dfg~~~~~~~~-------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~tg~~p 201 (331)
T cd06649 145 LCDFGVSGQLIDS-------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS-------LVELAIGRYP 201 (331)
T ss_pred EccCccccccccc-------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHH-------HHHHHhCCCC
Confidence 9999998754310 0112348899999999998889999999999987 6777888754
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.2e-25 Score=267.56 Aligned_cols=206 Identities=18% Similarity=0.160 Sum_probs=160.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|++.- .+...++..||+|.+...... .....++ +|+.+|+.+ +|||||+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~~~-~~~~~~~--------~E~~il~~l~~h~nIv~ 106 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFG-LGKEDNVLRVAVKMLKASAHT-DEREALM--------SELKILSHLGQHKNIVN 106 (374)
T ss_pred HHHceehheecCCCcccEEEEEEec-CCcccccceeEEEeccCCCCH-HHHHHHH--------HHHHHHHhhccCCceee
Confidence 4589999999999999999887421 222345678999998754222 1122233 599999999 8999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCc-------------------------------------------------
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP------------------------------------------------- 269 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------------------------------------------- 269 (1566)
+++++...+.+|+||||+++ +|.++++...
T Consensus 107 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (374)
T cd05106 107 LLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRP 186 (374)
T ss_pred EeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCC
Confidence 99999999999999999996 9999885321
Q ss_pred -------------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcccc
Q 000399 270 -------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 330 (1566)
Q Consensus 270 -------------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~ 330 (1566)
..+++...++.++.||+.||.|||++||+||||||+|||+++++ .+||+|||+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~--~~kL~DfGla~~~~~ 264 (374)
T cd05106 187 VSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR--VAKICDFGLARDIMN 264 (374)
T ss_pred ccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC--eEEEeeceeeeeccC
Confidence 12356677889999999999999999999999999999999888 799999999985432
Q ss_pred ccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 331 ADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
... ........++..|||||++.+..++...|+|+.|++ .++.++ |+.
T Consensus 265 ~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvi-------l~ellt~G~~ 313 (374)
T cd05106 265 DSN---------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL-------LWEIFSLGKS 313 (374)
T ss_pred Ccc---------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 100 011122335667999999988889999999999987 666665 665
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-25 Score=257.05 Aligned_cols=192 Identities=16% Similarity=0.088 Sum_probs=155.8
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
||+|+||+||++.++ .++..+|+|.+.+...... ....+. +|+.+|+.++||||+++++++....
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~~~~~~~~ 66 (280)
T cd05608 1 LGKGGFGEVSACQMR------ATGKLYACKKLNKKRLKKRKGYEGAM--------VEKRILAKVHSRFIVSLAYAFQTKT 66 (280)
T ss_pred CCCCCceeEEEEEEc------cCCcEEEEEeeeHHHHhhhHHHHHHH--------HHHHHHHhCCCCcEeeeeEEEcCCC
Confidence 699999999988763 5788999999876533222 112222 5899999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 249 LITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+|+||||+++ +|.+++... ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+|||++
T Consensus 67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~ 144 (280)
T cd05608 67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--NVRISDLGLA 144 (280)
T ss_pred eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCccc
Confidence 99999999986 998877431 234578899999999999999999999999999999999999988 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+....... ......||+.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 ~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~i-------l~el~~g~~p 196 (280)
T cd05608 145 VELKDGQS-----------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVT-------LYEMIAARGP 196 (280)
T ss_pred eecCCCCc-----------cccccCCCcCccCHHHhcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 75432110 0122358899999999999899999999999987 6777778754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.2e-25 Score=264.87 Aligned_cols=180 Identities=18% Similarity=0.170 Sum_probs=152.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++++.||+|+||.||+|++. .++..||+|+..+.. ..+|+.+|+.++||||++++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~valK~~~~~~----------------~~~E~~~l~~l~h~~iv~~~ 123 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKP------GQPDPVVLKIGQKGT----------------TLIEAMLLQNVNHPSVIRMK 123 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEEC------CCCceEEEEeCCccc----------------cHHHHHHHHhCCCCCCcChh
Confidence 47999999999999999998863 457788999743321 12588899999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+++......++|||++.++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 124 ~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kl~D 200 (357)
T PHA03209 124 DTLVSGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIGD 200 (357)
T ss_pred heEEeCCeeEEEEEccCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEec
Confidence 99999999999999999999998864 334578889999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||+++..... . ...+..||..|+|||++.+..|+..+|+|+.|++
T Consensus 201 fG~a~~~~~~--------~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvv 245 (357)
T PHA03209 201 LGAAQFPVVA--------P----AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIV 245 (357)
T ss_pred CccccccccC--------c----ccccccccccccCCeecCCCCCCchhhHHHHHHH
Confidence 9999753310 0 0123358899999999998899999999999987
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.9e-25 Score=275.53 Aligned_cols=201 Identities=13% Similarity=0.123 Sum_probs=160.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
..|.+.+.||+|+||.||+|.+.. ..+..+|+|.+.... ........ +|+.+|+.++|||||+++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~-----~~~~~vv~K~~~~~~---~~~~~~~~-------~E~~~l~~l~Hpniv~~~ 131 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGS-----DPKEKVVAKFVMLND---ERQAAYAR-------SELHCLAACDHFGIVKHF 131 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcC-----CCCeEEEEEEcccCC---HHHHHHHH-------HHHHHHHhCCCCCEeEEE
Confidence 359999999999999999987531 225677888764321 11122222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++...+.+||||||+++ +|.+++... ...++++..+..++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 132 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--~~k 209 (478)
T PTZ00267 132 DDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--IIK 209 (478)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC--cEE
Confidence 999999999999999986 999888531 234578889999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++........ .......||+.|+|||++.+..++..+|+|+.|++ .+..++|+.+
T Consensus 210 L~DFgla~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~-------l~el~tg~~P 270 (478)
T PTZ00267 210 LGDFGFSKQYSDSVSL---------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVI-------LYELLTLHRP 270 (478)
T ss_pred EEeCcCceecCCcccc---------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHH-------HHHHHhCCCC
Confidence 9999999864421000 01123458999999999999899999999999988 6777788654
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-23 Score=238.19 Aligned_cols=258 Identities=16% Similarity=0.186 Sum_probs=205.0
Q ss_pred CCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-----eehhhh------hc----cCcceeeeecCcceEEEe
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-----ILSSIR------AH----HGALRSVAVGQDECTVFT 1344 (1566)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-----~l~tl~------gH----~~~V~slafspd~~~LaS 1344 (1566)
|+..|.+ ++|-.. +++++|+.|-+.++|++... ....++ ++ +..|++++|+.+|+.||+
T Consensus 177 ~~~~V~~~~WnP~~~----~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 177 HESEVFICAWNPLRD----GLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred CCCceEEEecCchhh----hhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 6666665 555333 23999999999999998631 111122 22 368999999999999999
Q ss_pred eccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccc-------
Q 000399 1345 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD------- 1415 (1566)
Q Consensus 1345 gS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~------- 1415 (1566)
|+. ||.+++|+. +|..+.+|..|.++|.++.|+..|.+|+|+ |+++.+||..+|.....+..|+..
T Consensus 253 G~~----~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~ 327 (524)
T KOG0273|consen 253 GSE----DGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQ 327 (524)
T ss_pred eec----CcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEe
Confidence 997 999999996 577789999999999999999999999877 999999999999999988876543
Q ss_pred ---ccccCCCCCcccccc-cCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee
Q 000399 1416 ---SLHGGSPSSSISKIN-TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW 1491 (1566)
Q Consensus 1416 ---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~ 1491 (1566)
.+.+.+.+..+.+.. +.......+.+|.+.|.++.|+|. |.+|+++|.|+|+++|....+.+.+.+
T Consensus 328 ~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~t----------g~LLaS~SdD~TlkiWs~~~~~~~~~l 397 (524)
T KOG0273|consen 328 SNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPT----------GSLLASCSDDGTLKIWSMGQSNSVHDL 397 (524)
T ss_pred cCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCC----------CceEEEecCCCeeEeeecCCCcchhhh
Confidence 111222222222222 233444556779999999999987 899999999999999999999999999
Q ss_pred ccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.+|. ..|..+.++|.+.... -...+..|++++.|++|++||+..|.++.++..|..+|++|+|+|+|
T Consensus 398 ~~Hs------kei~t~~wsp~g~v~~--n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g 464 (524)
T KOG0273|consen 398 QAHS------KEIYTIKWSPTGPVTS--NPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNG 464 (524)
T ss_pred hhhc------cceeeEeecCCCCccC--CCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCC
Confidence 8874 4567888888775322 22456789999999999999999999999999999999999999987
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-23 Score=253.69 Aligned_cols=249 Identities=16% Similarity=0.206 Sum_probs=195.4
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
+..|.+.|+. |+|.+.+ ++|||+|.+|+||+.++. ++.++.||-+-|+.+.|++.-.+++|+|. |.||
T Consensus 47 FdeHdGpVRgv~FH~~qpl-----FVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASD----DQTI 117 (1202)
T KOG0292|consen 47 FDEHDGPVRGVDFHPTQPL-----FVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASD----DQTI 117 (1202)
T ss_pred hhccCCccceeeecCCCCe-----EEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccC----CCeE
Confidence 4569999998 9999988 999999999999999986 89999999999999999999999999998 9999
Q ss_pred eeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccccc-ccC
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI-NTD 1432 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~-~~~ 1432 (1566)
+||+..+++|+++++||...|.|..|+|....+||+ |.+|||||+..-+. +......-........ .+..++ ..+
T Consensus 118 rIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRk-k~~~pg~~e~~~~~~~-~~~dLfg~~D 195 (1202)
T KOG0292|consen 118 RIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRK-KNKAPGSLEDQMRGQQ-GNSDLFGQTD 195 (1202)
T ss_pred EEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhc-cCCCCCCchhhhhccc-cchhhcCCcC
Confidence 999999999999999999999999999999999888 99999999862111 1111100000000000 111122 122
Q ss_pred CCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCc--eeeeeccCCcccCchhhHHHhhcc
Q 000399 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ--KLHLWRGEPTELGFPSLVSAICAC 1510 (1566)
Q Consensus 1433 ~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~--~l~~~~~h~~~v~~~~~V~sv~~s 1510 (1566)
-.--..+.+|..+|+.++|+|. -..+++|+.|..|++|....-+ .+.+.++| .+.|+++-|+
T Consensus 196 aVVK~VLEGHDRGVNwaAfhpT----------lpliVSG~DDRqVKlWrmnetKaWEvDtcrgH------~nnVssvlfh 259 (1202)
T KOG0292|consen 196 AVVKHVLEGHDRGVNWAAFHPT----------LPLIVSGADDRQVKLWRMNETKAWEVDTCRGH------YNNVSSVLFH 259 (1202)
T ss_pred eeeeeeecccccccceEEecCC----------cceEEecCCcceeeEEEeccccceeehhhhcc------cCCcceEEec
Confidence 2333456789999999999997 5799999999999999987433 23344444 5567777776
Q ss_pred CCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1511 ~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
|.. ..|+|.|+|+.|++||+...+.+++++--.+.-..++.+|.
T Consensus 260 p~q-----------~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~ 303 (1202)
T KOG0292|consen 260 PHQ-----------DLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPE 303 (1202)
T ss_pred Ccc-----------ceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCC
Confidence 544 58999999999999999999999999765666777777775
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-25 Score=243.09 Aligned_cols=189 Identities=21% Similarity=0.307 Sum_probs=155.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
-+.+..+.||-|+||+||-++|. .+|+.||+|++..-.......+. .+||+.+|..++|.||+..+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDP------RdgrrvalkK~pnvfq~L~s~kr--------vFre~kmLcfFkHdNVLSaL 118 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDP------RSGKRVALKKMPNVFQNLASCKR--------VFREIKMLSSFRHDNVLSLL 118 (449)
T ss_pred ccCCCCCcccccceeEEEeccCC------CCccchhHhhcchHHHHHHHHHH--------HHHHHHHHHhhccccHHHHH
Confidence 35677899999999999988873 68999999998754333333333 34799999999999999999
Q ss_pred ccccccC-----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 242 GLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 242 ~~~~~~~-----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++..-.. .+|+|+|++..+|..+|- ....++..+++-+++||++||+|||+.+|.||||||.|+|++.++ .
T Consensus 119 DILQPph~dfFqEiYV~TELmQSDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC--v 194 (449)
T KOG0664|consen 119 DILQPANPSFFQELYVLTELMQSDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC--I 194 (449)
T ss_pred HhcCCCCchHHHHHHHHHHHHHhhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc--e
Confidence 9887553 689999999999999997 345688999999999999999999999999999999999999999 8
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhcccccccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGEL 378 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~i 378 (1566)
+||||||+||.....+. . .++.-+-|-+|+|||++.+. .|+..+|+|+.|||
T Consensus 195 LKICDFGLARvee~d~~-----~-----hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCI 247 (449)
T KOG0664|consen 195 LKICDFGLARTWDQRDR-----L-----NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCI 247 (449)
T ss_pred EEecccccccccchhhh-----h-----hhHHHHHHHHhccHHHhhcchhhcCccceehhhHH
Confidence 99999999995432110 0 11222467889999999764 68999999999998
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-24 Score=256.91 Aligned_cols=198 Identities=15% Similarity=0.119 Sum_probs=153.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhcc----------CCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~ 230 (1566)
.++|++.+.||+|+||.||+|.+.... .....+..||+|.+.... ......++. +|+.+|.
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~ 74 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFL--------KEVKILS 74 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHH--------HHHHHHh
Confidence 357999999999999999988642100 011245579999987532 222223344 5999999
Q ss_pred cccCCCcccccccccccCceeeeccCCcc-chhhhhccCcc-----------------cccchhHHHHHHHHHHHHHHHH
Q 000399 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPN-----------------ALKSEWHVRFLMYQLLSAIAYL 292 (1566)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-----------------~~l~~~~~~~i~~Qil~aL~yL 292 (1566)
.++||||+++++++.+.+..++||||+++ +|.+++..... ..++...+..++.||+.||.||
T Consensus 75 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 154 (304)
T cd05096 75 RLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154 (304)
T ss_pred hcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999986 99998863211 1245567788999999999999
Q ss_pred hhccccCCCccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccc
Q 000399 293 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNR 372 (1566)
Q Consensus 293 H~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~ 372 (1566)
|++||+||||||+|||++.++ .+||+|||+++....... ........++..|+|||++.+..++...|+
T Consensus 155 H~~~ivH~dlkp~Nill~~~~--~~kl~DfG~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 223 (304)
T cd05096 155 SSLNFVHRDLATRNCLVGENL--TIKIADFGMSRNLYAGDY---------YRIQGRAVLPIRWMAWECILMGKFTTASDV 223 (304)
T ss_pred HHCCccccCcchhheEEcCCc--cEEECCCccceecccCce---------eEecCcCCCCccccCHHHHhcCCCCchhhh
Confidence 999999999999999999988 799999999985432100 001122345778999999988889999999
Q ss_pred cccccc
Q 000399 373 WWRGEL 378 (1566)
Q Consensus 373 Ws~G~i 378 (1566)
|+.|++
T Consensus 224 ~slG~~ 229 (304)
T cd05096 224 WAFGVT 229 (304)
T ss_pred HHHHHH
Confidence 999987
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-25 Score=262.20 Aligned_cols=189 Identities=17% Similarity=0.195 Sum_probs=149.4
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcc---cCCCccccccccc
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL---RHPNVAPVLGLLK 245 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l---~HpNIV~l~~~~~ 245 (1566)
||+|+||+||+|+++ .++..+|+|++.+...... .....+ +|..++..+ +||||+++++++.
T Consensus 1 lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~p~i~~~~~~~~ 66 (330)
T cd05586 1 IGKGTFGQVYQVRKK------DTRRIYAMKVLSKKEIVAKKEVAHTI--------GERNILVRTLLDESPFIVGLKFSFQ 66 (330)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEEeHHHHhhhhHHHHHH--------HHHHHHHHhccCCCCcCcceEEEEe
Confidence 799999999998863 5688999999876432221 111222 355565554 6999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~ 142 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIALCDFGL 142 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEecCCc
Confidence 99999999999986 9998887 345688999999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
++....... ......||+.|+|||++.+. .++..+|+|+.|++ .+.+++|+.
T Consensus 143 a~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvi-------l~elltG~~ 195 (330)
T cd05586 143 SKANLTDNK-----------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVL-------VFEMCCGWS 195 (330)
T ss_pred CcCCCCCCC-----------CccCccCCccccCHHHHcCCCCCCCccceeccccE-------EEEeccCCC
Confidence 975331100 01123489999999988654 57889999999988 556666754
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.3e-25 Score=253.23 Aligned_cols=192 Identities=15% Similarity=0.176 Sum_probs=154.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||+|..+. ....+..+|+|.++.... ......+. +|+.+|+.++||||++++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~---~~~~~~~vaik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 72 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKL---PSKRELPVAIHTLRAGCS-DKQRRGFL--------AEALTLGQFDHSNIVRLE 72 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEec---CCCceeeEEEEecCCCCC-HHHHHHHH--------HHHHHHhcCCCCCcCeEE
Confidence 479999999999999999886432 123567899999875422 22223344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++..++||||+++ +|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++.++ .+|++
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~--~~~l~ 149 (266)
T cd05064 73 GVITRGNTMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL--VCKIS 149 (266)
T ss_pred EEEecCCCcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC--cEEEC
Confidence 999999999999999997 999998743 34578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||.+......... . .....++..|+|||++.+..++...|+|+.|++
T Consensus 150 dfg~~~~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 197 (266)
T cd05064 150 GFRRLQEDKSEAIY----T------TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIV 197 (266)
T ss_pred CCcccccccccchh----c------ccCCCCceeecCHHHHhhCCccchhHHHHHHHH
Confidence 99987653210000 0 011124567999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-24 Score=261.52 Aligned_cols=231 Identities=15% Similarity=0.201 Sum_probs=189.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
...+.+.||.|.||+|++|+.+. ++ +....||||.++.+ ...+...+|| .|+.||.+++||||++|.|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~-pg--kre~~VAIKTLK~G-ytekqrrdFL--------~EAsIMGQFdHPNIIrLEG 697 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKL-PG--KREITVAIKTLKAG-YTEKQRRDFL--------SEASIMGQFDHPNIIRLEG 697 (996)
T ss_pred heEEEEEEecccccceecccccC-CC--CcceeEEEeeeccC-ccHHHHhhhh--------hhhhhcccCCCCcEEEEEE
Confidence 34678999999999999999753 22 56688999999876 3444556777 4999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+......+.||.|||++ +|+.+|+.+. +.|+..++.-+++.|+.||+||-+.++|||||...|||++.+. .+|++|
T Consensus 698 VVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL--vCKVsD 774 (996)
T KOG0196|consen 698 VVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL--VCKVSD 774 (996)
T ss_pred EEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce--EEEecc
Confidence 99999999999999996 9999999654 5588888889999999999999999999999999999999999 899999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCccce
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFH 401 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~ 401 (1566)
||++|........ ..+.. +-.-...|.|||.+....+++..|+|+.|.+ ++..-.+.-|+|+|++..
T Consensus 775 FGLSRvledd~~~--~ytt~------GGKIPiRWTAPEAIa~RKFTsASDVWSyGIV-----mWEVmSyGERPYWdmSNQ 841 (996)
T KOG0196|consen 775 FGLSRVLEDDPEA--AYTTL------GGKIPIRWTAPEAIAYRKFTSASDVWSYGIV-----MWEVMSYGERPYWDMSNQ 841 (996)
T ss_pred ccceeecccCCCc--ccccc------CCccceeecChhHhhhcccCchhhccccceE-----EEEecccCCCcccccchH
Confidence 9999966532210 00000 0011345899999999999999999999988 777778888999999999
Q ss_pred eecceeE-eeccCCCCCCCcc
Q 000399 402 MVMPWVI-DFSTKPDENFDSG 421 (1566)
Q Consensus 402 pv~pwv~-d~~~~~~~~~~~~ 421 (1566)
.|+--|. +|.-.++..+|..
T Consensus 842 dVIkaIe~gyRLPpPmDCP~a 862 (996)
T KOG0196|consen 842 DVIKAIEQGYRLPPPMDCPAA 862 (996)
T ss_pred HHHHHHHhccCCCCCCCCcHH
Confidence 9998777 6766655555544
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.5e-24 Score=248.13 Aligned_cols=212 Identities=16% Similarity=0.207 Sum_probs=182.8
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccc-ccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI-NCV 1366 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg-~~i 1366 (1566)
|-+--+| +++||+|..|+|||..+. ++.+|.+|.+-|++++.||...++.|+|. |-+||+||.+.+ .|.
T Consensus 63 fiaRknW-----iv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSD----Dm~iKlW~we~~wa~~ 133 (794)
T KOG0276|consen 63 FIARKNW-----IVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSD----DMTIKLWDWENEWACE 133 (794)
T ss_pred eeeccce-----EEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCC----ccEEEEeeccCceeee
Confidence 3344566 999999999999999987 89999999999999999999999999998 999999999754 899
Q ss_pred cccccccccccceEEeecCC-ceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccc
Q 000399 1367 SGYYGHEEVVNDICVLSSSG-RIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1443 (1566)
Q Consensus 1367 ~tl~gH~~~V~sVafsp~g~-~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1443 (1566)
++|+||+..|.+|+|+|... .+||+ |+|||+|.+.+..+..++++| .
T Consensus 134 qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gH------------------------------e 183 (794)
T KOG0276|consen 134 QTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGH------------------------------E 183 (794)
T ss_pred eEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeecc------------------------------c
Confidence 99999999999999999765 67887 999999999888888888765 6
Q ss_pred cccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccc
Q 000399 1444 SGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1444 ~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spd 1523 (1566)
.+|++|.|=+. +|-.+++||+.|.+|++||.++.+|+.++.|| +..|+.++|+|.-
T Consensus 184 kGVN~Vdyy~~--------gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGH------t~Nvs~v~fhp~l---------- 239 (794)
T KOG0276|consen 184 KGVNCVDYYTG--------GDKPYLISGADDLTIKVWDYQTKSCVQTLEGH------TNNVSFVFFHPEL---------- 239 (794)
T ss_pred cCcceEEeccC--------CCcceEEecCCCceEEEeecchHHHHHHhhcc------cccceEEEecCCC----------
Confidence 77889888775 35579999999999999999999999999987 5566778887654
Q ss_pred hhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1524 PSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1524 g~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
.+|+|||+||++|||+..|-+...++.---..|.|++..+
T Consensus 240 -piiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k 279 (794)
T KOG0276|consen 240 -PIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHK 279 (794)
T ss_pred -cEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecC
Confidence 4899999999999999998887777665556667766544
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.6e-24 Score=266.95 Aligned_cols=219 Identities=16% Similarity=0.157 Sum_probs=173.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+.+..+.||+|+||+||+|+- +.....++...||||.++.. .+.+...+|. ||+++|..++|||||+|+|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~-~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~--------REaeLla~l~H~nIVrLlG 556 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEA-YGLLPGQDEQLVAVKALKDK-AENQARQDFR--------REAELLAELQHPNIVRLLG 556 (774)
T ss_pred heeehhhhcCchhhhhhhhhc-cCCCCCccceehhHhhhccc-ccHHHHHHHH--------HHHHHHHhccCCCeEEEEE
Confidence 567789999999999999984 11122356788999999875 3344455666 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
++..++.+|||+|||.. +|.++|+-+. ..+++..+...|+.||+.||.||-++.+|||||..+|+||
T Consensus 557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV 636 (774)
T ss_pred EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee
Confidence 99999999999999995 9999998421 1226777888999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHh
Q 000399 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
.++. .|||+|||++|..=..+++....... -...||+||-+...+|+...|+|+.|++ |+.+-.
T Consensus 637 ge~l--~VKIsDfGLsRdiYssDYYk~~~~t~---------lPIRWMppEsIly~kFTteSDVWs~GVv-----LWEIFs 700 (774)
T KOG1026|consen 637 GENL--VVKISDFGLSRDIYSSDYYKVRGNTL---------LPIRWMPPESILYGKFTTESDVWSFGVV-----LWEIFS 700 (774)
T ss_pred ccce--EEEecccccchhhhhhhhhcccCCce---------eeeecCCHHHhhcCcccchhhhhhhhhh-----hhhhhc
Confidence 9999 89999999999644333322221221 2345999999999999999999999998 666666
Q ss_pred hcccccCCccceeeccee
Q 000399 390 LAGRRWGDYTFHMVMPWV 407 (1566)
Q Consensus 390 ~agrs~~dl~q~pv~pwv 407 (1566)
++-.++..++...|+..|
T Consensus 701 yG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 701 YGKQPYYGLSNQEVIECI 718 (774)
T ss_pred cccCcccccchHHHHHHH
Confidence 666666666665555443
|
|
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-24 Score=254.71 Aligned_cols=198 Identities=16% Similarity=0.128 Sum_probs=161.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.|+..+.||+|+||.||++.+. .+++.+|+|.+.+....... ...++ +|+.+|+.++|+||+.++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGESMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEc------CCCceEEEEEEehhhccchHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 3778899999999999988863 57889999998764332221 12233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+.+.+|+||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~--~~~l~ 144 (285)
T cd05630 67 YAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999986 999988654444588889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++....... . .....|+..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 Dfg~~~~~~~~~------~------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~-------l~~l~~g~~P 200 (285)
T cd05630 145 DLGLAVHVPEGQ------T------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL-------LYEMIAGQSP 200 (285)
T ss_pred eccceeecCCCc------c------ccCCCCCccccChHHHcCCCCCCccccHHHHHH-------HHHHHhCCCC
Confidence 999987533100 0 012248899999999998889999999999987 5666677764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.89 E-value=2e-24 Score=263.22 Aligned_cols=203 Identities=17% Similarity=0.134 Sum_probs=156.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|+..- .....++..||||+++.... ......+. +|+.+|+.+ +||||++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~-~~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~Ei~il~~l~~HpnIv~ 103 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYG-LFKSDAAMTVAVKMLKPSAH-LTEREALM--------SELKVLSYLGNHINIVN 103 (375)
T ss_pred hHHeehhheecCCccceEEEEEEec-cccCccceeEEEEeccCCcC-cHHHHHHH--------HHHHHHHHhcCCcceee
Confidence 3479999999999999999876310 11124567899999864322 12222333 699999999 8999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcc------------------------------------------------
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPN------------------------------------------------ 270 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~------------------------------------------------ 270 (1566)
+++++.+.+..++||||+++ +|.++++....
T Consensus 104 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (375)
T cd05104 104 LLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKA 183 (375)
T ss_pred eeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccc
Confidence 99999999999999999996 99988863211
Q ss_pred -------------------------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 271 -------------------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 271 -------------------------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
..++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a 261 (375)
T cd05104 184 DKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLA 261 (375)
T ss_pred ccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccc
Confidence 1356667788999999999999999999999999999999887 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+......... ......++..|+|||++.+..++...|+|+.|++ .+..++
T Consensus 262 ~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~-------l~ellt 311 (375)
T cd05104 262 RDIRNDSNYV---------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIL-------LWEIFS 311 (375)
T ss_pred eeccCccccc---------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHH-------HHHHHh
Confidence 8644211100 0112235667999999998899999999999987 555555
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.9e-23 Score=231.15 Aligned_cols=186 Identities=22% Similarity=0.364 Sum_probs=168.0
Q ss_pred eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEE
Q 000399 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLH 1396 (1566)
Q Consensus 1319 ~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIk 1396 (1566)
..+.+.||.+.|+||++.|-+..|+|||. |+||+|||+++|+...++.||...|..|++++...++.|+ |+.|+
T Consensus 143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~----DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VK 218 (460)
T KOG0285|consen 143 LYRVISGHLGWVRSVAVDPGNEWFATGSA----DRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVK 218 (460)
T ss_pred ehhhhhhccceEEEEeeCCCceeEEecCC----CceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeE
Confidence 45788999999999999999999999998 9999999999999999999999999999999999999877 99999
Q ss_pred EeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCce
Q 000399 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1566)
Q Consensus 1397 LWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~Dgt 1476 (1566)
.||++.++.++.+-+| -++|.+++.+|. -+.+++|+.|.+
T Consensus 219 CwDLe~nkvIR~YhGH------------------------------lS~V~~L~lhPT----------ldvl~t~grDst 258 (460)
T KOG0285|consen 219 CWDLEYNKVIRHYHGH------------------------------LSGVYCLDLHPT----------LDVLVTGGRDST 258 (460)
T ss_pred EEechhhhhHHHhccc------------------------------cceeEEEecccc----------ceeEEecCCcce
Confidence 9999999999877654 567888888887 679999999999
Q ss_pred EEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCce
Q 000399 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1566)
Q Consensus 1477 IrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~ 1556 (1566)
+|+||+|+...++++.|| ...|.+|.+.+.+ ..++|||.|++|++||++.|+-..++..|...
T Consensus 259 ~RvWDiRtr~~V~~l~GH------~~~V~~V~~~~~d-----------pqvit~S~D~tvrlWDl~agkt~~tlt~hkks 321 (460)
T KOG0285|consen 259 IRVWDIRTRASVHVLSGH------TNPVASVMCQPTD-----------PQVITGSHDSTVRLWDLRAGKTMITLTHHKKS 321 (460)
T ss_pred EEEeeecccceEEEecCC------CCcceeEEeecCC-----------CceEEecCCceEEEeeeccCceeEeeecccce
Confidence 999999999999999988 4456666665433 36899999999999999999999999999999
Q ss_pred eeEeeeecc
Q 000399 1557 VTKVRIISK 1565 (1566)
Q Consensus 1557 V~~Vafspd 1565 (1566)
|++++.+|+
T Consensus 322 vral~lhP~ 330 (460)
T KOG0285|consen 322 VRALCLHPK 330 (460)
T ss_pred eeEEecCCc
Confidence 999999985
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-24 Score=255.72 Aligned_cols=195 Identities=15% Similarity=0.222 Sum_probs=163.1
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc---CC
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HP 235 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~---Hp 235 (1566)
....+|..++.+|+|+||.|++|.++ ++...|+||.+.+++.-.....+-.+ +| +.-.||+||..++ |+
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K------~n~~eVViK~I~KeRIL~DtWvrDrk-LG-tVp~EIqIla~l~~~sH~ 629 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHK------ENNYEVVIKMIFKERILVDTWVRDRK-LG-TVPSEIQILATLNKHSHE 629 (772)
T ss_pred cccccceeeeeccccccceEEEeeec------ccceEEEeeehhhhhhhhhhhhcccc-cC-ccchhHHHHHHhhhcCcc
Confidence 34557999999999999999999985 56888999999988654433322221 22 2346999999997 99
Q ss_pred CcccccccccccCceeeeccCCc-c-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 236 NVAPVLGLLKTSGLITSVIPKTP-Y-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 236 NIV~l~~~~~~~~~l~LV~E~~~-g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
||++++++|++++++||+||--. | +|+++|.+.+ .++|.+++.|++||+.|+++||++||||||||-+|+.++.+|
T Consensus 630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred chhhhhheeecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence 99999999999999999999765 5 9999998644 489999999999999999999999999999999999999999
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhh-cccccccccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGEL 378 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~-~~d~Ws~G~i 378 (1566)
-+||+|||.|.+.+.. + ...++||..|.|||++.+..|.. .-|+|..|.+
T Consensus 708 --~~klidfgsaa~~ksg--------p-----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgil 758 (772)
T KOG1152|consen 708 --FVKLIDFGSAAYTKSG--------P-----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGIL 758 (772)
T ss_pred --eEEEeeccchhhhcCC--------C-----cceeeeeccccchhhhCCCccCCCcchhhhhhhe
Confidence 6999999999875521 1 12346999999999999999865 6689999976
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-24 Score=253.45 Aligned_cols=192 Identities=15% Similarity=0.084 Sum_probs=155.3
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccCc
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~~ 249 (1566)
||+|+||.||+++++ .++..+|+|.+.+............ ..|+++|+.++||||+++++++.++..
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~-------~~E~~il~~l~hp~i~~~~~~~~~~~~ 67 (277)
T cd05607 1 LGKGGFGEVCAVQVK------NTGKMYACKKLDKKRLKKKSGEKMA-------LLEKEILEKVNSPFIVNLAYAFESKTH 67 (277)
T ss_pred CCCCCceEEEEEEEc------cCCcEEEEEEEcHHHhhcchhhHHH-------HHHHHHHHhcCCCcEEEEEEEEecCCe
Confidence 799999999988753 4688999999875433222111111 258999999999999999999999999
Q ss_pred eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcc
Q 000399 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 250 l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~ 328 (1566)
+|+||||+++ +|.+++.......++...+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||++...
T Consensus 68 ~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~~~ 145 (277)
T cd05607 68 LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAVEL 145 (277)
T ss_pred EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC--CEEEeeceeeeec
Confidence 9999999987 998888654444577888889999999999999999999999999999999988 7999999998754
Q ss_pred ccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 329 SIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..... .....|+..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 146 ~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~-------l~el~~g~~p 193 (277)
T cd05607 146 KDGKT------------ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCS-------IYEMVAGRTP 193 (277)
T ss_pred CCCce------------eeccCCCCCccCHHHHccCCCCCchhHHHHHHH-------HHHHHhCCCC
Confidence 32100 112247889999999988889999999999987 6777778754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-24 Score=260.18 Aligned_cols=195 Identities=16% Similarity=0.192 Sum_probs=160.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||++.+. .++..+|+|.+.... ......++. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCcccce
Confidence 358999999999999999998863 467889999876532 112222333 69999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhc-cccCCCccCCCccccccchhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++|.+++.+|+||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--~~k 144 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 144 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--CEE
Confidence 9999999999999999986 99999973 34578888899999999999999985 799999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+|||+++..... ......|+..|+|||++.+..++...|+|+.|++ .+..+.|+.
T Consensus 145 L~Dfg~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i-------l~~l~~g~~ 200 (333)
T cd06650 145 LCDFGVSGQLIDS-------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS-------LVEMAIGRY 200 (333)
T ss_pred EeeCCcchhhhhh-------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHH-------HHHHHHCCC
Confidence 9999998754310 0112347889999999998888999999999987 666677764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-24 Score=276.28 Aligned_cols=217 Identities=18% Similarity=0.169 Sum_probs=178.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+.++.+.||+|+||+||+|.-.-.++... ...||||.+.+. .+.+...+|++ |..+|++++|||||+++|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~-~~~vaiK~l~~~-~~~~~~~~Fl~--------Ea~~m~~f~HpNiv~liG 762 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVS-PIQVAVKSLKRL-SSEQEVSDFLK--------EALLMSKFDHPNIVSLIG 762 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCcc-ceEEEEEecccc-CCHHHHHHHHH--------HHHHHhcCCCcceeeEEE
Confidence 56788999999999999987543233322 556899998765 45566777885 999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc-----ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP-----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~-----~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++.+....+|++|||.| +|..+|+..+ ...++..+...++.||++|++||+++++|||||..+|+||+... .
T Consensus 763 v~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r--~ 840 (1025)
T KOG1095|consen 763 VCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR--V 840 (1025)
T ss_pred eecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC--c
Confidence 99999999999999997 9999999642 23477888999999999999999999999999999999999998 8
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccC
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~ 396 (1566)
+||+|||+||..-..+.+......+ -..-|||||.+....++.++|+|+.|++ |+.+-.++..+|.
T Consensus 841 VKIaDFGlArDiy~~~yyr~~~~a~---------lPvkWm~PEsl~d~iFtskSDvWsFGVl-----lWEifslG~~PY~ 906 (1025)
T KOG1095|consen 841 VKIADFGLARDIYDKDYYRKHGEAM---------LPVKWMPPESLKDGIFTSKSDVWSFGVL-----LWEIFSLGATPYP 906 (1025)
T ss_pred EEEcccchhHhhhhchheeccCccc---------cceecCCHHHHhhcccccccchhhhHHH-----HHHHHhCCCCCCC
Confidence 9999999999544322222111111 2345999999999999999999999998 8888888888888
Q ss_pred Cccceeecc
Q 000399 397 DYTFHMVMP 405 (1566)
Q Consensus 397 dl~q~pv~p 405 (1566)
+.++..|+-
T Consensus 907 ~~~n~~v~~ 915 (1025)
T KOG1095|consen 907 SRSNFEVLL 915 (1025)
T ss_pred CcchHHHHH
Confidence 888877775
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.3e-25 Score=255.16 Aligned_cols=199 Identities=18% Similarity=0.216 Sum_probs=172.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+++++..||-|+||.|-+++.+ .....+|+|++++..+......+.+. .|-+||..++.|.||+|
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~------~~~~~fAlKilkK~hIVdtkQqeHv~-------sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVN------SQKATFALKILKKKHIVDTKQQEHVF-------SERNIMMECRSDFIVRL 485 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEec------ccchHHHHHHHhHhhccchhHHHHHH-------hHHHHHHhcCchHHHHH
Confidence 457889999999999999987642 23446999999988776665555553 79999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
|-.|.++.++||.||-|-| .|..+|+ .++.|.+..+++|+..++.|++|||++|||+|||||+|++++.+| .+||
T Consensus 486 YrTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G--y~KL 561 (732)
T KOG0614|consen 486 YRTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG--YLKL 561 (732)
T ss_pred HHHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC--ceEE
Confidence 9999999999999999876 9999998 567799999999999999999999999999999999999999999 5999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
.|||+|+......+ + -+++|||.|.|||++..+..+..+|.|+.|.+ .++.+.|+++
T Consensus 562 VDFGFAKki~~g~K-----T-------wTFcGTpEYVAPEIILnKGHD~avDyWaLGIl-------i~ELL~G~pP 618 (732)
T KOG0614|consen 562 VDFGFAKKIGSGRK-----T-------WTFCGTPEYVAPEIILNKGHDRAVDYWALGIL-------IYELLTGSPP 618 (732)
T ss_pred eehhhHHHhccCCc-----e-------eeecCCcccccchhhhccCcchhhHHHHHHHH-------HHHHHcCCCC
Confidence 99999997663211 1 13469999999999999999999999999965 7888888874
|
|
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.1e-24 Score=252.72 Aligned_cols=198 Identities=16% Similarity=0.112 Sum_probs=161.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc-cchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.|+..+.||+|+||+||+|.+. .+++.+|+|.+.+........ ..+. +|+++|+.++|+||++++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKRLEKKRIKKRKGESMAL--------NEKQILEKVNSQFVVNLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEC------CCCcEEEEEEeehhhhhhhhHHHHHH--------HHHHHHHHcCCcCceeEE
Confidence 3778899999999999988763 568899999987653332221 2223 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+..++..|+||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~--~~kl~ 144 (285)
T cd05632 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC--CEEEe
Confidence 999999999999999997 898888644444688999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++...... . .....|+..|+|||++.+..++...|.|+.|++ .+..+.|+.+
T Consensus 145 Dfg~~~~~~~~~------~------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~-------l~~l~~g~~P 200 (285)
T cd05632 145 DLGLAVKIPEGE------S------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCL-------IYEMIEGQSP 200 (285)
T ss_pred cCCcceecCCCC------c------ccCCCCCcCccChHHhcCCCCCcccchHHHHHH-------HHHHHhCCCC
Confidence 999987533100 0 112348899999999988889999999999987 5556667654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-23 Score=260.95 Aligned_cols=189 Identities=17% Similarity=0.062 Sum_probs=124.7
Q ss_pred hhcccccceeeeecchhhHHHHHhhhc----------cCCcchhhccccceeeecccccccccchhhhc------CCCCC
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFL----------SGCLEDCVLGSLNLLIEGKASGQESKNFLRLI------GVPSF 223 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~----------~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~------g~~~~ 223 (1566)
..++|++.++||+|+||+||+|...-. ......++.||||.+..... ....+|+++. ....+
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 356899999999999999998753100 01123457799999864321 1112222100 00112
Q ss_pred CCCCCCCcccCCC-----cccccccccc--------cCceeeeccCCcc-chhhhhccCcc-------------------
Q 000399 224 DESSVPGCLRHPN-----VAPVLGLLKT--------SGLITSVIPKTPY-TLENILQFSPN------------------- 270 (1566)
Q Consensus 224 rEi~iL~~l~HpN-----IV~l~~~~~~--------~~~l~LV~E~~~g-sL~~~l~~~~~------------------- 270 (1566)
.|+.++.+++|.| +++++++|.. .+..+|||||+++ +|.++++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 3555566665554 4677777653 3568999999997 99998863211
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeec
Q 000399 271 ---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347 (1566)
Q Consensus 271 ---~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~ 347 (1566)
..++...++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++....... ....
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~~~~~----~~~~------ 368 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG--QVKIIDFGAAVDMCTGIN----FNPL------ 368 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC--cEEEEeCcCccccccCCc----cCcc------
Confidence 0123445778999999999999999999999999999999988 799999999975432100 0000
Q ss_pred CCccccccccccccc
Q 000399 348 GCSSQGLYADLKLSQ 362 (1566)
Q Consensus 348 ~~~gt~~Y~APE~l~ 362 (1566)
...+++.|+|||++.
T Consensus 369 ~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 369 YGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCCcceeChhhhc
Confidence 012467788888763
|
|
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.9e-24 Score=271.11 Aligned_cols=203 Identities=15% Similarity=0.113 Sum_probs=150.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccc--------------eeeecccccccccchhhhcCCCCCCC
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLN--------------LLIEGKASGQESKNFLRLIGVPSFDE 225 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK--------------~l~~~~~~~~~~~~~l~~~g~~~~rE 225 (1566)
..++|++++.||+|+||+||+|..+. ..+...++| .+.+...........+ .+|
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~-------~~E 213 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRA-----STEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQL-------ENE 213 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEec-----cchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHH-------HHH
Confidence 35689999999999999999765321 111111111 1111101111111112 269
Q ss_pred CCCCCcccCCCcccccccccccCceeeeccCCccchhhhhccCc---ccccchhHHHHHHHHHHHHHHHHhhccccCCCc
Q 000399 226 SSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1566)
Q Consensus 226 i~iL~~l~HpNIV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~---~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDL 302 (1566)
+.+|+.++|||||++++++...+..|+|+|++.++|.+++.... ......+.++.++.||+.||.|||++|||||||
T Consensus 214 i~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDL 293 (501)
T PHA03210 214 ILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDI 293 (501)
T ss_pred HHHHHhCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 99999999999999999999999999999999988888775321 122345677889999999999999999999999
Q ss_pred cCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCch
Q 000399 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 303 Kp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfe 382 (1566)
||+|||++.++ .+||+|||+++....... ....+..||..|+|||++.+..|+..+|+|+.|++
T Consensus 294 KP~NILl~~~~--~vkL~DFGla~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi---- 357 (501)
T PHA03210 294 KLENIFLNCDG--KIVLGDFGTAMPFEKERE----------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI---- 357 (501)
T ss_pred CHHHEEECCCC--CEEEEeCCCceecCcccc----------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHH----
Confidence 99999999998 799999999986442110 01123458999999999999999999999999988
Q ss_pred hhhHHHhhccc
Q 000399 383 YLLFLNKLAGR 393 (1566)
Q Consensus 383 yL~~ln~~agr 393 (1566)
++..+.|.
T Consensus 358 ---l~ell~~~ 365 (501)
T PHA03210 358 ---LLDMLSHD 365 (501)
T ss_pred ---HHHHHHCC
Confidence 56666553
|
|
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-24 Score=268.53 Aligned_cols=195 Identities=15% Similarity=0.183 Sum_probs=152.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCc------ccC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC------LRH 234 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~------l~H 234 (1566)
.++|++++.||+|+||+||+|.+. ..+..||||++........ +.. +|+.+++. ..|
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~------~~~~~vAvK~i~~~~~~~~---~~~--------~e~~~l~~l~~~~~~~~ 190 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDR------KRKEYCAVKIVRNVPKYTR---DAK--------IEIQFMEKVRQADPADR 190 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEc------CCCeEEEEEEEecchhhHH---HHH--------HHHHHHHHHhhcCcccC
Confidence 358999999999999999998863 4678899999864211111 111 24444433 446
Q ss_pred CCccccccccccc-CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCcccccc
Q 000399 235 PNVAPVLGLLKTS-GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 235 pNIV~l~~~~~~~-~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~ 312 (1566)
++|++++++|... ..+|+|||+++++|.+++.. .+.+++..++.++.||+.||.|||+ .|||||||||+|||++.+
T Consensus 191 ~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 191 FPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred cceeeeEEEEEcCCceEEEEEeccCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 6799999988764 57899999998899998873 4568899999999999999999998 599999999999999876
Q ss_pred ch--------------hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 313 CW--------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 313 ~~--------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+. ..+||+|||.+..... . .....||+.|+|||++.+..|+..+|+|+.|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~--------~------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvi 334 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERH--------S------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCI 334 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCcc--------c------cccccCCccccCcHHhhcCCCCcHHHHHHHHHH
Confidence 52 1489999998864221 0 112358999999999999999999999999988
Q ss_pred CCchhhhHHHhhccccc
Q 000399 379 SNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 379 snfeyL~~ln~~agrs~ 395 (1566)
++..+.|+.+
T Consensus 335 -------l~elltG~~p 344 (467)
T PTZ00284 335 -------IYELYTGKLL 344 (467)
T ss_pred -------HHHHHhCCCC
Confidence 7778888764
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-24 Score=267.97 Aligned_cols=184 Identities=20% Similarity=0.102 Sum_probs=153.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
...|.+.+.||+|+||.||+|.+. ..+..||||..... .+. +|+++|++++|||||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~------~~~~~vavK~~~~~--------~~~--------~E~~iL~~L~HpnIv~l 225 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHP------DYPQRVVVKAGWYA--------SSV--------HEARLLRRLSHPAVLAL 225 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEEC------CCCCEEEEeccccc--------CHH--------HHHHHHHHCCCCCCCcE
Confidence 347999999999999999999863 45788999963221 122 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++...+..++|||++.++|.+++... ...++...++.++.||+.||.|||++||+||||||+||||+.++ .+||+
T Consensus 226 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~--~vkL~ 302 (461)
T PHA03211 226 LDVRVVGGLTCLVLPKYRSDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE--DICLG 302 (461)
T ss_pred EEEEEECCEEEEEEEccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC--CEEEc
Confidence 9999999999999999999999988642 23578899999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++........ .......||..|+|||++.+..++..+|+|+.|++
T Consensus 303 DFGla~~~~~~~~~---------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGvi 351 (461)
T PHA03211 303 DFGAACFARGSWST---------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLV 351 (461)
T ss_pred ccCCceeccccccc---------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHH
Confidence 99999864421000 01123458999999999999899999999999987
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-24 Score=272.12 Aligned_cols=203 Identities=17% Similarity=0.171 Sum_probs=153.7
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCc
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNI 237 (1566)
++-..+|+.++.||+||||.||++++++ +|+.||||+|.-.. ......+.+ ||+.+|.+|+||||
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKl------DGr~YAIKKIpl~~-s~~~~skI~--------rEVk~LArLnHpNV 539 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKL------DGREYAIKKIPLKA-SDKLYSKIL--------REVKLLARLNHPNV 539 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecc------cchhhhhhhccCch-HHHHHHHHH--------HHHHHHhhcCCcce
Confidence 4456789999999999999999999874 89999999998653 333333333 69999999999999
Q ss_pred ccccccccc-------------------------------------------------------c---------------
Q 000399 238 APVLGLLKT-------------------------------------------------------S--------------- 247 (1566)
Q Consensus 238 V~l~~~~~~-------------------------------------------------------~--------------- 247 (1566)
|++|..+.+ .
T Consensus 540 VRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e 619 (1351)
T KOG1035|consen 540 VRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEE 619 (1351)
T ss_pred eeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcc
Confidence 997654320 0
Q ss_pred -------------------------------------------------CceeeeccCCcc-chhhhhccCcccccchhH
Q 000399 248 -------------------------------------------------GLITSVIPKTPY-TLENILQFSPNALKSEWH 277 (1566)
Q Consensus 248 -------------------------------------------------~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~ 277 (1566)
..+||-||||+. +|.++++++.... ....
T Consensus 620 ~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~ 698 (1351)
T KOG1035|consen 620 NDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDE 698 (1351)
T ss_pred cccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHH
Confidence 136888999998 6667776322111 3556
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcccc---ccccC---CCCCCceee-eecCCc
Q 000399 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI---ADWCT---IPTSPMIGC-CIEGCS 350 (1566)
Q Consensus 278 ~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~---~~~~~---~~~~~~~~~-~~~~~~ 350 (1566)
++.+++||+.||.|+|++|||||||||.||++++++ .|||.|||+|+.... ..... ......... ..++.+
T Consensus 699 ~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~--~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~V 776 (1351)
T KOG1035|consen 699 AWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRN--SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQV 776 (1351)
T ss_pred HHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCC--CeeecccccchhhhhhhhhHhhccCccccccCCCCccccccc
Confidence 788999999999999999999999999999999988 799999999997221 00000 000000011 345678
Q ss_pred ccccccccccccccc---hhhcccccccccc
Q 000399 351 SQGLYADLKLSQSMD---WHSQFNRWWRGEL 378 (1566)
Q Consensus 351 gt~~Y~APE~l~~~~---y~~~~d~Ws~G~i 378 (1566)
||..|+|||++.+.. |+.++|+++.|.|
T Consensus 777 GTalYvAPEll~~~~~~~Yn~KiDmYSLGIV 807 (1351)
T KOG1035|consen 777 GTALYVAPELLSDTSSNKYNSKIDMYSLGIV 807 (1351)
T ss_pred ceeeeecHHHhcccccccccchhhhHHHHHH
Confidence 999999999997655 9999999999988
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-24 Score=246.50 Aligned_cols=199 Identities=13% Similarity=0.109 Sum_probs=161.9
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++.+. .++..+|+|.+...... ...+.+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 65 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHV------NSDQKYAMKEIRLPKSS-SAVEDSR--------KEAVLLAKMKHPNIVAFKE 65 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEc------CCCceEEEEEEEcCcch-HHHHHHH--------HHHHHHHhCCCCCcceEEE
Confidence 5889999999999999998863 46788999998653221 2222333 5888999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+.+++.+|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++ .++|+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~--~~~l~d 143 (255)
T cd08219 66 SFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG--KVKLGD 143 (255)
T ss_pred EEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC--cEEEcc
Confidence 99999999999999986 999988754455678888999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccC
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~ 396 (1566)
||+++....... ......+++.|+|||++.+..++...|+|+.|++ .+.++.|+.+.
T Consensus 144 fg~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i-------~~~l~~g~~p~ 200 (255)
T cd08219 144 FGSARLLTSPGA-----------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCI-------LYELCTLKHPF 200 (255)
T ss_pred cCcceeeccccc-----------ccccccCCccccCHHHHccCCcCchhhhhhhchh-------heehhhccCCC
Confidence 999875432100 1123457888999999988889999999999987 55556676543
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.2e-24 Score=277.08 Aligned_cols=202 Identities=17% Similarity=0.165 Sum_probs=160.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||+|++. .++..+|+|.+............++ +|+.+|+.++|||||++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk------~tg~~vAlKvIk~~~l~e~~~~~~~--------~EI~IL~~L~HPNIVrl 77 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHK------RTQEFFCWKAISYRGLKEREKSQLV--------IEVNVMRELKHKNIVRY 77 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCeEEEEEEEeccccCHHHHHHHH--------HHHHHHHHcCCCCcCeE
Confidence 568999999999999999999863 4678899999876543333333344 59999999999999999
Q ss_pred cccccc--cCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhc-------cccCCCccCCCcc
Q 000399 241 LGLLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-------GIAHRSVCPSNVL 308 (1566)
Q Consensus 241 ~~~~~~--~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~-------gIiHrDLKp~NIL 308 (1566)
+++|.. ...+||||||+++ +|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+|||
T Consensus 78 ~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL 157 (1021)
T PTZ00266 78 IDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF 157 (1021)
T ss_pred EEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence 999854 4579999999996 999998742 224588999999999999999999984 4999999999999
Q ss_pred ccccc---------------hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccc
Q 000399 309 LTDSC---------------WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFN 371 (1566)
Q Consensus 309 l~~~~---------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d 371 (1566)
|+.+. ...+||+|||+++...... ....+.||+.|+|||++.+ ..++..+|
T Consensus 158 L~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------~~~s~vGTp~YmAPEvL~ge~~~~s~KSD 225 (1021)
T PTZ00266 158 LSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------MAHSCVGTPYYWSPELLLHETKSYDDKSD 225 (1021)
T ss_pred eecCccccccccccccccCCCCceEEccCCccccccccc------------cccccCCCccccCHHHHhccCCCCCchhH
Confidence 97531 1248999999998543110 1123568999999999854 45788999
Q ss_pred cccccccCCchhhhHHHhhccccc
Q 000399 372 RWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 372 ~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+.|+| ++.++.|+.+
T Consensus 226 VWSLG~I-------LYELLTGk~P 242 (1021)
T PTZ00266 226 MWALGCI-------IYELCSGKTP 242 (1021)
T ss_pred HHHHHHH-------HHHHHHCCCC
Confidence 9999988 6777778754
|
|
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.7e-24 Score=260.94 Aligned_cols=197 Identities=18% Similarity=0.148 Sum_probs=152.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~ 239 (1566)
.++|++++.||+|+||.||+|++.- .+....+..||||++..... ......++ +|+++|+++. |||||+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~Ei~~l~~l~~HpnIv~ 105 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYG-LSRSQPVMKVAVKMLKPTAR-SSEKQALM--------SELKIMTHLGPHLNIVN 105 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcc-cCCCCCceEEEEEecCCCCC-hHHHHHHH--------HHHHHHHhcCCCCCeee
Confidence 4579999999999999999887421 11123456799999865322 12223344 5999999996 999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCc-------------------------------------------------
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP------------------------------------------------- 269 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------------------------------------------- 269 (1566)
+++++.+.+.+|||||||++ +|.++|....
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
T cd05105 106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT 185 (400)
T ss_pred EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence 99999999999999999996 9998875321
Q ss_pred ---------------------------------------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccC
Q 000399 270 ---------------------------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1566)
Q Consensus 270 ---------------------------------------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp 304 (1566)
...++...+..++.||+.||.|||+++|+||||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp 265 (400)
T cd05105 186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA 265 (400)
T ss_pred cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 11356667788999999999999999999999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||++.++ .+||+|||+++......... ......++..|+|||++.+..++.+.|+|+.|++
T Consensus 266 ~Nill~~~~--~~kL~DfGla~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvi 328 (400)
T cd05105 266 RNVLLAQGK--IVKICDFGLARDIMHDSNYV---------SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGIL 328 (400)
T ss_pred HhEEEeCCC--EEEEEeCCcceecccccccc---------ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHH
Confidence 999999988 79999999998543211100 0112235677999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.88 E-value=6e-24 Score=247.84 Aligned_cols=197 Identities=19% Similarity=0.220 Sum_probs=158.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|++. .++..+|+|.+............+ .+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~------~~g~~~~~k~~~~~~~~~~~~~~~--------~~ei~~l~~l~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSA--------LREICLLKELKHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEEC------CCCcEEEEEEeecccccccCccch--------hHHHHHHHhcCCCCeeeHHH
Confidence 5889999999999999998863 568889999987543222211222 36999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++.+...+|+|+||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~--~~~l~df 143 (284)
T cd07839 67 VLHSDKKLTLVFEYCDQDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG--ELKLADF 143 (284)
T ss_pred HhccCCceEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC--cEEECcc
Confidence 99999999999999999998887632 34578999999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+++....... ......++..|+|||++.+. .++...|+|+.|++ .+.++.|+.
T Consensus 144 g~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i-------l~~l~tg~~ 198 (284)
T cd07839 144 GLARAFGIPVR-----------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI-------FAELANAGR 198 (284)
T ss_pred chhhccCCCCC-----------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHH-------HHHHHhcCC
Confidence 99985431100 01112367889999987654 46889999999987 666666653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-24 Score=246.57 Aligned_cols=204 Identities=14% Similarity=0.089 Sum_probs=162.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.+. .++..+|+|.+...........+.. ...+|+.++++++||||++++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~lk~~~~~~~~~~~~~~~~-----~~~~e~~~l~~l~~~~i~~~~ 70 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDV------DTGRELAVKQVPFDPDSPETKKEVN-----ALECEIQLLKNLQHERIVQYY 70 (263)
T ss_pred CcccccceecCCCceEEEEEEEc------CCCcEEEEEEEeecccchhhHHHHH-----HHHHHHHHHHhCCCCCeeeeE
Confidence 46899999999999999998752 5678899999875432221111110 012699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++.+++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||+.||+||||||+||+++.++ .++|+
T Consensus 71 ~~~~~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~--~~~l~ 146 (263)
T cd06625 71 GCLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG--NVKLG 146 (263)
T ss_pred EEEccCCeEEEEEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEe
Confidence 999999999999999987 99999873 34578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++.......... ......++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 147 dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~el~~g~~p 206 (263)
T cd06625 147 DFGASKRLQTICSSGT--------GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCT-------VVEMLTEKPP 206 (263)
T ss_pred ecccceeccccccccc--------cccCCCcCccccCcceeccCCCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 9999975432111100 0012247788999999998888899999999987 6667777654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=220.22 Aligned_cols=245 Identities=22% Similarity=0.299 Sum_probs=191.4
Q ss_pred cccCCCceec--cCCC-CCCCCCcccccccCccCCCCceEeee----eehhh-hhccCcceeeeecCcceEEEeeccCCC
Q 000399 1279 LMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKAS----ILSSI-RAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpd-g~~~~~~~LaSgS~D~~I~vWdl~~~----~l~tl-~gH~~~V~slafspd~~~LaSgS~~~~ 1350 (1566)
..+|.+.+|. ++|. |.. |||||.|+.|++|+..++ +...+ .+|+.+|+++||+|.|++|++||-
T Consensus 10 ~~gh~~r~W~~awhp~~g~i-----lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF--- 81 (312)
T KOG0645|consen 10 LSGHKDRVWSVAWHPGKGVI-----LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF--- 81 (312)
T ss_pred ecCCCCcEEEEEeccCCceE-----EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeec---
Confidence 3468888887 7887 777 999999999999999842 33333 489999999999999999999985
Q ss_pred cccceeeEEeccc--ccccccccccccccceEEeecCCceeec--cCcEEEeecCCC---cEEEEeecccccccc-----
Q 000399 1351 FKGTVQKWELTRI--NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG---KLLSVFAEQSMDSLH----- 1418 (1566)
Q Consensus 1351 ~D~tVrlWDl~tg--~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg---~~l~~l~~h~~~~~~----- 1418 (1566)
|.|+.||.-..+ +|+.+++||+..|.|++|+++|++||+| |++|.||.+..+ .++.++++|...+..
T Consensus 82 -D~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP 160 (312)
T KOG0645|consen 82 -DATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP 160 (312)
T ss_pred -cceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC
Confidence 999999987644 7899999999999999999999999988 999999999754 578888888765433
Q ss_pred ------cCCCCCcccccccCCCC----CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCcee
Q 000399 1419 ------GGSPSSSISKINTDQVG----MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1488 (1566)
Q Consensus 1419 ------~~~~~~~~~~~~~~~~~----~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l 1488 (1566)
+++.++.+++|...... ...+.+|++-|.+++|++. |..+++++.|++|+||-..+.
T Consensus 161 t~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~----------G~rl~s~sdD~tv~Iw~~~~~--- 227 (312)
T KOG0645|consen 161 TEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI----------GSRLVSCSDDGTVSIWRLYTD--- 227 (312)
T ss_pred CcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC----------CceEEEecCCcceEeeeeccC---
Confidence 34445555555433222 3445678888999999987 899999999999999987622
Q ss_pred eeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc------eeE-EeeccCceeeEee
Q 000399 1489 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN------VIA-SWRAHDGYVTKVR 1561 (1566)
Q Consensus 1489 ~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk------~l~-~l~gH~~~V~~Va 1561 (1566)
+.+ .|...++.+.+. + ..||||+.|+.|++|.-..+- .+. .-.+|+..|++|+
T Consensus 228 --~~~-----~~sr~~Y~v~W~-~------------~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~ 287 (312)
T KOG0645|consen 228 --LSG-----MHSRALYDVPWD-N------------GVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQ 287 (312)
T ss_pred --cch-----hcccceEeeeec-c------------cceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEE
Confidence 111 245666667665 2 279999999999999766431 122 2357999999999
Q ss_pred eecc
Q 000399 1562 IISK 1565 (1566)
Q Consensus 1562 fspd 1565 (1566)
|+|.
T Consensus 288 w~p~ 291 (312)
T KOG0645|consen 288 WNPK 291 (312)
T ss_pred EcCC
Confidence 9994
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.9e-24 Score=242.36 Aligned_cols=199 Identities=18% Similarity=0.181 Sum_probs=164.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|.+.+.||+|+||.||+|.++ .++..+++|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRK------ADKRVYAMKQIDLSKMNRREREEAI--------DEARVLAKLDSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEc------CCCcEEEEEEeehhhCCHHHHHHHH--------HHHHHHHhcCCCCeehhee
Confidence 4788999999999999998753 5688899999876544444444444 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++...+..|+||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~--~~~l~d 144 (256)
T cd08529 67 SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD--NVKIGD 144 (256)
T ss_pred eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC--CEEEcc
Confidence 99999999999999986 999999854445678888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... ......+++.|+|||++.+..++...|.|+.|++ .+..+.|+.+
T Consensus 145 f~~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 200 (256)
T cd08529 145 LGVAKLLSDNTN-----------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVV-------LYECCTGKHP 200 (256)
T ss_pred cccceeccCccc-----------hhhccccCccccCHHHhcCCCCCCccchHHHHHH-------HHHHHhCCCC
Confidence 999885442100 0112237788999999998888999999999987 6677777654
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-23 Score=219.89 Aligned_cols=244 Identities=14% Similarity=0.149 Sum_probs=182.3
Q ss_pred ccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccc--cccccccccccc
Q 000399 1300 FLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVV 1376 (1566)
Q Consensus 1300 ~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~--~i~tl~gH~~~V 1376 (1566)
+|+|+|.|-+|++|...+| +..+++-..+.|+.+.+.||+..||+|+. ..||+||+.+++ ++.+|.+|++.|
T Consensus 12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-----qhvRlyD~~S~np~Pv~t~e~h~kNV 86 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-----QHVRLYDLNSNNPNPVATFEGHTKNV 86 (311)
T ss_pred EEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-----CeeEEEEccCCCCCceeEEeccCCce
Confidence 4999999999999998877 88999977889999999999999999996 899999999875 588999999999
Q ss_pred cceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccch
Q 000399 1377 NDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1454 (1566)
Q Consensus 1377 ~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~ 1454 (1566)
++|.|..+|+++.+| ||++||||++.-.+-+.++... .+....-+.+...++..++.+.+..++....+..-..-|+
T Consensus 87 taVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~s-pVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe 165 (311)
T KOG0315|consen 87 TAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNS-PVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPE 165 (311)
T ss_pred EEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCC-CcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCC
Confidence 999999999999887 9999999999876666665432 2222222222333333333333333332222222222221
Q ss_pred ---hHHHhhhhhccceEEEEecCceEEEEEccCCc------eeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchh
Q 000399 1455 ---LYTCLHHIECVERLVVGIGNGSLRFIDINQGQ------KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1566)
Q Consensus 1455 ---~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~------~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~ 1525 (1566)
.+..++++|||..++++...|+..+|++-+.+ ++.+|+.|. +.+ ..+-+|||++
T Consensus 166 ~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~------~~i-----------l~C~lSPd~k 228 (311)
T KOG0315|consen 166 DDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHN------GHI-----------LRCLLSPDVK 228 (311)
T ss_pred CCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheeccc------ceE-----------EEEEECCCCc
Confidence 12234455669999999999999999998653 444455442 222 2344678889
Q ss_pred HHHhccCCCceeEEeeccC-ceeEEeeccCceeeEeeeeccC
Q 000399 1526 WIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1526 ~LaSGs~Dg~I~lWD~~sg-k~l~~l~gH~~~V~~VafspdG 1566 (1566)
+||++|+|.+++||++.+- +.-..+++|..+|..++||-||
T Consensus 229 ~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg 270 (311)
T KOG0315|consen 229 YLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADG 270 (311)
T ss_pred EEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCc
Confidence 9999999999999999987 6777889999999999999886
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.2e-24 Score=251.90 Aligned_cols=196 Identities=18% Similarity=0.186 Sum_probs=150.4
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
.++||+|+||.||+|+++ ...++..+|+|.+...... ..+. +|+.+|+.++||||+++++++..
T Consensus 6 g~~lG~G~~g~Vy~~~~~----~~~~~~~~a~k~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRK----DGKDEKEYALKQIEGTGIS----MSAC--------REIALLRELKHPNVIALQKVFLS 69 (317)
T ss_pred ceEeccCCCeeEEEEEec----CCCccceEEEEEecCCCCc----HHHH--------HHHHHHHhCCCCCeeeEEEEEec
Confidence 468999999999998742 1235678999987643211 1222 69999999999999999999853
Q ss_pred --cCceeeeccCCccchhhhhccC-------cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc----ccc
Q 000399 247 --SGLITSVIPKTPYTLENILQFS-------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 313 (1566)
Q Consensus 247 --~~~l~LV~E~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~----~~~ 313 (1566)
+..+|+||||++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+. .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 149 (317)
T cd07867 70 HSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred cCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCC
Confidence 5678999999999988887532 122467888899999999999999999999999999999994 444
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
.+||+|||+++......... .......+|+.|+|||++.+ ..++..+|+|+.|++ .+..+.|
T Consensus 150 --~~kl~DfG~a~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i-------l~el~tg 212 (317)
T cd07867 150 --RVKIADMGFARLFNSPLKPL--------ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI-------FAELLTS 212 (317)
T ss_pred --cEEEeeccceeccCCCcccc--------cccCcceecccccCcHHhcCCCccCcHHHHHhHHHH-------HHHHHhC
Confidence 79999999998644211100 01123458899999998876 457889999999988 7777778
Q ss_pred ccc
Q 000399 393 RRW 395 (1566)
Q Consensus 393 rs~ 395 (1566)
+.+
T Consensus 213 ~~~ 215 (317)
T cd07867 213 EPI 215 (317)
T ss_pred CCC
Confidence 653
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.1e-24 Score=247.03 Aligned_cols=206 Identities=14% Similarity=0.096 Sum_probs=160.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.+.+.||+|+||.||+|.+.. .....++..+|+|.+..... ......+. +|+++|+.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~ 73 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYH-LEPENDKELVAVKTLKETAS-NDARKDFE--------REAELLTNFQHENIVKF 73 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeecc-ccCcCCcceEEEEeecccCC-HHHHHHHH--------HHHHHHHhcCCCCchhe
Confidence 3579999999999999999987531 11124567899999865322 11223344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NI 307 (1566)
++++......++||||+++ +|.+++.... ...+++..+..++.|++.|+.|||++|++||||||+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~ni 153 (280)
T cd05049 74 YGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNC 153 (280)
T ss_pred eeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceE
Confidence 9999999999999999987 9999986421 23467778899999999999999999999999999999
Q ss_pred cccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHH
Q 000399 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 387 (1566)
Q Consensus 308 Ll~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~l 387 (1566)
+++.++ .+||+|||+++......... ......+++.|+|||++.+..++..+|+|+.|++ .+
T Consensus 154 li~~~~--~~kl~d~g~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~ 215 (280)
T cd05049 154 LVGYDL--VVKIGDFGMSRDVYTTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVV-------LW 215 (280)
T ss_pred EEcCCC--eEEECCcccceecccCccee---------cCCCCcccceecChhhhccCCcchhhhHHHHHHH-------HH
Confidence 999998 79999999997543211100 0112235678999999998899999999999987 55
Q ss_pred Hhhc-ccc
Q 000399 388 NKLA-GRR 394 (1566)
Q Consensus 388 n~~a-grs 394 (1566)
..++ |+.
T Consensus 216 e~~~~g~~ 223 (280)
T cd05049 216 EIFTYGKQ 223 (280)
T ss_pred HHHhcCCC
Confidence 5665 554
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-23 Score=246.36 Aligned_cols=199 Identities=20% Similarity=0.264 Sum_probs=160.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++ .++..+|+|.+....... ....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSK------LTGQLVALKEIRLEHEEG-APFTAI--------REASLLKDLKHANIVTL 68 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEc------CCCcEEEEEEEecccccC-CchhHH--------HHHHHHhhCCCcceeeE
Confidence 578999999999999999998863 467889999987543221 112222 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.+++..|+||||++++|.+++...+ ..+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~ 145 (291)
T cd07844 69 HDIIHTKKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC--CEEEC
Confidence 99999999999999999999999887433 3578888999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... . .....++..|+|||++.+ ..++..+|+|+.|++ .+..++|+.+
T Consensus 146 dfg~~~~~~~~~~-----~------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~~ 203 (291)
T cd07844 146 DFGLARAKSVPSK-----T------YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCI-------FYEMATGRPL 203 (291)
T ss_pred ccccccccCCCCc-----c------ccccccccccCCcHHhhcCcccCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 9999874321000 0 001125778999998865 457889999999987 6667777653
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-24 Score=246.77 Aligned_cols=196 Identities=21% Similarity=0.296 Sum_probs=163.1
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++++.||+|+||.||++++. .++..+|+|.+.............. +|+.+++.++||||++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNK------KNGQKVAVKIIDKSEIEEEEREENI--------REIKILRRLRHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEET------TTTEEEEEEEEESTTHHHHHHHHHH--------HHHHHHHHHTBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEEC------CCCeEEEEEEeccccccccccchhh--------hhhhcccccccccccccccc
Confidence 788999999999999999874 5677899999987644433322222 48899999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+......++||||+++ +|.+++. ....+++..+..++.||+.||.+||++||+||||||+||+++.++ .++|+||
T Consensus 67 ~~~~~~~~~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~--~~~l~Df 142 (260)
T PF00069_consen 67 FQDDNYLYIVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG--EVKLIDF 142 (260)
T ss_dssp EEESSEEEEEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS--EEEESSG
T ss_pred cccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc--ccccccc
Confidence 9999999999999998 9999998 456689999999999999999999999999999999999999888 6999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|.+...... .. ......+++.|+|||++. +..++...|+|+.|.+ .+.++.|+.+
T Consensus 143 g~~~~~~~~-------~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i-------l~~l~~~~~p 198 (260)
T PF00069_consen 143 GSSVKLSEN-------NE----NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGII-------LYELLTGKLP 198 (260)
T ss_dssp TTTEESTST-------TS----EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHH-------HHHHHHSSSS
T ss_pred ccccccccc-------cc----ccccccccccccccccccccccccccccccccccc-------cccccccccc
Confidence 998743100 00 112334788999999998 7888999999999987 6777777654
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.4e-24 Score=250.10 Aligned_cols=188 Identities=10% Similarity=0.009 Sum_probs=152.6
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc-
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT- 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~- 246 (1566)
..||+|++|.||+|.. ++..||||.+.+.........+.+. +|+.+|++++|||||++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--------NNKEVIIRTFKKFHKGHKVLIDITE-------NEIKNLRRIDSNNILKIYGFIIDI 90 (283)
T ss_pred eEEeeCCceEEEEEEE--------CCEEEEEEeccccccccHHHHHHHH-------HHHHHHHhcCCCCEEEEeeeEEec
Confidence 6799999999998773 6789999998764332222112222 69999999999999999999876
Q ss_pred ---cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhcC
Q 000399 247 ---SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 247 ---~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
...+++||||+++ +|.+++.. ...++......++.|++.||.|||+ .+++||||||+|||++.++ .+||+|
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~--~~kl~d 166 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY--KLKIIC 166 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC--cEEEcc
Confidence 3578999999997 99999974 3457788889999999999999998 5999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++..... . ....++..|+|||++.+ ..++.+.|+|+.|++ .+..++|+.+
T Consensus 167 fg~~~~~~~~--------~------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvi-------l~el~~g~~P 221 (283)
T PHA02988 167 HGLEKILSSP--------P------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVV-------LWEIFTGKIP 221 (283)
T ss_pred cchHhhhccc--------c------ccccCcccccCHHHhhhccccccchhhhhHHHHH-------HHHHHHCCCC
Confidence 9999854321 0 01237788999999976 678899999999988 7777788764
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.7e-24 Score=246.85 Aligned_cols=197 Identities=15% Similarity=0.081 Sum_probs=152.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++- ......+..+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~iv~~ 74 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKG-VVKDEPETRVAIKTVNEAA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEecc-CCCCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 4679999999999999999876421 0112345779999875432 112223344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcc--------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN--------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~--------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
++++......++||||+++ +|.++++.... ..++...+..++.|++.||.|||++|++||||||+||++++
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 75 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC
Confidence 9999999999999999996 99999864211 12455677889999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
++ .+||+|||+++.......... .....++..|+|||++.+..++...|+|+.|++
T Consensus 155 ~~--~~~l~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 210 (277)
T cd05062 155 DF--TVKIGDFGMTRDIYETDYYRK---------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 210 (277)
T ss_pred CC--CEEECCCCCccccCCcceeec---------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence 88 799999999985432111000 011235678999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-24 Score=247.63 Aligned_cols=194 Identities=22% Similarity=0.234 Sum_probs=162.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++.+.||+|+||.||++.+. .++..+|+|++.+....... ...+. +|+++|++++||||++++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHK------GSGKYYALKILSKAKIVKLKQVEHVL--------NEKRILQSIRHPFLVNLY 67 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCcccee
Confidence 6899999999999999988863 46888999998765432222 22233 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl~ 143 (290)
T cd05580 68 GSFQDDSNLYLVMEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIKIT 143 (290)
T ss_pred eEEEcCCeEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999965 99999974 35678999999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++..... .....+++.|+|||.+.+..++...|+|+.|++ .+..+.|+.+
T Consensus 144 dfg~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 197 (290)
T cd05580 144 DFGFAKRVKGR--------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGIL-------IYEMLAGYPP 197 (290)
T ss_pred eCCCccccCCC--------------CCCCCCCccccChhhhcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 99999864421 011237888999999988888889999999987 6777778764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-23 Score=249.57 Aligned_cols=204 Identities=18% Similarity=0.168 Sum_probs=154.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|.+.. ........+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~niv~~ 74 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKELREAT-SPKANKEIL--------DEAYVMASVDNPHVCRL 74 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEec--CCCccceeEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 3479999999999999999987421 111123348999886432 222223344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++... ..++|+||+++ +|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~-~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~--~~kl 150 (316)
T cd05108 75 LGICLTS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ--HVKI 150 (316)
T ss_pred EEEEcCC-CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC--cEEE
Confidence 9998765 57789999986 999999743 23467778889999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
+|||+++......... ...+..++..|+|||.+.+..++...|+|+.|++ .+..++ |+.+
T Consensus 151 ~DfG~a~~~~~~~~~~---------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~-------l~el~t~g~~p 211 (316)
T cd05108 151 TDFGLAKLLGADEKEY---------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT-------VWELMTFGSKP 211 (316)
T ss_pred ccccccccccCCCcce---------eccCCccceeecChHHhccCCCCchhhhHHHHHH-------HHHHHcCCCCC
Confidence 9999998654211100 0111224567999999998889999999999987 555554 5443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-23 Score=251.87 Aligned_cols=205 Identities=17% Similarity=0.169 Sum_probs=157.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|.+.- .+...+++.||+|++.... .......+. +|+.+++++ +||||+++
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~-~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~E~~~~~~l~~h~niv~~ 76 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFG-IEKSASCRTVAVKMLKEGA-TASEYKALM--------TELKILIHIGHHLNVVNL 76 (337)
T ss_pred HHhhhhcccccCcCceEEeccccc-cccccccceeeeeeccCCC-CHHHHHHHH--------HHHHHHHhhccCcchhhe
Confidence 589999999999999999987421 2223457889999986432 112222333 599999999 79999999
Q ss_pred cccccc-cCceeeeccCCcc-chhhhhccCcc------------------------------------------------
Q 000399 241 LGLLKT-SGLITSVIPKTPY-TLENILQFSPN------------------------------------------------ 270 (1566)
Q Consensus 241 ~~~~~~-~~~l~LV~E~~~g-sL~~~l~~~~~------------------------------------------------ 270 (1566)
++++.. ...++++|||+++ +|.+++.....
T Consensus 77 ~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (337)
T cd05054 77 LGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDV 156 (337)
T ss_pred eeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhc
Confidence 998865 4578999999997 99988853211
Q ss_pred -----------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCccccccccCCCCC
Q 000399 271 -----------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTS 339 (1566)
Q Consensus 271 -----------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~ 339 (1566)
..++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~--~vkL~DfG~a~~~~~~~~~~---- 230 (337)
T cd05054 157 EEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV---- 230 (337)
T ss_pred ccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC--cEEEeccccchhcccCcchh----
Confidence 2467777889999999999999999999999999999999988 79999999998643211100
Q ss_pred CceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 340 PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 340 ~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
......++..|+|||++.+..++...|+|+.|++ .+..+. |+.
T Consensus 231 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~-------l~el~t~g~~ 274 (337)
T cd05054 231 -----RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVL-------LWEIFSLGAS 274 (337)
T ss_pred -----hccCCCCCccccCcHHhcCCCCCccccHHHHHHH-------HHHHHHcCCC
Confidence 0112345677999999998899999999999987 555554 554
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.3e-24 Score=247.53 Aligned_cols=206 Identities=15% Similarity=0.128 Sum_probs=159.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+.. .+.......+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~~v~~K~~~~~~-~~~~~~~~~--------~ei~~l~~l~h~~i~~~ 73 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTG-PNERLSATSVAIKTLKENA-EPKVQQEFR--------QEAELMSDLQHPNIVCL 73 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEec-CCCCcceeeEEEEecccCC-CHHHHHHHH--------HHHHHHHhcCCcccceE
Confidence 4589999999999999999887532 1112345678999876432 111222333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcc--------------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN--------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~--------------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
++++...+..|++|||+++ +|.+++..... ..++...++.++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~ 153 (283)
T cd05048 74 LGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAAR 153 (283)
T ss_pred EEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccc
Confidence 9999999999999999986 99999874211 34677788899999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhh
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
||++++++ .+||+|||+++......... ......+++.|+|||.+.+..++...|+|+.|++
T Consensus 154 Nil~~~~~--~~~L~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~i------- 215 (283)
T cd05048 154 NCLVGEGL--TVKISDFGLSRDIYSADYYR---------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVV------- 215 (283)
T ss_pred eEEEcCCC--cEEECCCcceeecccccccc---------ccCCCcccccccCHHHhccCcCchhhhHHHHHHH-------
Confidence 99999988 79999999998543211000 1112236778999999988889999999999987
Q ss_pred HHHhhc-ccc
Q 000399 386 FLNKLA-GRR 394 (1566)
Q Consensus 386 ~ln~~a-grs 394 (1566)
.+..++ |+.
T Consensus 216 l~el~~~g~~ 225 (283)
T cd05048 216 LWEIFSYGLQ 225 (283)
T ss_pred HHHHHcCCCC
Confidence 555554 543
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-24 Score=243.97 Aligned_cols=194 Identities=15% Similarity=0.161 Sum_probs=155.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|..+. ...+...+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~vaik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 70 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKL---PGKKEIDVAIKTLKAGS-SDKQRLDFL--------TEASIMGQFDHPNIIRL 70 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEcc---CCCCcceEEEEEcCCCC-ChHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 3579999999999999999987532 11345678999876532 222233444 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+..++||||+++ +|.+++... .+.++...++.++.|++.||.|||+++|+||||||+||++++++ .+||
T Consensus 71 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~--~~~l 147 (266)
T cd05033 71 EGVVTKSRPVMIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (266)
T ss_pred eEEEecCCceEEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--CEEE
Confidence 9999999999999999987 999999743 33578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||+++......... ......++..|+|||.+.+..++...|+|+.|++
T Consensus 148 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~ 197 (266)
T cd05033 148 SDFGLSRRLEDSEATY---------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIV 197 (266)
T ss_pred Cccchhhcccccccce---------eccCCCCCccccChhhhccCCCccccchHHHHHH
Confidence 9999998654111100 0011224567999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=9e-24 Score=244.27 Aligned_cols=202 Identities=15% Similarity=0.131 Sum_probs=154.7
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++++.||+|+||.||+|...- ....+..+|+|.+...........++. +|+.+|+.++||||++++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~---~~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 69 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQ---DDGSQLKVAVKTMKLDIHTYSEIEEFL--------SEAACMKDFDHPNVMKLIGV 69 (273)
T ss_pred CccccccCcCCCceEEEEEEec---CCCCcceEEEEEeccCcCCHHHHHHHH--------HHHHHHHhCCCCCeeeEEee
Confidence 5788999999999999887521 112357899999875433333333444 58999999999999999998
Q ss_pred ccccCc------eeeeccCCcc-chhhhhccC----cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 244 LKTSGL------ITSVIPKTPY-TLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 244 ~~~~~~------l~LV~E~~~g-sL~~~l~~~----~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+..... .++||||+++ +|..++... ....+++..++.++.|++.||.|||+++|+||||||+||+++++
T Consensus 70 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~ 149 (273)
T cd05035 70 CFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED 149 (273)
T ss_pred eccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC
Confidence 865543 7999999996 999888532 22357888899999999999999999999999999999999998
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA- 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a- 391 (1566)
+ .+||+|||+++.......... . ....++..|+|||.+.+..++...|+|+.|++ .+..+.
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~~---~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~i-------l~el~~~ 211 (273)
T cd05035 150 M--TVCVADFGLSKKIYSGDYYRQ---G------RIAKMPVKWIAIESLADRVYTSKSDVWAFGVT-------MWEIATR 211 (273)
T ss_pred C--eEEECCccceeeccccccccc---c------ccccCCccccCHhhcccCCCCcccchHHHHHH-------HHHHHhC
Confidence 8 799999999986442111000 0 01124567999999988889999999999988 566665
Q ss_pred ccc
Q 000399 392 GRR 394 (1566)
Q Consensus 392 grs 394 (1566)
|..
T Consensus 212 g~~ 214 (273)
T cd05035 212 GQT 214 (273)
T ss_pred CCC
Confidence 544
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.8e-24 Score=267.06 Aligned_cols=196 Identities=14% Similarity=0.099 Sum_probs=151.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~ 241 (1566)
++++.+.|.+|||+.||+|++. ..+..+|+|++.-. +..+. +.+. +||++|+.|+ |||||.++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~------~~~~~~AlKrm~~~--de~~L-~~v~-------~EI~~MK~L~gh~nIV~yi 101 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDV------KGGKKYALKRMYVN--DEEAL-NAVK-------REIDIMKLLSGHKNIVSYI 101 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEec------CCCceeeeeeeecC--CHHHH-HHHH-------HHHHHHHHhcCCCceeeEe
Confidence 6889999999999999999963 33488999998754 22222 2332 7999999997 99999999
Q ss_pred cccc-cc------CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhcc--ccCCCccCCCccccc
Q 000399 242 GLLK-TS------GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD 311 (1566)
Q Consensus 242 ~~~~-~~------~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~g--IiHrDLKp~NILl~~ 311 (1566)
+... .. -.++|.||||.| .|-+++..+-...|++.++..|++|+|+|+.+||.+. |||||||-|||||+.
T Consensus 102 dss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~ 181 (738)
T KOG1989|consen 102 DSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA 181 (738)
T ss_pred ccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC
Confidence 9432 11 257888999995 9999998655556999999999999999999999988 999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc---cccchhhcccccccccc
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l---~~~~y~~~~d~Ws~G~i 378 (1566)
++ ..||||||.|......... ......+. -.-....|+.|++||++ .+...+++.|+|..|||
T Consensus 182 ~g--~~KLCDFGSatt~~~~~~~-~~e~~~ve-~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGcl 247 (738)
T KOG1989|consen 182 DG--NYKLCDFGSATTKILSPTS-AQEVNYVE-EEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCL 247 (738)
T ss_pred CC--CEEeCcccccccccCCCcc-HHHHHHHH-HHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHH
Confidence 99 7999999998753321100 00000000 00112378999999987 57788999999999997
|
|
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-23 Score=240.92 Aligned_cols=195 Identities=15% Similarity=0.202 Sum_probs=157.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||++.. .++..+|+|.+...... ..++. +|+.+|+.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKW-------RAQIKVAIKAINEGAMS---EEDFI--------EEAKVMMKLSHPKLVQLY 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEe-------ccCceEEEEecccCCcc---HHHHH--------HHHHHHHHCCCCCceeEE
Confidence 5799999999999999998764 34567899987643222 22344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..++||||+++ +|.+++.... ..++...++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05114 66 GVCTQQKPLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG--VVKVS 142 (256)
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC--eEEEC
Confidence 999999999999999986 9999987432 3467888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|||+++........ ......++..|+|||++.+..++...|.|+.|++ .+..++ |+.
T Consensus 143 d~g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~-------l~el~~~g~~ 200 (256)
T cd05114 143 DFGMTRYVLDDEYT----------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVL-------MWEVFTEGKM 200 (256)
T ss_pred CCCCccccCCCcee----------ccCCCCCchhhCChhhcccCccchhhhhHHHHHH-------HHHHHcCCCC
Confidence 99999854321100 0112234567999999988889999999999987 566666 554
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-23 Score=239.98 Aligned_cols=199 Identities=20% Similarity=0.252 Sum_probs=165.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|+.++.||+|+||.||.+++. .++..+++|.+...........++. +|+.+|++++|+||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRT------EDDSLVVWKEVNLTRLSEKERRDAL--------NEIVILSLLQHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEc------CCCcEEEEEEEeecccchhHHHHHH--------HHHHHHHhCCCCCeeEEEe
Confidence 5899999999999999987753 5788899999876544444444444 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+++||||+++ +|.+++...+...+++..+..++.|++.||.|||+.|++||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~--~~kl~d 144 (256)
T cd08221 67 HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGD 144 (256)
T ss_pred EEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC--CEEECc
Confidence 99999999999999986 999999754445678889999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... ......+++.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 ~~~~~~~~~~~~-----------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i-------~~~l~~g~~~ 200 (256)
T cd08221 145 FGISKILGSEYS-----------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCV-------LYELLTLKRT 200 (256)
T ss_pred CcceEEcccccc-----------cccccCCCccccCHhhcCCCCCCCcchhHHHHHH-------HHHHHHCCCC
Confidence 999985432110 1122347889999999988888889999999988 6667777664
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-23 Score=251.39 Aligned_cols=203 Identities=15% Similarity=0.127 Sum_probs=157.7
Q ss_pred cceeeeec--chhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 166 PIAFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 166 ~~~~IG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
++++||+| +||+||+++++ .++..||+|.+...... ....+++. +|+.+++.++||||++++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~~-------~e~~~l~~l~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYK------PTGEYVTVRRINLEACT-NEMVTFLQ-------GELHVSKLFNHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEeec------ccCcEEEEEEechhhcc-HHHHHHHH-------HHHHHHHhcCCCCeeeEEEE
Confidence 57889999 67899998863 67899999998764332 22334444 69999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+..++..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+|||++.++ .++++||
T Consensus 68 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~--~~~l~~~ 145 (327)
T cd08227 68 FIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGL 145 (327)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC--cEEEccc
Confidence 9999999999999996 999999754344578888999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|.+.......... .....+.....++..|+|||++.+ ..|+..+|+|+.|++ .+..++|+.+
T Consensus 146 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~i-------l~el~~g~~p 209 (327)
T cd08227 146 RSNLSMINHGQRL----RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT-------ACELANGHVP 209 (327)
T ss_pred chhhccccccccc----cccccccccccceecccChHHhhcccCCCCchhhHHHHHHH-------HHHHHHCCCC
Confidence 8765332111000 000001112346677999999875 458889999999987 6777778753
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-22 Score=239.37 Aligned_cols=223 Identities=11% Similarity=0.164 Sum_probs=201.8
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccccee
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVr 1356 (1566)
..|++.|-+ |||...| ++++-..|+|.|||.+++ .++++.-..-+|++..|-..-+.+++||. |..||
T Consensus 10 ~~rSdRVKsVd~HPtePw-----~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsD----D~~Ir 80 (794)
T KOG0276|consen 10 QSRSDRVKSVDFHPTEPW-----ILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSD----DMQIR 80 (794)
T ss_pred hccCCceeeeecCCCCce-----EEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecC----CceEE
Confidence 347888888 8999998 999999999999999987 77888888899999999999999999998 99999
Q ss_pred eEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCC-cEEEEeecccccccccCCCCCcccccccCC
Q 000399 1357 KWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1566)
Q Consensus 1357 lWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg-~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~ 1433 (1566)
|++..|++.+.+|+.|.+.|.||+.+|...++.|. |-+||+||.+.+ .|.++|.+|
T Consensus 81 Vfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH--------------------- 139 (794)
T KOG0276|consen 81 VFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGH--------------------- 139 (794)
T ss_pred EEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCc---------------------
Confidence 99999999999999999999999999999998766 899999999865 677778775
Q ss_pred CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCC
Q 000399 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1513 (1566)
Q Consensus 1434 ~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~ 1513 (1566)
+..|.+++|+|. |.+.++++|-|+||++|.+.+..+..++++| ..-|++|++-+.+
T Consensus 140 ---------~HyVMqv~fnPk---------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gH------ekGVN~Vdyy~~g 195 (794)
T KOG0276|consen 140 ---------EHYVMQVAFNPK---------DPNTFASASLDRTVKVWSLGSPHPNFTLEGH------EKGVNCVDYYTGG 195 (794)
T ss_pred ---------ceEEEEEEecCC---------CccceeeeeccccEEEEEcCCCCCceeeecc------ccCcceEEeccCC
Confidence 567999999997 6889999999999999999999999999987 4457889887654
Q ss_pred cccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1514 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1514 ~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
. -.+|+||++|.+|++||..|..|++++.||.+.|..+.|+|.
T Consensus 196 d---------kpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~ 238 (794)
T KOG0276|consen 196 D---------KPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPE 238 (794)
T ss_pred C---------cceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCC
Confidence 2 258999999999999999999999999999999999999984
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-22 Score=217.71 Aligned_cols=257 Identities=13% Similarity=0.050 Sum_probs=189.9
Q ss_pred cCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecC-cceEEEeeccCCCcccc
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGT 1354 (1566)
Q Consensus 1281 ~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~t 1354 (1566)
.|...|.+ ++.+|.. |++|+.|+++.+|+++.. .--..+||++.|..++|+| ....|++++. |++
T Consensus 18 ~~~~~v~Sv~wn~~g~~-----lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~----dk~ 88 (313)
T KOG1407|consen 18 GHVQKVHSVAWNCDGTK-----LASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASG----DKT 88 (313)
T ss_pred hhhhcceEEEEcccCce-----eeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecC----Cce
Confidence 35555655 6788988 999999999999999876 2245689999999999988 5678999998 999
Q ss_pred eeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccC
Q 000399 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1566)
Q Consensus 1355 VrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~ 1432 (1566)
|++||+++++|........+.++ ++|+|+|++++.+ |..|.+.|.++.+.....+......-++-..+++.....+.
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~G 167 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNG 167 (313)
T ss_pred EEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecC
Confidence 99999999999988876666665 7899999998655 88999999998887765432211111111111121111111
Q ss_pred CC--CCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhcc
Q 000399 1433 QV--GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1566)
Q Consensus 1433 ~~--~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s 1510 (1566)
.+ .++.. ..-.+|.++.-||.+-.|+.++|+|+++++|+.|..+.+||+...-|++.+..+.. +|+.+
T Consensus 168 lG~v~ILsy-psLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldw------pVRTl--- 237 (313)
T KOG1407|consen 168 LGCVEILSY-PSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDW------PVRTL--- 237 (313)
T ss_pred CceEEEEec-cccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccC------ceEEE---
Confidence 11 11111 12234444444554444455555699999999999999999999999998886633 34444
Q ss_pred CCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1511 ~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.||.||++||+||+|..|-|=++.||..+..++ |+++-..|+|+|..
T Consensus 238 --------SFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~ 284 (313)
T KOG1407|consen 238 --------SFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKR 284 (313)
T ss_pred --------EeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCC
Confidence 456788999999999999999999999999998 89999999999963
|
|
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-23 Score=241.86 Aligned_cols=197 Identities=15% Similarity=0.154 Sum_probs=158.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+++++||+|+||.||+|.. .++..+|+|.+..... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-------NNSTKVAVKTLKPGTM---SVQAFL--------EEANLMKTLQHDKLVRL 66 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-------cCCceEEEEEccCCch---hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999998874 3456789998764322 122333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+.+.+..++||||+++ +|.+++.......++...++.++.|++.||.|||+++++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l 144 (261)
T cd05072 67 YAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL--MCKI 144 (261)
T ss_pred EEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC--cEEE
Confidence 9999999999999999986 999999754445577788889999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ......++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 145 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~~l~t~g~~ 203 (261)
T cd05072 145 ADFGLARVIEDNEYT----------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL-------LYEIVTYGKI 203 (261)
T ss_pred CCCccceecCCCcee----------ccCCCccceecCCHHHhccCCCChhhhhhhhHHH-------HHHHHccCCC
Confidence 999999864421100 0112235567999999988888889999999987 556665 543
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.4e-24 Score=241.27 Aligned_cols=187 Identities=18% Similarity=0.235 Sum_probs=157.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccC--CC--
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PN-- 236 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H--pN-- 236 (1566)
..+|++++.+|+|+||.|-++.+. +.+..||||+++.-....+ ++.-|+++|+++.+ ||
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~------~~~~~vAlKIik~V~kYre-----------Aa~iEi~vLqki~~~DP~g~ 150 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDR------ETKEHVALKIIKNVDKYRE-----------AALIEIEVLQKINESDPNGK 150 (415)
T ss_pred ccceehhhhhcCCcccceEEEeec------CCCceehHHHHHHHHHHhh-----------HHHHHHHHHHHHHhcCCCCc
Confidence 568999999999999999998874 4589999999875222111 23358999999942 43
Q ss_pred --cccccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 237 --VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 237 --IV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+|++.++|.-.++.|||+|.++-+++++|+.+...+++..+++.+++|++.++++||+.+++|-||||+|||+.+...
T Consensus 151 ~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 151 FRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY 230 (415)
T ss_pred eEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence 889999999999999999999989999999877788999999999999999999999999999999999999854321
Q ss_pred ------------------hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccc
Q 000399 315 ------------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1566)
Q Consensus 315 ------------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G 376 (1566)
..|||+|||.|+..... ....+.|..|+|||++.+..|...||+|+.|
T Consensus 231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--------------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--------------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIG 296 (415)
T ss_pred EEEeccCCccceeccCCCcceEEEecCCcceeccC--------------cceeeeccccCCchheeccCcCCccCceeee
Confidence 26799999999975531 1223588999999999999999999999999
Q ss_pred cc
Q 000399 377 EL 378 (1566)
Q Consensus 377 ~i 378 (1566)
||
T Consensus 297 CI 298 (415)
T KOG0671|consen 297 CI 298 (415)
T ss_pred eE
Confidence 99
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.3e-23 Score=238.85 Aligned_cols=199 Identities=20% Similarity=0.164 Sum_probs=160.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|++++.||+|+||.||++.++ .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHR------TDGKQYVIKKLNLRNASRRERKAAE--------QEAQLLSQLKHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEc------CCCcEEEEEEEehhhcCHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 4899999999999999998863 4577899999876443333333333 5889999999999999999
Q ss_pred ccccc-CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTS-GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~-~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
.+... ..+|+||||+++ +|.+++.......+++..++.++.|++.|+.+||++||+||||||+||+++.++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~--~~~l~ 144 (257)
T cd08223 67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN--IIKVG 144 (257)
T ss_pred eecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC--cEEEe
Confidence 88644 468999999986 999999754455678899999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++...... . ......+++.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 df~~~~~~~~~~-----~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~~ 201 (257)
T cd08223 145 DLGIARVLENQC-----D------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCC-------VYEMATLKHA 201 (257)
T ss_pred cccceEEecccC-----C------ccccccCCcCccChhHhcCCCCCchhhhHHHHHH-------HHHHHcCCCC
Confidence 999987543210 0 0112347888999999998888899999999987 6666777654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.5e-23 Score=242.85 Aligned_cols=204 Identities=16% Similarity=0.199 Sum_probs=157.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.... .....+..+|+|.+.... ..+...++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~--~~~~~~~~~~ik~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~niv~~ 72 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYL--PGMDHAQLVAIKTLKDIN-NPQQWGEFQ--------QEASLMAELHHPNIVCL 72 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEec--CCCCCcceEEEEeccCCC-CHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 3578999999999999999987421 112456889999986432 122222333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc---------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP---------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~---------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp 304 (1566)
++++...+..|+||||+++ +|.+++.... ...+++..+..++.|++.||.|||++||+||||||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 152 (283)
T cd05090 73 LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAA 152 (283)
T ss_pred EEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhcccc
Confidence 9999999999999999986 9999885221 12366777888999999999999999999999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhh
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL 384 (1566)
+|||+++++ .+||+|||+++......... ......++..|+|||.+.+..++...|+|+.|++
T Consensus 153 ~nili~~~~--~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i------ 215 (283)
T cd05090 153 RNILIGEQL--HVKISDLGLSREIYSADYYR---------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV------ 215 (283)
T ss_pred ceEEEcCCC--cEEeccccccccccCCccee---------cccCCCccceecChHHhccCCCCchhhhHHHHHH------
Confidence 999999988 79999999998643211000 0112235667999999988888999999999987
Q ss_pred hHHHhhc-cc
Q 000399 385 LFLNKLA-GR 393 (1566)
Q Consensus 385 ~~ln~~a-gr 393 (1566)
.+..++ |.
T Consensus 216 -l~el~~~g~ 224 (283)
T cd05090 216 -LWEIFSFGL 224 (283)
T ss_pred -HHHHHcCCC
Confidence 555665 54
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-23 Score=243.35 Aligned_cols=190 Identities=15% Similarity=0.108 Sum_probs=156.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||.||+|.+. .++..+|+|.+..+. ......++. +|+.+|++++||||+++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 66 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHL------LTRRILAVKVIPLDI-TVELQKQIM--------SELEILYKCDSPYIIGFYG 66 (279)
T ss_pred cchheeeeccCCCeEEEEEEEc------CCCcEEEEEEEecCC-ChHHHHHHH--------HHHHHHHhCCCCCeeeEEE
Confidence 6889999999999999998863 568889999987542 222223344 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+..++||||+++ +|..+. .+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~--~~~l~d 138 (279)
T cd06619 67 AFFVENRISICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG--QVKLCD 138 (279)
T ss_pred EEEECCEEEEEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC--CEEEee
Confidence 99999999999999997 665432 257778889999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||++...... ......++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 139 fg~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~-------l~~l~~g~~p 192 (279)
T cd06619 139 FGVSTQLVNS-------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGIS-------FMELALGRFP 192 (279)
T ss_pred CCcceecccc-------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHH-------HHHHHhCCCC
Confidence 9999754311 0112348889999999998889999999999987 6667777653
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.3e-23 Score=243.17 Aligned_cols=196 Identities=15% Similarity=0.206 Sum_probs=153.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
..|++.+.||+|+||.||+|..+. .......+|+|.+.... ......++. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~ni~~~~ 71 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKL---PGKREIFVAIKTLKSGY-TEKQRRDFL--------SEASIMGQFDHPNIIHLE 71 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEec---CCCCceeEEEEEcCCCC-CHHHHHHHH--------HHHHHHHhCCCcCcceEE
Confidence 468999999999999999988532 11234579999986532 222233444 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++..++||||+++ +|.++++.. .+.++...++.++.|++.||.|||++|++||||||+||+++.++ .+||+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~--~~kl~ 148 (269)
T cd05065 72 GVVTKSRPVMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL--VCKVS 148 (269)
T ss_pred EEECCCCceEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC--cEEEC
Confidence 999999999999999987 999998743 34578888999999999999999999999999999999999888 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++....... ..... ...+...+..|+|||.+.+..++...|+|+.|++
T Consensus 149 dfg~~~~~~~~~~-----~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~ 200 (269)
T cd05065 149 DFGLSRFLEDDTS-----DPTYT-SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 200 (269)
T ss_pred CCccccccccCcc-----ccccc-cccCCCcceeecCHhHhccCcccchhhhhhhHHH
Confidence 9999885442111 00000 0011112456999999998889999999999987
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-22 Score=227.55 Aligned_cols=242 Identities=18% Similarity=0.257 Sum_probs=199.0
Q ss_pred ccccccccchHHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEee--eeehhhhhccCcceeeee
Q 000399 1260 RRVYDYHKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA--SILSSIRAHHGALRSVAV 1335 (1566)
Q Consensus 1260 ~~~~~le~~~~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~--~~l~tl~gH~~~V~slaf 1335 (1566)
-+++|.+....++-+. .|++.|.+ |+..|++ |+++|.|-.+++||.++ .+++++.||...|.+++|
T Consensus 132 ikv~D~~tg~~e~~Lr-----GHt~sv~di~~~a~Gk~-----l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f 201 (406)
T KOG0295|consen 132 IKVFDTETGELERSLR-----GHTDSVFDISFDASGKY-----LATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFF 201 (406)
T ss_pred EEEEEccchhhhhhhh-----ccccceeEEEEecCccE-----EEecCCccchhheeHHHHHHHHHHhcCcccceeeEEE
Confidence 3455555444444444 48888888 7777887 99999999999999987 388999999999999999
Q ss_pred cCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccc
Q 000399 1336 GQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQS 1413 (1566)
Q Consensus 1336 spd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~ 1413 (1566)
-|.|.+++|+|. |.+|+.||+.+|-|+.++.+|...|..++.+.+|..+||| |.+|++|-+.+++|...+.+|.
T Consensus 202 ~P~gd~ilS~sr----D~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hE 277 (406)
T KOG0295|consen 202 LPLGDHILSCSR----DNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHE 277 (406)
T ss_pred EecCCeeeeccc----ccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccc
Confidence 999999999998 9999999999999999999999999999999999999998 9999999999997776666543
Q ss_pred cc--------------------------ccccCCCCCcccccccCCCCC-CCCcccccccccccccchhHHHhhhhhccc
Q 000399 1414 MD--------------------------SLHGGSPSSSISKINTDQVGM-LNSNTLSSGILSTAFDGNLYTCLHHIECVE 1466 (1566)
Q Consensus 1414 ~~--------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~svafsp~~~t~v~~~pdg~ 1466 (1566)
-. .....+.+..+++|+...+.. ..+.+|.++|..++|+|. |+
T Consensus 278 h~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~----------Gk 347 (406)
T KOG0295|consen 278 HPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPG----------GK 347 (406)
T ss_pred cceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCC----------Ce
Confidence 22 122223344455666555443 346689999999999998 99
Q ss_pred eEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeec
Q 000399 1467 RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1467 ~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
+|+++..|+++|+||+++++|.+++..| ...|+++.|+... .+++||+-|..+++|..+
T Consensus 348 yi~ScaDDktlrvwdl~~~~cmk~~~ah------~hfvt~lDfh~~~-----------p~VvTGsVdqt~KvwEcr 406 (406)
T KOG0295|consen 348 YILSCADDKTLRVWDLKNLQCMKTLEAH------EHFVTSLDFHKTA-----------PYVVTGSVDQTVKVWECR 406 (406)
T ss_pred EEEEEecCCcEEEEEeccceeeeccCCC------cceeEEEecCCCC-----------ceEEeccccceeeeeecC
Confidence 9999999999999999999999999866 5677777775332 389999999999999854
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-23 Score=252.69 Aligned_cols=189 Identities=14% Similarity=0.135 Sum_probs=156.6
Q ss_pred cceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc--ccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 166 PIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 166 ~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~--~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
....||+|+|-+||+|.|. .+|..||...++..+..... ..+|. .|+++|+.|+|||||++|++
T Consensus 44 ~~evLGrGafKtVYka~De------~~giEVAWnqvk~~d~~q~~~~leR~~--------~Ev~lLKsL~H~NIirfy~S 109 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDE------EEGIEVAWNQVKIRDVTQSPEELERLY--------SEVHLLKSLKHPNIIRFYDS 109 (632)
T ss_pred hhhhcccccceeeeecccc------ccchhhHHHHHhHHHhhcChHHHHHHH--------HHHHHHccCCCCceeeeeeh
Confidence 4578999999999999984 68888988777655443322 24444 59999999999999999999
Q ss_pred ccccCc--eeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhcc--ccCCCccCCCccccccchhhhh
Q 000399 244 LKTSGL--ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 244 ~~~~~~--l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~g--IiHrDLKp~NILl~~~~~~~vK 318 (1566)
+.+..+ +.+|+|.+. |+|..|+++ .+.+....++.|++||++||.|||++. |||||||.+||+|+.+. ..||
T Consensus 110 W~d~~n~~in~iTEL~TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~-G~VK 186 (632)
T KOG0584|consen 110 WVDTDNKTINFITELFTSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNL-GEVK 186 (632)
T ss_pred eecCCCceeeeeeecccCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCc-Ccee
Confidence 987664 888899998 599999984 445778889999999999999999975 99999999999999875 3899
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
|.|+|||+.... .+...++|||.|||||+.. ..|++.+|+|+.|-- +|++.++
T Consensus 187 IGDLGLAtl~r~-------------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMC-------mLEMvT~ 239 (632)
T KOG0584|consen 187 IGDLGLATLLRK-------------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMC-------MLEMVTS 239 (632)
T ss_pred ecchhHHHHhhc-------------cccceeccCccccChHHHh-hhcchhhhhhhhhHH-------HHHHHhc
Confidence 999999986552 1334578999999999988 689999999999933 6777665
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-23 Score=239.07 Aligned_cols=196 Identities=19% Similarity=0.200 Sum_probs=157.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.+ .++..+|+|.+..... ...++. +|+.++++++||||++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-------~~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLW-------NNTTPVAVKTLKPGTM---DPKDFL--------AEAQIMKKLRHPKLIQLY 67 (261)
T ss_pred hheeeEEEecccCCccEEEEEe-------cCCeEEEEEeeCCCcc---cHHHHH--------HHHHHHHHCCCCCcccee
Confidence 5799999999999999998874 3456799999875432 223344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~ 145 (261)
T cd05068 68 AVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN--ICKVA 145 (261)
T ss_pred EEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC--CEEEC
Confidence 999999999999999965 999999754444578888999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|||+++....... .. ..+...+..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 146 dfg~~~~~~~~~~-----~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~el~t~g~~ 203 (261)
T cd05068 146 DFGLARVIKEDIY-----EA-----REGAKFPIKWTAPEAALYNRFSIKSDVWSFGIL-------LTEIVTYGRM 203 (261)
T ss_pred CcceEEEccCCcc-----cc-----cCCCcCceeccCccccccCCCCchhhHHHHHHH-------HHHHHhcCCC
Confidence 9999986542100 00 011123457999999988888999999999987 556665 554
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-23 Score=241.90 Aligned_cols=200 Identities=19% Similarity=0.160 Sum_probs=161.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|++. .++..+|||.+....... .....+. +|+.+++.++||||+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCL------LDRKPVALKKVQIFEMMDAKARQDCV--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEe------CCCCEEEEEEeeccccCCHHHHHHHH--------HHHHHHHhCCCcceeee
Confidence 57999999999999999998863 467899999876532222 2222333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++.+.+..++||||+++ +|.+++... ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~--~~ 145 (267)
T cd08228 68 LDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC--CE
Confidence 9999999999999999996 999888632 223478888999999999999999999999999999999999988 69
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+|||+++....... ......+++.|+|||.+.+..++...|.|+.|++ .+..++|+.+
T Consensus 146 ~l~d~g~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~-------l~el~~g~~p 205 (267)
T cd08228 146 KLGDLGLGRFFSSKTT-----------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL-------LYEMAALQSP 205 (267)
T ss_pred EECccccceeccchhH-----------HHhcCCCCccccChhhhccCCCCchhhHHHHHHH-------HHHHhcCCCC
Confidence 9999999886432100 0112247788999999988888889999999987 6677777653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-23 Score=241.02 Aligned_cols=198 Identities=18% Similarity=0.193 Sum_probs=159.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||+|.++ ..+..+|+|.+.... ....++. +|+++++.++||||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~~K~~~~~~---~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDT---MEVEEFL--------KEAAVMKEIKHPNLVQLL 68 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEe------cCCceEEEEEecCCc---hHHHHHH--------HHHHHHHhCCCCChhheE
Confidence 46889999999999999998853 467889999876432 2223444 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++.+++||||+++ +|.+++.......++...++.++.|++.||.|||++|++||||||+||++++++ .+||+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl~ 146 (263)
T cd05052 69 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKVA 146 (263)
T ss_pred EEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--cEEeC
Confidence 999999999999999986 999999754445578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
|||+++......... .....++..|+|||.+.+..++...|+|+.|++ .+..++ |+.+
T Consensus 147 df~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~el~t~g~~p 205 (263)
T cd05052 147 DFGLSRLMTGDTYTA----------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL-------LWEIATYGMSP 205 (263)
T ss_pred CCccccccccceeec----------cCCCCCccccCCHHHhccCCCCchhHHHHHHHH-------HHHHHcCCCCC
Confidence 999998644211000 011123567999999988888999999999987 666665 5543
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.7e-23 Score=242.35 Aligned_cols=199 Identities=22% Similarity=0.277 Sum_probs=157.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||+|.+. .++..+|+|.+..... ......+. +|+.+|+.++|+||+++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~ni~~~ 68 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISR------INGQLVALKVISMKTE-EGVPFTAI--------REASLLKGLKHANIVLL 68 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEc------CCCcEEEEEEecccCc-CCCcHHHH--------HHHHHHHhcCCCCEeEE
Confidence 467999999999999999998753 4678899999865422 11112223 58999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++...+..|+||||++++|.+.+... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~ 145 (291)
T cd07870 69 HDIIHTKETLTFVFEYMHTDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecccCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC--cEEEe
Confidence 9999999999999999998888777532 23467778889999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... . .....+++.|+|||++.+ ..++...|+|+.|++ .+..++|+.+
T Consensus 146 Dfg~~~~~~~~~~-----~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~~ 203 (291)
T cd07870 146 DFGLARAKSIPSQ-----T------YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCI-------FIEMLQGQPA 203 (291)
T ss_pred ccccccccCCCCC-----C------CCCccccccccCCceeecCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 9999975331100 0 011236788999998865 357788999999987 6777777653
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-23 Score=247.37 Aligned_cols=210 Identities=21% Similarity=0.222 Sum_probs=166.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++.+.||+|+||.||+|.+. .++..+|+|.+.+...... ....+. +|+++++.++||||++++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~ 67 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLK------GTGKLFALKVLDKKEMIKRNKVKRVL--------TEQEILATLDHPFLPTLY 67 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEc------CCCcEEEEEEEeccccchHHHHHHHH--------HHHHHHHhCCCCCchhhe
Confidence 6899999999999999998863 3688999999886543321 222233 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+......|+||||+.+ +|.+++...+...+++..++.++.|++.||.|||++|++||||||+||+++.++ .++|+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~ 145 (316)
T cd05574 68 ASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--HIMLS 145 (316)
T ss_pred eeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC--CEEEe
Confidence 999999999999999987 999999755556688999999999999999999999999999999999999988 69999
Q ss_pred CcCCCCccccccccCCCC---C---------------CceeeeecCCcccccccccccccccchhhccccccccccCCch
Q 000399 321 DKPLVGFNSIADWCTIPT---S---------------PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~---~---------------~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfe 382 (1566)
|||++............. . .........+.|+..|+|||++.+..++..+|+|+.|++
T Consensus 146 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~l---- 221 (316)
T cd05574 146 DFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGIL---- 221 (316)
T ss_pred ecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHH----
Confidence 999987543211100000 0 000001224568889999999988888999999999987
Q ss_pred hhhHHHhhccccc
Q 000399 383 YLLFLNKLAGRRW 395 (1566)
Q Consensus 383 yL~~ln~~agrs~ 395 (1566)
.+..+.|+.+
T Consensus 222 ---l~~l~~g~~p 231 (316)
T cd05574 222 ---LYEMLYGTTP 231 (316)
T ss_pred ---HHHHhhCCCC
Confidence 6667777754
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-23 Score=241.99 Aligned_cols=196 Identities=17% Similarity=0.180 Sum_probs=156.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.. ..+..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~-------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 64 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKW-------RGQYDVAIKMIKEGSMS---EDEFI--------EEAKVMMKLSHEKLVQL 64 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEe-------cCCCcEEEEEcCCCccc---HHHHH--------HHHHHHhcCCCCCeeeE
Confidence 35799999999999999998764 23456999987653221 22344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+|+||||+++ +|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 141 (256)
T cd05113 65 YGVCTKQRPIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG--CVKV 141 (256)
T ss_pred EEEEccCCCcEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--CEEE
Confidence 9999998999999999986 9999997432 2578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ...+..++..|++||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 142 ~d~g~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~-------l~~l~~~g~~ 200 (256)
T cd05113 142 SDFGLSRYVLDDEYT----------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVL-------MWEVYSLGKM 200 (256)
T ss_pred CCCccceecCCCcee----------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHH-------HHHHhcCCCC
Confidence 999998854321000 0112235567999999988888999999999987 555565 554
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-23 Score=247.13 Aligned_cols=193 Identities=17% Similarity=0.199 Sum_probs=159.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++.+. .++..+|+|.+.... ......++. +|++++++++||||+++++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 66 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHR------PSGLIMARKLIHLEI-KPAIRNQII--------RELKVLHECNSPYIVGFYG 66 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEc------CCCeEEEEEEecccc-CHHHHHHHH--------HHHHHHHhCCCCCCCeEEE
Confidence 6899999999999999998763 467889999876431 111122233 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++.+++.+|+||||+++ +|.++++. .+.+++..++.++.|++.||.|||+ .+++||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~lv~ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--~~~l~ 142 (308)
T cd06615 67 AFYSDGEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLC 142 (308)
T ss_pred EEeeCCEEEEEeeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC--cEEEc
Confidence 99999999999999997 99999974 3557888899999999999999998 6999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++..... ......++..|+|||.+.+..++...|+|+.|++ .+..+.|+.
T Consensus 143 dfg~~~~~~~~-------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~-------l~~l~~g~~ 196 (308)
T cd06615 143 DFGVSGQLIDS-------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLS-------LVEMAIGRY 196 (308)
T ss_pred cCCCccccccc-------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHH-------HHHHHhCCC
Confidence 99998754310 0112347889999999988888889999999987 677777764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-22 Score=227.34 Aligned_cols=255 Identities=16% Similarity=0.182 Sum_probs=204.5
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccc
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~t 1354 (1566)
..|.+.|.. |-++... |+|||.|..|++|++.+. ...++.|-.+.|+++.|.+++..+++++. |++
T Consensus 172 d~h~gev~~v~~l~~sdt-----latgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~----d~~ 242 (459)
T KOG0288|consen 172 DAHEGEVHDVEFLRNSDT-----LATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASN----DKN 242 (459)
T ss_pred hccccccceeEEccCcch-----hhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecC----CCc
Confidence 346566654 4444333 999999999999999875 56788999999999999999999999998 999
Q ss_pred eeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccc--------ccccccCCCCC
Q 000399 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQS--------MDSLHGGSPSS 1424 (1566)
Q Consensus 1355 VrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~--------~~~~~~~~~~~ 1424 (1566)
+++|++.+.+...++.||++.|+++.|.-....++|| |.+||+||+..+.|.+++-.-+ ...+..+..+.
T Consensus 243 ~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~Dk 322 (459)
T KOG0288|consen 243 LRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDK 322 (459)
T ss_pred eeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeeccccc
Confidence 9999999999999999999999999998877778887 9999999999999887753211 11223344555
Q ss_pred cccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhH
Q 000399 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504 (1566)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V 1504 (1566)
.+..|+.............+.|.++..+++ |..+++++.|.++.++|+++....+++......-+ +-
T Consensus 323 kvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~----------g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~a--sD- 389 (459)
T KOG0288|consen 323 KVRFWDIRSADKTRSVPLGGRVTSLDLSMD----------GLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCA--SD- 389 (459)
T ss_pred ceEEEeccCCceeeEeecCcceeeEeeccC----------CeEEeeecCCCceeeeecccccEEEEeeccccccc--cc-
Confidence 667777766666665555667888877776 88999999999999999999999988886633211 11
Q ss_pred HHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCce--eeEeeeeccC
Q 000399 1505 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY--VTKVRIISKR 1566 (1566)
Q Consensus 1505 ~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~--V~~VafspdG 1566 (1566)
+....|||++.++|+||.||.|+||++.+|++...+...... |++++|+|.|
T Consensus 390 ----------wtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 390 ----------WTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG 443 (459)
T ss_pred ----------cceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC
Confidence 334456788899999999999999999999999988755544 9999999976
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.7e-22 Score=246.68 Aligned_cols=223 Identities=12% Similarity=0.091 Sum_probs=173.2
Q ss_pred cccCCCceec--cCC-CCCCCCCcccccccCccCCCCceEeee--------eehhhhhccCcceeeeecCcc-eEEEeec
Q 000399 1279 LMKCEPWFWF--PTP-AASWDGPDFLGRVGGLKDESPWKIKAS--------ILSSIRAHHGALRSVAVGQDE-CTVFTAG 1346 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSp-dg~~~~~~~LaSgS~D~~I~vWdl~~~--------~l~tl~gH~~~V~slafspd~-~~LaSgS 1346 (1566)
...|++.|++ |+| ++.+ |++||.|++|++||+..+ .+..+.+|...|.+++|+|++ .+|+|||
T Consensus 71 l~GH~~~V~~v~fsP~d~~~-----LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs 145 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQK-----LFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAG 145 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCE-----EEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEe
Confidence 4569999998 888 7777 999999999999998753 356788999999999999975 6899999
Q ss_pred cCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCC
Q 000399 1347 IGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1566)
Q Consensus 1347 ~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~ 1424 (1566)
. |++|+|||+.+++++..+.+|.+.|++++|++++..++++ |++|+|||+++++.+.++.+|...
T Consensus 146 ~----DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~--------- 212 (493)
T PTZ00421 146 A----DMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA--------- 212 (493)
T ss_pred C----CCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC---------
Confidence 8 9999999999999999999999999999999999999876 999999999999998888765321
Q ss_pred cccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEe----cCceEEEEEccCCc-eeeeeccCCcccC
Q 000399 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI----GNGSLRFIDINQGQ-KLHLWRGEPTELG 1499 (1566)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs----~DgtIrlWDi~tg~-~l~~~~~h~~~v~ 1499 (1566)
.+..+.|.++ +..+++++ .|++|++||+++.. .+.....+.
T Consensus 213 --------------------~~~~~~w~~~----------~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~---- 258 (493)
T PTZ00421 213 --------------------KSQRCLWAKR----------KDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQ---- 258 (493)
T ss_pred --------------------cceEEEEcCC----------CCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCC----
Confidence 1123445554 44555543 58999999999764 333332221
Q ss_pred chhhHHHhhccCCCcccCCCcccchhHHHhcc-CCCceeEEeeccCceeEEeec-cCceeeEeeeecc
Q 000399 1500 FPSLVSAICACGSEKMQAGGAVASPSWIAAGL-SSGQCRLFDVRSGNVIASWRA-HDGYVTKVRIISK 1565 (1566)
Q Consensus 1500 ~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs-~Dg~I~lWD~~sgk~l~~l~g-H~~~V~~Vafspd 1565 (1566)
...+.. ..+++++.+|++|+ .|+.|++||+++++.+..+.. +..++.+++|.|.
T Consensus 259 -~~~~~~-----------~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 259 -SSALFI-----------PFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred -CCceEE-----------EEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence 111111 22456777888777 599999999999998887654 4567889998885
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.6e-23 Score=246.05 Aligned_cols=204 Identities=17% Similarity=0.153 Sum_probs=158.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+.. ...+..+|+|.+...........+. ..+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~-------~~~e~~~l~~l~h~~i~~~~~ 69 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKN----GKDGKEYAIKKFKGDKEQYTGISQS-------ACREIALLRELKHENVVSLVE 69 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecC----CCCCCeEEEEEeccccccccCccHH-------HHHHHHHHHhcCCCCccceEE
Confidence 48899999999999999988631 1268899999988743222211111 126999999999999999999
Q ss_pred ccccc--CceeeeccCCccchhhhhccCc---ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc----cc
Q 000399 243 LLKTS--GLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD----SC 313 (1566)
Q Consensus 243 ~~~~~--~~l~LV~E~~~gsL~~~l~~~~---~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~----~~ 313 (1566)
++... ..+|+||||++++|.+++.+.. ...+++..++.++.||+.||.|||+++|+||||||+||+++. ++
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~ 149 (316)
T cd07842 70 VFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERG 149 (316)
T ss_pred EEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccc
Confidence 99888 7899999999998888775422 235788899999999999999999999999999999999998 66
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
.+||+|||+++......... .....+.++..|+|||++.+ ..++...|+|+.|++ .+..++|
T Consensus 150 --~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~-------l~~l~~~ 212 (316)
T cd07842 150 --VVKIGDLGLARLFNAPLKPL--------ADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCI-------FAELLTL 212 (316)
T ss_pred --eEEECCCccccccCCCcccc--------cccCCccccccccCHHHHhCCCCCCcHHHHHHHHHH-------HHHHHhc
Confidence 79999999998654211100 01123457888999998765 457889999999987 5666667
Q ss_pred cc
Q 000399 393 RR 394 (1566)
Q Consensus 393 rs 394 (1566)
+.
T Consensus 213 ~~ 214 (316)
T cd07842 213 EP 214 (316)
T ss_pred CC
Confidence 64
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-23 Score=237.44 Aligned_cols=184 Identities=16% Similarity=0.111 Sum_probs=146.2
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|+++ .++..+|+|.+.... .......+. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 65 (252)
T cd05084 1 ERIGRGNFGEVFSGRLR------ADNTPVAVKSCRETL-PPDLKAKFL--------QEARILKQYSHPNIVRLIGVCTQK 65 (252)
T ss_pred CccCcccCccEEEEEEe------cCCceEEEEecCccC-CHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEcCC
Confidence 46999999999998863 468889999876432 222222333 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
...|+||||+++ +|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++
T Consensus 66 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~ 142 (252)
T cd05084 66 QPIYIVMELVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN--VLKISDFGMSR 142 (252)
T ss_pred CCeEEEEeeccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC--cEEECccccCc
Confidence 999999999987 999998732 33478888999999999999999999999999999999999988 79999999987
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.......... ...-..+..|+|||.+.+..++...|+|+.|++
T Consensus 143 ~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 185 (252)
T cd05084 143 EEEDGVYAST---------GGMKQIPVKWTAPEALNYGRYSSESDVWSFGIL 185 (252)
T ss_pred cccccccccc---------CCCCCCceeecCchhhcCCCCChHHHHHHHHHH
Confidence 5331100000 000012346999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-23 Score=239.88 Aligned_cols=196 Identities=15% Similarity=0.147 Sum_probs=157.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|++. .++..+|+|++..... .....+. +|+.+++.++||||+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~--~~~~~~~--------~e~~~l~~~~h~~ii~~ 71 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNL------HTGELAAVKIIKLEPG--DDFSLIQ--------QEIFMVKECKHCNIVAY 71 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEEC------CCCeEEEEEEEecCcc--chHHHHH--------HHHHHHHhcCCCCeeee
Confidence 457999999999999999998853 4678899999864321 1112222 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+|+||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~--~~~l 147 (267)
T cd06646 72 FGSYLSREKLWICMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG--DVKL 147 (267)
T ss_pred eEEEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999996 99998863 34578889999999999999999999999999999999999988 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||+++...... . ......++..|+|||.+. ...++...|+|+.|++ .+..+.|+.
T Consensus 148 ~dfg~~~~~~~~~------~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~i-------l~el~~g~~ 207 (267)
T cd06646 148 ADFGVAAKITATI------A-----KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGIT-------AIELAELQP 207 (267)
T ss_pred CcCccceeecccc------c-----ccCccccCccccCHhHcccccCCCCcchhhHHHHHHH-------HHHHHhCCC
Confidence 9999998543110 0 011234778899999874 3446778999999987 566666664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-23 Score=238.84 Aligned_cols=186 Identities=19% Similarity=0.217 Sum_probs=150.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||+|++ ..+..+|+|.+.+.... ..++. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~-------~~~~~~~iK~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKW-------RGKIDVAIKMIREGAMS---EDDFI--------EEAKVMMKLSHPNLVQLY 65 (256)
T ss_pred HHcchhhhhccCCCceEEEeEe-------cCCccEEEEEeccCCCC---HHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 4689999999999999998874 24567899987653222 12344 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|.+++...+ ..+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05059 66 GVCTKQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN--VVKVS 142 (256)
T ss_pred EEEcCCCceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC--cEEEC
Confidence 999999999999999986 9999987432 3578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++........ ...+..++..|+|||++.+..++...|+|+.|++
T Consensus 143 dfg~~~~~~~~~~~----------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i 190 (256)
T cd05059 143 DFGLARYVLDDQYT----------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVL 190 (256)
T ss_pred Ccccceeccccccc----------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHH
Confidence 99999854321000 0011123456999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-23 Score=241.24 Aligned_cols=206 Identities=15% Similarity=0.127 Sum_probs=160.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|+..+.||+|+||.||++.+. .++..+|+|.+...........+... ...+|+.+++.++||||+++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~alk~~~~~~~~~~~~~~~~~----~~~~e~~~l~~l~h~~iv~~~~ 70 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDV------KTGTLMAVKQVTYVRNTSSEQEEVVE----ALRKEIRLMARLNHPHIIRMLG 70 (268)
T ss_pred CccccceecCcCceEEEEEEEc------CCCcEEEEEEeecccCCchhHHHHHH----HHHHHHHHHHHcCCCceehhhc
Confidence 4788899999999999988752 56888999998754322211111111 1126999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+..++||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++|++||||||+||+++.++. .+||+|
T Consensus 71 ~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~-~~~l~d 147 (268)
T cd06630 71 ATCEDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ-RLRIAD 147 (268)
T ss_pred eeccCCeEEEEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEcc
Confidence 99999999999999997 99999973 345788889999999999999999999999999999999987652 589999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||.++........ .........++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 148 fg~~~~~~~~~~~-------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~p 207 (268)
T cd06630 148 FGAAARLAAKGTG-------AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV-------IIEMATAKPP 207 (268)
T ss_pred ccccccccccccc-------CCccccccccccceeCHhHhccCCCCcccchHHHHHH-------HHHHHhCCCC
Confidence 9998865421100 0001122347888999999988888899999999987 5566667643
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-23 Score=239.52 Aligned_cols=202 Identities=15% Similarity=0.115 Sum_probs=158.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc--cchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES--KNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~--~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.+|++.+.||+|+||.||+|.+. .++..+|+|.+.......... .+.+. +|+.+++.++||||++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~~~-------~E~~~l~~l~h~~i~~ 68 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDA------DTGRELAVKQVQFDPESPETSKEVNALE-------CEIQLLKNLLHERIVQ 68 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEc------CCCcEEEEEEeecCcCCcccHHHHHHHH-------HHHHHHHhcCCCCeee
Confidence 46899999999999999988753 568899999886432221111 12222 6999999999999999
Q ss_pred cccccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 240 VLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++++.+. ..+++||||+++ +|.+++.. ...+++..++.++.|++.||.|||+++|+||||||+||+++.++ .
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~--~ 144 (265)
T cd06652 69 YYGCLRDPMERTLSIFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG--N 144 (265)
T ss_pred EEeEeccCCCceEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC--C
Confidence 99998764 468899999986 99999873 34467888899999999999999999999999999999999988 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+++.......... . .....++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 ~~l~Dfg~~~~~~~~~~~~~--~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~el~~g~~p 208 (265)
T cd06652 145 VKLGDFGASKRLQTICLSGT--G------MKSVTGTPYWMSPEVISGEGYGRKADIWSVGCT-------VVEMLTEKPP 208 (265)
T ss_pred EEECcCcccccccccccccc--c------cccCCCCccccChhhhcCCCCCcchhHHHHHHH-------HHHHhhCCCC
Confidence 99999999985432111000 0 112237788999999988888889999999987 6667777654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-23 Score=244.05 Aligned_cols=197 Identities=16% Similarity=0.188 Sum_probs=153.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||++..... ........+|+|.+..... .+...++. +|+.+++.+ +||||++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~-~~~~~~~~~a~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~~i~~ 80 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGL-DNPNETSTVAVKMLKDDAT-EKDLSDLV--------SEMEMMKMIGKHKNIIN 80 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecC-CCCCCceeEEEEEccCCCC-HHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 35799999999999999998775210 1113457889998875422 22223333 599999999 7999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccC--------------cccccchhHHHHHHHHHHHHHHHHhhccccCCCccC
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--------------~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp 304 (1566)
+++++..++.+++||||+++ +|.+++... ....++...++.++.|++.||.|||++||+||||||
T Consensus 81 ~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp 160 (293)
T cd05053 81 LLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAA 160 (293)
T ss_pred EEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccce
Confidence 99999999999999999986 999998631 234577888899999999999999999999999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+||+++.++ .+||+|||+++.......... ...-.++..|+|||++.+..++...|+|+.|+|
T Consensus 161 ~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 223 (293)
T cd05053 161 RNVLVTEDH--VMKIADFGLARDIHHIDYYRK---------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 223 (293)
T ss_pred eeEEEcCCC--eEEeCccccccccccccceec---------cCCCCCCccccCHHHhccCCcCcccceeehhhH
Confidence 999999988 799999999986542111000 001124556999999988888999999999988
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.1e-22 Score=229.57 Aligned_cols=262 Identities=15% Similarity=0.251 Sum_probs=188.6
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhh---hccCcceeeeecCcceEEEeeccCCCc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIR---AHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~---gH~~~V~slafspd~~~LaSgS~~~~~ 1351 (1566)
+...|...|.+ |||||.+ ++|.|.||+|.+||-+++ .+..+. +|.+.|.+++|+||++.|+|+|.
T Consensus 185 s~r~HskFV~~VRysPDG~~-----Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~Sa---- 255 (603)
T KOG0318|consen 185 SFREHSKFVNCVRYSPDGSR-----FATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSA---- 255 (603)
T ss_pred cccccccceeeEEECCCCCe-----EEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecC----
Confidence 45568899999 8999998 999999999999998876 566665 99999999999999999999999
Q ss_pred ccceeeEEeccccc-------------------------------------------ccccccccccccceEEeecCCce
Q 000399 1352 KGTVQKWELTRINC-------------------------------------------VSGYYGHEEVVNDICVLSSSGRI 1388 (1566)
Q Consensus 1352 D~tVrlWDl~tg~~-------------------------------------------i~tl~gH~~~V~sVafsp~g~~L 1388 (1566)
|+++||||+.+.++ ..++.||...|++++.++++.+|
T Consensus 256 Dkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i 335 (603)
T KOG0318|consen 256 DKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTI 335 (603)
T ss_pred CceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEE
Confidence 99999999964433 34458999999999999999999
Q ss_pred eec--cCcEEEeecCCCcEEEEe-eccccc----------ccccCCCCCcccccccCCCCC-----CCC-----------
Q 000399 1389 ASC--DGTLHVWNSQTGKLLSVF-AEQSMD----------SLHGGSPSSSISKINTDQVGM-----LNS----------- 1439 (1566)
Q Consensus 1389 aSg--DgtIkLWDl~tg~~l~~l-~~h~~~----------~~~~~~~~~~~~~~~~~~~~~-----~~~----------- 1439 (1566)
.|| ||.|.-||..+|..-+.. +.|... .+.+.+.+..+...+...... +.+
T Consensus 336 ~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~ 415 (603)
T KOG0318|consen 336 YSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLS 415 (603)
T ss_pred EeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcC
Confidence 887 999999999877654322 222211 122222222222221100000 000
Q ss_pred ----------------ccccc-ccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1440 ----------------NTLSS-GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1440 ----------------~~~~~-~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
.+++. ....+.|.+ ++++++|++..++.|+.|+.|++|.+..+....... ...|.+
T Consensus 416 d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~---s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~----~~~h~a 488 (603)
T KOG0318|consen 416 DGGTAVVACISDIVLLQDQTKVSSIPIGYES---SAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAK----LLEHRA 488 (603)
T ss_pred CCCEEEEEecCcEEEEecCCcceeecccccc---ceEEEcCCCCEEEEecccceEEEEEecCCcccceee----eecccC
Confidence 00000 011123332 466778889999999999999999998655332211 113566
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCce-eEEeeccCceeeEeeeeccC
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV-IASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~-l~~l~gH~~~V~~VafspdG 1566 (1566)
.|++|+++ ||+.+||+|...+.+.+||+.+++. ...|.=|...|.+|+|+|+.
T Consensus 489 ~iT~vayS-----------pd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n 542 (603)
T KOG0318|consen 489 AITDVAYS-----------PDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNN 542 (603)
T ss_pred CceEEEEC-----------CCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCc
Confidence 77777775 6668999999999999999998876 33466699999999999973
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-23 Score=241.20 Aligned_cols=196 Identities=15% Similarity=0.162 Sum_probs=158.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|++. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~--~~~~~~~--------~e~~~~~~l~h~~ii~~ 71 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNV------NTGELAAIKVIKLEPG--EDFAVVQ--------QEIIMMKDCKHSNIVAY 71 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEc------CCCcEEEEEEEecCch--hHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 458999999999999999998753 5688899999865321 1112222 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+.+|+||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~~l 147 (267)
T cd06645 72 FGSYLRRDKLWICMEFCGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG--HVKL 147 (267)
T ss_pred EEEEEeCCEEEEEEeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999997 99999873 44688999999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||++...... .. ......|+..|+|||++. ...++..+|+|+.|++ .+..+.|+.
T Consensus 148 ~dfg~~~~~~~~----~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i-------l~~l~~~~~ 207 (267)
T cd06645 148 ADFGVSAQITAT----IA-------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT-------AIELAELQP 207 (267)
T ss_pred CcceeeeEccCc----cc-------ccccccCcccccChhhhccccCCCCCchhhhHHHHHH-------HHHHhcCCC
Confidence 999998754310 00 011234788999999874 4457789999999987 555666654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-23 Score=240.28 Aligned_cols=197 Identities=18% Similarity=0.251 Sum_probs=157.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|+++ .++..+|+|++..........+.+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNR------ETGQIVAIKKFVESEDDPVIKKIAL--------REIRMLKQLKHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEEC------CCCcEEEEEEEeecccCccccHHHH--------HHHHHHHhCCCCCEeeee
Confidence 36999999999999999998863 4688999999875432222222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++......++||||+++ +|..++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~~l~ 142 (286)
T cd07847 67 EVFRRKRKLHLVFEYCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG--QIKLC 142 (286)
T ss_pred eEEeeCCEEEEEEeccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC--cEEEC
Confidence 999999999999999998 66666542 33478889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||++......... .....++..|+|||++.+ ..++...|+|+.|++ .+..+.|+.
T Consensus 143 dfg~~~~~~~~~~~-----------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i-------~~~l~~g~~ 199 (286)
T cd07847 143 DFGFARILTGPGDD-----------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCV-------FAELLTGQP 199 (286)
T ss_pred ccccceecCCCccc-----------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHH-------HHHHHhCCC
Confidence 99999865421100 011236778999998865 457789999999987 677777764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.8e-23 Score=241.90 Aligned_cols=194 Identities=16% Similarity=0.195 Sum_probs=152.7
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||+|.++. ....+..+|+|.+..... ......+. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~~~~ik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 71 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKL---PGKREIPVAIKTLKAGYT-EKQRRDFL--------SEASIMGQFDHPNIIHLE 71 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEec---CCCCceEEEEEECCCCCC-HHHHHHHH--------HHHHHHHhCCCCCcceEE
Confidence 579999999999999999887521 112345789998765321 22223333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++..|+||||+++ +|.+++... .+.++...+..++.|++.||.|||++|++||||||+|||++.++ .+||+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~--~~~l~ 148 (267)
T cd05066 72 GVVTKSKPVMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL--VCKVS 148 (267)
T ss_pred EEEecCCccEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC--eEEeC
Confidence 999999999999999986 999999743 34578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++........ . . ....-.++..|+|||.+.+..++...|.|+.|++
T Consensus 149 dfg~~~~~~~~~~~----~-~---~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~ 198 (267)
T cd05066 149 DFGLSRVLEDDPEA----A-Y---TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 198 (267)
T ss_pred CCCcccccccccce----e-e---ecCCCccceeecCHhHhccCccCchhhhHHHHHH
Confidence 99999865421100 0 0 0011113457999999998889999999999987
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.8e-23 Score=242.64 Aligned_cols=201 Identities=17% Similarity=0.198 Sum_probs=158.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|++|.||+|.++ .++..+|+|.+............+. +|+.+++.++||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDR------VTNETIALKKIRLEQEDEGVPSTAI--------REISLLKEMQHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEec------CCCcEEEEEehhhccccccchHHHH--------HHHHHHHhccCCCEeeEE
Confidence 57999999999999999998863 4678899999865432222222233 599999999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+++......|+||||++++|.+.+.......+++..++.++.||+.||.|||++||+||||||+||+++.++. .+||+|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~-~~kl~d 146 (294)
T PLN00009 68 DVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN-ALKLAD 146 (294)
T ss_pred EEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC-EEEEcc
Confidence 9999999999999999989888886544444577788899999999999999999999999999999986442 689999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... ......+++.|+|||.+.+ ..++...|+|+.|++ .+..++|+.+
T Consensus 147 fg~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i-------~~~l~tg~~p 203 (294)
T PLN00009 147 FGLARAFGIPVR-----------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCI-------FAEMVNQKPL 203 (294)
T ss_pred cccccccCCCcc-----------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 999975432100 0111236788999998765 457889999999987 6777777653
|
|
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.9e-23 Score=240.53 Aligned_cols=197 Identities=15% Similarity=0.164 Sum_probs=158.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+++++||+|+||.||+|.. .++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-------NGHTKVAIKSLKQGSMS---PEAFL--------AEANLMKQLQHPRLVRL 66 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-------CCCceEEEEEecCCCCc---HHHHH--------HHHHHHHhcCCcCeeeE
Confidence 35799999999999999999875 35678999998754332 22344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++. .+..|+||||+++ +|.+++.......++...+..++.|++.||.|||+.|++||||||+||+++.++ .++|
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05067 67 YAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL--CCKI 143 (260)
T ss_pred EEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC--CEEE
Confidence 99874 5678999999986 999998755555678888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
+|||+++........ ......++..|+|||.+....++...|+|+.|++ .+..++ |+.+
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~-------l~el~~~g~~p 203 (260)
T cd05067 144 ADFGLARLIEDNEYT----------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL-------LTEIVTYGRIP 203 (260)
T ss_pred ccCcceeecCCCCcc----------cccCCcccccccCHHHhccCCcCcccchHHHHHH-------HHHHHhCCCCC
Confidence 999999754411000 1112235677999999988888889999999987 555565 6653
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.7e-23 Score=243.00 Aligned_cols=208 Identities=17% Similarity=0.172 Sum_probs=160.7
Q ss_pred chhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCC
Q 000399 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 235 (1566)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~Hp 235 (1566)
......++|++.+.||+|+||.||+|.+. .++..+|+|.+............+ .+|+.+++.++||
T Consensus 6 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~ 71 (310)
T cd07865 6 PFCDEVSKYEKLAKIGQGTFGEVFKARHK------KTKQIVALKKVLMENEKEGFPITA--------LREIKILQLLKHE 71 (310)
T ss_pred cccchhhheEEEEEeecCCCEEEEEEEEC------CCCcEEEEEEEeccCCcCCchhHH--------HHHHHHHHhCCCC
Confidence 34556788999999999999999998863 468899999986543222111112 2589999999999
Q ss_pred CcccccccccccC--------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCc
Q 000399 236 NVAPVLGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1566)
Q Consensus 236 NIV~l~~~~~~~~--------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NI 307 (1566)
||+++++++.... ..++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 72 ~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~ni 150 (310)
T cd07865 72 NVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANI 150 (310)
T ss_pred CccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 9999999876543 45999999999998888642 33578999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhH
Q 000399 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLF 386 (1566)
Q Consensus 308 Ll~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ 386 (1566)
+++.++ .+||+|||+++......... . .......++..|+|||++.+. .++...|+|+.|++ .
T Consensus 151 l~~~~~--~~kl~dfg~~~~~~~~~~~~----~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~-------l 214 (310)
T cd07865 151 LITKDG--ILKLADFGLARAFSLSKNSK----P---NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI-------M 214 (310)
T ss_pred EECCCC--cEEECcCCCcccccCCcccC----C---CCccCcccCccccCcHHhcCCcccCchhhhHHHHHH-------H
Confidence 999988 79999999998654211110 0 011223467789999987653 46788999999987 5
Q ss_pred HHhhcccc
Q 000399 387 LNKLAGRR 394 (1566)
Q Consensus 387 ln~~agrs 394 (1566)
+..++|+.
T Consensus 215 ~el~t~~~ 222 (310)
T cd07865 215 AEMWTRSP 222 (310)
T ss_pred HHHHhCCC
Confidence 66667764
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-22 Score=239.95 Aligned_cols=217 Identities=18% Similarity=0.274 Sum_probs=180.3
Q ss_pred ccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccc
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1566)
Q Consensus 1288 ~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i 1366 (1566)
+|+|...| ++++-..|.|++||.+=+ ++..|..|.|+|+.++|+|+..+|+|||. |.+|+||+..+.+|+
T Consensus 16 sFHP~rPw-----ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGD----DykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 16 SFHPKRPW-----ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGD----DYKIKVWNYKTRRCL 86 (1202)
T ss_pred ecCCCCCE-----EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCC----ccEEEEEecccceeh
Confidence 48999998 999999999999999866 78899999999999999999999999998 999999999999999
Q ss_pred cccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCccccc
Q 000399 1367 SGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1444 (1566)
Q Consensus 1367 ~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1444 (1566)
.++.||-+.|..+.|++.-.+|+|+ |.||+|||.++++|+.++.+| ..
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGH------------------------------nH 136 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGH------------------------------NH 136 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecC------------------------------ce
Confidence 9999999999999999999999877 999999999999999999887 45
Q ss_pred ccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeecc--------CC---------c------ccCch
Q 000399 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG--------EP---------T------ELGFP 1501 (1566)
Q Consensus 1445 ~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~--------h~---------~------~v~~~ 1501 (1566)
.|.|..|+|. ...++++|-|.|||+||+.--+....-.+ +. + .-+|.
T Consensus 137 YVMcAqFhpt----------EDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD 206 (1202)
T KOG0292|consen 137 YVMCAQFHPT----------EDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD 206 (1202)
T ss_pred EEEeeccCCc----------cceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence 5778888886 67999999999999999963221111000 00 0 00223
Q ss_pred hhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc--eeEEeeccCceeeEeeeec
Q 000399 1502 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1502 ~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk--~l~~l~gH~~~V~~Vafsp 1564 (1566)
.-|+-+ +|+|.-.+|+||++|..|++|....-+ .+.+.+||.+.|++|-|+|
T Consensus 207 RGVNwa-----------AfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp 260 (1202)
T KOG0292|consen 207 RGVNWA-----------AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHP 260 (1202)
T ss_pred cccceE-----------EecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecC
Confidence 333334 445555689999999999999987544 4567789999999999999
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-23 Score=251.06 Aligned_cols=196 Identities=19% Similarity=0.238 Sum_probs=159.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...+|++.+.||+|+||.||+|++. .++..+|+|.+.+.........++. +|+.+++.++||||++
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 79 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDT------VTGQNVAIKKLSRPFQNVTHAKRAY--------RELVLMKLVNHKNIIG 79 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEEC------CCCCEEEEEecCccccChhHHHHHH--------HHHHHHHhcCCCCCcc
Confidence 4678999999999999999998863 4788999999865322222222333 5999999999999999
Q ss_pred cccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
++++|... ...|+||||++++|.+.+... +++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 80 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155 (353)
T ss_pred eeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence 99988644 357999999999999888632 78888999999999999999999999999999999999998
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||+++...... . .....++..|+|||++.+..++...|+|+.|++ .+..+.|+
T Consensus 156 --~~kL~Dfg~~~~~~~~~------~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~-------l~~l~~g~ 214 (353)
T cd07850 156 --TLKILDFGLARTAGTSF------M------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGEMIRGT 214 (353)
T ss_pred --CEEEccCccceeCCCCC------C------CCCCcccccccCHHHHhCCCCCCchhhHhHHHH-------HHHHHHCC
Confidence 79999999998643210 0 112247788999999999899999999999987 66666776
Q ss_pred c
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 215 ~ 215 (353)
T cd07850 215 V 215 (353)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.6e-23 Score=238.00 Aligned_cols=197 Identities=13% Similarity=0.121 Sum_probs=161.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|.+ ..+..+|+|.+..... ....++. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~-------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~ 67 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLW-------KNRVRVAIKILKSDDL--LKQQDFQ--------KEVQALKRLRHKHLISL 67 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEe-------cCCCcEEEEeccccch--hhHHHHH--------HHHHHHhcCCCcchhhe
Confidence 45799999999999999999886 3478899999875432 1122333 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+..++||||+++ +|.++++......++...++.++.||+.||.|||++||+||||||+||++++++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~--~~kl 145 (261)
T cd05148 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL--VCKV 145 (261)
T ss_pred eeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc--eEEE
Confidence 9999999999999999997 999999865555678888999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ .....++..|++||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 146 ~d~g~~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~-------l~~l~~~g~~ 203 (261)
T cd05148 146 ADFGLARLIKEDVYL-----------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGIL-------LYEMFTYGQV 203 (261)
T ss_pred ccccchhhcCCcccc-----------ccCCCCceEecCHHHHccCCCCchhhHHHHHHH-------HHHHHcCCCC
Confidence 999999864321000 112235667999999988888889999999987 566665 554
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-23 Score=245.97 Aligned_cols=198 Identities=16% Similarity=0.157 Sum_probs=153.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhc-cCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
.++|++.+.||+|+||.||+|+.... +....++..+|+|.+.... ......++. +|+.+++.+ +||||+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~i~ 84 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLV--------SEMEMMKMIGKHKNII 84 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHH--------HHHHHHHhhccCCCch
Confidence 56899999999999999998863210 1122345679999876432 222223333 599999999 899999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCcc
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLK 303 (1566)
++++++......|+||||+++ +|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk 164 (304)
T cd05101 85 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164 (304)
T ss_pred heeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 999999999999999999986 9999987421 1235666788899999999999999999999999
Q ss_pred CCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 304 p~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+||+++.++ .+||+|||+++......... ....-.++..|+|||++.+..++...|+|+.|++
T Consensus 165 p~Nili~~~~--~~kl~D~g~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 228 (304)
T cd05101 165 ARNVLVTENN--VMKIADFGLARDVNNIDYYK---------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 228 (304)
T ss_pred cceEEEcCCC--cEEECCCccceecccccccc---------cccCCCCCceeeCchhhccCCCCchhhHHHHHHH
Confidence 9999999888 79999999998654211100 0011124567999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-23 Score=239.63 Aligned_cols=206 Identities=14% Similarity=0.113 Sum_probs=160.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||+||+|.+ .++..+|+|.+...........+... ...+|+++|+.++|+||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-------~~~~~~avk~~~~~~~~~~~~~~~~~----~~~~e~~~l~~l~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-------NQGQLIAVKQVELDTSNVLAAEKEYE----KLQEEVDLLKSLKHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEE-------cCCCeEEEEEeecCccchhhHHHHHH----HHHHHHHHHHhcCCCCEeeEee
Confidence 488899999999999998763 46788999998754322111111111 1126999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+..|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||+.+|+|+||||+||+++.++ .+||+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 145 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLID 145 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC--eEEecc
Confidence 99999999999999987 99999973 34578888999999999999999999999999999999999888 699999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++.......... . ........++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 146 fg~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~-------~~~l~~g~~p 207 (265)
T cd06631 146 FGCARRLAWVGLHGT----H-SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCT-------VFEMATGKPP 207 (265)
T ss_pred chhhHhhhhcccccc----c-cccccccCCCccccChhhhcCCCCcchhhHHHHHHH-------HHHHHhCCCc
Confidence 999885431110000 0 001122347889999999998888899999999987 6667777653
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-23 Score=248.17 Aligned_cols=197 Identities=17% Similarity=0.162 Sum_probs=150.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.+.- .....+++.||||++..... ......++ +|+.+|.++ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-HSEHRALM--------SELKILIHIGHHLNVVN 75 (343)
T ss_pred hhHhcccccccCCccceEEEEeecc-CCccccceeEEEEEeccCCC-hHHHHHHH--------HHHHHHHhccCCccHhh
Confidence 4589999999999999999987421 11235678999999875322 12222333 599999999 6899999
Q ss_pred cccccccc-CceeeeccCCcc-chhhhhccCc------------------------------------------------
Q 000399 240 VLGLLKTS-GLITSVIPKTPY-TLENILQFSP------------------------------------------------ 269 (1566)
Q Consensus 240 l~~~~~~~-~~l~LV~E~~~g-sL~~~l~~~~------------------------------------------------ 269 (1566)
+++++... ..+++||||+++ +|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 99988654 578999999997 9999886321
Q ss_pred -----------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcccccc
Q 000399 270 -----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 332 (1566)
Q Consensus 270 -----------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~ 332 (1566)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~--~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC--cEEEEecccccccccCc
Confidence 01245666778999999999999999999999999999999888 79999999998643211
Q ss_pred ccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 333 WCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
... ......++..|+|||.+.+..++...|+|+.|++
T Consensus 234 ~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 270 (343)
T cd05103 234 DYV---------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 270 (343)
T ss_pred chh---------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHH
Confidence 100 0112235667999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.1e-23 Score=238.35 Aligned_cols=207 Identities=18% Similarity=0.198 Sum_probs=161.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc---cccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ---ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~---~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+........ ...+... ...+|+.++++++||||++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~----~~~~e~~~l~~l~h~~i~~ 70 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNA------SSGELMAVKQVELPSVSASSKDRKRSMLD----ALAREIALLKELQHENIVQ 70 (267)
T ss_pred CccccceeecCCCeEEEEEEec------CCCcEEEEEEecCCCcccchhHHHHHHHH----HHHHHHHHHHhcCCCCeee
Confidence 4788899999999999998853 4578899998875433221 1111111 1126999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++...+..++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++|++||||||+||++++++ .+|
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~--~~~ 146 (267)
T cd06628 71 YLGSSLDADHLNIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG--GIK 146 (267)
T ss_pred EEEEEEeCCccEEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC--CEE
Confidence 99999999999999999987 99999973 35578888999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++............ .......|+..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 147 l~dfg~~~~~~~~~~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 211 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTN-----GARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCL-------VVEMLTGKHP 211 (267)
T ss_pred ecccCCCcccccccccCCcc-----ccccccCCCcCccChhHhccCCCCchhhhHHHHHH-------HHHHhhCCCC
Confidence 99999998654211100000 01112347788999999988888889999999988 6777777653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-23 Score=225.09 Aligned_cols=197 Identities=17% Similarity=0.144 Sum_probs=154.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|||+-||+++. ..++..+|+|++.-.. .++.++.+ +|++.-++++||||+++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~------~s~~~~YAlKkI~c~~--~~~~e~~~--------rEid~~rkf~s~~vl~l 83 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKG------LSTGHLYALKKILCHS--QEDIEEAL--------REIDNHRKFNSPNVLRL 83 (302)
T ss_pred CceEEEeeeecCCCceeeeeecc------cCcccchhhheeeccc--hHHHHHHH--------HHHHHHHhhCCcchHHH
Confidence 45899999999999999999885 5789999999987643 23333333 69999999999999999
Q ss_pred cccccccC-----ceeeeccCCc-cchhhhhccCcc--cccchhHHHHHHHHHHHHHHHHhhcc--ccCCCccCCCcccc
Q 000399 241 LGLLKTSG-----LITSVIPKTP-YTLENILQFSPN--ALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLT 310 (1566)
Q Consensus 241 ~~~~~~~~-----~l~LV~E~~~-gsL~~~l~~~~~--~~l~~~~~~~i~~Qil~aL~yLH~~g--IiHrDLKp~NILl~ 310 (1566)
+++...+. ..||+++|.. |+|.+.+...+. ..+++.++..|+.+|++||++||+.. ++||||||.|||++
T Consensus 84 ~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls 163 (302)
T KOG2345|consen 84 VDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS 163 (302)
T ss_pred HHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec
Confidence 99876543 5999999876 699999986433 35899999999999999999999999 99999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccCCCCCCceeeee-cCCccccccccccccc---ccchhhcccccccccc
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCI-EGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~-~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~i 378 (1566)
+.+ .++|.|||.++.....-.... ...+...+. +.| |..|+|||++. +...++.+|+|+.||.
T Consensus 164 ~~~--~~vl~D~GS~~~a~i~i~~~~-~a~~lQe~a~e~C--t~pyRAPELf~vk~~~ti~ertDIWSLGCt 230 (302)
T KOG2345|consen 164 DSG--LPVLMDLGSATQAPIQIEGSR-QALRLQEWAEERC--TIPYRAPELFNVKSHCTITERTDIWSLGCT 230 (302)
T ss_pred CCC--ceEEEeccCccccceEeechH-HHHHHHHHHHHhC--CCcccCchheecccCcccccccchhhhhHH
Confidence 988 799999999986543111100 011111121 222 45699999996 4456789999999987
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-23 Score=241.40 Aligned_cols=198 Identities=18% Similarity=0.194 Sum_probs=158.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc--ccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~--~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+|++.+.||+|+||.||+|.+. .++..+|+|.+....... ......+ .+|+.+++.++||||+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~~-------~~e~~~l~~~~h~~i~~~ 67 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDK------ETGRIVAIKKIKLGERKEAKDGINFTA-------LREIKLLQELKHPNIIGL 67 (298)
T ss_pred CceeeeeeeeccccEEEEEEEC------CCCcEEEEEEEeccccccccchhhHHH-------HHHHHHHhhcCCCCChhh
Confidence 4888999999999999998853 468899999987654321 1111111 258999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.+.+.+++||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--~~~l~ 144 (298)
T cd07841 68 LDVFGHKSNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--VLKLA 144 (298)
T ss_pred hheeecCCEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC--CEEEc
Confidence 99999999999999999779999997432 3578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++........ .....+++.|+|||.+.+ ..++...|+|+.|++ .+..+.|.+
T Consensus 145 dfg~~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i-------l~e~~~g~~ 201 (298)
T cd07841 145 DFGLARSFGSPNRK-----------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCI-------FAELLLRVP 201 (298)
T ss_pred cceeeeeccCCCcc-----------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHH-------HHHHHcCCc
Confidence 99999864421100 011235778999998854 456788999999987 666766754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-23 Score=241.97 Aligned_cols=197 Identities=15% Similarity=0.154 Sum_probs=152.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|.+.- ......+..+|+|++..... ......+. +|+.++..++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~~~~l~h~~iv~~ 73 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFG-TAPGEQTQAVAIKTLKDKAE-GPLREEFK--------HEAMMRSRLQHPNIVCL 73 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEec-CCCCCceeEEEEEEccCCCC-HHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 3578999999999999999987421 11123567899999874321 11112222 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccC--------------cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--------------~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
++++.+.+..++++||+++ +|.+++... ....++...+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~ 153 (283)
T cd05091 74 LGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATR 153 (283)
T ss_pred EEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 9999999999999999986 999888521 1224677778899999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||++++++ .+||+|||+++........ .......+++.|+|||.+.+..++...|+|+.|++
T Consensus 154 Nil~~~~~--~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 215 (283)
T cd05091 154 NVLVFDKL--NVKISDLGLFREVYAADYY---------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVV 215 (283)
T ss_pred heEecCCC--ceEecccccccccccchhe---------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHH
Confidence 99999888 6999999999864421110 00112235678999999988888899999999987
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-23 Score=239.56 Aligned_cols=203 Identities=16% Similarity=0.132 Sum_probs=156.4
Q ss_pred ccc-ccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y-~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++| ++++.||+|+||+||++... .....++..+|+|.+..... ......+. +|+++|+.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~~~vaiK~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~i~~~ 71 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYD--PANDGTGEMVAVKTLKRECG-QQNTSGWK--------KEINILKTLYHENIVKY 71 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEc--cccCCCCceEEEEEeccccC-hHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 345 89999999999999765421 11235678899999875421 12223333 59999999999999999
Q ss_pred ccccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++... ..+|+||||+++ +|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~ 146 (283)
T cd05080 72 KGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR--LV 146 (283)
T ss_pred EEEEecCCCceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC--cE
Confidence 9987653 468999999997 99999873 3478899999999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++......... . ......++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 147 ~l~dfg~~~~~~~~~~~~-----~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~-------l~el~tg~~p 209 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYY-----R---VREDGDSPVFWYAVECLKENKFSYASDVWSFGVT-------LYELLTHCDS 209 (283)
T ss_pred EEeecccccccCCcchhh-----c---cCCCCCCCceeeCHhHhcccCCCcccccHHHHHH-------HHHHHhCCCC
Confidence 999999998644211100 0 0011235567999999988888999999999987 6777777653
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-23 Score=245.38 Aligned_cols=198 Identities=18% Similarity=0.204 Sum_probs=152.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhh--ccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCV--LGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~--~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
.++|++.+.||+|+||.||+|.++ .++. .+|+|.+... .......++. +|+.++.++ +||||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~------~~~~~~~~~ik~~~~~-~~~~~~~~~~--------~Ei~~l~~l~~h~~i 70 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNI 70 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEc------cCCceeeEEEEEeccc-CCHHHHHHHH--------HHHHHHHHhcCCCCc
Confidence 458999999999999999998853 2343 4566665432 1112222333 589999999 89999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCc
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDL 302 (1566)
+++++++.+++..|+||||+++ +|.++++... ...+++..++.++.||+.||+|||++||+||||
T Consensus 71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl 150 (303)
T cd05088 71 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDL 150 (303)
T ss_pred ceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 9999999999999999999986 9999987422 124678889999999999999999999999999
Q ss_pred cCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCch
Q 000399 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 303 Kp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfe 382 (1566)
||+|||++.++ .+||+|||+++...... .. ....++..|+|||.+.+..++...|+|+.|++
T Consensus 151 kp~Nili~~~~--~~kl~dfg~~~~~~~~~------~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i---- 212 (303)
T cd05088 151 AARNILVGENY--VAKIADFGLSRGQEVYV------KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL---- 212 (303)
T ss_pred chheEEecCCC--cEEeCccccCcccchhh------hc------ccCCCcccccCHHHHhccCCcccccchhhhhH----
Confidence 99999999988 79999999987422100 00 01123556999999988888899999999987
Q ss_pred hhhHHHhhc-ccc
Q 000399 383 YLLFLNKLA-GRR 394 (1566)
Q Consensus 383 yL~~ln~~a-grs 394 (1566)
.+..++ |+.
T Consensus 213 ---l~ellt~g~~ 222 (303)
T cd05088 213 ---LWEIVSLGGT 222 (303)
T ss_pred ---HHHHHhcCCC
Confidence 555554 543
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-23 Score=236.01 Aligned_cols=199 Identities=19% Similarity=0.175 Sum_probs=162.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+|+.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRK------ADQKLVIIKQIPVEQMTKDERLAAQ--------NECQVLKLLSHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEc------CCCcEEEEEEEeccccccHHHHHHH--------HHHHHHhhCCCCchhheee
Confidence 5889999999999999988753 4688899999876544333333344 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+..++||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~~l~d 145 (256)
T cd08220 67 NFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM-VVKIGD 145 (256)
T ss_pred eEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEcc
Confidence 99999999999999987 9999997544445788889999999999999999999999999999999986652 589999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... .....++..|+|||.+.+..++.+.|+|+.|++ .+..++|+.+
T Consensus 146 ~~~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~-------l~~l~~~~~~ 200 (256)
T cd08220 146 FGISKILSSKSK------------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCV-------LYELASLKRA 200 (256)
T ss_pred CCCceecCCCcc------------ccccccCCcccCchhccCCCCCcccchHHHHHH-------HHHHHhCCCC
Confidence 999986442100 112347788999999988888889999999987 5666666654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-23 Score=240.95 Aligned_cols=197 Identities=15% Similarity=0.098 Sum_probs=153.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++.. .....+..+|+|.+..... .....++. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~aik~~~~~~~-~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGV-VKGEPETRVAIKTVNENAS-MRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEecc-CCCCcceeEEEEecCCccC-HHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 45899999999999999998875311 1123457899999764321 12222343 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
++++......|+||||+++ +|.+++.... ...++...+..++.|++.||.|||+++|+||||||+||+++.
T Consensus 75 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~ 154 (277)
T cd05032 75 LGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC
Confidence 9999999999999999985 9999986421 122456678889999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
++ .+||+|||+++......... . .....++..|+|||.+.+..++...|+|+.|++
T Consensus 155 ~~--~~kl~dfg~~~~~~~~~~~~-~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 210 (277)
T cd05032 155 DL--TVKIGDFGMTRDIYETDYYR-K--------GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210 (277)
T ss_pred CC--CEEECCcccchhhccCcccc-c--------CCCCCccccccCHHHHhcCCCCcccchHHHHHH
Confidence 98 79999999998543211100 0 011225677999999988888899999999987
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=5e-23 Score=243.35 Aligned_cols=208 Identities=14% Similarity=0.120 Sum_probs=161.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++.+.||+|+||.||++.++ ..+..||+|.+.+....... ...+. +|+++++.++||||++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 67 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHK------ETRQRFAMKKINKQNLILRNQIQQVF--------VERDILTFAENPFVVSMF 67 (305)
T ss_pred CceEeeEeecCCCeeEEEEEEC------CCCcEEEEEEeehhhhhhHHHHHHHH--------HHHHHHHhCCCCCeeeeE
Confidence 6899999999999999998863 46788999998765332222 22233 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+++.+|+||||++| +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~--~~~l~ 143 (305)
T cd05609 68 CSFETKRHLCMVMEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG--HIKLT 143 (305)
T ss_pred EEEecCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC--CEEEe
Confidence 999999999999999997 99999973 34578888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccC---CCCCCc-eeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCT---IPTSPM-IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~---~~~~~~-~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++......... ...... .........++..|+|||.+.+..++..+|.|+.|++ .++.++|+.+
T Consensus 144 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~v-------l~el~~g~~p 215 (305)
T cd05609 144 DFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGII-------LYEFLVGCVP 215 (305)
T ss_pred eCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999987422100000 000000 0001112347788999999988888999999999987 6666777643
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.8e-23 Score=242.64 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=162.1
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
....+|++.+.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||+
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~v~ 80 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQP--KKELII--------NEILVMRENKNPNIV 80 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEEC------CCCcEEEEEEEecCCcc--hHHHHH--------HHHHHHHhCCCCCEe
Confidence 34568999999999999999998753 56788999998754322 122233 589999999999999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++.+......|+||||+++ +|.+++.. ..++...+..++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~--~~ 155 (296)
T cd06654 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SV 155 (296)
T ss_pred eEEEEEEeCCEEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--CE
Confidence 999999999999999999987 99998862 3467888899999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++....... ......+++.|+|||.+.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 156 kl~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvi-------l~~l~~g~~p 215 (296)
T cd06654 156 KLTDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM-------AIEMIEGEPP 215 (296)
T ss_pred EECccccchhcccccc-----------ccCcccCCccccCHHHHcCCCCCccchHHHHHHH-------HHHHHhCCCC
Confidence 9999999885432100 0112347889999999988888899999999987 6667778764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-23 Score=238.38 Aligned_cols=191 Identities=18% Similarity=0.201 Sum_probs=153.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||++.. .+..+|+|.+.... ..+.+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--------~~~~~~~k~~~~~~----~~~~~~--------~e~~~l~~l~~~~i~~~ 64 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 64 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--------cCCcEEEEEeCCCc----hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 45899999999999999998763 46778999875432 122333 59999999999999999
Q ss_pred cccc-cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 241 LGLL-KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~-~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++ ...+..|+||||+++ +|.++++......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~k 142 (256)
T cd05082 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN--VAK 142 (256)
T ss_pred EEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC--cEE
Confidence 9976 455679999999986 999999754444577888899999999999999999999999999999999998 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|+|||+++...... ....++..|+|||++.+..++..+|+|+.|++ .+..++ |+.
T Consensus 143 l~dfg~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------~~~l~~~g~~ 198 (256)
T cd05082 143 VSDFGLTKEASSTQ--------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGIL-------LWEIYSFGRV 198 (256)
T ss_pred ecCCccceeccccC--------------CCCccceeecCHHHHccCCCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 99999988543210 01123456999999988888899999999987 555554 554
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-23 Score=240.68 Aligned_cols=204 Identities=14% Similarity=0.129 Sum_probs=159.5
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|.+.+.||+|+||.||++.+.. .....++..+|+|.+.... ......+. +|+.+|++++||||++++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~~~~~~~ik~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 73 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYN-LCPEQDKILVAVKTLKDAS--DNARKDFH--------REAELLTNLQHEHIVKFY 73 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEecc-CCCCCcceEEEEEecCCcC--HHHHHHHH--------HHHHHHHhCCCCCcceEE
Confidence 479999999999999999986421 1112456778999876431 22222333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCc-----------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSP-----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~-----------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
+++...+..++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||||||+|||+
T Consensus 74 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili 153 (288)
T cd05093 74 GVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV 153 (288)
T ss_pred EEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE
Confidence 999999999999999986 9999986321 1247888899999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHh
Q 000399 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
++++ .+||+|||+++....... ......+.++..|+|||++.+..++...|+|+.|++ .+..
T Consensus 154 ~~~~--~~kl~dfg~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i-------l~~l 215 (288)
T cd05093 154 GENL--LVKIGDFGMSRDVYSTDY---------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV-------LWEI 215 (288)
T ss_pred ccCC--cEEeccCCccccccCCce---------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHH-------HHHH
Confidence 9998 799999999985432110 001122345778999999998888999999999987 5566
Q ss_pred hc-ccc
Q 000399 390 LA-GRR 394 (1566)
Q Consensus 390 ~a-grs 394 (1566)
++ |+.
T Consensus 216 ~t~g~~ 221 (288)
T cd05093 216 FTYGKQ 221 (288)
T ss_pred HhCCCC
Confidence 65 544
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.9e-23 Score=241.71 Aligned_cols=211 Identities=18% Similarity=0.185 Sum_probs=160.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++ .++..+|+|.+............+ .+|+++++.++||||+++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~~i~~~ 72 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQI------KTGRVVALKKILMHNEKDGFPITA--------LREIKILKKLKHPNVVPL 72 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCcchhH--------HHHHHHHHhcCCCCccch
Confidence 678999999999999999998863 467889999987643322211222 269999999999999999
Q ss_pred cccccccC--------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 241 LGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 241 ~~~~~~~~--------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
++++.... .+|+||||++++|...+.. ....+++..++.++.|++.||.|||++||+||||||+||+++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~ 151 (311)
T cd07866 73 IDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ 151 (311)
T ss_pred hhheecccccccccCceEEEEEecCCcCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 99875433 5799999999988887763 23458899999999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhc
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+ .+||+|||+++........................+++.|+|||++.+ ..++...|+|+.|++ .+..+.
T Consensus 152 ~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i-------l~el~~ 222 (311)
T cd07866 152 G--ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV-------FAEMFT 222 (311)
T ss_pred C--CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH-------HHHHHh
Confidence 8 799999999986442211111000000011233457888999998754 457888999999987 666667
Q ss_pred cccc
Q 000399 392 GRRW 395 (1566)
Q Consensus 392 grs~ 395 (1566)
|+.+
T Consensus 223 g~~~ 226 (311)
T cd07866 223 RRPI 226 (311)
T ss_pred CCCC
Confidence 7643
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-21 Score=235.27 Aligned_cols=212 Identities=18% Similarity=0.273 Sum_probs=178.4
Q ss_pred cCCCCCCCCCcccccccC-ccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccc
Q 000399 1289 PTPAASWDGPDFLGRVGG-LKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~-D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i 1366 (1566)
++..|.| ||-||. -|.+.||+..+. -+...+||...+++++.+|||+++|||+. ||.|||||..+|-|.
T Consensus 315 ~N~tGDW-----iA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~e----DgKVKvWn~~SgfC~ 385 (893)
T KOG0291|consen 315 FNSTGDW-----IAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAE----DGKVKVWNTQSGFCF 385 (893)
T ss_pred ecccCCE-----EEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccC----CCcEEEEeccCceEE
Confidence 5666887 776664 368999998875 55667899999999999999999999998 999999999999999
Q ss_pred cccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCccccc
Q 000399 1367 SGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1444 (1566)
Q Consensus 1367 ~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1444 (1566)
.+|..|++.|+.+.|+..++.++|. ||+|+.||+...++-++|..+...
T Consensus 386 vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~----------------------------- 436 (893)
T KOG0291|consen 386 VTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPI----------------------------- 436 (893)
T ss_pred EEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCce-----------------------------
Confidence 9999999999999999999988755 999999999999999999765321
Q ss_pred ccccccccchhHHHhhhhhccceEEEEecCc-eEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccc
Q 000399 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNG-SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1445 ~V~svafsp~~~t~v~~~pdg~~L~sgs~Dg-tIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spd 1523 (1566)
...|++-+| .|.++.+|+.|. .|.+|++++|+.+..+.|| .++|.+++|+ |+
T Consensus 437 QfscvavD~----------sGelV~AG~~d~F~IfvWS~qTGqllDiLsGH------EgPVs~l~f~-----------~~ 489 (893)
T KOG0291|consen 437 QFSCVAVDP----------SGELVCAGAQDSFEIFVWSVQTGQLLDILSGH------EGPVSGLSFS-----------PD 489 (893)
T ss_pred eeeEEEEcC----------CCCEEEeeccceEEEEEEEeecCeeeehhcCC------CCcceeeEEc-----------cc
Confidence 223444444 489999999998 5999999999999999987 4556666665 56
Q ss_pred hhHHHhccCCCceeEEeeccC-ceeEEeeccCceeeEeeeeccC
Q 000399 1524 PSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1524 g~~LaSGs~Dg~I~lWD~~sg-k~l~~l~gH~~~V~~VafspdG 1566 (1566)
|..|||||+|.+||+||+-.. ..+.+++ +...|+.|+|+|||
T Consensus 490 ~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG 532 (893)
T KOG0291|consen 490 GSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDG 532 (893)
T ss_pred cCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCC
Confidence 679999999999999999755 3455565 78899999999997
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-21 Score=221.65 Aligned_cols=251 Identities=21% Similarity=0.350 Sum_probs=200.2
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccccee
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVr 1356 (1566)
..|.+.|.+ ++|++.+ +++|+.|+.+.+|++.++ ....+.+|...+.++.|++++..+++++. |+.|+
T Consensus 6 ~~h~~~i~~~~~~~~~~~-----l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----~~~i~ 76 (289)
T cd00200 6 KGHTGGVTCVAFSPDGKL-----LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS----DKTIR 76 (289)
T ss_pred cccCCCEEEEEEcCCCCE-----EEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC----CCeEE
Confidence 358888888 7999887 999999999999999876 56677889999999999999999999998 89999
Q ss_pred eEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccc-----------cCCCC
Q 000399 1357 KWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH-----------GGSPS 1423 (1566)
Q Consensus 1357 lWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~-----------~~~~~ 1423 (1566)
+||+.+++.+..+.+|...|.+++|++++..++++ |+.|++||+++++....+..|...... .+..+
T Consensus 77 i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 156 (289)
T cd00200 77 LWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQD 156 (289)
T ss_pred EEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCC
Confidence 99999988888899999999999999998877655 999999999988888877755432111 11113
Q ss_pred CcccccccCCCC-CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1424 SSISKINTDQVG-MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1424 ~~~~~~~~~~~~-~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
+.+.+|+..... ...+..+...|.++.|+|+ ++.+++++.|+.|++||+++++.+..+..+ ..
T Consensus 157 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~------~~ 220 (289)
T cd00200 157 GTIKLWDLRTGKCVATLTGHTGEVNSVAFSPD----------GEKLLSSSSDGTIKLWDLSTGKCLGTLRGH------EN 220 (289)
T ss_pred CcEEEEEccccccceeEecCccccceEEECCC----------cCEEEEecCCCcEEEEECCCCceecchhhc------CC
Confidence 334444443222 2223345556777777665 888999999999999999999888887655 33
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.+.+++++ +++.++++++.||.|++||+.+++.+..+.+|...|.+++|+|+|
T Consensus 221 ~i~~~~~~-----------~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 273 (289)
T cd00200 221 GVNSVAFS-----------PDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDG 273 (289)
T ss_pred ceEEEEEc-----------CCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCC
Confidence 45556655 445688888889999999999999999999999999999999974
|
|
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-23 Score=243.21 Aligned_cols=197 Identities=14% Similarity=0.084 Sum_probs=151.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|..+. ......+..+|+|.+..... ......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESAS-LRERIEFL--------NEASVMKGFTCHHVVRL 74 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEec-cCCCCcceEEEEEECCCcCC-HHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 4689999999999999999876421 01123456899998764321 12222333 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
++++.+.+..|+||||+++ +|.++++... ....+...++.++.|++.||.|||+++|+||||||+||+++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~ 154 (288)
T cd05061 75 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 154 (288)
T ss_pred EEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC
Confidence 9999999999999999986 9999997421 122345567889999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
++ .+||+|||+++.......... .....++..|+|||.+.+..++...|+|+.|++
T Consensus 155 ~~--~~~L~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~ 210 (288)
T cd05061 155 DF--TVKIGDFGMTRDIYETDYYRK---------GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210 (288)
T ss_pred CC--cEEECcCCccccccccccccc---------cCCCcccccccCHHHhccCCCChHhHHHHHHHH
Confidence 88 799999999985432111000 011224567999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.86 E-value=4e-23 Score=242.36 Aligned_cols=201 Identities=22% Similarity=0.218 Sum_probs=160.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|.++ .++..+|+|.++...........+. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~ni~~ 68 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDK------KTGEIVALKKLKMEKEKEGFPITSL--------REINILLKLQHPNIVT 68 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEEC------CCCcEEEEEEEeeccccccchhhHH--------HHHHHHHhcCCCCEEE
Confidence 3568999999999999999998863 4678899999876433221111222 5899999999999999
Q ss_pred cccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 240 VLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 240 l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
+++++... ...|+||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (293)
T cd07843 69 VKEVVVGSNLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--IL 145 (293)
T ss_pred EEEEEEecCCCcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--cE
Confidence 99998877 8999999999999999887432 3578999999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++....... . .....+++.|+|||.+.+. .++..+|+|+.|++ .+..++|+.+
T Consensus 146 ~l~d~g~~~~~~~~~~------~-----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~-------l~~l~~g~~~ 206 (293)
T cd07843 146 KICDFGLAREYGSPLK------P-----YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCI-------FAELLTKKPL 206 (293)
T ss_pred EEeecCceeeccCCcc------c-----cccccccccccCchhhcCCccccchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999999986442110 0 0112367789999988654 46788999999987 6677777653
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-23 Score=237.68 Aligned_cols=195 Identities=16% Similarity=0.156 Sum_probs=154.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.++||+|+||.||+|++ .+...+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-------~~~~~valK~~~~~~~~---~~~~~--------~E~~~l~~l~~~~i~~~ 66 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTW-------NGTTRVAIKTLKPGTMS---PEAFL--------QEAQVMKKLRHEKLVQL 66 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEe-------cCCceEEEEecccCccC---HHHHH--------HHHHHHHhCCCCCcceE
Confidence 35799999999999999999875 23345899998753321 12343 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+. .+..|+||||+++ +|.+++.......++...++.++.|++.||.|||+++|+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~--~~~L 143 (262)
T cd05071 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 143 (262)
T ss_pred EEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC--cEEe
Confidence 99875 4568999999996 999999754344567888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GR 393 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-gr 393 (1566)
+|||.++........ ......++..|++||...+..++..+|+|+.|++ .+..++ |+
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~-------l~ellt~g~ 201 (262)
T cd05071 144 ADFGLARLIEDNEYT----------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL-------LTELTTKGR 201 (262)
T ss_pred ccCCceeeccccccc----------cccCCcccceecCHhHhccCCCCchhhHHHHHHH-------HHHHHcCCC
Confidence 999999754421100 0112235667999999988889999999999987 556665 54
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.1e-23 Score=238.94 Aligned_cols=196 Identities=15% Similarity=0.148 Sum_probs=155.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||++.+ ..+..+|+|.+..... ....+. +|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~-------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSM---SVEAFL--------AEANVMKTLQHDKLVKL 66 (260)
T ss_pred ccceeEEeEecCccceEEEEEEe-------cCCccEEEEecCCChh---HHHHHH--------HHHHHHHhcCCCCcceE
Confidence 46899999999999999998864 3456689998765322 122333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+.. ...++||||+++ +|.+++.......++...++.++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05073 67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL--VCKI 143 (260)
T ss_pred EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEE
Confidence 999887 788999999986 999999754444567778888999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ......++..|+|||++....++...|.|+.|++ .+..++ |+.
T Consensus 144 ~d~~~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~-------l~~l~t~g~~ 202 (260)
T cd05073 144 ADFGLARVIEDNEYT----------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL-------LMEIVTYGRI 202 (260)
T ss_pred CCCcceeeccCCCcc----------cccCCcccccccCHhHhccCCcCccccchHHHHH-------HHHHHhcCCC
Confidence 999999754321100 0011124566999999988888889999999987 566665 664
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.86 E-value=7e-23 Score=240.33 Aligned_cols=198 Identities=17% Similarity=0.190 Sum_probs=155.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccC----------CcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSG----------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~----------~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~ 230 (1566)
..+|++++.||+|+||.||+|.+....+ ....+..+|+|.+...... ....++. +|+++|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~--------~e~~~l~ 74 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFL--------KEVKILS 74 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHH--------HHHHHHH
Confidence 3579999999999999999887532111 1123466899988754222 2223333 5999999
Q ss_pred cccCCCcccccccccccCceeeeccCCcc-chhhhhccCc---------ccccchhHHHHHHHHHHHHHHHHhhccccCC
Q 000399 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 300 (1566)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~---------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHr 300 (1566)
.++||||+++++++..++..++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~ 154 (296)
T cd05051 75 RLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHR 154 (296)
T ss_pred hcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999986 9999987432 1257888899999999999999999999999
Q ss_pred CccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 301 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 301 DLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||||+||+++.++ .++|+|||+++......... ......+++.|+|||.+.+..++...|+|+.|++
T Consensus 155 dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 221 (296)
T cd05051 155 DLATRNCLVGKNY--TIKIADFGMSRNLYSSDYYR---------VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVT 221 (296)
T ss_pred ccchhceeecCCC--ceEEccccceeecccCccee---------ecCcCCCCceecCHHHhhcCCCCccchhhhhHHH
Confidence 9999999999998 79999999998543211100 1112335678999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.6e-23 Score=246.31 Aligned_cols=203 Identities=21% Similarity=0.298 Sum_probs=160.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++ .++..||+|.+............+. +|+.+|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDT------RSGKKVAIKKIPHAFDVPTLAKRTL--------RELKILRHFKHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEc------CCCCEEEEEEeccccccccchHHHH--------HHHHHHHhcCCCCccCH
Confidence 468999999999999999998863 5688999999875432222222222 59999999999999999
Q ss_pred cccccc----cCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 241 LGLLKT----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 241 ~~~~~~----~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++.. ...+|+||||+.++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~ 145 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLMESDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--E 145 (334)
T ss_pred HHhccccCCCCceEEEEEehhhhhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 998864 347899999999999999873 34588999999999999999999999999999999999999998 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+++......... ........++..|+|||++.+ ..++...|+|+.|++ .+..++|+.+
T Consensus 146 ~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~-------l~el~~g~~p 211 (334)
T cd07855 146 LRIGDFGMARGLSSSPTEH-------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCI-------FAEMLGRRQL 211 (334)
T ss_pred EEecccccceeecccCcCC-------CcccccccccccccChHHhcCCcccccccchHHHHHH-------HHHHHcCCCc
Confidence 9999999997543211110 001122357888999998765 457889999999987 6666777653
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.5e-23 Score=215.71 Aligned_cols=201 Identities=19% Similarity=0.253 Sum_probs=158.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCC-CcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVP-GCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL-~~l~HpNIV~ 239 (1566)
.+....+..||+|+||.|-+.++. .+|.+.|+|.+... ...+..++.+ +|+.+. +....|.+|.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~------~sg~imAvKri~~t-vn~q~q~r~L--------~dldi~~r~~~CPf~V~ 109 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHI------QSGTIMAVKRIRAT-VNSQEQKRLL--------MDLDIIMRTVDCPFTVH 109 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeec------cCCeEEEEeeehhh-cChHHHHHHH--------HhhhhhccCCCCCeEEE
Confidence 346777899999999999988874 78999999998764 3344444444 588875 4457999999
Q ss_pred ccccccccCceeeeccCCccchhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+||.+.....++|.||.|..+|..+-+. ..++.++|..+-.|+..++.||.|||+ ..|||||+||+||||+.+| +
T Consensus 110 FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G--q 187 (282)
T KOG0984|consen 110 FYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG--Q 187 (282)
T ss_pred eehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC--c
Confidence 9999999999999999999888776653 345678999999999999999999998 5899999999999999999 8
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc----ccchhhccccccccccCCchhhhHHHhhcc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~----~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
+||||||++...... ...+ ..++| -.|||||.+. ...|+-..|+|+.|.- .++...+
T Consensus 188 VKiCDFGIsG~L~dS----iAkt-----~daGC---kpYmaPEri~~e~n~~gY~vksDvWSLGIt-------miElA~l 248 (282)
T KOG0984|consen 188 VKICDFGISGYLVDS----IAKT-----MDAGC---KPYMAPERINPELNQKGYSVKSDVWSLGIT-------MIEMAIL 248 (282)
T ss_pred EEEcccccceeehhh----hHHH-----HhcCC---CccCChhhcCcccCcccceeehhhhhhhhh-------hhhhhhc
Confidence 999999999875531 0011 11223 3599999884 3468889999999954 6777777
Q ss_pred cccCC
Q 000399 393 RRWGD 397 (1566)
Q Consensus 393 rs~~d 397 (1566)
|-+.+
T Consensus 249 r~PY~ 253 (282)
T KOG0984|consen 249 RFPYE 253 (282)
T ss_pred ccccc
Confidence 75544
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-23 Score=239.62 Aligned_cols=197 Identities=17% Similarity=0.158 Sum_probs=158.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+ .+...+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~-------~~~~~~~vK~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTW-------NGTTKVAVKTLKPGTMS---PEAFL--------QEAQIMKKLRHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEE-------cCCceEEEEEecCCccC---HHHHH--------HHHHHHhhCCCCCEeee
Confidence 46899999999999999998774 34567899988754322 23344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++......++||||+++ +|.+++.......++...++.++.|++.|+.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~--~~~l 144 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL--VCKI 144 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC--CEEE
Confidence 9999988999999999986 999999754444578888999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ...+..++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 145 ~d~g~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i-------l~~l~t~g~~ 203 (261)
T cd05034 145 ADFGLARLIEDDEYT----------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGIL-------LTEIVTYGRV 203 (261)
T ss_pred Cccccceeccchhhh----------hhhccCCCccccCHHHhccCCcCchhHHHHHHHH-------HHHHHhCCCC
Confidence 999998854321000 0011124567999999988888899999999987 555555 554
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.1e-23 Score=239.71 Aligned_cols=198 Identities=18% Similarity=0.218 Sum_probs=156.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCC-CCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~i-L~~l~HpNIV~l 240 (1566)
++|++++.||+|+||.||+|.++ .++..||+|.+...... ....+++ +|+.+ ++.++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~iv~~ 65 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHV------PTGTIMAVKRIRATVNS-QEQKRLL--------MDLDISMRSVDCPYTVTF 65 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEc------CCCcEEEEEEEecCCCc-HHHHHHH--------HHHHHHHHHcCCCCeeee
Confidence 36899999999999999998863 56899999998764322 2223333 25444 566789999999
Q ss_pred cccccccCceeeeccCCccchhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhc-cccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++..++..|+||||++++|.+++... ....+++..++.++.||+.||.|||++ +++||||||+||+++.++ .+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--~~ 143 (283)
T cd06617 66 YGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--QV 143 (283)
T ss_pred eEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CE
Confidence 9999999999999999999998887642 234578999999999999999999997 999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc----cchhhccccccccccCCchhhhHHHhhccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS----MDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~----~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
||+|||+++..... . ......++..|+|||.+.+ ..++...|.|+.|++ .+..++|+
T Consensus 144 kl~dfg~~~~~~~~-------~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~-------l~~l~~g~ 204 (283)
T cd06617 144 KLCDFGISGYLVDS-------V-----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGIT-------MIELATGR 204 (283)
T ss_pred EEeecccccccccc-------c-----ccccccCCccccChhhcCCcccccccCccccchhhHHH-------HHHHHhCC
Confidence 99999999854310 0 0011236778999998854 456778999999987 67777787
Q ss_pred cc
Q 000399 394 RW 395 (1566)
Q Consensus 394 s~ 395 (1566)
.+
T Consensus 205 ~p 206 (283)
T cd06617 205 FP 206 (283)
T ss_pred CC
Confidence 53
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.9e-23 Score=238.74 Aligned_cols=198 Identities=22% Similarity=0.241 Sum_probs=160.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+. .++..+|+|++............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDR------ETGETVALKKVALRRLEGGIPNQAL--------REIKALQACQHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEEC------CCCceEEEEEEEcccccchhhHHHH--------HHHHHHHhCCCCCCcceee
Confidence 5889999999999999998853 4688999999876543333233344 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++.....+|+||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++ .++|+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~--~~~l~df 143 (286)
T cd07832 67 VFPHGSGFVLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADF 143 (286)
T ss_pred EEecCCeeEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC--cEEEeee
Confidence 999999999999999669999987433 5578899999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+++........ ......++..|+|||++.+. .++.+.|+|+.|++ .+..++|++
T Consensus 144 g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~-------l~~l~tg~~ 199 (286)
T cd07832 144 GLARLFSEEEPR----------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCI-------FAELLNGSP 199 (286)
T ss_pred eecccccCCCCC----------ccccccCcccccCceeeeccccCCchhHHHHHHHH-------HHHHHcCCc
Confidence 999865421110 01112478889999988643 46789999999987 777777754
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.3e-23 Score=236.40 Aligned_cols=200 Identities=20% Similarity=0.167 Sum_probs=161.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|.+. .++..+|+|.++........ ...+. +|+.++++++|+||+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~ei~~l~~~~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL------LDGRVVALKKVQIFEMMDAKARQDCL--------KEIDLLKQLDHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc------CCCCEEEEEEeecccccchhhHHHHH--------HHHHHHHhCCCCCeeee
Confidence 47999999999999999998863 46888999988753332222 23333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++...+..++||||+++ +|.+++... ....+++..++.++.|++.||.|||+.||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~--~~ 145 (267)
T cd08224 68 LASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC--cE
Confidence 9999999999999999996 999988642 234478888999999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+|||+++....... . .....++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 146 ~l~d~~~~~~~~~~~~-----~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 205 (267)
T cd08224 146 KLGDLGLGRFFSSKTT-----A------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL-------LYEMAALQSP 205 (267)
T ss_pred EEeccceeeeccCCCc-----c------cceecCCccccCHHHhccCCCCchhcHHHHHHH-------HHHHHHCCCC
Confidence 9999999875432100 0 011237788999999988888999999999987 6666677643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.4e-23 Score=238.81 Aligned_cols=198 Identities=13% Similarity=0.137 Sum_probs=157.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+.|++.+.||+|+||.||+|.+. .++..+|+|.+.... ....++. +|+.+++.+ +||||++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~---~~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTG---DEEEEIK--------QEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEc------CCCcEEEEEEEEcCC---ccHHHHH--------HHHHHHHHhcCCCCeee
Confidence 457999999999999999988753 568899999986532 1122233 588888888 6999999
Q ss_pred cccccccc------CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 240 VLGLLKTS------GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 240 l~~~~~~~------~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+++++... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||+++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~ 147 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC
Confidence 99998653 468999999996 99999985444567888899999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHH
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFL 387 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~l 387 (1566)
+ .+||+|||+++...... . ......|++.|+|||++. ...|+..+|+|+.|++ .+
T Consensus 148 ~--~~~l~Dfg~~~~~~~~~----~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~-------l~ 207 (272)
T cd06637 148 A--EVKLVDFGVSAQLDRTV----G-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT-------AI 207 (272)
T ss_pred C--CEEEccCCCceeccccc----c-------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHH-------HH
Confidence 8 79999999998543210 0 011234788899999885 3357778999999987 66
Q ss_pred Hhhccccc
Q 000399 388 NKLAGRRW 395 (1566)
Q Consensus 388 n~~agrs~ 395 (1566)
..+.|+.+
T Consensus 208 el~~g~~p 215 (272)
T cd06637 208 EMAEGAPP 215 (272)
T ss_pred HHHhCCCC
Confidence 67777654
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.2e-23 Score=241.75 Aligned_cols=198 Identities=16% Similarity=0.140 Sum_probs=152.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhc-cCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
.++|.+.+.||+|+||.||+|++.-. +.....+..+|+|.+.... ......++. +|+.+++.+ +||||+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLI--------SEMEMMKMIGKHKNII 87 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHH--------HHHHHHHHhcCCCCEe
Confidence 46899999999999999998874210 1112345679999987532 222223333 589999999 799999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCcc
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLK 303 (1566)
++++++...+..|+||||+++ +|.+++.... ...++...++.++.|++.||+|||++|++|||||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 167 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 999999999999999999986 9999997432 1236777888999999999999999999999999
Q ss_pred CCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 304 p~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+||+++.++ .+||+|||+++......... . .....++..|+|||.+.+..++...|+|+.|++
T Consensus 168 p~Nill~~~~--~~kL~dfg~a~~~~~~~~~~-----~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~ 231 (307)
T cd05098 168 ARNVLVTEDN--VMKIADFGLARDIHHIDYYK-----K----TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 231 (307)
T ss_pred HHheEEcCCC--cEEECCCcccccccccchhh-----c----cccCCCccceeChHHhccCCCCcHHHHHHHHHH
Confidence 9999999988 79999999988543211000 0 001123467999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.5e-23 Score=236.72 Aligned_cols=196 Identities=17% Similarity=0.168 Sum_probs=156.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+ ..+..+|+|.+....... ..+. +|+.++++++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~-------~~~~~~~~k~~~~~~~~~---~~~~--------~E~~~l~~l~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTW-------NGNTKVAVKTLKPGTMSP---ESFL--------EEAQIMKKLRHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEe-------cCCceeEEEEecCCCCCH---HHHH--------HHHHHHHhcCCCceEEE
Confidence 45799999999999999998864 356678999987643322 2344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++. .+..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~--~~~l 143 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL--VCKI 143 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc--eEEe
Confidence 99875 4568999999986 999999754444578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ...+..++..|+|||.+.+..++...|.|+.|++ .+..++ |+.
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~~l~~~g~~ 202 (260)
T cd05070 144 ADFGLARLIEDNEYT----------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL-------LTELVTKGRV 202 (260)
T ss_pred CCceeeeeccCcccc----------cccCCCCCccccChHHHhcCCCcchhhhHHHHHH-------HHHHHhcCCC
Confidence 999999754321000 0112234567999999988888899999999987 566665 553
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.6e-23 Score=240.28 Aligned_cols=205 Identities=17% Similarity=0.181 Sum_probs=156.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+.... .......+|+|.+..... .....++. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~-~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 70 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLK-GRAGYTTVAVKMLKENAS-SSELRDLL--------SEFNLLKQVNHPHVIKLYG 70 (290)
T ss_pred CccccccccCcCCcceEEEEEecCC-CCCcceeEEEEecCCCCC-HHHHHHHH--------HHHHHHhhCCCCCEeeEEE
Confidence 4788999999999999998753211 122345688888764322 22223333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc----------------------ccccchhHHHHHHHHHHHHHHHHhhccccC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 299 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~----------------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiH 299 (1566)
.+...+..++||||+++ +|.+++.... ...++...+..++.|++.||.|||+++|+|
T Consensus 71 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH 150 (290)
T cd05045 71 ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVH 150 (290)
T ss_pred EEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 99999999999999996 9999876321 123667788899999999999999999999
Q ss_pred CCccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccC
Q 000399 300 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1566)
Q Consensus 300 rDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~is 379 (1566)
|||||+|||+++++ .+||+|||+++.......... .....++..|+|||.+.+..++...|+|+.|++
T Consensus 151 ~dikp~nill~~~~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~- 218 (290)
T cd05045 151 RDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVK---------RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVL- 218 (290)
T ss_pred hhhhhheEEEcCCC--cEEeccccccccccCccchhc---------ccCCCCCccccCHHHHccCCcchHhHHHHHHHH-
Confidence 99999999999988 799999999985432111000 011235567999999888888999999999987
Q ss_pred CchhhhHHHhhc-cccc
Q 000399 380 NFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 380 nfeyL~~ln~~a-grs~ 395 (1566)
.+..++ |+.+
T Consensus 219 ------l~el~t~g~~p 229 (290)
T cd05045 219 ------LWEIVTLGGNP 229 (290)
T ss_pred ------HHHHHhcCCCC
Confidence 566665 5543
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-23 Score=245.81 Aligned_cols=200 Identities=20% Similarity=0.321 Sum_probs=158.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+. .++..||+|.+..... ......+. +|+.+++.++||||+++
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~niv~~ 68 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHK------PTGVKVAIKKISPFEH-QTFCQRTL--------REIKILRRFKHENIIGI 68 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEc------CCCCeEEEEEeccccc-chhHHHHH--------HHHHHHHhCCCCCcCch
Confidence 468999999999999999998763 5688999999864211 11122233 59999999999999999
Q ss_pred ccccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 241 LGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 241 ~~~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++++... ...|+||||++++|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~-- 143 (336)
T cd07849 69 LDIIRPPSFESFNDVYIVQELMETDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC-- 143 (336)
T ss_pred hheeecccccccceEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--
Confidence 9987544 3589999999999888886 34578889999999999999999999999999999999999998
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||+++......... . ......|++.|+|||.+. ...++...|+|+.|++ .+..++|+.
T Consensus 144 ~~kl~dfg~~~~~~~~~~~~-------~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvi-------l~el~~G~~ 208 (336)
T cd07849 144 DLKICDFGLARIADPEHDHT-------G-FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCI-------LAEMLSNRP 208 (336)
T ss_pred CEEECcccceeecccccccc-------C-CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHH-------HHHHHhCCC
Confidence 79999999998643211100 0 112345788999999864 4567889999999987 677778875
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 209 ~ 209 (336)
T cd07849 209 L 209 (336)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.2e-23 Score=236.45 Aligned_cols=196 Identities=19% Similarity=0.221 Sum_probs=162.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++.+.||.|+||.||+|.+. .++..+|+|.+.+..... ...+.+. +|++++++++||||++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKR------DTKKMFAMKYMNKQKCVEKGSVRNVL--------NERRILQELNHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEc------cCCcEEEEEEEehhhhcchhHHHHHH--------HHHHHHHhCCCCChHHHH
Confidence 4889999999999999998863 468889999998654333 2233333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+....|+||||+.+ +|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||++++++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~l~ 142 (258)
T cd05578 67 YSFQDEENMYLVVDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHIT 142 (258)
T ss_pred HhhcCCCeEEEEEeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC--CEEEe
Confidence 999999999999999987 99999974 34678889999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++....... ......++..|+|||++.+..++...|.|+.|++ .+..++|+.+
T Consensus 143 d~~~~~~~~~~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~-------l~~l~~g~~p 198 (258)
T cd05578 143 DFNIATKVTPDT------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVT-------AYECLRGKRP 198 (258)
T ss_pred ecccccccCCCc------------cccccCCChhhcCHHHHcccCCCCcccchhhHHH-------HHHHHhCCCC
Confidence 999987544210 0112237778999999988888999999999987 6677778754
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.85 E-value=7e-23 Score=242.06 Aligned_cols=206 Identities=18% Similarity=0.167 Sum_probs=160.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||++.+.- ......+..+|+|.+..... ......+. +|+.+++++ +||||++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~~iv~ 103 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYG-LSKSDAVMKVAVKMLKPTAH-SSEREALM--------SELKIMSHLGNHENIVN 103 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEec-CCCCCceeEEEEEecCccCC-hHHHHHHH--------HHHHHHHhccCCCCcce
Confidence 4579999999999999999876411 11123466799998765422 12222333 599999999 7999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++...+..|+||||+++ +|.++++......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 104 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~ 181 (302)
T cd05055 104 LLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK--IVK 181 (302)
T ss_pred EEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC--eEE
Confidence 99999999999999999986 999999743334478889999999999999999999999999999999999888 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|+|||+++....... ........++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 182 l~dfg~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvi-------l~el~t~g~~ 242 (302)
T cd05055 182 ICDFGLARDIMNDSN---------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIL-------LWEIFSLGSN 242 (302)
T ss_pred ECCCcccccccCCCc---------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHH-------HHHHHhCCCC
Confidence 999999985432100 001122346778999999988888999999999987 555555 543
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.7e-23 Score=234.82 Aligned_cols=194 Identities=16% Similarity=0.184 Sum_probs=149.9
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
.||+|+||.||+|..+ ...++..+|+|++...........++. +|+.+++.++||||+++++++. .+
T Consensus 2 ~lg~G~~g~v~~~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~-~~ 68 (257)
T cd05116 2 ELGSGNFGTVKKGMYK----MKKSEKTVAVKILKNDNNDPALKDELL--------REANVMQQLDNPYIVRMIGICE-AE 68 (257)
T ss_pred cCCCcCCcceEEeEEe----cCCCceEEEEEEccCCCCcHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEc-CC
Confidence 6899999999988532 124577899999865433222233344 5899999999999999999875 45
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
..++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++.
T Consensus 69 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~--~~kl~Dfg~~~~ 144 (257)
T cd05116 69 SWMLVMELAELGPLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH--YAKISDFGLSKA 144 (257)
T ss_pred CcEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC--eEEECCCccccc
Confidence 67899999996 89999973 34578889999999999999999999999999999999999988 799999999986
Q ss_pred cccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
........ .......++..|+|||.+....++...|+|+.|++ .+..++ |+.
T Consensus 145 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~el~t~g~~ 197 (257)
T cd05116 145 LGADENYY--------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVL-------MWEAFSYGQK 197 (257)
T ss_pred cCCCCCee--------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHH-------HHHHHhCCCC
Confidence 44211100 00111224578999999988888889999999987 566665 543
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-23 Score=237.91 Aligned_cols=193 Identities=19% Similarity=0.136 Sum_probs=144.1
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||+||+|... .+ .....+|+|.+.... .......++ +|+.+++.++||||+++++.+.+.
T Consensus 1 ~~lg~G~fg~v~~~~~~--~~--~~~~~~~~k~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~nii~~~~~~~~~ 67 (269)
T cd05042 1 DEIGNGWFGKVLLGEAH--RG--MSKARVVVKELRASA-TPDEQLLFL--------QEVQPYRELNHPNVLQCLGQCIES 67 (269)
T ss_pred CcCCccCCceEEEEEEe--cC--CCCeEEEEeecCccC-ChHHHHHHH--------HHHHHHHhCCCCCcceEEEEECCC
Confidence 36999999999987531 11 345567888765432 222223344 588999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcc---cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPN---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~---~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
...|+||||+++ +|.+++..... ...++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~dfg 145 (269)
T cd05042 68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL--SVKIGDYG 145 (269)
T ss_pred CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC--cEEEeccc
Confidence 999999999996 99999974322 2235666788999999999999999999999999999999998 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCcccccccccccccc-------cchhhccccccccccCCchhhhHHHhhc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-------MDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-------~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+++.......... .....++..|+|||++.. ..++...|+|+.|++ .+..++
T Consensus 146 ~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~-------l~el~~ 204 (269)
T cd05042 146 LALEQYPEDYYIT---------KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVT-------MWELFT 204 (269)
T ss_pred cccccccchheec---------cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHH-------HHHHHh
Confidence 9875331100000 011235667999998743 356778999999987 555555
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.1e-23 Score=236.81 Aligned_cols=201 Identities=15% Similarity=0.102 Sum_probs=158.9
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc--cchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES--KNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~--~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+|+..+.||+|+||.||+|.+. .++..+|+|.+.......... .+.+. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~ 69 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDV------DTGRELAAKQVQFDPESPETSKEVSALE-------CEIQLLKNLQHERIVQY 69 (266)
T ss_pred CccccceecCCCCEEEEEEEEc------CCCcEEEEEEeecCcCCchhHHHHHHHH-------HHHHHHHHcCCCCeeeE
Confidence 6899999999999999998753 468899999887543222111 11122 69999999999999999
Q ss_pred cccccc--cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~--~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++.+ ...++++|||+++ +|.+++.. ...+++..++.++.|++.||.|||+++|+||||||+||+++.++ .+
T Consensus 70 ~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~--~~ 145 (266)
T cd06651 70 YGCLRDRAEKTLTIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--NV 145 (266)
T ss_pred EEEEEcCCCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CE
Confidence 999865 3578999999986 99999973 34578888899999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++.......... ......++..|+|||.+.+..++..+|+|+.|++ .+..++|+.+
T Consensus 146 ~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------~~el~~g~~p 208 (266)
T cd06651 146 KLGDFGASKRLQTICMSGT--------GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCT-------VVEMLTEKPP 208 (266)
T ss_pred EEccCCCccccccccccCC--------ccccCCccccccCHHHhCCCCCCchhhhHHHHHH-------HHHHHHCCCC
Confidence 9999999985432111000 0112347788999999988888899999999987 6777778654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=5e-23 Score=236.30 Aligned_cols=183 Identities=19% Similarity=0.168 Sum_probs=153.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.. .+..+|+|.+..... ..+++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 65 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--------RGQKVAVKCLKDDST---AAQAFL--------AEASVMTTLRHPNLVQL 65 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--------cCcEEEEEEeccchh---HHHHHH--------HHHHHHHhcCCcceeee
Confidence 45799999999999999998874 478899999875432 233444 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+..|+||||+++ +|.++++......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~--~~~l 143 (256)
T cd05039 66 LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL--VAKV 143 (256)
T ss_pred EEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC--CEEE
Confidence 9999999999999999996 999999754444678889999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||.++....... ....+..|+|||.+....++...|+|+.|++
T Consensus 144 ~d~g~~~~~~~~~~--------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~i 188 (256)
T cd05039 144 SDFGLAKEASQGQD--------------SGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188 (256)
T ss_pred cccccccccccccc--------------cCCCcccccCchhhcCCcCCcHHHHHHHHHH
Confidence 99999986531100 0113456999999988888889999999987
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-23 Score=238.10 Aligned_cols=202 Identities=15% Similarity=0.077 Sum_probs=156.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|++++.||+|+||.||+|+.. .....++..+|+|.+.... .......+. +|+.+++.++||||+++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 73 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYD--PEGDNTGEQVAVKSLKPES-GGNHIADLK--------KEIEILRNLYHENIVKYKG 73 (284)
T ss_pred hhhhceecCCCCceeEEEEEEc--cCCCCccceEEEEEcCccc-cHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 4789999999999999987632 1123567889999986432 122222333 6999999999999999999
Q ss_pred ccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 243 LLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 243 ~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++... ...++||||+++ +|.+++... ...++...+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~--~~~l 150 (284)
T cd05079 74 ICTEDGGNGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKI 150 (284)
T ss_pred EEecCCCCceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC--CEEE
Confidence 98765 578999999986 999998643 23467888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
+|||+++........ ........++..|+|||.+.+..++..+|+|+.|++ .+..++++
T Consensus 151 ~dfg~~~~~~~~~~~--------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i-------l~ellt~~ 209 (284)
T cd05079 151 GDFGLTKAIETDKEY--------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVT-------LYELLTYC 209 (284)
T ss_pred CCCccccccccCccc--------eeecCCCCCCccccCHHHhccCCCCccccchhhhhh-------hhhhhcCC
Confidence 999999864421110 001123346778999999988888899999999988 45555544
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.9e-23 Score=240.92 Aligned_cols=197 Identities=12% Similarity=0.087 Sum_probs=161.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...+|++++.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||++
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~~ 80 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDI------ATGQEVAIKQMNLQQQP--KKELII--------NEILVMRENKNPNIVN 80 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEEC------CCCCEEEEEEEecCccc--hHHHHH--------HHHHHHHhCCCCCEee
Confidence 3568999999999999999998752 57889999998753322 122233 5889999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++..++..|+||||+++ +|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++.++ .+|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~--~~~ 155 (297)
T cd06656 81 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG--SVK 155 (297)
T ss_pred EEEEEecCCEEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEE
Confidence 99999999999999999987 99998863 3467888899999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++....... ......+++.|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 156 l~Dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvi-------l~~l~tg~~p 214 (297)
T cd06656 156 LTDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM-------AIEMVEGEPP 214 (297)
T ss_pred ECcCccceEccCCcc-----------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 999999875432100 0112347888999999988888899999999988 6667777754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.8e-23 Score=224.94 Aligned_cols=213 Identities=16% Similarity=0.153 Sum_probs=165.5
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
...++.+.+..||.|+.|.|++++.+ .+|.+.|||.+.+. ...++.++++ +.+.++.+. +.|+|
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~r------s~~~iiAVK~M~rt-~Nkee~kRIL--------mDldvv~~s~dcpyI 153 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFR------STGHIIAVKQMRRT-GNKEENKRIL--------MDLDVVLKSHDCPYI 153 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEc------ccceEEEEEeeccc-CCHHHHHHHH--------HhhhHHhhccCCCee
Confidence 34567888999999999999998863 67899999999865 2334444444 477766555 48999
Q ss_pred ccccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhh
Q 000399 238 APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
|+.+|+|.++..+++.||.|...++.+++.. .++++|..+-.+...+++||.||-+ +||||||+||+|||+|+.| .
T Consensus 154 V~c~GyFi~n~dV~IcMelMs~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G--n 230 (391)
T KOG0983|consen 154 VQCFGYFITNTDVFICMELMSTCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--N 230 (391)
T ss_pred eeeeeEEeeCchHHHHHHHHHHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC--C
Confidence 9999999999999999999998888887743 4568999999999999999999997 6899999999999999999 6
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
+|+||||++...... ...+. . .|-+.|||||.+. ...|+-..|+|+.|.- .++..+|+
T Consensus 231 iKlCDFGIsGrlvdS----kAhtr-----s---AGC~~YMaPERidp~~~~kYDiRaDVWSlGIT-------lveLaTg~ 291 (391)
T KOG0983|consen 231 IKLCDFGISGRLVDS----KAHTR-----S---AGCAAYMAPERIDPPDKPKYDIRADVWSLGIT-------LVELATGQ 291 (391)
T ss_pred EEeecccccceeecc----ccccc-----c---cCCccccCccccCCCCCCccchhhhhhhhccc-------hhhhhccc
Confidence 999999999865531 11111 1 2557899999985 4568889999999964 66777777
Q ss_pred ccCCc--cceeecceeE
Q 000399 394 RWGDY--TFHMVMPWVI 408 (1566)
Q Consensus 394 s~~dl--~q~pv~pwv~ 408 (1566)
.+... +.+.++--|+
T Consensus 292 yPy~~c~tdFe~ltkvl 308 (391)
T KOG0983|consen 292 YPYKGCKTDFEVLTKVL 308 (391)
T ss_pred CCCCCCCccHHHHHHHH
Confidence 65433 3344444333
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-22 Score=233.66 Aligned_cols=198 Identities=17% Similarity=0.159 Sum_probs=161.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~~~ 65 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDI------ATGELVAIKVIKLEPGD--DFEIIQ--------QEISMLKECRHPNIVAY 65 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEec------CCCCEEEEEEEEcCchh--hHHHHH--------HHHHHHHhCCCCChhce
Confidence 357999999999999999998863 45678999998754322 222333 69999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+|++|||+++ +|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l 142 (262)
T cd06613 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKL 142 (262)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC--CEEE
Confidence 9999999999999999997 999988742 24578899999999999999999999999999999999999988 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc---chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........ ......++..|+|||++.+. .++..+|+|+.|++ .+.++.|+.+
T Consensus 143 ~d~g~~~~~~~~~~-----------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~-------l~~~~tg~~p 203 (262)
T cd06613 143 ADFGVSAQLTATIA-----------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGIT-------AIELAELQPP 203 (262)
T ss_pred Cccccchhhhhhhh-----------ccccccCCccccCchhhcccccCCcCchhhhHHHHHH-------HHHHHhCCCC
Confidence 99999875432100 01123478889999999776 78889999999987 6777777653
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.9e-23 Score=250.83 Aligned_cols=197 Identities=17% Similarity=0.156 Sum_probs=152.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~ 239 (1566)
.++|.+.+.||+|+||.||+|++.- .+....+..||+|++...... .....++ +|+.+|..+. |||||+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~-~~~~~~~~~vavK~l~~~~~~-~~~~~~~--------~E~~~l~~l~~H~niv~ 105 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHG-LSHSQSTMKVAVKMLKSTARS-SEKQALM--------SELKIMSHLGPHLNIVN 105 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcC-CCCCCCceEEEEEecCCCCCh-hHHHHHH--------HHHHHHHhcCCCCCeEE
Confidence 4578999999999999999987521 011234567999999754222 2122343 5999999997 999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcc------------------------------------------------
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPN------------------------------------------------ 270 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~------------------------------------------------ 270 (1566)
+++++...+.+++||||+++ +|.++++..+.
T Consensus 106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T cd05107 106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE 185 (401)
T ss_pred EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence 99999999999999999996 99999864221
Q ss_pred ------------------------------------------------cccchhHHHHHHHHHHHHHHHHhhccccCCCc
Q 000399 271 ------------------------------------------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1566)
Q Consensus 271 ------------------------------------------------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDL 302 (1566)
..++...+..++.||+.||.|||+++|+||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl 265 (401)
T cd05107 186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL 265 (401)
T ss_pred ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence 12445567789999999999999999999999
Q ss_pred cCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 303 Kp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||+|||++.++ .+||+|||+++......... . .....++..|+|||.+.+..++...|+|+.|++
T Consensus 266 kp~NiLl~~~~--~~kL~DfGla~~~~~~~~~~----~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvi 330 (401)
T cd05107 266 AARNVLICEGK--LVKICDFGLARDIMRDSNYI----S-----KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGIL 330 (401)
T ss_pred CcceEEEeCCC--EEEEEecCcceecccccccc----c-----CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHH
Confidence 99999999887 79999999998543211000 0 011235778999999988888889999999987
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-22 Score=238.63 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=160.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.+.+.||+|+||.||+|.+.. .....++..+++|.+.... ....+.+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYN-LSPTKDKMLVAVKALKDPT--LAARKDFQ--------REAELLTNLQHEHIVKF 72 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeec-cCCCCcceeeEEEecCCcc--HHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 3578999999999999999887421 1122456678888875432 12222333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
++++...+..++||||+++ +|.+++.... .+.++...++.++.||+.||.|||++||+||||||+
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ 152 (291)
T cd05094 73 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR 152 (291)
T ss_pred EEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcc
Confidence 9999999999999999986 9999986421 123677888999999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhh
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
|||++.++ .+||+|||+++........ .......++..|+|||.+.+..++...|+|+.|++
T Consensus 153 Nil~~~~~--~~~l~dfg~a~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i------- 214 (291)
T cd05094 153 NCLVGANL--LVKIGDFGMSRDVYSTDYY---------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI------- 214 (291)
T ss_pred eEEEccCC--cEEECCCCcccccCCCcee---------ecCCCCCcceeecChHHhccCCCCchhhHHHHHHH-------
Confidence 99999988 7999999999854321100 01123346788999999988888889999999987
Q ss_pred HHHhhc-cccc
Q 000399 386 FLNKLA-GRRW 395 (1566)
Q Consensus 386 ~ln~~a-grs~ 395 (1566)
.+..++ |+.+
T Consensus 215 l~el~t~g~~p 225 (291)
T cd05094 215 LWEIFTYGKQP 225 (291)
T ss_pred HHHHHhCCCCC
Confidence 666666 6543
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.5e-23 Score=240.60 Aligned_cols=204 Identities=14% Similarity=0.112 Sum_probs=157.7
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|+..++||+|+||.||++.... .....++..+|+|.+.... ......+. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 73 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHN-LLPEQDKMLVAVKALKEAS--ESARQDFQ--------REAELLTVLQHQHIVRFY 73 (280)
T ss_pred HhceeccccCCccCCeEEEeEEec-CCCCCCceEEEEEecCcCC--HHHHHHHH--------HHHHHHhcCCCCCCceEE
Confidence 478889999999999999876321 1112456778999876432 22222333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcc-------------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPN-------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-------------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NI 307 (1566)
+++...+..++||||+++ +|.+++..... ..++...++.++.|++.|+.|||++||+||||||+||
T Consensus 74 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~ni 153 (280)
T cd05092 74 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNC 153 (280)
T ss_pred EEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhE
Confidence 999999999999999986 99999874321 2367788899999999999999999999999999999
Q ss_pred cccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHH
Q 000399 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 387 (1566)
Q Consensus 308 Ll~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~l 387 (1566)
|+++++ .+||+|||+++........ .......+++.|+|||.+.+..++...|+|+.|++ .+
T Consensus 154 l~~~~~--~~kL~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~ 215 (280)
T cd05092 154 LVGQGL--VVKIGDFGMSRDIYSTDYY---------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV-------LW 215 (280)
T ss_pred EEcCCC--CEEECCCCceeEcCCCcee---------ecCCCccccccccCHHHhccCCcCchhhHHHHHHH-------HH
Confidence 999988 7999999999754321000 01112235678999999988889999999999987 56
Q ss_pred Hhhc-ccc
Q 000399 388 NKLA-GRR 394 (1566)
Q Consensus 388 n~~a-grs 394 (1566)
..++ |+.
T Consensus 216 el~~~g~~ 223 (280)
T cd05092 216 EIFTYGKQ 223 (280)
T ss_pred HHHcCCCC
Confidence 6665 544
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-23 Score=237.82 Aligned_cols=199 Identities=19% Similarity=0.154 Sum_probs=160.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|.+. .++..+|||.+....... ....++. +|+.+++.++||||+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCL------LDGVPVALKKVQIFDLMDAKARADCI--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeec------CCCceEEEEeeeehhhhhHHHHHHHH--------HHHHHHHHccCCchhhh
Confidence 57899999999999999998853 468899999877543222 2223344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++..++..++||||+++ +|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (267)
T cd08229 68 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred hheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--CE
Confidence 9999999999999999997 999988632 234578888999999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|+|||+++....... ......++..|+|||.+.+..++...|+|+.|++ .+..++|..
T Consensus 146 ~l~dfg~~~~~~~~~~-----------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~ 204 (267)
T cd08229 146 KLGDLGLGRFFSSKTT-----------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL-------LYEMAALQS 204 (267)
T ss_pred EECcchhhhccccCCc-----------ccccccCCcCccCHHHhcCCCccchhhHHHHHHH-------HHHHHhCCC
Confidence 9999999875432100 0112247788999999988888889999999987 556666654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.3e-23 Score=243.92 Aligned_cols=210 Identities=17% Similarity=0.171 Sum_probs=162.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
...+.++||+|-||+|.+|.- +.+..||+|.++.+ .......+|+ +|+++|.+|+|||||+|+|
T Consensus 539 ~L~~~ekiGeGqFGEVhLCev-------eg~lkVAVK~Lr~~-a~~~~r~~F~--------kEIkiLsqLkhPNIveLvG 602 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEV-------EGPLKVAVKILRPD-ATKNARNDFL--------KEIKILSRLKHPNIVELLG 602 (807)
T ss_pred heehhhhhcCcccceeEEEEe-------cCceEEEEeecCcc-cchhHHHHHH--------HHHHHHhccCCCCeeEEEe
Confidence 577899999999999999883 45799999999875 3334445666 4999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+|..++.+++|+||+++ +|.+++..+............|+.||++||+||.+.++|||||.+.|+|++.++ ++||||
T Consensus 603 VC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~--~iKiad 680 (807)
T KOG1094|consen 603 VCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF--TIKIAD 680 (807)
T ss_pred eeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc--cEEecC
Confidence 99999999999999995 999999865333333344456999999999999999999999999999999999 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCccce
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFH 401 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~ 401 (1566)
||++|..-..+.+..+.. .+-...|||+|.+.-.+++.+.|.|..|+- -||..+ ...-++|.+++..
T Consensus 681 fgmsR~lysg~yy~vqgr---------~vlpiRwmawEsillgkFttaSDvWafgvT-lwE~~~---~C~e~Py~~lt~e 747 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQGR---------AVLPIRWMAWESILLGKFTTASDVWAFGVT-LWEVFM---LCREQPYSQLTDE 747 (807)
T ss_pred cccccccccCCceeeecc---------eeeeeeehhHHHHHhccccchhhhhhhHHH-HHHHHH---HHhhCchhhhhHH
Confidence 999995432222211111 223456999999888899999999999964 233222 2233556555544
Q ss_pred ee
Q 000399 402 MV 403 (1566)
Q Consensus 402 pv 403 (1566)
.+
T Consensus 748 ~v 749 (807)
T KOG1094|consen 748 QV 749 (807)
T ss_pred HH
Confidence 33
|
|
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-22 Score=236.43 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=151.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhh----ccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCV----LGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~----~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
.++|++++.||+|+||+||+|... .++. .+++|.+... .......++. .|+.+++.++|||
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~------~~~~~~~~~~~~k~~~~~-~~~~~~~~~~--------~~~~~l~~l~h~~ 70 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWI------PEGDSIKIPVAIKTIQDR-SGRQTFQEIT--------DHMLAMGSLDHAY 70 (279)
T ss_pred HhhceeccccCccCCcceEEEEEc------CCCCceeeEEEEeecccc-cchHHHHHHH--------HHHHHHhcCCCCC
Confidence 357999999999999999988742 2333 4666765432 1111122222 4777889999999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
|+++++++.. ...++|+||+++ +|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++.++
T Consensus 71 iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~-- 146 (279)
T cd05111 71 IVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS-- 146 (279)
T ss_pred cceEEEEECC-CccEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--
Confidence 9999998754 567889999985 999999742 34578888999999999999999999999999999999999988
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
.+||+|||+++......... ......++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 147 ~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i-------l~el~t~g~~ 210 (279)
T cd05111 147 IVQIADFGVADLLYPDDKKY---------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVT-------VWEMMSYGAE 210 (279)
T ss_pred cEEEcCCccceeccCCCccc---------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHH-------HHHHHcCCCC
Confidence 79999999998543211100 1112346678999999988889999999999987 555655 554
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.7e-23 Score=239.94 Aligned_cols=198 Identities=18% Similarity=0.188 Sum_probs=158.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|++++.||.|+||.||+|++. .++..+|+|.+... .......+. +|+.+++.++||||+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNK------ETGALAAAKVIETK--SEEELEDYM--------VEIEILATCNHPYIVKL 74 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEEC------CCCceEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCcEeee
Confidence 357999999999999999998863 46788999998653 222233344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+..++.+|+||||+++ +|..++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl 151 (292)
T cd06644 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG--DIKL 151 (292)
T ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC--CEEE
Confidence 9999999999999999997 78777753 234578889999999999999999999999999999999999888 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||++........ ......+++.|+|||++. ...++...|+|+.|++ .+..+.|+.
T Consensus 152 ~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i-------l~el~~g~~ 213 (292)
T cd06644 152 ADFGVSAKNVKTLQ-----------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT-------LIEMAQIEP 213 (292)
T ss_pred ccCccceecccccc-----------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHH-------HHHHhcCCC
Confidence 99999875331100 011223778899999884 3446778999999988 666777765
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 214 p 214 (292)
T cd06644 214 P 214 (292)
T ss_pred C
Confidence 4
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-23 Score=237.79 Aligned_cols=195 Identities=16% Similarity=0.168 Sum_probs=153.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.+ ..+..+|+|.+...... ...+. +|+.+++.++||||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~-------~~~~~~~lK~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~~ 67 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTW-------NGTTKVAIKTLKPGTMM---PEAFL--------QEAQIMKKLRHDKLVPLY 67 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEE-------cCCceEEEEEcccCCcc---HHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 5799999999999999998874 23345899987653221 12333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++. .+..++||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+||++++++ .+||+
T Consensus 68 ~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~--~~~l~ 144 (260)
T cd05069 68 AVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL--VCKIA 144 (260)
T ss_pred EEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--eEEEC
Confidence 9875 4568899999986 999999754444567888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|||+++........ ......++..|+|||...+..++..+|+|+.|++ .+..++ |+.
T Consensus 145 dfg~~~~~~~~~~~----------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~-------l~el~t~g~~ 202 (260)
T cd05069 145 DFGLARLIEDNEYT----------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL-------LTELVTKGRV 202 (260)
T ss_pred CCccceEccCCccc----------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHH-------HHHHHhCCCC
Confidence 99999754321100 0112235667999999988888889999999987 555665 554
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.2e-23 Score=237.54 Aligned_cols=194 Identities=20% Similarity=0.217 Sum_probs=148.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++++.||+|+||+||+|++.- .+ ......||+|.+.... ......++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~-~~-~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIP-DG-ENVKIPVAIKVLRENT-SPKANKEIL--------DEAYVMAGVGSPYVCRL 74 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEec-CC-CccceEEEEEEecCCC-CHHHHHHHH--------HHHHHHHhcCCCCCceE
Confidence 4579999999999999999987421 01 0112347899876432 222223333 58889999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.. ...+++|||+++ +|.++++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+++++ .+||
T Consensus 75 ~~~~~~-~~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~--~~kL 150 (279)
T cd05109 75 LGICLT-STVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN--HVKI 150 (279)
T ss_pred EEEEcC-CCcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC--cEEE
Confidence 999875 457889999986 999998742 34578889999999999999999999999999999999999888 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||+++........ .......++..|++||.+.+..++..+|+|+.|++
T Consensus 151 ~dfG~~~~~~~~~~~---------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 200 (279)
T cd05109 151 TDFGLARLLDIDETE---------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVT 200 (279)
T ss_pred CCCCceeecccccce---------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHH
Confidence 999999865421100 00011124567999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-23 Score=218.56 Aligned_cols=183 Identities=20% Similarity=0.279 Sum_probs=146.5
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 237 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNI 237 (1566)
...++|++++++|+|-|++||.|.. ..+...++||+++.-+. ++.. ||+.||+.|. ||||
T Consensus 35 g~~ddYeivrk~GRGKYSEVFeg~~------~~~~eK~ViKiLKPVkk-----kKIk--------REikIL~nL~gg~NI 95 (338)
T KOG0668|consen 35 GNQDDYEIVRKVGRGKYSEVFEGIN------ITNNEKCVIKILKPVKK-----KKIK--------REIKILQNLRGGPNI 95 (338)
T ss_pred cccchHHHHHHHcCccHhhHhcccc------cCCCceEEEeeechHHH-----HHHH--------HHHHHHHhccCCCCe
Confidence 3467999999999999999999985 35667777888765321 1222 7999999997 9999
Q ss_pred cccccccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 238 APVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 238 V~l~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+.|+++..++ ....||+||+.+ +...+.. .++..+++++++|++.||.|||++||+|||+||.|++|+....
T Consensus 96 i~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~r 170 (338)
T KOG0668|consen 96 IKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELR 170 (338)
T ss_pred eehhhhhcCccccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhc
Confidence 9999999875 467899999998 4444332 3788899999999999999999999999999999999998774
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhcccccccccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~i 378 (1566)
.++|+|.|+|.+.....+ ...+ +.+..|..||++- -..|+-..|+|+.||+
T Consensus 171 -kLrlIDWGLAEFYHp~~e----YnVR--------VASRyfKGPELLVdy~~YDYSLD~WS~Gcm 222 (338)
T KOG0668|consen 171 -KLRLIDWGLAEFYHPGKE----YNVR--------VASRYFKGPELLVDYQMYDYSLDMWSLGCM 222 (338)
T ss_pred -eeeeeecchHhhcCCCce----eeee--------eehhhcCCchheeechhccccHHHHHHHHH
Confidence 899999999997663221 1122 2556789999875 4567888999999997
|
|
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-22 Score=235.45 Aligned_cols=192 Identities=16% Similarity=0.153 Sum_probs=145.8
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|.+.+.||+|+||.||+|.... ......+|+|.+............+. +|+.+|+.++||||++++++
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~ 68 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQ----DDSILKVAVKTMKIAICTRSEMEDFL--------SEAVCMKEFDHPNVMRLIGV 68 (272)
T ss_pred CccccccCcccCceEEEeEEcc----CCCeeeEEEEecccCcCCHHHHHHHH--------HHHHHHHhCCCCCcceEEEE
Confidence 3567899999999999987531 11223689998765433333333344 58999999999999999997
Q ss_pred cccc------CceeeeccCCcc-chhhhhccC----cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 244 LKTS------GLITSVIPKTPY-TLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 244 ~~~~------~~l~LV~E~~~g-sL~~~l~~~----~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+... ...++||||+++ +|.+++... ....+++..+..++.|++.||.|||+++|+||||||+|||++.+
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~ 148 (272)
T cd05075 69 CLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN 148 (272)
T ss_pred EccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC
Confidence 6432 257899999986 998887432 12346788889999999999999999999999999999999988
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+ .+||+|||+++........ . ......+++.|++||.+.+..++...|+|+.|++
T Consensus 149 ~--~~kl~Dfg~~~~~~~~~~~------~---~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~i 203 (272)
T cd05075 149 M--NVCVADFGLSKKIYNGDYY------R---QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVT 203 (272)
T ss_pred C--CEEECCCCcccccCcccce------e---cCCcccCCcccCCHHHccCCCcChHHHHHHHHHH
Confidence 8 7999999999864421100 0 0011235667999999998889999999999987
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-22 Score=250.86 Aligned_cols=201 Identities=15% Similarity=0.155 Sum_probs=165.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+.|++.+.||.|.||.||+++++ .++...|+|++.......++. . .|.++|+.. .|||++.
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~------~~~~~aa~kI~~~~~d~deEi----E-------~eynil~~~~~hpnv~~ 80 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHV------KTGQLAAIKIMDPTEDEEEEI----E-------LEYNMLKKYSHHPNVAT 80 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeee------ecCceeeeEeecCCccccHHH----H-------HHHHHHHhccCCCCcce
Confidence 457999999999999999998863 678889999987643332221 1 377788777 5999999
Q ss_pred ccccccc-----cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKT-----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~-----~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+|++|.. ++.+|||||||.| +.-|+++......+.+..+.+|++.++.|+.+||.+.+||||||-.|||++.++
T Consensus 81 fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 81 FYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA 160 (953)
T ss_pred EEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC
Confidence 9999864 4689999999996 999999977677789999999999999999999999999999999999999999
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHHH
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLN 388 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~ln 388 (1566)
.|||+|||++....... -...+|+|||+|||||++. ...|+..+|.|+.|.. .++
T Consensus 161 --~VKLvDFGvSaQldsT~-----------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGIT-------aIE 220 (953)
T KOG0587|consen 161 --EVKLVDFGVSAQLDSTV-----------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGIT-------AIE 220 (953)
T ss_pred --cEEEeeeeeeeeeeccc-----------ccccCcCCCcccccceeeecccCCCCCcccccchhhccce-------eeh
Confidence 79999999998655211 1234578999999999985 3458889999999976 777
Q ss_pred hhccccc-CCc
Q 000399 389 KLAGRRW-GDY 398 (1566)
Q Consensus 389 ~~agrs~-~dl 398 (1566)
+..|.++ .|+
T Consensus 221 ladG~PPl~Dm 231 (953)
T KOG0587|consen 221 MAEGAPPLCDM 231 (953)
T ss_pred hcCCCCCccCc
Confidence 8778664 443
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-23 Score=241.93 Aligned_cols=186 Identities=18% Similarity=0.200 Sum_probs=159.2
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
...-.+||-|.||+||.|..+ .-...||||.++.+.+ ...+|++ |+.+|+.++|||+|+|+|+
T Consensus 269 ItMkhKLGGGQYGeVYeGvWK------kyslTvAVKtLKEDtM---eveEFLk--------EAAvMKeikHpNLVqLLGV 331 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDTM---EVEEFLK--------EAAVMKEIKHPNLVQLLGV 331 (1157)
T ss_pred eeeeeccCCCcccceeeeeee------ccceeeehhhhhhcch---hHHHHHH--------HHHHHHhhcCccHHHHhhh
Confidence 345678999999999998864 3457799999986543 4567885 9999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
|..+..+|||+|||.+ +|.+||+.+.+..++.-...+++.||.+||+||..+++|||||...|+|+.++. .+||+||
T Consensus 332 CT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh--iVKvADF 409 (1157)
T KOG4278|consen 332 CTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--IVKVADF 409 (1157)
T ss_pred hccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc--eEEeecc
Confidence 9999999999999995 999999998888888888889999999999999999999999999999999998 8999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|++|.+.+..... ..+..-..-|.|||-+....+..+.|+|..|++
T Consensus 410 GLsRlMtgDTYTA----------HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVL 455 (1157)
T KOG4278|consen 410 GLSRLMTGDTYTA----------HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL 455 (1157)
T ss_pred chhhhhcCCceec----------ccCccCcccccCcccccccccccchhhHHHHHH
Confidence 9999877533221 111123345899999999999999999999987
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.6e-23 Score=236.84 Aligned_cols=185 Identities=15% Similarity=0.152 Sum_probs=143.0
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
.||+|+||.||+|.... ...+..+|+|++.... ......++. +|+.+++.++||||+++++++. ..
T Consensus 2 ~ig~G~~g~v~~~~~~~----~~~~~~vavk~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~ii~~~~~~~-~~ 67 (257)
T cd05115 2 ELGSGNFGCVKKGVYKM----RKKQIDVAIKVLKNEN-EKSVRDEMM--------REAEIMHQLDNPYIVRMIGVCE-AE 67 (257)
T ss_pred ccCCCCcccEEEEEEec----CCCceeEEEEEccccc-ChHHHHHHH--------HHHHHHHhcCCCCeEEEEEEEc-CC
Confidence 48999999999876421 1345679999886532 222223343 5999999999999999999885 45
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
..++||||+++ +|.+++... ...+++..++.++.|++.||.|||++|++||||||+|||++.++ .+||+|||+++.
T Consensus 68 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl~dfg~~~~ 144 (257)
T cd05115 68 ALMLVMEMASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH--YAKISDFGLSKA 144 (257)
T ss_pred CeEEEEEeCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC--cEEeccCCcccc
Confidence 78999999986 999998732 34578899999999999999999999999999999999999988 799999999985
Q ss_pred cccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
........ .. .....++..|+|||.+....++...|+|+.|++
T Consensus 145 ~~~~~~~~---~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 187 (257)
T cd05115 145 LGADDSYY---KA-----RSAGKWPLKWYAPECINFRKFSSRSDVWSYGIT 187 (257)
T ss_pred ccCCccce---ec-----cCCCCCCcccCCHHHHccCCCCchhhHHHHHHH
Confidence 33211100 00 011123567999999988888889999999987
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.3e-23 Score=237.89 Aligned_cols=197 Identities=15% Similarity=0.147 Sum_probs=156.7
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|++.+.||+|+||.||+|.+. .++..+++|.+.... ......+. +|+++++.++||||++++
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~ii~~~ 68 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNK------ETGVLAAAKVIDTKS--EEELEDYM--------VEIDILASCDHPNIVKLL 68 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEEC------CCCeEEEEEEeCCCC--HHHHHHHH--------HHHHHHHHCCCCCeeeEE
Confidence 35789999999999999998763 467788999875432 22233344 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|..++.. ....+++..++.++.|++.||.|||+.||+||||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--~~kl~ 145 (282)
T cd06643 69 DAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--DIKLA 145 (282)
T ss_pred EEEeeCCEEEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--CEEEc
Confidence 999999999999999997 88887753 234578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......++..|+|||++. +..++..+|+|+.|++ .+..+.|+.+
T Consensus 146 dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi-------l~el~~g~~p 207 (282)
T cd06643 146 DFGVSAKNTRTIQ-----------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT-------LIEMAQIEPP 207 (282)
T ss_pred ccccccccccccc-----------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHH-------HHHHccCCCC
Confidence 9999875432100 011234788899999983 4456778999999988 5666666643
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=9e-23 Score=240.27 Aligned_cols=199 Identities=18% Similarity=0.191 Sum_probs=151.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|..+. ......+++|.++.. ........+. +|+.++.++ +||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~~hp~iv~~ 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKK----DGLKMNAAIKMLKEF-ASENDHRDFA--------GELEVLCKLGHHPNIINL 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecC----CCCcceeEEEEcccc-CCHHHHHHHH--------HHHHHHHhhcCCCchhhe
Confidence 579999999999999999887521 011234677776532 1122222333 589999889 79999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
++++...+.+|+||||+++ +|.+++.... ...++...++.++.|++.||+|||++||+||||||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~ 148 (297)
T cd05089 69 LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAAR 148 (297)
T ss_pred EEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcc
Confidence 9999999999999999986 9999986422 124677888999999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhh
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
|||++.++ .+||+|||+++...... .. .....+..|+|||.+.+..++...|+|+.|++
T Consensus 149 Nill~~~~--~~kl~dfg~~~~~~~~~------~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i------- 207 (297)
T cd05089 149 NVLVGENL--ASKIADFGLSRGEEVYV------KK------TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVL------- 207 (297)
T ss_pred eEEECCCC--eEEECCcCCCcccccee------cc------CCCCcCccccCchhhccCCCCchhhHHHHHHH-------
Confidence 99999988 79999999987432100 00 00113446999999988889999999999987
Q ss_pred HHHhhc-ccc
Q 000399 386 FLNKLA-GRR 394 (1566)
Q Consensus 386 ~ln~~a-grs 394 (1566)
.+..++ |+.
T Consensus 208 l~el~t~g~~ 217 (297)
T cd05089 208 LWEIVSLGGT 217 (297)
T ss_pred HHHHHcCCCC
Confidence 566664 543
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-23 Score=239.66 Aligned_cols=196 Identities=14% Similarity=0.134 Sum_probs=160.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|+..+.||+|+||.||+|.+. .++..+|+|.+...... .....+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDN------RTKEVVAIKIIDLEEAE-DEIEDIQ--------QEITVLSQCDSPYITRYY 68 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEc------CCCeEEEEEEeccccch-HHHHHHH--------HHHHHHHcCCCCccHhhh
Confidence 46888999999999999998753 46788999987644221 1222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+..+...|+||||+++ +|.+++.. ..+++..++.++.|++.|+.|||++|++|+||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~--~~~l~ 143 (277)
T cd06642 69 GSYLKGTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred cccccCCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC--CEEEc
Confidence 999999999999999997 99988862 3578888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......++..|+|||.+.+..++..+|.|+.|++ .+..+.|+.+
T Consensus 144 dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~el~tg~~p 200 (277)
T cd06642 144 DFGVAGQLTDTQI-----------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGIT-------AIELAKGEPP 200 (277)
T ss_pred cccccccccCcch-----------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHH-------HHHHHhCCCC
Confidence 9999875442100 0112247788999999998888899999999987 6667788775
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-22 Score=234.57 Aligned_cols=201 Identities=14% Similarity=0.104 Sum_probs=158.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccc---cccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~---~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.+|++.+.||+|+||.||+|.+. .++..+|+|.+...... .+....+. +|++++++++||||+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~ei~~l~~l~h~~i~ 67 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDA------DTGRELAVKQVPFDPDSQETSKEVNALE--------CEIQLLKNLRHDRIV 67 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEc------CCCCEEEEEEEecCcccchhhHHHHHHH--------HHHHHHHHcCCCCcc
Confidence 36999999999999999998863 46889999987543211 11112222 699999999999999
Q ss_pred ccccccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 239 PVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 239 ~l~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++++++.+. ..+++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-- 143 (264)
T cd06653 68 QYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG-- 143 (264)
T ss_pred eEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--
Confidence 999998664 468899999987 99999873 34477888899999999999999999999999999999999988
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
.++|+|||+++.......... ......++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 208 (264)
T cd06653 144 NVKLGDFGASKRIQTICMSGT--------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACT-------VVEMLTEKPP 208 (264)
T ss_pred CEEECccccccccccccccCc--------cccccCCcccccCHhhhcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 799999999986542110000 0112347888999999988888889999999987 6667777654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-22 Score=236.49 Aligned_cols=184 Identities=16% Similarity=0.113 Sum_probs=140.4
Q ss_pred eeeecchhhHHHHHhhhccC------------------CcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCC
Q 000399 169 FIGICSYSIFEELASNFLSG------------------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~------------------~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~ 230 (1566)
.||+|+||.||+|......+ .......+|+|++..... ....++. +|+.+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~--------~~~~~~~ 71 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFF--------ETASLMS 71 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHH--------HHHHHHh
Confidence 69999999999987421100 112235578888764321 1122333 5888999
Q ss_pred cccCCCcccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
.++||||+++++++..+...++||||+++ +|..++.. ..+.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 72 ~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill 150 (274)
T cd05076 72 QVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILL 150 (274)
T ss_pred cCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEE
Confidence 99999999999999999999999999997 89888863 23457888889999999999999999999999999999999
Q ss_pred cccch-----hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhcccccccccc
Q 000399 310 TDSCW-----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGEL 378 (1566)
Q Consensus 310 ~~~~~-----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~i 378 (1566)
+..+. ..+|++|||++...... ....++..|+|||.+.+ ..++...|+|+.|++
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~---------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~ 210 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR---------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTT 210 (274)
T ss_pred eccCcccCccceeeecCCccccccccc---------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHH
Confidence 86531 14799999998643210 01125677999998865 567889999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-22 Score=237.95 Aligned_cols=198 Identities=16% Similarity=0.148 Sum_probs=151.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhcc--------CCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLS--------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL 232 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~--------~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l 232 (1566)
..+|++.+.||+|+||.||+|++.-.. ........+|+|.+.... .......+. +|+++|+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~ei~~l~~l 74 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFL--------KEIKIMSRL 74 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHH--------HHHHHHHhC
Confidence 357999999999999999998752100 001123458999886532 222222333 599999999
Q ss_pred cCCCcccccccccccCceeeeccCCcc-chhhhhccCcc----------cccchhHHHHHHHHHHHHHHHHhhccccCCC
Q 000399 233 RHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPN----------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 301 (1566)
Q Consensus 233 ~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~----------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrD 301 (1566)
+||||+++++++...+..++||||+++ +|.+++..... ..++...+..++.|++.||.|||++|++|||
T Consensus 75 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 154 (295)
T cd05097 75 KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD 154 (295)
T ss_pred CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999999999999999999999999997 99998863210 1256677788999999999999999999999
Q ss_pred ccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 302 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 302 LKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+||+++.++ .+||+|||+++....... ........++..|+|||.+.+..++...|+|+.|++
T Consensus 155 lkp~Nill~~~~--~~kl~dfg~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~ 220 (295)
T cd05097 155 LATRNCLVGNHY--TIKIADFGMSRNLYSGDY---------YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVT 220 (295)
T ss_pred cChhhEEEcCCC--cEEecccccccccccCcc---------eeccCcCcCceeecChhhhccCCcCchhhHHHHHHH
Confidence 999999999888 799999999985432100 001112235678999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.9e-23 Score=234.12 Aligned_cols=191 Identities=16% Similarity=0.157 Sum_probs=149.8
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|.. .++..+|+|.+.... .......+. +|+++++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~-------~~~~~~a~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-------KDKTPVAVKTCKEDL-PQELKIKFL--------SEARILKQYDHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEe-------cCCcEEEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCCcCeEEEEEecC
Confidence 3689999999998864 457789999876532 111122333 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
+..++||||+++ +|.+++... ...+.+..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l~d~g~~~ 141 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (250)
T ss_pred CccEEEEECCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC--eEEECCCccce
Confidence 999999999986 999988643 23467888899999999999999999999999999999999988 79999999987
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
........ . .....++..|+|||++.+..++...|+|+.|++ .+..++ |+.
T Consensus 142 ~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~l-------l~~~~~~g~~ 193 (250)
T cd05085 142 QEDDGIYS----S------SGLKQIPIKWTAPEALNYGRYSSESDVWSYGIL-------LWETFSLGVC 193 (250)
T ss_pred eccccccc----c------CCCCCCcccccCHHHhccCCCCchhHHHHHHHH-------HHHHhcCCCC
Confidence 53311000 0 001123566999999988888889999999987 556565 553
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-22 Score=233.47 Aligned_cols=203 Identities=15% Similarity=0.175 Sum_probs=156.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|+..+.||+|+||.||+|++.. .......+|+|.+.... ......++. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 72 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKM---PGRKEVAVAIKTLKPGY-TEKQRQDFL--------SEASIMGQFSHHNIIRLE 72 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEec---CCCCceEEEEEeccccC-CHHHHHHHH--------HHHHHHhcCCCCCeeEEE
Confidence 478889999999999999988531 11234578999886532 122223344 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|.+++... .+.++...+..++.|++.|+.|||++|++||||||+||+++.++ .+||+
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~--~~kl~ 149 (268)
T cd05063 73 GVVTKFKPAMIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL--ECKVS 149 (268)
T ss_pred EEEccCCCcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC--cEEEC
Confidence 999999999999999997 999998742 34578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|||+++......... . .......+..|+|||++.+..++...|+|+.|++ .+..++ |+.
T Consensus 150 dfg~~~~~~~~~~~~------~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~i-------l~ell~~g~~ 209 (268)
T cd05063 150 DFGLSRVLEDDPEGT------Y--TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIV-------MWEVMSFGER 209 (268)
T ss_pred CCccceecccccccc------e--eccCCCcCceecCHHHhhcCCcChHhHHHHHHHH-------HHHHHhCCCC
Confidence 999987544211100 0 0011123456999999988888999999999987 555554 553
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-22 Score=233.41 Aligned_cols=199 Identities=17% Similarity=0.156 Sum_probs=162.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++++. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSK------EDGKQYVIKEINISKMSPKEREESR--------KEVAVLSNMKHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEc------CCCCEEEEEEEEhHhCChHHHHHHH--------HHHHHHHhCCCCCeeeeEe
Confidence 5899999999999999988753 4678899999875433333333444 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++...+..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++|++|+||+|+||+++.++ .++|+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~--~~~l~d 144 (256)
T cd08218 67 SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TIKLGD 144 (256)
T ss_pred eecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEEee
Confidence 99999999999999986 999998754444568888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||++........ ....+.|++.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i-------~~~l~~g~~~ 200 (256)
T cd08218 145 FGIARVLNSTVE-----------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCV-------LYEMCTLKHA 200 (256)
T ss_pred ccceeecCcchh-----------hhhhccCCccccCHHHhCCCCCCCccchhHHHHH-------HHHHHcCCCC
Confidence 999975432100 0112347888999999988888889999999987 6666677654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-22 Score=240.93 Aligned_cols=198 Identities=16% Similarity=0.172 Sum_probs=152.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhc-cCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
.++|.+.+.||+|+||.||+|++... +........+|+|.+.... ......++. +|+.+++.+ +||||+
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv 81 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLI--------SEMELMKLIGKHKNII 81 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhccCCCCee
Confidence 46899999999999999999864210 0112345678999876532 222223334 588999999 699999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCcc
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLK 303 (1566)
++++++...+.+|+||||+++ +|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 161 (314)
T cd05099 82 NLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLA 161 (314)
T ss_pred eEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 999999999999999999986 9999996421 1346777788899999999999999999999999
Q ss_pred CCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 304 p~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+|||++.++ .+||+|||+++......... . .....++..|+|||++.+..++...|+|+.|++
T Consensus 162 p~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~----~-----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 225 (314)
T cd05099 162 ARNVLVTEDN--VMKIADFGLARGVHDIDYYK----K-----TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGIL 225 (314)
T ss_pred ceeEEEcCCC--cEEEcccccccccccccccc----c-----cccCCCCccccCHHHHccCCcCccchhhHHHHH
Confidence 9999999988 79999999998654211100 0 000113457999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-21 Score=243.41 Aligned_cols=212 Identities=22% Similarity=0.381 Sum_probs=181.6
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
...|.+-||+ +...+.. +++||.|+++++||..++ +..++.||.+.|.++...+ ..+++||. |.+|
T Consensus 245 l~GH~g~V~~l~~~~~~~~-----lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~----D~tV 313 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDK-----LVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGSR----DNTV 313 (537)
T ss_pred ccCCCCCceeEEEecCCCE-----EEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC--ceEeeccC----CceE
Confidence 6679999999 3334555 999999999999998876 8999999999999998754 46777777 9999
Q ss_pred eeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCC
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~ 1433 (1566)
++|++.+++++.++.||.++|++|... +..++|| |++|++||+.++++++++.+|
T Consensus 314 kVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH--------------------- 370 (537)
T KOG0274|consen 314 KVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH--------------------- 370 (537)
T ss_pred EEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCC---------------------
Confidence 999999999999999999999999876 7778777 999999999999999999886
Q ss_pred CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCC
Q 000399 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGS 1512 (1566)
Q Consensus 1434 ~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~ 1512 (1566)
+..|.++.+.+. ..+++|+.|++|++||+++. +|+.++.+|.. .|.++.
T Consensus 371 ---------~~~V~sl~~~~~-----------~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~------~v~~l~---- 420 (537)
T KOG0274|consen 371 ---------TGRVYSLIVDSE-----------NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTS------LVSSLL---- 420 (537)
T ss_pred ---------cceEEEEEecCc-----------ceEEeeeeccceEeecCCchhhhhhhhcCCcc------cccccc----
Confidence 455777766541 59999999999999999999 99999998843 333332
Q ss_pred CcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec-cCceeeEeeee
Q 000399 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA-HDGYVTKVRII 1563 (1566)
Q Consensus 1513 ~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g-H~~~V~~Vafs 1563 (1566)
..++.|++++.|+.|++||..+++++.++.+ |.+.|..+++.
T Consensus 421 ---------~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~ 463 (537)
T KOG0274|consen 421 ---------LRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG 463 (537)
T ss_pred ---------cccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC
Confidence 3457899999999999999999999999999 67889888874
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.5e-22 Score=236.17 Aligned_cols=199 Identities=22% Similarity=0.270 Sum_probs=159.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.++ .++..+|+|.+............+. +|+++++.++||||+++++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~v~vK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 67 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNK------ATGEIVAIKKFKESEDDEDVKKTAL--------REVKVLRQLRHENIVNLKE 67 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeC------CCCcEEEEehhhhhcccccchhHHH--------HHHHHHHhcCCCCeeehhh
Confidence 6999999999999999998763 4678999999876433332223333 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++..++..++||||+++++.+.+.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 68 ~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~--~~kl~d~ 144 (288)
T cd07833 68 AFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCDF 144 (288)
T ss_pred eEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEEee
Confidence 9999999999999999854444432 234478889999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+++........ ......++..|+|||++.+. .++...|+|+.|++ .+..+.|+.+
T Consensus 145 g~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~~ 201 (288)
T cd07833 145 GFARALRARPAS----------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCI-------MAELLDGEPL 201 (288)
T ss_pred ecccccCCCccc----------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999865531110 01123477889999999877 78889999999987 6677777653
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-22 Score=243.94 Aligned_cols=197 Identities=16% Similarity=0.147 Sum_probs=150.4
Q ss_pred cccccceeeeecchhhHHHHHhhhc-cCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+|++++.||+|+||.||+|++.-. +........+|+|.+.... ......++. +|+.+++++ +||||++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLV--------SEMEMMKMIGKHKNIIN 82 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 3799999999999999998864210 0111234468999876432 222233344 599999999 7999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccC
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp 304 (1566)
+++++...+.+|+||||+++ +|.+++.... ...++...+..++.|++.||.|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 99999999999999999986 9999987421 12355667788999999999999999999999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||++.++ .+||+|||+++......... ......++..|+|||++.+..++...|+|+.|++
T Consensus 163 ~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 225 (334)
T cd05100 163 RNVLVTEDN--VMKIADFGLARDVHNIDYYK---------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 225 (334)
T ss_pred ceEEEcCCC--cEEECCcccceecccccccc---------cccCCCcCceEcCHHHhccCCcCchhhhHHHHHH
Confidence 999999988 79999999998544211100 0011124567999999998889999999999987
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-22 Score=237.23 Aligned_cols=196 Identities=13% Similarity=0.109 Sum_probs=161.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||.|+||.||+|.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~h~~iv~~ 81 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDV------ATGQEVAIKQINLQKQ--PKKELII--------NEILVMKELKNPNIVNF 81 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEc------CCCcEEEEEEEecccC--chHHHHH--------HHHHHHHhcCCCceeee
Confidence 457999999999999999988753 5788899999865322 1222333 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+..|+|+||+++ +|..++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~--~~kl 156 (296)
T cd06655 82 LDSFLVGDELFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG--SVKL 156 (296)
T ss_pred eeeEecCceEEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999987 99988862 3478889999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++....... ......++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 157 ~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvi-------l~~lltg~~p 214 (296)
T cd06655 157 TDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM-------AIEMVEGEPP 214 (296)
T ss_pred ccCccchhcccccc-----------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99999885432110 0112347888999999988888899999999988 6677778754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-22 Score=236.14 Aligned_cols=208 Identities=15% Similarity=0.057 Sum_probs=156.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|.+.+.||+|+||.||+|.+.. .........+|+|.+.... .......++ +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRG-RDGDAVELQVAVKTLPESC-SEQDESDFL--------MEALIMSKFNHQNIVRL 74 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEec-CCCCCCceeEEEEEcCCCC-CHHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 3579999999999999999987531 0111256778899875432 122223344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcc-----cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN-----ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-----~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
++++.+.+..++||||+++ +|.+++..... ..+++..+..++.||+.||.|||+++++||||||+||+++.++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 75 IGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred EEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCC
Confidence 9999999999999999986 99999864321 24677888999999999999999999999999999999987542
Q ss_pred -hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-c
Q 000399 315 -SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-G 392 (1566)
Q Consensus 315 -~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-g 392 (1566)
..+||+|||+++......... .......+..|+|||++.+..++...|+|+.|++ .+..++ |
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~~g 218 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYYR---------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL-------LWEIFSLG 218 (277)
T ss_pred CcceEeccCccccccCCcccee---------cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH-------HHHHHcCC
Confidence 258999999998653211000 0001123457999999988889999999999988 555554 5
Q ss_pred cc
Q 000399 393 RR 394 (1566)
Q Consensus 393 rs 394 (1566)
+.
T Consensus 219 ~~ 220 (277)
T cd05036 219 YM 220 (277)
T ss_pred CC
Confidence 43
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-22 Score=235.82 Aligned_cols=202 Identities=16% Similarity=0.136 Sum_probs=154.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++++.||+|+||.||+|..+. -...++..+|+|.+.... ......+. +|+++|+.++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~v~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 71 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDP--LQDNTGEVVAVKKLQHST--AEHLRDFE--------REIEILKSLQHDNIVKYK 71 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecC--CcCCCCcEEEEEEeccCC--HHHHHHHH--------HHHHHHHhCCCCCeeEEE
Confidence 378999999999999999875310 012467889999976532 22222333 599999999999999999
Q ss_pred ccccc--cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 242 GLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 242 ~~~~~--~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++.. ...+++||||+++ +|.+++... ...++...++.++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 72 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~--~~~ 148 (284)
T cd05081 72 GVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN--RVK 148 (284)
T ss_pred EEEccCCCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC--eEE
Confidence 98643 3478999999986 999999742 23468888899999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
|+|||+++........ .. ......++..|+|||++.+..++..+|+|+.|++ .+..+.|.
T Consensus 149 l~dfg~~~~~~~~~~~-------~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~el~~~~ 208 (284)
T cd05081 149 IGDFGLTKVLPQDKEY-------YK-VREPGESPIFWYAPESLTESKFSVASDVWSFGVV-------LYELFTYS 208 (284)
T ss_pred ECCCcccccccCCCcc-------ee-ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHH-------HHHHhhcC
Confidence 9999999865421110 00 0011123456999999988888999999999987 55555554
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-22 Score=234.02 Aligned_cols=196 Identities=18% Similarity=0.121 Sum_probs=146.6
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|... ...++..+|+|.+..... ......+. +|+.+++.++||||+++++++.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~----~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~ 67 (269)
T cd05087 1 KEIGNGWFGKVILGEVN----SGYTPAQVVVKELRVSAS-VQEQMKFL--------EEAQPYRSLQHSNLLQCLGQCTEV 67 (269)
T ss_pred CcccccCCceEEEEEEc----CCCCceEEEEEecCCCCC-hHHHHHHH--------HHHHHHHhCCCCCEeeEEEEEcCC
Confidence 46899999999988642 123456789998765421 22223344 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcc---cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPN---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~---~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
...++||||+++ +|.+++..... ...+...++.++.|++.||.|||++|++||||||+||+++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~--~~kL~dfg 145 (269)
T cd05087 68 TPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL--TVKIGDYG 145 (269)
T ss_pred CCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEECCcc
Confidence 999999999996 99999974221 2345556778999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCccccccccccccccc-------chhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-------DWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-------~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+++........ .......++..|+|||++.+. .++.+.|+|+.|++ .+..+. |+.
T Consensus 146 ~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~-------l~el~~~g~~ 208 (269)
T cd05087 146 LSHNKYKEDYY---------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVT-------IWELFELGSQ 208 (269)
T ss_pred ccccccCccee---------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHH-------HHHHHhCCCC
Confidence 98743211000 001122367789999998642 35678999999987 555553 664
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-22 Score=234.93 Aligned_cols=185 Identities=16% Similarity=0.161 Sum_probs=141.0
Q ss_pred eeeeecchhhHHHHHhhhcc------CCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 168 AFIGICSYSIFEELASNFLS------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~------~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.||+|+||.||+|+..... ........+++|.+.... ......+. +|+.+++.++||||++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~l~~l~hp~iv~~~ 70 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFF--------ETASMMRQVSHKHIVLLY 70 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46899999999998742100 011234457788765432 11122233 588899999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-----h
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----S 315 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-----~ 315 (1566)
+++..+...++||||+++ +|..++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++. .
T Consensus 71 ~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 71 GVCVRDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred EEEecCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCc
Confidence 999999999999999997 88777763 2345788889999999999999999999999999999999987652 1
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhcccccccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~i 378 (1566)
.+|++|||++..... ...+.++..|+|||.+. +..++..+|+|+.|++
T Consensus 150 ~~~l~d~g~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~ 198 (262)
T cd05077 150 FIKLSDPGIPITVLS---------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTT 198 (262)
T ss_pred eeEeCCCCCCccccC---------------cccccccccccChhhhcCCCCCCchhHHHHHHHH
Confidence 279999999875331 11234677899999886 5668889999999987
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-22 Score=231.91 Aligned_cols=200 Identities=15% Similarity=0.121 Sum_probs=162.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.++ .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~~~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAK------SDSEHCVIKEIDLTKMPVKEKEASK--------KEVILLAKMKHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEc------CCCceEEEEEeeHhhccchhhHHHH--------HHHHHHHhCCCCChhhhhh
Confidence 5889999999999999998863 4678899999876433333323333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+..|+|+||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||++++++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~~~l~d 145 (257)
T cd08225 67 SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM-VAKLGD 145 (257)
T ss_pred eeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC-eEEecc
Confidence 99999999999999987 9999997544445788889999999999999999999999999999999998762 469999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||.+........ ....+.|++.|+|||.+.+..++...|.|+.|++ .+..+.|+.+
T Consensus 146 ~~~~~~~~~~~~-----------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 201 (257)
T cd08225 146 FGIARQLNDSME-----------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCV-------LYELCTLKHP 201 (257)
T ss_pred cccchhccCCcc-----------cccccCCCccccCHHHHcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999875432100 1123458889999999988788889999999987 5666667643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-22 Score=236.76 Aligned_cols=197 Identities=19% Similarity=0.278 Sum_probs=156.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.++ .++..+|+|.+.+........+.+. +|+++|+.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHK------ETGQIVAIKKFLESEDDKMVKKIAM--------REIRMLKQLRHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEEC------CCCCEEEEEeHhhccCcchhhHHHH--------HHHHHHHhcCCcchhhHH
Confidence 36899999999999999998853 4578899998765433222222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++..|+||||+++ +|..+... ...++...++.++.||+.||.|||++||+||||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~--~~~l~ 142 (286)
T cd07846 67 EVFRRKKRLYLVFEFVDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG--VVKLC 142 (286)
T ss_pred HhcccCCeEEEEEecCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--cEEEE
Confidence 999999999999999998 67666552 23478888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++....... ......++..|+|||++.+ ..++...|+|+.|++ .+..++|++
T Consensus 143 dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~-------l~el~~g~~ 199 (286)
T cd07846 143 DFGFARTLAAPGE-----------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCL-------VTEMLTGEP 199 (286)
T ss_pred eeeeeeeccCCcc-----------ccCcccceeeccCcHHhccccccCchHhHHHHHHH-------HHHHHcCCC
Confidence 9999885432100 0122347788999998865 346678999999987 677777764
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-22 Score=234.71 Aligned_cols=204 Identities=18% Similarity=0.193 Sum_probs=156.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|..+. .+ ......+|+|.+..... .....++. +|+.+|+.++||||+++
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~-~~~~~~~aik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIP-EG-EKVKIPVAIKVLREETS-PKANKEIL--------DEAYVMASVDHPHVVRL 74 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEec-CC-CCcceEEEEEeccCCCC-HHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 3579999999999999999887531 01 11234688888765422 22223333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+ ...++||||+++ +|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 75 ~~~~~~-~~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~--~~kL 150 (279)
T cd05057 75 LGICLS-SQVQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ--HVKI 150 (279)
T ss_pred EEEEec-CceEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC--eEEE
Confidence 999987 789999999986 999999743 33478889999999999999999999999999999999999888 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
+|||+++......... ......++..|+|||.+....++...|.|+.|++ .+..++ |+.+
T Consensus 151 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~-------l~el~~~g~~p 211 (279)
T cd05057 151 TDFGLAKLLDVDEKEY---------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVT-------VWELMTFGAKP 211 (279)
T ss_pred CCCcccccccCcccce---------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHH-------HHHHhcCCCCC
Confidence 9999998654211100 0111224567999999988888899999999987 555555 5543
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-22 Score=237.93 Aligned_cols=216 Identities=13% Similarity=0.015 Sum_probs=146.7
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhh-hcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLR-LIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~-~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+|++.+.||+|+||.||+|.+. .....+..+|+|+...............+ ......+++...+..++|+||+++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~---~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCA---SDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEc---CCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 47999999999999999998752 11111455666653322111100000000 000001123344567789999999
Q ss_pred cccccccC----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 241 LGLLKTSG----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 241 ~~~~~~~~----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++.... ..+++||++..++.+++.. ....++..++.++.|++.||.|||+++|+||||||+|||++.++ .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~--~ 164 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLVENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN--R 164 (294)
T ss_pred EEeeeEecCCceEEEEEEehhccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--c
Confidence 99765543 4578889887777777763 22346777889999999999999999999999999999999888 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+|+.......... .. ........||+.|+|||+..+..++...|+|+.|++ .+..+.|+.+
T Consensus 165 ~~l~DFGla~~~~~~~~~~~-~~---~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~-------l~el~~g~~P 232 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIE-YS---KEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYC-------MLKWAGIKLP 232 (294)
T ss_pred EEEEEcCCceeeccCCcccc-cc---cccccccCCCccccCHHHhCCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 99999999986532111000 00 001122358999999999999999999999999987 5666667543
|
|
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-22 Score=229.75 Aligned_cols=190 Identities=18% Similarity=0.228 Sum_probs=153.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||++. .++..+|+|.+.... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--------~~~~~~~iK~~~~~~----~~~~~~--------~e~~~l~~~~~~~i~~~ 64 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--------YTGQKVAVKNIKCDV----TAQAFL--------EETAVMTKLHHKNLVRL 64 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--------cCCCceEEEeecCcc----hHHHHH--------HHHHHHHhCCCCCcCeE
Confidence 4679999999999999999876 356779999876431 112333 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++..+ ..++||||+++ +|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 65 ~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~--~~kl 141 (254)
T cd05083 65 LGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG--VAKV 141 (254)
T ss_pred EEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--cEEE
Confidence 9998654 57999999986 999999754444578888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++...... .....+..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 142 ~Dfg~~~~~~~~~--------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~-------l~el~~~g~~ 196 (254)
T cd05083 142 SDFGLARVGSMGV--------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVL-------LWEVFSYGRA 196 (254)
T ss_pred CCCccceeccccC--------------CCCCCCceecCHHHhccCCcCchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999987533110 01123456999999988888999999999987 555554 554
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-22 Score=230.26 Aligned_cols=198 Identities=17% Similarity=0.138 Sum_probs=154.2
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|.+.. .......+|+|.+...... ...+++. +|+.++++++||||+++++.+..
T Consensus 1 ~~ig~g~~~~v~~~~~~~---~~~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~- 67 (257)
T cd05040 1 KKLGDGSFGVVRRGEWST---SGGKVIPVAVKCLKSDKLS-DIMDDFL--------KEAAIMHSLDHENLIRLYGVVLT- 67 (257)
T ss_pred CcCCccCcccEEeeeEec---CCCCceEEEEeecCCcccH-HHHHHHH--------HHHHHHhhcCCCCccceeEEEcC-
Confidence 468999999999988631 1123446899998765433 2233343 59999999999999999999988
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
...++||||+++ +|.+++.......++...++.++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~--~~kl~dfg~~~ 145 (257)
T cd05040 68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD--KVKIGDFGLMR 145 (257)
T ss_pred CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCC--EEEeccccccc
Confidence 889999999986 999999754324578888899999999999999999999999999999999998 79999999998
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
......... . ......++..|+|||.+.+..++...|+|+.|++ .+.+++ |+.+
T Consensus 146 ~~~~~~~~~-----~---~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~-------l~el~t~g~~p 200 (257)
T cd05040 146 ALPQNEDHY-----V---MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVT-------LWEMFTYGEEP 200 (257)
T ss_pred cccccccce-----e---cccCCCCCceecCHHHhcccCcCchhhhHHHHHH-------HHHHHhCCCCC
Confidence 654211100 0 0112236677999999988889999999999987 556655 5543
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.3e-22 Score=238.33 Aligned_cols=188 Identities=15% Similarity=0.182 Sum_probs=160.2
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
...++|+++..+|.|+||.||+++++ .++...|+|+++...... -..++ +|+-+++.++|||||
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~------~s~elaavkvVkLep~dd---~~~iq-------qei~~~~dc~h~niv 75 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDK------RSGELAAVKVVKLEPGDD---FSGIQ-------QEIGMLRDCRHPNIV 75 (829)
T ss_pred CCccchhheeeecCCcccchhhhccc------ccCchhhheeeeccCCcc---ccccc-------cceeeeecCCCcChH
Confidence 44678999999999999999999985 578999999988643221 12222 799999999999999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
.+++.+...+.++++||||++ +|.++.+ -.+++++.++.++.++.++|++|||++|-+|||||-.|||+++.+ .+
T Consensus 76 ay~gsylr~dklwicMEycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g--Dv 151 (829)
T KOG0576|consen 76 AYFGSYLRRDKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG--DV 151 (829)
T ss_pred HHHhhhhhhcCcEEEEEecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC--ce
Confidence 999999999999999999997 9999877 567899999999999999999999999999999999999999999 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc---cccchhhccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRGE 377 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l---~~~~y~~~~d~Ws~G~ 377 (1566)
|++|||.+...... -. ....++||++|||||+. ....|...||+|..|.
T Consensus 152 klaDfgvsaqitat-----i~------KrksfiGtpywmapEvaaverkggynqlcdiwa~gi 203 (829)
T KOG0576|consen 152 KLADFGVSAQITAT-----IA------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGI 203 (829)
T ss_pred eecccCchhhhhhh-----hh------hhhcccCCccccchhHHHHHhccccccccccccccc
Confidence 99999998764421 00 12356799999999976 4667899999999993
|
|
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-22 Score=236.48 Aligned_cols=191 Identities=16% Similarity=0.101 Sum_probs=154.9
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
||+|+||+||+|.++ .++..+|+|.+.+....... ...++ +|+.+|+.++||||+++++++...+
T Consensus 1 lg~g~~g~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~~ 66 (277)
T cd05577 1 LGKGGFGEVCACQVK------ATGKMYACKKLDKKRLKKRKGEQMAL--------NEKKILEKVSSRFIVSLAYAFETKD 66 (277)
T ss_pred CCCCCceeEEEEEEc------CCCcEEEEEEEehhhhhhhhhhHHHH--------HHHHHHHhCCCCCEeeeeeEEecCC
Confidence 699999999988753 46889999998764332222 12222 5899999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~~ 144 (277)
T cd05577 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG--NVRISDLGLAVE 144 (277)
T ss_pred eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEccCcchhh
Confidence 99999999996 999998754434688999999999999999999999999999999999999988 799999999875
Q ss_pred cccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..... ......++..|++||.+.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 ~~~~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 193 (277)
T cd05577 145 LKGGK------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCT-------LYEMIAGRSP 193 (277)
T ss_pred hccCC------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHH-------HHHHhhCCCC
Confidence 43200 0112346778999999988788889999999987 5666677754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.5e-23 Score=237.25 Aligned_cols=209 Identities=19% Similarity=0.173 Sum_probs=163.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~ 241 (1566)
+|.+.+.||+|+||.||+|.+. .++..+|+|++.+.........+.+. +|+.++++++ ||||++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~-------~e~~~~~~l~~~~~i~~~~ 68 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEK------ETNKEYAIKILDKRQLIKEKKVKYVK-------IEKEVLTRLNGHPGIIKLY 68 (280)
T ss_pred CceEeeeecCCCceEEEEEEEc------CCCCEEEEEEechHhccchHHHHHHH-------HHHHHHHhcccCCCchhHH
Confidence 6899999999999999998853 47889999998764332222122222 5888999998 99999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..++||||+++ +|.+++.. ...++...++.++.|++.||.|||+.|++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~--~~~l~ 144 (280)
T cd05581 69 YTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM--HIKIT 144 (280)
T ss_pred HHhcCCceEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEec
Confidence 999999999999999965 99999974 34688999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCC---------CCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc
Q 000399 321 DKPLVGFNSIADWCTIP---------TSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~---------~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
|||++............ ...........+.++..|++||++....++...|+|+.|++ .+..++
T Consensus 145 df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~-------l~~l~~ 217 (280)
T cd05581 145 DFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCI-------IYQMLT 217 (280)
T ss_pred CCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHH-------HHHHHh
Confidence 99999865431110000 00000011233457888999999988888889999999977 666677
Q ss_pred cccc
Q 000399 392 GRRW 395 (1566)
Q Consensus 392 grs~ 395 (1566)
|+.+
T Consensus 218 g~~p 221 (280)
T cd05581 218 GKPP 221 (280)
T ss_pred CCCC
Confidence 7764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.9e-22 Score=235.75 Aligned_cols=197 Identities=17% Similarity=0.152 Sum_probs=151.5
Q ss_pred cccccceeeeecchhhHHHHHhhhcc----------CCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC 231 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~ 231 (1566)
++|++.+.||+|+||.||++.+.-.. ....++..+|+|.+.... ......++. +|+.+|+.
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~--------~E~~~l~~ 75 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFL--------KEIKIMSR 75 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHh
Confidence 47999999999999999988642100 112345678999886532 222223344 59999999
Q ss_pred ccCCCcccccccccccCceeeeccCCcc-chhhhhccCcc---------cccchhHHHHHHHHHHHHHHHHhhccccCCC
Q 000399 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPN---------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 301 (1566)
Q Consensus 232 l~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~---------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrD 301 (1566)
++||||+++++++...+..++||||+++ +|.+++..... ..++...+..++.|++.||.|||++||+|||
T Consensus 76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 9999999999999999999999999986 99999874221 1255667899999999999999999999999
Q ss_pred ccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 302 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 302 LKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+|||++.++ .+||+|||+++....... . .......++..|++||...+..++...|+|+.|++
T Consensus 156 lkp~Nili~~~~--~~~l~dfg~~~~~~~~~~------~---~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~ 221 (296)
T cd05095 156 LATRNCLVGKNY--TIKIADFGMSRNLYSGDY------Y---RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVT 221 (296)
T ss_pred CChheEEEcCCC--CEEeccCcccccccCCcc------e---eccCcCcCccccCCHHHHhcCCccchhhhhHHHHH
Confidence 999999999888 799999999985432100 0 00112234567999998887788999999999987
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-22 Score=234.11 Aligned_cols=203 Identities=20% Similarity=0.193 Sum_probs=159.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc----cchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES----KNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~----~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+.......... ....+ ...+|+.+++.++||||+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~----~~~~e~~~l~~l~h~~i~ 71 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNV------TTGEMMAVKQVELPATIAGRHDSRQKDMVK----ALRSEIETLKDLDHLNIV 71 (272)
T ss_pred ceeecceecccCceEEEEEeec------CCCceeeeeeeechhhhhcccchHHHHHHH----HHHHHHHHHHhcCCCCcc
Confidence 5888999999999999998753 468899999886432221110 10111 112589999999999999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++++...+..++||||+++ +|.++++.. +.+++..++.++.||+.||.|||+++++||||||+||+++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--~~ 147 (272)
T cd06629 72 QYLGFETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--IC 147 (272)
T ss_pred eEEEEeccCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC--eE
Confidence 999999999999999999987 999999743 5678888999999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc--hhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++........ .......++..|+|||.+.... ++.+.|+|+.|++ .+..++|+.+
T Consensus 148 ~l~d~~~~~~~~~~~~~---------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~p 211 (272)
T cd06629 148 KISDFGISKKSDDIYDN---------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCV-------VLEMFAGRRP 211 (272)
T ss_pred EEeeccccccccccccc---------cccccccCCccccCHHHhccccCCCCccchhHHHHHH-------HHHHHhCCCC
Confidence 99999999854321000 0112234778899999987654 7889999999987 6677777664
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-22 Score=230.67 Aligned_cols=201 Identities=20% Similarity=0.210 Sum_probs=161.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNL------DTGELMAVKEIRIQDNDPKTIKEIA--------DEMKVLELLKHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEEC------CCCcEEEEEEEECcccchHHHHHHH--------HHHHHHHhCCCCChhheee
Confidence 5889999999999999988752 4678899999876543322333333 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+.+++|+||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~kl~d 142 (264)
T cd06626 67 VEVHREKVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGD 142 (264)
T ss_pred eEecCCEEEEEEecCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999996 99999973 34467888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc---hhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD---WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~---y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||++.......... .. ......++..|++||++.+.. ++...|+|+.|++ .+..+.|+.+
T Consensus 143 ~g~~~~~~~~~~~~---~~----~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~i-------l~~l~~g~~p 205 (264)
T cd06626 143 FGCAVKLKNNTTTM---GE----EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCV-------VLEMATGKRP 205 (264)
T ss_pred cccccccCCCCCcc---cc----cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHH-------HHHHHhCCCC
Confidence 99988654211100 00 011234778899999987765 7889999999987 6677777654
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.5e-23 Score=223.24 Aligned_cols=196 Identities=18% Similarity=0.225 Sum_probs=152.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCC-CCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~i-L~~l~HpNIV~l 240 (1566)
++.+-+..||.|+||+|++-.++ +.|+..|||.+..... ..+.++++ .|.+. ++.-+.||||++
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk------~sg~~mAVKrIr~~n~-~keq~rll--------~e~d~~mks~~cp~IVkf 128 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHK------PSGKLMAVKRIRSNNI-EKEQKRLL--------MEHDTVMKSSNCPNIVKF 128 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcC------ccCcEEEEEEeeeccc-hHHHHHHH--------HHHHHHHhhcCCcHHHHH
Confidence 46677889999999999999875 7899999999987644 23344455 46665 444478999999
Q ss_pred cccccccCceeeeccCCccchhhhhcc---CcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhh
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQF---SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~---~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
||+...++..||.||+|+-+|..+.++ .....++|..+..|....+.||.||-. ..|||||+||+|||++..| .
T Consensus 129 yGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G--~ 206 (361)
T KOG1006|consen 129 YGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG--D 206 (361)
T ss_pred hhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--C
Confidence 999999999999999999877666543 334557888888888889999999987 6899999999999999999 6
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc--ccchhhccccccccccCCchhhhHHHhhccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~--~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
+||||||++.+.... ...+.. . |-..|||||.+. ...|+-..|+|+.|.- +++...|+
T Consensus 207 vKLCDFGIcGqLv~S----iAkT~d-----a---GCrpYmAPERi~p~~~gyDiRSDvWSLGIT-------L~EvAtG~ 266 (361)
T KOG1006|consen 207 VKLCDFGICGQLVDS----IAKTVD-----A---GCRPYMAPERIDPSDKGYDIRSDVWSLGIT-------LYEVATGN 266 (361)
T ss_pred EeeecccchHhHHHH----HHhhhc-----c---CCccccChhccCCccCCcchhhhhhhhcce-------EeeeecCC
Confidence 999999999865531 111111 2 334699999885 3458889999999954 45555554
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-21 Score=232.05 Aligned_cols=270 Identities=17% Similarity=0.255 Sum_probs=202.2
Q ss_pred ccccccccccchHHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeee
Q 000399 1258 PQRRVYDYHKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVA 1334 (1566)
Q Consensus 1258 ~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~sla 1334 (1566)
.|--+|+.+.+.-.. ....|.+.+.+ .||||++ +|||+.||.|+|||...+ |..+|..|+..|+.+.
T Consensus 330 gQLlVweWqsEsYVl-----KQQgH~~~i~~l~YSpDgq~-----iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~ 399 (893)
T KOG0291|consen 330 GQLLVWEWQSESYVL-----KQQGHSDRITSLAYSPDGQL-----IATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQ 399 (893)
T ss_pred ceEEEEEeeccceee-----eccccccceeeEEECCCCcE-----EEeccCCCcEEEEeccCceEEEEeccCCCceEEEE
Confidence 455555554332222 23458888887 7999999 999999999999999988 9999999999999999
Q ss_pred ecCcceEEEeeccCCCcccceeeEEecccccccccccc-cccccceEEeecCCceeec--c-CcEEEeecCCCcEEEEee
Q 000399 1335 VGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH-EEVVNDICVLSSSGRIASC--D-GTLHVWNSQTGKLLSVFA 1410 (1566)
Q Consensus 1335 fspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH-~~~V~sVafsp~g~~LaSg--D-gtIkLWDl~tg~~l~~l~ 1410 (1566)
|+.+++.++|+|. |||||.||+...++-++|... .-.-.||+..|+|..+..| | -.|.+|+++||+.+-.+.
T Consensus 400 f~~~g~~llssSL----DGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLs 475 (893)
T KOG0291|consen 400 FTARGNVLLSSSL----DGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILS 475 (893)
T ss_pred EEecCCEEEEeec----CCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhc
Confidence 9999999999999 999999999999999998764 3456778878888887655 4 469999999999999999
Q ss_pred ccccccccc-----------CCCCCccccccc-CCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEE
Q 000399 1411 EQSMDSLHG-----------GSPSSSISKINT-DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1566)
Q Consensus 1411 ~h~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIr 1478 (1566)
+|.+.+... ++++..+.+|+. +....+....+.+.|+.++|+|+ |+.+++++.||.|.
T Consensus 476 GHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPd----------G~elaVaTldgqIt 545 (893)
T KOG0291|consen 476 GHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPD----------GKELAVATLDGQIT 545 (893)
T ss_pred CCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCC----------CCeEEEEEecceEE
Confidence 988765432 333333444432 11222222334555667777765 99999999999999
Q ss_pred EEEccCCceeeeeccCCcccC---chhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEee
Q 000399 1479 FIDINQGQKLHLWRGEPTELG---FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1566)
Q Consensus 1479 lWDi~tg~~l~~~~~h~~~v~---~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~ 1551 (1566)
+||+..+..+.++.+-....+ ....+++-.......|..+.+|+||..|++|+.++.|++||++++-+++.|+
T Consensus 546 f~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfq 621 (893)
T KOG0291|consen 546 FFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKFQ 621 (893)
T ss_pred EEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeEE
Confidence 999999887766665432110 1222222222233456677888999999999999999999999999988875
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-22 Score=236.00 Aligned_cols=190 Identities=15% Similarity=0.143 Sum_probs=148.6
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCC---CCCCcccCCCccccccccc
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDES---SVPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi---~iL~~l~HpNIV~l~~~~~ 245 (1566)
.||+|+||.||++.+. .++..+|+|.+.+............. +|. .++...+||||+.+++.+.
T Consensus 1 ~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~ 67 (279)
T cd05633 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLAL-------NERIMLSLVSTGDCPFIVCMTYAFH 67 (279)
T ss_pred CcccCCCeEEEEEEEC------CCCcEEEEEEEEccccccchHHHHHH-------HHHHHHHHHhhCCCCcEeEEEEEEe
Confidence 4899999999988752 46889999998765433222111111 233 2344457999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
..+..++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~--~~~l~dfg~ 143 (279)
T cd05633 68 TPDKLCFILDLMNGGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGL 143 (279)
T ss_pred cCCeEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999997 99988873 44588999999999999999999999999999999999999988 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++..... . .....|+..|+|||.+. +..++...|+|+.|++ .+..+.|+.+
T Consensus 144 ~~~~~~~-------~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~-------l~~l~~g~~p 195 (279)
T cd05633 144 ACDFSKK-------K------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCM-------LFKLLRGHSP 195 (279)
T ss_pred ceecccc-------C------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 8743311 0 01124788999999886 4567889999999987 6667777754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.1e-22 Score=237.75 Aligned_cols=191 Identities=15% Similarity=0.181 Sum_probs=155.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
..++.++||+|-||.||+|.... ........||||.-+.+ ......+.|++ |+.+|++++|||||+|+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~--~~kge~iaVAvKtCK~d-~t~d~tekflq--------Ea~iMrnfdHphIikLIG 458 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTD--PEKGERIAVAVKTCKTD-CTPDDTEKFLQ--------EASIMRNFDHPHIIKLIG 458 (974)
T ss_pred hccHHHhhcCCcccceeeeEecc--cccCcceeeeeehhccC-CChhhHHHHHH--------HHHHHHhCCCcchhheee
Confidence 34567889999999999987432 21234556899987764 44455777885 999999999999999999
Q ss_pred cccccCceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+ ...|||||+++ |.|..+|+.++ ..++......|++||+.||.|||+++.|||||...|||+.... -+||+|
T Consensus 459 v~~e-~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~--CVKLaD 534 (974)
T KOG4257|consen 459 VCVE-QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ--CVKLAD 534 (974)
T ss_pred eeec-cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc--eeeecc
Confidence 9965 56899999999 59999998543 3468888889999999999999999999999999999999888 499999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||++|.......+..+ ..+ -..-|||||-++-..++.+.|+|..|+-
T Consensus 535 FGLSR~~ed~~yYkaS-~~k---------LPIKWmaPESINfRrFTtASDVWMFgVC 581 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKAS-RGK---------LPIKWMAPESINFRRFTTASDVWMFGVC 581 (974)
T ss_pred cchhhhccccchhhcc-ccc---------cceeecCccccchhcccchhhHHHHHHH
Confidence 9999987754433221 111 2335999999999999999999999964
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-22 Score=238.44 Aligned_cols=196 Identities=16% Similarity=0.138 Sum_probs=159.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...|++.+.||+|+||.||+|.+. .++..||+|.+........ ...++. +|+.+++.++||||++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~niv~ 79 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQQLRHPNTIE 79 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEc------CCCcEEEEEEEeccccCcHHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 346999999999999999988753 4678999999865432222 222333 5999999999999999
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+++++.+.+..|+||||++++|.+++... ...+++..+..++.|++.||.|||++||+||||+|+||+++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~--~~kL 156 (307)
T cd06607 80 YKGCYLREHTAWLVMEYCLGSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG--TVKL 156 (307)
T ss_pred EEEEEEeCCeEEEEHHhhCCCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC--CEEE
Confidence 99999999999999999999888877632 33578888999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++..... ....+++.|+|||++. ...++...|+|+.|++ .+..+.|+.+
T Consensus 157 ~dfg~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~i-------l~el~tg~~p 213 (307)
T cd06607 157 ADFGSASLVSPA---------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-------CIELAERKPP 213 (307)
T ss_pred eecCcceecCCC---------------CCccCCccccCceeeeccCCCCCCcccchHHHHHH-------HHHHHcCCCC
Confidence 999998753310 1234778899999874 3557789999999987 6677778754
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-22 Score=237.81 Aligned_cols=197 Identities=17% Similarity=0.164 Sum_probs=152.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+.. .....++..+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~ei~~l~~l~h~~iv~~ 73 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPG-LLPYEPFTMVAVKMLKEEA-SADMQADFQ--------REAALMAEFDHPNIVKL 73 (288)
T ss_pred hHhceecccccccccccEEEEEEcc-cCCCCcceeEEEEecCCCc-CHHHHHHHH--------HHHHHHHhcCCCchheE
Confidence 3579999999999999999987531 0012356789999986532 222223344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------------------ccccchhHHHHHHHHHHHHHHHHhhccccC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 299 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiH 299 (1566)
++++...+..++||||+++ +|.+++.... ...+++..+..++.|++.||.|||+++++|
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H 153 (288)
T cd05050 74 LGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVH 153 (288)
T ss_pred EEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9999999999999999996 9999986321 123567778899999999999999999999
Q ss_pred CCccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 300 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 300 rDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||||+||+++.++ .+||+|||+++......... .......+..|+|||.+.+..++...|+|+.|++
T Consensus 154 ~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 221 (288)
T cd05050 154 RDLATRNCLVGENM--VVKIADFGLSRNIYSADYYK---------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVV 221 (288)
T ss_pred ccccHhheEecCCC--ceEECccccceecccCcccc---------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHH
Confidence 99999999999988 79999999987543211000 0111124556999999988889999999999987
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-22 Score=234.62 Aligned_cols=196 Identities=13% Similarity=0.159 Sum_probs=162.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||.|+||.||+|.+. .++..+|+|.+.... .......+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDK------RTNQVVAIKVIDLEE-AEDEIEDIQ--------QEIQFLSQCRSPYITKYY 65 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEEC------CCCeEEEEEEeeccc-cchHHHHHH--------HHHHHHHHcCCCCeeeee
Confidence 36899999999999999998863 468899999987542 122222333 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.++..+|+|+||+++ +|.+++... .+++..++.++.|++.||.|||+++|+||||||+||++++++ .++|+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~ 140 (274)
T cd06609 66 GSFLKGSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG--DVKLA 140 (274)
T ss_pred EEEEECCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEc
Confidence 999999999999999987 999999742 678889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......+++.|+|||.+.+..++..+|+|+.|++ .+..++|+.+
T Consensus 141 d~g~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~i-------l~~l~tg~~p 197 (274)
T cd06609 141 DFGVSGQLTSTMS-----------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGIT-------AIELAKGEPP 197 (274)
T ss_pred ccccceeeccccc-----------ccccccCCccccChhhhccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999986542110 0112347788999999988889999999999988 6777788765
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-22 Score=233.45 Aligned_cols=197 Identities=19% Similarity=0.224 Sum_probs=158.5
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++.+.||+|++|.||+|.++ .++..+|+|++............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDK------LTGEIVALKKIRLETEDEGVPSTAI--------REISLLKELNHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEc------CCCCEEEEEEeecccccccchhHHH--------HHHHHHHhcCCCCccCHhhe
Confidence 678899999999999998863 4788999999876432222222333 59999999999999999999
Q ss_pred ccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
+.+.+..|+||||++++|.+++...+...+++..++.++.|++.||.|||+++++||||+|+||+++.++ .++|+|||
T Consensus 67 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~--~~~l~df~ 144 (283)
T cd07835 67 VHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG--ALKLADFG 144 (283)
T ss_pred eccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--cEEEeecc
Confidence 9999999999999988999998754444578899999999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+++....... . .....++..|+|||++.+. .++...|+|+.|++ .+..++|+.
T Consensus 145 ~~~~~~~~~~-----~------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~-------l~~l~~g~~ 198 (283)
T cd07835 145 LARAFGVPVR-----T------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCI-------FAEMVNRRP 198 (283)
T ss_pred cccccCCCcc-----c------cCccccccCCCCCceeecCcccCcHHHHHHHHHH-------HHHHHhCCC
Confidence 9975431100 0 0111357789999987653 56788999999987 666777754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.1e-23 Score=239.46 Aligned_cols=198 Identities=21% Similarity=0.198 Sum_probs=154.6
Q ss_pred ccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccc
Q 000399 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1566)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~ 244 (1566)
.+.+.||.|+||.||+|...- .....+..|+||.+... .......+++ +|+++|++++||||++++|++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~--~~~~~~~~V~vk~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~~g~~ 70 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ--KDNDKNQPVAVKILKPS-SSEEEEEEFL--------NEIQILRKLRHPNIVKLYGFC 70 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES--TTTSSEEEEEEEEESTT-SSHHHHHHHH--------HHHHHHHTHSBTTBE-EEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc--ccCCCCEEEEEEEeccc-cccccceeee--------ecccccccccccccccccccc
Confidence 356899999999999887531 22345788999998542 2233345566 499999999999999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
...+.+++||||+++ +|.++|.......++......++.||+.||.|||+++|+|+||+++||+++.++ .+||+|||
T Consensus 71 ~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~--~~Kl~~f~ 148 (259)
T PF07714_consen 71 IENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG--QVKLSDFG 148 (259)
T ss_dssp ESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT--EEEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 988889999999985 999999865345678888999999999999999999999999999999999998 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+++........ ...........|+|||.+....++...|+|+.|.+ .+..+.
T Consensus 149 ~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~-------l~ei~~ 200 (259)
T PF07714_consen 149 LSRPISEKSKY---------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGML-------LYEILT 200 (259)
T ss_dssp TGEETTTSSSE---------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHH-------HHHHHT
T ss_pred ccccccccccc---------ccccccccccccccccccccccccccccccccccc-------cccccc
Confidence 99865211000 11222336677999999998889999999999977 667766
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.4e-22 Score=240.39 Aligned_cols=189 Identities=19% Similarity=0.208 Sum_probs=156.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+.|++...+|.|+|+.|-.+.+. .+.+..++|++.+.....+ +|+.++... +||||++
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~------~t~~~~~vkii~~~~~~~~--------------~e~~~~~~~~~h~niv~ 380 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESS------PTDQEPAVKIISKRADDNQ--------------DEIPISLLVRDHPNIVK 380 (612)
T ss_pred chhhccccccCCCCccceeeeecc------ccccchhheeccccccccc--------------cccchhhhhcCCCccee
Confidence 557999999999999999988873 6788899999987633333 588777666 6999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc-cccchhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL-TDSCWSWL 317 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl-~~~~~~~v 317 (1566)
+++.+.+..+.|+|||.+.| .|.+.+...+ .+. ..+..|++||+.|+.|||++|||||||||+|||+ ++.+ ++
T Consensus 381 ~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g--~l 455 (612)
T KOG0603|consen 381 SHDVYEDGKEIYLVMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG--HL 455 (612)
T ss_pred ecceecCCceeeeeehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC--cE
Confidence 99999999999999999997 5555555222 223 6778899999999999999999999999999999 4666 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+|||.++..... +.+. +-|..|.|||++....|+..||+|+.|.+ .+.+++|+++
T Consensus 456 rltyFG~a~~~~~~-------------~~tp-~~t~~y~APEvl~~~~yt~acD~WSLGvl-------Ly~ML~G~tp 512 (612)
T KOG0603|consen 456 RLTYFGFWSELERS-------------CDTP-ALTLQYVAPEVLAIQEYTEACDWWSLGVL-------LYEMLTGRTL 512 (612)
T ss_pred EEEEechhhhCchh-------------hccc-chhhcccChhhhccCCCCcchhhHHHHHH-------HHHHHhCCCc
Confidence 99999999976631 1111 14677999999999999999999999988 8899999986
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-22 Score=231.26 Aligned_cols=203 Identities=16% Similarity=0.118 Sum_probs=162.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||.|+||+||+|... .++..+|+|++....... ....+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICL------PNNEKVAIKRIDLEKCQT-SVDELR--------KEVQAMSQCNHPNVVKYY 65 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEc------CCCcEEEEEEeccCCcch-HHHHHH--------HHHHHHHhcCCCCEEEEE
Confidence 36999999999999999988752 467889999987543322 233333 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcc-cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPN-ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+.+...+..|+|||++++ +|.++++.... ..+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~--~~~l 143 (267)
T cd06610 66 TSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG--SVKI 143 (267)
T ss_pred EEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEEE
Confidence 999999999999999987 99999974322 4578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........... .....+.|+..|++||++... .++..+|.|+.|++ .+..++|+.+
T Consensus 144 ~df~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i-------~~~l~~g~~p 206 (267)
T cd06610 144 ADFGVSASLADGGDRTR-------KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGIT-------AIELATGAAP 206 (267)
T ss_pred cccchHHHhccCccccc-------cccccccCChhhcChHHHccccCcCcccchHhHhHH-------HHHHHhCCCC
Confidence 99999875442111100 011233578899999998766 67889999999988 7777788754
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.9e-22 Score=233.65 Aligned_cols=202 Identities=16% Similarity=0.175 Sum_probs=152.3
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++.+.||+|+||.||+|... ....++..+|||++...........++. +|+.+|+.++||||++++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~---~~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~~ 69 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLK---SEDGSFQKVAVKMLKADIFSSSDIEEFL--------REAACMKEFDHPNVIKLIGV 69 (273)
T ss_pred CcchhcccCCCCCCEEeeEee---ccCCCceEEEEEEeccccCChHHHHHHH--------HHHHHHhcCCCCCcceEEEE
Confidence 677889999999999998752 1224578899999876543333334444 59999999999999999998
Q ss_pred ccccC------ceeeeccCCcc-chhhhhccCc----ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 244 LKTSG------LITSVIPKTPY-TLENILQFSP----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 244 ~~~~~------~l~LV~E~~~g-sL~~~l~~~~----~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+.... ..++++||+.+ +|.+++.... ...++...++.++.|++.||.|||++||+||||||+||+++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~ 149 (273)
T cd05074 70 SLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN 149 (273)
T ss_pred EccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC
Confidence 86532 24788899985 8888764211 1236777889999999999999999999999999999999988
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA- 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a- 391 (1566)
+ .+||+|||+++.......... .....+++.|++||.+....++...|+|+.|++ .+..++
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~i-------l~el~~~ 211 (273)
T cd05074 150 M--TVCVADFGLSKKIYSGDYYRQ---------GCASKLPVKWLALESLADNVYTTHSDVWAFGVT-------MWEIMTR 211 (273)
T ss_pred C--CEEECcccccccccCCcceec---------CCCccCchhhcCHhHHhcCccchhhhhHHHHHH-------HHHHhhC
Confidence 8 799999999985432110000 001124567999999988888899999999987 555555
Q ss_pred ccc
Q 000399 392 GRR 394 (1566)
Q Consensus 392 grs 394 (1566)
|+.
T Consensus 212 g~~ 214 (273)
T cd05074 212 GQT 214 (273)
T ss_pred CCC
Confidence 444
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-22 Score=242.37 Aligned_cols=197 Identities=22% Similarity=0.307 Sum_probs=157.3
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCc
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNI 237 (1566)
+...++|++.+.||+|+||.||+|.+. .++..||+|++.+..........+. +|+.++++++||||
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i 78 (345)
T cd07877 13 WEVPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHENV 78 (345)
T ss_pred hhccCceEEEEEeeecCCeEEEEEEEc------CCCeEEEEEEecCcchhhHHHHHHH--------HHHHHHHHcCCCcc
Confidence 344578999999999999999988753 4688999999875432222222333 59999999999999
Q ss_pred cccccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 238 APVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 238 V~l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
+++++++... ...|+++++++++|.++++. ..+++..++.++.|++.||.|||++||+||||||+||+++.
T Consensus 79 v~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 79 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 155 (345)
T ss_pred cceeeeeeecccccccccEEEEehhcccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC
Confidence 9999988543 35789999998899888863 34788889999999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhh
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKL 390 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ 390 (1566)
++ .+||+|||+++..... .....++..|+|||++.+ ..++...|+|+.|++ .+..+
T Consensus 156 ~~--~~kl~dfg~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~i-------l~el~ 212 (345)
T cd07877 156 DC--ELKILDFGLARHTDDE--------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI-------MAELL 212 (345)
T ss_pred CC--CEEEeccccccccccc--------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHH-------HHHHH
Confidence 98 7999999998753310 112247888999998765 467788999999987 66667
Q ss_pred cccc
Q 000399 391 AGRR 394 (1566)
Q Consensus 391 agrs 394 (1566)
+|+.
T Consensus 213 ~g~~ 216 (345)
T cd07877 213 TGRT 216 (345)
T ss_pred hCCC
Confidence 7764
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-22 Score=234.85 Aligned_cols=202 Identities=17% Similarity=0.164 Sum_probs=158.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|.++ .++..+|+|.+............+. +|+.+++.++||||++
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~~i~~ 70 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDK------DTGELVALKKVRLDNEKEGFPITAI--------REIKILRQLNHRNIVN 70 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEEC------CCCcEEEEEEEeecccccCchHHHH--------HHHHHHHhCCCCCeee
Confidence 3568999999999999999998863 4678899999875432222112222 5899999999999999
Q ss_pred ccccccccC----------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 240 VLGLLKTSG----------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 240 l~~~~~~~~----------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
+++++.+.. .+|+||||++++|.+.+... ...+++..++.++.||+.||.|||+.||+||||||+||++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 149 (302)
T cd07864 71 LKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL 149 (302)
T ss_pred eeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 999987654 79999999999888877643 3357888999999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHH
Q 000399 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLN 388 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln 388 (1566)
++++ .+||+|||+++........ +. ....++..|+|||.+.+ ..++...|+|+.|++ .+.
T Consensus 150 ~~~~--~~kl~dfg~~~~~~~~~~~-----~~-----~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~-------~~e 210 (302)
T cd07864 150 NNKG--QIKLADFGLARLYNSEESR-----PY-----TNKVITLWYRPPELLLGEERYGPAIDVWSCGCI-------LGE 210 (302)
T ss_pred CCCC--cEEeCcccccccccCCccc-----cc-----ccceeccCccChHHhcCCCCCCchhHHHHHHHH-------HHH
Confidence 9998 7999999999865421110 00 01125677999998754 346778999999987 667
Q ss_pred hhccccc
Q 000399 389 KLAGRRW 395 (1566)
Q Consensus 389 ~~agrs~ 395 (1566)
.+.|+.+
T Consensus 211 l~~g~~~ 217 (302)
T cd07864 211 LFTKKPI 217 (302)
T ss_pred HHhCCCC
Confidence 7778754
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-22 Score=229.09 Aligned_cols=192 Identities=16% Similarity=0.140 Sum_probs=146.7
Q ss_pred eeeeecchhhHHHHHhhhccCC-cchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGC-LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|.++..... ......+|+|.+.... .....++. +|+.+|+.++||||+++++++..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~~~h~~iv~~~~~~~~ 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFF--------EAASMMSQLSHKHLVLNYGVCVC 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHH--------HHHHHHHhCCCCChhheeeEEEe
Confidence 4699999999999886321000 1234568888876432 12222333 48889999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh------hhhh
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS------WLYI 319 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~------~vKL 319 (1566)
++..++||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.. .+|+
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 9999999999986 999999743 2346778888999999999999999999999999999999887621 2689
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
+|||++...... ....++..|+|||++.+ ..++...|+|+.|++ .+..+.|
T Consensus 150 ~d~g~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~-------l~~l~~g 201 (258)
T cd05078 150 SDPGISITVLPK---------------EILLERIPWVPPECIENPQNLSLAADKWSFGTT-------LWEIFSG 201 (258)
T ss_pred cccccccccCCc---------------hhccccCCccCchhccCCCCCCchhhHHHHHHH-------HHHHHcC
Confidence 999988643310 11236778999999876 457888999999987 5666666
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-22 Score=233.86 Aligned_cols=197 Identities=17% Similarity=0.199 Sum_probs=158.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|++|.||+|++. .++..+|+|.+...... .....+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 65 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNR------TTGEIVALKEIHLDAEE-GTPSTAI--------REISLMKELKHENIVRLHD 65 (284)
T ss_pred CceEeeeeccCCceEEEEEEEC------CCCeEEEEEEecccccc-cchHHHH--------HHHHHHHhhcCCCEeeeee
Confidence 5889999999999999998863 46889999998764321 1122223 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCc-ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~-~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+..++||||++++|.+++.... ...+++..++.++.|++.||.|||++|++||||||+||++++++ .+||+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~--~~~l~d 143 (284)
T cd07836 66 VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG--ELKLAD 143 (284)
T ss_pred eEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--cEEEee
Confidence 999999999999999999998886432 24578889999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
||+++....... ......++..|++||.+.+ ..++...|+|+.|++ .+..++|+.
T Consensus 144 ~g~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~ 199 (284)
T cd07836 144 FGLARAFGIPVN-----------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCI-------MAEMITGRP 199 (284)
T ss_pred cchhhhhcCCcc-----------ccccccccccccChHHhcCCCCCCcHHHHHHHHHH-------HHHHHhCCC
Confidence 999975432100 0011236778999998765 456778999999987 666777754
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.7e-22 Score=228.42 Aligned_cols=188 Identities=20% Similarity=0.147 Sum_probs=151.3
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|.+.. ....+..+|+|.+....... ....+. +|+.+++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~v~~~~~~~---~~~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~~~~~~i~~~~~~~~~~ 68 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKG---KDGKTTEVAVKTLKEDASEE-ERKDFL--------KEARVMKKLGHPNVVRLLGVCTEE 68 (262)
T ss_pred CccccCCceEEEEEEEec---CCCCCceEEeEeeccccchh-HHHHHH--------HHHHHHhhcCCCChheeeeeecCC
Confidence 469999999999988631 11237889999987643322 223333 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCc-------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 248 GLITSVIPKTPY-TLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~-------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
...++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~--~~~l 146 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL--VVKI 146 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC--cEEE
Confidence 999999999975 9999998531 35689999999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||.++......... ......++..|+|||.+....++...|+|+.|++
T Consensus 147 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 196 (262)
T cd00192 147 SDFGLSRDVYDDDYYR---------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVL 196 (262)
T ss_pred cccccccccccccccc---------cccCCCcCccccCHHHhccCCcchhhccHHHHHH
Confidence 9999998654311100 0112336778999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-22 Score=234.32 Aligned_cols=192 Identities=16% Similarity=0.132 Sum_probs=149.1
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc-cchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
.||+|+||.||+|++. .+++.||+|.+.+........ ..+.++ .+++..++...||||+++++++...
T Consensus 1 ~ig~g~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~ 69 (278)
T cd05606 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNE-----RIMLSLVSTGDCPFIVCMSYAFHTP 69 (278)
T ss_pred CcccCCCeEEEEEEEe------cCCCEEEEEEeeccccccchhHHHHHHH-----HHHHHHHHhCCCCcEeeeeeeeecC
Confidence 4899999999988752 468899999987653322111 111210 0123344556799999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
+..|+||||++| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+||+++.++ .+||+|||+++
T Consensus 70 ~~~~~v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~--~~kl~dfg~~~ 145 (278)
T cd05606 70 DKLSFILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLAC 145 (278)
T ss_pred CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC--CEEEccCcCcc
Confidence 999999999987 9988886 345688999999999999999999999999999999999999988 79999999987
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..... .. ....|+..|+|||++.+ ..++...|+|+.|++ .+..++|+.+
T Consensus 146 ~~~~~-------~~------~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~-------l~~l~~g~~p 195 (278)
T cd05606 146 DFSKK-------KP------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM-------LFKLLRGHSP 195 (278)
T ss_pred ccCcc-------CC------cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHH-------HHHHHhCCCC
Confidence 53311 00 12247889999999864 468889999999987 6677778754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.4e-22 Score=234.53 Aligned_cols=198 Identities=14% Similarity=0.144 Sum_probs=154.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
..++|++.+.||+|+||.||+|.+. .++..+|+|++...... ..++. +|+.+++.+ +||||+
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~~i~ 78 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNK------KNGSKAAVKILDPIHDI---DEEIE--------AEYNILKALSDHPNVV 78 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEEC------CCCceeEEEeeccccch---HHHHH--------HHHHHHHHHhcCCCee
Confidence 3568999999999999999998763 46788999987542211 11222 488888888 699999
Q ss_pred ccccccc-----ccCceeeeccCCcc-chhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 239 PVLGLLK-----TSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 239 ~l~~~~~-----~~~~l~LV~E~~~g-sL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
++++++. ..+..++||||+++ +|.+++.. .....+++..++.++.|++.||.|||+++|+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 158 (286)
T cd06638 79 KFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT 158 (286)
T ss_pred eeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC
Confidence 9999873 34579999999987 99988752 1234577888899999999999999999999999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-----cchhhccccccccccCCchhhh
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
.++ .+||+|||+++....... ......|++.|+|||++.. ..++.+.|+|+.|++
T Consensus 159 ~~~--~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi------- 218 (286)
T cd06638 159 TEG--GVKLVDFGVSAQLTSTRL-----------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGIT------- 218 (286)
T ss_pred CCC--CEEEccCCceeecccCCC-----------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHH-------
Confidence 998 699999999875432100 0112348889999998853 347778999999987
Q ss_pred HHHhhcccc
Q 000399 386 FLNKLAGRR 394 (1566)
Q Consensus 386 ~ln~~agrs 394 (1566)
.+..+.|+.
T Consensus 219 ~~el~~g~~ 227 (286)
T cd06638 219 AIELGDGDP 227 (286)
T ss_pred HHHHhcCCC
Confidence 566666754
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-22 Score=239.15 Aligned_cols=199 Identities=21% Similarity=0.290 Sum_probs=160.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|++. .++..+|+|.+..........+.+. +|+.+++.++||||+++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDK------RTGRKVAIKKISNVFDDLIDAKRIL--------REIKLLRHLRHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeC------CCCcEEEEEeeccccccchhhhhHH--------HHHHHHHhcCCcchhhhhh
Confidence 5889999999999999998853 4578899999876432222223333 5999999999999999999
Q ss_pred cccccC-----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 243 ~~~~~~-----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++...+ .+|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~--~~ 142 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELMETDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DL 142 (330)
T ss_pred hhcccCcccccceEEEecchhhhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 998775 8999999999999999873 33688999999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|+|||++......... . .......++..|+|||++.+. .++...|+|+.|++ .+..++|++
T Consensus 143 ~L~dfg~~~~~~~~~~~-----~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~i-------l~~l~~g~~ 205 (330)
T cd07834 143 KICDFGLARGVDPDEDE-----K---GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCI-------FAELLTRKP 205 (330)
T ss_pred EEcccCceEeecccccc-----c---ccccccccccCcCCceeeecccCCCcchhHHHHHHH-------HHHHHcCCC
Confidence 99999999865432110 0 001123478889999999877 78889999999987 666677754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.8e-22 Score=220.12 Aligned_cols=201 Identities=18% Similarity=0.268 Sum_probs=163.2
Q ss_pred ccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCC
Q 000399 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1403 (1566)
Q Consensus 1326 H~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg 1403 (1566)
..+.|.|+.. |+..++||+. |+||+|||..+-.|...+.||++.|.|+.|.. +.++|| |.+|++||+.+|
T Consensus 196 ~skgVYClQY--DD~kiVSGlr----DnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 196 NSKGVYCLQY--DDEKIVSGLR----DNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred cCCceEEEEe--cchhhhcccc----cCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCceEEEEeccCC
Confidence 4578888886 5567999998 99999999999999999999999999998744 577888 999999999999
Q ss_pred cEEEEeecccccccccC---------CCCCcccccccCCCC----CCCCcccccccccccccchhHHHhhhhhccceEEE
Q 000399 1404 KLLSVFAEQSMDSLHGG---------SPSSSISKINTDQVG----MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470 (1566)
Q Consensus 1404 ~~l~~l~~h~~~~~~~~---------~~~~~~~~~~~~~~~----~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~s 1470 (1566)
+++.++-.|...+.+.- +-+..+.+|+..... +-.+.+|-..|+.+.|+ .+++++
T Consensus 268 e~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd------------~kyIVs 335 (499)
T KOG0281|consen 268 EPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD------------DKYIVS 335 (499)
T ss_pred chhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc------------cceEEE
Confidence 99999988876644433 333344445433222 11245677778888886 459999
Q ss_pred EecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEe
Q 000399 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1566)
Q Consensus 1471 gs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l 1550 (1566)
+|.|.||++||+.++.+++++.+|.. -|-|+.+ .|+++++||+|.+|++||+..|++++.+
T Consensus 336 ASgDRTikvW~~st~efvRtl~gHkR------GIAClQY-------------r~rlvVSGSSDntIRlwdi~~G~cLRvL 396 (499)
T KOG0281|consen 336 ASGDRTIKVWSTSTCEFVRTLNGHKR------GIACLQY-------------RDRLVVSGSSDNTIRLWDIECGACLRVL 396 (499)
T ss_pred ecCCceEEEEeccceeeehhhhcccc------cceehhc-------------cCeEEEecCCCceEEEEeccccHHHHHH
Confidence 99999999999999999999998843 3344444 4579999999999999999999999999
Q ss_pred eccCceeeEeeeecc
Q 000399 1551 RAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1551 ~gH~~~V~~Vafspd 1565 (1566)
+||+.-|+++.|...
T Consensus 397 eGHEeLvRciRFd~k 411 (499)
T KOG0281|consen 397 EGHEELVRCIRFDNK 411 (499)
T ss_pred hchHHhhhheeecCc
Confidence 999999999999764
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.5e-21 Score=237.80 Aligned_cols=227 Identities=14% Similarity=0.225 Sum_probs=173.0
Q ss_pred cCCCceec--cCCCCCCCCCcccccccCccCCCCceEee--------------------------------e--------
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA--------------------------------S-------- 1318 (1566)
Q Consensus 1281 ~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~--------------------------------~-------- 1318 (1566)
.|.+.||+ ||+||++ ||+||.|+.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~DGKy-----LAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKY-----LASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred ccCCcEEEEEeCCCCce-----eeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 69999999 9999999 99999999999998755 0
Q ss_pred ---------------------eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccccccccccccccccc
Q 000399 1319 ---------------------ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1566)
Q Consensus 1319 ---------------------~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~ 1377 (1566)
.++.+.||.+.|.+++||.+ ++|+|+|. |+|||||++...+|+++|. |.+.|+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSM----DKTVRLWh~~~~~CL~~F~-HndfVT 413 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSM----DKTVRLWHPGRKECLKVFS-HNDFVT 413 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccc----cccEEeecCCCcceeeEEe-cCCeeE
Confidence 23478899999999999975 58899998 9999999999999999996 999999
Q ss_pred ceEEeecC-Cceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccccccc----------CCCCCCC-----C
Q 000399 1378 DICVLSSS-GRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT----------DQVGMLN-----S 1439 (1566)
Q Consensus 1378 sVafsp~g-~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~----------~~~~~~~-----~ 1439 (1566)
||+|+|-. ++++|| ||.||||++...+.+.=.+.+.-....+..+++...++.. .+..... .
T Consensus 414 cVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~ 493 (712)
T KOG0283|consen 414 CVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRL 493 (712)
T ss_pred EEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEee
Confidence 99999965 577898 9999999998777665444332222233344443333321 1111110 0
Q ss_pred c----ccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcc
Q 000399 1440 N----TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1566)
Q Consensus 1440 ~----~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~ 1515 (1566)
. .....|+.+.|.|. +...+++.+.|..|||+|.++-..++.|+|..+.- + -
T Consensus 494 ~~~Kk~~~~rITG~Q~~p~---------~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~---S------------Q 549 (712)
T KOG0283|consen 494 HNKKKKQGKRITGLQFFPG---------DPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTS---S------------Q 549 (712)
T ss_pred ccCccccCceeeeeEecCC---------CCCeEEEecCCCceEEEeccchhhhhhhcccccCC---c------------c
Confidence 0 01236888888876 23468888999999999999999999999874421 0 1
Q ss_pred cCCCcccchhHHHhccCCCceeEEeec
Q 000399 1516 QAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1516 ~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
....|+.||++|++|++|..|++|+..
T Consensus 550 ~~Asfs~Dgk~IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 550 ISASFSSDGKHIVSASEDSWVYIWKND 576 (712)
T ss_pred eeeeEccCCCEEEEeecCceEEEEeCC
Confidence 234577899999999999999999974
|
|
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-22 Score=234.18 Aligned_cols=202 Identities=15% Similarity=0.125 Sum_probs=158.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
+|++.+.||+|+||.||+|++. +...++..+|+|++....... ....+... +|+.+|+.+ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~---~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~~i~~~ 70 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKV---SGHDSGKLYAMKVLKKATIVQKAKTTEHTR-------TERQVLEHIRQSPFLVTL 70 (290)
T ss_pred CceeeeeeccCCcceEEEEEec---cCCCCCceEEEEEeehhhhhhcchHHHHHH-------HHHHHHHhcccCCChhce
Confidence 4888999999999999987752 223468889999987543211 11111222 588999999 59999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+..+..+|+||||+++ +|.+++.. ...+++..+..++.|++.||.|||++|++||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl 146 (290)
T cd05613 71 HYAFQTDTKLHLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVL 146 (290)
T ss_pred eeEeecCCeEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC--CEEE
Confidence 9999999999999999997 99999873 34578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc--chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM--DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~--~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++........ ......|+..|+|||.+... .++...|+|+.|++ .+..++|+.+
T Consensus 147 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~-------l~~ll~g~~p 207 (290)
T cd05613 147 TDFGLSKEFHEDEVE----------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVL-------MYELLTGASP 207 (290)
T ss_pred eeCccceeccccccc----------ccccccCCcccCChhhccCCCCCCCccccHHHHHHH-------HHHHhcCCCC
Confidence 999999854321000 01123478889999998653 46678999999987 6677778754
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.8e-22 Score=228.49 Aligned_cols=196 Identities=16% Similarity=0.170 Sum_probs=159.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc---ccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG---QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~---~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+|+..+.||+|+||+||+|.+. .++..+++|.+....... +..+++. +|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~ 66 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNL------DDGDFFAVKEVSLADDGQTGQEAVKQLE--------QEIALLSKLQHPNIVQ 66 (258)
T ss_pred CccccceeeecCCceEEEEEEc------CCCcEEEEEEEEEccccccchHHHHHHH--------HHHHHHHhcCCCCchh
Confidence 4778899999999999988752 468889999987643221 1222233 6999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++.....+|+||||+++ +|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+||+++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--~~k 142 (258)
T cd06632 67 YLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVK 142 (258)
T ss_pred eeeeEecCCeEEEEEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEE
Confidence 99999999999999999987 99999973 34477888889999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc-hhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++...... ......++..|++||.+.... ++..+|.|+.|++ .+..++|+.+
T Consensus 143 l~d~~~~~~~~~~~------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~-------l~~l~~g~~p 201 (258)
T cd06632 143 LADFGMAKQVVEFS------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCT-------VLEMATGKPP 201 (258)
T ss_pred EccCccceeccccc------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 99999988643211 011234788899999887666 8889999999987 6777777654
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-22 Score=235.16 Aligned_cols=196 Identities=15% Similarity=0.164 Sum_probs=160.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+||++.+. .++..+|+|++.... .....+.+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHI------PTGTVMAKKVVHIGA-KSSVRKQIL--------RELQIMHECRSPYIVSF 68 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEc------CCCcEEEEEEEEecC-cchHHHHHH--------HHHHHHHHcCCCCcceE
Confidence 357999999999999999988752 468889999886532 122223333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++...+.+|+||||+++ +|.+++.. .+.++...++.++.|++.||.|||+ .+++||||||+||+++.++ .++
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 144 (284)
T cd06620 69 YGAFLNENNICMCMEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--QIK 144 (284)
T ss_pred eeeEecCCEEEEEEecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC--cEE
Confidence 9999999999999999997 99888873 3457888899999999999999997 6999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++..... .. ....|+..|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 145 l~d~gl~~~~~~~------~~-------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~-------l~~l~tg~~p 201 (284)
T cd06620 145 LCDFGVSGELINS------IA-------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGIS-------IIELALGKFP 201 (284)
T ss_pred EccCCcccchhhh------cc-------CccccCcccCCHHHHccCCCCccchHHHHHHH-------HHHHHhCCCC
Confidence 9999998743210 00 11247888999999988888889999999987 6666777654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.7e-22 Score=230.17 Aligned_cols=199 Identities=17% Similarity=0.170 Sum_probs=160.9
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||.|+||.||++.+. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRK------SDGKILVWKEIDYGNMTEKEKQQLV--------SEVNILRELKHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeec------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHHhcCCCccceeee
Confidence 5889999999999999998863 5678899999876544333333344 5899999999999999999
Q ss_pred cccc--cCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHh-----hccccCCCccCCCcccccc
Q 000399 243 LLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLH-----SLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 243 ~~~~--~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH-----~~gIiHrDLKp~NILl~~~ 312 (1566)
++.. ...+|++|||+++ +|.+++... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.+
T Consensus 67 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~ 146 (265)
T cd08217 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN 146 (265)
T ss_pred eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence 8754 4568999999986 999998642 2345788889999999999999999 8999999999999999998
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcc
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
+ .+||+|||+++....... ......+++.|++||++.+..++...|.|+.|++ .+..+.|
T Consensus 147 ~--~~kl~d~g~~~~~~~~~~-----------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~i-------l~~l~~g 206 (265)
T cd08217 147 N--NVKLGDFGLAKILGHDSS-----------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCL-------IYELCAL 206 (265)
T ss_pred C--CEEEecccccccccCCcc-----------cccccccCCCccChhhhcCCCCCchhHHHHHHHH-------HHHHHHC
Confidence 8 799999999986442110 0112347888999999988888889999999987 6667778
Q ss_pred ccc
Q 000399 393 RRW 395 (1566)
Q Consensus 393 rs~ 395 (1566)
+.+
T Consensus 207 ~~p 209 (265)
T cd08217 207 SPP 209 (265)
T ss_pred CCc
Confidence 754
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.4e-22 Score=239.33 Aligned_cols=202 Identities=17% Similarity=0.194 Sum_probs=153.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~ 241 (1566)
+|++.+.||+|+||.||++++.. ...+..+|+|.+..........+.++ +|+.+++++ +||||++++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~ 68 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAE----TSEEETVAIKKITNVFSKKILAKRAL--------RELKLLRHFRGHKNITCLY 68 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCC----CCcCceEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCChheee
Confidence 48889999999999999988631 11277899999865322211122233 589999998 599999999
Q ss_pred ccccc----cCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 242 GLLKT----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 242 ~~~~~----~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
+.+.. ...+|++|||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~--~~ 144 (332)
T cd07857 69 DMDIVFPGNFNELYLYEELMEADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--EL 144 (332)
T ss_pred eeeeeccccCCcEEEEEecccCCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC--CE
Confidence 87543 246889999999999999863 44578999999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
||+|||+++......... ........|+..|+|||++.+ ..++..+|+|+.|++ .+..++|+.
T Consensus 145 kl~Dfg~a~~~~~~~~~~-------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~-------l~~l~~g~~ 208 (332)
T cd07857 145 KICDFGLARGFSENPGEN-------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCI-------LAELLGRKP 208 (332)
T ss_pred EeCcCCCceecccccccc-------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHH-------HHHHHhCCc
Confidence 999999998644211110 001123458889999998754 467889999999987 455556654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-22 Score=235.43 Aligned_cols=205 Identities=16% Similarity=0.127 Sum_probs=156.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+.- .....+..+++|.+... ........+. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~--~~~~~~~~v~~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 73 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILID--EKPGKEEEVFVKTVKDH-ASEIQVTLLL--------QESCLLYGLSHQNILPI 73 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEec--CCCCceeEEEEEEccCC-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 4579999999999999999988531 00113678899987643 2222223333 59999999999999999
Q ss_pred cccccc-cCceeeeccCCcc-chhhhhccCcc------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 241 LGLLKT-SGLITSVIPKTPY-TLENILQFSPN------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 241 ~~~~~~-~~~l~LV~E~~~g-sL~~~l~~~~~------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
++++.. ....++++||+++ +|.+++...+. ..+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~ 153 (280)
T cd05043 74 LHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE 153 (280)
T ss_pred EEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC
Confidence 998765 5678899999985 99999864322 347888899999999999999999999999999999999998
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA- 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a- 391 (1566)
+ .+||+|||+++......... ......++..|+|||.+.+..++...|+|+.|++ .+..++
T Consensus 154 ~--~~kl~d~g~~~~~~~~~~~~---------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~-------l~el~~~ 215 (280)
T cd05043 154 L--QVKITDNALSRDLFPMDYHC---------LGDNENRPVKWMALESLVNKEYSSASDVWSFGVL-------LWELMTL 215 (280)
T ss_pred C--cEEECCCCCcccccCCceEE---------eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHH-------HHHHhcC
Confidence 8 79999999998543211000 0111235667999999988888999999999987 555555
Q ss_pred ccc
Q 000399 392 GRR 394 (1566)
Q Consensus 392 grs 394 (1566)
|+.
T Consensus 216 g~~ 218 (280)
T cd05043 216 GQT 218 (280)
T ss_pred CCC
Confidence 554
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-22 Score=235.04 Aligned_cols=204 Identities=16% Similarity=0.197 Sum_probs=165.2
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccC------C
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH------P 235 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H------p 235 (1566)
.+|.+....|+|-|+.|..|.+. ..+..||||+|..+..... +-++|++||++|+. -
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~------~r~~~vAiKIIRnNE~M~K-----------tGl~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQ------ARGQEVAIKIIRNNEVMHK-----------TGLKELEILKKLNDADPEDKF 494 (752)
T ss_pred ceeEEEeccccceeeeeeecccc------CCCCeeEEEEeecchHHhh-----------hhhHHHHHHHHhhccCchhhh
Confidence 38999999999999999999974 4566999999998754432 23479999999952 4
Q ss_pred CcccccccccccCceeeeccCCccchhhhhcc-CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 236 NVAPVLGLLKTSGLITSVIPKTPYTLENILQF-SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 236 NIV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~-~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
++++|+-.|...+++|||+|-+.-+|.++|+. ..+-.+....++.|++|+..||..|-..||+|.||||.|||+++..+
T Consensus 495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence 89999999999999999999999999999984 33445788899999999999999999999999999999999999875
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||||||.|..... ...++.+ -+.+|.|||++.+..|+...|.|+.||- .|+....--+|.|++
T Consensus 575 -iLKLCDfGSA~~~~e-----neitPYL--------VSRFYRaPEIiLG~~yd~~iD~WSvgct-LYElYtGkIlFpG~T 639 (752)
T KOG0670|consen 575 -ILKLCDFGSASFASE-----NEITPYL--------VSRFYRAPEIILGLPYDYPIDTWSVGCT-LYELYTGKILFPGRT 639 (752)
T ss_pred -eeeeccCcccccccc-----ccccHHH--------HHHhccCcceeecCcccCCccceeecee-eEEeeccceecCCCC
Confidence 899999999986552 1222222 4567999999999999999999999985 333333333344444
Q ss_pred cCC
Q 000399 395 WGD 397 (1566)
Q Consensus 395 ~~d 397 (1566)
.|+
T Consensus 640 NN~ 642 (752)
T KOG0670|consen 640 NNQ 642 (752)
T ss_pred cHH
Confidence 443
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-22 Score=229.09 Aligned_cols=195 Identities=18% Similarity=0.151 Sum_probs=150.2
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|... .....+..+|+|.+...... ....++. +|+.+++.+.||||+++++++..
T Consensus 1 ~~ig~G~~g~v~~~~~~---~~~~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~- 67 (257)
T cd05060 1 KELGHGNFGSVVKGVYL---MKSGKEVEVAVKTLKQEHIA-AGKKEFL--------REASVMAQLDHPCIVRLIGVCKG- 67 (257)
T ss_pred CccCccCceeEEEeEee---ccCCCcceEEEEecccccch-HHHHHHH--------HHHHHHHhcCCCCeeeEEEEEcC-
Confidence 47999999999988742 11123478999998765432 2233344 59999999999999999998764
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
+..++||||+++ +|.+++... ..+++..+..++.|++.||.|||+++++||||||+|||++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~--~~kl~df~~~~ 143 (257)
T cd05060 68 EPLMLVMELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH--QAKISDFGMSR 143 (257)
T ss_pred CceEEEEEeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC--cEEeccccccc
Confidence 468999999986 999999743 3578889999999999999999999999999999999999998 79999999998
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
......... .......++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 144 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~~~~~~g~~ 197 (257)
T cd05060 144 ALGAGSDYY--------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVT-------LWEAFSYGAK 197 (257)
T ss_pred eeecCCccc--------ccccCccccccccCHHHhcCCCCCccchHHHHHHH-------HHHHHcCCCC
Confidence 643211100 00011123457999999988889999999999987 566664 544
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-22 Score=228.93 Aligned_cols=195 Identities=15% Similarity=0.186 Sum_probs=161.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|... .++..+++|.+..... ..++. +|+.+++.++||||++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~----~~~~~--------~e~~~~~~l~~~~i~~~~ 64 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHK------ETGQVVAIKVVPVEED----LQEII--------KEISILKQCDSPYIVKYY 64 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEc------CCCcEEEEEEeecHHH----HHHHH--------HHHHHHHhCCCCcEeeee
Confidence 57999999999999999988753 3578899999865422 23333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+...+|+++||+++ +|.+++... ...+++..++.++.|++.||.|||+.+|+||||+|+||+++.++ .+||+
T Consensus 65 ~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~--~~~l~ 141 (256)
T cd06612 65 GSYFKNTDLWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKLA 141 (256)
T ss_pred eeeecCCcEEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC--cEEEc
Confidence 999999999999999997 999998632 34578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++........ . .....++..|+|||++.+..++.+.|+|+.|+| .+..+.|+.+
T Consensus 142 dfg~~~~~~~~~~-----~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~i-------l~~l~~g~~p 198 (256)
T cd06612 142 DFGVSGQLTDTMA-----K------RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGIT-------AIEMAEGKPP 198 (256)
T ss_pred ccccchhcccCcc-----c------cccccCCccccCHHHHhcCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999986442100 0 112236788999999988888889999999988 6666777654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-22 Score=236.91 Aligned_cols=195 Identities=16% Similarity=0.183 Sum_probs=158.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|.....||+|+||.||++.+. .++..+|||.+.... ......+. +|+.+++.++||||++++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~ii~~~ 85 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEK------HTGKQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYHHENVVDMY 85 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEEC------CCCCEEEEEEEecch--HHHHHHHH--------HHHHHHHhCCCCcHHHHH
Confidence 45666788999999999988752 467889999876432 12222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+...+..|+||||+++ +|.+++.. +.+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kL~ 160 (292)
T cd06658 86 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG--RIKLS 160 (292)
T ss_pred HheecCCeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEc
Confidence 999999999999999987 89888852 3478888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++....... .. .....++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 161 dfg~~~~~~~~~----~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvi-------l~el~~g~~p 217 (292)
T cd06658 161 DFGFCAQVSKEV----PK-------RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIM-------VIEMIDGEPP 217 (292)
T ss_pred cCcchhhccccc----cc-------CceeecCccccCHHHHccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999987543210 00 012247888999999988888899999999987 6677778754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-22 Score=239.44 Aligned_cols=204 Identities=22% Similarity=0.339 Sum_probs=159.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
+.++|++.+.||+|+||.||+|.+. .++..+|+|.+.+..........+ .+|+.+++++ +||||+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~--------~~E~~~l~~l~~h~ni~ 70 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDR------RTKEVVALKKIFDAFRNATDAQRT--------FREIMFLQELGDHPNIV 70 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEc------CCCeEEEEEeeccccCcchhhhhh--------hHHHHHHHHhcCCCCcc
Confidence 4678999999999999999998753 467889999886532222222222 2699999999 999999
Q ss_pred ccccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 239 PVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 239 ~l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++++... ..+|+||||++++|.+++... .+.+..++.++.||+.||.|||++||+||||||+||+++.++ .
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~--~ 145 (337)
T cd07852 71 KLLNVIKAENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC--R 145 (337)
T ss_pred ceeeeeccCCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 999998654 368999999999999988732 567778888999999999999999999999999999999999 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+++......... ... ......|+..|+|||++.+ ..++...|+|+.|++ .+..++|+..
T Consensus 146 ~kl~d~g~~~~~~~~~~~~--~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~-------l~el~tg~~p 212 (337)
T cd07852 146 VKLADFGLARSLSELEENP--ENP----VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCI-------LGEMLLGKPL 212 (337)
T ss_pred EEEeeccchhccccccccc--cCc----chhcccccccccCceeeeccccccccchHHHHHHH-------HHHHHhCCCC
Confidence 9999999998654211110 000 1122357889999998754 456788999999987 6777777653
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-22 Score=228.94 Aligned_cols=202 Identities=18% Similarity=0.178 Sum_probs=152.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|+++........+..+|+|.+.+.. ......++. +|+.+|+.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 71 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFL--------KEAHLMSNFNHPNIVKLLGVCLLN 71 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHH--------HHHHHHHhcCCCCeeeEeeeecCC
Confidence 46899999999998864211112345789999886542 122233444 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCc-----ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc---hhhhh
Q 000399 248 GLITSVIPKTPY-TLENILQFSP-----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC---WSWLY 318 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~-----~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~---~~~vK 318 (1566)
+..++||||+++ +|.+++.... ...++...+..++.|++.||.|||+++++||||||+||+++.++ ...+|
T Consensus 72 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~ 151 (269)
T cd05044 72 EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVK 151 (269)
T ss_pred CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceE
Confidence 999999999986 9999986421 22367788889999999999999999999999999999998765 12589
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|+|||+++.......... .....++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 152 l~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~ellt~g~~ 212 (269)
T cd05044 152 IGDFGLARDIYKSDYYRK---------EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVL-------MWEILTLGQQ 212 (269)
T ss_pred ECCccccccccccccccc---------CcccCCCccccCHHHHccCCcccchhHHHHHHH-------HHHHHHcCCC
Confidence 999999985432111000 011124567999999988889999999999987 555554 543
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.5e-22 Score=228.21 Aligned_cols=186 Identities=18% Similarity=0.194 Sum_probs=150.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||++.+ .++..+|+|.+...... ..++. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~-------~~~~~~~~k~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYW-------LEKRKVAIKTIREGAMS---EEDFI--------EEAQVMMKLSHPKLVQLY 65 (256)
T ss_pred hHeEEEeeecCcccceEEEEEE-------eCCCeEEEEECCCCCCC---HHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 4789999999999999998764 23567899987654322 12344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++......++||||+++ +|.+++... .+.+++..++.++.|++.|+.|||+++++||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~--~~~l~ 142 (256)
T cd05112 66 GVCTERSPICLVFEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ--VVKVS 142 (256)
T ss_pred EEEccCCceEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC--eEEEC
Confidence 999999999999999987 999998742 33567888899999999999999999999999999999999888 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++...... .. ...+..++..|+|||.+.+..++..+|+|+.|++
T Consensus 143 d~g~~~~~~~~~-----~~-----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~ 190 (256)
T cd05112 143 DFGMTRFVLDDQ-----YT-----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVL 190 (256)
T ss_pred CCcceeecccCc-----cc-----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHH
Confidence 999987543110 00 0111224567999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.9e-22 Score=229.68 Aligned_cols=187 Identities=14% Similarity=0.095 Sum_probs=138.7
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||++... .......+++|.+.... .......++ +|+.+++.++||||+++++.+.+.
T Consensus 1 ~~lg~G~~g~v~~~~~~----~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~~~~~~~~ 67 (268)
T cd05086 1 QEIGNGWFGKVLLSEIY----TDTGVARVVVKELKANA-SSKEQNEFL--------QQGDPYRILQHPNILQCLGQCVEA 67 (268)
T ss_pred CcCCCCcCceEEEEEEE----cCCCcceEEEEEecCCC-ChHHHHHHH--------HHHHHHhccCCcchhheEEEecCC
Confidence 36999999999987631 01223445566654432 122233444 588899999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCc--ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~--~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
...|+||||+++ +|.++++... ....+...++.++.||+.||.|||+++|+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~--~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL--TVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc--cEEeccccc
Confidence 999999999996 9999997432 12345566788999999999999999999999999999999988 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccc-------cchhhcccccccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-------MDWHSQFNRWWRGEL 378 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-------~~y~~~~d~Ws~G~i 378 (1566)
++......... ......++..|+|||++.. ..++...|+|+.|++
T Consensus 146 ~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~ 197 (268)
T cd05086 146 GPSRYKEDYIE---------TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVT 197 (268)
T ss_pred ccccCcchhhh---------cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHH
Confidence 86422110000 0112346788999998753 234668999999987
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-22 Score=230.55 Aligned_cols=195 Identities=16% Similarity=0.120 Sum_probs=153.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|+.+.. ........+++|.+..... .....++. +|++++++++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 74 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGI-EEEGGETLVLVKALQKTKD-ENLQSEFR--------RELDMFRKLSHKNVVRLL 74 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccC-CcCCCcceEEEEccCCccc-hHHHHHHH--------HHHHHHHhcCCcceeeeE
Confidence 5799999999999999999885321 1123456788988754321 11122333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcc-------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPN-------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++.+.+..|+||||+++ +|.+++..... ..++...+..++.|++.||.|||+++|+||||||+||+++.++
T Consensus 75 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~ 154 (275)
T cd05046 75 GLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQR 154 (275)
T ss_pred EEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCC
Confidence 999999999999999995 99999974331 1578889999999999999999999999999999999999988
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.++|+|||+++........ . .....++..|++||.+.+..+....|+|+.|++
T Consensus 155 --~~~l~~~~~~~~~~~~~~~----~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 207 (275)
T cd05046 155 --EVKVSLLSLSKDVYNSEYY----K------LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVL 207 (275)
T ss_pred --cEEEcccccccccCccccc----c------cCCceeEEeecChhhhccCCCCchhhHHHHHHH
Confidence 7999999998743311000 0 011235667999999888788889999999987
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-22 Score=236.95 Aligned_cols=190 Identities=17% Similarity=0.190 Sum_probs=146.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchh----hccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDC----VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~----~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
.++|+..+.||+|+||.||+|.+. .++ ..+|+|.+..... .....++. +|+.+++.++|||
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~------~~~~~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~~~~l~h~n 70 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWV------PEGETVKIPVAIKILNETTG-PKANVEFM--------DEALIMASMDHPH 70 (303)
T ss_pred hhhceeccccccCCCccEEEEEEe------cCCCcceeeEEEEeccccCC-HHHHHHHH--------HHHHHHHhCCCCC
Confidence 357899999999999999998752 223 3468887754321 12122333 5889999999999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
|+++++++... ..++|+||+++ +|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 71 iv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~-- 146 (303)
T cd05110 71 LVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN-- 146 (303)
T ss_pred cccEEEEEcCC-CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC--
Confidence 99999998754 46789999995 999998742 23467888899999999999999999999999999999999888
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.+||+|||+++......... ......++..|+|||.+.+..++...|+|+.|++
T Consensus 147 ~~kL~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~ 200 (303)
T cd05110 147 HVKITDFGLARLLEGDEKEY---------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVT 200 (303)
T ss_pred ceEEccccccccccCccccc---------ccCCCccccccCCHHHhccCCCChHHHHHHHHHH
Confidence 69999999998644211100 0111235667999999988888999999999977
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-22 Score=237.04 Aligned_cols=195 Identities=20% Similarity=0.352 Sum_probs=156.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+.++|++++.||+|+||.||+|.+. .++..+|+|.+.+........+.+. +|+.+++.++||||++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~ 73 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQ------LTGQNVAIKKIMKPFSTPVLAKRTY--------RELKLLKHLRHENIIS 73 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEEC------CCCCEEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCeee
Confidence 4668999999999999999998863 5788999998865432222222333 5999999999999999
Q ss_pred ccccccc-cCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKT-SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~-~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++|.. ....|+||||++++|.++++ ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 74 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~--~~~ 148 (328)
T cd07856 74 LSDIFISPLEDIYFVTELLGTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DLK 148 (328)
T ss_pred EeeeEecCCCcEEEEeehhccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC--CEE
Confidence 9999865 56889999999889998886 23467778889999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+|||+++..... .....++..|+|||.+.+ ..++...|+|+.|++ .+..+.|+.
T Consensus 149 l~dfg~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i-------l~el~tg~~ 204 (328)
T cd07856 149 ICDFGLARIQDPQ--------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCI-------FAEMLEGKP 204 (328)
T ss_pred eCccccccccCCC--------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHH-------HHHHHhCCC
Confidence 9999998743210 012236778999998765 567889999999987 555666654
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.8e-22 Score=230.48 Aligned_cols=193 Identities=21% Similarity=0.188 Sum_probs=153.0
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 242 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~~ 242 (1566)
|++++.||+|+||.||+|.+. .++..+|+|.+.+...... ....+ +|+.++.++. ||||+++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~-~~~~~--------~e~~~l~~l~~h~~i~~~~~ 65 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSR------KTGKYYAIKCMKKHFKSLE-QVNNL--------REIQALRRLSPHPNILRLIE 65 (282)
T ss_pred CceEeeccccccceEEEEEEc------CCCcEEEEEEehhccCCch-hhhHH--------HHHHHHhhcCCCCCccceEE
Confidence 678899999999999998863 4678899999875422221 11222 4888888885 999999999
Q ss_pred ccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++.+. +.+++||||++++|.+.+... ...+++..++.++.|++.||.|||++||+||||||+||+++. + .+||+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~--~~kl~ 141 (282)
T cd07831 66 VLFDRKTGRLALVFELMDMNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D--ILKLA 141 (282)
T ss_pred EEecCCCCcEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C--CeEEE
Confidence 99887 899999999999888888742 245788899999999999999999999999999999999999 6 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++....... .....++..|+|||.+. +..++..+|+|+.|++ .+..++|..
T Consensus 142 dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~-------l~el~~~~~ 197 (282)
T cd07831 142 DFGSCRGIYSKPP------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCV-------FFEILSLFP 197 (282)
T ss_pred ecccccccccCCC------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHH-------HHHHHcCCc
Confidence 9999986432100 01124678899999764 3456778999999987 666666654
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.1e-22 Score=227.94 Aligned_cols=196 Identities=18% Similarity=0.185 Sum_probs=147.1
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccc-c
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK-T 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~-~ 246 (1566)
+.||+|+||.||+|.+. ........+|+|.+.... .......+. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~g~~g~v~~~~~~---~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~~ 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLI---DSDGQKIHCAVKSLNRIT-DLEEVEQFL--------KEGIIMKDFSHPNVLSLLGICLPS 68 (262)
T ss_pred CcccccCCceEEEEEEe---cCCCceEEEEEEecCccC-CHHHHHHHH--------HHHHHHccCCCCCcceEEEEeecC
Confidence 46899999999988742 112345679999875421 112223333 5888999999999999999765 4
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
++..++||||+.+ +|.+++.... ...+...+..++.|++.||.|||+++|+||||||+|||+++++ .+||+|||++
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~--~~kl~dfg~~ 145 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF--TVKVADFGLA 145 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEECCcccc
Confidence 5578999999986 9999997432 2345667788999999999999999999999999999999988 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
+......... .. ......++..|+|||.+.+..++...|+|+.|++ .+..++|
T Consensus 146 ~~~~~~~~~~----~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~el~~~ 198 (262)
T cd05058 146 RDIYDKEYYS----VH---NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL-------LWELMTR 198 (262)
T ss_pred ccccCCccee----ec---ccccCcCCccccChhHhccCccchHHHHHHHHHH-------HHHHHcC
Confidence 8543210000 00 0112335678999999988888999999999987 6666664
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.3e-22 Score=235.71 Aligned_cols=194 Identities=16% Similarity=0.148 Sum_probs=157.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
-|+....||+|+||.||+|.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~hp~i~~~~~ 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREK------HSGRQVAVKMMDLRKQ--QRRELLF--------NEVVIMRDYQHQNVVEMYK 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEc------CCCCEEEEEEEEeccc--chHHHHH--------HHHHHHHhCCCCchhhhhh
Confidence 4556668999999999988753 4678899999865322 1222233 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+..++..|+||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~~~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~--~~kL~d 160 (297)
T cd06659 86 SYLVGEELWVLMEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG--RVKLSD 160 (297)
T ss_pred heeeCCeEEEEEecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC--cEEEee
Confidence 99999999999999997 8888775 23478888999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++...... . ......++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 161 fg~~~~~~~~~-----~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~el~~g~~p 216 (297)
T cd06659 161 FGFCAQISKDV-----P------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIM-------VIEMVDGEPP 216 (297)
T ss_pred chhHhhccccc-----c------cccceecCccccCHHHHccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99987433110 0 0112347889999999988888999999999987 6667777653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.5e-22 Score=232.74 Aligned_cols=196 Identities=13% Similarity=0.101 Sum_probs=160.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||++.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~hp~i~~~ 81 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDV------ATGQEVAIKQMNLQQQ--PKKELII--------NEILVMRENKHPNIVNY 81 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEc------CCCCEEEEEEeccccc--hHHHHHH--------HHHHHHhhcCCCCeeeh
Confidence 468999999999999999988752 4577899999754321 1122333 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+..|+|+||+++ +|.+++.. ..++...+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~--~~kL 156 (293)
T cd06647 82 LDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 156 (293)
T ss_pred hheeeeCCcEEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC--CEEE
Confidence 9999999999999999987 99999873 3467788899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........ ......+++.|++||.+....++..+|+|+.|++ .+..+.|+.+
T Consensus 157 ~dfg~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~l-------l~~ll~g~~p 214 (293)
T cd06647 157 TDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM-------AIEMVEGEPP 214 (293)
T ss_pred ccCcceeccccccc-----------ccccccCChhhcCchhhccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99999875432110 1122347888999999988888889999999987 6677778764
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.7e-21 Score=205.48 Aligned_cols=204 Identities=20% Similarity=0.281 Sum_probs=170.7
Q ss_pred cccccCccCCCCceEe--eeeehhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEeccccccccccccccccc
Q 000399 1301 LGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1566)
Q Consensus 1301 LaSgS~D~~I~vWdl~--~~~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~ 1377 (1566)
+++++.||++++||.. .+.++.++.|...|.++.|++ +...++++|. |+|||+|+..-.+.++++.||.+-|+
T Consensus 76 ~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSW----D~TiKLW~~~r~~Sv~Tf~gh~~~Iy 151 (311)
T KOG0277|consen 76 VIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSW----DGTIKLWDPNRPNSVQTFNGHNSCIY 151 (311)
T ss_pred EEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeecc----CCceEeecCCCCcceEeecCCccEEE
Confidence 8889999999999965 348999999999999999998 6677888888 99999999999999999999999999
Q ss_pred ceEEeecCCce-e--eccCcEEEeecCC-CcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccc
Q 000399 1378 DICVLSSSGRI-A--SCDGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDG 1453 (1566)
Q Consensus 1378 sVafsp~g~~L-a--SgDgtIkLWDl~t-g~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp 1453 (1566)
..+|+|...-+ + |+|+++++||++. |+.+. +..| ...|+++.|+.
T Consensus 152 ~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah------------------------------~~Eil~cdw~k 200 (311)
T KOG0277|consen 152 QAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAH------------------------------NSEILCCDWSK 200 (311)
T ss_pred EEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEec------------------------------cceeEeecccc
Confidence 99999987654 4 5599999999985 44443 5443 45677888876
Q ss_pred hhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccC
Q 000399 1454 NLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1566)
Q Consensus 1454 ~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~ 1532 (1566)
- +.+.++||+.|+.||.||+++- +++.++.+| .-.|+.|+++|... ..|||+|.
T Consensus 201 y---------~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh------~~AVRkvk~Sph~~----------~lLaSasY 255 (311)
T KOG0277|consen 201 Y---------NHNVLATGGVDNLVRGWDIRNLRTPLFELNGH------GLAVRKVKFSPHHA----------SLLASASY 255 (311)
T ss_pred c---------CCcEEEecCCCceEEEEehhhccccceeecCC------ceEEEEEecCcchh----------hHhhhccc
Confidence 5 4679999999999999999975 567777665 55678888887653 58999999
Q ss_pred CCceeEEeeccC-ceeEEeeccCceeeEeeeec
Q 000399 1533 SGQCRLFDVRSG-NVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1533 Dg~I~lWD~~sg-k~l~~l~gH~~~V~~Vafsp 1564 (1566)
|-++||||...+ ..+.+..-|+..|..+.||+
T Consensus 256 DmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~ 288 (311)
T KOG0277|consen 256 DMTVRIWDPERQDSAIETVDHHTEFVCGLDWSL 288 (311)
T ss_pred cceEEecccccchhhhhhhhccceEEecccccc
Confidence 999999998854 46777888999999999986
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=7e-22 Score=237.80 Aligned_cols=196 Identities=21% Similarity=0.315 Sum_probs=155.4
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
....+|.+.+.||+|+||.||+|++. .++..+|+|.+.+..........+. +|+.+++.++||||+
T Consensus 12 ~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~niv 77 (342)
T cd07879 12 ELPERYTSLKQVGSGAYGSVCSAIDK------RTGEKVAIKKLSRPFQSEIFAKRAY--------RELTLLKHMQHENVI 77 (342)
T ss_pred ccccceEEEEEeeecCCeEEEEEEeC------CCCcEEEEEEecCccccccchhHHH--------HHHHHHHhcCCCCcc
Confidence 34568999999999999999998752 4688999999875422222112222 699999999999999
Q ss_pred cccccccccC------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 239 PVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 239 ~l~~~~~~~~------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
++++++.... .+|+||||+..+|..++. ..+++..++.++.|++.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~ 153 (342)
T cd07879 78 GLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED 153 (342)
T ss_pred chhheecccccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 9999987543 469999999888777653 246888899999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhc
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+ .+||+|||+++..... .....++..|+|||++.+ ..++...|+|+.|++ .+..+.
T Consensus 154 ~--~~kL~dfg~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvi-------l~el~~ 210 (342)
T cd07879 154 C--ELKILDFGLARHADAE--------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCI-------MAEMLT 210 (342)
T ss_pred C--CEEEeeCCCCcCCCCC--------------CCCceeeecccChhhhcCccccCchHHHHHHHHH-------HHHHHh
Confidence 8 7999999998853310 012236788999998865 457889999999987 666777
Q ss_pred cccc
Q 000399 392 GRRW 395 (1566)
Q Consensus 392 grs~ 395 (1566)
|+.+
T Consensus 211 g~~p 214 (342)
T cd07879 211 GKTL 214 (342)
T ss_pred CCCC
Confidence 7653
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4e-21 Score=205.70 Aligned_cols=236 Identities=19% Similarity=0.270 Sum_probs=194.6
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~t 1354 (1566)
++..|.+.||+ +..+..+ .|+++.|-+.++||.-++ .+.++. |..-|.+++|+.|..+|+||+. ++.
T Consensus 54 tfeghkgavw~~~l~~na~~-----aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~----ekl 123 (334)
T KOG0278|consen 54 TFEGHKGAVWSATLNKNATR-----AASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQ----EKL 123 (334)
T ss_pred eeeccCcceeeeecCchhhh-----hhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccch----HHH
Confidence 35669999998 6777777 899999999999997766 777776 9999999999999999999998 999
Q ss_pred eeeEEeccc-ccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccc---------ccccCCC
Q 000399 1355 VQKWELTRI-NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD---------SLHGGSP 1422 (1566)
Q Consensus 1355 VrlWDl~tg-~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~---------~~~~~~~ 1422 (1566)
+||+|++.- .+...+.||++.|..+-|....+.++|. |++||+||.+||..++++...+.. -+.+...
T Consensus 124 lrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~ 203 (334)
T KOG0278|consen 124 LRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAY 203 (334)
T ss_pred hhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEec
Confidence 999999765 3557789999999999999999988774 999999999999999887643322 2233334
Q ss_pred CCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee-ccCCcccCch
Q 000399 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW-RGEPTELGFP 1501 (1566)
Q Consensus 1423 ~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~-~~h~~~v~~~ 1501 (1566)
...+..|+......+........|.+.+.+|+ ...+++|+.|..++.+|..+|..+-.+ ++| .
T Consensus 204 gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~----------k~~fVaGged~~~~kfDy~TgeEi~~~nkgh------~ 267 (334)
T KOG0278|consen 204 GSSVKFWDAKSFGLLKSYKMPCNVESASLHPK----------KEFFVAGGEDFKVYKFDYNTGEEIGSYNKGH------F 267 (334)
T ss_pred CceeEEeccccccceeeccCccccccccccCC----------CceEEecCcceEEEEEeccCCceeeecccCC------C
Confidence 45566777777777777777778888888887 679999999999999999999998876 544 5
Q ss_pred hhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEe
Q 000399 1502 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1566)
Q Consensus 1502 ~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l 1550 (1566)
++|-||.|+ |||...|+||.||+|++|-+..++....|
T Consensus 268 gpVhcVrFS-----------PdGE~yAsGSEDGTirlWQt~~~~~~~~~ 305 (334)
T KOG0278|consen 268 GPVHCVRFS-----------PDGELYASGSEDGTIRLWQTTPGKTYGLW 305 (334)
T ss_pred CceEEEEEC-----------CCCceeeccCCCceEEEEEecCCCchhhc
Confidence 667777665 66788999999999999999887765433
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-22 Score=231.29 Aligned_cols=196 Identities=16% Similarity=0.162 Sum_probs=160.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
..|+.++.||.|+||.||+|.+. .++..+|+|.+..... ......+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDN------RTQQVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEc------cCCEEEEEEEEecccc-HHHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46889999999999999998753 4678899999875422 22223344 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.++...|+||||+++ +|.+++.. ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~--~~~l~ 143 (277)
T cd06640 69 GSYLKGTKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC--CEEEc
Confidence 999999999999999987 99998873 3478888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++........ ......++..|+|||++.+..++...|.|+.|++ .+..+.|..+
T Consensus 144 dfg~~~~~~~~~~-----------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~i-------l~el~tg~~p 200 (277)
T cd06640 144 DFGVAGQLTDTQI-----------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGIT-------AIELAKGEPP 200 (277)
T ss_pred ccccceeccCCcc-----------ccccccCcccccCHhHhccCCCccHHHHHHHHHH-------HHHHHHCCCC
Confidence 9999975432100 0112247788999999988888889999999988 5666777654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-20 Score=235.07 Aligned_cols=228 Identities=10% Similarity=0.140 Sum_probs=169.8
Q ss_pred ccccCCCceec--cCCC-CCCCCCcccccccCccCCCCceEeee---------eehhhhhccCcceeeeecCcceE-EEe
Q 000399 1278 NLMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKAS---------ILSSIRAHHGALRSVAVGQDECT-VFT 1344 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpd-g~~~~~~~LaSgS~D~~I~vWdl~~~---------~l~tl~gH~~~V~slafspd~~~-LaS 1344 (1566)
....|.+.|++ |+|+ +.+ |+|||.|++|++||+.++ .+..+.+|.+.|.+++|+|++.. ++|
T Consensus 69 ~L~gH~~~V~~lafsP~~~~l-----LASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaS 143 (568)
T PTZ00420 69 KLKGHTSSILDLQFNPCFSEI-----LASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCS 143 (568)
T ss_pred EEcCCCCCEEEEEEcCCCCCE-----EEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEE
Confidence 34569999988 8986 666 999999999999998743 23457899999999999998865 578
Q ss_pred eccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCC
Q 000399 1345 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1566)
Q Consensus 1345 gS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~ 1422 (1566)
||. |++|+|||+.+++.+..+. |...|.+++|+++|..++++ |++|+|||+++++.+.++.+|.....
T Consensus 144 gS~----DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~----- 213 (568)
T PTZ00420 144 SGF----DSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKN----- 213 (568)
T ss_pred EeC----CCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCce-----
Confidence 887 9999999999998777775 66789999999999998754 99999999999999988877643100
Q ss_pred CCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCc----eEEEEEccC-CceeeeeccCCcc
Q 000399 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG----SLRFIDINQ-GQKLHLWRGEPTE 1497 (1566)
Q Consensus 1423 ~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~Dg----tIrlWDi~t-g~~l~~~~~h~~~ 1497 (1566)
...+....|++ ++.++++++.|+ +|+|||+++ ++++..+..+..
T Consensus 214 --------------------s~~v~~~~fs~----------d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~- 262 (568)
T PTZ00420 214 --------------------TKNIWIDGLGG----------DDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA- 262 (568)
T ss_pred --------------------eEEEEeeeEcC----------CCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC-
Confidence 00111223334 477888888774 799999995 566666543321
Q ss_pred cCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCce--eEEeeccCceeeEeeeeccC
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV--IASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1498 v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~--l~~l~gH~~~V~~VafspdG 1566 (1566)
.+ .+.. ....++|.++++|+.|+.|++|++.++.. +..+. +..++.+++|.|++
T Consensus 263 ---~~---~L~p--------~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~-s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 263 ---SA---PLIP--------HYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYK-SCSPFRSFGFLPKQ 318 (568)
T ss_pred ---cc---ceEE--------eeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccc-cCCCccceEEcccc
Confidence 11 1100 01124577899999999999999988753 23334 67789999999974
|
|
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.5e-22 Score=225.38 Aligned_cols=192 Identities=20% Similarity=0.161 Sum_probs=152.5
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
+++.+.||+|+||.||+|.+.... ...+..+|+|.+..... ......+. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 69 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLS--GEKEVEVAVKTLKEDAD-EQQIEEFL--------REARIMRKLDHPNIVKLLGV 69 (258)
T ss_pred CcccceeccCCCcceEEEEecCCC--CCCCceEEEEEccCCCC-hHHHHHHH--------HHHHHHHhcCCCchheEEEE
Confidence 457789999999999998863210 12358899999865422 11223333 58999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+.+.+..|++|||+++ +|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .++|+||
T Consensus 70 ~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~--~~~l~df 147 (258)
T smart00219 70 CTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL--VVKISDF 147 (258)
T ss_pred EcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC--eEEEccc
Confidence 9999999999999987 999999743332278889999999999999999999999999999999999998 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+++.......... ..-.++..|+|||.+.+..++...|+|+.|++
T Consensus 148 g~~~~~~~~~~~~~----------~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i 193 (258)
T smart00219 148 GLSRDLYDDDYYKK----------KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVL 193 (258)
T ss_pred CCceeccccccccc----------ccCCCcccccChHHhccCCCCcchhHHHHHHH
Confidence 99986543211100 01125678999999988888899999999987
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-21 Score=227.55 Aligned_cols=218 Identities=20% Similarity=0.293 Sum_probs=182.2
Q ss_pred CCCCCCCCCcccccccCccCCCCceEee--e-----eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecc
Q 000399 1290 TPAASWDGPDFLGRVGGLKDESPWKIKA--S-----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1362 (1566)
Q Consensus 1290 Spdg~~~~~~~LaSgS~D~~I~vWdl~~--~-----~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~t 1362 (1566)
.|++++ |.|||.|+.|++|++.. + .+.++..|...|++++...+++.|+|+|. |-||++|+...
T Consensus 34 a~~~ry-----LfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~Ss----DtTVK~W~~~~ 104 (735)
T KOG0308|consen 34 APNGRY-----LFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASS----DTTVKVWNAHK 104 (735)
T ss_pred CCCCce-----EEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecC----CceEEEeeccc
Confidence 345666 99999999999999864 2 47889999999999999999999999998 99999999987
Q ss_pred c--ccccccccccccccceEE-eecCCceeec--cCcEEEeecCCCc--EEEEeecccccccccCCCCCcccccccCCCC
Q 000399 1363 I--NCVSGYYGHEEVVNDICV-LSSSGRIASC--DGTLHVWNSQTGK--LLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1435 (1566)
Q Consensus 1363 g--~~i~tl~gH~~~V~sVaf-sp~g~~LaSg--DgtIkLWDl~tg~--~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 1435 (1566)
+ -|..++..|.+.|.|+++ .++...+||| |+.|.|||+.+|. .+..+..-..
T Consensus 105 ~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~--------------------- 163 (735)
T KOG0308|consen 105 DNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTV--------------------- 163 (735)
T ss_pred CcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccccc---------------------
Confidence 7 689999999999999998 6666677888 9999999999883 4443332110
Q ss_pred CCCCc-ccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCc
Q 000399 1436 MLNSN-TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1514 (1566)
Q Consensus 1436 ~~~~~-~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~ 1514 (1566)
-.+. ++..+|.+++-+++ |..+++|+..+-||+||.++++.+..++|| +..|+.+..+
T Consensus 164 -~sl~sG~k~siYSLA~N~t----------~t~ivsGgtek~lr~wDprt~~kimkLrGH------TdNVr~ll~~---- 222 (735)
T KOG0308|consen 164 -NSLGSGPKDSIYSLAMNQT----------GTIIVSGGTEKDLRLWDPRTCKKIMKLRGH------TDNVRVLLVN---- 222 (735)
T ss_pred -ccCCCCCccceeeeecCCc----------ceEEEecCcccceEEeccccccceeeeecc------ccceEEEEEc----
Confidence 0011 45567778877776 889999999999999999999999999987 4455666654
Q ss_pred ccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1515 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1515 ~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
.||..++|||+||+|++||+...+++.++..|+..|.++.-+|+
T Consensus 223 -------dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~s 266 (735)
T KOG0308|consen 223 -------DDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPS 266 (735)
T ss_pred -------CCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCC
Confidence 66789999999999999999999999999999999999988764
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-20 Score=218.37 Aligned_cols=269 Identities=16% Similarity=0.166 Sum_probs=190.1
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEe-eeeehhhhhccCcceeeeecCcceEEEeeccCCCccccee
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~-~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVr 1356 (1566)
..|+-.|.+ |-|.-.+ -++|||+|++|.+|.-. -..-.+++.|..-|+|+.|+|||..|+|+|. ||+|.
T Consensus 144 ~GhSr~ins~~~KpsRPf----Ri~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs----Dgki~ 215 (603)
T KOG0318|consen 144 TGHSRRINSVDFKPSRPF----RIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS----DGKIY 215 (603)
T ss_pred eccceeEeeeeccCCCce----EEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC----CccEE
Confidence 347777776 5554432 19999999999988743 2356788899999999999999999999998 99999
Q ss_pred eEEecccccccccc---cccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccc---c---------cccc
Q 000399 1357 KWELTRINCVSGYY---GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM---D---------SLHG 1419 (1566)
Q Consensus 1357 lWDl~tg~~i~tl~---gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~---~---------~~~~ 1419 (1566)
+||-.+|+.+..+. +|++.|++|+|+|++.+++++ |.++||||+.++++++++..... + .+.+
T Consensus 216 iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lIt 295 (603)
T KOG0318|consen 216 IYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLIT 295 (603)
T ss_pred EEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEE
Confidence 99999999999887 899999999999999998654 99999999999999998864322 0 1111
Q ss_pred CCCCCcccccccCCCC-CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee-ccCCcc
Q 000399 1420 GSPSSSISKINTDQVG-MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW-RGEPTE 1497 (1566)
Q Consensus 1420 ~~~~~~~~~~~~~~~~-~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~-~~h~~~ 1497 (1566)
.+-++.+..++.+... ...+.+|...|++++.+| |++++++|+.||.|.-||..+|..-+.. ++|.+.
T Consensus 296 VSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~----------d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nq 365 (603)
T KOG0318|consen 296 VSLSGTINYLNPSDPSVLKVISGHNKSITALTVSP----------DGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQ 365 (603)
T ss_pred EEcCcEEEEecccCCChhheecccccceeEEEEcC----------CCCEEEeeccCceEEEEecCCccccccccccccce
Confidence 1112222222222222 222345666666666555 4899999999999999999887433211 111110
Q ss_pred c------------------------------------CchhhHHHhhccCCC---------------------------c
Q 000399 1498 L------------------------------------GFPSLVSAICACGSE---------------------------K 1514 (1566)
Q Consensus 1498 v------------------------------------~~~~~V~sv~~s~~~---------------------------~ 1514 (1566)
+ .......+++..+++ .
T Consensus 366 I~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~ 445 (603)
T KOG0318|consen 366 IKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYE 445 (603)
T ss_pred EEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccc
Confidence 0 000011122222221 1
Q ss_pred ccCCCcccchhHHHhccCCCceeEEeeccCce--eEEeeccCceeeEeeeeccC
Q 000399 1515 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV--IASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1515 ~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~--l~~l~gH~~~V~~VafspdG 1566 (1566)
..+.+.+|++..+|.|+.||.|++|.+..+.. ......|.++|++|+|||||
T Consensus 446 ~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~ 499 (603)
T KOG0318|consen 446 SSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDG 499 (603)
T ss_pred cceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCC
Confidence 12244789999999999999999999986553 33466799999999999997
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.5e-22 Score=234.85 Aligned_cols=195 Identities=14% Similarity=0.155 Sum_probs=157.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...|...+.||+|+||.||++++. .++..+|+|.+....... ....++. +|+.+++.++||||++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~ 89 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVKFLQRIKHPNSIE 89 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEc------CCCcEEEEEEEecCCCCchHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 345889999999999999988752 467899999987542222 1222333 5999999999999999
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+++++..+...|+||||++++|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 90 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~--~~kl 166 (317)
T cd06635 90 YKGCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVKL 166 (317)
T ss_pred EEEEEeeCCeEEEEEeCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC--CEEE
Confidence 99999999999999999999888887632 34578888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||++...... ....++..|+|||++. ...++..+|+|+.|++ .+..+.|+.
T Consensus 167 ~dfg~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvi-------l~el~~g~~ 222 (317)
T cd06635 167 ADFGSASIASPA---------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-------CIELAERKP 222 (317)
T ss_pred ecCCCccccCCc---------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHH-------HHHHHhCCC
Confidence 999998743310 1123778899999874 4457789999999988 666777775
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.4e-22 Score=230.57 Aligned_cols=191 Identities=17% Similarity=0.171 Sum_probs=148.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|.+.+.||+|+||.||+|.+.- .......+|+|...... .....+.+. +|+.+++.++||||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~~~h~~i~~~~ 73 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMS---PENEKIAVAVKTCKNCT-SPSVREKFL--------QEAYIMRQFDHPHIVKLI 73 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEec---CCCCCcceEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCchhcee
Confidence 468899999999999999887421 11234568888875432 122223344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+ +..|+||||+++ +|.+++... ...++...++.++.|++.||.|||++|++||||||+||+++.++ .+||+
T Consensus 74 ~~~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l~ 149 (270)
T cd05056 74 GVITE-NPVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD--CVKLG 149 (270)
T ss_pred EEEcC-CCcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC--CeEEc
Confidence 98875 557899999986 999999743 23478888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++......... .....++..|+|||.+....++...|+|+.|++
T Consensus 150 d~g~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 197 (270)
T cd05056 150 DFGLSRYLEDESYYK----------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 197 (270)
T ss_pred cCceeeeccccccee----------cCCCCccccccChhhhccCCCCchhhhHHHHHH
Confidence 999998654211000 001123457999999988888999999999987
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.9e-22 Score=220.11 Aligned_cols=185 Identities=19% Similarity=0.268 Sum_probs=151.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.-++.+|.|+- .|--|-+. -.+..||+|.+..........+ ++.||..+|..++|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~------v~~~~v~ikk~~~pf~n~~~ak--------ra~rel~l~~~v~~~nii~l 80 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQ------VLGRPVAIKKLSRPFQNQTHAK--------RAYRELKLMKCVNHKNIISL 80 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchh------hccCceehhhhcCccccCccch--------hhhhhhhhhhhhcccceeee
Confidence 457888889998888 44444442 3578899998776533222222 55689999999999999999
Q ss_pred ccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 241 LGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 241 ~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+.+|.-. ..+|+|||+|..+|...+. ..+.-..++++++|++.|++|||+.||+||||||+||++..++
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~- 155 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELMDANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC- 155 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhhhhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh-
Confidence 9999654 3799999999999999887 2256677899999999999999999999999999999999999
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.+||.|||+|+..... ...+..+.|.+|+|||++.+..|.+.+|+|+.|||
T Consensus 156 -~lKi~dfg~ar~e~~~------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci 206 (369)
T KOG0665|consen 156 -TLKILDFGLARTEDTD------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 206 (369)
T ss_pred -heeeccchhhcccCcc------------cccCchhheeeccCchheeccCCcccchhhhhhhH
Confidence 7999999999854420 12345568899999999999999999999999999
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-22 Score=238.11 Aligned_cols=200 Identities=15% Similarity=0.137 Sum_probs=150.7
Q ss_pred eeeeec--chhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccc
Q 000399 168 AFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~ 245 (1566)
..||+| +||+||++++. .++..||+|++.......... +.+. +|+.+++.++||||++++++|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~------~~~~~vaiK~~~~~~~~~~~~-~~~~-------~e~~~~~~l~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHT------PTGTLVTVRITDLENCTEEHL-KALQ-------NEVVLSHFFRHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEEc------CCCcEEEEEEeccccCCHHHH-HHHH-------HHHHHHHhCCCCCcceEeeeEe
Confidence 456766 89999998863 578999999987543332222 2232 6888899999999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
.++..|+||||+.+ +|.+++.......+++..++.++.|++.||+|||++||+||||||+|||++.++ .+|++|||.
T Consensus 70 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~--~~~~~~~~~ 147 (328)
T cd08226 70 TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDG--LVSLSGLSH 147 (328)
T ss_pred cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCC--cEEEechHH
Confidence 99999999999997 999998754344578888999999999999999999999999999999999888 799999986
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+.......... ...........++..|+|||++.+ ..++..+|+|+.|++ .+..++|+.
T Consensus 148 ~~~~~~~~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~-------l~el~~g~~ 208 (328)
T cd08226 148 LYSLVRNGQKA----KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGIT-------ACELATGRV 208 (328)
T ss_pred HhhhhccCccc----cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHH-------HHHHHhCCC
Confidence 54322100000 000000011224566999999876 347789999999987 566667764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.8e-22 Score=228.63 Aligned_cols=205 Identities=16% Similarity=0.095 Sum_probs=159.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|++.+.||+|+||.||+|.... ....++..+|+|.+...... ....++. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~~~~avK~~~~~~~~-~~~~~~~--------~ei~~l~~l~~~~i~~~~ 72 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDP--LGDNTGEQVAVKSLNHSGEE-QHRSDFE--------REIEILRTLDHENIVKYK 72 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecC--CCCCCceEEEEEEeccccch-HHHHHHH--------HHHHHHHhCCCCChheEE
Confidence 468899999999999999987421 11245788999998764332 1233344 589999999999999999
Q ss_pred ccccc--cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 242 GLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 242 ~~~~~--~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++.. ....++||||+++ +|.+++...+ ..++...+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~ 149 (284)
T cd05038 73 GVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED--LVK 149 (284)
T ss_pred eeeecCCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEE
Confidence 99877 5589999999986 9999997432 2478888899999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++.......... ......++..|++||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 150 l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~-------l~el~tg~~p 211 (284)
T cd05038 150 ISDFGLAKVLPEDKDYYY--------VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVT-------LYELFTYGDP 211 (284)
T ss_pred EcccccccccccCCccee--------ccCCCCCcccccCcHHHccCCCCcccchHHHhhh-------hheeeccCCC
Confidence 999999986542111000 0001124456999999988888889999999988 6667777643
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-21 Score=230.07 Aligned_cols=207 Identities=16% Similarity=0.241 Sum_probs=184.1
Q ss_pred cccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccccccccccccccccc
Q 000399 1299 DFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1566)
Q Consensus 1299 ~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~ 1377 (1566)
+++++||.|-.+.+|.+... .+..+.+|+.+|.+|.|++++.++++|+. ||+||+||+..++.++++.||...+.
T Consensus 41 r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Llaagsa----sgtiK~wDleeAk~vrtLtgh~~~~~ 116 (825)
T KOG0267|consen 41 RSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSA----SGTIKVWDLEEAKIVRTLTGHLLNIT 116 (825)
T ss_pred eeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhccccc----CCceeeeehhhhhhhhhhhccccCcc
Confidence 45999999999999998653 66779999999999999999999999999 99999999999999999999999999
Q ss_pred ceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchh
Q 000399 1378 DICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455 (1566)
Q Consensus 1378 sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~ 1455 (1566)
+|.|+|-+.+.++| |+.+++||.+...|...+.+| ...|..+.|+|+
T Consensus 117 sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~------------------------------~~vv~~l~lsP~- 165 (825)
T KOG0267|consen 117 SVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSH------------------------------TRVVDVLRLSPD- 165 (825)
T ss_pred eeeeccceEEeccccccccceehhhhccCceeeecCC------------------------------cceeEEEeecCC-
Confidence 99999999999887 999999999988898887764 445677788876
Q ss_pred HHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCc
Q 000399 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQ 1535 (1566)
Q Consensus 1456 ~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~ 1535 (1566)
|+++++|+.|.++++||...|+...+|+.|. +.|.++.++| ..-++++||.|++
T Consensus 166 ---------Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e------~~v~sle~hp-----------~e~Lla~Gs~d~t 219 (825)
T KOG0267|consen 166 ---------GRWVASGGEDNTVKIWDLTAGKLSKEFKSHE------GKVQSLEFHP-----------LEVLLAPGSSDRT 219 (825)
T ss_pred ---------CceeeccCCcceeeeeccccccccccccccc------ccccccccCc-----------hhhhhccCCCCce
Confidence 9999999999999999999999999999773 4445555554 4458999999999
Q ss_pred eeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1536 CRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1536 I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
+++||+++-+.+...+.-...|.+++|+|+|
T Consensus 220 v~f~dletfe~I~s~~~~~~~v~~~~fn~~~ 250 (825)
T KOG0267|consen 220 VRFWDLETFEVISSGKPETDGVRSLAFNPDG 250 (825)
T ss_pred eeeeccceeEEeeccCCccCCceeeeecCCc
Confidence 9999999999999988888899999999986
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.4e-21 Score=202.35 Aligned_cols=185 Identities=25% Similarity=0.384 Sum_probs=160.4
Q ss_pred eeeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCc
Q 000399 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1394 (1566)
Q Consensus 1317 ~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--Dgt 1394 (1566)
+..+..+..|.++|+++.|+-||++.+|++. |+|||+|+...|.++++|.||...|.+++.+.+...++|| |..
T Consensus 7 tkr~~~l~~~qgaV~avryN~dGnY~ltcGs----drtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 7 TKRLSILDCAQGAVRAVRYNVDGNYCLTCGS----DRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred chhceeecccccceEEEEEccCCCEEEEcCC----CceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce
Confidence 3456778899999999999999999999998 9999999999999999999999999999999999999988 999
Q ss_pred EEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecC
Q 000399 1395 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1474 (1566)
Q Consensus 1395 IkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~D 1474 (1566)
|.+||+.||+.++.+.+| ...|+.+.|+.+ ...+++||.|
T Consensus 83 v~vwDV~TGkv~Rr~rgH------------------------------~aqVNtV~fNee----------sSVv~SgsfD 122 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGH------------------------------LAQVNTVRFNEE----------SSVVASGSFD 122 (307)
T ss_pred EEEEEcccCeeeeecccc------------------------------cceeeEEEecCc----------ceEEEecccc
Confidence 999999999999999886 456888888876 7899999999
Q ss_pred ceEEEEEccCC--ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec
Q 000399 1475 GSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1566)
Q Consensus 1475 gtIrlWDi~tg--~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g 1552 (1566)
.++|+||.|+. +++..+... ...|.+|.++ +..|++||.||++|.||+|.|+....+-
T Consensus 123 ~s~r~wDCRS~s~ePiQildea------~D~V~Si~v~-------------~heIvaGS~DGtvRtydiR~G~l~sDy~- 182 (307)
T KOG0316|consen 123 SSVRLWDCRSRSFEPIQILDEA------KDGVSSIDVA-------------EHEIVAGSVDGTVRTYDIRKGTLSSDYF- 182 (307)
T ss_pred ceeEEEEcccCCCCccchhhhh------cCceeEEEec-------------ccEEEeeccCCcEEEEEeecceeehhhc-
Confidence 99999999964 566666544 3344555544 2468999999999999999999887775
Q ss_pred cCceeeEeeeeccC
Q 000399 1553 HDGYVTKVRIISKR 1566 (1566)
Q Consensus 1553 H~~~V~~VafspdG 1566 (1566)
..+|++++|++||
T Consensus 183 -g~pit~vs~s~d~ 195 (307)
T KOG0316|consen 183 -GHPITSVSFSKDG 195 (307)
T ss_pred -CCcceeEEecCCC
Confidence 4699999999986
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-22 Score=228.17 Aligned_cols=189 Identities=18% Similarity=0.233 Sum_probs=154.5
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccCc
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~~ 249 (1566)
||+|+||.||+|++. .++..+|+|++.+.........+.+. +|+.+++.++||||+++++.+.+...
T Consensus 1 lg~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (262)
T cd05572 1 LGVGGFGRVELVKVK------SKNRTFALKCVKKRHIVETGQQEHIF-------SEKEILEECNHPFIVKLYRTFKDKKY 67 (262)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEEehhcchhhhHHHHHH-------HHHHHHHhCCCCCEeeeeeeEEcCCc
Confidence 699999999998863 46889999998765433222222222 69999999999999999999999999
Q ss_pred eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcc
Q 000399 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 250 l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~ 328 (1566)
+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+++.++ .+||+|||+++..
T Consensus 68 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~--~~~l~df~~~~~~ 143 (262)
T cd05572 68 IYMLMEYCLGGELWTILRD--RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG--YVKLVDFGFAKKL 143 (262)
T ss_pred cEEEEecCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC--CEEEeeCCccccc
Confidence 9999999986 99999973 34578888999999999999999999999999999999999988 7999999999865
Q ss_pred ccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 329 SIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.... . .....+++.|++||.+.+..++...|.|+.|++ .+..+.|..
T Consensus 144 ~~~~-----~-------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~ 190 (262)
T cd05572 144 KSGQ-----K-------TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGIL-------LYELLTGRP 190 (262)
T ss_pred Cccc-----c-------cccccCCcCccChhHhcCCCCCChhhhhhhHHH-------HHHHHhCCC
Confidence 4210 0 011237788999999988888889999999987 566666754
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.83 E-value=9.2e-21 Score=236.12 Aligned_cols=231 Identities=20% Similarity=0.268 Sum_probs=176.9
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEe-e-eeehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-A-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~-~-~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
..|..+|.+ |+|+|.+ +++|+.|+++++||+. . ..+++++||+..|++++|+|++++++|||. |++|
T Consensus 200 ~~h~~~v~~~~fs~d~~~-----l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~----D~tv 270 (456)
T KOG0266|consen 200 SGHTRGVSDVAFSPDGSY-----LLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSD----DGTV 270 (456)
T ss_pred cccccceeeeEECCCCcE-----EEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecC----CCcE
Confidence 568899988 8999998 9999999999999994 3 388999999999999999999999999998 9999
Q ss_pred eeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCc--EEEEeeccccc--ccc-----------
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGK--LLSVFAEQSMD--SLH----------- 1418 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~--~l~~l~~h~~~--~~~----------- 1418 (1566)
+|||+.+++|+.++.+|.+.|++++|++++..++++ |+.|+|||+.++. ++..+..+... ...
T Consensus 271 riWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll 350 (456)
T KOG0266|consen 271 RIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLL 350 (456)
T ss_pred EEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEE
Confidence 999999999999999999999999999999999766 9999999999999 56666654433 111
Q ss_pred cCCCCCcccccccCCCCC-CCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcc
Q 000399 1419 GGSPSSSISKINTDQVGM-LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTE 1497 (1566)
Q Consensus 1419 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~ 1497 (1566)
.+..+..+.+|+...... ....+|...+ ...|++ ..+++|+.+++|+.|+.|.+||+.++..+..+.+|.
T Consensus 351 ~~~~d~~~~~w~l~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~-- 421 (456)
T KOG0266|consen 351 SASLDRTLKLWDLRSGKSVGTYTGHSNLV-RCIFSP------TLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHS-- 421 (456)
T ss_pred EecCCCeEEEEEccCCcceeeecccCCcc-eeEecc------cccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCC--
Confidence 122222333343332222 2223343332 111222 235679999999999999999999999998888872
Q ss_pred cCchhhHHHhhccCCCcccCCCcccchhHHHhcc--CCCceeEEeec
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL--SSGQCRLFDVR 1542 (1566)
Q Consensus 1498 v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs--~Dg~I~lWD~~ 1542 (1566)
...|..+.++ +...++++++ .|+.+++|...
T Consensus 422 ---~~~~~~~~~~-----------~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 422 ---KAAVSDLSSH-----------PTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ---CCceeccccC-----------CCcCeeeecCcCCCceEEEecCC
Confidence 2233444444 5556788887 78899999753
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.1e-22 Score=226.10 Aligned_cols=183 Identities=17% Similarity=0.140 Sum_probs=140.6
Q ss_pred eeeeecchhhHHHHHhhhccCC----cchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGC----LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~----~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
+.||+|+||.||+|.+...... ......+++|.+...... ...+. +|+.+|+.++||||++++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~~~ 69 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFF--------ETASLMSQLSHKHLVKLYGV 69 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHH--------HHHHHHHcCCCcchhheeeE
Confidence 4699999999999886321000 011235677776543211 23343 58899999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-----hhh
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----SWL 317 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-----~~v 317 (1566)
+.. ...++||||+++ +|.+++...+. .++...+..++.||+.||.|||++||+||||||+|||++.++. ..+
T Consensus 70 ~~~-~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 70 CVR-DENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred Eec-CCcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeE
Confidence 988 778999999996 99999974322 5778888999999999999999999999999999999987762 148
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc--chhhcccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM--DWHSQFNRWWRGEL 378 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~--~y~~~~d~Ws~G~i 378 (1566)
||+|||+++.... .....++..|+|||++.+. .++...|+|+.|++
T Consensus 148 kl~Dfg~a~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~ 195 (259)
T cd05037 148 KLSDPGIPITVLS---------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTT 195 (259)
T ss_pred EeCCCCccccccc---------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence 9999999985432 0012255679999998776 67889999999987
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.83 E-value=8.3e-22 Score=229.59 Aligned_cols=196 Identities=21% Similarity=0.227 Sum_probs=155.2
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc---cCCCcccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAPV 240 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l---~HpNIV~l 240 (1566)
|++.+.||+|+||.||+|+++ .++..+|+|.+............+. +|+.+++++ +||||+++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~~i~~~ 66 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDL------NTGRFVALKKVRVPLSEEGIPLSTL--------REIALLKQLESFEHPNIVRL 66 (287)
T ss_pred CeEEEEecccCceEEEEEEEC------CCCCEEEEEEeccccccchhhhhHH--------HHHHHHHHhhccCCCCcceE
Confidence 678899999999999998863 3578899999875432211111222 466655544 69999999
Q ss_pred cccccccCc-----eeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 241 LGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 241 ~~~~~~~~~-----l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++++...+. ++++|||++++|.+++.......+++..++.++.|++.||.|||+++++|+||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~-- 144 (287)
T cd07838 67 LDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG-- 144 (287)
T ss_pred EEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC--
Confidence 999988776 9999999999999988754444578889999999999999999999999999999999999998
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||+++....... .....++..|+|||++.+..++...|.|+.|++ .+..++|++
T Consensus 145 ~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~-------l~~l~~~~~ 204 (287)
T cd07838 145 QVKIADFGLARIYSFEMA------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCI-------FAELFRRRP 204 (287)
T ss_pred CEEEeccCcceeccCCcc------------cccccccccccChHHhccCCCCCcchhhhHHHH-------HHHHHhCCC
Confidence 799999999875432100 112236778999999988888999999999987 566666654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.6e-22 Score=229.73 Aligned_cols=196 Identities=15% Similarity=0.150 Sum_probs=158.5
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+-|++.+.||+|+||.||+|.+. .++..+|+|.+...... .....+. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~------~~~~~~aiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~ 68 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDN------RTQKVVAIKIIDLEEAE-DEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEEC------CCCcEEEEEEeccccch-HHHHHHH--------HHHHHHHhcCCCCEeEEE
Confidence 34888999999999999988753 46789999987643221 2222333 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++..|+||||+++ +|.+++.. ..++...+..++.|++.|+.|||++|++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~--~~~l~ 143 (277)
T cd06641 69 GSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLA 143 (277)
T ss_pred EEEEeCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC--CEEEe
Confidence 999999999999999997 99988862 3468888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......++..|++||.+.+..++...|.|+.|++ .+..+.|+.+
T Consensus 144 dfg~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~p 200 (277)
T cd06641 144 DFGVAGQLTDTQI-----------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGIT-------AIELAKGEPP 200 (277)
T ss_pred ecccceecccchh-----------hhccccCCccccChhhhccCCCCchhhHHHHHHH-------HHHHHcCCCC
Confidence 9999875432100 0112247788999999988888889999999987 5666677754
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-20 Score=206.55 Aligned_cols=248 Identities=15% Similarity=0.185 Sum_probs=183.8
Q ss_pred ccCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccc
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1566)
Q Consensus 1288 ~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~ 1364 (1566)
.|||-.. .+++.||+|++||+|+++.. .-+....|.++|.+++|+.||+.+++|+. |+.+++||+.+++
T Consensus 34 ~FSP~~~----~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~----Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 34 AFSPQAD----NLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGC----DKQAKLWDLASGQ 105 (347)
T ss_pred EeccccC----ceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeecc----CCceEEEEccCCC
Confidence 4888221 23889999999999999863 23566789999999999999999999998 9999999999996
Q ss_pred cccccccccccccceEEeecCC--ceeec--cCcEEEeecCCCcEEEEeeccccc--------ccccCCCCCcccccccC
Q 000399 1365 CVSGYYGHEEVVNDICVLSSSG--RIASC--DGTLHVWNSQTGKLLSVFAEQSMD--------SLHGGSPSSSISKINTD 1432 (1566)
Q Consensus 1365 ~i~tl~gH~~~V~sVafsp~g~--~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~--------~~~~~~~~~~~~~~~~~ 1432 (1566)
+..+..|.++|.++.|-+... .|++| |++||.||.+...++.+++-+..- ....+..+..+.++...
T Consensus 106 -~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~ 184 (347)
T KOG0647|consen 106 -VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLE 184 (347)
T ss_pred -eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcC
Confidence 455678999999999998877 56777 999999999999888887654321 11111111222222111
Q ss_pred CCCCCCCc----ccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC--ceeeeeccCCcccCchh---h
Q 000399 1433 QVGMLNSN----TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG--QKLHLWRGEPTELGFPS---L 1503 (1566)
Q Consensus 1433 ~~~~~~~~----~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg--~~l~~~~~h~~~v~~~~---~ 1503 (1566)
+. ...+. ...-.+.||+..++ ....+.|+-.|.+-+-.+..+ +.-.+|+.|.......+ .
T Consensus 185 n~-~te~k~~~SpLk~Q~R~va~f~d----------~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYa 253 (347)
T KOG0647|consen 185 NP-PTEFKRIESPLKWQTRCVACFQD----------KDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYA 253 (347)
T ss_pred CC-cchhhhhcCcccceeeEEEEEec----------CCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEE
Confidence 10 01111 12344667766655 566799999999999888876 66778888875322122 4
Q ss_pred HHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1504 VSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1504 V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
|++|+|+| .-..|+|.++||+..+||-.....+.+.+.|..+|++.+|+.+|
T Consensus 254 VNsi~FhP-----------~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G 305 (347)
T KOG0647|consen 254 VNSIAFHP-----------VHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNG 305 (347)
T ss_pred ecceEeec-----------ccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCC
Confidence 55666655 33589999999999999999999999999999999999999887
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-21 Score=231.20 Aligned_cols=199 Identities=18% Similarity=0.237 Sum_probs=168.4
Q ss_pred ccCCCceeccCCCCCCCCCcccccccCccCCCCceEee-------e---eehhhhhccCcceeeeecCcceEEEeeccCC
Q 000399 1280 MKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKA-------S---ILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1566)
Q Consensus 1280 ~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~-------~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~ 1349 (1566)
..|++-|.+..- ...++.|++++|.|+++++|++.. . +..+-+.|.+.|+||+++|++.+++|||.
T Consensus 408 ~gH~~svgava~--~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~Sq-- 483 (775)
T KOG0319|consen 408 NGHTNSVGAVAG--SKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQ-- 483 (775)
T ss_pred cccccccceeee--cccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEeccc--
Confidence 357777766322 113457899999999999999875 1 22466789999999999999999999998
Q ss_pred CcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccc
Q 000399 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1350 ~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~ 1427 (1566)
|+|.+||+++.+....++.||+..|+||.|++..+.+++| |+|||||.+.++.|+++|.+|.
T Consensus 484 --DktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~-------------- 547 (775)
T KOG0319|consen 484 --DKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHT-------------- 547 (775)
T ss_pred --ccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcc--------------
Confidence 9999999999999999999999999999999999999766 9999999999999999999874
Q ss_pred ccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHh
Q 000399 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1566)
Q Consensus 1428 ~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv 1507 (1566)
..|..++|-.+ |+.|++|+.||-|++|++.++.|+.++.+|. +.|.++
T Consensus 548 ----------------~aVlra~F~~~----------~~qliS~~adGliKlWnikt~eC~~tlD~H~------DrvWaL 595 (775)
T KOG0319|consen 548 ----------------SAVLRASFIRN----------GKQLISAGADGLIKLWNIKTNECEMTLDAHN------DRVWAL 595 (775)
T ss_pred ----------------ceeEeeeeeeC----------CcEEEeccCCCcEEEEeccchhhhhhhhhcc------ceeEEE
Confidence 44666666655 8999999999999999999999999999884 445555
Q ss_pred hccCCCcccCCCcccchhHHHhccCCCceeEEee
Q 000399 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1508 ~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~ 1541 (1566)
..+ +.+..++||+.||.|.+|.=
T Consensus 596 ~~~-----------~~~~~~~tgg~Dg~i~~wkD 618 (775)
T KOG0319|consen 596 SVS-----------PLLDMFVTGGGDGRIIFWKD 618 (775)
T ss_pred eec-----------CccceeEecCCCeEEEEeec
Confidence 554 45568999999999999953
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-21 Score=233.37 Aligned_cols=197 Identities=14% Similarity=0.138 Sum_probs=158.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
..+.|...+.||+|+||+||+|++. .++..+|+|.+........ ....+. +|+.+++.++||||+
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv 84 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNS------HTNEVVAVKKMSYSGKQTNEKWQDII--------KEVKFLQQLKHPNTI 84 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEEC------CCCcEEEEEEEeccccCchHHHHHHH--------HHHHHHHhCCCCCCc
Confidence 3445888899999999999998753 4688999999875433222 112233 589999999999999
Q ss_pred cccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++++.+....|+||||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+|
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~--~~k 161 (313)
T cd06633 85 EYKGCYLKEHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVK 161 (313)
T ss_pred cEEEEEEeCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC--CEE
Confidence 999999999999999999999888888642 34578888899999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||++..... .....|+..|+|||++. ...++..+|+|+.|++ .+..+.|+.+
T Consensus 162 L~dfg~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvi-------l~el~~g~~p 219 (313)
T cd06633 162 LADFGSASKSSP---------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-------CIELAERKPP 219 (313)
T ss_pred EeecCCCcccCC---------------CCCccccccccChhhccccCCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999999864221 01124778899999984 3557788999999987 5566777653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-22 Score=230.59 Aligned_cols=194 Identities=18% Similarity=0.203 Sum_probs=160.9
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|+..+.||+|+||.||+|.++ .++..+|+|.+..... .....+++ +|+++++.++||||+++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~-~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHR------PTGKIMAVKTIRLEIN-EAIQKQIL--------RELDILHKCNSPYIVGFYG 66 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEc------CCCcEEEEEEEecccC-hHHHHHHH--------HHHHHHHHCCCCchhhhhe
Confidence 6888999999999999998863 4688899999876432 22233444 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
.+..++.+++|+||+++ +|.+++...+ ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~--~~~l~ 143 (265)
T cd06605 67 AFYNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG--QIKLC 143 (265)
T ss_pred eeecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC--CEEEe
Confidence 99999999999999996 9999997432 567888899999999999999999 9999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||.+........ ....++..|+|||.+.+..++...|+|+.|++ .+..+.|+.
T Consensus 144 d~g~~~~~~~~~~-------------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~ 197 (265)
T cd06605 144 DFGVSGQLVNSLA-------------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLS-------LIELATGRF 197 (265)
T ss_pred ecccchhhHHHHh-------------hcccCChhccCHHHHcCCCCCchhhHHHHHHH-------HHHHHhCCC
Confidence 9999875431100 00237788999999988888999999999987 666777764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-21 Score=228.19 Aligned_cols=198 Identities=21% Similarity=0.238 Sum_probs=157.6
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNK------KTGELVALKKIRMENEKEGFPITAI--------REIKLLQKLRHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEEC------CCCeEEEEEEEecccccccchHHHH--------HHHHHHHhccCCCeeeheee
Confidence 678899999999999998853 4578899999986531222122233 59999999999999999999
Q ss_pred cccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 244 LKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 244 ~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+... +..++||||++++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+||++++++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~--~~~l~d 143 (287)
T cd07840 67 VTSKGKGSIYMVFEYMDHDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG--VLKLAD 143 (287)
T ss_pred EecCCCCcEEEEeccccccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC--CEEEcc
Confidence 9888 899999999999999988743 24578889999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++........ ......++..|+|||.+.+ ..++.+.|+|+.|++ .+..+.|+.+
T Consensus 144 ~g~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~-------l~el~t~~~p 201 (287)
T cd07840 144 FGLARPYTKRNSA----------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCI-------LAELFLGKPI 201 (287)
T ss_pred ccceeeccCCCcc----------cccccccccccCCceeeEccccCChHHHHHHHHHH-------HHHHHhCCCC
Confidence 9999865431110 0011235678999997754 457889999999987 6666777653
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-21 Score=226.95 Aligned_cols=195 Identities=19% Similarity=0.210 Sum_probs=152.0
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
+.....||+|+||.||+|++. .++..+|+|.+.... ....+.+. +|+.+++.++||||++++++
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~------~~~~~v~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 73 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDL------STQVRIAIKEIPERD--SRYVQPLH--------EEIALHSYLKHRNIVQYLGS 73 (268)
T ss_pred CCceEEEecCCceEEEEeEec------CCCcEEEEEEecCCC--HHHHHHHH--------HHHHHHHhcCCCCeeeeeee
Confidence 334568999999999998752 467889999876532 22222333 59999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCccccc--chhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc-cchhhhhh
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYI 319 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l--~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~-~~~~~vKL 319 (1566)
+...+..++||||+++ +|.+++... ...+ ++..++.++.||+.||.|||++||+||||||+||+++. ++ .+||
T Consensus 74 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~--~~~l 150 (268)
T cd06624 74 DSENGFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG--VVKI 150 (268)
T ss_pred eccCCEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--eEEE
Confidence 9999999999999986 999999742 2233 67778889999999999999999999999999999986 44 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc--hhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........ ......++..|+|||++.+.. ++...|+|+.|++ .+..++|+.+
T Consensus 151 ~dfg~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvv-------l~~l~~g~~p 210 (268)
T cd06624 151 SDFGTSKRLAGINP-----------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCT-------IVEMATGKPP 210 (268)
T ss_pred ecchhheecccCCC-----------ccccCCCCccccChhhhccccccCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 99999875432100 001123678899999986543 7789999999987 6666777654
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-21 Score=230.11 Aligned_cols=197 Identities=17% Similarity=0.191 Sum_probs=158.2
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|+..+.||.|++|.||+|.+. .++..+|+|.+...... ....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~ 65 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLK------NTGMIFALKTITTDPNP-DLQKQIL--------RELEINKSCKSPYIVKYY 65 (287)
T ss_pred CceEEEEEeccCCceEEEEEEEC------CCCeEEEEEEEecCCch-HHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 36889999999999999998863 46788999998754221 2223344 599999999999999999
Q ss_pred cccccc--CceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 242 GLLKTS--GLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 242 ~~~~~~--~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++... +.+|+||||+++ +|.+++... ....+++..+..++.||+.||.|||+.|++||||+|+||+++.++ .
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~--~ 143 (287)
T cd06621 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG--Q 143 (287)
T ss_pred eEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC--e
Confidence 988643 478999999987 998887531 234478888999999999999999999999999999999999988 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++|+|||++....... .....++..|+|||.+.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 144 ~~l~dfg~~~~~~~~~-------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 202 (287)
T cd06621 144 VKLCDFGVSGELVNSL-------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLT-------LLEVAQNRFP 202 (287)
T ss_pred EEEeeccccccccccc-------------cccccCCccccCHHHhcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999999987543100 011236778999999988889999999999988 6677777654
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-21 Score=225.72 Aligned_cols=196 Identities=18% Similarity=0.174 Sum_probs=162.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+. .++..+++|++...... .....+. +|+.++..++||||+++++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~vk~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHK------PTGKIYALKKIHVDGDE-EFRKQLL--------RELKTLRSCESPYVVKCYG 66 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEc------CCCcEEEEEEeccCcch-HHHHHHH--------HHHHHHHhcCCCCeeeEEE
Confidence 6889999999999999998863 46889999998764322 2223344 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++...+..++||||+++ +|.+++.. ...+++..+..++.|++.|+.|||+ +|++||||+|+||+++.++ .++|+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~--~~~l~ 142 (264)
T cd06623 67 AFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG--EVKIA 142 (264)
T ss_pred EEccCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC--CEEEc
Confidence 99999999999999996 99999974 3567889999999999999999999 9999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++........ .....++..|+|||.+.+..++...|.|+.|++ .+..+.|+.+
T Consensus 143 df~~~~~~~~~~~~-----------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i-------l~~l~tg~~p 199 (264)
T cd06623 143 DFGISKVLENTLDQ-----------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLT-------LLECALGKFP 199 (264)
T ss_pred cCccceecccCCCc-----------ccceeecccccCHhhhCCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99998865421110 012237788999999988888889999999987 7777777654
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-21 Score=227.65 Aligned_cols=195 Identities=13% Similarity=0.208 Sum_probs=156.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc---CCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~---HpNIV~ 239 (1566)
.|++++.||+|+||.||+|.+. .++..+|+|.+.... ......++. +|+.+++.++ ||||++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~~~~vi~ 66 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHV------PTGRVVALKIINLDT-PDDDVSDIQ--------REVALLSQLRQSQPPNITK 66 (277)
T ss_pred hhhhhhheeccCCceEEEEEEc------CCCcEEEEEEecCCC-CchhHHHHH--------HHHHHHHHhccCCCCCeee
Confidence 4888999999999999998863 568899999986532 222222333 5888888886 999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++......|+||||+++ +|.++++. ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++ .++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~--~~~ 141 (277)
T cd06917 67 YYGSYLKGPRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG--NVK 141 (277)
T ss_pred EeeeeeeCCEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC--CEE
Confidence 99999999999999999987 99999863 3578888999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||++........ ......|+..|+|||.+.+ ..++..+|.|+.|++ .+..++|+.+
T Consensus 142 l~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~-------l~~ll~g~~p 201 (277)
T cd06917 142 LCDFGVAALLNQNSS-----------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGIT-------IYEMATGNPP 201 (277)
T ss_pred EccCCceeecCCCcc-----------ccccccCCcceeCHHHhccCCccccchhHHHHHHH-------HHHHHhCCCC
Confidence 999999875442110 0112247888999998764 456789999999987 6667777764
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-22 Score=230.90 Aligned_cols=198 Identities=17% Similarity=0.192 Sum_probs=155.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+...... ..++. +|+.+++++ +||||++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~ni~~ 83 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNK------KDGSLAAVKILDPISDV---DEEIE--------AEYNILQSLPNHPNVVK 83 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEEC------CCCCEEEEEEecccccH---HHHHH--------HHHHHHHHhcCCCCeEE
Confidence 567999999999999999998753 56888999998653211 11222 578888888 7999999
Q ss_pred cccccccc-----CceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 240 VLGLLKTS-----GLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 240 l~~~~~~~-----~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
+++++... +..|+||||+++ +|.++++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~ 163 (291)
T cd06639 84 FYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC
Confidence 99998654 368999999987 999988631 2345788889999999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-----chhhccccccccccCCchhhhH
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-----DWHSQFNRWWRGELSNFEYLLF 386 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-----~y~~~~d~Ws~G~isnfeyL~~ 386 (1566)
++ .+||+|||+++....... ......++..|+|||++... .++.+.|+|+.|++ .
T Consensus 164 ~~--~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi-------~ 223 (291)
T cd06639 164 EG--GVKLVDFGVSAQLTSTRL-----------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT-------A 223 (291)
T ss_pred CC--CEEEeecccchhcccccc-----------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHH-------H
Confidence 88 699999999885442111 01123478889999987543 35778999999988 6
Q ss_pred HHhhccccc
Q 000399 387 LNKLAGRRW 395 (1566)
Q Consensus 387 ln~~agrs~ 395 (1566)
+..+.|+.+
T Consensus 224 ~el~~g~~p 232 (291)
T cd06639 224 IELGDGDPP 232 (291)
T ss_pred HHHhhCCCC
Confidence 677788753
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-21 Score=225.71 Aligned_cols=196 Identities=21% Similarity=0.269 Sum_probs=158.2
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|+..+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDK------KTGEIVALKKIRLDNEEEGIPSTAL--------REISLLKELKHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeeec------CCCcEEEEEEeccccccccccHHHH--------HHHHHHHhcCCCCHHHHHhh
Confidence 667889999999999998863 4688999999886532222222233 58899999999999999999
Q ss_pred ccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
+.+.+..++||||++++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~--~~~l~d~g 143 (282)
T cd07829 67 IHTERKLYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG--VLKLADFG 143 (282)
T ss_pred hhcCCceEEEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC--CEEEecCC
Confidence 99999999999999999999998432 4578899999999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+++........ .....++..|+|||.+.+. .++...|+|+.|++ .+..++|+.
T Consensus 144 ~~~~~~~~~~~-----------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~-------l~~l~~~~~ 197 (282)
T cd07829 144 LARAFGIPLRT-----------YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCI-------FAEMITGKP 197 (282)
T ss_pred cccccCCCccc-----------cCccccCcCcCChHHhcCCcCCCccccHHHHHHH-------HHHHHhCCC
Confidence 99864421110 0112256779999988766 77889999999987 666666654
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.3e-22 Score=236.58 Aligned_cols=195 Identities=17% Similarity=0.167 Sum_probs=160.6
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
-.++.++.++||+|.||+|++|.... -..+...||||.+..+.... ....|+ +|+.+|.+|+|||+|+
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~---psgk~V~VAVKclr~d~l~~-~mddfl--------rEas~M~~L~H~hliR 175 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQ---PSGKHVNVAVKCLRDDSLNA-IMDDFL--------REASHMLKLQHPHLIR 175 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccC---CCCcEEeEEEEeccCCccch-hHHHHH--------HHHHHHHhccCcceeE
Confidence 35578889999999999999988643 22356779999998765443 445566 5999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
|||+..+ ..+.||||+++. +|.+.|+......+.......|+.||+.||.||..+++|||||...|||+.... .||
T Consensus 176 LyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr--tVK 252 (1039)
T KOG0199|consen 176 LYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR--TVK 252 (1039)
T ss_pred Eeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc--eee
Confidence 9999988 778999999995 999999975666788888889999999999999999999999999999999877 799
Q ss_pred hcCcCCCCcccccccc-CCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 319 ICDKPLVGFNSIADWC-TIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~-~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+||||.|.....+++ ......+ -.-.|.|||.+....++.+.|.|..|+-
T Consensus 253 I~DFGLmRaLg~ned~Yvm~p~rk---------vPfAWCaPEsLrh~kFShaSDvWmyGVT 304 (1039)
T KOG0199|consen 253 ICDFGLMRALGENEDMYVMAPQRK---------VPFAWCAPESLRHRKFSHASDVWMYGVT 304 (1039)
T ss_pred eecccceeccCCCCcceEecCCCc---------CcccccCHhHhccccccccchhhhhhhh
Confidence 9999999976654332 1111111 2335889999999999999999999975
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-21 Score=224.07 Aligned_cols=199 Identities=20% Similarity=0.181 Sum_probs=163.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++.+. .++..+|+|.+...........++. +|+++++.++|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK------SDGKLYVLKEIDLSNMSEKEREDAL--------NEVKILKKLNHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc------CCCcEEEEEEeecccCChHHHHHHH--------HHHHHHHhcCCCChhheEE
Confidence 5889999999999999998863 4678899999876543333333333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc--ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~--~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
.+...+..++|+||+++ +|.+++.... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .++|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--~~~l 144 (258)
T cd08215 67 SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKL 144 (258)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC--cEEE
Confidence 99999999999999997 9999997532 35688899999999999999999999999999999999999988 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++....... .......+++.|+|||.+.+..++...|.|+.|.+ .+..++|+.+
T Consensus 145 ~d~~~~~~~~~~~-----------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~-------~~~l~~g~~p 202 (258)
T cd08215 145 GDFGISKVLSSTV-----------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCV-------LYELCTLKHP 202 (258)
T ss_pred CCccceeecccCc-----------ceecceeeeecccChhHhccCCCCccccHHHHHHH-------HHHHHcCCCC
Confidence 9999998644211 01122347888999999988888899999999977 5666677654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.6e-22 Score=232.58 Aligned_cols=198 Identities=17% Similarity=0.165 Sum_probs=156.2
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l 240 (1566)
++|+..+.||+|+||.||++.+. .++..+|+|.+...... .....+. +|+.++.++. ||||+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~-~~~~~~~--------~e~~~l~~~~~~~~iv~~ 68 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHK------PSGTIMAVKRIRSTVDE-KEQKRLL--------MDLDVVMRSSDCPYIVKF 68 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEEC------CCCCEEEEEEehhccCh-HHHHHHH--------HHHHHHHHhcCCCCEeee
Confidence 46888899999999999988863 56889999998754322 2223333 5888888886 9999999
Q ss_pred cccccccCceeeeccCCccchhhhhc---cCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhh
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQ---FSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~---~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++..++..+++|||++.+|.++.. ......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 69 ~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~--~ 146 (288)
T cd06616 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG--N 146 (288)
T ss_pred eeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC--c
Confidence 99999999999999999876655443 2233568889999999999999999997 5999999999999999988 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc---chhhccccccccccCCchhhhHHHhhccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
+||+|||+++....... .....|+..|+|||++.+. .++...|+|+.|++ .+..++|+
T Consensus 147 ~kl~dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i-------l~el~~g~ 207 (288)
T cd06616 147 IKLCDFGISGQLVDSIA------------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGIT-------LYEVATGK 207 (288)
T ss_pred EEEeecchhHHhccCCc------------cccccCccCccCHHHhccccccCCcchhhhhHHHHH-------HHHHHhCC
Confidence 99999999975432100 0112377889999998765 68889999999987 56667776
Q ss_pred cc
Q 000399 394 RW 395 (1566)
Q Consensus 394 s~ 395 (1566)
.+
T Consensus 208 ~p 209 (288)
T cd06616 208 FP 209 (288)
T ss_pred CC
Confidence 54
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-21 Score=224.30 Aligned_cols=189 Identities=15% Similarity=0.125 Sum_probs=149.8
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|.+ ..+..+|+|.+...... ....++. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~v~~~~~-------~~~~~v~~K~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVL-------KGNTEVAVKTCRSTLPP-DLKRKFL--------QEAEILKQYDHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEE-------eCCCcEEEEeccccCCH-HHHHHHH--------HHHHHHHhCCCCCeEEEEEEEecC
Confidence 4699999999998875 23888999987754322 2233444 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
...++||||+++ +|.+++... ...++...+..++.|++.||.|||+++++||||||+||+++.++ .+||+|||+++
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~--~~~l~d~g~~~ 141 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC--cEEEeeccccc
Confidence 999999999986 999998643 33467888899999999999999999999999999999999988 79999999998
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
.......... ......+..|+|||.+.+..++...|+|+.|++ .+..++
T Consensus 142 ~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i-------~~~l~t 190 (251)
T cd05041 142 EEEGGIYTVS---------DGLKQIPIKWTAPEALNYGRYTSESDVWSYGIL-------LWETFS 190 (251)
T ss_pred cccCCcceec---------cccCcceeccCChHhhccCCCCcchhHHHHHHH-------HHHHHh
Confidence 5431100000 001113456999999988888999999999987 555554
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-21 Score=224.20 Aligned_cols=197 Identities=17% Similarity=0.187 Sum_probs=161.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++.++ .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRL------SDNQFYALKEVDLGSMSQKEREDAV--------NEIRILASVNHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEEC------CCCCEEEEEEEehhhccHHHHHHHH--------HHHHHHHhCCCCCchhhhh
Confidence 4889999999999999998753 4678899999876543333333344 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc--ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~--~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+....|+||||+++ +|.+++.... ...+++..+..++.|++.||.|||+.|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~--~~kl 144 (256)
T cd08530 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND--LVKI 144 (256)
T ss_pred hhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC--cEEE
Confidence 99999999999999987 9999986421 24577888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++..... . .....+++.|++||.+.+..++...|.|+.|++ .+..+.|+.+
T Consensus 145 ~d~g~~~~~~~~-------~------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~-------~~~l~~g~~p 200 (256)
T cd08530 145 GDLGISKVLKKN-------M------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCL-------LYEMATFAPP 200 (256)
T ss_pred eeccchhhhccC-------C------cccccCCccccCHHHHCCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999999865421 0 011236778999999988888889999999987 5566677754
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.1e-20 Score=204.24 Aligned_cols=250 Identities=13% Similarity=0.165 Sum_probs=191.1
Q ss_pred Cceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEe
Q 000399 1284 PWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL 1360 (1566)
Q Consensus 1284 ~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl 1360 (1566)
+.+.+ |+++|.. +++++.|.++++||...+ .+.++..+.-.|..++|......++.+|. ..|.+||.-++
T Consensus 15 ~~i~sl~fs~~G~~-----litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt--k~d~tIryLsl 87 (311)
T KOG1446|consen 15 GKINSLDFSDDGLL-----LITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST--KEDDTIRYLSL 87 (311)
T ss_pred CceeEEEecCCCCE-----EEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC--CCCCceEEEEe
Confidence 44555 8999998 999999999999998866 77888888889999999765555555554 35899999999
Q ss_pred cccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCC----------CCcccc
Q 000399 1361 TRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP----------SSSISK 1428 (1566)
Q Consensus 1361 ~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~----------~~~~~~ 1428 (1566)
.+.++++.+.||...|++|+.+|-+..++|+ |++|++||+++.+|...+.... ..+++..+ +..+++
T Consensus 88 ~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~~~~IkL 166 (311)
T KOG1446|consen 88 HDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANGSELIKL 166 (311)
T ss_pred ecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecCCCeEEE
Confidence 9999999999999999999999999988766 9999999999888876664322 12222222 222333
Q ss_pred cccCCC-----CCCCCc-ccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1429 INTDQV-----GMLNSN-TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1429 ~~~~~~-----~~~~~~-~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
++.+.. ....+. .-......+.|+ |||++++.++..+.+.+.|.-+|..+.++.++.....
T Consensus 167 yD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS----------~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~--- 233 (311)
T KOG1446|consen 167 YDLRSFDKGPFTTFSITDNDEAEWTDLEFS----------PDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGN--- 233 (311)
T ss_pred EEecccCCCCceeEccCCCCccceeeeEEc----------CCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCC---
Confidence 332211 111111 122334445555 5599999999999999999999999999988854310
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec-cCceeeEeeeecc
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA-HDGYVTKVRIISK 1565 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g-H~~~V~~Vafspd 1565 (1566)
......|+|||++|++|+.||+|.+|++++|+.+..+++ |.+++.++.|+|.
T Consensus 234 -----------~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~ 286 (311)
T KOG1446|consen 234 -----------LPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPR 286 (311)
T ss_pred -----------cceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCc
Confidence 012345779999999999999999999999999999999 7999999999984
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-21 Score=231.89 Aligned_cols=202 Identities=16% Similarity=0.137 Sum_probs=153.8
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|.+.+.+|.|+++.|+++. .++..+|+|++............+. +|+.+|+.++||||++++++
T Consensus 4 ~~i~~~~~~~~~v~~~~~~--------~~~~~~avK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i~~~~~~ 67 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHK--------PTNTLVAVKKINLDSCSKEDLKLLQ--------QEIITSRQLQHPNILPYVTS 67 (314)
T ss_pred hhhhHhhcCCceEEEEEec--------CCCCEEEEEEEeccccchhHHHHHH--------HHHHHHHhcCCcchhhhhhe
Confidence 4455556666666666544 3688999999876533333333333 59999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+...+..|++|||+++ +|.+++.......+++..++.+++|++.||.|||+++|+||||||+||+++.++ .+||+||
T Consensus 68 ~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~--~~kl~d~ 145 (314)
T cd08216 68 FIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG--KVVLSGL 145 (314)
T ss_pred eecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC--ceEEecC
Confidence 9999999999999996 999999754344578888999999999999999999999999999999999988 6999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|.+.......... ...........++..|+|||++.. ..|+...|+|+.|++ .+..+.|+.
T Consensus 146 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~i-------l~el~~g~~ 208 (314)
T cd08216 146 RYSVSMIKHGKRQ----RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGIT-------ACELANGHV 208 (314)
T ss_pred ccceeeccccccc----cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHH-------HHHHHhCCC
Confidence 9987543211100 000111122346778999999865 357889999999987 667777764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-21 Score=225.95 Aligned_cols=189 Identities=14% Similarity=0.086 Sum_probs=150.2
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCC-CCcccCCCcccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSV-PGCLRHPNVAPVLGLL 244 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~i-L~~l~HpNIV~l~~~~ 244 (1566)
++.||+|+||.||+|.+. .++..+|+|.+.+...... ....+. .|..+ ....+||||+++++++
T Consensus 1 ~~~l~~g~~~~v~~a~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~e~~~~~~~~~~~~i~~~~~~~ 66 (260)
T cd05611 1 LKPISKGAFGSVYLAKKR------STGDYFAIKVLKKSDMIAKNQVTNVK--------AERAIMMIQGESPYVAKLYYSF 66 (260)
T ss_pred CccCCcCCCeeEEEEEec------CCCCeEEEEEecchhhhHHHHHHHHH--------HHHHHHhhcCCCCCeeeeeeeE
Confidence 367999999999998863 4678899999875432211 111122 23333 3455899999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
...+.+|+||||+++ +|.++++. .+.+++..+..++.|++.||.|||+.+|+||||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg 142 (260)
T cd05611 67 QSKDYLYLVMEYLNGGDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG--HLKLTDFG 142 (260)
T ss_pred EcCCeEEEEEeccCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cEEEeecc
Confidence 999999999999987 99999973 34578899999999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+++.... .....++..|++||.+.+..++...|+|+.|++ .+..+.|+.+
T Consensus 143 ~~~~~~~---------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 192 (260)
T cd05611 143 LSRNGLE---------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCV-------IFEFLFGYPP 192 (260)
T ss_pred cceeccc---------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHH-------HHHHHHCCCC
Confidence 9875331 011236778999999988888889999999987 6667777754
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-21 Score=226.94 Aligned_cols=189 Identities=17% Similarity=0.154 Sum_probs=150.7
Q ss_pred hcccccceee--eecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCc
Q 000399 161 MTALFPIAFI--GICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~I--G~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
.++|++.+.+ |+|+||.||++.++ .++..+|+|.+....... .|+.+...+ +||||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~---------------~e~~~~~~~~~h~~i 71 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHK------PTQKLFVQKIIKAKNFNA---------------IEPMVHQLMKDNPNF 71 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEc------CCCcEEEEEEEehhhcch---------------hhHHHHHHhhcCCCE
Confidence 4567777776 99999999998863 568889999986532211 122111112 69999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++++.|...+..|+||||+++ +|.+++.. ...+++..++.++.|+++||.|||+.|++||||||+||+++.++. .
T Consensus 72 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~ 148 (267)
T PHA03390 72 IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKD-R 148 (267)
T ss_pred EEEEEEEecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCC-e
Confidence 9999999999999999999986 99999974 336889999999999999999999999999999999999998762 5
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++|+|||+++..... ....++..|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 149 ~~l~dfg~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i-------l~~l~~g~~p 205 (267)
T PHA03390 149 IYLCDYGLCKIIGTP---------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVL-------TYELLTGKHP 205 (267)
T ss_pred EEEecCccceecCCC---------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHH-------HHHHHHCCCC
Confidence 999999998754310 01136788999999998889999999999987 6667777643
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-21 Score=222.25 Aligned_cols=197 Identities=18% Similarity=0.202 Sum_probs=161.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|++|.||++.+. .++..+|+|.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNL------ETGDFVAIKQISLEKIKEEALKSIM--------QEIDLLKNLKHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEc------CCCcEEEEEEecccccCHHHHHHHH--------HHHHHHHhCCCCCccEEEE
Confidence 5888999999999999988753 4678899999876543322333333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+..++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~~l~d 142 (254)
T cd06627 67 SIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG--VVKLAD 142 (254)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC--CEEEec
Confidence 99999999999999987 99999874 35678888999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++........ .....++..|+|||.+.+..++...|+|+.|.+ .+..++|+..
T Consensus 143 ~~~~~~~~~~~~~-----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~-------l~~l~~g~~p 198 (254)
T cd06627 143 FGVATKLNDVSKD-----------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCT-------VIELLTGNPP 198 (254)
T ss_pred cccceecCCCccc-----------ccccccchhhcCHhhhcCCCCCcchhHHHHHHH-------HHHHHhCCCC
Confidence 9999865421110 112247888999999887778889999999987 6667777653
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-20 Score=206.67 Aligned_cols=214 Identities=11% Similarity=0.157 Sum_probs=175.2
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEee-------------------eeehhhhhccCcceeeeec
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-------------------SILSSIRAHHGALRSVAVG 1336 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~-------------------~~l~tl~gH~~~V~slafs 1336 (1566)
....|...+++ |||||.+ +||||.|..|+|.|++. ..++++..|.+.|+++.|+
T Consensus 107 ylt~HK~~cR~aafs~DG~l-----vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FH 181 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSL-----VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFH 181 (430)
T ss_pred EEeecccceeeeeeCCCCcE-----EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeec
Confidence 35568888887 9999998 99999999999999861 1578899999999999999
Q ss_pred CcceEEEeeccCCCcccceeeEEeccccccc--ccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecc
Q 000399 1337 QDECTVFTAGIGPGFKGTVQKWELTRINCVS--GYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1412 (1566)
Q Consensus 1337 pd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~--tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h 1412 (1566)
|.+..|+|||. |++||++|.......+ .+-....+|.+|.|+|.|.+++.| -.++++||+.|-+|...-.
T Consensus 182 Pre~ILiS~sr----D~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan-- 255 (430)
T KOG0640|consen 182 PRETILISGSR----DNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN-- 255 (430)
T ss_pred chhheEEeccC----CCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC--
Confidence 99999999998 9999999986543222 222356789999999999999766 4689999999988864322
Q ss_pred cccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeec
Q 000399 1413 SMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWR 1492 (1566)
Q Consensus 1413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~ 1492 (1566)
...+|+..|++|.+++. |++.++||.||.|++||--+++|+.++.
T Consensus 256 -------------------------Pd~qht~ai~~V~Ys~t----------~~lYvTaSkDG~IklwDGVS~rCv~t~~ 300 (430)
T KOG0640|consen 256 -------------------------PDDQHTGAITQVRYSST----------GSLYVTASKDGAIKLWDGVSNRCVRTIG 300 (430)
T ss_pred -------------------------cccccccceeEEEecCC----------ccEEEEeccCCcEEeeccccHHHHHHHH
Confidence 12346788999999887 9999999999999999999999999986
Q ss_pred cCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec
Q 000399 1493 GEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1566)
Q Consensus 1493 ~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g 1552 (1566)
...+ ...|. ..-|+.+|++|.+.+.|..+++|++.+|+++..+.|
T Consensus 301 ~AH~----gsevc-----------Sa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtG 345 (430)
T KOG0640|consen 301 NAHG----GSEVC-----------SAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTG 345 (430)
T ss_pred hhcC----Cceee-----------eEEEccCCeEEeecCCcceeeeeeecCCceEEEEec
Confidence 4411 11222 234567889999999999999999999999999875
|
|
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.4e-22 Score=228.94 Aligned_cols=191 Identities=18% Similarity=0.223 Sum_probs=146.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchh--hccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDC--VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLL 244 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~--~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~ 244 (1566)
+.||+|+||.||+|+++ .++ ..+|+|.+.... .......+. +|+.++.++ +||||+++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~------~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~~~~ 65 (270)
T cd05047 1 DVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEYA-SKDDHRDFA--------GELEVLCKLGHHPNIINLLGAC 65 (270)
T ss_pred CcCCCCCCceEEEEEEc------CCCCeeEEEEEEccccC-CHHHHHHHH--------HHHHHHHhhccCCCeeeEEEEE
Confidence 36899999999998752 233 346778766421 112222333 589999999 799999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
...+..|+||||+++ +|.+++.... ...++...++.++.|++.||+|||++|++||||||+||++
T Consensus 66 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili 145 (270)
T cd05047 66 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 145 (270)
T ss_pred ecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE
Confidence 999999999999986 9999986422 1236778889999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHh
Q 000399 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
+.++ .+||+|||+++..... . .. .....+..|+|||++....++...|+|+.|++ .+..
T Consensus 146 ~~~~--~~kl~dfgl~~~~~~~---~---~~------~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i-------l~el 204 (270)
T cd05047 146 GENY--VAKIADFGLSRGQEVY---V---KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL-------LWEI 204 (270)
T ss_pred cCCC--eEEECCCCCccccchh---h---hc------cCCCCccccCChHHHccCCCCchhhHHHHHHH-------HHHH
Confidence 9988 7999999998632210 0 00 01123456999999988888999999999987 5666
Q ss_pred hc-ccc
Q 000399 390 LA-GRR 394 (1566)
Q Consensus 390 ~a-grs 394 (1566)
++ |+.
T Consensus 205 ~~~g~~ 210 (270)
T cd05047 205 VSLGGT 210 (270)
T ss_pred HcCCCC
Confidence 64 543
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-21 Score=227.17 Aligned_cols=196 Identities=20% Similarity=0.230 Sum_probs=159.4
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++.+.||+|++|.||+|.+. .++..+++|.+............+. +|+.+|+.++||||++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDK------LTGEIVAIKKIKLRFESEGIPKTAL--------REIKLLKELNHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcC------CCCcEEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCcchHHHh
Confidence 678899999999999998863 4688899999876433322222333 58999999999999999999
Q ss_pred ccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
+..++..++||||++++|.+++... ...+++..++.++.|++.||.|||+++|+|+||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l~df~ 143 (283)
T cd05118 67 FRHKGDLYLVFEFMDTDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG--VLKLADFG 143 (283)
T ss_pred hccCCCEEEEEeccCCCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC--cEEEeeee
Confidence 9999999999999999998888743 24678889999999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+........ ......++..|+|||.+.+. .++...|.|+.|++ .+..++|+.
T Consensus 144 ~~~~~~~~~~-----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~-------l~~l~tg~~ 197 (283)
T cd05118 144 LARSFGSPVR-----------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCI-------FAELLSRRP 197 (283)
T ss_pred eeEecCCCcc-----------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHH-------HHHHHhCCC
Confidence 9875542110 01112467789999998766 67889999999987 677777764
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-21 Score=223.71 Aligned_cols=198 Identities=16% Similarity=0.127 Sum_probs=151.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccc---ccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKA---SGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+|.+.+.||+|+||.||++++. ..+..+++|.++.... ......++. +|+.+++.++||||++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 66 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDK------KAVAEERLKVLKEIPVGELNPNETVQAN--------QEAQLLSKLDHPAIVK 66 (260)
T ss_pred CceeeeeecCCCCceEEEEEec------CCCCcceEEEeccccccccCcchHHHHH--------HHHHHHHhCCCCcHHH
Confidence 5889999999999999988753 2234455555443221 111111122 5888999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++++.+....++||||+++ +|.+++.. .....+++..++.++.|++.||.|||++|++|+||||+||+++.+ .
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~---~ 143 (260)
T cd08222 67 FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN---L 143 (260)
T ss_pred HHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC---C
Confidence 99999999999999999997 99988863 223457888999999999999999999999999999999999864 4
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+++....... ......+++.|+|||.+.+..++...|.|+.|++ .+..++|+.+
T Consensus 144 ~~l~d~g~~~~~~~~~~-----------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~-------~~~l~~~~~~ 204 (260)
T cd08222 144 LKIGDFGVSRLLMGSCD-----------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCI-------LYEMCCLAHA 204 (260)
T ss_pred EeecccCceeecCCCcc-----------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99999999876432110 0112236778999999888888889999999987 5666666643
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-21 Score=224.77 Aligned_cols=198 Identities=16% Similarity=0.159 Sum_probs=154.7
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
||+|+||.||++++. .++..+|+|.+.......+ ....+. +|+++++.++||||+++++.+.+..
T Consensus 1 lg~g~~~~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~~~~~~~ 66 (265)
T cd05579 1 ISKGAYGRVFLAKKK------STGDIYAIKVIKKADMIRKNQVDQVL--------TERDILSQAQSPYVVKLYYSFQGKK 66 (265)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEecchhhhhhhHHHHHH--------HHHHHHHhCCCcchhHHHHheecCc
Confidence 689999999998863 4588999999876433221 122222 5899999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
..|+||||+++ +|.+++.. .+.+++..+..++.||+.||.|||++|++||||+|+||+++.++ .+||+|||++..
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~--~~~l~dfg~~~~ 142 (265)
T cd05579 67 NLYLVMEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG--HLKLTDFGLSKV 142 (265)
T ss_pred EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC--CEEEEecccchh
Confidence 99999999986 99999974 23678889999999999999999999999999999999999998 799999999885
Q ss_pred cccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
......... ...........++..|++||.+....++...|+|+.|++ .+..++|+..
T Consensus 143 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~-------~~~l~~g~~p 200 (265)
T cd05579 143 GLVRRQINL---NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCI-------LYEFLVGIPP 200 (265)
T ss_pred cccCccccc---ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHH-------HHHHHhCCCC
Confidence 432111000 000001122347788999999988778889999999987 5666677654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-21 Score=226.25 Aligned_cols=195 Identities=19% Similarity=0.174 Sum_probs=156.1
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 242 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~~ 242 (1566)
|++.+.||+|+||+||+|... .++..+|||.+...... ....... +|+..+++++ ||||+++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~-~~~~~~~--------~e~~~l~~~~~h~~i~~~~~ 65 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNK------ETGELVAIKKMKKKFYS-WEECMNL--------REVKSLRKLNEHPNIVKLKE 65 (283)
T ss_pred CeeheeeccCCceEEEEEEEC------CCCcEEEEEEehhhccc-hhHHHHH--------HHHHHHHhccCCCCchhHHH
Confidence 678899999999999998852 35788999988654221 1111112 5888889998 999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++..++..|+||||++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++ .++|+||
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~--~~~l~d~ 143 (283)
T cd07830 66 VFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE--VVKIADF 143 (283)
T ss_pred HhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--CEEEeec
Confidence 99999999999999988999988754334678889999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+++....... .....++..|+|||++. ...++..+|.|+.|++ .+..++|+.
T Consensus 144 ~~~~~~~~~~~------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~-------l~el~~g~~ 197 (283)
T cd07830 144 GLAREIRSRPP------------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCI-------MAELYTLRP 197 (283)
T ss_pred ccceeccCCCC------------cCCCCCcccccCceeeecCcCcCCccchhhHHHH-------HHHHHhCCC
Confidence 99985432100 11234788899999874 4456789999999987 666766654
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0294 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.8e-20 Score=204.56 Aligned_cols=250 Identities=14% Similarity=0.201 Sum_probs=186.2
Q ss_pred hccccCCCceeccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcce--EEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~--~LaSgS~~~~~D~ 1353 (1566)
.....|.+.+.++.-+|.| +||||.|.+|+|||+... .+..+..|.+.|+++.|.++-. .|+||+. ||
T Consensus 37 F~~~aH~~sitavAVs~~~-----~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sd----DG 107 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVSGPY-----VASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSD----DG 107 (362)
T ss_pred ccccccccceeEEEeccee-----EeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecC----CC
Confidence 4466789999888888998 999999999999999876 7788889999999999998754 8999998 99
Q ss_pred ceeeEEecccccccccccccccccceEEeecCCcee--eccCcEEEeecCCCcEEEEeecccccccccCCCCCcccc---
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK--- 1428 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~La--SgDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~--- 1428 (1566)
.|.+|+..+.+++.++++|.+.|+.|+++|+++... ++|+.+++||+-+|+....+.-........-.+.+..+.
T Consensus 108 ~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~ 187 (362)
T KOG0294|consen 108 HIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSG 187 (362)
T ss_pred cEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEe
Confidence 999999999999999999999999999999999763 459999999999998766554332221111112222111
Q ss_pred ------cccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1429 ------INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1429 ------~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
+..+...+.........+.++.|. ++..+++|+.|+.|++||..++.+...+.+| ..
T Consensus 188 ~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-----------~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH------~~ 250 (362)
T KOG0294|consen 188 RNKIDIYQLDNASVFREIENPKRILCATFL-----------DGSELLVGGDNEWISLKDTDSDTPLTEFLAH------EN 250 (362)
T ss_pred ccEEEEEecccHhHhhhhhccccceeeeec-----------CCceEEEecCCceEEEeccCCCccceeeecc------hh
Confidence 111111111111122334454443 3679999999999999999999999999877 55
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccC-----ceeEEeeccCceeeEeee
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-----NVIASWRAHDGYVTKVRI 1562 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg-----k~l~~l~gH~~~V~~Vaf 1562 (1566)
+|.++.+-. .|++.+|+|+|+||.|++||++.. +.+..+.. ...++|+..
T Consensus 251 RVK~i~~~~---------~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~ 305 (362)
T KOG0294|consen 251 RVKDIASYT---------NPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV 305 (362)
T ss_pred heeeeEEEe---------cCCceEEEEeccCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence 667776431 256679999999999999999876 34544443 445666654
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-21 Score=226.80 Aligned_cols=201 Identities=16% Similarity=0.132 Sum_probs=157.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc--cccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~--~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
+|++.+.||+|+||.||++++. +...++..+|||.+.+...... ....+. +|+.++..+ +||||++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~---~~~~~~~~~avk~~~~~~~~~~~~~~~~~~--------~E~~~l~~~~~~~~i~~ 69 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKV---GGHDAGKLYAMKVLKKATIVQKAKTAEHTR--------TERQVLEAVRRCPFLVT 69 (288)
T ss_pred CceEEEEeccCCCceEEEEEEe---ccccCCcEEEEEEEehHHHHhhhhHHHHHH--------HHHHHHHhccCCcchhh
Confidence 4788999999999999987642 2234678899999875432211 112222 589999999 5999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++.+......|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||+.|++||||||+||+++.++ .++
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~--~~~ 145 (288)
T cd05583 70 LHYAFQTDTKLHLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG--HVV 145 (288)
T ss_pred hheeeecCCEEEEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEE
Confidence 99999999999999999986 99998873 34578888999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc--hhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++........ ......++..|+|||.+.+.. .+...|+|+.|.+ .+..+.|+.+
T Consensus 146 l~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~i-------l~el~tg~~p 207 (288)
T cd05583 146 LTDFGLSKEFLAEEEE----------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVL-------TFELLTGASP 207 (288)
T ss_pred EEECcccccccccccc----------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHH-------HHHHHhCCCC
Confidence 9999998754321000 011223778899999987654 6778999999987 5666677653
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.6e-20 Score=201.22 Aligned_cols=216 Identities=14% Similarity=0.272 Sum_probs=180.4
Q ss_pred ehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEec-ccccccccccccccccceEEeecCCceeec--cCcEE
Q 000399 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT-RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLH 1396 (1566)
Q Consensus 1320 l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~-tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIk 1396 (1566)
+-.+.||++.|+.+.|+|+|..|+|||. |..|.+|++. ..+...+++||.++|..+.|.+++..++|| |.+|+
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~----Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~ 115 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGS----DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVR 115 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCC----cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEE
Confidence 4456799999999999999999999997 9999999963 456677889999999999999999999887 99999
Q ss_pred EeecCCCcEEEEeeccccc------------ccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhc
Q 000399 1397 VWNSQTGKLLSVFAEQSMD------------SLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIEC 1464 (1566)
Q Consensus 1397 LWDl~tg~~l~~l~~h~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pd 1464 (1566)
.||+++|++++.+++|..- .+++++.+....+|+.+.............++++.|...
T Consensus 116 ~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~---------- 185 (338)
T KOG0265|consen 116 GWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDT---------- 185 (338)
T ss_pred EEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccc----------
Confidence 9999999999998887543 345566677778888877777766666778888888876
Q ss_pred cceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeecc-
Q 000399 1465 VERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS- 1543 (1566)
Q Consensus 1465 g~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~s- 1543 (1566)
+..+.+|+-|+.|++||++.+..+++++||.+ .|+.+.. +++|.++.+=+-|+++++||++.
T Consensus 186 s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~D------tIt~lsl-----------s~~gs~llsnsMd~tvrvwd~rp~ 248 (338)
T KOG0265|consen 186 SDQVISGGIDNDIKVWDLRKNDGLYTLSGHAD------TITGLSL-----------SRYGSFLLSNSMDNTVRVWDVRPF 248 (338)
T ss_pred ccceeeccccCceeeeccccCcceEEeecccC------ceeeEEe-----------ccCCCccccccccceEEEEEeccc
Confidence 88999999999999999999999999998844 4444444 56778899999999999999983
Q ss_pred ---CceeEEeeccCce----eeEeeeeccC
Q 000399 1544 ---GNVIASWRAHDGY----VTKVRIISKR 1566 (1566)
Q Consensus 1544 ---gk~l~~l~gH~~~----V~~VafspdG 1566 (1566)
..++..+.||... ...++|+|++
T Consensus 249 ~p~~R~v~if~g~~hnfeknlL~cswsp~~ 278 (338)
T KOG0265|consen 249 APSQRCVKIFQGHIHNFEKNLLKCSWSPNG 278 (338)
T ss_pred CCCCceEEEeecchhhhhhhcceeeccCCC
Confidence 3458888876653 4678899875
|
|
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-21 Score=229.33 Aligned_cols=196 Identities=15% Similarity=0.146 Sum_probs=157.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...|...+.||+|+||.||+|++. .++..+|+|.+....... ....++. +|+++++.++||||++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 79 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQ 79 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEc------CCCcEEEEEEEecccccChHHHHHHH--------HHHHHHHhCCCCCccc
Confidence 346888999999999999998863 467889999886432221 2222333 5999999999999999
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+++++......++||||+.++|.+++... ...+++..++.++.|++.||.|||+++++||||||+||+++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~kl 156 (308)
T cd06634 80 YRGCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156 (308)
T ss_pred EEEEEEcCCeeEEEEEccCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC--cEEE
Confidence 99999999999999999999888877532 34578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++...... ....+++.|+|||.+. ...++..+|+|+.|++ .+..+.|+.+
T Consensus 157 ~dfg~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i-------l~el~~g~~p 213 (308)
T cd06634 157 GDFGSASIMAPA---------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-------CIELAERKPP 213 (308)
T ss_pred CCcccceeecCc---------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHH-------HHHHHcCCCC
Confidence 999998753310 1123778899999874 3456778999999987 5566677753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.8e-21 Score=219.25 Aligned_cols=199 Identities=16% Similarity=0.162 Sum_probs=162.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|.+.+.||+|++|.||+|.+. .++..+++|++............+. +|+.++++++||||+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDK------DTGELMAVKSVELSGDSEEELEALE--------REIRILSSLQHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEEC------CCCcEEEEEEeeccccchHHHHHHH--------HHHHHHHHcCCCCEeeEEE
Confidence 4788899999999999998863 4688999999876543323333333 5999999999999999999
Q ss_pred ccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 243 LLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 243 ~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
.+... ...++||||+++ +|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--~~~l 142 (260)
T cd06606 67 SERDEEKNTLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVKL 142 (260)
T ss_pred EEecCCCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEE
Confidence 99888 899999999976 999999743 3678889999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||.+......... .......++..|++||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 143 ~d~~~~~~~~~~~~~---------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 202 (260)
T cd06606 143 ADFGCAKRLGDIETG---------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCT-------VIEMATGKPP 202 (260)
T ss_pred cccccEEeccccccc---------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999998865531110 00112347788999999988888889999999987 6777777654
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.6e-20 Score=203.18 Aligned_cols=219 Identities=16% Similarity=0.329 Sum_probs=178.2
Q ss_pred cccCCCceeccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceee
Q 000399 1279 LMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQK 1357 (1566)
Q Consensus 1279 ~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrl 1357 (1566)
+..|.+-||.++.+... .+++++|.|.+.+||.++++ |+.++.||.++|++++|++.+.+++|+|. |++-.|
T Consensus 144 ~~GHkDGiW~Vaa~~tq---pi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG----D~taHI 216 (481)
T KOG0300|consen 144 LEGHKDGIWHVAADSTQ---PICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASG----DETAHI 216 (481)
T ss_pred hcccccceeeehhhcCC---cceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccC----CcchHH
Confidence 45699999998776543 25999999999999999987 99999999999999999999999999998 999999
Q ss_pred EEe------cc------------------------------c----ccccccccccccccceEEeecCCceeec--cCcE
Q 000399 1358 WEL------TR------------------------------I----NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1395 (1566)
Q Consensus 1358 WDl------~t------------------------------g----~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtI 1395 (1566)
|.. .+ | -++..++||.+.|.+..|...|+.++++ |.+.
T Consensus 217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTA 296 (481)
T KOG0300|consen 217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTA 296 (481)
T ss_pred HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccc
Confidence 983 10 0 1245578999999999999999998765 9999
Q ss_pred EEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCc
Q 000399 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1566)
Q Consensus 1396 kLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~Dg 1475 (1566)
.+||+++|.++..+.+|.....+ ++-+|. .+++++.|.|.
T Consensus 297 nlwDVEtge~v~~LtGHd~ELtH------------------------------cstHpt----------QrLVvTsSrDt 336 (481)
T KOG0300|consen 297 NLWDVETGEVVNILTGHDSELTH------------------------------CSTHPT----------QRLVVTSSRDT 336 (481)
T ss_pred eeeeeccCceeccccCcchhccc------------------------------cccCCc----------ceEEEEeccCc
Confidence 99999999999999888554222 233443 78999999999
Q ss_pred eEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccC-ceeEEeecc
Q 000399 1476 SLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAH 1553 (1566)
Q Consensus 1476 tIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg-k~l~~l~gH 1553 (1566)
+.|+||++.. ..+..|+|| +..|+++.|.-++ .+++||+|.+|++||+++. ..+++++ -
T Consensus 337 TFRLWDFReaI~sV~VFQGH------tdtVTS~vF~~dd------------~vVSgSDDrTvKvWdLrNMRsplATIR-t 397 (481)
T KOG0300|consen 337 TFRLWDFREAIQSVAVFQGH------TDTVTSVVFNTDD------------RVVSGSDDRTVKVWDLRNMRSPLATIR-T 397 (481)
T ss_pred eeEeccchhhcceeeeeccc------ccceeEEEEecCC------------ceeecCCCceEEEeeeccccCcceeee-c
Confidence 9999999954 567788877 5566777776443 6899999999999999975 4677776 4
Q ss_pred CceeeEeeee
Q 000399 1554 DGYVTKVRII 1563 (1566)
Q Consensus 1554 ~~~V~~Vafs 1563 (1566)
+++++.|+.+
T Consensus 398 dS~~NRvavs 407 (481)
T KOG0300|consen 398 DSPANRVAVS 407 (481)
T ss_pred CCccceeEee
Confidence 6677776665
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.5e-20 Score=203.27 Aligned_cols=239 Identities=13% Similarity=0.170 Sum_probs=188.6
Q ss_pred HHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eeh--hhhhccCcceeeeecCcceEEEe
Q 000399 1270 VERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILS--SIRAHHGALRSVAVGQDECTVFT 1344 (1566)
Q Consensus 1270 ~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~--tl~gH~~~V~slafspd~~~LaS 1344 (1566)
..+|..-++...|.+.|.+ |+|.... |++||.|++|++||+... ..+ ....-...|+++.|+|.|.+++.
T Consensus 159 qa~hPvIRTlYDH~devn~l~FHPre~I-----LiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllv 233 (430)
T KOG0640|consen 159 QARHPVIRTLYDHVDEVNDLDFHPRETI-----LISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLV 233 (430)
T ss_pred ccCCceEeehhhccCcccceeecchhhe-----EEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEE
Confidence 3344455677889999998 9999988 999999999999998743 222 22234679999999999999999
Q ss_pred eccCCCcccceeeEEeccccccccc---ccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccccccc
Q 000399 1345 AGIGPGFKGTVQKWELTRINCVSGY---YGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHG 1419 (1566)
Q Consensus 1345 gS~~~~~D~tVrlWDl~tg~~i~tl---~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~ 1419 (1566)
|.. ..++++||++|-+|...- .+|++.|++|.+++.++..+++ ||.|+|||--+++|+.++...++
T Consensus 234 gTd----Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~----- 304 (430)
T KOG0640|consen 234 GTD----HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG----- 304 (430)
T ss_pred ecC----CCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcC-----
Confidence 987 889999999998886443 6799999999999999988766 99999999999999998865321
Q ss_pred CCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccC
Q 000399 1420 GSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1499 (1566)
Q Consensus 1420 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~ 1499 (1566)
+..|++..|..+ |+++++.+.|.++++|.+.+|+++.++.|.... +
T Consensus 305 -----------------------gsevcSa~Ftkn----------~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~t-g 350 (430)
T KOG0640|consen 305 -----------------------GSEVCSAVFTKN----------GKYILSSGKDSTVKLWEISTGRMLKEYTGAGTT-G 350 (430)
T ss_pred -----------------------CceeeeEEEccC----------CeEEeecCCcceeeeeeecCCceEEEEecCCcc-c
Confidence 356888888887 999999999999999999999999999987432 1
Q ss_pred chhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEee-ccCceeeEeeeeccC
Q 000399 1500 FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1500 ~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~-gH~~~V~~VafspdG 1566 (1566)
....-+...|+....+ .|.---..+.++-||.|++..+..|. ||++.++.+..||.+
T Consensus 351 rq~~rtqAvFNhtEdy----------Vl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~ 408 (430)
T KOG0640|consen 351 RQKHRTQAVFNHTEDY----------VLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVE 408 (430)
T ss_pred chhhhhhhhhcCccce----------EEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCC
Confidence 1222233334433322 22222345779999999999888875 899999999999864
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-19 Score=196.51 Aligned_cols=211 Identities=20% Similarity=0.243 Sum_probs=170.1
Q ss_pred hhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEee
Q 000399 1322 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWN 1399 (1566)
Q Consensus 1322 tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWD 1399 (1566)
.++||+.+++.+.++.+|.+|+|+++ |.++.||-..+|+.+.+|.||++.|+|++...+.+.+++| |.+++|||
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaK----D~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAK----DSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecC----CCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEE
Confidence 46799999999999999999999999 9999999999999999999999999999999999999877 99999999
Q ss_pred cCCCcEEEEeecccccccccCCCCCcccccccCC-----------------------CCCCCCcccccccccccccchhH
Q 000399 1400 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ-----------------------VGMLNSNTLSSGILSTAFDGNLY 1456 (1566)
Q Consensus 1400 l~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~V~svafsp~~~ 1456 (1566)
+.+|+++.++........+..+.+++..++..+. .....+..+.+.+.++.|+|.
T Consensus 81 v~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l-- 158 (327)
T KOG0643|consen 81 VETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL-- 158 (327)
T ss_pred cCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc--
Confidence 9999999988765444333333444333332111 112233344566666667665
Q ss_pred HHhhhhhccceEEEEecCceEEEEEccCCceeee-eccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCc
Q 000399 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-WRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQ 1535 (1566)
Q Consensus 1457 t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~-~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~ 1535 (1566)
++++++|..||.|..||+++|+.+.. -+. |+..|+.++++ +|..++++||.|.+
T Consensus 159 --------~~~ii~Ghe~G~is~~da~~g~~~v~s~~~------h~~~Ind~q~s-----------~d~T~FiT~s~Dtt 213 (327)
T KOG0643|consen 159 --------GETIIAGHEDGSISIYDARTGKELVDSDEE------HSSKINDLQFS-----------RDRTYFITGSKDTT 213 (327)
T ss_pred --------CCEEEEecCCCcEEEEEcccCceeeechhh------hcccccccccc-----------CCcceEEecccCcc
Confidence 99999999999999999999865533 333 45567777765 55578999999999
Q ss_pred eeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1536 CRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1536 I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
.++||+++-++++++. .+.+|++.+++|
T Consensus 214 akl~D~~tl~v~Kty~-te~PvN~aaisP 241 (327)
T KOG0643|consen 214 AKLVDVRTLEVLKTYT-TERPVNTAAISP 241 (327)
T ss_pred ceeeeccceeeEEEee-ecccccceeccc
Confidence 9999999999999998 589999999998
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-21 Score=224.71 Aligned_cols=194 Identities=16% Similarity=0.192 Sum_probs=157.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|...+.||+|++|.||++.+. .++..+++|.+..... .....+. +|+.+++.++||||+++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~~--~~~~~~~--------~e~~~l~~~~h~~vv~~~~ 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDK------STGRQVAVKKMDLRKQ--QRRELLF--------NEVVIMRDYQHPNIVEMYS 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEEC------CCCCEEEEEEEeccch--hHHHHHH--------HHHHHHHHcCCCChheEEE
Confidence 4666789999999999988752 4678899998754321 1122233 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++...+..++|+||+++ +|.+++.. ..++...+..++.|++.||.|||++||+||||||+||+++.++ .++|+|
T Consensus 84 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~d 158 (285)
T cd06648 84 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG--RVKLSD 158 (285)
T ss_pred EEEcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC--cEEEcc
Confidence 99999999999999987 99999873 4478888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++..... ... .....|++.|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 159 ~g~~~~~~~~-------~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~-------l~ell~g~~p 214 (285)
T cd06648 159 FGFCAQVSKE-------VPR----RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIM-------VIEMVDGEPP 214 (285)
T ss_pred cccchhhccC-------Ccc----cccccCCccccCHHHhcCCCCCCcccHHHHHHH-------HHHHHhCCCC
Confidence 9988754321 000 012247889999999988888899999999987 6677777653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-21 Score=220.21 Aligned_cols=185 Identities=17% Similarity=0.147 Sum_probs=144.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCc--ccCCCc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC--LRHPNV 237 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~--l~HpNI 237 (1566)
+..+.++++.||+|.||+||+|+ ..|..||||++... +...+. ||.+|.+. |+|+||
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~--------wrGe~VAVKiF~sr-----dE~SWf--------rEtEIYqTvmLRHENI 267 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGR--------WRGEDVAVKIFSSR-----DERSWF--------RETEIYQTVMLRHENI 267 (513)
T ss_pred hhheeEEEEEecCccccceeecc--------ccCCceEEEEeccc-----chhhhh--------hHHHHHHHHHhccchh
Confidence 34478899999999999999988 46899999997642 233344 57777655 499999
Q ss_pred ccccccccccC----ceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh--------ccccCCCccC
Q 000399 238 APVLGLLKTSG----LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--------LGIAHRSVCP 304 (1566)
Q Consensus 238 V~l~~~~~~~~----~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~--------~gIiHrDLKp 304 (1566)
+.++++-..+. .+|||.+|-+ |+|+|+|.. ..++......++..++.||.|||. -.|.|||||.
T Consensus 268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred hhhhhccccCCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 99999876553 8999999999 599999983 557888889999999999999996 3599999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccc-cccCCCCCCceeeeecCCcccccccccccccccc----hhh--ccccccccc
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIA-DWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHS--QFNRWWRGE 377 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~-~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----y~~--~~d~Ws~G~ 377 (1566)
.|||+..++ ..-|+|+|||-..... ........+ -+||-.|||||++...- +++ ..|+|+.|-
T Consensus 345 KNILVKkn~--~C~IADLGLAv~h~~~t~~idi~~N~--------rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgL 414 (513)
T KOG2052|consen 345 KNILVKKNG--TCCIADLGLAVRHDSDTDTIDIPPNP--------RVGTKRYMAPEVLDETINMKHFESYKRADIYAFGL 414 (513)
T ss_pred ccEEEccCC--cEEEeeceeeEEecccCCcccCCCCC--------ccceeeccChHHhhhhcChhhhhhhhHHHHHHHHH
Confidence 999999999 7999999999754322 122222233 35999999999996432 222 567888885
Q ss_pred c
Q 000399 378 L 378 (1566)
Q Consensus 378 i 378 (1566)
+
T Consensus 415 V 415 (513)
T KOG2052|consen 415 V 415 (513)
T ss_pred H
Confidence 4
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-19 Score=225.35 Aligned_cols=206 Identities=19% Similarity=0.207 Sum_probs=154.9
Q ss_pred cccccCccCCCCceEeee----------ee----hhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEeccc--
Q 000399 1301 LGRVGGLKDESPWKIKAS----------IL----SSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRI-- 1363 (1566)
Q Consensus 1301 LaSgS~D~~I~vWdl~~~----------~l----~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg-- 1363 (1566)
+++++.+..+..|+..++ .+ ..+.||.+.|++++|+| |+.+|+|||. |++|++||+.++
T Consensus 35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~----DgtIkIWdi~~~~~ 110 (493)
T PTZ00421 35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE----DGTIMGWGIPEEGL 110 (493)
T ss_pred cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC----CCEEEEEecCCCcc
Confidence 667666666677765433 11 13679999999999999 8899999998 999999999765
Q ss_pred -----ccccccccccccccceEEeecC-Cceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCC
Q 000399 1364 -----NCVSGYYGHEEVVNDICVLSSS-GRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1435 (1566)
Q Consensus 1364 -----~~i~tl~gH~~~V~sVafsp~g-~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 1435 (1566)
+++.++.+|...|.+|+|+|++ ..++|+ |++|+|||+++++.+..+.+|
T Consensus 111 ~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h----------------------- 167 (493)
T PTZ00421 111 TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCH----------------------- 167 (493)
T ss_pred ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCC-----------------------
Confidence 3567789999999999999986 467765 999999999999888777654
Q ss_pred CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcc
Q 000399 1436 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1566)
Q Consensus 1436 ~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~ 1515 (1566)
...|.+++|+|+ |+.+++|+.|++|++||+++++.+.++.+|.... +..+.+.
T Consensus 168 -------~~~V~sla~spd----------G~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~-----~~~~~w~----- 220 (493)
T PTZ00421 168 -------SDQITSLEWNLD----------GSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAK-----SQRCLWA----- 220 (493)
T ss_pred -------CCceEEEEEECC----------CCEEEEecCCCEEEEEECCCCcEEEEEecCCCCc-----ceEEEEc-----
Confidence 456888999886 8999999999999999999999999888774321 1122333
Q ss_pred cCCCcccchhHHHhc----cCCCceeEEeeccCc-eeEEeeccC-ceeeEeeeeccC
Q 000399 1516 QAGGAVASPSWIAAG----LSSGQCRLFDVRSGN-VIASWRAHD-GYVTKVRIISKR 1566 (1566)
Q Consensus 1516 ~~~~~spdg~~LaSG----s~Dg~I~lWD~~sgk-~l~~l~gH~-~~V~~VafspdG 1566 (1566)
+++..|+++ +.|+.|++||+++.. .+.....+. ..+....|++++
T Consensus 221 ------~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~ 271 (493)
T PTZ00421 221 ------KRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDT 271 (493)
T ss_pred ------CCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCC
Confidence 333345443 458999999999764 444444333 345555676664
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.9e-21 Score=225.32 Aligned_cols=198 Identities=17% Similarity=0.180 Sum_probs=155.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.++ .++..+|||.+.+.... ....+++ +|+.++.+. .||||++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~i~~ 78 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFK------KTGHVMAVKQMRRTGNK-EENKRIL--------MDLDVVLKSHDCPYIVK 78 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEEC------CCCeEEEEEEEeccCCh-HHHHHHH--------HHHHHHHhccCCCchHh
Confidence 568999999999999999998863 35888999998754322 1222333 366555555 5999999
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++.+...+|+||||++++|.+++... ...+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .+|
T Consensus 79 ~~~~~~~~~~~~~v~e~~~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~--~~k 155 (296)
T cd06618 79 CYGYFITDSDVFICMELMSTCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG--NVK 155 (296)
T ss_pred hheeeecCCeEEEEeeccCcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC--CEE
Confidence 99999999999999999998888777642 3367888888999999999999997 6999999999999999888 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc----hhhccccccccccCCchhhhHHHhhcccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+|||+++....... .....++..|+|||.+.+.. ++...|+|+.|++ .+..++|+.
T Consensus 156 L~dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~i-------l~el~~g~~ 216 (296)
T cd06618 156 LCDFGISGRLVDSKA------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGIS-------LVELATGQF 216 (296)
T ss_pred ECccccchhccCCCc------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHH-------HHHHHhCCC
Confidence 999999875432100 01113677899999987553 7778999999987 677777876
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 217 p 217 (296)
T cd06618 217 P 217 (296)
T ss_pred C
Confidence 5
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.4e-21 Score=232.99 Aligned_cols=207 Identities=18% Similarity=0.173 Sum_probs=167.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
..+..++||.|+||+||+|.. +.+ ...-+.+||||++... ...+...+++ +|+-+|.+++|||+++|++
T Consensus 697 elkk~kvLGsgAfGtV~kGiw-~Pe-ge~vKipVaiKvl~~~-t~~~~s~e~L--------deAl~masldHpnl~RLLg 765 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIW-IPE-GENVKIPVAIKVLIEF-TSPKASIELL--------DEALRMASLDHPNLLRLLG 765 (1177)
T ss_pred hhhhhceeccccceeEEeeeE-ecC-CceecceeEEEEeecc-CCchhhHHHH--------HHHHHHhcCCCchHHHHhh
Confidence 566789999999999999874 222 2344678999998764 4445566677 4999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++..+. +.||++|+++ +|.++++.. +..+-......|.+||++||.|||+++++||||..+|+|+.... ++||+|
T Consensus 766 vc~~s~-~qlvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~--hvkitd 841 (1177)
T KOG1025|consen 766 VCMLST-LQLVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN--HVKITD 841 (1177)
T ss_pred hcccch-HHHHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCC--eEEEEe
Confidence 998876 8899999995 999999964 44577888899999999999999999999999999999999988 899999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDY 398 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl 398 (1566)
||+|+......+.-....- ...+-|||-|.+....|+.+.|+|+.|+- ++.+-+|..+++..+
T Consensus 842 fgla~ll~~d~~ey~~~~g---------K~pikwmale~i~~~~~thqSDVWsfGVt-----iWElmTFGa~Py~gi 904 (1177)
T KOG1025|consen 842 FGLAKLLAPDEKEYSAPGG---------KVPIKWMALESIRIRKYTHQSDVWSFGVT-----IWELMTFGAKPYDGI 904 (1177)
T ss_pred cchhhccCccccccccccc---------ccCcHHHHHHHhhccCCCchhhhhhhhhh-----HHHHHhcCCCccCCC
Confidence 9999976643221111111 13455899999999999999999999986 778888888876543
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.3e-21 Score=224.36 Aligned_cols=197 Identities=13% Similarity=0.150 Sum_probs=161.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|+..+.||+|+||.||+|.+. .++..+++|.+..... ....+. +|+++++.++||||+++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 80 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDR------ATGKEVAIKKMRLRKQ---NKELII--------NEILIMKDCKHPNIVDY 80 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEc------cCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHCCCCCeeEE
Confidence 457999999999999999988863 3578899999875432 223333 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+..|+|+||+++ +|.+++.... ..++...+..++.|++.||.|||+.||+|+||||+||+++.++ .++|
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~--~~~l 157 (286)
T cd06614 81 YDSYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG--SVKL 157 (286)
T ss_pred EEEEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC--CEEE
Confidence 9999999999999999996 9999998432 2678888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........ . .....++..|++||++.+..++...|.|+.|++ .+..+.|+.+
T Consensus 158 ~d~~~~~~~~~~~~------~-----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvi-------l~~l~~g~~p 215 (286)
T cd06614 158 ADFGFAAQLTKEKS------K-----RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIM-------CIEMAEGEPP 215 (286)
T ss_pred Cccchhhhhccchh------h-----hccccCCcccCCHhHhcCCCCCCccccHHHHHH-------HHHHHhCCCC
Confidence 99999864332100 0 011236778999999988888999999999988 6666777653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.8e-20 Score=230.80 Aligned_cols=197 Identities=17% Similarity=0.321 Sum_probs=172.3
Q ss_pred cccccCccCCCCceEeee-eehh-hhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccc
Q 000399 1301 LGRVGGLKDESPWKIKAS-ILSS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1566)
Q Consensus 1301 LaSgS~D~~I~vWdl~~~-~l~t-l~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~s 1378 (1566)
+.+++.|+++++||..++ .+.+ +.||.+.|.++++..-+.++++||. |+|++|||..+|+|..++.||.+.|.+
T Consensus 221 ~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~----D~t~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 221 FKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGST----DKTERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred EEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEec----CCcEEeEecCCCcEEEEecCCCceEEE
Confidence 899999999999998876 5555 9999999999999888889999998 999999999999999999999999998
Q ss_pred eEEeecCCceee--ccCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhH
Q 000399 1379 ICVLSSSGRIAS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1566)
Q Consensus 1379 Vafsp~g~~LaS--gDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~ 1456 (1566)
+.. ....++| .|.+|++||+.+++++.++.+| ...|+++..+
T Consensus 297 ~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h------------------------------~~~V~~v~~~---- 340 (537)
T KOG0274|consen 297 LTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGH------------------------------TGPVNCVQLD---- 340 (537)
T ss_pred EEc--cCceEeeccCCceEEEEeccCcceEEEeccc------------------------------cccEEEEEec----
Confidence 864 3445566 4999999999999999988775 4567777776
Q ss_pred HHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCce
Q 000399 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1566)
Q Consensus 1457 t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I 1536 (1566)
+.++++|+.|++|++||+.++++++++.+| +++|.++.+.+. ..+++|+.|+.|
T Consensus 341 --------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH------~~~V~sl~~~~~------------~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 341 --------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH------TGRVYSLIVDSE------------NRLLSGSLDTTI 394 (537)
T ss_pred --------CCEEEEEecCceEEEEEhhhceeeeeecCC------cceEEEEEecCc------------ceEEeeeeccce
Confidence 459999999999999999999999999987 567777766432 478999999999
Q ss_pred eEEeeccC-ceeEEeeccCceeeEeeee
Q 000399 1537 RLFDVRSG-NVIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1537 ~lWD~~sg-k~l~~l~gH~~~V~~Vafs 1563 (1566)
++||++++ +++.++++|..-|.++.+.
T Consensus 395 kvWdl~~~~~c~~tl~~h~~~v~~l~~~ 422 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTSLVSSLLLR 422 (537)
T ss_pred EeecCCchhhhhhhhcCCcccccccccc
Confidence 99999999 9999999999988777653
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-21 Score=216.80 Aligned_cols=195 Identities=16% Similarity=0.191 Sum_probs=160.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|+..+.||+|++|.||++.+. .++..+++|++..... ....++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 64 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHK------RTGKEVAIKVIKLESK--EKKEKII--------NEIQILKKCKHPNIVKYYG 64 (253)
T ss_pred CceeeeeeccCCceEEEEEEEC------CCCcEEEEEEecccch--hHHHHHH--------HHHHHHHhCCCCCEeEEEE
Confidence 4788999999999999998853 3678899999876432 1222333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+..+...++++||+++ +|.+++...+ ..+++..+..++.|++.||.+||++|++||||+|+||+++.++ .++|+|
T Consensus 65 ~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d 141 (253)
T cd05122 65 SYLKKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG--EVKLID 141 (253)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC--eEEEee
Confidence 99999999999999996 9999987432 4578889999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||.+........ .....++..|++||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 142 ~~~~~~~~~~~~------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 196 (253)
T cd05122 142 FGLSAQLSDTKA------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGIT-------AIELAEGKPP 196 (253)
T ss_pred cccccccccccc------------ccceecCCcccCHHHHcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 999886542110 112347788999999988788889999999987 6667777754
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.4e-21 Score=217.74 Aligned_cols=177 Identities=15% Similarity=0.097 Sum_probs=143.6
Q ss_pred cchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccCceee
Q 000399 173 CSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITS 252 (1566)
Q Consensus 173 G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~~l~L 252 (1566)
|.||.||+++++ .++..+|+|.+.+..... +|...+....||||+++++++...+..|+
T Consensus 4 g~~~~v~~~~~~------~~~~~~~~K~i~~~~~~~---------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l 62 (237)
T cd05576 4 GVIDKVLLVMDT------RTQQTFILKGLRKSSEYS---------------RERLTIIPHCVPNMVCLHKYIVSEDSVFL 62 (237)
T ss_pred cccceEEEEEEc------cCCcEEEEEeecchhhhh---------------hHHHHHHhcCCCceeehhhheecCCeEEE
Confidence 899999998874 578899999987642111 23333444569999999999999999999
Q ss_pred eccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCccccc
Q 000399 253 VIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIA 331 (1566)
Q Consensus 253 V~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~ 331 (1566)
||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .++++|||.+......
T Consensus 63 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~df~~~~~~~~~ 138 (237)
T cd05576 63 VLQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG--HIQLTYFSRWSEVEDS 138 (237)
T ss_pred EEecCCCCCHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC--CEEEecccchhccccc
Confidence 9999997 99999873 34578889999999999999999999999999999999999998 7999999987643310
Q ss_pred cccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 332 DWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..+..++..|+|||.+.+..++...|.|+.|++ .+..++|+..
T Consensus 139 --------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i-------l~el~~g~~~ 181 (237)
T cd05576 139 --------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAI-------LFELLTGKTL 181 (237)
T ss_pred --------------cccCCcCccccCCcccCCCCCCchhhHHHHHHH-------HHHHHHCcch
Confidence 011125667999999988888889999999987 6677778753
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-19 Score=227.49 Aligned_cols=229 Identities=15% Similarity=0.154 Sum_probs=180.3
Q ss_pred cCCCCCCCCCccccccc--CccCCCCceEeee-------------eehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1289 PTPAASWDGPDFLGRVG--GLKDESPWKIKAS-------------ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS--~D~~I~vWdl~~~-------------~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
.||||.. +|||| .|+.++||+.+.- .+.+...|.+.|+|+.|+|||.+||+||. |+
T Consensus 21 v~pdg~~-----~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD----D~ 91 (942)
T KOG0973|consen 21 VHPDGVK-----FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD----DR 91 (942)
T ss_pred ecCCcee-----EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC----cc
Confidence 7999998 99999 9999999997531 34566789999999999999999999998 99
Q ss_pred ceeeEEecc------------------cccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccc
Q 000399 1354 TVQKWELTR------------------INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQS 1413 (1566)
Q Consensus 1354 tVrlWDl~t------------------g~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~ 1413 (1566)
.|.||+... .+++.++.+|...|.+++|+|++.++||+ |++|.|||.++.+.+.++.+|
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H- 170 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGH- 170 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecc-
Confidence 999999762 24677889999999999999999999998 999999999999999998886
Q ss_pred ccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeecc
Q 000399 1414 MDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1493 (1566)
Q Consensus 1414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~ 1493 (1566)
.+.|..+.|+|- |+++++-+.|++|++|++.+....+.+.+
T Consensus 171 -----------------------------~s~VKGvs~DP~----------Gky~ASqsdDrtikvwrt~dw~i~k~It~ 211 (942)
T KOG0973|consen 171 -----------------------------QSLVKGVSWDPI----------GKYFASQSDDRTLKVWRTSDWGIEKSITK 211 (942)
T ss_pred -----------------------------cccccceEECCc----------cCeeeeecCCceEEEEEcccceeeEeecc
Confidence 455778899988 99999999999999999876555444444
Q ss_pred CCc----------------------------------------------ccCchhhHHHhhccCCCc--ccCCCcccchh
Q 000399 1494 EPT----------------------------------------------ELGFPSLVSAICACGSEK--MQAGGAVASPS 1525 (1566)
Q Consensus 1494 h~~----------------------------------------------~v~~~~~V~sv~~s~~~~--~~~~~~spdg~ 1525 (1566)
+-. .++|..++.++.|+|.-- -...|.+..+.
T Consensus 212 pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~ 291 (942)
T KOG0973|consen 212 PFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPN 291 (942)
T ss_pred chhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCC
Confidence 332 334444444444443210 00011222222
Q ss_pred ----HHHhccCCCceeEEeeccCceeEEee-ccCceeeEeeeeccC
Q 000399 1526 ----WIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1526 ----~LaSGs~Dg~I~lWD~~sgk~l~~l~-gH~~~V~~VafspdG 1566 (1566)
.+|+||.|+.|.||.+..-+++.... --+..|..++|+|||
T Consensus 292 ~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG 337 (942)
T KOG0973|consen 292 CYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDG 337 (942)
T ss_pred cceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCC
Confidence 68999999999999998888776653 245789999999998
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-19 Score=226.41 Aligned_cols=193 Identities=11% Similarity=0.086 Sum_probs=152.6
Q ss_pred ccccCccCCCCceEeee-eehhhhhccCcceeeeecCc-ceEEEeeccCCCcccceeeEEecccc--------ccccccc
Q 000399 1302 GRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTRIN--------CVSGYYG 1371 (1566)
Q Consensus 1302 aSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd-~~~LaSgS~~~~~D~tVrlWDl~tg~--------~i~tl~g 1371 (1566)
..||.++.+++|+.... .+..+.+|.+.|.+++|+|+ +.+|+|||. |++|+|||+.++. ++.++.+
T Consensus 48 ~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~----DgtIrIWDi~t~~~~~~~i~~p~~~L~g 123 (568)
T PTZ00420 48 EGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSE----DLTIRVWEIPHNDESVKEIKDPQCILKG 123 (568)
T ss_pred CCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeC----CCeEEEEECCCCCccccccccceEEeec
Confidence 45777889999987654 67788999999999999996 789999998 9999999997642 3446789
Q ss_pred ccccccceEEeecCCce-eec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCccccccccc
Q 000399 1372 HEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILS 1448 (1566)
Q Consensus 1372 H~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~s 1448 (1566)
|...|.+|+|+|++..+ +|+ |++|+|||+++++.+..+.. ...|.+
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------------------------------~~~V~S 172 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------------------------------PKKLSS 172 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-------------------------------CCcEEE
Confidence 99999999999998865 554 99999999999987765531 234778
Q ss_pred ccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHH
Q 000399 1449 TAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIA 1528 (1566)
Q Consensus 1449 vafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~La 1528 (1566)
++|+|+ |.+|++++.|++|++||+++++.+.++.+|.+.+ .+.++ ...++++++.+|+
T Consensus 173 lswspd----------G~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~------~s~~v------~~~~fs~d~~~Il 230 (568)
T PTZ00420 173 LKWNIK----------GNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGK------NTKNI------WIDGLGGDDNYIL 230 (568)
T ss_pred EEECCC----------CCEEEEEecCCEEEEEECCCCcEEEEEecccCCc------eeEEE------EeeeEcCCCCEEE
Confidence 888876 8999999999999999999999999998885421 11111 1224457777888
Q ss_pred hccCCC----ceeEEeecc-CceeEEee
Q 000399 1529 AGLSSG----QCRLFDVRS-GNVIASWR 1551 (1566)
Q Consensus 1529 SGs~Dg----~I~lWD~~s-gk~l~~l~ 1551 (1566)
|++.|+ .|+|||+++ ++++..+.
T Consensus 231 TtG~d~~~~R~VkLWDlr~~~~pl~~~~ 258 (568)
T PTZ00420 231 STGFSKNNMREMKLWDLKNTTSALVTMS 258 (568)
T ss_pred EEEcCCCCccEEEEEECCCCCCceEEEE
Confidence 877664 799999995 66776654
|
|
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-21 Score=225.07 Aligned_cols=194 Identities=17% Similarity=0.175 Sum_probs=155.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|+....||+|+||.||++..+ .++..+|+|.+.... ......+. +|+.+++.++||||+++++
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~~ 84 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVK------SSGKLVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHENVVEMYN 84 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEc------CCCeEEEEEEecccc--hhHHHHHH--------HHHHHHHhcCCcchhheee
Confidence 4555678999999999987753 578899999875422 12222333 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+..|+||||+++ +|.+++.. ..+++..++.++.|++.||.|||++|++||||||+||+++.++ .++|+|
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~--~~~l~d 159 (292)
T cd06657 85 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG--RVKLSD 159 (292)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999997 89888752 3467888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||++....... .. .....+++.|++||.+.+..++...|.|+.|++ .+..++|..+
T Consensus 160 fg~~~~~~~~~----~~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvi-------l~el~tg~~p 215 (292)
T cd06657 160 FGFCAQVSKEV----PR-------RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIM-------VIEMVDGEPP 215 (292)
T ss_pred cccceeccccc----cc-------ccccccCccccCHHHhcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99987543110 00 012247888999999988788889999999987 5666667553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-19 Score=210.02 Aligned_cols=216 Identities=15% Similarity=0.229 Sum_probs=176.5
Q ss_pred CCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeE
Q 000399 1283 EPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1283 ~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlW 1358 (1566)
.+-|++ |-.||.+ ++.|+..|.|+|||.++. .++.+.+|+.+|..+.|+| |++.+++||. |+.+++|
T Consensus 68 k~~v~s~~fR~DG~L-----laaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sD----d~v~k~~ 138 (487)
T KOG0310|consen 68 KDVVYSVDFRSDGRL-----LAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSD----DKVVKYW 138 (487)
T ss_pred ccceeEEEeecCCeE-----EEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCC----CceEEEE
Confidence 344544 8899998 999999999999997765 7889999999999999999 5667777876 9999999
Q ss_pred EecccccccccccccccccceEEeecCCce-eec--cCcEEEeecCCC-cEEEEeecccccccccCCCCCcccccccCCC
Q 000399 1359 ELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1434 (1566)
Q Consensus 1359 Dl~tg~~i~tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg-~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~ 1434 (1566)
|+.+...+..+.+|++.|.|.+|+|....+ +|| ||+||+||.++. ..+.++.
T Consensus 139 d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln------------------------ 194 (487)
T KOG0310|consen 139 DLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN------------------------ 194 (487)
T ss_pred EcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec------------------------
Confidence 999988766889999999999999998855 777 999999999976 4554443
Q ss_pred CCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCc
Q 000399 1435 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1514 (1566)
Q Consensus 1435 ~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~ 1514 (1566)
|+.+|.++.|-|. |..+++++. ..|++||+-+|..+..-.. .|.-.|+|+++..+
T Consensus 195 -------hg~pVe~vl~lps----------gs~iasAgG-n~vkVWDl~~G~qll~~~~-----~H~KtVTcL~l~s~-- 249 (487)
T KOG0310|consen 195 -------HGCPVESVLALPS----------GSLIASAGG-NSVKVWDLTTGGQLLTSMF-----NHNKTVTCLRLASD-- 249 (487)
T ss_pred -------CCCceeeEEEcCC----------CCEEEEcCC-CeEEEEEecCCceehhhhh-----cccceEEEEEeecC--
Confidence 3556777777665 788888876 6799999997655433322 14556788888643
Q ss_pred ccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1515 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1515 ~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
+..|+|||-|+.|++||+.+-+.+..|. -.++|.+++.+||+
T Consensus 250 ---------~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd 291 (487)
T KOG0310|consen 250 ---------STRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDD 291 (487)
T ss_pred ---------CceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCC
Confidence 3689999999999999999999999998 57999999999964
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-19 Score=196.88 Aligned_cols=230 Identities=13% Similarity=0.192 Sum_probs=174.7
Q ss_pred cCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1281 ~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
.|+-.|++ +||.|++ |++||.|.++.||.-..+ ++.++.||.+.|.|++|+++|.+|||+|. |+.|
T Consensus 59 ~hkrsVRsvAwsp~g~~-----La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSR----DKSV 129 (312)
T KOG0645|consen 59 GHKRSVRSVAWSPHGRY-----LASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSR----DKSV 129 (312)
T ss_pred cchheeeeeeecCCCcE-----EEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeC----CCeE
Confidence 47777887 7999999 999999999999986654 88999999999999999999999999998 9999
Q ss_pred eeEEeccc---ccccccccccccccceEEeecCCceeec--cCcEEEeecC---CCcEEEEeecccccccccCCCCCccc
Q 000399 1356 QKWELTRI---NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ---TGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1356 rlWDl~tg---~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~---tg~~l~~l~~h~~~~~~~~~~~~~~~ 1427 (1566)
-||.+..+ +|+..+++|+..|..+.|+|....|+|| |.+||+|+-. .-.+++++.+|...+-...+.+....
T Consensus 130 WiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~r 209 (312)
T KOG0645|consen 130 WIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSR 209 (312)
T ss_pred EEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCce
Confidence 99999744 7889999999999999999999999988 9999999877 23688999988754333332222222
Q ss_pred ccccCCCCCCCC--------cccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCc--eeeeeccCCcc
Q 000399 1428 KINTDQVGMLNS--------NTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ--KLHLWRGEPTE 1497 (1566)
Q Consensus 1428 ~~~~~~~~~~~~--------~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~--~l~~~~~h~~~ 1497 (1566)
+........+.+ ..|+..+..++|. + ..+++|+.|+.|+++--..+- ....+-.+ ..
T Consensus 210 l~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~-~-----------~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~-~~ 276 (312)
T KOG0645|consen 210 LVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWD-N-----------GVIASGGGDDAIRLFKESDSPDEPSWNLLAK-KE 276 (312)
T ss_pred EEEecCCcceEeeeeccCcchhcccceEeeeec-c-----------cceEeccCCCEEEEEEecCCCCCchHHHHHh-hh
Confidence 222222222222 2366778888887 3 389999999999999766431 11111111 01
Q ss_pred cCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeec
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1498 v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
..|..-|++|+++|.. ...|++|++||.|++|.+.
T Consensus 277 ~aHe~dVNsV~w~p~~----------~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 277 GAHEVDVNSVQWNPKV----------SNRLASGGDDGIVNFWELE 311 (312)
T ss_pred cccccccceEEEcCCC----------CCceeecCCCceEEEEEec
Confidence 1356678889988732 2489999999999999864
|
|
| >KOG1786 consensus Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.2e-20 Score=247.48 Aligned_cols=185 Identities=32% Similarity=0.501 Sum_probs=148.2
Q ss_pred hhccccccccccCCchhhhHHHhhcccccCCccceeecceeE-eeccC-CCCCCCcccccccccccccccCCcceeeee-
Q 000399 367 HSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQLDFTY- 443 (1566)
Q Consensus 367 ~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~~~~~~- 443 (1566)
...+..|..|.++||+|++.+|.++||+++|+.|||||||++ ||..+ .++.+..+||++++|+++. .+.+...+
T Consensus 873 ~a~~~~~~~~~~~n~~y~~~~~~~agrs~nd~~q~~v~~~~~ad~~~k~~~l~~~~~~~~~~r~~a~~---~~~~~~~~~ 949 (1081)
T KOG1786|consen 873 LAITNTWEEGLISNFEYLTMLNLLAGRSFNDWMQYPVFPWVLADYVSKVLDLQDLLIYRDLSRPIAVQ---KEKLEEHHS 949 (1081)
T ss_pred hhhhhhhccccccchHHHHHHHHhhcCcHHHhhcCcceEEEecccceeeEeeeccccccccccchhHH---HHHHhhhhh
Confidence 346789999999999999999999999999999999999999 88776 4788889999999999822 11111111
Q ss_pred --ecCCCCccccHhhhhhhccccccccccchhHHHHhhhhc--cCCCCCchhhhhhh-------ccCCCCccCccccCcc
Q 000399 444 --SSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLY-------QWTPDECIPEFYCDPQ 512 (1566)
Q Consensus 444 --~~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~-------~~~~~EliPEff~~p~ 512 (1566)
..-.-|+||+++|++.+.|.+|++|+.||+..+...+.. ..|.+-+.+..+-+ ..+++|||| |||.||
T Consensus 950 ~~~e~~~~~~~~~~~s~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~dr~f~~l~~~~~~~~~~s~td~kel~p-~f~~pe 1028 (1081)
T KOG1786|consen 950 WESEDTEPYHYGSHYSNSGTVSHFLIRLPPFTEMFLSLQDGRFDFPDRLFHSLETAWSLASIESSTDVKELIP-FFYLPE 1028 (1081)
T ss_pred hhhhccCCccccccccCccccccccccCCchHHHHHHhccCcCCCcccccccccccccccccccccchhhccc-cccCcc
Confidence 112368999999999999999999999999988765532 22333222222221 136799999 999999
Q ss_pred hhhccC----------CCCcccccCCCCCChHHHHHHhhhhhcccccceeeeeeEE
Q 000399 513 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWID 558 (1566)
Q Consensus 513 ~~~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WID 558 (1566)
++.|-+ ++++||.+ -.+++.||++||.||||+||+.++|+|||
T Consensus 1029 ~l~n~~~~d~g~~qn~~~~~~~~~---~~~~~~~i~~hr~al~s~~v~~~~~~~i~ 1081 (1081)
T KOG1786|consen 1029 FLRNRNGFDFGERQNGERVNDVVL---RGDPRSFILIHRQALESEYVSSNLHTWID 1081 (1081)
T ss_pred eeecCCccccCcccCCCcccceee---ccchHHHHHHHHHhhhcccccccceeccC
Confidence 999753 56899999 67999999999999999999999999998
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.9e-21 Score=220.26 Aligned_cols=203 Identities=15% Similarity=0.156 Sum_probs=156.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc----cccchhhhcCCCCCCCCCCCCc-ccCCCc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ----ESKNFLRLIGVPSFDESSVPGC-LRHPNV 237 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~----~~~~~l~~~g~~~~rEi~iL~~-l~HpNI 237 (1566)
.|++.+.||+|+||.||+|.+.. ..+..+|+|.+........ .....+. ..++|+.++.+ ++||||
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~----~~~~e~~~l~~~~~h~~i 71 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKN-----NGQNLLALKEINVHNPAFGKDKRERDKSIG----DIVSEVTIIKEQLRHPNI 71 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcC-----CCCceeeeeEeeccccccccccccchHHHH----HHHHHHHHHhhcCCCCCe
Confidence 48889999999999999988631 2467899998764322111 0001111 11257777754 799999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccc
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++++..++..++||||+++ +|.+++... ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++
T Consensus 72 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~ 151 (269)
T cd08528 72 VRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD 151 (269)
T ss_pred eeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC
Confidence 9999999999999999999997 998887532 23457888899999999999999996 7899999999999999998
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||++....... ......++..|++||.+.+..++...|+|+.|++ .+..+.|+
T Consensus 152 --~~~l~dfg~~~~~~~~~------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~l-------l~~l~~g~ 210 (269)
T cd08528 152 --KVTITDFGLAKQKQPES------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCI-------LYQMCTLQ 210 (269)
T ss_pred --cEEEecccceeeccccc------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHH-------HHHHHhCC
Confidence 79999999998543210 0122347888999999988888899999999987 66677776
Q ss_pred cc
Q 000399 394 RW 395 (1566)
Q Consensus 394 s~ 395 (1566)
.+
T Consensus 211 ~p 212 (269)
T cd08528 211 PP 212 (269)
T ss_pred Cc
Confidence 54
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.7e-20 Score=199.41 Aligned_cols=231 Identities=15% Similarity=0.180 Sum_probs=191.4
Q ss_pred cccCCCceec-----cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcc
Q 000399 1279 LMKCEPWFWF-----PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1566)
Q Consensus 1279 ~~~H~~~V~~-----fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D 1352 (1566)
.+.|+-.|.. ..|+|++ |++++.|+.=.+-+-+++ -+.+|.||.+.|++.....+-...+|++. |
T Consensus 10 c~ghtrpvvdl~~s~itp~g~f-----lisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaa----d 80 (334)
T KOG0278|consen 10 CHGHTRPVVDLAFSPITPDGYF-----LISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAA----D 80 (334)
T ss_pred EcCCCcceeEEeccCCCCCceE-----EEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcc----c
Confidence 4557767665 3668887 999999998887777776 78899999999999999999999999998 9
Q ss_pred cceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCc-EEEEeecccccccccCCCCCccccc
Q 000399 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGK-LLSVFAEQSMDSLHGGSPSSSISKI 1429 (1566)
Q Consensus 1353 ~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~-~l~~l~~h~~~~~~~~~~~~~~~~~ 1429 (1566)
=|-+|||.-+|..+.++. |...|.+++|+.+..+|++| +..+||+|+..-+ +...+
T Consensus 81 ftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~-------------------- 139 (334)
T KOG0278|consen 81 FTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEI-------------------- 139 (334)
T ss_pred chhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhh--------------------
Confidence 999999999999999985 99999999999999999887 8999999987432 22222
Q ss_pred ccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhc
Q 000399 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1509 (1566)
Q Consensus 1430 ~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~ 1509 (1566)
.+|+.+|..+.|... .+.+++.+.|++||+||.++|..++++.- +..|+++.+
T Consensus 140 ----------~ghtg~Ir~v~wc~e----------D~~iLSSadd~tVRLWD~rTgt~v~sL~~-------~s~VtSlEv 192 (334)
T KOG0278|consen 140 ----------SGHTGGIRTVLWCHE----------DKCILSSADDKTVRLWDHRTGTEVQSLEF-------NSPVTSLEV 192 (334)
T ss_pred ----------cCCCCcceeEEEecc----------CceEEeeccCCceEEEEeccCcEEEEEec-------CCCCcceee
Confidence 345677777777665 56788889999999999999999888753 445566666
Q ss_pred cCCCccc-----------------------------CCCcccchhHHHhccCCCceeEEeeccCceeEEe-eccCceeeE
Q 000399 1510 CGSEKMQ-----------------------------AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW-RAHDGYVTK 1559 (1566)
Q Consensus 1510 s~~~~~~-----------------------------~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l-~gH~~~V~~ 1559 (1566)
++++.+. +...+|+-..+++|+.|..++.||..||+.+..+ ++|-++|.|
T Consensus 193 s~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhc 272 (334)
T KOG0278|consen 193 SQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHC 272 (334)
T ss_pred ccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEE
Confidence 6554322 2336788889999999999999999999999997 899999999
Q ss_pred eeeeccC
Q 000399 1560 VRIISKR 1566 (1566)
Q Consensus 1560 VafspdG 1566 (1566)
|.|+|||
T Consensus 273 VrFSPdG 279 (334)
T KOG0278|consen 273 VRFSPDG 279 (334)
T ss_pred EEECCCC
Confidence 9999997
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.4e-21 Score=216.14 Aligned_cols=191 Identities=20% Similarity=0.228 Sum_probs=154.3
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccCc
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~~ 249 (1566)
||+|+||.||++.+. .++..+|+|.+.+.........+... +|+.+++.++||||+++++.+..+..
T Consensus 1 lg~G~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (250)
T cd05123 1 LGKGSFGKVLLVRKK------DTGKLYAMKVLKKKKIIKRKEVEHTL-------TERNILSRINHPFIVKLHYAFQTEEK 67 (250)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEeehhhhcchHHHHHHH-------HHHHHHHHcCCCcHHHHHHHeecCCe
Confidence 699999999988752 36789999998875443321222222 58899999999999999999999999
Q ss_pred eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcc
Q 000399 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 250 l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~ 328 (1566)
.|+||||+++ +|.+++.. ...+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||++...
T Consensus 68 ~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~--~~~l~d~~~~~~~ 143 (250)
T cd05123 68 LYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG--HIKLTDFGLAKEL 143 (250)
T ss_pred eEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC--cEEEeecCcceec
Confidence 9999999965 99999973 33578889999999999999999999999999999999999998 7999999998864
Q ss_pred ccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 329 SIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..... ......++..|++||...+..++...|.|+.|++ .+..++|+.+
T Consensus 144 ~~~~~-----------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~-------~~~l~~g~~p 192 (250)
T cd05123 144 SSEGS-----------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVL-------LYEMLTGKPP 192 (250)
T ss_pred ccCCC-----------cccCCcCCccccChHHhCCCCCCchhhHHHHHHH-------HHHHHHCCCC
Confidence 42110 0122347778999999988888889999999987 5666677654
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-20 Score=213.05 Aligned_cols=227 Identities=14% Similarity=0.136 Sum_probs=171.7
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeee-hhhhhccCcceeeeecCcc-eEEEeeccCCCccc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASIL-SSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l-~tl~gH~~~V~slafspd~-~~LaSgS~~~~~D~ 1353 (1566)
++..|...|.+ |+.+|.. +.|+|.|+.+++||+++|.+ ..+. -...++|+.|+||+ +.|++|+. |+
T Consensus 253 tf~gH~k~Vrd~~~s~~g~~-----fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~s----d~ 322 (503)
T KOG0282|consen 253 TFKGHRKPVRDASFNNCGTS-----FLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGS----DK 322 (503)
T ss_pred hhhcchhhhhhhhccccCCe-----eeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecC----CC
Confidence 45668888887 8889987 99999999999999999844 4333 45678999999998 78888887 99
Q ss_pred ceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccc--ccccCCCC------
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD--SLHGGSPS------ 1423 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~--~~~~~~~~------ 1423 (1566)
.|+.||+++++.+..|..|-+.|++|.|.+.|++++|. |++++||+.+.+-.+.....+... .++...++
T Consensus 323 ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~a 402 (503)
T KOG0282|consen 323 KIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAA 402 (503)
T ss_pred cEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehh
Confidence 99999999999999999999999999999999998766 999999999988766544332211 11222222
Q ss_pred ----CcccccccCCCCC----CCCccc--ccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeecc
Q 000399 1424 ----SSISKINTDQVGM----LNSNTL--SSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1493 (1566)
Q Consensus 1424 ----~~~~~~~~~~~~~----~~~~~~--~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~ 1493 (1566)
+.+.++.....-. -.+.+| .+.-..+.|||+ |++|++|..||.+.+||.++-+.+..++.
T Consensus 403 Qs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpD----------G~~l~SGdsdG~v~~wdwkt~kl~~~lka 472 (503)
T KOG0282|consen 403 QSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPD----------GRTLCSGDSDGKVNFWDWKTTKLVSKLKA 472 (503)
T ss_pred hccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCC----------CCeEEeecCCccEEEeechhhhhhhcccc
Confidence 2222332211110 112223 233445566654 99999999999999999999999999998
Q ss_pred CCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEe
Q 000399 1494 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1566)
Q Consensus 1494 h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD 1540 (1566)
| ...+..+.|+|... ..+|||+.||.|++||
T Consensus 473 h------~~~ci~v~wHP~e~----------Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 473 H------DQPCIGVDWHPVEP----------SKVATCGWDGLIKIWD 503 (503)
T ss_pred C------CcceEEEEecCCCc----------ceeEecccCceeEecC
Confidence 7 45567777777653 4799999999999997
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.9e-19 Score=188.42 Aligned_cols=227 Identities=17% Similarity=0.255 Sum_probs=175.3
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEe------ee----------eehhhhhccCcceeeeecCc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK------AS----------ILSSIRAHHGALRSVAVGQD 1338 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~------~~----------~l~tl~gH~~~V~slafspd 1338 (1566)
.+....+-.|++ |+|.|.+ .+.||..++.+|.-.. .+ ..+.-+.|.++|.|++|+|+
T Consensus 26 i~~l~dsqairav~fhp~g~l-----yavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ 100 (350)
T KOG0641|consen 26 INILEDSQAIRAVAFHPAGGL-----YAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC 100 (350)
T ss_pred EEEecchhheeeEEecCCCce-----EEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence 333344455665 8999998 8999999998866432 11 11233568999999999999
Q ss_pred ceEEEeeccCCCcccceeeEEeccccccc-----ccccccccccceEEeec----CCceeec---cCcEEEeecCCCcEE
Q 000399 1339 ECTVFTAGIGPGFKGTVQKWELTRINCVS-----GYYGHEEVVNDICVLSS----SGRIASC---DGTLHVWNSQTGKLL 1406 (1566)
Q Consensus 1339 ~~~LaSgS~~~~~D~tVrlWDl~tg~~i~-----tl~gH~~~V~sVafsp~----g~~LaSg---DgtIkLWDl~tg~~l 1406 (1566)
|.+++|||. |++|++-......|.. .+.-|.+.|..++|..+ +..++|+ |..|.+-|-.+|+..
T Consensus 101 geliatgsn----dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~ 176 (350)
T KOG0641|consen 101 GELIATGSN----DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGF 176 (350)
T ss_pred cCeEEecCC----CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcc
Confidence 999999998 9999998776555443 35679999999999643 3345665 888888899999999
Q ss_pred EEeecccccccccCCCCCcccccccCCCCCCCCcccccccccc-cccchhHHHhhhhhccceEEEEecCceEEEEEccCC
Q 000399 1407 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILST-AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485 (1566)
Q Consensus 1407 ~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv-afsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg 1485 (1566)
.-+.+|.+. |.++ .|+ |-.+++||.|.+||+||++..
T Consensus 177 ~a~sghtgh------------------------------ilalyswn------------~~m~~sgsqdktirfwdlrv~ 214 (350)
T KOG0641|consen 177 HALSGHTGH------------------------------ILALYSWN------------GAMFASGSQDKTIRFWDLRVN 214 (350)
T ss_pred eeecCCccc------------------------------EEEEEEec------------CcEEEccCCCceEEEEeeecc
Confidence 888877443 3332 232 569999999999999999999
Q ss_pred ceeeeeccCCcccC-chhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1486 QKLHLWRGEPTELG-FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1486 ~~l~~~~~h~~~v~-~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
.++.++.......+ -++.|.+||++ |.|++|++|-.|..+.+||++-|+.++.+..|...|+||.|+|
T Consensus 215 ~~v~~l~~~~~~~glessavaav~vd-----------psgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp 283 (350)
T KOG0641|consen 215 SCVNTLDNDFHDGGLESSAVAAVAVD-----------PSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSP 283 (350)
T ss_pred ceeeeccCcccCCCcccceeEEEEEC-----------CCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCC
Confidence 99988764422111 13566777766 5668999999999999999999999999999999999999998
Q ss_pred c
Q 000399 1565 K 1565 (1566)
Q Consensus 1565 d 1565 (1566)
.
T Consensus 284 ~ 284 (350)
T KOG0641|consen 284 G 284 (350)
T ss_pred C
Confidence 4
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.9e-19 Score=195.04 Aligned_cols=258 Identities=14% Similarity=0.151 Sum_probs=189.0
Q ss_pred CCCceec--cCCCCCCCCCcccccccCccCCCCceE-eeeeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeE
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKI-KASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl-~~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlW 1358 (1566)
|+-.+.. ++.+|.+ |.|++.|.++.||-- ++..+.++.||+++|+|+...-+...++|||. |.++++|
T Consensus 9 HERplTqiKyN~eGDL-----lFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSA----D~t~kLW 79 (327)
T KOG0643|consen 9 HERPLTQIKYNREGDL-----LFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSA----DQTAKLW 79 (327)
T ss_pred CccccceEEecCCCcE-----EEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccc----cceeEEE
Confidence 5555544 5777776 999999999999976 45599999999999999999999999999999 9999999
Q ss_pred EecccccccccccccccccceEEeecCCcee-ec------cCcEEEeecC-------CCcEEEEeecccc----------
Q 000399 1359 ELTRINCVSGYYGHEEVVNDICVLSSSGRIA-SC------DGTLHVWNSQ-------TGKLLSVFAEQSM---------- 1414 (1566)
Q Consensus 1359 Dl~tg~~i~tl~gH~~~V~sVafsp~g~~La-Sg------DgtIkLWDl~-------tg~~l~~l~~h~~---------- 1414 (1566)
|+.+|+++.+++ -..+|..+.|+.+|.+++ +. -+.|.++|++ ..++...+..+..
T Consensus 80 Dv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l 158 (327)
T KOG0643|consen 80 DVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL 158 (327)
T ss_pred EcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc
Confidence 999999999986 467899999999999874 33 4679999998 3444555443322
Q ss_pred -cccccCCCCCcccccccCCCCC-CC-CcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee
Q 000399 1415 -DSLHGGSPSSSISKINTDQVGM-LN-SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW 1491 (1566)
Q Consensus 1415 -~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~ 1491 (1566)
..+..+..++.+..|+...... +. ...|+..|+.+.++++ ..+++|||.|.+.++||.++-+++.++
T Consensus 159 ~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d----------~T~FiT~s~Dttakl~D~~tl~v~Kty 228 (327)
T KOG0643|consen 159 GETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRD----------RTYFITGSKDTTAKLVDVRTLEVLKTY 228 (327)
T ss_pred CCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCC----------cceEEecccCccceeeeccceeeEEEe
Confidence 2334444555666666654322 22 2457778888887776 889999999999999999999999999
Q ss_pred ccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhcc-CCC--ceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL-SSG--QCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs-~Dg--~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
... .+|++.+++|-.....++-..+.+=+-+.+ ..| ..|+|++-..+.+..++||-++|++|+|+|||
T Consensus 229 ~te-------~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdG 299 (327)
T KOG0643|consen 229 TTE-------RPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDG 299 (327)
T ss_pred eec-------ccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCC
Confidence 854 467888887755432221111111111111 111 23455555556788899999999999999997
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-20 Score=254.07 Aligned_cols=188 Identities=16% Similarity=0.155 Sum_probs=152.0
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
....|...+.||+|+||.||+|++. .++..||+|.+........ +|+++|++++|||||+
T Consensus 688 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~~vavK~~~~~~~~~~--------------~~~~~l~~l~HpnIv~ 747 (968)
T PLN00113 688 ILSSLKEENVISRGKKGASYKGKSI------KNGMQFVVKEINDVNSIPS--------------SEIADMGKLQHPNIVK 747 (968)
T ss_pred HHhhCCcccEEccCCCeeEEEEEEC------CCCcEEEEEEccCCccccH--------------HHHHHHhhCCCCCcce
Confidence 3456778889999999999998753 4688999998764321111 3677889999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHh---hccccCCCccCCCccccccchh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH---SLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH---~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
+++++.+.+..|+||||+++ +|.++++. ++...+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 748 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~-- 820 (968)
T PLN00113 748 LIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD-- 820 (968)
T ss_pred EEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC--
Confidence 99999999999999999996 99999962 567778889999999999999 67999999999999999887
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..++. ||.++.... ...+.+|+.|+|||++.+..|+.+.|+|+.|++ .++.++|+.+
T Consensus 821 ~~~~~-~~~~~~~~~---------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvv-------l~el~tg~~p 877 (968)
T PLN00113 821 EPHLR-LSLPGLLCT---------------DTKCFISSAYVAPETRETKDITEKSDIYGFGLI-------LIELLTGKSP 877 (968)
T ss_pred ceEEE-ecccccccc---------------CCCccccccccCcccccCCCCCcccchhhHHHH-------HHHHHhCCCC
Confidence 45554 665543221 011247889999999999999999999999988 7888888876
Q ss_pred CC
Q 000399 396 GD 397 (1566)
Q Consensus 396 ~d 397 (1566)
.+
T Consensus 878 ~~ 879 (968)
T PLN00113 878 AD 879 (968)
T ss_pred CC
Confidence 43
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.3e-19 Score=203.58 Aligned_cols=208 Identities=20% Similarity=0.284 Sum_probs=179.3
Q ss_pred ccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccc
Q 000399 1300 FLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1566)
Q Consensus 1300 ~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~s 1378 (1566)
+++|||.|+.+.++|...+ .+.+++||...|+++.++++...++++|. |..|+||......+......|.++|+.
T Consensus 233 ~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa----d~~i~vws~~~~s~~~~~~~h~~~V~~ 308 (506)
T KOG0289|consen 233 KILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASA----DEIIRVWSVPLSSEPTSSRPHEEPVTG 308 (506)
T ss_pred cceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCC----cceEEeeccccccCcccccccccccee
Confidence 3999999999999998875 78999999999999999999999999999 999999999988888888999999999
Q ss_pred eEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhH
Q 000399 1379 ICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1566)
Q Consensus 1379 Vafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~ 1456 (1566)
+..+|.|.++++. |++..+.|.++|+++....... ..-.+.+.+|||+
T Consensus 309 ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~----------------------------s~v~~ts~~fHpD-- 358 (506)
T KOG0289|consen 309 LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDET----------------------------SDVEYTSAAFHPD-- 358 (506)
T ss_pred eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecc----------------------------ccceeEEeeEcCC--
Confidence 9999999999665 9999999999999987665421 0223556677765
Q ss_pred HHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCce
Q 000399 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1566)
Q Consensus 1457 t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I 1536 (1566)
|.++.+|+.||.|+|||+.++..+..|.+| ++.|.+|+|+ .+|-|+|++.+|+.|
T Consensus 359 --------gLifgtgt~d~~vkiwdlks~~~~a~Fpgh------t~~vk~i~Fs-----------ENGY~Lat~add~~V 413 (506)
T KOG0289|consen 359 --------GLIFGTGTPDGVVKIWDLKSQTNVAKFPGH------TGPVKAISFS-----------ENGYWLATAADDGSV 413 (506)
T ss_pred --------ceEEeccCCCceEEEEEcCCccccccCCCC------CCceeEEEec-----------cCceEEEEEecCCeE
Confidence 999999999999999999999999999877 5667777665 667899999999999
Q ss_pred eEEeeccCceeEEeeccC-ceeeEeeeeccC
Q 000399 1537 RLFDVRSGNVIASWRAHD-GYVTKVRIISKR 1566 (1566)
Q Consensus 1537 ~lWD~~sgk~l~~l~gH~-~~V~~VafspdG 1566 (1566)
++||+|.-+...++.-.+ ..|.++.|.+.|
T Consensus 414 ~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SG 444 (506)
T KOG0289|consen 414 KLWDLRKLKNFKTIQLDEKKEVNSLSFDQSG 444 (506)
T ss_pred EEEEehhhcccceeeccccccceeEEEcCCC
Confidence 999999999888886433 358888887765
|
|
| >KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.78 E-value=4e-19 Score=204.84 Aligned_cols=255 Identities=18% Similarity=0.227 Sum_probs=197.9
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeee------------------hhh-hhccCcceeeeecCc
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASIL------------------SSI-RAHHGALRSVAVGQD 1338 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l------------------~tl-~gH~~~V~slafspd 1338 (1566)
..|.-.+.+ ++||+.+ ..++|.|++|.-|++.++.. ..- ++|.+.|.++|.++|
T Consensus 139 ~~H~~s~~~vals~d~~~-----~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 139 GKHQLSVTSVALSPDDKR-----VFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred ccccCcceEEEeeccccc-----eeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence 345555555 7999998 99999999999999876521 011 389999999999999
Q ss_pred ceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccc
Q 000399 1339 ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDS 1416 (1566)
Q Consensus 1339 ~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~ 1416 (1566)
|.+|+||+. |+.|.|||..+.+.+.++++|.+.|.+++|-.....+.|+ |++|++|++.....+.++-+|.+.+
T Consensus 214 gkylatgg~----d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v 289 (479)
T KOG0299|consen 214 GKYLATGGR----DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGV 289 (479)
T ss_pred CcEEEecCC----CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccce
Confidence 999999998 9999999999999999999999999999998777766444 9999999999877777777776542
Q ss_pred c-----------ccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC
Q 000399 1417 L-----------HGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485 (1566)
Q Consensus 1417 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg 1485 (1566)
. +.+.-+....+|.........+.++...+.|++|-.+ ..+++||.||.|.+|++.+.
T Consensus 290 ~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~-----------~HfvsGSdnG~IaLWs~~KK 358 (479)
T KOG0299|consen 290 LGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND-----------EHFVSGSDNGSIALWSLLKK 358 (479)
T ss_pred eeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecc-----------cceeeccCCceEEEeeeccc
Confidence 2 2222334445555544444555566777888877653 58999999999999999999
Q ss_pred ceeeeeccCCc------ccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccC----ceeEEeeccCc
Q 000399 1486 QKLHLWRGEPT------ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG----NVIASWRAHDG 1555 (1566)
Q Consensus 1486 ~~l~~~~~h~~------~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg----k~l~~l~gH~~ 1555 (1566)
+++.+.+...+ .++++.||++++.. |...++|+||.||.||+|-+.+| +++..+. -.+
T Consensus 359 kplf~~~~AHgv~~~~~~~~~~~Witsla~i-----------~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~G 426 (479)
T KOG0299|consen 359 KPLFTSRLAHGVIPELDPVNGNFWITSLAVI-----------PGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVG 426 (479)
T ss_pred CceeEeeccccccCCccccccccceeeeEec-----------ccCceEEecCCCCceEEEEecCCccccceeeecc-ccc
Confidence 99988764422 12223377777765 44468999999999999999887 4666666 578
Q ss_pred eeeEeeeeccC
Q 000399 1556 YVTKVRIISKR 1566 (1566)
Q Consensus 1556 ~V~~VafspdG 1566 (1566)
.|++|+|+++|
T Consensus 427 fVNsl~f~~sg 437 (479)
T KOG0299|consen 427 FVNSLAFSNSG 437 (479)
T ss_pred EEEEEEEccCC
Confidence 99999999886
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-20 Score=232.04 Aligned_cols=186 Identities=18% Similarity=0.135 Sum_probs=148.6
Q ss_pred cccceeeeecchhh-HHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccccc
Q 000399 164 LFPIAFIGICSYSI-FEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVL 241 (1566)
Q Consensus 164 y~~~~~IG~G~fG~-Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~ 241 (1566)
|..-+.+|.|+-|+ ||+|. -.++.||||.+-.+.. .+.. ||+..|+.- +|||||++|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~--------ye~R~VAVKrll~e~~------~~A~-------rEi~lL~eSD~H~NviRyy 569 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV--------YEGREVAVKRLLEEFF------DFAQ-------REIQLLQESDEHPNVIRYY 569 (903)
T ss_pred eccHHHcccCCCCcEEEEEe--------eCCceehHHHHhhHhH------HHHH-------HHHHHHHhccCCCceEEEE
Confidence 44567789999986 77766 4688999999765322 2333 899999888 599999999
Q ss_pred ccccccCceeeeccCCccchhhhhccC-cccc-cchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc---cchhh
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFS-PNAL-KSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD---SCWSW 316 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~-~~~~-l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~---~~~~~ 316 (1566)
+.-.++..+||++|.|..+|.+++... .... ......+.++.|++.||++||+.+||||||||.||||+. ++...
T Consensus 570 c~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~r 649 (903)
T KOG1027|consen 570 CSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLR 649 (903)
T ss_pred eeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCccee
Confidence 999999999999999999999999853 1111 112456889999999999999999999999999999987 34458
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
++|+|||+++....... ... ...++.||..|+|||++....-...+|+.+.||+
T Consensus 650 a~iSDfglsKkl~~~~s-------S~~-r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCv 703 (903)
T KOG1027|consen 650 AKISDFGLSKKLAGGKS-------SFS-RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCV 703 (903)
T ss_pred EEecccccccccCCCcc-------hhh-cccCCCCcccccCHHHHhccccCcccchhhcCce
Confidence 99999999997663211 111 1456789999999999988777789999999999
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-19 Score=196.23 Aligned_cols=230 Identities=18% Similarity=0.231 Sum_probs=175.0
Q ss_pred HhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhh-hccCcceeeeecCcceEEEeeccCCC
Q 000399 1275 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIR-AHHGALRSVAVGQDECTVFTAGIGPG 1350 (1566)
Q Consensus 1275 ~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~-gH~~~V~slafspd~~~LaSgS~~~~ 1350 (1566)
+..++.-+.+.|.| ||.|... +|+|+.||.|++|.+.++ |++.|. +|+..|+|+.|+.|+..+.|+|-
T Consensus 255 Aqd~fMMmd~aVlci~FSRDsEM-----lAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sf--- 326 (508)
T KOG0275|consen 255 AQDNFMMMDDAVLCISFSRDSEM-----LASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASF--- 326 (508)
T ss_pred hhcceeecccceEEEeecccHHH-----hhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccc---
Confidence 34566778899998 8999887 999999999999999987 888885 99999999999999999999986
Q ss_pred cccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccc----ccccCCCCC
Q 000399 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD----SLHGGSPSS 1424 (1566)
Q Consensus 1351 ~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~----~~~~~~~~~ 1424 (1566)
|.+||+.-+.+|+|++.+.||.+.|+...|+++|..++|+ ||+|++|+..+++|+.++...... .+....-+.
T Consensus 327 -D~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnp 405 (508)
T KOG0275|consen 327 -DQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNP 405 (508)
T ss_pred -cceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCC
Confidence 9999999999999999999999999999999999999766 999999999999999998753221 000000111
Q ss_pred cccccccCC---------CCCCCCcc----cccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee
Q 000399 1425 SISKINTDQ---------VGMLNSNT----LSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW 1491 (1566)
Q Consensus 1425 ~~~~~~~~~---------~~~~~~~~----~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~ 1491 (1566)
...++.+.. +.++.... ..+...+... +|-|.++.+.+.|+.+.-+...+|+.-+++
T Consensus 406 eh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~l----------SpkGewiYcigED~vlYCF~~~sG~LE~tl 475 (508)
T KOG0275|consen 406 EHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAIL----------SPKGEWIYCIGEDGVLYCFSVLSGKLERTL 475 (508)
T ss_pred ceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEe----------cCCCcEEEEEccCcEEEEEEeecCceeeee
Confidence 111111111 11111100 1111222233 455999999999999999999999999999
Q ss_pred ccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEe
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD 1540 (1566)
..|... |-.++- +|....||+-+.||.+++|.
T Consensus 476 ~VhEkd------vIGl~H-----------HPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 476 PVHEKD------VIGLTH-----------HPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eccccc------cccccc-----------CcccchhhhhcccchhhhcC
Confidence 887543 233333 35557899999999999995
|
|
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-19 Score=213.71 Aligned_cols=199 Identities=17% Similarity=0.252 Sum_probs=166.7
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeee-cCcceEEEeeccCCCccc
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAV-GQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slaf-spd~~~LaSgS~~~~~D~ 1353 (1566)
..|++||.+ .-.+|+. |+|+|.|-+|++|+.... +..+++.|.+-|.|++. .++...+||||- |+
T Consensus 70 e~HsDWVNDiiL~~~~~t-----lIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGL----D~ 140 (735)
T KOG0308|consen 70 EHHSDWVNDIILCGNGKT-----LISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGL----DR 140 (735)
T ss_pred hhhHhHHhhHHhhcCCCc-----eEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCC----Cc
Confidence 349999998 4555665 999999999999998754 88999999999999999 889999999998 99
Q ss_pred ceeeEEecccc--cc--------cccc-cccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccC
Q 000399 1354 TVQKWELTRIN--CV--------SGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGG 1420 (1566)
Q Consensus 1354 tVrlWDl~tg~--~i--------~tl~-gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~ 1420 (1566)
.|.|||+.++. .+ ..+. ||..+|++++.++.|..+|+| .+.+++||.++++.+..+.+|.
T Consensus 141 ~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHT------- 213 (735)
T KOG0308|consen 141 KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHT------- 213 (735)
T ss_pred cEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccc-------
Confidence 99999998772 22 2233 899999999999999888887 8999999999999998888874
Q ss_pred CCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCc
Q 000399 1421 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGF 1500 (1566)
Q Consensus 1421 ~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~ 1500 (1566)
..|..+..++ ||+.+++||+||+||+||++..+|++++..|...
T Consensus 214 -----------------------dNVr~ll~~d----------DGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~--- 257 (735)
T KOG0308|consen 214 -----------------------DNVRVLLVND----------DGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG--- 257 (735)
T ss_pred -----------------------cceEEEEEcC----------CCCeEeecCCCceEEeeeccccceeeeEEeccCc---
Confidence 3455555554 4999999999999999999999999999988432
Q ss_pred hhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccC
Q 000399 1501 PSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG 1544 (1566)
Q Consensus 1501 ~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg 1544 (1566)
|.++..+ |+...+.+|+.||.|..=|+++-
T Consensus 258 ---VWaL~~~-----------~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 258 ---VWALQSS-----------PSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred ---eEEEeeC-----------CCcceEEecCCCCcEEecccCCc
Confidence 4555544 45578999999999999999983
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.5e-19 Score=198.83 Aligned_cols=230 Identities=17% Similarity=0.182 Sum_probs=175.0
Q ss_pred ccccCCCceec---cCCCCCCCCCcccccccCccCCCCceEeee-----eehhhhhccCcceeeeecCcceEEEeeccCC
Q 000399 1278 NLMKCEPWFWF---PTPAASWDGPDFLGRVGGLKDESPWKIKAS-----ILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1566)
Q Consensus 1278 ~~~~H~~~V~~---fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-----~l~tl~gH~~~V~slafspd~~~LaSgS~~~ 1349 (1566)
...+|++.+.+ ..++..- ..++++|.|.++++|..+.+ .++..+||...|.+|+..++|..++|||.
T Consensus 139 ~~~Ght~~ik~v~~v~~n~~~---~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~-- 213 (423)
T KOG0313|consen 139 TIVGHTGPIKSVAWVIKNSSS---CLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSW-- 213 (423)
T ss_pred EEecCCcceeeeEEEecCCcc---ceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecc--
Confidence 35567777775 2333321 13999999999999998865 34555699999999999999999999998
Q ss_pred CcccceeeEEec-------------------------ccccccccccccccccceEEeecCCceeec--cCcEEEeecCC
Q 000399 1350 GFKGTVQKWELT-------------------------RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQT 1402 (1566)
Q Consensus 1350 ~~D~tVrlWDl~-------------------------tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~t 1402 (1566)
|.++++|+.+ +..++-++.||++.|.+|-|++ ...+.|+ |.+|+.||+.+
T Consensus 214 --D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDlet 290 (423)
T KOG0313|consen 214 --DTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLET 290 (423)
T ss_pred --cceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeec
Confidence 9999999932 1234566899999999999988 4444444 99999999999
Q ss_pred CcEEEEeeccccc----------ccccCCCCCcccccccCCC--CCC--CCcccccccccccccchhHHHhhhhhccceE
Q 000399 1403 GKLLSVFAEQSMD----------SLHGGSPSSSISKINTDQV--GML--NSNTLSSGILSTAFDGNLYTCLHHIECVERL 1468 (1566)
Q Consensus 1403 g~~l~~l~~h~~~----------~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~V~svafsp~~~t~v~~~pdg~~L 1468 (1566)
|+++.++.+.... .+.+++.+..+.+|+.+.. .++ .+.+|.+.|.++.|+|. +-..|
T Consensus 291 g~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~---------~~~~~ 361 (423)
T KOG0313|consen 291 GGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPT---------NEFQL 361 (423)
T ss_pred ccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCC---------CceEE
Confidence 9988877654332 2233344445566665432 222 35679999999999997 36789
Q ss_pred EEEecCceEEEEEccCCc-eeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeec
Q 000399 1469 VVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1469 ~sgs~DgtIrlWDi~tg~-~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
++|+.|+++++||+|+.+ .+..+.+| ...|-++.++ .|..|+||+.|++|+++...
T Consensus 362 ~S~S~D~t~klWDvRS~k~plydI~~h------~DKvl~vdW~------------~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 362 VSGSYDNTVKLWDVRSTKAPLYDIAGH------NDKVLSVDWN------------EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred EEEecCCeEEEEEeccCCCcceeeccC------CceEEEEecc------------CCceEEeccCcceEEEeccc
Confidence 999999999999999987 88888877 4556666665 34589999999999998754
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.7e-20 Score=214.74 Aligned_cols=185 Identities=18% Similarity=0.160 Sum_probs=143.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
....++.+.||+|.||.||+|.. +++.||||++... ....|.+ -++|--+-.++|+||+++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--------~~~~VAVKifp~~-----~kqs~~~------Ek~Iy~lp~m~h~nIl~F 269 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--------DNRLVAVKIFPEQ-----EKQSFQN------EKNIYSLPGMKHENILQF 269 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--------cCceeEEEecCHH-----HHHHHHh------HHHHHhccCccchhHHHh
Confidence 45678899999999999999984 5699999997652 2334443 133444556789999999
Q ss_pred cccccccC----ceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh---------ccccCCCccCCC
Q 000399 241 LGLLKTSG----LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS---------LGIAHRSVCPSN 306 (1566)
Q Consensus 241 ~~~~~~~~----~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~---------~gIiHrDLKp~N 306 (1566)
+++-+... .++||+||.+ |+|.++|+ ...++-.....++.-+++||+|||+ ..|+|||||..|
T Consensus 270 i~~ekr~t~~~~eywLVt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkN 346 (534)
T KOG3653|consen 270 IGAEKRGTADRMEYWLVTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKN 346 (534)
T ss_pred hchhccCCccccceeEEeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccc
Confidence 99987655 8999999999 59999998 3346777789999999999999997 469999999999
Q ss_pred ccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chh-----hcccccccccc
Q 000399 307 VLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWH-----SQFNRWWRGEL 378 (1566)
Q Consensus 307 ILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~-----~~~d~Ws~G~i 378 (1566)
|||.+++ ..-|+|||+|...... ..... ..+-+||..|||||++.+. .+. ..+|+|+.|-+
T Consensus 347 VLvK~Dl--TccIaDFGLAl~~~p~----~~~~d-----~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLV 413 (534)
T KOG3653|consen 347 VLVKNDL--TCCIADFGLALRLEPG----KPQGD-----THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLV 413 (534)
T ss_pred eEEccCC--cEEeeccceeEEecCC----CCCcc-----hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHH
Confidence 9999999 7999999999865521 11111 1224699999999999653 222 36788888854
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.5e-18 Score=195.24 Aligned_cols=216 Identities=19% Similarity=0.316 Sum_probs=169.9
Q ss_pred ehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEE
Q 000399 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHV 1397 (1566)
Q Consensus 1320 l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkL 1397 (1566)
+.++++|.+.|++++|+|++.++++++. |+.|++|++.+++....+.+|...+.++.|+++++.++++ ||.|++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSG----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeec----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 4678899999999999999999999998 8999999999988888889999999999999999887655 999999
Q ss_pred eecCCCcEEEEeecccccccc-----------cCCCCCcccccccCCC-CCCCCcccccccccccccchhHHHhhhhhcc
Q 000399 1398 WNSQTGKLLSVFAEQSMDSLH-----------GGSPSSSISKINTDQV-GMLNSNTLSSGILSTAFDGNLYTCLHHIECV 1465 (1566)
Q Consensus 1398 WDl~tg~~l~~l~~h~~~~~~-----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~V~svafsp~~~t~v~~~pdg 1465 (1566)
||+.+++.+..+..+...... .+..++.+.+|+.... ....+..|...|.+++|+|+ +
T Consensus 78 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------~ 147 (289)
T cd00200 78 WDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPD----------G 147 (289)
T ss_pred EEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCc----------C
Confidence 999988877777665432211 1111333444443321 12223345566777777765 7
Q ss_pred ceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc
Q 000399 1466 ERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN 1545 (1566)
Q Consensus 1466 ~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk 1545 (1566)
+++++++.|+.|++||+++++.+..+..| ...|.+++++ ++++.+++++.|+.|++||+++++
T Consensus 148 ~~l~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~-----------~~~~~l~~~~~~~~i~i~d~~~~~ 210 (289)
T cd00200 148 TFVASSSQDGTIKLWDLRTGKCVATLTGH------TGEVNSVAFS-----------PDGEKLLSSSSDGTIKLWDLSTGK 210 (289)
T ss_pred CEEEEEcCCCcEEEEEccccccceeEecC------ccccceEEEC-----------CCcCEEEEecCCCcEEEEECCCCc
Confidence 88888888999999999999888888755 3455666665 555678888889999999999999
Q ss_pred eeEEeeccCceeeEeeeeccC
Q 000399 1546 VIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1546 ~l~~l~gH~~~V~~VafspdG 1566 (1566)
.+..+.+|...|.+++|+|++
T Consensus 211 ~~~~~~~~~~~i~~~~~~~~~ 231 (289)
T cd00200 211 CLGTLRGHENGVNSVAFSPDG 231 (289)
T ss_pred eecchhhcCCceEEEEEcCCC
Confidence 999998999999999999863
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8e-20 Score=218.65 Aligned_cols=171 Identities=15% Similarity=0.033 Sum_probs=121.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccc--ccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKA--SGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.++|++.+.||+|+||+||+|+++. .++..+|||++..... ......+.+. +|+++|+.++|+||+
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~-------~E~~iL~~L~h~~iv 84 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAG-----DPGTARAVRRRVSEVPWWSKPLARHLAA-------REIRALKTVRGIGVV 84 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcC-----CCCeEEEEEEecccccccccHHHHHHHH-------HHHHHHHhccCCCCC
Confidence 5679999999999999999987531 2466789998753211 0111122232 799999999999998
Q ss_pred c-ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCc-cCCCccccccchh
Q 000399 239 P-VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV-CPSNVLLTDSCWS 315 (1566)
Q Consensus 239 ~-l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDL-Kp~NILl~~~~~~ 315 (1566)
+ +++. +..||||||++| +|.. +. +.. ...++.|++.||.|||++||+|||| ||+|||++.++
T Consensus 85 ~~l~~~----~~~~LVmE~~~G~~L~~-~~--~~~------~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~-- 149 (365)
T PRK09188 85 PQLLAT----GKDGLVRGWTEGVPLHL-AR--PHG------DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDG-- 149 (365)
T ss_pred cEEEEc----CCcEEEEEccCCCCHHH-hC--ccc------hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCC--
Confidence 5 5442 458999999998 7752 22 111 1457899999999999999999999 99999998887
Q ss_pred hhhhcCcCCCCccccccccCCCCCCcee--eeecCCcccccccccccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIG--CCIEGCSSQGLYADLKLSQS 363 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~--~~~~~~~gt~~Y~APE~l~~ 363 (1566)
.+||+|||+|+...... ...... .-.++..++..|+|||++..
T Consensus 150 ~ikLiDFGlA~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 150 EAAVIDFQLASVFRRRG-----ALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred CEEEEECccceecccCc-----chhhhhhhhhhhhhhccCccCCcccCCh
Confidence 69999999999654211 000000 00123446777899998854
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-17 Score=186.58 Aligned_cols=232 Identities=17% Similarity=0.198 Sum_probs=174.0
Q ss_pred eeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcE
Q 000399 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1395 (1566)
Q Consensus 1318 ~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtI 1395 (1566)
..+.+|..|+.+|.+|+.+|+.++++|||. |..-.||++.+|.....+.||++.|+++.|+.+|.+||+| +|.|
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGg----DD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v 130 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGG----DDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKV 130 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCC----CceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccE
Confidence 356788999999999999999999999998 8999999999999999999999999999999999999999 8999
Q ss_pred EEeecCCCcEEEEeec----------cc-ccccccCCCCCcccccccCC-CCCCCCcccccccccccccchhHHHhhhhh
Q 000399 1396 HVWNSQTGKLLSVFAE----------QS-MDSLHGGSPSSSISKINTDQ-VGMLNSNTLSSGILSTAFDGNLYTCLHHIE 1463 (1566)
Q Consensus 1396 kLWDl~tg~~l~~l~~----------h~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~V~svafsp~~~t~v~~~p 1463 (1566)
+||+..+|.....+.. |. ......++.++.+.+|.... .....+.+|+..+++-.|.|
T Consensus 131 ~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p---------- 200 (399)
T KOG0296|consen 131 LVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP---------- 200 (399)
T ss_pred EEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC----------
Confidence 9999999988877742 21 11333444555566665544 33344556666666666655
Q ss_pred ccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh---hHHHh----------------------hccC-------
Q 000399 1464 CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS---LVSAI----------------------CACG------- 1511 (1566)
Q Consensus 1464 dg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~---~V~sv----------------------~~s~------- 1511 (1566)
||+.+++|..||+|++||..+|+++++.......-.+.- ..... +.++
T Consensus 201 dGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~ 280 (399)
T KOG0296|consen 201 DGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKP 280 (399)
T ss_pred CCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccc
Confidence 599999999999999999999999988873321000000 00000 0000
Q ss_pred -----CCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1512 -----SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1512 -----~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
...+-.+.+|..-.+.|+|+-||+|-|||+.+.+....+. |+..|+.+.|-+
T Consensus 281 ~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~ 337 (399)
T KOG0296|consen 281 SQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLN 337 (399)
T ss_pred cchhhhhhhhhcccccccchhhcccccceEEEEecccchhheecc-CCCceEEEEEcC
Confidence 0011123355566789999999999999999888877776 999999999976
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-19 Score=232.89 Aligned_cols=209 Identities=22% Similarity=0.244 Sum_probs=163.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCC-cchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGC-LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
+..+.+.||+|.||.|++|.-+..... ......||||.++..... .+.+.+. .|+.+|+.+ +||||+.+
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~--------~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLM--------SELNVLKELGKHPNIVNL 367 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHH--------HHHHHHHHhcCCcchhhh
Confidence 446777999999999999874321111 123678999998876444 4444454 599999999 59999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc------------c--cccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP------------N--ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------~--~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
+|++..++.+++|+||+.. +|.++++..+ . ..++..+...+++||+.|++||+++.+|||||...
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 9999999999999999995 9999998654 0 12677788999999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcc--cccccccccccccchhhccccccccccCCchh
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS--QGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 383 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APE~l~~~~y~~~~d~Ws~G~isnfey 383 (1566)
|||++.+. .+||+|||+||.......+... ...+ ...|||||.+....|+.++|+|+.|++
T Consensus 448 NVLi~~~~--~~kIaDFGlar~~~~~~~y~~~----------~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~----- 510 (609)
T KOG0200|consen 448 NVLITKNK--VIKIADFGLARDHYNKDYYRTK----------SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGIL----- 510 (609)
T ss_pred hEEecCCC--EEEEccccceeccCCCCceEec----------CCCCccceeecCHHHhccCcccccchhhHHHHH-----
Confidence 99999998 7999999999964432222111 1112 223999999999999999999999987
Q ss_pred hhHHHhhcccccCC
Q 000399 384 LLFLNKLAGRRWGD 397 (1566)
Q Consensus 384 L~~ln~~agrs~~d 397 (1566)
|+.+-.+.|-+|.+
T Consensus 511 L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 511 LWEIFTLGGTPYPG 524 (609)
T ss_pred HHHHhhCCCCCCCC
Confidence 55666666766644
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.9e-20 Score=198.45 Aligned_cols=198 Identities=18% Similarity=0.188 Sum_probs=152.2
Q ss_pred hhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCC
Q 000399 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHP 235 (1566)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~Hp 235 (1566)
.....+.|.+.+.||+|.||.+-+|+++ .++..+++|-+.+.... .++|. ||..---.| .|.
T Consensus 19 kv~l~d~y~I~k~lgeG~FgkIlL~eHr------~s~t~ivlKavp~p~tt---~~dF~--------rEfhY~~~Ls~H~ 81 (378)
T KOG1345|consen 19 KVDLEDVYTINKQLGEGRFGKILLAEHR------QSKTRIVLKAVPRPQTT---QADFV--------REFHYSFFLSPHQ 81 (378)
T ss_pred ccchhhhhhHHHHhcccceeeEEeeecc------CCceEEEeeccCcchhh---HHHHH--------HHhccceeeccch
Confidence 3445678999999999999999999984 67888999998765332 34555 477665555 489
Q ss_pred Cccccccc-ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 236 NVAPVLGL-LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 236 NIV~l~~~-~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
||+.-|++ |++.+.+++++||++. +|.+-+. ...+.|...+.++.|+++|+.|+|++++||||||.+||||-...
T Consensus 82 hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d 158 (378)
T KOG1345|consen 82 HIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD 158 (378)
T ss_pred hhhHHHHHHhhcCceEEEeeccCccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC
Confidence 99998874 7888888999999995 9988886 23467888899999999999999999999999999999996554
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc-----hhhccccccccccCCchhhhHHH
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-----WHSQFNRWWRGELSNFEYLLFLN 388 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-----y~~~~d~Ws~G~isnfeyL~~ln 388 (1566)
..++||||||+.+......++ . --+..|.+||+..... -.+..|.|..|.| +++
T Consensus 159 f~rvKlcDFG~t~k~g~tV~~-------~-------~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi-------~f~ 217 (378)
T KOG1345|consen 159 FYRVKLCDFGLTRKVGTTVKY-------L-------EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGII-------FFY 217 (378)
T ss_pred ccEEEeeecccccccCceehh-------h-------hhhcccCCcHHHhhccccceEecccccchheeee-------eee
Confidence 458999999998854321111 0 1233488898775332 2447799999988 777
Q ss_pred hhccccc
Q 000399 389 KLAGRRW 395 (1566)
Q Consensus 389 ~~agrs~ 395 (1566)
.+.|..+
T Consensus 218 cltG~~P 224 (378)
T KOG1345|consen 218 CLTGKFP 224 (378)
T ss_pred eecCCCc
Confidence 7788654
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-18 Score=198.20 Aligned_cols=209 Identities=16% Similarity=0.235 Sum_probs=167.8
Q ss_pred CcccccccCccCCCCceEeee--ee---------hhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEecccc-
Q 000399 1298 PDFLGRVGGLKDESPWKIKAS--IL---------SSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRIN- 1364 (1566)
Q Consensus 1298 ~~~LaSgS~D~~I~vWdl~~~--~l---------~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg~- 1364 (1566)
+..+|+++..+.|.|||.... .. ..++||++.-++++|++ +...++||+. |++|++||+....
T Consensus 137 p~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~----d~~i~lwdi~~~~~ 212 (422)
T KOG0264|consen 137 PNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSD----DHTICLWDINAESK 212 (422)
T ss_pred CcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccC----CCcEEEEecccccc
Confidence 445999999999999998743 11 26889999999999998 4668888887 9999999996432
Q ss_pred ------cccccccccccccceEEeecCCce-eec--cCcEEEeecCCC--cEEEEeecccccccccCCCCCcccccccCC
Q 000399 1365 ------CVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1566)
Q Consensus 1365 ------~i~tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg--~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~ 1433 (1566)
....+.+|++.|+.++|++....+ +|+ |+.+.|||+|++ ++...
T Consensus 213 ~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~------------------------- 267 (422)
T KOG0264|consen 213 EDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHS------------------------- 267 (422)
T ss_pred CCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccc-------------------------
Confidence 234579999999999999988765 555 999999999964 22222
Q ss_pred CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCC
Q 000399 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGS 1512 (1566)
Q Consensus 1434 ~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~ 1512 (1566)
..+|+..|+|++|+|. ++.+|+|||.|++|++||+|+. ++++++.+| ...|.+|.|+|.
T Consensus 268 -----~~ah~~~vn~~~fnp~---------~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H------~dev~~V~WSPh 327 (422)
T KOG0264|consen 268 -----VKAHSAEVNCVAFNPF---------NEFILATGSADKTVALWDLRNLNKPLHTFEGH------EDEVFQVEWSPH 327 (422)
T ss_pred -----ccccCCceeEEEeCCC---------CCceEEeccCCCcEEEeechhcccCceeccCC------CcceEEEEeCCC
Confidence 2346788999999997 4789999999999999999985 577888876 556788889887
Q ss_pred CcccCCCcccchhHHHhccCCCceeEEeeccCc--------------eeEEeeccCceeeEeeeecc
Q 000399 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--------------VIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1513 ~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk--------------~l~~l~gH~~~V~~Vafspd 1565 (1566)
.. ..|||++.|+.+.+||+..-. ++..-.||...|....|+|+
T Consensus 328 ~e----------tvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ 384 (422)
T KOG0264|consen 328 NE----------TVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPN 384 (422)
T ss_pred CC----------ceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCC
Confidence 65 478999999999999987422 24555699999999999986
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.2e-18 Score=195.57 Aligned_cols=211 Identities=16% Similarity=0.209 Sum_probs=169.2
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccccccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS 1367 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~ 1367 (1566)
|||...+ +|.+|+| ..+.+|+..+. ...++.-....|.++.|..||.++++|.. .|.|+|+|+.+...++
T Consensus 34 fsp~~P~---d~aVt~S--~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~----sG~V~vfD~k~r~iLR 104 (487)
T KOG0310|consen 34 FSPKHPY---DFAVTSS--VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDE----SGHVKVFDMKSRVILR 104 (487)
T ss_pred cCCCCCC---ceEEecc--cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCC----cCcEEEeccccHHHHH
Confidence 7775554 5566766 56888887765 56667778899999999999999999998 8999999987777789
Q ss_pred ccccccccccceEEeecCCce-eec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCccccc
Q 000399 1368 GYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1444 (1566)
Q Consensus 1368 tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1444 (1566)
.+.+|+.+|..+.|+|.++.+ ++| |+.+++||+.++.....+.+| +.
T Consensus 105 ~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~h------------------------------tD 154 (487)
T KOG0310|consen 105 QLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGH------------------------------TD 154 (487)
T ss_pred HHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCC------------------------------cc
Confidence 999999999999999998865 666 788999999988865455554 66
Q ss_pred ccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccc
Q 000399 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1445 ~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spd 1523 (1566)
.|.+.+++|.. +.+++|||.||+||+||+++. ..+.++. |..+|..|++- |.
T Consensus 155 YVR~g~~~~~~---------~hivvtGsYDg~vrl~DtR~~~~~v~eln-------hg~pVe~vl~l-----------ps 207 (487)
T KOG0310|consen 155 YVRCGDISPAN---------DHIVVTGSYDGKVRLWDTRSLTSRVVELN-------HGCPVESVLAL-----------PS 207 (487)
T ss_pred eeEeeccccCC---------CeEEEecCCCceEEEEEeccCCceeEEec-------CCCceeeEEEc-----------CC
Confidence 68888998863 568999999999999999986 5665554 56677777775 44
Q ss_pred hhHHHhccCCCceeEEeeccCce-eEEeeccCceeeEeeeeccC
Q 000399 1524 PSWIAAGLSSGQCRLFDVRSGNV-IASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1524 g~~LaSGs~Dg~I~lWD~~sgk~-l~~l~gH~~~V~~VafspdG 1566 (1566)
|..||+++.. .|++||+.+|.. +.....|...|+|+++..++
T Consensus 208 gs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~ 250 (487)
T KOG0310|consen 208 GSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDS 250 (487)
T ss_pred CCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEEeecCC
Confidence 5678888866 599999996654 44445599999999998754
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.9e-19 Score=203.77 Aligned_cols=207 Identities=18% Similarity=0.155 Sum_probs=154.6
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 237 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNI 237 (1566)
.+...|..+++||+|+|++||++.+.. .......||+|.+....... .. .+|+++|..+. +.||
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~---~~~~~~~valk~i~~ts~p~----ri--------~~El~~L~~~gG~~ni 97 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIE---QDTKRRYVALKAIYRTSSPS----RI--------LNELEMLYRLGGSDNI 97 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhh---hccccceEeeeecccccCch----HH--------HHHHHHHHHhccchhh
Confidence 345679999999999999999999742 12267889999987643221 12 26899998884 8999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+.+.+++..++...+||||++. +..+++.. ++...++.|++.++.||.++|.+|||||||||+|+|.+.... +
T Consensus 98 ~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~-r 171 (418)
T KOG1167|consen 98 IKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQ-R 171 (418)
T ss_pred hcchhhhccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccC-C
Confidence 9999999999999999999998 77777762 467889999999999999999999999999999999998763 6
Q ss_pred hhhcCcCCCCcccccc------c----cCCC-----------------CCCce------eeeecCCcccccccccccccc
Q 000399 317 LYICDKPLVGFNSIAD------W----CTIP-----------------TSPMI------GCCIEGCSSQGLYADLKLSQS 363 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~------~----~~~~-----------------~~~~~------~~~~~~~~gt~~Y~APE~l~~ 363 (1566)
-.|+|||+|....... . .... .+... ......-.||+.|+|||++..
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 7899999997211100 0 0000 00000 001233469999999998865
Q ss_pred cc-hhhccccccccccCCchhhhHHHhhccc
Q 000399 364 MD-WHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 364 ~~-y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+ -+..+|+|+.|+| .|-.+++|
T Consensus 252 ~~~QttaiDiws~GVI-------~Lslls~~ 275 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVI-------LLSLLSRR 275 (418)
T ss_pred ccCcCCccceeeccce-------eehhhccc
Confidence 44 4568999999999 55555543
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.3e-18 Score=225.98 Aligned_cols=215 Identities=11% Similarity=0.129 Sum_probs=161.1
Q ss_pred cccccCccCCCCceEeee-eehhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEecccccccccccccccccc
Q 000399 1301 LGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1566)
Q Consensus 1301 LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~s 1378 (1566)
|++|+.|++|++||+.++ .+..+.+|.+.|++++|+| ++.+|+|||. |++|++||+.++.++.++..| ..|.+
T Consensus 548 las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~----Dg~v~iWd~~~~~~~~~~~~~-~~v~~ 622 (793)
T PLN00181 548 VASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSD----DGSVKLWSINQGVSIGTIKTK-ANICC 622 (793)
T ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcC----CCEEEEEECCCCcEEEEEecC-CCeEE
Confidence 999999999999999865 6778899999999999997 7899999998 999999999999998888755 67899
Q ss_pred eEEee-cCCceeec--cCcEEEeecCCCc-EEEEeeccccc----------ccccCCCCCcccccccCCC-------CCC
Q 000399 1379 ICVLS-SSGRIASC--DGTLHVWNSQTGK-LLSVFAEQSMD----------SLHGGSPSSSISKINTDQV-------GML 1437 (1566)
Q Consensus 1379 Vafsp-~g~~LaSg--DgtIkLWDl~tg~-~l~~l~~h~~~----------~~~~~~~~~~~~~~~~~~~-------~~~ 1437 (1566)
++|++ ++..+++| ||+|++||+++++ .+.++.+|... .+.+++.++.+.+|+.... ...
T Consensus 623 v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~ 702 (793)
T PLN00181 623 VQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLH 702 (793)
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceE
Confidence 99965 57777766 9999999998765 45556555432 2334444556667765421 122
Q ss_pred CCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCc-c------cCchhhHHHhhcc
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT-E------LGFPSLVSAICAC 1510 (1566)
Q Consensus 1438 ~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~-~------v~~~~~V~sv~~s 1510 (1566)
.+.+|...+.+++|+++ ++++++|+.|++|++||......+..+..... . ..+...|.+++
T Consensus 703 ~~~gh~~~i~~v~~s~~----------~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~-- 770 (793)
T PLN00181 703 SFMGHTNVKNFVGLSVS----------DGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVC-- 770 (793)
T ss_pred EEcCCCCCeeEEEEcCC----------CCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEE--
Confidence 34456666777777765 88999999999999999887765544432111 0 01223344444
Q ss_pred CCCcccCCCcccchhHHHhccCCCceeEEee
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1511 ~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~ 1541 (1566)
+++++..|++|+.||.|++||+
T Consensus 771 ---------ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 771 ---------WRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred ---------EcCCCCeEEEecCCCcEEEEec
Confidence 4567789999999999999996
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.9e-18 Score=197.29 Aligned_cols=241 Identities=17% Similarity=0.137 Sum_probs=173.4
Q ss_pred cccCCCCcccccccccccccccccchHHHHHH-----hhccccCCCceeccCCCCCCCCCcccccccCccCCCCceEeee
Q 000399 1244 IPQSQGSRSSKNLIPQRRVYDYHKSSVERQEA-----TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS 1318 (1566)
Q Consensus 1244 ~~~~~~~~~~~~~i~~~~~~~le~~~~~~~~~-----~~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~ 1318 (1566)
+||......++..-...-+++....++..... ......|+..-..++.+-.. ...|++||.|++|++||+.+.
T Consensus 133 mPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~--~g~Lls~~~d~~i~lwdi~~~ 210 (422)
T KOG0264|consen 133 MPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQ--EGTLLSGSDDHTICLWDINAE 210 (422)
T ss_pred CCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccccccccccccc--ceeEeeccCCCcEEEEecccc
Confidence 46666655544444444555554333332211 11233454432222222111 122999999999999999853
Q ss_pred --------eehhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEec--ccccccccccccccccceEEeecCCc
Q 000399 1319 --------ILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELT--RINCVSGYYGHEEVVNDICVLSSSGR 1387 (1566)
Q Consensus 1319 --------~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~--tg~~i~tl~gH~~~V~sVafsp~g~~ 1387 (1566)
....+.+|+..|.+++|++ +..+|+|++. |+.+.|||++ +.++.....+|.+.|+|++|+|-+..
T Consensus 211 ~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~d----d~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ 286 (422)
T KOG0264|consen 211 SKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGD----DGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEF 286 (422)
T ss_pred ccCCccccceEEeecCCcceehhhccccchhhheeecC----CCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCc
Confidence 3457789999999999999 6778888887 9999999999 56777888999999999999999887
Q ss_pred e-eec--cCcEEEeecCC-CcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhh
Q 000399 1388 I-ASC--DGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE 1463 (1566)
Q Consensus 1388 L-aSg--DgtIkLWDl~t-g~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~p 1463 (1566)
+ |+| |++|.|||+|+ .+++.++.+| ...|.+|.|+|+.
T Consensus 287 ilAT~S~D~tV~LwDlRnL~~~lh~~e~H------------------------------~dev~~V~WSPh~-------- 328 (422)
T KOG0264|consen 287 ILATGSADKTVALWDLRNLNKPLHTFEGH------------------------------EDEVFQVEWSPHN-------- 328 (422)
T ss_pred eEEeccCCCcEEEeechhcccCceeccCC------------------------------CcceEEEEeCCCC--------
Confidence 6 665 99999999995 4555555554 6679999999984
Q ss_pred ccceEEEEecCceEEEEEccCCceeee-----------eccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccC
Q 000399 1464 CVERLVVGIGNGSLRFIDINQGQKLHL-----------WRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1566)
Q Consensus 1464 dg~~L~sgs~DgtIrlWDi~tg~~l~~-----------~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~ 1532 (1566)
...|++++.|+++.+||+..-..... +-.| .+|...|..+.++|...+ .|+|.+.
T Consensus 329 -etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~H---gGH~~kV~DfsWnp~ePW----------~I~Svae 394 (422)
T KOG0264|consen 329 -ETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIH---GGHTAKVSDFSWNPNEPW----------TIASVAE 394 (422)
T ss_pred -CceeEecccCCcEEEEeccccccccChhhhccCCcceeEEe---cCcccccccccCCCCCCe----------EEEEecC
Confidence 67899999999999999975221111 0112 146788999999988754 7889999
Q ss_pred CCceeEEeec
Q 000399 1533 SGQCRLFDVR 1542 (1566)
Q Consensus 1533 Dg~I~lWD~~ 1542 (1566)
|+.+.||...
T Consensus 395 DN~LqIW~~s 404 (422)
T KOG0264|consen 395 DNILQIWQMA 404 (422)
T ss_pred CceEEEeecc
Confidence 9999999975
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.6e-17 Score=173.83 Aligned_cols=224 Identities=16% Similarity=0.201 Sum_probs=179.5
Q ss_pred CCCceec--cCCCCCCCCCcccccccCccCCCCceEe--e----eeehhhhhccCcceeeeecCc----ceEEEeeccCC
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--A----SILSSIRAHHGALRSVAVGQD----ECTVFTAGIGP 1349 (1566)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~--~----~~l~tl~gH~~~V~slafspd----~~~LaSgS~~~ 1349 (1566)
|.+.++| +||+|.+ |++||.|++|++.-.+ + +.-..+..|.+.|++++|..| +..++|++.+
T Consensus 88 hkgsiyc~~ws~~gel-----iatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gag- 161 (350)
T KOG0641|consen 88 HKGSIYCTAWSPCGEL-----IATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG- 161 (350)
T ss_pred cCccEEEEEecCccCe-----EEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCC-
Confidence 6677777 8999998 9999999999876443 3 234567789999999999764 6789999874
Q ss_pred CcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccc
Q 000399 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1350 ~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~ 1427 (1566)
|..|.+-|-.+|+....+.||++-|.++- +-.+-.++|| |.+|++||++-..++.++...... .
T Consensus 162 --dc~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~----~------- 227 (350)
T KOG0641|consen 162 --DCKIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHD----G------- 227 (350)
T ss_pred --cceEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccC----C-------
Confidence 88888888889999999999999998874 7778888988 999999999999999887542100 0
Q ss_pred ccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHh
Q 000399 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1566)
Q Consensus 1428 ~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv 1507 (1566)
--.++.|.+++.+|. |+++++|..|.+..+||++-|+.+..|..| +..|++|
T Consensus 228 ------------glessavaav~vdps----------grll~sg~~dssc~lydirg~r~iq~f~ph------sadir~v 279 (350)
T KOG0641|consen 228 ------------GLESSAVAAVAVDPS----------GRLLASGHADSSCMLYDIRGGRMIQRFHPH------SADIRCV 279 (350)
T ss_pred ------------CcccceeEEEEECCC----------cceeeeccCCCceEEEEeeCCceeeeeCCC------ccceeEE
Confidence 001345677777776 999999999999999999999999999876 5567888
Q ss_pred hccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc-----eeEEeeccCceeeEeeeecc
Q 000399 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-----VIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1508 ~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk-----~l~~l~gH~~~V~~Vafspd 1565 (1566)
.|+|. ..++.+||.|..|++-|+. |. .+-....|...+..+.|+|.
T Consensus 280 rfsp~-----------a~yllt~syd~~ikltdlq-gdla~el~~~vv~ehkdk~i~~rwh~~ 330 (350)
T KOG0641|consen 280 RFSPG-----------AHYLLTCSYDMKIKLTDLQ-GDLAHELPIMVVAEHKDKAIQCRWHPQ 330 (350)
T ss_pred EeCCC-----------ceEEEEecccceEEEeecc-cchhhcCceEEEEeccCceEEEEecCc
Confidence 87754 4689999999999999986 33 23344568888889999885
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.72 E-value=8.2e-18 Score=190.90 Aligned_cols=230 Identities=16% Similarity=0.192 Sum_probs=168.8
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeeehhhhh--ccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRA--HHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~g--H~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
+...|...|.. +|||.++ |+++|.|..+.+||+.++......+ |..++.+++|.|||..+++||. |+
T Consensus 264 tlvgh~~~V~yi~wSPDdry-----LlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~----dr 334 (519)
T KOG0293|consen 264 TLVGHSQPVSYIMWSPDDRY-----LLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSP----DR 334 (519)
T ss_pred eeecccCceEEEEECCCCCe-----EEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCC----CC
Confidence 45567777776 8999999 9999999999999999995555443 4589999999999999999999 99
Q ss_pred ceeeEEeccccccccccccc-ccccceEEeecCCcee-ec-cCcEEEeecCCCcEEEEeecccccccccCCC--------
Q 000399 1354 TVQKWELTRINCVSGYYGHE-EVVNDICVLSSSGRIA-SC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP-------- 1422 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~-~~V~sVafsp~g~~La-Sg-DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~-------- 1422 (1566)
++..||+. |+.....+|-. ..|.+++.+++|++++ ++ |..|++++.++.........+......+.+.
T Consensus 335 ~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~Lvn 413 (519)
T KOG0293|consen 335 TIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVN 413 (519)
T ss_pred cEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEE
Confidence 99999986 34444454432 4589999999999874 44 9999999998765554444433322122222
Q ss_pred --CCcccccccCCC-CCCCCcccccc--cccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcc
Q 000399 1423 --SSSISKINTDQV-GMLNSNTLSSG--ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTE 1497 (1566)
Q Consensus 1423 --~~~~~~~~~~~~-~~~~~~~~~~~--V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~ 1497 (1566)
+..+.+|+.... .+..+.+|..+ |-.-.|... +..++++||.|+.|++|+..+|+.+.++.||
T Consensus 414 L~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~---------~~~fiaSGSED~kvyIWhr~sgkll~~LsGH--- 481 (519)
T KOG0293|consen 414 LQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGG---------NDKFIASGSEDSKVYIWHRISGKLLAVLSGH--- 481 (519)
T ss_pred cccCeeEEeecchhhHHHHhhcccccceEEEeccCCC---------CcceEEecCCCceEEEEEccCCceeEeecCC---
Confidence 223344554322 22234444332 222233332 2579999999999999999999999999987
Q ss_pred cCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeec
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1498 v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
...|++|+++|.+ ...+||||+||+||||-..
T Consensus 482 ---s~~vNcVswNP~~----------p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 482 ---SKTVNCVSWNPAD----------PEMFASASDDGTIRIWGPS 513 (519)
T ss_pred ---cceeeEEecCCCC----------HHHhhccCCCCeEEEecCC
Confidence 5678999999865 3699999999999999765
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.3e-17 Score=205.47 Aligned_cols=185 Identities=19% Similarity=0.387 Sum_probs=151.5
Q ss_pred eehhhh-hccCcceeeeecCcceEEEeeccCCCcccceeeEEecc-----------------------------------
Q 000399 1319 ILSSIR-AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR----------------------------------- 1362 (1566)
Q Consensus 1319 ~l~tl~-gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~t----------------------------------- 1362 (1566)
..+.+. +|.++|+++.||+||.+|||||. |+.|+||.+..
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGe----D~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGE----DGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCC----CceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 345666 89999999999999999999998 99999998743
Q ss_pred -------------------------cccccccccccccccceEEeecCCceeec-cCcEEEeecCCCcEEEEeecccccc
Q 000399 1363 -------------------------INCVSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFAEQSMDS 1416 (1566)
Q Consensus 1363 -------------------------g~~i~tl~gH~~~V~sVafsp~g~~LaSg-DgtIkLWDl~tg~~l~~l~~h~~~~ 1416 (1566)
.++++.|.||.+.|.+|.|+..+-.|-|. |.|||||++....|+++|.
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~------ 407 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS------ 407 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe------
Confidence 02245578999999999999877666333 9999999999999999885
Q ss_pred cccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCc
Q 000399 1417 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496 (1566)
Q Consensus 1417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~ 1496 (1566)
|...|+||+|+|. |.+++++||-||.||||++...+.+ .|..-
T Consensus 408 -------------------------HndfVTcVaFnPv---------DDryFiSGSLD~KvRiWsI~d~~Vv-~W~Dl-- 450 (712)
T KOG0283|consen 408 -------------------------HNDFVTCVAFNPV---------DDRYFISGSLDGKVRLWSISDKKVV-DWNDL-- 450 (712)
T ss_pred -------------------------cCCeeEEEEeccc---------CCCcEeecccccceEEeecCcCeeE-eehhh--
Confidence 4667999999997 7899999999999999999855544 44432
Q ss_pred ccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeecc--------CceeeEeeeecc
Q 000399 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH--------DGYVTKVRIISK 1565 (1566)
Q Consensus 1497 ~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH--------~~~V~~Vafspd 1565 (1566)
...|+++|+. |||+..+.|+.+|.+++|+++..+....+.-+ ...|+++.|.|.
T Consensus 451 ----~~lITAvcy~-----------PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~ 512 (712)
T KOG0283|consen 451 ----RDLITAVCYS-----------PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPG 512 (712)
T ss_pred ----hhhheeEEec-----------cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCC
Confidence 4678888886 66678999999999999999988877665421 127999998763
|
|
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.2e-18 Score=203.44 Aligned_cols=198 Identities=16% Similarity=0.224 Sum_probs=169.8
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee--------eehhhh-----hccCcceeeeecCcceEEEe
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS--------ILSSIR-----AHHGALRSVAVGQDECTVFT 1344 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~--------~l~tl~-----gH~~~V~slafspd~~~LaS 1344 (1566)
.+|++.+|+ .+||+.. ++|||.|++|+.||.+-. .+.++. .-++.|.|+++|||+.+++.
T Consensus 451 ~AHdgaIWsi~~~pD~~g-----~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaV 525 (888)
T KOG0306|consen 451 RAHDGAIWSISLSPDNKG-----FVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAV 525 (888)
T ss_pred hccccceeeeeecCCCCc-----eEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEE
Confidence 369999999 6999998 999999999999997631 111111 24689999999999999999
Q ss_pred eccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCC
Q 000399 1345 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1566)
Q Consensus 1345 gS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~ 1422 (1566)
+-- |.||+||-+.+-+.--++.||.=+|.|+.++|+++.+++| |.+|++|-+.=|.|-+.+-.|
T Consensus 526 sLL----dnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAH---------- 591 (888)
T KOG0306|consen 526 SLL----DNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAH---------- 591 (888)
T ss_pred Eec----cCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcc----------
Confidence 998 9999999999999999999999999999999999999988 999999999999988766554
Q ss_pred CCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1423 ~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
...|.++.|-|. ...+.|+|.|+.|+-||.....++.++.+| ..
T Consensus 592 --------------------dDSvm~V~F~P~----------~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H------~~ 635 (888)
T KOG0306|consen 592 --------------------DDSVMSVQFLPK----------THLFFTCGKDGKVKQWDGEKFEEIQKLDGH------HS 635 (888)
T ss_pred --------------------cCceeEEEEccc----------ceeEEEecCcceEEeechhhhhhheeeccc------hh
Confidence 556888888886 678999999999999999999999999987 34
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeecc
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS 1543 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~s 1543 (1566)
.|+|++++ |+|.+++|+|.|.+|++|.-..
T Consensus 636 ev~cLav~-----------~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 636 EVWCLAVS-----------PNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred eeeeeEEc-----------CCCCeEEeccCCceeEeeeccC
Confidence 45666554 7778999999999999998543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-18 Score=215.17 Aligned_cols=197 Identities=18% Similarity=0.124 Sum_probs=147.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~ 239 (1566)
...|.+.+.||+|+|+.|-.+.... .....+|+|.+....... .+.. +.-.|..+-+.+. |+|++.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~-----~~~~~~a~~~~s~~~~~~----~~~~----~i~~e~~~~~~~s~h~n~~~ 85 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSR-----DPESSSATKPISIPPKSE----DSSE----HIDTETDIQKKLSKHSNTVH 85 (601)
T ss_pred cccccccccccccccchhhhhhhcC-----CCcceeeccCCCCCCCcc----chhh----hcCccccccccccccccccc
Confidence 3468889999999999999877531 345556666655432111 1111 1225777777776 999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHh-hccccCCCccCCCccccccchhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH-SLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH-~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
+++.....+..++++||..| ++.+.+........+...+.+++.|+..++.|+| ..++.||||||+|.+++..+. .+
T Consensus 86 ~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~-~l 164 (601)
T KOG0590|consen 86 MIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS-AL 164 (601)
T ss_pred cCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC-cc
Confidence 99999999999999999887 8888883222225677888999999999999999 999999999999999999884 59
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccch-hhcccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDW-HSQFNRWWRGEL 378 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y-~~~~d~Ws~G~i 378 (1566)
|++|||+|....... .........|+.++.|+|||...+..| ....|.|+.|.+
T Consensus 165 ~~~df~~At~~~~~~-------g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~ 219 (601)
T KOG0590|consen 165 KIADFGLATAYRNKN-------GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIV 219 (601)
T ss_pred cCCCchhhccccccC-------CcceeeecccCCCCCCCCcccccchhhcCCCccccccccc
Confidence 999999998654210 111112233334899999999998655 458899999987
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-18 Score=187.22 Aligned_cols=200 Identities=19% Similarity=0.142 Sum_probs=149.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccC-CCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH-PNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H-pNIV~ 239 (1566)
.++|+++++||.|+||.+|+|.. ..+|..||||+-......++ . ..|..+.+.|++ ..|..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~------i~~ge~VAiK~Es~~a~hpq----L--------~yEskvY~iL~~g~GiP~ 75 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGIS------ITSGEEVAIKLESSKAKHPQ----L--------LYESKVYRILQGGVGIPH 75 (341)
T ss_pred ccceEEEEeecCCchhheeeeee------ccCCceEEEEeecccCCCcc----h--------hHHHHHHHHhccCCCCch
Confidence 56899999999999999999886 47899999999654332222 2 258888888875 78888
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~vK 318 (1566)
+..++.+...-.+|||.++.+|+++...+.+ .++..++..++.|++.-++|+|.+++|||||||+|+|+.-+.. .++.
T Consensus 76 i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~ 154 (341)
T KOG1163|consen 76 IRHYGTEKDYNVLVMDLLGPSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLY 154 (341)
T ss_pred hhhhccccccceeeeeccCccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEE
Confidence 8889989999999999999999999987644 4799999999999999999999999999999999999875432 3789
Q ss_pred hcCcCCCCccccccc-cCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHh
Q 000399 319 ICDKPLVGFNSIADW-CTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~-~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
++|||+|+....... .+.+... .....||..|.+--...+.+-...-|.=+.|-+ ||++|.
T Consensus 155 LIDFGLaKky~d~~t~~HIpyre-----~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYv-----LmYfnr 216 (341)
T KOG1163|consen 155 LIDFGLAKKYRDIRTRQHIPYRE-----DRNLTGTARYASINAHLGIEQSRRDDMESVGYV-----LMYFNR 216 (341)
T ss_pred EEeccchhhhccccccccCcccc-----CCccceeeeehhhhhhhhhhhhhhhhhhhhcce-----eeeeec
Confidence 999999997654322 1111111 123348888877554444443444455555544 455554
|
|
| >KOG0646 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-17 Score=193.20 Aligned_cols=216 Identities=19% Similarity=0.279 Sum_probs=172.2
Q ss_pred Cceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEe
Q 000399 1284 PWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL 1360 (1566)
Q Consensus 1284 ~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl 1360 (1566)
+.|.+ -+|+|.| |+.|+--+.+.+|.+.+| .+..+.+|-.+|+++.|+.||.+|+|||+ ||.|.+|++
T Consensus 82 g~v~al~s~n~G~~-----l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgsk----Dg~V~vW~l 152 (476)
T KOG0646|consen 82 GPVHALASSNLGYF-----LLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSK----DGAVLVWLL 152 (476)
T ss_pred cceeeeecCCCceE-----EEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCC----CccEEEEEE
Confidence 44555 4888998 888878899999999988 67788999999999999999999999999 999999998
Q ss_pred c---------ccccccccccccccccceEEeecCC--cee--eccCcEEEeecCCCcEEEEeecccccccccCCCCCccc
Q 000399 1361 T---------RINCVSGYYGHEEVVNDICVLSSSG--RIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1361 ~---------tg~~i~tl~gH~~~V~sVafsp~g~--~La--SgDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~ 1427 (1566)
. +-++.+.+.+|+-+|+++...+.|. ++. |-|.+||+||+..|..+.++...
T Consensus 153 ~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp--------------- 217 (476)
T KOG0646|consen 153 TDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFP--------------- 217 (476)
T ss_pred EeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecC---------------
Confidence 4 3367788999999999998766543 454 34999999999999988876542
Q ss_pred ccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCc----------------eeeee
Q 000399 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ----------------KLHLW 1491 (1566)
Q Consensus 1428 ~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~----------------~l~~~ 1491 (1566)
..+.+++.+|. ++.+..|+.+|.|.+.++.... .+..+
T Consensus 218 ----------------~si~av~lDpa----------e~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~ 271 (476)
T KOG0646|consen 218 ----------------SSIKAVALDPA----------ERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVL 271 (476)
T ss_pred ----------------CcceeEEEccc----------ccEEEecCCcceEEeeehhcCCcccccccccccccccceeeee
Confidence 33556666665 8899999999999998876432 22333
Q ss_pred ccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
.||.+ ...|+|++++ .||.+|++|+.||.|++||+.+.++++++....++|+.+.+.|
T Consensus 272 ~Gh~~----~~~ITcLais-----------~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~ 329 (476)
T KOG0646|consen 272 VGHEN----ESAITCLAIS-----------TDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINP 329 (476)
T ss_pred ccccC----CcceeEEEEe-----------cCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeec
Confidence 33321 1256666654 6778999999999999999999999999986788999998854
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.1e-18 Score=183.68 Aligned_cols=222 Identities=11% Similarity=0.056 Sum_probs=166.3
Q ss_pred cccccccccccccccchHHHHHHhhccccCCCceeccCCCCCCCCCcccccccCccCCCCceEee-eeehhhhhccCcce
Q 000399 1253 SKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALR 1331 (1566)
Q Consensus 1253 ~~~~i~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~-~~l~tl~gH~~~V~ 1331 (1566)
++++ .-+++++.......+.- ..|...|.+...+..+ -+.++++|+|++|++|+..- +.+.++.||..-|.
T Consensus 80 ~GDG--SLrl~d~~~~s~Pi~~~----kEH~~EV~Svdwn~~~--r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy 151 (311)
T KOG0277|consen 80 SGDG--SLRLFDLTMPSKPIHKF----KEHKREVYSVDWNTVR--RRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIY 151 (311)
T ss_pred ecCc--eEEEeccCCCCcchhHH----HhhhhheEEecccccc--ceeEEeeccCCceEeecCCCCcceEeecCCccEEE
Confidence 4444 33466654333333322 2477788775444332 22377889999999999875 47899999999999
Q ss_pred eeeecC-cceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCce-eec--cCcEEEeecCCC-cEE
Q 000399 1332 SVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTG-KLL 1406 (1566)
Q Consensus 1332 slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg-~~l 1406 (1566)
..+|+| ..+.|+++|. |++.++||++.......+..|...+.|+.|+.-...+ +++ |+.|++||+++- .++
T Consensus 152 ~a~~sp~~~nlfas~Sg----d~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl 227 (311)
T KOG0277|consen 152 QAAFSPHIPNLFASASG----DGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPL 227 (311)
T ss_pred EEecCCCCCCeEEEccC----CceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccc
Confidence 999999 6789999998 9999999997543333488999999999999887765 666 999999999863 334
Q ss_pred EEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-
Q 000399 1407 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG- 1485 (1566)
Q Consensus 1407 ~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg- 1485 (1566)
..+ .+|+-.|..++|+|.. ...|++++.|=++||||...+
T Consensus 228 ~eL------------------------------~gh~~AVRkvk~Sph~---------~~lLaSasYDmT~riw~~~~~d 268 (311)
T KOG0277|consen 228 FEL------------------------------NGHGLAVRKVKFSPHH---------ASLLASASYDMTVRIWDPERQD 268 (311)
T ss_pred eee------------------------------cCCceEEEEEecCcch---------hhHhhhccccceEEecccccch
Confidence 433 3457779999999973 568999999999999999854
Q ss_pred ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEee
Q 000399 1486 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1486 ~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~ 1541 (1566)
.++.+... |+..|..+.++.- ++.++|+++.|+.++||+-
T Consensus 269 s~~e~~~~------HtEFv~g~Dws~~----------~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 269 SAIETVDH------HTEFVCGLDWSLF----------DPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hhhhhhhc------cceEEeccccccc----------cCceeeecccccceeeecc
Confidence 34444443 4667777777643 3469999999999999983
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1566 | ||||
| 1mi1_A | 414 | Crystal Structure Of The Ph-Beach Domain Of Human N | 2e-25 | ||
| 1t77_A | 414 | Crystal Structure Of The Ph-Beach Domains Of Human | 7e-22 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 3e-06 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 1e-05 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-05 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-05 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-05 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 2e-05 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 2e-05 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-05 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 2e-05 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 2e-05 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 2e-05 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 3e-05 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 3e-05 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 3e-05 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 3e-05 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 3e-05 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 3e-05 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 3e-05 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 3e-05 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-05 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 3e-05 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 3e-05 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 3e-05 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 3e-05 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 3e-05 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 5e-05 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 5e-05 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 5e-05 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 5e-05 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 5e-05 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 5e-05 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-05 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 5e-05 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 5e-05 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 5e-05 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 5e-05 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 5e-05 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 5e-05 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 5e-05 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 5e-05 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 5e-05 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 5e-05 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 6e-05 | ||
| 3juh_A | 335 | Crystal Structure Of A Mutant Of Human Protein Kina | 7e-05 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 7e-05 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 1e-04 | ||
| 3u87_A | 349 | Structure Of A Chimeric Construct Of Human Ck2alpha | 1e-04 | ||
| 1na7_A | 329 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-04 | ||
| 1pjk_A | 334 | Crystal Structure Of A C-terminal Deletion Mutant O | 1e-04 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 1e-04 | ||
| 3q9w_A | 336 | Crystal Structure Of Human Ck2 Alpha In Complex Wit | 1e-04 | ||
| 3q04_A | 328 | Crystal Structure Of The Apo-Form Of Human Ck2 Alph | 1e-04 | ||
| 3nsz_A | 330 | Human Ck2 Catalytic Domain In Complex With Amppn Le | 1e-04 | ||
| 3nga_A | 333 | Human Ck2 Catalytic Domain In Complex With Cx-4945 | 1e-04 | ||
| 3mb6_A | 331 | Human Ck2 Catalytic Domain In Complex With A Difura | 1e-04 | ||
| 3h30_A | 334 | Crystal Structure Of The Catalytic Subunit Of Human | 1e-04 | ||
| 2zjw_A | 340 | Crystal Structure Of Human Ck2 Alpha Complexed With | 1e-04 | ||
| 2r7i_A | 335 | Crystal Structure Of Catalytic Subunit Of Protein K | 1e-04 | ||
| 3bqc_A | 335 | High Ph-Value Crystal Structure Of Emodin In Comple | 1e-04 | ||
| 1jwh_A | 337 | Crystal Structure Of Human Protein Kinase Ck2 Holoe | 1e-04 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 1e-04 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 1e-04 | ||
| 3ofm_A | 350 | Structure Of A Human Ck2alpha Prime, The Paralog Is | 1e-04 | ||
| 3e3b_X | 339 | Crystal Structure Of Catalytic Subunit Of Human Pro | 1e-04 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 1e-04 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-04 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-04 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-04 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-04 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-04 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 2e-04 | ||
| 4anm_A | 335 | Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | 2e-04 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 2e-04 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 2e-04 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 2e-04 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 2e-04 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 2e-04 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-04 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 2e-04 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 2e-04 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 2e-04 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 2e-04 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 2e-04 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 2e-04 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 2e-04 | ||
| 1ds5_A | 332 | Dimeric Crystal Structure Of The Alpha Subunit In C | 2e-04 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 2e-04 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-04 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 2e-04 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-04 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 2e-04 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 2e-04 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 2e-04 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 2e-04 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 2e-04 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 2e-04 | ||
| 1daw_A | 327 | Crystal Structure Of A Binary Complex Of Protein Ki | 2e-04 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 2e-04 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 2e-04 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-04 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 2e-04 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 2e-04 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 2e-04 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 2e-04 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-04 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 2e-04 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-04 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 3e-04 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 3e-04 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 3e-04 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-04 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-04 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 3e-04 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 3e-04 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 3e-04 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-04 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 3e-04 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 3e-04 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-04 | ||
| 2pvh_A | 352 | Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri | 3e-04 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 3e-04 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 3e-04 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-04 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 3e-04 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 3e-04 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 3e-04 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 3e-04 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 3e-04 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 4e-04 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-04 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 4e-04 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 4e-04 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 4e-04 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 4e-04 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 4e-04 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-04 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 4e-04 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 4e-04 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 5e-04 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 5e-04 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 5e-04 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 6e-04 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 7e-04 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 7e-04 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 7e-04 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 7e-04 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 7e-04 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 8e-04 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 8e-04 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 8e-04 | ||
| 1m2p_A | 325 | Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra | 9e-04 | ||
| 4dgn_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 9e-04 | ||
| 4dgm_A | 326 | Crystal Structure Of Maize Ck2 In Complex With The | 9e-04 | ||
| 3pvg_A | 331 | Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C | 9e-04 | ||
| 3kxg_A | 327 | Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun | 9e-04 | ||
| 2qc6_A | 332 | Protein Kinase Ck2 In Complex With Dbc Length = 332 | 9e-04 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 9e-04 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 9e-04 |
| >pdb|1MI1|A Chain A, Crystal Structure Of The Ph-Beach Domain Of Human Neurobeachin Length = 414 | Back alignment and structure |
|
| >pdb|1T77|A Chain A, Crystal Structure Of The Ph-Beach Domains Of Human LrbaBGL Length = 414 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349 | Back alignment and structure |
|
| >pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329 | Back alignment and structure |
|
| >pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336 | Back alignment and structure |
|
| >pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328 | Back alignment and structure |
|
| >pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330 | Back alignment and structure |
|
| >pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333 | Back alignment and structure |
|
| >pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331 | Back alignment and structure |
|
| >pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334 | Back alignment and structure |
|
| >pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340 | Back alignment and structure |
|
| >pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335 | Back alignment and structure |
|
| >pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350 | Back alignment and structure |
|
| >pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325 | Back alignment and structure |
|
| >pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326 | Back alignment and structure |
|
| >pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326 | Back alignment and structure |
|
| >pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331 | Back alignment and structure |
|
| >pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327 | Back alignment and structure |
|
| >pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1566 | ||||
| d1t77a1 | 304 | a.169.1.1 (A:2186-2489) Lipopolysaccharide-respons | 2e-67 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-12 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-07 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-11 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 4e-06 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-10 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-07 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-10 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-06 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-10 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-06 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 3e-10 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 1e-07 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-10 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-07 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 8e-10 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 7e-08 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 5e-05 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-09 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 3e-07 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 3e-09 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 2e-04 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 3e-09 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 0.002 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-09 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 3e-09 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-04 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 4e-09 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-04 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 4e-09 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 0.003 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 4e-09 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 0.001 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-09 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 4e-07 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 5e-09 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 8e-09 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 0.003 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 9e-09 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 0.004 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-08 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 8e-05 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 2e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 3e-05 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-08 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-04 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-08 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 4e-08 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-08 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-06 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 1e-07 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 9e-06 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 1e-07 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-07 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 5e-06 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-07 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-05 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-05 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-07 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 0.003 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-07 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-07 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 3e-06 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 4e-07 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 4e-07 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 4e-07 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 7e-04 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-07 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 8e-04 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-06 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-06 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-04 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-06 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 8e-04 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 1e-06 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-04 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 2e-06 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-05 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-06 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-06 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-06 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-06 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-04 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-06 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 4e-06 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-04 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 5e-06 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 6e-06 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 2e-05 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 7e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-05 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 8e-06 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-04 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 9e-06 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 0.001 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 9e-06 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 0.003 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 1e-05 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-05 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-04 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-05 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-04 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 4e-05 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 0.001 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 9e-05 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 3e-04 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 4e-04 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 5e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 7e-04 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 9e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 0.001 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.004 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 0.004 |
| >d1t77a1 a.169.1.1 (A:2186-2489) Lipopolysaccharide-responsive and beige-like anchor protein LRBA {Human (Homo sapiens) [TaxId: 9606]} Length = 304 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: BEACH domain superfamily: BEACH domain family: BEACH domain domain: Lipopolysaccharide-responsive and beige-like anchor protein LRBA species: Human (Homo sapiens) [TaxId: 9606]
Score = 228 bits (582), Expect = 2e-67
Identities = 81/277 (29%), Positives = 124/277 (44%), Gaps = 45/277 (16%)
Query: 371 NRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF--STKPDENFDSGSRDLSKS 428
RW E+SNFEYL+FLN +AGR + D + V PWVI S + D + RDLSK
Sbjct: 28 QRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKP 87
Query: 429 -----KWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY 483
R A E+ + H + V ++ R P + ++
Sbjct: 88 IGALNPKRAAFFAERYESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGK 147
Query: 484 --EPNEYPSTMQRLYQWT------PDECIPEFYCDPQIFYSQHP----------GMTDLA 525
+ S++ R ++ + E IPEFY P++F + + ++D+
Sbjct: 148 FDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVE 207
Query: 526 VPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEP-- 583
+PPWA + EEF+ ++R ALES+ VS ++H WID+ FGYK G A+ A NV +
Sbjct: 208 LPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTYEGA 267
Query: 584 ----------------TKPKSVGR--LQLFTQPHPVR 602
+ +S G+ QL +PHP R
Sbjct: 268 VNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 304
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.9 bits (163), Expect = 3e-12
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 10/117 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
S +E ++++ E + HPN+ +L + +I +
Sbjct: 47 TKSEEELEDYMV--------EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDA 98
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ +E ++ + Q L A+ YLH I HR + N+L T + + D
Sbjct: 99 VMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG--DIKLAD 153
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (124), Expect = 2e-07
Identities = 17/103 (16%), Positives = 41/103 (39%), Gaps = 7/103 (6%)
Query: 714 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---N 770
G+ + + ++S + + D++S+G L E+ P ++ L
Sbjct: 172 GTPYWMAPEVVMCETSKDRPYDYKA--DVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 229
Query: 771 GDLPGV--MEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+ P + S+ + ++ C+ K+ R + LL+ P+
Sbjct: 230 SEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFV 272
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.3 bits (156), Expect = 3e-11
Identities = 33/201 (16%), Positives = 61/201 (30%), Gaps = 18/201 (8%)
Query: 232 LRHPNVAPVLGLLKTSG-------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
+ P++ ++ + + ++ + L + +Q + +E +M
Sbjct: 62 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG--ELFSRIQDRGDQAFTEREASEIMKS 119
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 344
+ AI YLHS+ IAHR V P N+L T + + A T S C
Sbjct: 120 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL-----TDFGFAKETTSHNSLTTPC 174
Query: 345 CIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVM 404
+ + K +S D S + L + N G +
Sbjct: 175 YTPYYVAPEVLGPEKYDKSCDMWSLGVIMY--ILLCGYPPFYSNH--GLAISPGMKTRIR 230
Query: 405 PWVIDFSTKPDENFDSGSRDL 425
+F + L
Sbjct: 231 MGQYEFPNPEWSEVSEEVKML 251
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 4e-06
Identities = 15/85 (17%), Positives = 34/85 (40%), Gaps = 10/85 (11%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDS---------ISLAVYLENGDLPG-VMEELPSHTRI 786
D S D++S+G ++ L P F S + + + + P E+ ++
Sbjct: 191 DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKM 250
Query: 787 LVEACITKDWTRRPSAKSLLESPYF 811
L+ + + T+R + + P+
Sbjct: 251 LIRNLLKTEPTQRMTITEFMNHPWI 275
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 62.3 bits (151), Expect = 1e-10
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 200 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 259
+ GK S ++ ++ ++ E LRHPN G V+
Sbjct: 48 MSYSGKQSNEKWQDIIK--------EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG 99
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319
+ ++L+ L E + + + L +AYLHS + HR V N+LL++ + +
Sbjct: 100 SASDLLEVHKKPL-QEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156
Query: 320 CD 321
D
Sbjct: 157 GD 158
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.5 bits (123), Expect = 4e-07
Identities = 21/104 (20%), Positives = 43/104 (41%), Gaps = 12/104 (11%)
Query: 714 GSMEYQ--ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL--- 768
G+ + E++L + Y D++S+G EL R+P +++ L
Sbjct: 173 GTPYWMAPEVILAMDEGQYDGKV------DVWSLGITCIELAERKPPLFNMNAMSALYHI 226
Query: 769 -ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+N + R V++C+ K RP+++ LL+ +
Sbjct: 227 AQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 62.0 bits (150), Expect = 2e-10
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 10/118 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLEN 263
+ E S+ L HP + + + + ++ L +
Sbjct: 64 TPYPLDKYTVKN--------EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD 115
Query: 264 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ + SE V M Q + ++H I H + P N++ S + I D
Sbjct: 116 RIAAEDYKM-SEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIID 172
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 48.5 bits (115), Expect = 4e-06
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN---GDL---PGVMEELPSHTRILVEA 790
D+++IG L L F L+N D + + ++
Sbjct: 206 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 265
Query: 791 CITKDWTRRPSAKSLLESPYF 811
+ K+ +R + LE P+
Sbjct: 266 LLQKEPRKRLTVHDALEHPWL 286
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 61.6 bits (149), Expect = 2e-10
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
LRHP + + + + + L + N + SE M Q+ +
Sbjct: 80 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMRQVCKGLC 138
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
++H H + P N++ T + L + D
Sbjct: 139 HMHENNYVHLDLKPENIMFTTKRSNELKLID 169
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 49.3 bits (117), Expect = 2e-06
Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLAVYLEN-----GDLPG-VMEELPSHTRILVEACITK 794
D++S+G L L F + L N ++ + + + +
Sbjct: 207 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLA 266
Query: 795 DWTRRPSAKSLLESPYF 811
D R + LE P+
Sbjct: 267 DPNTRMTIHQALEHPWL 283
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.8 bits (147), Expect = 3e-10
Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E + LRHPN+ + G + + ++ P + E + +
Sbjct: 56 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITE 114
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
L +A++Y HS + HR + P N+LL + L I D
Sbjct: 115 LANALSYCHSKRVIHRDIKPENLLLGSAG--ELKIAD 149
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.3 bits (125), Expect = 1e-07
Identities = 15/77 (19%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN--GDLPGVMEELPSHTRILVEACITK 794
D D++S+G L E + +P F++ + + + + R L+ +
Sbjct: 182 DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKH 241
Query: 795 DWTRRPSAKSLLESPYF 811
+ ++RP + +LE P+
Sbjct: 242 NPSQRPMLREVLEHPWI 258
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.2 bits (148), Expect = 3e-10
Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 10/118 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTP-YTLEN 263
K G + + E S+ RH N+ + ++ + + +
Sbjct: 39 KVKGTDQVLVKK--------EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE 90
Query: 264 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ S L +E + ++Q+ A+ +LHS I H + P N++ S + I +
Sbjct: 91 RINTSAFEL-NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIE 147
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.7 bits (126), Expect = 1e-07
Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 6/77 (7%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEACITK 794
D++S+G L+ L F + + +E N + +E+ V+ + K
Sbjct: 185 DMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVK 244
Query: 795 DWTRRPSAKSLLESPYF 811
+ R +A L+ P+
Sbjct: 245 ERKSRMTASEALQHPWL 261
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 8e-10
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
++ K + +N + E + L H NV G + + +
Sbjct: 38 VDMKRAVDCPENIKK--------EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 89
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ E + +QL++ + YLH +GI HR + P N+LL + L I D
Sbjct: 90 LFDRIEPDIGM-PEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKISD 146
Query: 322 KPL 324
L
Sbjct: 147 FGL 149
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 7e-08
Identities = 10/76 (13%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS-----LAVYLENGDLPGVMEELPSHTRILVEACITKD 795
D++S G +L + +D S + + E +++ S L+ + ++
Sbjct: 188 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVEN 247
Query: 796 WTRRPSAKSLLESPYF 811
+ R + + + ++
Sbjct: 248 PSARITIPDIKKDRWY 263
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.5 bits (141), Expect = 1e-09
Identities = 18/120 (15%), Positives = 42/120 (35%), Gaps = 10/120 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
K FL E+++ L+H + + ++ + +L +
Sbjct: 46 KQGSMSPDAFLA--------EANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDF 97
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324
L+ + + + Q+ +A++ HR + +N+L++D I D L
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD--TLSCKIADFGL 155
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (105), Expect = 5e-05
Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 6/91 (6%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 785
+ D++S G LL E + R + ++ + LE G + P
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY 240
Query: 786 ILVEACITKDWTRRPSAKSLLE--SPYFPST 814
L+ C + RP+ L +F +T
Sbjct: 241 QLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 58.5 bits (141), Expect = 1e-09
Identities = 22/95 (23%), Positives = 30/95 (31%), Gaps = 2/95 (2%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADW 333
SE R +M LL I LH L I HR + P N+LL D + + D +
Sbjct: 108 SEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEK 165
Query: 334 CTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
E + +D S
Sbjct: 166 LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 51.6 bits (123), Expect = 3e-07
Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEA 790
D++S G ++ L P F + L +G+ ++ + LV
Sbjct: 193 GKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSR 252
Query: 791 CITKDWTRRPSAKSLLESPYF 811
+ +R +A+ L P+F
Sbjct: 253 FLVVQPQKRYTAEEALAHPFF 273
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 58.2 bits (140), Expect = 3e-09
Identities = 27/145 (18%), Positives = 52/145 (35%), Gaps = 11/145 (7%)
Query: 224 DESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 283
DE + + HP + + G + + I ++ L + +F
Sbjct: 53 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAA 111
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 343
++ A+ YLHS I +R + P N+LL + + I D +P
Sbjct: 112 EVCLALEYLHSKDIIYRDLKPENILLDKNG--HIKITD--------FGFAKYVPDVTYTL 161
Query: 344 CCIEGCSSQGLYADLKLSQSMDWHS 368
C + + + ++S+DW S
Sbjct: 162 CGTPDYIAPEVVSTKPYNKSIDWWS 186
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.8 bits (100), Expect = 2e-04
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 9/83 (10%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDLPGVMEELPSHTRILVEACIT 793
+ S D +S G L+ E+ F + E N +L + L+ IT
Sbjct: 179 NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELR-FPPFFNEDVKDLLSRLIT 237
Query: 794 KDWTRR-----PSAKSLLESPYF 811
+D ++R + + P+F
Sbjct: 238 RDLSQRLGNLQNGTEDVKNHPWF 260
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 57.8 bits (139), Expect = 3e-09
Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 10/167 (5%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
++ + ++ ++FL E+S+ G HPNV + G++ S + +
Sbjct: 62 LKSGYTEKQRRDFLS--------EASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 113
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ + + + ++ + + + YL + HR + N+L+ + + D
Sbjct: 114 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL--VCKVSD 171
Query: 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
L F TS + G ++ K + + D S
Sbjct: 172 FGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.7 bits (92), Expect = 0.002
Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Query: 741 DIFSIGCLLAEL--HLRRPLFDSISLAVY--LENGDLPGVMEELPSHTRILVEACITKDW 796
D++S G ++ E+ + RP +D + V +E + PS L+ C KD
Sbjct: 215 DVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDR 274
Query: 797 TRRPSAKSLLES 808
RP ++ +
Sbjct: 275 NHRPKFGQIVNT 286
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.3 bits (140), Expect = 3e-09
Identities = 24/144 (16%), Positives = 46/144 (31%), Gaps = 11/144 (7%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E + + P + + K + + V+ SE H RF Q
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF-SEPHARFYAAQ 149
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 344
++ YLHSL + +R + P N+L+ + + A T + G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFG--------FAKRVKGRTWTLCGT 201
Query: 345 CIEGCSSQGLYADLKLSQSMDWHS 368
++++DW +
Sbjct: 202 PEALAPEI--ILSKGYNKAVDWWA 223
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 3e-09
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDWT 797
DI+S+GCLL EL P F + S LA + G + ++ +
Sbjct: 196 DIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDY 255
Query: 798 RRPSAKSLLESPY 810
RPS + +LE+P
Sbjct: 256 HRPSVEEILENPL 268
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.1 bits (101), Expect = 2e-04
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 20/128 (15%)
Query: 204 GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL--GLLKTSGLITSVIPKTPY-T 260
G + E + + E ++ L+HPN+ + +T+ + V+
Sbjct: 40 GSMTEAEKQMLVS--------EVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGD 91
Query: 261 LENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLG-----IAHRSVCPSNVLLTDSC 313
L +++ + E V +M QL A+ H + HR + P+NV L
Sbjct: 92 LASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQ 151
Query: 314 WSWLYICD 321
+ + D
Sbjct: 152 --NVKLGD 157
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (139), Expect = 4e-09
Identities = 34/146 (23%), Positives = 53/146 (36%), Gaps = 16/146 (10%)
Query: 232 LRHPNVAPVLGLLKTSG---------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLM 282
L H N+ + +SG L+ +P+T Y + + L +V+ M
Sbjct: 70 LDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTL-PVIYVKLYM 128
Query: 283 YQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMI 342
YQL ++AY+HS GI HR + P N+LL +CD +
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL-KLCDFGSAKQLVRGEPNVSYICSRY 187
Query: 343 GCCIEGCSSQGLYADLKLSQSMDWHS 368
E Y + S+D S
Sbjct: 188 YRAPELIFGATDY-----TSSIDVWS 208
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 24/154 (15%), Positives = 38/154 (24%), Gaps = 35/154 (22%)
Query: 689 ENGSRHVLSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCL 748
+ + L D L V E ++ Y +R S D++S GC+
Sbjct: 157 PDTAVLKLCDFGSAKQL----VRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV 212
Query: 749 LAELHLRRPLFD-------------------------------SISLAVYLENGDLPGVM 777
LAEL L +P+F +
Sbjct: 213 LAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFR 272
Query: 778 EELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
P L + T R + +F
Sbjct: 273 PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 4e-09
Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 14/170 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
+ ++F+ E+ V L HP + + G+ I V + +
Sbjct: 38 REGAMSEEDFIE--------EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSD 89
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324
+ L + + + + +AYL + HR + N L+ ++ + + D +
Sbjct: 90 YLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKVSDFGM 147
Query: 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWW 374
F + D ++ +S +++ + S D S W
Sbjct: 148 TRF--VLDDQYTSSTGTKFPV--KWASPEVFSFSRYSSKSDVWSFGVLMW 193
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.9 bits (90), Expect = 0.003
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 4/75 (5%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLF----DSISLAVYLENGDLPGVMEELPSHTRILVEACI 792
D++S G L+ E+ + + + + G +H ++ C
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 239
Query: 793 TKDWTRRPSAKSLLE 807
+ RP+ LL
Sbjct: 240 KERPEDRPAFSRLLR 254
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 57.5 bits (138), Expect = 4e-09
Identities = 21/96 (21%), Positives = 33/96 (34%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
ES + ++ P + G ++ + L + S V L Q
Sbjct: 52 ESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQ 111
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320
++S I Y+HS HR V P N L+ L
Sbjct: 112 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI 147
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.6 bits (94), Expect = 0.001
Identities = 13/98 (13%), Positives = 32/98 (32%), Gaps = 13/98 (13%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE----------NGDLPGVMEELPSHTRI 786
D+ S+G +L +L + + A + + + + + PS
Sbjct: 191 SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFAT 250
Query: 787 LVEACITKDWTRRPSA---KSLLESPYFPSTVKSSYLF 821
+ C + + +P + L + + Y+F
Sbjct: 251 YLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVF 288
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 5e-09
Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 7/114 (6%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
++PN+ L + V+ + E + + + L A+ +
Sbjct: 74 NKNPNIVNYLDSYLVGDELWVVMEYLAGGS--LTDVVTETCMDEGQIAAVCRECLQALEF 131
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCC 345
LHS + HR + N+LL + + D GF + S M+G
Sbjct: 132 LHSNQVIHRDIKSDNILLGMDG--SVKLTD---FGFCAQITPEQSKRSTMVGTP 180
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.1 bits (122), Expect = 4e-07
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVM-----EELPSHTRILVEAC 791
DI+S+G + E+ P + + + L G E+L + R + C
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 792 ITKDWTRRPSAKSLLESPYF 811
+ D +R SAK LL+ +
Sbjct: 254 LDMDVEKRGSAKELLQHQFL 273
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 57.2 bits (137), Expect = 5e-09
Identities = 45/233 (19%), Positives = 76/233 (32%), Gaps = 16/233 (6%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
PN+ + ++K T + + Q +++ +RF MY++L A+
Sbjct: 86 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT--LTDYDIRFYMYEILKALD 143
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCS 350
Y HS+GI HR V P NV++ L + D L F + + E
Sbjct: 144 YCHSMGIMHRDVKPHNVMIDHEHRK-LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLV 202
Query: 351 SQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDF 410
+Y S+D S + + F + + + D+
Sbjct: 203 DYQMY-----DYSLDMWSLGCMLA--SMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDY 255
Query: 411 STKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVC 463
K + D D+ R + + SE H VS E L L
Sbjct: 256 IDKYNIELDPRFNDILGRHSR------KRWERFVHSENQHLVSPEALDFLDKL 302
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.0 bits (137), Expect = 8e-09
Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 11/138 (7%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
P + + T ++ ++ L L + + SE +RF +++ +
Sbjct: 64 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLE 121
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCS 350
++H+ + +R + P+N+LL + + I D +A + +
Sbjct: 122 HMHNRFVVYRDLKPANILLDE--HGHVRISD------LGLACDFSKKKPHASVGTHGYMA 173
Query: 351 SQGLYADLKLSQSMDWHS 368
+ L + S DW S
Sbjct: 174 PEVLQKGVAYDSSADWFS 191
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 39.3 bits (91), Expect = 0.003
Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 10/85 (11%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE-----NGDLPGVMEELPSHTRILVEAC 791
D S D FS+GC+L +L F E + + R L+E
Sbjct: 184 DSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGL 243
Query: 792 ITKDWTRRPS-----AKSLLESPYF 811
+ +D RR A+ + ESP+F
Sbjct: 244 LQRDVNRRLGCLGRGAQEVKESPFF 268
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (135), Expect = 9e-09
Identities = 16/123 (13%), Positives = 45/123 (36%), Gaps = 10/123 (8%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
++ + ++ +FL E+ + G H N+ + G++ + +
Sbjct: 44 LKAGYTEKQRVDFLG--------EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA 95
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ + S + ++ + + + YL ++ HR + N+L+ + + D
Sbjct: 96 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKVSD 153
Query: 322 KPL 324
L
Sbjct: 154 FGL 156
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.7 bits (89), Expect = 0.004
Identities = 12/71 (16%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRILVEACITKDW 796
D++S G ++ E+ + + +G + PS L+ C ++
Sbjct: 195 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQER 254
Query: 797 TRRPSAKSLLE 807
RRP ++
Sbjct: 255 ARRPKFADIVS 265
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.4 bits (133), Expect = 1e-08
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 207 SGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG----LITSVIPKTPYTLE 262
+ ++ FL E+SV LRH N+ +LG++ ++T + K +L
Sbjct: 40 NDATAQAFLA--------EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG--SLV 89
Query: 263 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+ L+ ++ + + A+ YL HR + NVL+++
Sbjct: 90 DYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN 140
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (103), Expect = 8e-05
Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 4/71 (5%)
Query: 741 DIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDW 796
D++S G LL E R + I + +E G + P +++ C D
Sbjct: 182 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDA 241
Query: 797 TRRPSAKSLLE 807
RPS L E
Sbjct: 242 AMRPSFLQLRE 252
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.0 bits (132), Expect = 2e-08
Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 6/137 (4%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L HP + + + + + E RF +++SA+ Y
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSF-DETCTRFYTAEIVSALEY 123
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 351
LH GI HR + P N+LL + + I D G + + S
Sbjct: 124 LHGKGIIHRDLKPENILLNEDM--HIQITD---FGTAKVLSPESKQARANSFVGTAQYVS 178
Query: 352 QGLYADLKLSQSMDWHS 368
L + +S D +
Sbjct: 179 PELLTEKSACKSSDLWA 195
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.4 bits (107), Expect = 3e-05
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 14/86 (16%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN-----GDLPGVMEELPSHTRILVEAC 791
S D++++GC++ +L P F + + + + D P E+ R LVE
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP---EKFFPKARDLVEKL 244
Query: 792 ITKDWTRRPSAK------SLLESPYF 811
+ D T+R + L P+F
Sbjct: 245 LVLDATKRLGCEEMEGYGPLKAHPFF 270
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.7 bits (131), Expect = 3e-08
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 9/110 (8%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLEN 263
K E + FL+ E++V ++HPN+ +LG+ + Y L +
Sbjct: 51 KEDTMEVEEFLK--------EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 102
Query: 264 ILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
L+ S + ++ Q+ SA+ YL HR + N L+ ++
Sbjct: 103 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 152
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.9 bits (131), Expect = 3e-08
Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 13/143 (9%)
Query: 231 CLRHPNVAPVLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQL 285
HPNV + + S +T V L L P ++ +M+QL
Sbjct: 66 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 125
Query: 286 LSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCC 345
L + +LHS + HR + P N+L+T S L +A + +
Sbjct: 126 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG--------LARIYSFQMALTSVVV 177
Query: 346 IEGCSSQGLYADLKLSQSMDWHS 368
+ + + +D S
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWS 200
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 29/104 (27%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN-------------------------- 770
D++S+GC+ AE+ R+PLF S L
Sbjct: 193 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS 252
Query: 771 ---GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+ + ++ + L+ C+T + +R SA S L PYF
Sbjct: 253 KSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 296
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 4e-08
Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
P + G + G I+ + + + + E + + ++ + Y
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI-PEQILGKVSIAVIKGLTY 119
Query: 292 LHS-LGIAHRSVCPSNVLLTDSCWSWLYICD 321
L I HR V PSN+L+ + +CD
Sbjct: 120 LREKHKIMHRDVKPSNILVNSRG--EIKLCD 148
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (129), Expect = 4e-08
Identities = 19/118 (16%), Positives = 46/118 (38%), Gaps = 13/118 (11%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG--LITSVIPKTPY 259
++ +++ +R E+ + L +P + ++G+ + L+ +
Sbjct: 44 LKQGTEKADTEEMMR--------EAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGG-- 93
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317
L L + +V L++Q+ + YL HR + NVLL + ++ +
Sbjct: 94 PLHKFLVGKREEI-PVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKI 150
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.8 bits (129), Expect = 5e-08
Identities = 20/109 (18%), Positives = 38/109 (34%), Gaps = 13/109 (11%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG--LITSVIPKTPYTLE 262
+ Q+ + F E V RH N+ +G ++T + +L
Sbjct: 42 APTPQQLQAFKN--------EVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGS--SLY 91
Query: 263 NILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311
+ L + + Q + YLH+ I HR + +N+ L +
Sbjct: 92 HHLHIIETKF-EMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHE 139
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (113), Expect = 5e-06
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 16/105 (15%)
Query: 714 GSMEYQ--ELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN- 770
GS+ + E++ + K+ YS D+++ G +L EL + + +I+ +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSF------QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
Query: 771 -------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLES 808
DL V P + L+ C+ K RP +L S
Sbjct: 222 VGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (127), Expect = 1e-07
Identities = 25/139 (17%), Positives = 44/139 (31%), Gaps = 10/139 (7%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAI 289
HP + + +T + V+ L +Q F +++ +
Sbjct: 59 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGL 116
Query: 290 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGC 349
+LHS GI +R + N+LL I D F + C
Sbjct: 117 QFLHSKGIVYRDLKLDNILLDKDGHIK--IAD-----FGMCKENMLGDAKTNTFCGTPDY 169
Query: 350 SSQGLYADLKLSQSMDWHS 368
+ + K + S+DW S
Sbjct: 170 IAPEILLGQKYNHSVDWWS 188
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.0 bits (111), Expect = 9e-06
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 3/78 (3%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN--GDLPGVMEELPSHTRILVEACITK 794
+ S D +S G LL E+ + + F + D P L + L+ +
Sbjct: 181 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR 240
Query: 795 DWTRRPSAKS-LLESPYF 811
+ +R + + + P F
Sbjct: 241 EPEKRLGVRGDIRQHPLF 258
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 52.9 bits (126), Expect = 1e-07
Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 7/121 (5%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L P + GL ++ L S V Q+L+ +
Sbjct: 57 LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQS 116
Query: 292 LHSLGIAHRSVCPSNVLLTDSCW---SWLYICD----KPLVGFNSIADWCTIPTSPMIGC 344
+H + +R + P N L+ + +Y+ D K + + G
Sbjct: 117 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGT 176
Query: 345 C 345
Sbjct: 177 A 177
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.7 bits (126), Expect = 1e-07
Identities = 18/121 (14%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGDL---PGVMEELPSHTRILVEA 790
+ D +SIG + L P F + A E + +++ + +
Sbjct: 187 SKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRH 246
Query: 791 CITKDWTRRPSAKSLLESPYF-PSTVKSSYLFVAPLQLIARHGSRLQYAANFAKLGALKA 849
+ KD +R + + L+ P+ T + + + I ++ ++ ++ F ++
Sbjct: 247 LMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRH 306
Query: 850 M 850
M
Sbjct: 307 M 307
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.7 bits (113), Expect = 5e-06
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 232 LRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 288
++HPN+ + + ++ G LI ++ L + + +E L++Q+L A
Sbjct: 64 IKHPNIVALDDIYESGGHLYLIMQLVSGG--ELFDRIV--EKGFYTERDASRLIFQVLDA 119
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSW-LYICDKPL 324
+ YLH LGI HR + P N+L + I D L
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL 156
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.8 bits (125), Expect = 1e-07
Identities = 31/260 (11%), Positives = 78/260 (30%), Gaps = 17/260 (6%)
Query: 1313 WKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH 1372
W + ++ H + V + +A T++ W+ + GH
Sbjct: 3 WIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSA----SEDATIKVWDYETGDFERTLKGH 58
Query: 1373 EEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVF-------AEQSMDSLHGGSPSSS 1425
+ V DI S +ASC + + + S+ + G S
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS 118
Query: 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485
S+ T ++ + + + + + + + + ++R +
Sbjct: 119 ASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 175
Query: 1486 QKLHLWRG---EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542
+ R + + S + + + ++ +G +++DV
Sbjct: 176 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 235
Query: 1543 SGNVIASWRAHDGYVTKVRI 1562
+G + + HD +V V
Sbjct: 236 TGMCLMTLVGHDNWVRGVLF 255
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 46.3 bits (108), Expect = 2e-05
Identities = 39/216 (18%), Positives = 69/216 (31%), Gaps = 39/216 (18%)
Query: 1349 PGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLL 1406
T++ WE+ CV + GH E V + IASC D T+ VW T +
Sbjct: 119 ASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECK 178
Query: 1407 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVE 1466
+ E IS ++ T S S L +
Sbjct: 179 AELREHR-------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS--------- 222
Query: 1467 RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1526
G + +++ D++ G L G + V + K +
Sbjct: 223 ----GSRDKTIKMWDVSTGMCLMTLVG------HDNWVRGVLFHSGGK-----------F 261
Query: 1527 IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRI 1562
I + R++D ++ + + AH+ +VT +
Sbjct: 262 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 297
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 45.9 bits (107), Expect = 2e-05
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 6/81 (7%)
Query: 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDI 1379
L ++ H +R V + + T++ W+ C+ HE V +
Sbjct: 240 LMTLVGHDNWVRGVLFHSGGKFILSCA----DDKTLRVWDYKNKRCMKTLNAHEHFVTSL 295
Query: 1380 CVLSSSGRIASC--DGTLHVW 1398
++ + + D T+ VW
Sbjct: 296 DFHKTAPYVVTGSVDQTVKVW 316
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 1e-07
Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 232 LRHPNVAPVLGLLKTSG---LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 288
+RH NV +L + T P+ ++ + + E ++FL+YQ+L
Sbjct: 74 MRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKG 133
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337
+ Y+H+ GI HR + P N+ + + C + + + +
Sbjct: 134 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTR 182
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.4 bits (91), Expect = 0.003
Identities = 21/108 (19%), Positives = 34/108 (31%), Gaps = 33/108 (30%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAV------------------------------ 766
+ DI+S+GC++AE+ + LF
Sbjct: 197 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 256
Query: 767 ---YLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
LE D ++ L+E + D +R +A L PYF
Sbjct: 257 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 304
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.5 bits (125), Expect = 2e-07
Identities = 18/136 (13%), Positives = 39/136 (28%), Gaps = 28/136 (20%)
Query: 231 CLRHPNVAPVLG----------------------LLKTSGLITSVIPKTPYTLENILQFS 268
H N+ +LG L++ S + + +
Sbjct: 97 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 156
Query: 269 PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD----KPL 324
+ + + YQ+ + +L HR + NVL+T + ICD + +
Sbjct: 157 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK--VVKICDFGLARDI 214
Query: 325 VGFNSIADWCTIPTSP 340
+ ++
Sbjct: 215 MSDSNYVVRGNARLPV 230
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.6 bits (123), Expect = 2e-07
Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 1/108 (0%)
Query: 233 RHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYL 292
V +L + ++ + + + E R +Q+L A+ +
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 293 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSP 340
H+ G+ HR + N+L+ + L + D + +
Sbjct: 127 HNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLKDTVYTDFDGTR 173
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.5 bits (115), Expect = 3e-06
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLENGDLPGVMEELPSHTRILVEACITKDW 796
S ++S+G LL ++ F+ + G + + + S + L+ C+
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE---EIIRGQVF-FRQRVSSECQHLIRWCLALRP 243
Query: 797 TRRPSAKSLLESPYF 811
+ RP+ + + P+
Sbjct: 244 SDRPTFEEIQNHPWM 258
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.8 bits (121), Expect = 4e-07
Identities = 17/113 (15%), Positives = 30/113 (26%), Gaps = 8/113 (7%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
K F+ E+ V L H + + G+ I +
Sbjct: 37 KEGSMSEDEFIE--------EAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLN 88
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317
+ + + A+ YL S HR + N L+ D +
Sbjct: 89 YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKV 141
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 51.3 bits (122), Expect = 4e-07
Identities = 24/151 (15%), Positives = 47/151 (31%), Gaps = 15/151 (9%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSG-------LITSVIPKTPYTLENILQFSPNALKSEWH 277
E+ L HP + V + ++ + TL +I+ +
Sbjct: 57 EAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGV--TLRDIVHTEGP--MTPKR 112
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337
++ A+ + H GI HR V P+N++++ + + +IAD
Sbjct: 113 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI----ARAIADSGNSV 168
Query: 338 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
T S + D +S
Sbjct: 169 TQTAAVIGTAQYLSPEQARGDSVDARSDVYS 199
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.3 bits (122), Expect = 4e-07
Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 10/145 (6%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMY 283
ES V RHP + + +T + V+ L L + +E RF
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGA 112
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 343
+++SA+ YLHS + +R + N++L + I D G G
Sbjct: 113 EIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITD---FGLCKEGISDGATMKTFCG 167
Query: 344 CCIEGCSSQGLYADLKLSQSMDWHS 368
+ + D +++DW
Sbjct: 168 TP--EYLAPEVLEDNDYGRAVDWWG 190
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.3 bits (96), Expect = 7e-04
Identities = 18/106 (16%), Positives = 35/106 (33%), Gaps = 16/106 (15%)
Query: 714 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---N 770
G+ EY + D + +G ++ E+ R F + E
Sbjct: 167 GTPEYLAPEVLEDNDYGRAV-------DWWGLGVVMYEMMCGRLPFYNQDHERLFELILM 219
Query: 771 GDLPGVMEELPSHTRILVEACITKDWTRRPS-----AKSLLESPYF 811
++ L + L+ + KD +R AK ++E +F
Sbjct: 220 EEIR-FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (122), Expect = 4e-07
Identities = 40/235 (17%), Positives = 82/235 (34%), Gaps = 22/235 (9%)
Query: 232 LRHPNVAPVLGLLKTSGLIT--SVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAI 289
RH N+ + +++ + V T ++ + S H+ + +YQ+L +
Sbjct: 63 FRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 122
Query: 290 AYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGC 349
Y+HS + HR + PSN+LL +C L ICD L P G E
Sbjct: 123 KYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARV-------ADPDHDHTGFLTEYV 173
Query: 350 SSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTFHMVMPWVI 408
+++ A + S + + W G + L+ R + + + ++
Sbjct: 174 ATRWYRAPEIMLNSKGYTKSIDIWSVG-------CILAEMLSNRPIFPGKHYLDQLNHIL 226
Query: 409 DFSTKPDENFDSGSRDLSKSKWRLAKGDEQLDFTYSSSEIPHHVSDECLSELAVC 463
P + + +L + L+ + + + + + L L
Sbjct: 227 GILGSPSQEDLNCIINLKARNYLLSLPHKN---KVPWNRLFPNADSKALDLLDKM 278
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (95), Expect = 8e-04
Identities = 25/149 (16%), Positives = 43/149 (28%), Gaps = 33/149 (22%)
Query: 696 LSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR 755
+ D L + + EY +R + S DI+S+GC+LAE+
Sbjct: 150 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN 209
Query: 756 RPLFDSISLAVYLEN---------------------------------GDLPGVMEELPS 782
RP+F L + + S
Sbjct: 210 RPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADS 269
Query: 783 HTRILVEACITKDWTRRPSAKSLLESPYF 811
L++ +T + +R + L PY
Sbjct: 270 KALDLLDKMLTFNPHKRIEVEQALAHPYL 298
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 1e-06
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 9/112 (8%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
+ S + +K L E+ V + +P+V +LG+ TS + L
Sbjct: 46 LREATSPKANKEILD--------EAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCL 97
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+ ++ Q+ + YL + HR + NVL+
Sbjct: 98 LDY-VREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 148
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 49.5 bits (117), Expect = 1e-06
Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 7/144 (4%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E S+ L+H N+ + ++ T + V L+ +L L + + Q
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGL-ESVTAKSFLLQ 108
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGC 344
LL+ IAY H + HR + P N+L+ L I D L I +
Sbjct: 109 LLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHEIVTLWY 166
Query: 345 CIEGCSSQGLYADLKLSQSMDWHS 368
L K S ++D S
Sbjct: 167 RAPDV----LMGSKKYSTTIDIWS 186
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 31/139 (22%)
Query: 704 LLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSIS 763
L + L +R + + DI+S+GC+ AE+ PLF +S
Sbjct: 146 LARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 764 LAVYLEN-------------------------------GDLPGVMEELPSHTRILVEACI 792
A L ++ L L+ +
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKML 265
Query: 793 TKDWTRRPSAKSLLESPYF 811
D +R +AK LE YF
Sbjct: 266 KLDPNQRITAKQALEHAYF 284
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (117), Expect = 1e-06
Identities = 26/169 (15%), Positives = 47/169 (27%), Gaps = 13/169 (7%)
Query: 200 LLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY 259
L + + + +F+R E + L H N+ + G++ T + V P
Sbjct: 44 LKPDVLSQPEAMDDFIR--------EVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPL 94
Query: 260 TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319
+ Q+ + YL S HR + N+LL + I
Sbjct: 95 GSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 152
Query: 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
D L+ D + + S + D
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPF--AWCAPESLKTRTFSHASDTWM 199
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.9 bits (95), Expect = 8e-04
Identities = 12/76 (15%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 737 DCSKDIFSIGCLLAE-LHLRRPLFDSIS----LAVYLENGDLPGVMEELPSHTRILVEAC 791
+ D + G L E + + ++ L + G+ E+ P ++ C
Sbjct: 192 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQC 251
Query: 792 ITKDWTRRPSAKSLLE 807
RP+ +L +
Sbjct: 252 WAHKPEDRPTFVALRD 267
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 1e-06
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 7/136 (5%)
Query: 234 HPNVAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYL 292
P + + +T L + L L +E V+ + +++ A+ +L
Sbjct: 88 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHL 145
Query: 293 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQ 352
H LGI +R + N+LL + + + D L T G
Sbjct: 146 HKLGIIYRDIKLENILLDSNG--HVVLTDFGLSKE--FVADETERAYDFCGTIEYMAPDI 201
Query: 353 GLYADLKLSQSMDWHS 368
D +++DW S
Sbjct: 202 VRGGDSGHDKAVDWWS 217
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (99), Expect = 3e-04
Identities = 16/82 (19%), Positives = 29/82 (35%), Gaps = 11/82 (13%)
Query: 741 DIFSIGCLLAELHLRRPLFDSISLAVYLEN------GDLPGVMEELPSHTRILVEACITK 794
D +S+G L+ EL F P +E+ + + L++ + K
Sbjct: 214 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMK 273
Query: 795 DWTRRPS-----AKSLLESPYF 811
D +R A + E +F
Sbjct: 274 DPKKRLGCGPRDADEIKEHLFF 295
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.3 bits (117), Expect = 2e-06
Identities = 18/109 (16%), Positives = 42/109 (38%), Gaps = 8/109 (7%)
Query: 205 KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENI 264
K + FL+ E+ V LRH + + ++ + + +L +
Sbjct: 50 KPGTMSPEAFLQ--------EAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDF 101
Query: 265 LQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
L+ + + Q+ S +AY+ + HR + +N+L+ ++
Sbjct: 102 LKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL 150
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.2 bits (109), Expect = 1e-05
Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 6/91 (6%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAEL-HLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 785
+ D++S G LL EL R + + + +E G E P
Sbjct: 185 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH 244
Query: 786 ILVEACITKDWTRRPSAKSLLE--SPYFPST 814
L+ C K+ RP+ + L YF ST
Sbjct: 245 DLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.4 bits (117), Expect = 2e-06
Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 17/104 (16%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALK---------------- 273
H N+ +LG G + Y L N L+ ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317
+ YQ+ +A+L S HR + N+LLT + +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKI 186
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.8 bits (116), Expect = 2e-06
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 22/130 (16%)
Query: 201 LIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG-------LITSV 253
L + K + E + F E+ + L+HPN+ +++ L+T +
Sbjct: 42 LQDRKLTKSERQRFKE--------EAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 93
Query: 254 IPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD 311
+ TL+ L+ + +R Q+L + +LH+ I HR + N+ +T
Sbjct: 94 MTSG--TLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG 149
Query: 312 SCWSWLYICD 321
S + I D
Sbjct: 150 PTGS-VKIGD 158
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.4 bits (115), Expect = 3e-06
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 5/76 (6%)
Query: 741 DIFSIGCLLAELHLRRPLFDSIS-----LAVYLENGDLPGVMEELPSHTRILVEACITKD 795
D+++ G + E+ + + + ++E CI ++
Sbjct: 194 DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQN 253
Query: 796 WTRRPSAKSLLESPYF 811
R S K LL +F
Sbjct: 254 KDERYSIKDLLNHAFF 269
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 2e-06
Identities = 23/116 (19%), Positives = 44/116 (37%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E S+ L HPN+ +L ++ T + V L+ + S ++ ++Q
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSP 340
LL +A+ HS + HR + P N+L+ L + + +
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL 166
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (100), Expect = 2e-04
Identities = 30/139 (21%), Positives = 42/139 (30%), Gaps = 31/139 (22%)
Query: 704 LLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSIS 763
L V L +R + DI+S+GC+ AE+ RR LF S
Sbjct: 148 LARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 764 LAVYLEN-------------------------------GDLPGVMEELPSHTRILVEACI 792
L D V+ L R L+ +
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 793 TKDWTRRPSAKSLLESPYF 811
D +R SAK+ L P+F
Sbjct: 268 HYDPNKRISAKAALAHPFF 286
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.3 bits (114), Expect = 3e-06
Identities = 21/153 (13%), Positives = 45/153 (29%), Gaps = 23/153 (15%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQ--------------FSPNALKSE 275
HPN+ +LG + G + I P+ L + L+ S + S
Sbjct: 67 LGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126
Query: 276 WHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCT 335
+ + + YL HR + N+L+ ++ + ++
Sbjct: 127 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV--------AKIADFGLSRGQE 178
Query: 336 IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
+ +G + + + D S
Sbjct: 179 VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 211
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.2 bits (114), Expect = 4e-06
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 4/116 (3%)
Query: 696 LSDIDLEYLLEHLEVEDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHL 754
++D L + E + + +L + +T D++S G LL E +
Sbjct: 171 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 230
Query: 755 RRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807
P + ++ + VYL G E P ++ C RPS L+
Sbjct: 231 GAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 2e-04
Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Query: 225 ESSVPGCLRHPNVAPVLGL-LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMY 283
E + HPNV +LG+ L++ G V+P + + + +
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL 137
Query: 284 QLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
Q+ + +L S HR + N +L + + + D
Sbjct: 138 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVAD 173
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 5e-06
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 9/113 (7%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL 261
+ S + FL+ E+ HP++ ++G++ + + + T L
Sbjct: 43 CKNCTSDSVREKFLQ--------EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGEL 94
Query: 262 ENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314
+ LQ +L + YQL +A+AYL S HR + NVL++ +
Sbjct: 95 RSFLQVRKYSL-DLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC 146
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.4 bits (112), Expect = 6e-06
Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQ 284
E++V L +P + ++G+ + + + L LQ + + + ++ L++Q
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHV--KDKNIIELVHQ 115
Query: 285 LLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIG 343
+ + YL HR + NVLL ++ I D L + +
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAK--ISDFGLSKALRADENYYKAQTHGKW 172
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (108), Expect = 2e-05
Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 785
+ D++S G L+ E + + + + LE G+ G P
Sbjct: 181 CINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY 240
Query: 786 ILVEACITKDWTRRPSAKSL---LESPYF 811
L+ C T D RP ++ L + Y+
Sbjct: 241 DLMNLCWTYDVENRPGFAAVELRLRNYYY 269
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.5 bits (112), Expect = 7e-06
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L HPN+ +L I+ V LE I++ + L H++ M L + Y
Sbjct: 57 LSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLT-PSHIKAYMLMTLQGLEY 115
Query: 292 LHSLGIAHRSVCPSNVLLTDSCW 314
LH I HR + P+N+LL ++
Sbjct: 116 LHQHWILHRDLKPNNLLLDENGV 138
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.8 bits (105), Expect = 4e-05
Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 30/105 (28%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLF-------------------------DSISLAVYLENG 771
D++++GC+LAEL LR P D SL Y+
Sbjct: 179 GVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK 238
Query: 772 DLPG-----VMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
PG + L++ + R +A L+ YF
Sbjct: 239 SFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 283
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.3 bits (111), Expect = 8e-06
Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 14/153 (9%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
L+H N+ + +L + +++ + S N V+ ++QLL + +
Sbjct: 58 LKHKNIVRLHDVLHS-DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGF 116
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 351
HS + HR + P N+L+ + L +A IP +
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFG--------LARAFGIPVRCYSAEVVTLW-- 166
Query: 352 QGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384
Y + +S W E
Sbjct: 167 ---YRPPDVLFGAKLYSTSIDMWSAGCIFAELA 196
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.9 bits (97), Expect = 4e-04
Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 32/120 (26%)
Query: 724 WRQKSSYSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSISLAVYLEN------------ 770
+R S D++S GC+ AE + RPLF + L+
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 771 -------------------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
L V+ +L + R L++ + + +R SA+ L+ PYF
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.2 bits (111), Expect = 9e-06
Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 225 ESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTL-----ENILQFSPNALKSEWH-- 277
E + L+H NV ++ + +T + + Y + ++ N L
Sbjct: 59 EIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE 118
Query: 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337
++ +M LL+ + Y+H I HR + +NVL+T L + D L S+A
Sbjct: 119 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPN 176
Query: 338 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
+ + L + +D
Sbjct: 177 RYTNRVVTLWYRPPELLLGERDYGPPIDLWG 207
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.3 bits (93), Expect = 0.001
Identities = 17/132 (12%), Positives = 40/132 (30%), Gaps = 40/132 (30%)
Query: 714 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDS---------ISL 764
++ Y+ L + Y D++ GC++AE+ R P+ IS
Sbjct: 183 VTLWYRPPELLLGERDYGP------PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 236
Query: 765 AVYLENGDLPGVMEELPSHTRI-------------------------LVEACITKDWTRR 799
++ ++ + ++ L++ + D +R
Sbjct: 237 LCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR 296
Query: 800 PSAKSLLESPYF 811
+ L +F
Sbjct: 297 IDSDDALNHDFF 308
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.2 bits (111), Expect = 9e-06
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLI---TSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSA 288
++H NV +L + + + V T ++ ++ HV+FL+YQ+L
Sbjct: 74 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRG 133
Query: 289 IAYLHSLGIAHRSVCPSNVLLTDSCWSW 316
+ Y+HS I HR + PSN+ + + C
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELK 161
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.1 bits (90), Expect = 0.003
Identities = 21/115 (18%), Positives = 33/115 (28%), Gaps = 33/115 (28%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN------------------- 770
+ + DI+S+GC++AEL R LF L+
Sbjct: 190 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSE 249
Query: 771 --------------GDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYF 811
+ V L+E + D +R +A L YF
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.2 bits (106), Expect = 1e-05
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 3/91 (3%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIA 290
N L L+ + + L ++ + ++ +L +A
Sbjct: 58 IRSARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVA 117
Query: 291 YLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
+ GI H + NVL+++ ++I D
Sbjct: 118 KFYHRGIVHGDLSQYNVLVSE---EGIWIID 145
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 1e-05
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 6/81 (7%)
Query: 737 DCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN------GDLPGVMEELPSHTRILVEA 790
D++SIG + L F + L N + + +
Sbjct: 194 GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253
Query: 791 CITKDWTRRPSAKSLLESPYF 811
+ KD +R + + L+ P+
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWI 274
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.8 bits (100), Expect = 2e-04
Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 5/137 (3%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAY 291
++HPNV + + + + ++ +L E + Q+L+ + Y
Sbjct: 70 IQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLT-EEEATEFLKQILNGVYY 128
Query: 292 LHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS 351
LHSL IAH + P N++L D I + +A +
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIK----IIDFGLAHKIDFGNEFKNIFGTPEFVA 184
Query: 352 QGLYADLKLSQSMDWHS 368
+ L D S
Sbjct: 185 PEIVNYEPLGLEADMWS 201
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 2e-05
Identities = 25/153 (16%), Positives = 43/153 (28%), Gaps = 20/153 (13%)
Query: 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQF--------------SPNALKSE 275
+H N+ +LG G + ++ L LQ +P S
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 134
Query: 276 WHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCT 335
+ YQ+ + YL S HR + NVL+T+ + + T
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 336 IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
+ +Y + D S
Sbjct: 195 TNGRLPVKWMAPEALFDRIY-----THQSDVWS 222
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (99), Expect = 2e-04
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 741 DIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTRILVEACITKDW 796
D++S G LL E L + + L L+ G + +++ C
Sbjct: 219 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVP 278
Query: 797 TRRPSAKSLLE 807
++RP+ K L+E
Sbjct: 279 SQRPTFKQLVE 289
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 2e-05
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313
+ H+ +Q+ + +L S HR + N+LL++
Sbjct: 132 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKN 171
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.1 bits (105), Expect = 4e-05
Identities = 12/76 (15%), Positives = 25/76 (32%), Gaps = 6/76 (7%)
Query: 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSS 1385
+ SV+ + + W+ + + GH+ V+ + V
Sbjct: 269 IICGITSVSFSKSGRLLLAGY----DDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG 324
Query: 1386 GRIASC--DGTLHVWN 1399
+A+ D L +WN
Sbjct: 325 MAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 40.9 bits (94), Expect = 0.001
Identities = 35/287 (12%), Positives = 70/287 (24%), Gaps = 38/287 (13%)
Query: 1310 ESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY 1369
+ +I+ ++R H + ++ G D + +A G + W+ N V
Sbjct: 38 DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSAS----QDGKLIIWDSYTTNKVHAI 93
Query: 1370 YGHEEVVNDICVLSSSGRIASCDGT-------LHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422
V S +A L + S
Sbjct: 94 PLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLD 153
Query: 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1482
+ I + D L + L V G + S + D+
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDV 213
Query: 1483 NQGQKLHLWRG---EPTELGF----PSLVSA--------------ICACGSEKMQAGGAV 1521
+G + G + + F + + +
Sbjct: 214 REGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGI 273
Query: 1522 ASPSW------IAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRI 1562
S S+ + AG C ++D + HD V+ + +
Sbjct: 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGV 320
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 44.1 bits (103), Expect = 9e-05
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 274 SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321
S + Q+ + +AYL HR + N L+ ++ + I D
Sbjct: 138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENM--VVKIAD 183
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 43.3 bits (101), Expect = 1e-04
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 730 YSKTFSKDCSKDIFSIGCLLAE-LHLRRPLFDSIS---LAVYLENGDLPGVMEELPSHTR 785
D+++ G +L E + ++ + Y+ +G++ E P
Sbjct: 213 SIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELY 272
Query: 786 ILVEACITKDWTRRPSAKSLLE 807
L+ C +K RPS S+
Sbjct: 273 NLMRLCWSKLPADRPSFCSIHR 294
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.7 bits (99), Expect = 3e-04
Identities = 17/106 (16%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
Query: 264 ILQFSPNALKSEWHVRFLMYQLLSAIAYLH-SLGIAHRSVCPSNVLLTDSCWSWLYICDK 322
+++ + +V+ + QLL + Y+H GI H + P NVL+ +
Sbjct: 113 LIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE----NL 168
Query: 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS 368
+ + + C S + D S
Sbjct: 169 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 214
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 4e-04
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 17/122 (13%)
Query: 202 IEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPY-T 260
+ AS +E FL E+SV +V +LG++ ++
Sbjct: 58 VNEAASMRERIEFLN--------EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD 109
Query: 261 LENILQFSPNALK--------SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312
L++ L+ A+ S + + ++ +AYL++ HR + N ++ +
Sbjct: 110 LKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAED 169
Query: 313 CW 314
Sbjct: 170 FT 171
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (97), Expect = 5e-04
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 12/100 (12%)
Query: 232 LRHPNVAPVLGLLKTSGLITSVIPKTPYTLEN--ILQFSPNALKSEWHVRFLMYQLLSAI 289
LRH N+ + + + E+ + + + + L S +
Sbjct: 54 LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGL 113
Query: 290 AYLHS--------LGIAHRSVCPSNVLLTDSCWSWLYICD 321
A+LH IAHR + N+L+ + I D
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG--TCCIAD 151
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.1 bits (95), Expect = 7e-04
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 3/130 (2%)
Query: 223 FDESSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYT--LENILQFSPNALKSEWHVRF 280
+ E + C+ H N+ +L + + ++ L + +
Sbjct: 64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSY 123
Query: 281 LMYQLLSAIAYLHSLGIAHRSVCPSNVLLT-DSCWSWLYICDKPLVGFNSIADWCTIPTS 339
L+YQ+L I +LHS GI HR + PSN+++ D L G + + +
Sbjct: 124 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 340 PMIGCCIEGC 349
I G
Sbjct: 184 YRAPEVILGM 193
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (94), Expect = 9e-04
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Query: 1358 WELTRINCVSGYYGHEEVVNDICVLSSSGRI---ASCDGTLHVWNSQTGKLLSVF 1409
W + GH++ V I L G S D TL VW++ TGK L
Sbjct: 1 WRRGELKSPKVLKGHDDHV--ITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL 53
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.7 bits (93), Expect = 0.001
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 1369 YYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAE 1411
YGH + + + + + S +G ++ W+ TG VF +
Sbjct: 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD 52
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.1 bits (89), Expect = 0.004
Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 1363 INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGG 1420
I + H+ + + + SC DG L VW+++ + + +H
Sbjct: 4 IATANAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVH-- 59
Query: 1421 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455
S + ++ Q ++ L + +T+F G+L
Sbjct: 60 --KSGLHHVDVLQAIERDAFELCL-VATTSFSGDL 91
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.0 bits (89), Expect = 0.004
Identities = 33/253 (13%), Positives = 73/253 (28%), Gaps = 16/253 (6%)
Query: 1321 SSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDIC 1380
SS + +RSV D + T + + + + + D
Sbjct: 115 SSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ--GHEQDIYSLDYF 172
Query: 1381 VLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSN 1440
S D T+ +W+ +TG+ + + + SP +
Sbjct: 173 PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVW 232
Query: 1441 TLSSGILSTAFDGNLYTCLHHIECV---------ERLVVGIGNGSLRFIDINQGQKLHLW 1491
+G L D + H + V + +V G + S++ ++
Sbjct: 233 DSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS 292
Query: 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551
+ + + + + +I +G +D +SGN + +
Sbjct: 293 KT-----PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347
Query: 1552 AHDGYVTKVRIIS 1564
H V V + +
Sbjct: 348 GHRNSVISVAVAN 360
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1566 | |||
| d1t77a1 | 304 | Lipopolysaccharide-responsive and beige-like ancho | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.97 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.97 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.97 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.97 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.97 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.96 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.96 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.96 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.96 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.96 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.95 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.95 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.95 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.95 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.94 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.94 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.94 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.92 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.91 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.91 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.89 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.89 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.88 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.88 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.87 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.87 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.86 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.85 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.79 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.79 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 99.77 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 99.77 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.77 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.76 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 99.76 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.76 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 99.76 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 99.76 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 99.76 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 99.76 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.75 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 99.74 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 99.74 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 99.74 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 99.73 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 99.73 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.72 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.71 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 99.7 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 99.69 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 99.69 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 99.68 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.65 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 99.63 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.63 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.61 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.55 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 99.54 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 99.53 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 99.52 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.51 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 99.51 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 99.51 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 99.5 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 99.5 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 99.49 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 99.48 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 99.48 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 99.48 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 99.46 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.46 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 99.44 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 99.43 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 99.43 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 99.43 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 99.42 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 99.41 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 99.4 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 99.38 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 99.36 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.36 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 99.36 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.29 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.28 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.27 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.23 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.18 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 99.1 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.04 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.02 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.73 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.59 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.57 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 98.42 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.31 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.29 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.2 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.19 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.15 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 97.97 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.88 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 97.87 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.65 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.63 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.62 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.57 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 97.5 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.42 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.1 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.76 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.25 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 96.13 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 94.32 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 94.18 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 93.29 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 93.19 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 91.11 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 91.02 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 89.14 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 87.97 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 86.61 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 80.35 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 80.14 |
| >d1t77a1 a.169.1.1 (A:2186-2489) Lipopolysaccharide-responsive and beige-like anchor protein LRBA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: BEACH domain superfamily: BEACH domain family: BEACH domain domain: Lipopolysaccharide-responsive and beige-like anchor protein LRBA species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=537.14 Aligned_cols=235 Identities=34% Similarity=0.566 Sum_probs=206.7
Q ss_pred HCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCEEE-EECCC-CCCCCCCCCCCCCCCCCCCCCCCCC-EEEEE-
Q ss_conf 10011001346882133677731056557743201123567-40258-8988786432343232211358841-00121-
Q 000399 368 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQ-LDFTY- 443 (1566)
Q Consensus 368 ~~~D~Ws~G~Isnf~yL~~ln~~agRs~~dl~q~pv~Pwvl-d~~~~-~~~~~~~~~rdL~kp~~~l~~~~~~-~~~~~- 443 (1566)
..+..|..|.||||+|||.||.++||+++|++||||||||+ ||.++ .|++++..||||+|||+++++++.+ +...|
T Consensus 25 ~~t~kW~~g~iSNfeYLm~LN~~sGRSf~D~~qYPIfPWVi~dy~s~~ldl~~~~~~RDLskpig~l~~~r~~~~~~~~~ 104 (304)
T d1t77a1 25 NMTQRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERYE 104 (304)
T ss_dssp SHHHHHHTTSSCHHHHHHHHHHHHTCCSSCGGGCCCBCCCBCCCSSSSCCTTCGGGBCCTTSCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHH
T ss_conf 19999875797589999999997188888733276367452267764224568655126998220059889999999987
Q ss_pred ---ECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHC--CCCCCCCHHHHHHHCC------CCCCCCCCCCCCCC
Q ss_conf ---047888566076553210011233455235787766520--4899995345663024------98876675324820
Q 000399 444 ---SSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLYQW------TPDECIPEFYCDPQ 512 (1566)
Q Consensus 444 ---~~~~~p~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~~~------~~~EliPef~~~p~ 512 (1566)
.....++||+++|++++.|++||+|++|||++++.++++ +.+++.+.++.+.|.+ +++|||||||++||
T Consensus 105 ~~~~~~~~~~~y~s~yS~~~~V~~~L~R~ePft~l~~~lq~g~fD~~~R~F~si~~~~~~~~~~~~d~~EliPEFf~~Pe 184 (304)
T d1t77a1 105 SWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLPE 184 (304)
T ss_dssp HCCCSSSCCCSBSSCSCCHHHHHHHHTTSTTHHHHHHHHHTSSCCCTTTSCCBHHHHHHHHHHCTTCCCCBCGGGGTCGG
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCHHHCCHH
T ss_conf 21247898765577777716899888337853689898616866687535035999999861565541004842302757
Q ss_pred HHHCCC----------CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 010239----------9996444589999937899983422101453102112588531001243201333432125899
Q 000399 513 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 582 (1566)
Q Consensus 513 ~f~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDliFG~kq~g~~a~~a~Nvf~~~~~ 582 (1566)
+|+|.| ..|+||+||+||++|++||++||+||||++||++||+||||||||||+|++|++|+|||||.++
T Consensus 185 ~f~n~n~~~~g~~~~g~~v~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLiFG~kq~G~~A~~a~Nvf~p~~Y 264 (304)
T d1t77a1 185 MFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLTY 264 (304)
T ss_dssp GGSCTTCCCCCBCTTSCBCSSCBCCTTCSSHHHHHHHHHHHHHSHHHHTTHHHHHHHHTSTTSSHHHHHHHTCCBCGGGS
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC
T ss_conf 65201455435356888656541687668819999999999704377767666677640103578888973464555454
Q ss_pred CCC------------------CCCCC--CCCCCCCCCCCC
Q ss_conf 999------------------74433--321234788744
Q 000399 583 PTK------------------PKSVG--RLQLFTQPHPVR 602 (1566)
Q Consensus 583 ~~~------------------~~~~g--~~qlf~~pHp~r 602 (1566)
+.. .+.+| |.|||++|||+|
T Consensus 265 ~~~~~~~~~~d~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 304 (304)
T d1t77a1 265 EGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 304 (304)
T ss_dssp TTSCCGGGCCSHHHHHHHHHHHHHHCCCCCCCCSSCCCCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
T ss_conf 6645510258989999999999977998134228999898
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=348.49 Aligned_cols=149 Identities=20% Similarity=0.236 Sum_probs=131.7
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+||+|+++ .++..||+|++.+... .....++. +|+.+|+.++|||||++
T Consensus 4 ~~dy~~~~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~-~~~~~~~~--------~Ei~~l~~l~HpnIv~~ 68 (271)
T d1nvra_ 4 VEDWDLVQTLGEGAYGEVQLAVNR------VTEEAVAVKIVDMKRA-VDCPENIK--------KEICINKMLNHENVVKF 68 (271)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECC--------CHH--------HHHHHHHTCCCTTBCCE
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHC-CHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 746089989721748099999999------9997999999845664-12799999--------99999985799888469
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+++.+|+|||||++ +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 69 ~~~~~~~~~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~--~~KL 144 (271)
T d1nvra_ 69 YGHRREGNIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERD--NLKI 144 (271)
T ss_dssp EEEEEETTEEEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTC--CEEE
T ss_pred EEEECCCCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 654046743679886458980899975--379999999999999999999999975983575468997887899--8798
Q ss_pred CCCCCCCCC
Q ss_conf 076877765
Q 000399 320 CDKPLVGFN 328 (1566)
Q Consensus 320 ~DFGla~~~ 328 (1566)
+|||+|+..
T Consensus 145 ~DFG~a~~~ 153 (271)
T d1nvra_ 145 SDFGLATVF 153 (271)
T ss_dssp CCCTTCEEC
T ss_pred CCCHHHEEE
T ss_conf 323142240
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=0 Score=341.28 Aligned_cols=152 Identities=13% Similarity=0.121 Sum_probs=129.7
Q ss_pred HHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21001223025550313569999731026771000101113354214466221101202177787889998745699831
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.+.++|++++.||+|+||.||+|+++ .++..||+|++.+... .....+. +|+.+|+.++|||||
T Consensus 23 ~il~~Y~i~~~lG~G~fg~Vy~~~~~------~~g~~vAvK~i~~~~~--~~~~~~~--------~E~~il~~l~HpnIv 86 (350)
T d1koaa2 23 HVLDHYDIHEELGTGAFGVVHRVTER------ATGNNFAAKFVMTPHE--SDKETVR--------KEIQTMSVLRHPTLV 86 (350)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEET------TTTEEEEEEEECCCSH--HHHHHHH--------HHHHHHHHTCCTTBC
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCH--HHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 78657589889840768199999988------9998999999845243--1699999--------999999867997999
Q ss_pred CCCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 200110135731230248864-2221301491111201478999999999999876225567775678721011001234
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~i 317 (1566)
++++++.+++.+|+|||||+| +|.+++.. ..+.+++..++.+++||+.||.|||++||+||||||+|||++.+....+
T Consensus 87 ~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~v 165 (350)
T d1koaa2 87 NLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 165 (350)
T ss_dssp CEEEEEEETTEEEEEECCCCSCBHHHHHTC-TTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCE
T ss_pred CEEEEEEECCEEEEEEECCCCCCHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEE
T ss_conf 299999989999999985799889999976-2378999999999999999999997569760001546736416889869
Q ss_pred HHCCCCCCCC
Q ss_conf 2407687776
Q 000399 318 YICDKPLVGF 327 (1566)
Q Consensus 318 KI~DFGla~~ 327 (1566)
||+|||+|+.
T Consensus 166 kL~DFG~a~~ 175 (350)
T d1koaa2 166 KLIDFGLTAH 175 (350)
T ss_dssp EECCCTTCEE
T ss_pred EEEECCHHEE
T ss_conf 9954521044
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=340.10 Aligned_cols=146 Identities=14% Similarity=0.116 Sum_probs=128.6
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||+||+|+++ .++..||+|++...... ....+. +|+.+|+.++|||||++
T Consensus 19 ~~~Y~~~~~iG~G~fg~Vy~a~~~------~~~~~vAvK~~~~~~~~--~~~~~~--------~E~~il~~l~HpnIv~~ 82 (293)
T d1yhwa1 19 KKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQP--KKELII--------NEILVMRENKNPNIVNY 82 (293)
T ss_dssp TTTBCSCEECCCSSSCEEEEEEBT------TTCCEEEEEEEEGGGCS--CHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEEECCCCH--HHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 105388789812858299999998------99989999998430172--799999--------99999986799988058
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+++.+|+|||||+| +|.+++. .+.+++..++.+++|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 83 ~~~~~~~~~~~ivmEy~~gg~L~~~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--~vkl 157 (293)
T d1yhwa1 83 LDSYLVGDELWVVMEYLAGGSLTDVVT---ETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 157 (293)
T ss_dssp EEEEEETTEEEEEEECCTTCBHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEEECCCCCHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 577988999899997037980898864---15999999999999999999999987972267768886887899--6864
Q ss_pred CCCCCCCC
Q ss_conf 07687776
Q 000399 320 CDKPLVGF 327 (1566)
Q Consensus 320 ~DFGla~~ 327 (1566)
+|||+|+.
T Consensus 158 ~DFG~a~~ 165 (293)
T d1yhwa1 158 TDFGFCAQ 165 (293)
T ss_dssp CCCTTCEE
T ss_pred CCCHHHEE
T ss_conf 25156413
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=339.39 Aligned_cols=149 Identities=21% Similarity=0.304 Sum_probs=128.5
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+.+.|++.+.||+|+||+||+|+++ .++..||+|.+.+..... ....+. +|+.+|+.++|||||+
T Consensus 7 i~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~-~~~~~~--------~Ei~il~~l~HpnIv~ 71 (307)
T d1a06a_ 7 IRDIYDFRDVLGTGAFSEVILAEDK------RTQKLVAIKCIAKKALEG-KEGSME--------NEIAVLHKIKHPNIVA 71 (307)
T ss_dssp GGGTEEEEEESBSGGGGGEEEEEET------TTCCEEEEEEEEC-----------C--------HHHHHHHTCCCTTBCC
T ss_pred CCCCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECHHHHHH-HHHHHH--------HHHHHHHHCCCCCCCC
T ss_conf 7666699889940658399999999------999899999981577312-899999--------9999998679989991
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC---CCHH
Q ss_conf 00110135731230248864-2221301491111201478999999999999876225567775678721011---0012
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD---SCWS 315 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~---~~~~ 315 (1566)
+++++.+++.+|+|||||+| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||+.. ++
T Consensus 72 l~~~~~~~~~~~lvmE~~~gg~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~-- 147 (307)
T d1a06a_ 72 LDDIYESGGHLYLIMQLVSGGELFDRIV--EKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS-- 147 (307)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHH--TCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTC--
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCC--
T ss_conf 9899998998889885268984888653--036788789999999999998752413055687046300110468882--
Q ss_pred HHHHCCCCCCCC
Q ss_conf 342407687776
Q 000399 316 WLYICDKPLVGF 327 (1566)
Q Consensus 316 ~iKI~DFGla~~ 327 (1566)
.+||+|||+|+.
T Consensus 148 ~vkl~DFG~a~~ 159 (307)
T d1a06a_ 148 KIMISDFGLSKM 159 (307)
T ss_dssp CEEECCC-----
T ss_pred EEEEECCCEEEE
T ss_conf 499831543587
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=339.39 Aligned_cols=149 Identities=19% Similarity=0.210 Sum_probs=130.1
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|++++.||+|+||.||+|+++ .++..||+|++.+. .....+++. +|+.+|+.++|||||++
T Consensus 11 ~d~Y~i~~~iG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~--~~~~~~~~~--------~E~~il~~l~HpnIv~l 74 (288)
T d2jfla1 11 EDFWEIIGELGDGAFGKVYKAQNK------ETSVLAAAKVIDTK--SEEELEDYM--------VEIDILASCDHPNIVKL 74 (288)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECS--SSGGGGGTH--------HHHHHHHHCCCTTBCCE
T ss_pred CCCEEEEEEEEECCCCEEEEEEEC------CCCEEEEEEEECCC--CHHHHHHHH--------HHHHHHHHCCCCCCCEE
T ss_conf 037598479930778199999999------99939999998728--999999999--------99999986799998849
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+++.+|+|||||++ +|.+++.. ..+.+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 75 ~~~~~~~~~~~lvmEy~~~g~L~~~~~~-~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~--~~Kl 151 (288)
T d2jfla1 75 LDAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDG--DIKL 151 (288)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECCCC--CEEE
T ss_conf 8898009958999962799818899986-289999999999999999999999988988714070031487899--9899
Q ss_pred CCCCCCCCC
Q ss_conf 076877765
Q 000399 320 CDKPLVGFN 328 (1566)
Q Consensus 320 ~DFGla~~~ 328 (1566)
+|||+|+..
T Consensus 152 ~DFG~a~~~ 160 (288)
T d2jfla1 152 ADFGVSAKN 160 (288)
T ss_dssp CCCTTCEEC
T ss_pred EECHHHHCC
T ss_conf 716123035
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=338.79 Aligned_cols=153 Identities=15% Similarity=0.110 Sum_probs=129.5
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCC-HHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110-12021777878899987456998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKN-FLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~-~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+++|++.+.||+|+||.||+|++. .++..||+|++.+.......... +++. .+|+.+++.++|||||+
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~------~t~~~vAiK~i~~~~~~~~~~~~~~~~e-----~~~~~~l~~~~hpnIv~ 71 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNE-----RIMLSLVSTGDCPFIVC 71 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHHTCHHHHHHH-----HHHHHHHSSSCCTTBCC
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHHHHH-----HHHHHHHHCCCCCCEEE
T ss_conf 776851018842889099999999------9997999999845875426679999999-----99999985089985889
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
+++++.+.+.+|+|||||+| +|.+++. ....+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+|
T Consensus 72 l~~~~~~~~~~~ivmE~~~gg~L~~~l~--~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g--~iK 147 (364)
T d1omwa3 72 MSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVR 147 (364)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSS--CEE
T ss_pred EEEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCC--CEE
T ss_conf 9999998998899999148983899987--325532789999999999999999977962204442216785889--679
Q ss_pred HCCCCCCCCC
Q ss_conf 4076877765
Q 000399 319 ICDKPLVGFN 328 (1566)
Q Consensus 319 I~DFGla~~~ 328 (1566)
|+|||+|+..
T Consensus 148 l~DFGla~~~ 157 (364)
T d1omwa3 148 ISDLGLACDF 157 (364)
T ss_dssp ECCCTTCEEC
T ss_pred EEEECEEEEC
T ss_conf 8220102333
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=333.44 Aligned_cols=195 Identities=19% Similarity=0.223 Sum_probs=156.3
Q ss_pred CCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCC---CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2302555031356999973102677100010111335421446622---1101202177787889998745699831200
Q 000399 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE---SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 165 ~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~---~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.++.||+|+||+||+|+++ .++..||+|++......... ...++ +|+.+|+.++|||||+++
T Consensus 1 E~l~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~~~--------~Ei~il~~l~hpnIv~~~ 66 (299)
T d1ua2a_ 1 EKLDFLGEGQFATVYKARDK------NTNQIVAIKKIKLGHRSEAKDGINRTAL--------REIKLLQELSHPNIIGLL 66 (299)
T ss_dssp CEEEEEEEETTEEEEEEECS------SCCSEEEEEEC------------CTHHH--------HHHHHHHHCCCTTBCCEE
T ss_pred CCCEEECCCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHHHHHHHHHHH--------HHHHHHHHCCCCCEEEEE
T ss_conf 95638512728299999999------9996999999842021245679999999--------999999867999986898
Q ss_pred CCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 11013573123024886422213014911112014789999999999998762255677756787210110012342407
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI~D 321 (1566)
+++..++.+|+||||+.+.+...+.. ....+++..++.+++||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~~ivmE~~~~~~~~~~~~-~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~--~~KL~D 143 (299)
T d1ua2a_ 67 DAFGHKSNISLVFDFMETDLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENG--VLKLAD 143 (299)
T ss_dssp EEECCTTCCEEEEECCSEEHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC--CEEECC
T ss_pred EEECCCCCEEEHHHHHCCHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCC--CCCCCC
T ss_conf 54225874022045534507765541-266778999999999999999886316355035776258853778--411465
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC-CCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 68777655655568999981224205986333322233364-43011100110013468821336777310565
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 322 FGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~-~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs 394 (1566)
||+|+....... .....+||+.|+|||++. +..|+..+|+|+.|++ ++..+.|+.
T Consensus 144 FG~a~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi-------l~el~~g~~ 199 (299)
T d1ua2a_ 144 FGLAKSFGSPNR-----------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCI-------LAELLLRVP 199 (299)
T ss_dssp CGGGSTTTSCCC-----------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHH-------HHHHHHSSC
T ss_pred CCCCCCCCCCCC-----------CCCCEECCHHHCCHHHHCCCCCCCHHHHHHHCCHH-------HHHHHHCCC
T ss_conf 761000578755-----------43302047333639997267788805643630428-------999985969
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=330.52 Aligned_cols=200 Identities=17% Similarity=0.208 Sum_probs=164.4
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+++|++++.||+|+||.||+|++. .++..||+|++...........++. +|+.+|+.++|||||++
T Consensus 1 ~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~Ei~il~~l~Hp~Iv~~ 66 (298)
T d1gz8a_ 1 MENFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKL 66 (298)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEEC-------CCHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCCEECCEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 999776517723768099999999------9997999999802225758999999--------99999986799838874
Q ss_pred CCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 01101357312302488642221301491111201478999999999999876225567775678721011001234240
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI~ 320 (1566)
++++.+++.+|+||||+.+++.+++.......+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~--~~kl~ 144 (298)
T d1gz8a_ 67 LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLA 144 (298)
T ss_dssp EEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEEC
T ss_pred CCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCC--CCEEC
T ss_conf 4533224320378862377445554420256888899999999999999986528899213571140113467--62103
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH-HHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 7687776556555689999812242059863333222333644301-1100110013468821336777310565
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDW-HSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y-~~~~D~Ws~G~Isnf~yL~~ln~~agRs 394 (1566)
|||.|+....... ......||+.|+|||++....+ +..+|+|+.|++ .+.++.|+.
T Consensus 145 DFG~a~~~~~~~~-----------~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvi-------ly~m~~G~~ 201 (298)
T d1gz8a_ 145 DFGLARAFGVPVR-----------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI-------FAEMVTRRA 201 (298)
T ss_dssp STTHHHHHCCCSB-----------CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHH-------HHHHHHSSC
T ss_pred CCCCCEECCCCCC-----------CCEEECCCCEEEEHHHHCCCCCCCCCCCCCCCCHH-------HHHHHHCCC
T ss_conf 5786134368864-----------10010365215411221366577742210333313-------427966879
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=326.84 Aligned_cols=148 Identities=22% Similarity=0.198 Sum_probs=125.2
Q ss_pred CCC-CCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 012-2302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 162 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y-~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++| +..++||+|+||+||+|++. .++..||+|.+............+. +|+++|+.++|||||++
T Consensus 8 gry~~~~~~iG~G~fg~Vy~~~~~------~~~~~va~K~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~ 73 (270)
T d1t4ha_ 8 GRFLKFDIEIGRGSFKTVYKGLDT------ETTVEVAWCELQDRKLTKSERQRFK--------EEAEMLKGLQHPNIVRF 73 (270)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEGGGSCHHHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCEEEEEEEEECCCCCEEEEEEEC------CCCEEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 877885169700828499999999------9995999999851227989999999--------99999985799985069
Q ss_pred CCCCCC----CCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCC-C
Q ss_conf 011013----5731230248864-2221301491111201478999999999999876225--567775678721011-0
Q 000399 241 LGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD-S 312 (1566)
Q Consensus 241 ~~~~~~----~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~g--IiHrDLKP~NILl~~-~ 312 (1566)
++++++ ...+|+||||+++ +|.++++ +...+++..++.++.|++.||.|||+++ |+||||||+|||++. +
T Consensus 74 ~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~--~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~ 151 (270)
T d1t4ha_ 74 YDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 151 (270)
T ss_dssp EEEEEEESSSCEEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTT
T ss_pred EEEEEECCCCCCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCEEECCC
T ss_conf 9998403345888999995789894899975--13554699999999999999999997899799687674351166799
Q ss_pred CHHHHHHCCCCCCCC
Q ss_conf 012342407687776
Q 000399 313 CWSWLYICDKPLVGF 327 (1566)
Q Consensus 313 ~~~~iKI~DFGla~~ 327 (1566)
+ .+||+|||+|+.
T Consensus 152 ~--~~Kl~DFGla~~ 164 (270)
T d1t4ha_ 152 G--SVKIGDLGLATL 164 (270)
T ss_dssp S--CEEECCTTGGGG
T ss_pred C--CEEEEECCCCEE
T ss_conf 9--889800576542
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=321.53 Aligned_cols=202 Identities=19% Similarity=0.220 Sum_probs=161.0
Q ss_pred HHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC---CCC
Q ss_conf 21001223025550313569999731026771000101113354214466221101202177787889998745---699
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHP 235 (1566)
Q Consensus 159 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l---~Hp 235 (1566)
+..++|++++.||+|+||+||+|++.. ..+..||+|++.............+ +|+.+|+.+ +||
T Consensus 4 ~~~~~Y~i~~~LG~G~fg~V~~a~~~~-----~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~~l~~l~~~~Hp 70 (305)
T d1blxa_ 4 RADQQYECVAEIGEGAYGKVFKARDLK-----NGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFEHP 70 (305)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETT-----TTTEEEEEEEEEEEBCTTSCBCTHH--------HHHHHHHHHHHTCCT
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEEEC-----CCCEEEEEEEEEHHHCCCHHHHHHH--------HHHHHHHHHHHCCCC
T ss_conf 875897988899215586999999988-----8998999999802324516799999--------999999987425898
Q ss_pred CCCCCCCCCCC-----CCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 83120011013-----5731230248864222130149111120147899999999999987622556777567872101
Q 000399 236 NVAPVLGLLKT-----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 236 NIV~l~~~~~~-----~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~ 310 (1566)
||++++++|.. ...+|++||++++.+..+........+++..++.+++|++.||.|||+++|+||||||+|||++
T Consensus 71 nIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~ 150 (305)
T d1blxa_ 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT 150 (305)
T ss_dssp TBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred CCCEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEC
T ss_conf 80236632214666667469999974058714444430378999899999999999999999758898357986278985
Q ss_pred CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 10012342407687776556555689999812242059863333222333644301110011001346882133677731
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKL 390 (1566)
Q Consensus 311 ~~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~ 390 (1566)
.++ .+||+|||+++....... .....||+.|+|||++.+..|+..+|+|+.|++ ++..+
T Consensus 151 ~~~--~~kl~dfg~~~~~~~~~~------------~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~i-------l~ell 209 (305)
T d1blxa_ 151 SSG--QIKLADFGLARIYSFQMA------------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-------FAEMF 209 (305)
T ss_dssp TTC--CEEECSCCSCCCCCGGGG------------GCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH-------HHHHH
T ss_pred CCC--CEEECCHHHHHHHCCCCC------------CCCCCCCHHHCCCCHHCCCCCCHHEHHHCHHHH-------HHHHH
T ss_conf 899--754210001011002345------------777654851148310017988811100032899-------99998
Q ss_pred CCCC
Q ss_conf 0565
Q 000399 391 AGRR 394 (1566)
Q Consensus 391 agRs 394 (1566)
.|+.
T Consensus 210 ~g~~ 213 (305)
T d1blxa_ 210 RRKP 213 (305)
T ss_dssp HSSC
T ss_pred HCCC
T ss_conf 7879
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=0 Score=322.14 Aligned_cols=154 Identities=20% Similarity=0.240 Sum_probs=131.8
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCC---CCHHHHCCCCCCCCCCCCCCCC-CCC
Q ss_conf 001223025550313569999731026771000101113354214466221---1012021777878899987456-998
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES---KNFLRLIGVPSFDESSVPGCLR-HPN 236 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~---~~~l~~~g~~~~rEi~iL~~l~-HpN 236 (1566)
.++|++.+.||+|+||+||+|++. .++..||+|++.+........ ++... .+++|+.+|+.++ |||
T Consensus 2 ~~~y~~~~~iG~G~~g~V~~~~~~------~~~~~~AvK~i~~~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~~hpn 71 (277)
T d1phka_ 2 YENYEPKEILGRGVSSVVRRCIHK------PTCKEYAVKIIDVTGGGSFSAEEVQELRE----ATLKEVDILRKVSGHPN 71 (277)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEEETTCSTTCCHHHHHHHHH----HHHHHHHHHHHHTTCTT
T ss_pred CCCCEECEEEECCCCEEEEEEEEC------CCCCEEEEEEEECCCCCCHHHHHHHHHHH----HHHHHHHHHHHHCCCCC
T ss_conf 663888528841768499999999------99989999999624464114788899999----99999999998507997
Q ss_pred CCCCCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 31200110135731230248864-22213014911112014789999999999998762255677756787210110012
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~ 315 (1566)
||++++++.+++.+|||||||++ +|.++++ ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 72 Iv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~-- 147 (277)
T d1phka_ 72 IIQLKDTYETNTFFFLVFDLMKKGELFDYLT--EKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDM-- 147 (277)
T ss_dssp BCCEEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTC--
T ss_pred EEEEEEECCCCCCEEEEEECCCCCHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--
T ss_conf 4799762146760599997689866899998--659999999999999999999999875994323462548986899--
Q ss_pred HHHHCCCCCCCCC
Q ss_conf 3424076877765
Q 000399 316 WLYICDKPLVGFN 328 (1566)
Q Consensus 316 ~iKI~DFGla~~~ 328 (1566)
.+||+|||+|+..
T Consensus 148 ~~kl~DFG~a~~~ 160 (277)
T d1phka_ 148 NIKLTDFGFSCQL 160 (277)
T ss_dssp CEEECCCTTCEEC
T ss_pred CEEECCCHHEEEC
T ss_conf 8387124031672
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=323.00 Aligned_cols=195 Identities=19% Similarity=0.301 Sum_probs=161.3
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+.++|++++.||+|+||.||+|+++ .++..||+|++.+.........+++ +|+.+|+.++|||||+
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~hpniv~ 81 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDG------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMRHENVIG 81 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEET------TTCCEEEEEECSSTTSSHHHHHHHH--------HHHHHHHHCCBTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 4771899889801778199999999------9998999999852225969999999--------9999998668987547
Q ss_pred CCCCCCCCC------CEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 001101357------31230248864222130149111120147899999999999987622556777567872101100
Q 000399 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~~------~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~ 313 (1566)
++++|...+ .+|+||||++.+|..+++ ...+++..++.+++|++.||.|||++||+||||||+|||++.++
T Consensus 82 l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~ 158 (346)
T d1cm8a_ 82 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDC 158 (346)
T ss_dssp CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred EEEEECCCCCCCCCCEEEEEEECCCCCHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
T ss_conf 999863576555541599998405521899987---40226999999999999999998737876456685111121001
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC-CHHHCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 123424076877765565556899998122420598633332223336443-0111001100134688213367773105
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~-~y~~~~D~Ws~G~Isnf~yL~~ln~~ag 392 (1566)
.+|++|||+|+..... .....|++.|+|||++.+. .++..+|+|+.|++ .+..+.|
T Consensus 159 --~~kl~Dfg~a~~~~~~--------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi-------l~ell~g 215 (346)
T d1cm8a_ 159 --ELKILDFGLARQADSE--------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI-------MAEMITG 215 (346)
T ss_dssp --CEEECCCTTCEECCSS--------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH-------HHHHHHS
T ss_pred --CCCCCCCCCEECCCCC--------------CCCCCCCCCCCCHHHHCCCCCCCCCCHHHCCHHH-------HHHHHHC
T ss_conf --2211343102206876--------------3102455333588998178789965010300389-------9999978
Q ss_pred CC
Q ss_conf 65
Q 000399 393 RR 394 (1566)
Q Consensus 393 Rs 394 (1566)
+.
T Consensus 216 ~~ 217 (346)
T d1cm8a_ 216 KT 217 (346)
T ss_dssp SC
T ss_pred CC
T ss_conf 69
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=323.89 Aligned_cols=154 Identities=13% Similarity=0.075 Sum_probs=127.6
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCC--CCCCC
Q ss_conf 0012230255503135699997310267710001011133542144662211012021777878899987456--99831
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR--HPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~--HpNIV 238 (1566)
.++|++.+.||+|+||.||+|++. .++..||+|.+.+............. ...+|+.+|+.++ |||||
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~----~~~~E~~il~~l~~~h~nIv 72 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRV------SDNLPVAIKHVEKDRISDWGELPNGT----RVPMEVVLLKKVSSGFSGVI 72 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEEGGGCCCEEECTTCC----EEEHHHHHHHHHCSSSCSBC
T ss_pred CCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH----HHHHHHHHHHHHCCCCCCCC
T ss_conf 883799679840878399999999------99979999998568844334556799----99999999997435898812
Q ss_pred CCCCCCCCCCCEEEECCCCCC--CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 200110135731230248864--222130149111120147899999999999987622556777567872101100123
Q 000399 239 PVLGLLKTSGLITSVIPKTPY--TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g--sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~ 316 (1566)
++++++.+++..|+|||++.+ ++.+++. ....+++..++.++.|++.||.|||+++|+||||||+|||++.+.. .
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~--~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~-~ 149 (273)
T d1xwsa_ 73 RLLDWFERPDSFVLILERPEPVQDLFDFIT--ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRG-E 149 (273)
T ss_dssp CEEEEEECSSEEEEEEECCSSEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT-E
T ss_pred EEEEEEEECCEEEEEEEECCCCCHHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC-E
T ss_conf 799998309968999983368622899986--1589999999999999999999998779755667611147744788-4
Q ss_pred HHHCCCCCCCC
Q ss_conf 42407687776
Q 000399 317 LYICDKPLVGF 327 (1566)
Q Consensus 317 iKI~DFGla~~ 327 (1566)
+||+|||+|+.
T Consensus 150 vkl~DFG~a~~ 160 (273)
T d1xwsa_ 150 LKLIDFGSGAL 160 (273)
T ss_dssp EEECCCTTCEE
T ss_pred EEECCCCCCEE
T ss_conf 89775465353
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=317.79 Aligned_cols=193 Identities=21% Similarity=0.278 Sum_probs=152.0
Q ss_pred CCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01223025550313569999731026771000101113354214466221101202177787889998745699831200
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|+.+++||+|+||+||+|+++ .++..||||++.+..... . +|+.+|+.++|||||+++
T Consensus 20 ~~Y~~~k~LG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~-------~-------~Ei~il~~l~h~niv~~~ 79 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFGVVYQAKLC------DSGELVAIKKVLQDKRFK-------N-------RELQIMRKLDHCNIVRLR 79 (350)
T ss_dssp EEEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECCSSSC-------C-------HHHHHHHHCCCTTBCCEE
T ss_pred CCCEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECCCCHHH-------H-------HHHHHHHHCCCCCCCCEE
T ss_conf 77675169821768399999999------999799999988160689-------9-------999999866898987387
Q ss_pred CCCCC------CCCEEEECCCCCCCHHHHHCC--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 11013------573123024886422213014--9111120147899999999999987622556777567872101100
Q 000399 242 GLLKT------SGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 242 ~~~~~------~~~l~lV~E~~~gsL~~~l~~--~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~ 313 (1566)
++|.. ..++|+|||||++++...+.. .....+++..++.+++|++.||.|||++||+||||||+|||++.++
T Consensus 80 ~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~ 159 (350)
T d1q5ka_ 80 YFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDT 159 (350)
T ss_dssp EEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTT
T ss_pred EEEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCC
T ss_conf 89974476577318999984168860788886310368999999999999999999999866876457886037873589
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC-CCCHHHCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 1234240768777655655568999981224205986333322233364-430111001100134688213367773105
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~-~~~y~~~~D~Ws~G~Isnf~yL~~ln~~ag 392 (1566)
. .+||+|||+|+....... .....|++.|+|||++. ...|+..+|+|+.|++ ++..+.|
T Consensus 160 ~-~~kl~DFG~a~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~i-------l~el~~g 219 (350)
T d1q5ka_ 160 A-VLKLCDFGSAKQLVRGEP------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCV-------LAELLLG 219 (350)
T ss_dssp C-CEEECCCTTCEECCTTSC------------CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHH-------HHHHHHT
T ss_pred C-CEEEECCCCHHHCCCCCC------------CCCCCCCCCCCCHHHHHCCCCCCCCEEECCCCEE-------EEEHHHC
T ss_conf 7-116733660544047765------------3200255555682776404688821000246527-------7855028
Q ss_pred CC
Q ss_conf 65
Q 000399 393 RR 394 (1566)
Q Consensus 393 Rs 394 (1566)
+.
T Consensus 220 ~~ 221 (350)
T d1q5ka_ 220 QP 221 (350)
T ss_dssp SC
T ss_pred CC
T ss_conf 79
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=0 Score=315.59 Aligned_cols=198 Identities=19% Similarity=0.209 Sum_probs=160.4
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||+|++ .++..||+|++...........++. +|+.+|+.++|||||++
T Consensus 1 ~~~Y~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~hpnIv~~ 65 (286)
T d1ob3a_ 1 MEKYHGLEKIGEGTYGVVYKAQN-------NYGETFALKKIRLEKEDEGIPSTTI--------REISILKELKHSNIVKL 65 (286)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEE-------TTSCEEEEEEECCSSGGGCCCHHHH--------HHHHGGGGCCCTTBCCE
T ss_pred CCCCEECCEEECCCCCEEEEEEE-------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 99963431872277818999996-------8999999999812326858999999--------99999986799868766
Q ss_pred CCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 01101357312302488642221301491111201478999999999999876225567775678721011001234240
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI~ 320 (1566)
++++...+..|++||++.+.+...+.. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+
T Consensus 66 ~~~~~~~~~~~i~~e~~~~~~~~~~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~--~~kl~ 142 (286)
T d1ob3a_ 66 YDVIHTKKRLVLVFEHLDQDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG--ELKIA 142 (286)
T ss_dssp EEEEECSSCEEEEEECCSEEHHHHHHT-STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTS--CEEEC
T ss_pred EEECCCCCCEEEEEEEEHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCC--CEEEC
T ss_conf 012046773158997400456789986-047751445689999999999986057488267877505686899--78732
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC-CHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 76877765565556899998122420598633332223336443-011100110013468821336777310565
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~-~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs 394 (1566)
|||.|........ ......+++.|+|||++.+. .++..+|+|+.|++ .+..+.|+.
T Consensus 143 DfG~a~~~~~~~~-----------~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~-------l~el~~G~~ 199 (286)
T d1ob3a_ 143 DFGLARAFGIPVR-----------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI-------FAEMVNGTP 199 (286)
T ss_dssp CTTHHHHHCC--------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHH-------HHHHHHSSC
T ss_pred CCCCCEECCCCCC-----------CCCEECCCCHHHHHHHHHCCCCCCCCEEEHHCCCH-------HHHHHHCCC
T ss_conf 3664301146765-----------41010243110137887178888841002111758-------999977979
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=314.99 Aligned_cols=201 Identities=20% Similarity=0.290 Sum_probs=152.4
Q ss_pred HHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21001223025550313569999731026771000101113354214466221101202177787889998745699831
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
++..+|++++.||+|+||.||+|+++ .++..||||++.+.. .....++++ +|+.+|+.++||||+
T Consensus 5 ~i~~rY~~~~~LG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~-~~~~~~~~~--------~Ei~il~~l~hp~iv 69 (345)
T d1pmea_ 5 DVGPRYTNLSYIGEGAYGMVCSAYDN------VNKVRVAIKKISPFE-HQTYCQRTL--------REIKILLRFRHENII 69 (345)
T ss_dssp CCCTTEEEEEECC---CCCEEEEEET------TTCSEEEEEEECCTT-CHHHHHHHH--------HHHHHHHHCCCTTBC
T ss_pred CCCCCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHC-CHHHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 73898599789940648099999999------999499999980310-958999999--------999999976898988
Q ss_pred CCCCCCCCCC-----CEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 2001101357-----31230248864222130149111120147899999999999987622556777567872101100
Q 000399 239 PVLGLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 239 ~l~~~~~~~~-----~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~ 313 (1566)
++++++.... .+|++++++.++|.+++. ...+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~~~g~L~~~l~---~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~ 146 (345)
T d1pmea_ 70 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLK---TQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC 146 (345)
T ss_dssp CCCEEECCSSTTTCCCEEEEEECCCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTC
T ss_pred CEEEEEEECCCCCCCEEEEEEEECCCCHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
T ss_conf 588899505645541499999625986566440---58999999999999999999999978986777876437887999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC-CCCHHHCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 1234240768777655655568999981224205986333322233364-430111001100134688213367773105
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~-~~~y~~~~D~Ws~G~Isnf~yL~~ln~~ag 392 (1566)
.+||+|||+|+.......... .....+|++.|+|||++. ...|...+|+|+.|++ .+..+.|
T Consensus 147 --~~kl~DfG~a~~~~~~~~~~~--------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~i-------l~eml~g 209 (345)
T d1pmea_ 147 --DLKICDFGLARVADPDHDHTG--------FLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI-------LAEMLSN 209 (345)
T ss_dssp --CEEECCCTTCEECCGGGCBCC--------TTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHH-------HHHHHHS
T ss_pred --CEEECCCCCEEECCCCCCCCE--------EECCCCCCCEECHHHHHHCCCCCCCHHHHHCCCCE-------EHHHHHC
T ss_conf --778754570565047776410--------10110265200038786047888741010046701-------3377669
Q ss_pred CC
Q ss_conf 65
Q 000399 393 RR 394 (1566)
Q Consensus 393 Rs 394 (1566)
+.
T Consensus 210 ~~ 211 (345)
T d1pmea_ 210 RP 211 (345)
T ss_dssp SC
T ss_pred CC
T ss_conf 79
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=312.01 Aligned_cols=195 Identities=22% Similarity=0.299 Sum_probs=151.5
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+.++|++++.||+|+||+||+|++. .++..||||++.+.........+++ +|+.+|+.++|||||+
T Consensus 16 ~~~rY~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~h~~iv~ 81 (348)
T d2gfsa1 16 VPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHENVIG 81 (348)
T ss_dssp EETTEEEEEECGGGTTSSEEEEEET------TTTEEEEEEECSCTTSSHHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCHHCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 8987188889831788399999999------9997999999882002868999999--------9999998668987425
Q ss_pred CCCCCCCC------CCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 00110135------731230248864222130149111120147899999999999987622556777567872101100
Q 000399 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~------~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~ 313 (1566)
+++++... ...|++++++.++|.+++. .+.+++..++.+++|++.||.|||++||+||||||+|||++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~---~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~ 158 (348)
T d2gfsa1 82 LLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 158 (348)
T ss_dssp CSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTC
T ss_pred EEEEEEECCCCCCCCEEEEEEEECCCCHHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 999996346456686499999625886232002---24530999999999999999999738876516677633455432
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-HHHCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 1234240768777655655568999981224205986333322233364430-111001100134688213367773105
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-WHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~-y~~~~D~Ws~G~Isnf~yL~~ln~~ag 392 (1566)
.+|++|||+|...... ..+..|++.|+|||+..+.. ++..+|+|+.|++ .+..+.|
T Consensus 159 --~~kl~dfg~a~~~~~~--------------~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~-------l~~ll~g 215 (348)
T d2gfsa1 159 --ELKILDFGLARHTDDE--------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI-------MAELLTG 215 (348)
T ss_dssp --CEEECCC----CCTGG--------------GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHH-------HHHHHHS
T ss_pred --CCCCCCCCHHCCCCCC--------------CCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHH-------HHHHHHC
T ss_conf --2001321000125754--------------4443454355583553377567855124320589-------9999768
Q ss_pred CC
Q ss_conf 65
Q 000399 393 RR 394 (1566)
Q Consensus 393 Rs 394 (1566)
+.
T Consensus 216 ~~ 217 (348)
T d2gfsa1 216 RT 217 (348)
T ss_dssp SC
T ss_pred CC
T ss_conf 89
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=312.73 Aligned_cols=151 Identities=19% Similarity=0.184 Sum_probs=133.7
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCC-CCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 001223025550313569999731026771000101113354214466221-1012021777878899987456998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+++|++++.||+|+||.||+|+++ .++..||+|++.+........ ..++ +|+.+|+.++|||||+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~~~~~------~~~~~~AiK~i~k~~~~~~~~~~~~~--------~E~~il~~l~hp~Iv~ 69 (337)
T d1o6la_ 4 MNDFDYLKLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTA 69 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHSCCCTTBCC
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 474289889831768499999998------99989999998156544979999999--------9999998679998877
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
++++|++.+.+|+|||||+| +|.+++. +.+.+++..++.+++|++.||.|||++||+||||||+|||++.++ ++|
T Consensus 70 l~~~~~~~~~~~iv~ey~~gg~L~~~~~--~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g--~vk 145 (337)
T d1o6la_ 70 LKYAFQTHDRLCFVMEYANGGELFFHLS--RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIK 145 (337)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CEE
T ss_pred EEEEECCCCCCCCCEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEE
T ss_conf 8764035642111000357986055553--256775999999999996521134315962246477784765899--888
Q ss_pred HCCCCCCCCCC
Q ss_conf 40768777655
Q 000399 319 ICDKPLVGFNS 329 (1566)
Q Consensus 319 I~DFGla~~~~ 329 (1566)
|+|||+|+...
T Consensus 146 l~DFG~a~~~~ 156 (337)
T d1o6la_ 146 ITDFGLCKEGI 156 (337)
T ss_dssp ECCCTTCBCSC
T ss_pred EEECCCCCCCC
T ss_conf 82056520035
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=300.78 Aligned_cols=198 Identities=18% Similarity=0.195 Sum_probs=161.1
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+||+|++. .++..||+|++...........++. +|+.+|+.++||||+++
T Consensus 1 ~~ry~~i~~LG~G~fg~V~~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~h~niv~~ 66 (292)
T d1unla_ 1 MQKYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSAL--------REICLLKELKHKNIVRL 66 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEEESSCSSTTHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 999786269712868199999999------9996999999803217868999999--------99999985675788821
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+....++|+|++.+ +|..++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~iv~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~--~~kl 142 (292)
T d1unla_ 67 HDVLHSDKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG--ELKL 142 (292)
T ss_dssp EEEEECSSEEEEEEECCSEEHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCC--CEEE
T ss_conf 354444431158863023322211212--356540367899999999998774339986001467612113378--2665
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-HHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 0768777655655568999981224205986333322233364430-11100110013468821336777310565
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-WHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~-y~~~~D~Ws~G~Isnf~yL~~ln~~agRs 394 (1566)
+|||.|+....... .....++++.|++||++.... ++..+|+|+.|++ .+..+.|+.
T Consensus 143 ~DFG~a~~~~~~~~-----------~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~i-------l~ell~g~~ 200 (292)
T d1unla_ 143 ANFGLARAFGIPVR-----------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI-------FAELANAGR 200 (292)
T ss_dssp CCCTTCEECCSCCS-----------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHH-------HHHHTTTSC
T ss_pred EECCHHHCCCCCCC-----------CCEEECCCCCHHHHHHHCCCCCCCCHHHCCCCCHH-------HHHHHHCCC
T ss_conf 20460110468875-----------10010344310146675069888804440265418-------899851899
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=308.31 Aligned_cols=152 Identities=20% Similarity=0.244 Sum_probs=133.1
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.+++|++.+.||+|+||.||+|+++ .++..||+|++.+.........+.+. +|+.+|+.++|||||+
T Consensus 4 ~l~dy~i~~~iG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~-------~E~~il~~l~hpnIv~ 70 (263)
T d2j4za1 4 ALEDFEIGRPLGKGKFGNVYLAREK------QSKFILALKVLFKAQLEKAGVEHQLR-------REVEIQSHLRHPNILR 70 (263)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH-------HHHHHHHTCCCTTBCC
T ss_pred CHHHEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH-------HHHHHHHHCCCCCCCE
T ss_conf 1537699889851778589999998------99949999998168856768999999-------9999998568888885
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
+++++.+++.+|+|||||++ +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 71 ~~~~~~~~~~~~ivmEy~~~g~L~~~l~--~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~--~~k 146 (263)
T d2j4za1 71 LYGYFHDATRVYLILEYAPLGTVYRELQ--KLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAG--ELK 146 (263)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--CEE
T ss_pred EEEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCC--CEE
T ss_conf 9999998999899985047985898875--048999999999999999999999988946522023441466899--871
Q ss_pred HCCCCCCCCC
Q ss_conf 4076877765
Q 000399 319 ICDKPLVGFN 328 (1566)
Q Consensus 319 I~DFGla~~~ 328 (1566)
|+|||+|+..
T Consensus 147 l~DFG~a~~~ 156 (263)
T d2j4za1 147 IADFGWSVHA 156 (263)
T ss_dssp ECCCCSCSCC
T ss_pred ECCCCEEEEC
T ss_conf 1555633544
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=309.40 Aligned_cols=152 Identities=19% Similarity=0.189 Sum_probs=132.7
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||+|+++ .++..||+|++.+.........+.+. +|+.+|+.++|||||++
T Consensus 7 p~dy~i~~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~-------~E~~il~~l~HpnIv~l 73 (288)
T d1uu3a_ 7 PEDFKFGKILGEGSFSTVVLAREL------ATSREYAIKILEKRHIIKENKVPYVT-------RERDVMSRLDHPFFVKL 73 (288)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH-------HHHHHHHHCCSTTBCCE
T ss_pred CCCCEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH-------HHHHHHHHCCCCCEEEE
T ss_conf 987789889850879099999998------99979999998657755777899999-------99999987688886179
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+++.+|+|||||+| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+|||+++++ .+||
T Consensus 74 ~~~~~~~~~~~ivmEy~~gg~L~~~~~--~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~--~vkl 149 (288)
T d1uu3a_ 74 YFTFQDDEKLYFGLSYAKNGELLKYIR--KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDM--HIQI 149 (288)
T ss_dssp EEEEECSSEEEEEECCCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCC--EEEE
T ss_conf 999998998899997048987777653--159999999999999999999762165088476774123668885--3886
Q ss_pred CCCCCCCCCC
Q ss_conf 0768777655
Q 000399 320 CDKPLVGFNS 329 (1566)
Q Consensus 320 ~DFGla~~~~ 329 (1566)
+|||+|+...
T Consensus 150 ~DFG~a~~~~ 159 (288)
T d1uu3a_ 150 TDFGTAKVLS 159 (288)
T ss_dssp CCCTTCEECC
T ss_pred CCCCCCEECC
T ss_conf 0321024225
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=302.56 Aligned_cols=195 Identities=16% Similarity=0.197 Sum_probs=167.0
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||+|++. .++..||+|++.+.. ......++. +|+.+|+.++|||||++
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~-~~~~~~~~~--------~Ei~il~~l~HpnIv~l 69 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHK------PSGLVMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 69 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEET------TTTEEEEEEEEECCC-CTTHHHHHH--------HHGGGGGGCCCTTBCCE
T ss_pred CCCCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHH-CHHHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 568889789712778099999998------999699999987540-978999999--------99999986799999949
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 0110135731230248864-22213014911112014789999999999998762-255677756787210110012342
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
+++|.+++.+|+||||++| +|.+++. +.+.+++..++.++.|++.||.|||+ +||+||||||+|||++.++ .+|
T Consensus 70 ~~~~~~~~~~~iVmEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~--~vk 145 (322)
T d1s9ja_ 70 YGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 145 (322)
T ss_dssp EEEEECSSEEEEEEECCTTEEHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTC--CEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEE
T ss_conf 999998999999997679986899874--2499999999999999999999999859997144577994687899--899
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 4076877765565556899998122420598633332223336443011100110013468821336777310565
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 319 I~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs 394 (1566)
|+|||+|+..... ...+.+||+.|+|||++.+..|+..+|+|+.|++ .+..++|+.
T Consensus 146 l~DFGla~~~~~~-------------~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvi-------l~ell~G~~ 201 (322)
T d1s9ja_ 146 LCDFGVSGQLIDS-------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS-------LVEMAVGRY 201 (322)
T ss_dssp ECCCCCCHHHHHH-------------TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHH-------HHHHHHSSC
T ss_pred EEECCCCCCCCCC-------------CCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHH-------HHHHHHCCC
T ss_conf 9548776256788-------------6211137714119468758998948889989999-------999998889
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=305.72 Aligned_cols=196 Identities=17% Similarity=0.161 Sum_probs=160.0
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCC-CCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622-11012021777878899987456998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+++|++++.||+|+||.||+|+++ .++..||+|++.+....... ...++ +|+.+|+.++|||||+
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~------~~g~~~AvK~i~~~~~~~~~~~~~~~--------~E~~il~~l~hpnIv~ 105 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHK------ESGNHYAMKILDKQKVVKLKQIEHTL--------NEKRILQAVNFPFLVK 105 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHTTCCCTTBCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 237089889611768089999998------99989999998267745889999999--------9999999748772740
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
+++++.+...+|+||||+.+ +|..++. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+|
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~g~l~~~l~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g--~ik 181 (350)
T d1rdqe_ 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLR--RIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG--YIQ 181 (350)
T ss_dssp EEEEEECSSEEEEEEECCTTCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTS--CEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCCCC--CEE
T ss_conf 3444432222232222334662266675--158989999999999999989999859986176799993607789--788
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 40768777655655568999981224205986333322233364430111001100134688213367773105655
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 I~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs~ 395 (1566)
|+|||+|+..... .....||+.|||||++.+..|+..+|+|+.|++ ++.++.|+.+
T Consensus 182 L~DFG~a~~~~~~--------------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvi-------lyemltG~~P 237 (350)
T d1rdqe_ 182 VTDFGFAKRVKGR--------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVL-------IYEMAAGYPP 237 (350)
T ss_dssp ECCCTTCEECSSC--------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHH-------HHHHHHSSCS
T ss_pred EEECEEEEECCCC--------------CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHH-------HHHHHHCCCC
T ss_conf 6101033322566--------------643367635678899717998853311450078-------9999758899
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=305.70 Aligned_cols=196 Identities=17% Similarity=0.213 Sum_probs=153.5
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+++|++++.||+|+||+||+|+++ .++..||+|++.+.........+.+. +|+.+|+.++|||||++
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~------~~g~~vAvK~i~~~~~~~~~~~~~~~-------~E~~il~~l~HpnIv~~ 69 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSR------HNGRYYAMKVLKKEIVVRLKQVEHTN-------DERLMLSIVTHPFIIRM 69 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH-------HHHHHHHSCCBTTBCCE
T ss_pred HHHEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH-------HHHHHHHHCCCCCHHHE
T ss_conf 547088889720768089999998------99979999998457754889999999-------99999986369675330
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+++.+|+|||||+| +|..++. ....+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 70 ~~~~~~~~~~~ivmE~~~gg~l~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g--~vkL 145 (316)
T d1fota_ 70 WGTFQDAQQIFMIMDYIEGGELFSLLR--KSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG--HIKI 145 (316)
T ss_dssp EEEEECSSEEEEEECCCCSCBHHHHHH--HTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTS--CEEE
T ss_pred EEEEEECCEEEEEEEECCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECCCC--CEEE
T ss_conf 356852880056765037863223432--222111007999999998765541247677055681050386899--8898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 076877765565556899998122420598633332223336443011100110013468821336777310565
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs 394 (1566)
+|||+|+..... .....||+.|+|||++.+..|+..+|+|+.|++ ++.+++|+.
T Consensus 146 ~DFG~a~~~~~~--------------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvi-------lyemltG~~ 199 (316)
T d1fota_ 146 TDFGFAKYVPDV--------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL-------IYEMLAGYT 199 (316)
T ss_dssp CCCSSCEECSSC--------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHH-------HHHHHHSSC
T ss_pred ECCCCCEEECCC--------------CCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCHH-------HHHHHHCCC
T ss_conf 317521671245--------------643457634359999838999804304653336-------899975989
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=303.44 Aligned_cols=151 Identities=17% Similarity=0.140 Sum_probs=129.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCC-CCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622-11012021777878899987456998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...|+.++.||+|+||.||+|++. .++..||+|.+.+....... ..++. +|+.+|+.++|||||+
T Consensus 14 ~~~y~~l~~lG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~~--------~Ei~il~~l~HpnIv~ 79 (309)
T d1u5ra_ 14 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQ 79 (309)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEECCSSCHHHHHHHHH--------HHHHHHTTCCCTTBCC
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 785676279701888099999998------99939999998444435889999999--------9999999778999823
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
+++++.+++.+|+|||||.+ +|..++. ..+.+++..++.+++|++.||.|||++||+||||||+|||++.++ .+|
T Consensus 80 ~~~~~~~~~~~~iv~E~~~~g~l~~~~~--~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~--~~K 155 (309)
T d1u5ra_ 80 YRGCYLREHTAWLVMEYCLGSASDLLEV--HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVK 155 (309)
T ss_dssp EEEEEEETTEEEEEEECCSEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTT--EEE
T ss_pred EEEEEEECCEEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCC--CEE
T ss_conf 8999998998899998069994578997--379999999999999999999999868976667884217987999--789
Q ss_pred HCCCCCCCCCC
Q ss_conf 40768777655
Q 000399 319 ICDKPLVGFNS 329 (1566)
Q Consensus 319 I~DFGla~~~~ 329 (1566)
|+|||+|+...
T Consensus 156 l~DFG~a~~~~ 166 (309)
T d1u5ra_ 156 LGDFGSASIMA 166 (309)
T ss_dssp ECCCTTCBSSS
T ss_pred EEECCCCCCCC
T ss_conf 84436533467
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=1.4e-45 Score=296.81 Aligned_cols=149 Identities=13% Similarity=0.102 Sum_probs=128.4
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+.++|++++.||+|+||.||+|+++ .++..||+|++.+... .....+. +|+.+|+.++|||||+
T Consensus 27 ~~d~Y~i~~~lG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~~--~~~~~~~--------~Ei~il~~l~HpnIv~ 90 (352)
T d1koba_ 27 VYDYYDILEELGSGAFGVVHRCVEK------ATGRVFVAKFINTPYP--LDKYTVK--------NEISIMNQLHHPKLIN 90 (352)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECCSH--HHHHHHH--------HHHHHHTTCCSTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCH--HHHHHHH--------HHHHHHHHCCCCCCCC
T ss_conf 5403599899931778299999998------9997999999887264--6799999--------9999998679979891
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC--CCHHH
Q ss_conf 00110135731230248864-2221301491111201478999999999999876225567775678721011--00123
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD--SCWSW 316 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~--~~~~~ 316 (1566)
++++|.+++.+|+|||||+| +|.+.+.. ....+++..++.+++||+.||.|||++||+||||||+|||++. ++ .
T Consensus 91 ~~~~~~~~~~~~ivmE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~--~ 167 (352)
T d1koba_ 91 LHDAFEDKYEMVLILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKAS--S 167 (352)
T ss_dssp EEEEEECSSEEEEEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCC--C
T ss_pred EEEEEEECCEEEEEEECCCCCHHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCC--E
T ss_conf 99999989999999982899808888986-38998999999999999999999997792651314455311346788--4
Q ss_pred HHHCCCCCCCC
Q ss_conf 42407687776
Q 000399 317 LYICDKPLVGF 327 (1566)
Q Consensus 317 iKI~DFGla~~ 327 (1566)
+||+|||+|+.
T Consensus 168 vkL~DFGla~~ 178 (352)
T d1koba_ 168 VKIIDFGLATK 178 (352)
T ss_dssp EEECCCTTCEE
T ss_pred EEEEECCCCEE
T ss_conf 89952563034
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-45 Score=293.14 Aligned_cols=197 Identities=18% Similarity=0.185 Sum_probs=165.6
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||+||+|+++ .++..||+|.+.+.. ....+++ +|+.+|+.++|||||++
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~---~~~~~~~--------~E~~il~~l~HpnIv~~ 78 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDT---MEVEEFL--------KEAAVMKEIKHPNLVQL 78 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEG------GGTEEEEEEECCTTC---SCHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEEC------CCCEEEEEEEECCCC---CHHHHHH--------HHHHHHHHCCCCCEECC
T ss_conf 799398659820888089999999------999699999977761---0399999--------99999986799988267
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+++.+|+|||||++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 79 ~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~--~~Kl 156 (287)
T d1opja_ 79 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKV 156 (287)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEE
T ss_pred CCCEEECCEEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--CEEE
T ss_conf 75274578547876314676067775303554157999999999999978889878930576045768998999--2898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 07687776556555689999812242059863333222333644301110011001346882133677731056
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agR 393 (1566)
+|||+|+........ ...+..|++.|+|||++.+..|+..+|+|+.|++ .+..+++.
T Consensus 157 ~DFG~a~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~-------l~ell~~~ 213 (287)
T d1opja_ 157 ADFGLSRLMTGDTYT----------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL-------LWEIATYG 213 (287)
T ss_dssp CCCCCTTTCCSSSSE----------EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHH-------HHHHHTTS
T ss_pred CCCCCEEECCCCCCE----------EECCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHH-------HHHHHHCC
T ss_conf 324454653788722----------1035566546669278727999810430217899-------99998679
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=296.57 Aligned_cols=153 Identities=18% Similarity=0.214 Sum_probs=131.4
Q ss_pred HHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCC----CCHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 21001223025550313569999731026771000101113354214466221----10120217778788999874569
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES----KNFLRLIGVPSFDESSVPGCLRH 234 (1566)
Q Consensus 159 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~----~~~l~~~g~~~~rEi~iL~~l~H 234 (1566)
.+.++|++.+.||+|+||+||+|+++ .++..||+|++.+........ ..+. +|+.+|+.++|
T Consensus 7 ~i~d~Y~~~~~lG~G~fg~Vy~~~~~------~~~~~~AvK~i~~~~~~~~~~~~~~~~~~--------~E~~il~~l~H 72 (293)
T d1jksa_ 7 NVDDYYDTGEELGSGQFAVVKKCREK------STGLQYAAKFIKKRRTKSSRRGVSREDIE--------REVSILKEIQH 72 (293)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEBCSSTTCSSSBCHHHHH--------HHHHHHHHCCC
T ss_pred CCCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHHHHHH--------HHHHHHHHCCC
T ss_conf 85567798279811789599999999------99989999998756632134068999999--------99999986799
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 9831200110135731230248864-222130149111120147899999999999987622556777567872101100
Q 000399 235 PNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 235 pNIV~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~ 313 (1566)
||||++++++.+.+.+|+|||||++ +|.+++. ..+.+++..++.+++|++.||.|||+++|+||||||+|||++.++
T Consensus 73 pnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~--~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~ 150 (293)
T d1jksa_ 73 PNVITLHEVYENKTDVILILELVAGGELFDFLA--EKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN 150 (293)
T ss_dssp TTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS
T ss_pred CCCCCEEEEEEECCEEEEEEECCCCCCCCCHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCC
T ss_conf 899938899997998999998677864310010--356421557899999999998766625422113330127982589
Q ss_pred H--HHHHHCCCCCCCC
Q ss_conf 1--2342407687776
Q 000399 314 W--SWLYICDKPLVGF 327 (1566)
Q Consensus 314 ~--~~iKI~DFGla~~ 327 (1566)
. ..+||+|||+|+.
T Consensus 151 ~~~~~vkl~DfG~a~~ 166 (293)
T d1jksa_ 151 VPKPRIKIIDFGLAHK 166 (293)
T ss_dssp SSSCCEEECCCTTCEE
T ss_pred CCCCCEEECCHHHHHH
T ss_conf 8666469643344210
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.8e-45 Score=293.52 Aligned_cols=219 Identities=16% Similarity=0.204 Sum_probs=169.9
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||+||+|+++. .......||+|.+... ......++++ +|+.+|+.++|||||++
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~---~~~~~~~vavK~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~l 92 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKL---PGKREIFVAIKTLKSG-YTEKQRRDFL--------SEASIMGQFDHPNVIHL 92 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC------CCEEEEEEECCSS-CCHHHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEEEC---CCCEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 0042785698027882999999957---9978899999997844-5989999999--------99999985799888618
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++..++.+|+|||||++ +|.+++.. ..+.+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 93 ~g~~~~~~~~~iv~Ey~~~g~L~~~~~~-~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~--~~Kl 169 (299)
T d1jpaa_ 93 EGVVTKSTPVMIITEFMENGSLDSFLRQ-NDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNL--VCKV 169 (299)
T ss_dssp EEEECSSSSCEEEEECCTTEEHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEEECCCCCCEEEECC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC--CEEE
T ss_conf 9999628877999972279853002104-567999999999999999988988527983576150448988999--1998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCC-CCC
Q ss_conf 076877765565556899998122420598633332223336443011100110013468821336777310-565-577
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR-WGD 397 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs-~~d 397 (1566)
+|||+|+.......... .....+..||+.|+|||++.+..|+..+|+|+.|++ ++..++ |+. |.+
T Consensus 170 ~DFGla~~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvv-------l~el~t~g~~Pf~~ 236 (299)
T d1jpaa_ 170 SDFGLSRFLEDDTSDPT------YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIV-------MWEVMSYGERPYWD 236 (299)
T ss_dssp CCC-----------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHH-------HHHHHTTSCCTTTT
T ss_pred CCCCCCEECCCCCCCCE------EEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHH-------HHHHHHCCCCCCCC
T ss_conf 88443157567777653------650256668830038788836997861214453578-------99998679999999
Q ss_pred CCCEEECCEE
Q ss_conf 4320112356
Q 000399 398 YTFHMVMPWV 407 (1566)
Q Consensus 398 l~q~pv~Pwv 407 (1566)
.+...++..+
T Consensus 237 ~~~~~~~~~i 246 (299)
T d1jpaa_ 237 MTNQDVINAI 246 (299)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
T ss_conf 9999999999
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=297.15 Aligned_cols=152 Identities=20% Similarity=0.185 Sum_probs=129.7
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||+||+|+++ .++..||+|.+............+. +|+.+|+.++|||||++
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~ 68 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRK------SDGKILVWKELDYGSMTEAEKQMLV--------SEVNLLRELKHPNIVRY 68 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEECCTTSCHHHHHHHH--------HHHHHTTSCCCTTBCCE
T ss_pred CHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 333799679830889199999999------9997999999874657979999999--------99999997789998248
Q ss_pred CCCCCC--CCCEEEECCCCCC-CHHHHHCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CCCCCCCCCCCCCC
Q ss_conf 011013--5731230248864-222130149--1111201478999999999999876225-----56777567872101
Q 000399 241 LGLLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLG-----IAHRSVCPSNVLLT 310 (1566)
Q Consensus 241 ~~~~~~--~~~l~lV~E~~~g-sL~~~l~~~--~~~~~~~~~~~~i~~Qil~aL~yLH~~g-----IiHrDLKP~NILl~ 310 (1566)
++++.+ .+.+|+|||||++ +|.+++... .++.+++..++.++.|++.||.|||+++ |+||||||+|||++
T Consensus 69 ~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~ 148 (269)
T d2java1 69 YDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 148 (269)
T ss_dssp EEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC
T ss_pred EEEEEECCCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCC
T ss_conf 99999178998999995689993899998515457899999999999999999999997167788788586765425747
Q ss_pred CCCHHHHHHCCCCCCCCC
Q ss_conf 100123424076877765
Q 000399 311 DSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 311 ~~~~~~iKI~DFGla~~~ 328 (1566)
.++ .+||+|||+|+..
T Consensus 149 ~~~--~vkl~DFG~a~~~ 164 (269)
T d2java1 149 GKQ--NVKLGDFGLARIL 164 (269)
T ss_dssp TTS--CEEECCHHHHHHC
T ss_pred CCC--CEEEEECCCEEEC
T ss_conf 888--5798001000322
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-45 Score=291.50 Aligned_cols=149 Identities=15% Similarity=0.129 Sum_probs=128.0
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCC-CCCCHHHHCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 0012230255503135699997310267710001011133542144662-211012021777878899987-45699831
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPG-CLRHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~-~l~HpNIV 238 (1566)
+++|++.+.||+|+||+||+|+++ .++..||+|++.+...... .....+ +|..++. .++|||||
T Consensus 1 iddy~i~~~iG~G~fg~Vy~~~~~------~t~~~vAvK~i~k~~~~~~~~~~~~~--------~e~~~l~~~~~hp~Iv 66 (320)
T d1xjda_ 1 IEDFILHKMLGKGSFGKVFLAEFK------KTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLT 66 (320)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEEHHHHHHTTCHHHHH--------HHHHHHHHHTTCTTBC
T ss_pred CCCEEEEEEEECCCCCEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHHCCCCCEE
T ss_conf 997188658940878289999999------99989999998055533848999999--------9999999847999687
Q ss_pred CCCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 200110135731230248864-2221301491111201478999999999999876225567775678721011001234
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~i 317 (1566)
++++++.+++.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~yivmEy~~~g~L~~~i~--~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~--~~ 142 (320)
T d1xjda_ 67 HMFCTFQTKENLFFVMEYLNGGDLMYHIQ--SCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG--HI 142 (320)
T ss_dssp CEEEEEECSSEEEEEEECCTTCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTS--CE
T ss_pred EEEEEECCCCCEEEEEEECCCCCHHHHHH--CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCC--CE
T ss_conf 89889704983167775037980899864--047899999999999999999999868934034765404444899--63
Q ss_pred HHCCCCCCCC
Q ss_conf 2407687776
Q 000399 318 YICDKPLVGF 327 (1566)
Q Consensus 318 KI~DFGla~~ 327 (1566)
||+|||+|+.
T Consensus 143 kl~DFG~a~~ 152 (320)
T d1xjda_ 143 KIADFGMCKE 152 (320)
T ss_dssp EECCCTTCBC
T ss_pred ECCCCCHHHH
T ss_conf 0155530232
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-45 Score=290.36 Aligned_cols=207 Identities=17% Similarity=0.134 Sum_probs=164.7
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 001223025550313569999731026771000101113354214466221101202177787889998745-6998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||+||+|++.. .+.......||+|.+.... .......++ +|+.+|..+ +|||||+
T Consensus 36 ~~~~~l~~~lG~G~fG~Vy~a~~~~-~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~HpnIv~ 105 (325)
T d1rjba_ 36 RENLEFGKVLGSGAFGKVMNATAYG-ISKTGVSIQVAVKMLKEKA-DSSEREALM--------SELKMMTQLGSHENIVN 105 (325)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEES-CSSSSCEEEEEEEEECC-------CHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEECC-CCCCCCEEEEEEEEECCCC-CHHHHHHHH--------HHHHHHHHHCCCCCEEE
T ss_conf 8993970198307881999999857-8855420499999966335-878999999--------99999997158996868
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 00110135731230248864-22213014911---------------------112014789999999999998762255
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPN---------------------ALKSEWHVRFLMYQLLSAIAYLHSLGI 297 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~---------------------~~~~~~~~~~i~~Qil~aL~yLH~~gI 297 (1566)
+++++.+.+.+|+|||||++ +|.++++..+. ..+++..++.++.|++.||.|||+++|
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~I 185 (325)
T d1rjba_ 106 LLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 185 (325)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
T ss_conf 77888629958999972799959999986257775102210000122200125778999999999999999999973990
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
Q ss_conf 67775678721011001234240768777655655568999981224205986333322233364430111001100134
Q 000399 298 AHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGE 377 (1566)
Q Consensus 298 iHrDLKP~NILl~~~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~ 377 (1566)
+||||||+|||++.++ .+||+|||+|+........ ....+..||+.|||||++.+..|+..+|+|+.|+
T Consensus 186 iHRDlKp~Nill~~~~--~~Kl~DFGla~~~~~~~~~---------~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gv 254 (325)
T d1rjba_ 186 VHRDLAARNVLVTHGK--VVKICDFGLARDIMSDSNY---------VVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGI 254 (325)
T ss_dssp EETTCSGGGEEEETTT--EEEECCCGGGSCGGGCTTS---------EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred EECCCCHHCCCCCCCC--EEEEEECCCCCCCCCCCCE---------EEECCCCCCCCCCCHHHHCCCCCCCCEECCCHHH
T ss_conf 5052703214434598--2898514222204577861---------5623435787657838872799996330300039
Q ss_pred CCCCHHHHHHHHHC-CCCC
Q ss_conf 68821336777310-5655
Q 000399 378 LSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 378 Isnf~yL~~ln~~a-gRs~ 395 (1566)
+ ++..++ |+.+
T Consensus 255 i-------l~emlt~g~~P 266 (325)
T d1rjba_ 255 L-------LWEIFSLGVNP 266 (325)
T ss_dssp H-------HHHHTTTSCCS
T ss_pred H-------HHHHHHCCCCC
T ss_conf 9-------99998389999
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-44 Score=289.37 Aligned_cols=150 Identities=13% Similarity=0.087 Sum_probs=129.1
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+.++|++.+.||+|+||+||+|+++ .++..||+|.+.+... ....+. +|+.+|+.++|||||+
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~------~~~~~~AiK~i~~~~~---~~~~~~--------~Ei~il~~l~HpnIv~ 65 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVET------SSKKTYMAKFVKVKGT---DQVLVK--------KEISILNIARHRNILH 65 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECCCTH---HHHHHH--------HHHHHHHHSCCTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCC---CHHHHH--------HHHHHHHHCCCCCCCE
T ss_conf 7010588789831778399999998------9996999999757866---599999--------9999998579979890
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
++++|++++.+|+|||||+| +|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++...+|
T Consensus 66 ~~~~~~~~~~~~lvmE~~~gg~L~~~i~~-~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ik 144 (321)
T d1tkia_ 66 LHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIK 144 (321)
T ss_dssp EEEEEEETTEEEEEECCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEE
T ss_conf 98999889988999953899808899875-38999999999999999999999987699751355444344378851899
Q ss_pred HCCCCCCCC
Q ss_conf 407687776
Q 000399 319 ICDKPLVGF 327 (1566)
Q Consensus 319 I~DFGla~~ 327 (1566)
|+|||+++.
T Consensus 145 l~DFG~~~~ 153 (321)
T d1tkia_ 145 IIEFGQARQ 153 (321)
T ss_dssp ECCCTTCEE
T ss_pred ECCCCHHHC
T ss_conf 764411100
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-43 Score=282.35 Aligned_cols=150 Identities=19% Similarity=0.155 Sum_probs=124.0
Q ss_pred HHHHHCCCCCCE-EEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCC-CCC
Q ss_conf 002100122302-555031356999973102677100010111335421446622110120217778788999874-569
Q 000399 157 CSRIMTALFPIA-FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC-LRH 234 (1566)
Q Consensus 157 ~~~~~~~y~~~~-~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~-l~H 234 (1566)
...+.++|++.. .||+|+||.||+|++. .++..||+|++.+... .. +|+.++.+ .+|
T Consensus 6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~-------~~--------~E~~~~~~~~~h 64 (335)
T d2ozaa1 6 KNAIIDDYKVTSQVLGLGINGKVLQIFNK------RTQEKFALKMLQDCPK-------AR--------REVELHWRASQC 64 (335)
T ss_dssp CSCGGGTEEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEECSHH-------HH--------HHHHHHHHHTTS
T ss_pred CCCCCCCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECCCHH-------HH--------HHHHHHHHHCCC
T ss_conf 99701487981079654548699999988------9998999999897477-------99--------999999986699
Q ss_pred CCCCCCCCCCCC----CCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 983120011013----5731230248864-22213014911112014789999999999998762255677756787210
Q 000399 235 PNVAPVLGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 235 pNIV~l~~~~~~----~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl 309 (1566)
||||+++++|++ ...+|+|||||+| +|.+++.......+++..++.+++|++.||.|||++||+||||||+|||+
T Consensus 65 pnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll 144 (335)
T d2ozaa1 65 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLY 144 (335)
T ss_dssp TTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred CCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99782989995034689789999977899849999986278775799999999999999999997698644410022011
Q ss_pred CCCCH-HHHHHCCCCCCCC
Q ss_conf 11001-2342407687776
Q 000399 310 TDSCW-SWLYICDKPLVGF 327 (1566)
Q Consensus 310 ~~~~~-~~iKI~DFGla~~ 327 (1566)
+.+.. ..+||+|||+|+.
T Consensus 145 ~~~~~~~~~Kl~DFG~a~~ 163 (335)
T d2ozaa1 145 TSKRPNAILKLTDFGFAKE 163 (335)
T ss_dssp SCSSTTCCEEECCCTTCEE
T ss_pred CCCCCCCCCCCCCCCEEEE
T ss_conf 3555566311354551233
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6e-43 Score=278.86 Aligned_cols=198 Identities=17% Similarity=0.096 Sum_probs=160.5
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+. ...||||++...........++. +|+.+|..++|||||++
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~---------~~~vAvK~~~~~~~~~~~~~~~~--------~E~~~l~~l~HpnIv~~ 69 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKW---------HGDVAVKMLNVTAPTPQQLQAFK--------NEVGVLRKTRHVNILLF 69 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEES---------SSEEEEEECCCSSCCTTHHHHHH--------HHHHHHTTCCCTTBCCE
T ss_pred CCCEEEEEEEEECCCCEEEEEEE---------CCEEEEEEEECCCCCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 45189988983078858999999---------99899999973469989999999--------99999984799878645
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++. .+.+|+|||||++ +|.+++.. ....+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 70 ~~~~~-~~~~~lv~Ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~--~~Kl 145 (276)
T d1uwha_ 70 MGYST-APQLAIVTQWCEGSSLYHHLHI-IETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKI 145 (276)
T ss_dssp EEEEC-SSSCEEEEECCCEEEHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTS--SEEE
T ss_pred EEEEE-CCEEEEEEECCCCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 67971-5589999965899888999852-357899999999999999998887509995161478997981899--7887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC---CHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 076877765565556899998122420598633332223336443---0111001100134688213367773105655
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~---~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs~ 395 (1566)
+|||+|+......... ......||+.|||||++.+. .|+..+|+|+.|++ ++..++|+.+
T Consensus 146 ~DFGla~~~~~~~~~~---------~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~-------l~el~tg~~P 208 (276)
T d1uwha_ 146 GDFGLATVKSRWSGSH---------QFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIV-------LYELMTGQLP 208 (276)
T ss_dssp CCCCCSCC---------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHH-------HHHHHHSSCT
T ss_pred CCCCCEEECCCCCCCC---------CCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHH-------HHHHHHCCCC
T ss_conf 5002213335567763---------1256655743179999950568999953151635999-------9999978899
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=283.46 Aligned_cols=207 Identities=15% Similarity=0.171 Sum_probs=162.8
Q ss_pred CCCCCCE-EEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0122302-555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 162 TALFPIA-FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~-~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|.+.+ +||+|+||.||+|.++. ..++..||||.+.+.. .....++++ +|+.+|+.++|||||++
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~----~~~~~~vAvK~l~~~~-~~~~~~~~~--------~E~~il~~l~HpnIv~l 74 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRM----RKKQIDVAIKVLKQGT-EKADTEEMM--------REAQIMHQLDNPYIVRL 74 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC-------CCEEEEEEEECSSC-CHHHHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred CCEEECCCEEECCCCEEEEEEEEEC----CCCCEEEEEEEECHHC-CHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 4718878487306080999999960----8976899999988203-978999999--------99999986799888068
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+ +.+|+|||||++ +|.+++.. .+..+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~-~~~~lvmE~~~~g~L~~~l~~-~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~--~~Kl 150 (285)
T d1u59a_ 75 IGVCQA-EALMLVMEMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH--YAKI 150 (285)
T ss_dssp EEEEES-SSEEEEEECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETT--EEEE
T ss_pred EEEECC-CEEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 656036-807999980789968997521-256999999999999999987899868810576764660454688--5420
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCC-CCC
Q ss_conf 076877765565556899998122420598633332223336443011100110013468821336777310-565-577
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR-WGD 397 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs-~~d 397 (1566)
+|||+|+........ ........||+.|+|||++....++..+|+|+.|++ .+..++ |+. |.+
T Consensus 151 ~DFGla~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~-------l~E~lt~G~~Pf~~ 215 (285)
T d1u59a_ 151 SDFGLSKALGADDSY--------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVT-------MWEALSYGQKPYKK 215 (285)
T ss_dssp CCCTTCEECTTCSCE--------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHH-------HHHHHTTSCCTTTT
T ss_pred CCCHHHHCCCCCCCC--------CCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCHHH-------HHHHHHCCCCCCCC
T ss_conf 331342115543432--------113562113743358688727999954123220178-------99999389999999
Q ss_pred CCC
Q ss_conf 432
Q 000399 398 YTF 400 (1566)
Q Consensus 398 l~q 400 (1566)
.+.
T Consensus 216 ~~~ 218 (285)
T d1u59a_ 216 MKG 218 (285)
T ss_dssp CCT
T ss_pred CCH
T ss_conf 799
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-44 Score=284.48 Aligned_cols=197 Identities=17% Similarity=0.193 Sum_probs=163.1
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|++ .++..||||.+.+... ...+++ +|+.+++.++|||||++
T Consensus 4 p~~~~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~i~~~~~---~~~~~~--------~E~~~l~~l~HpnIv~~ 65 (263)
T d1sm2a_ 4 PSELTFVQEIGSGQFGLVHLGYW-------LNKDKVAIKTIREGAM---SEEDFI--------EEAEVMMKLSHPKLVQL 65 (263)
T ss_dssp CSCEEEEEEEECCSSCCEEEEEE-------TTTEEEEEEECCSSSS---CHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEE-------CCCCEEEEEEECCCCC---CHHHHH--------HHHHHHHHCCCCCCCCC
T ss_conf 69958888982088829999998-------8999999999878867---689999--------99999996689975653
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++..++.+|+||||+++ +|.+++.. ....+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 66 ~g~~~~~~~~~lv~E~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~--~~Kl 142 (263)
T d1sm2a_ 66 YGVCLEQAPICLVFEFMEHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ--VIKV 142 (263)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGG--CEEE
T ss_pred CCEECCCCCEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCC--CEEE
T ss_conf 5243159933799983699918997520-134788999999999999987765316431044315326666887--7686
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCCC
Q ss_conf 076877765565556899998122420598633332223336443011100110013468821336777310-5655
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs~ 395 (1566)
+|||+|+........ ......||+.|+|||++.+..|+..+|+|+.|++ ++..++ |+++
T Consensus 143 ~DFGla~~~~~~~~~----------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvi-------l~el~t~~~~~ 202 (263)
T d1sm2a_ 143 SDFGMTRFVLDDQYT----------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVL-------MWEVFSEGKIP 202 (263)
T ss_dssp CSCC----------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHH-------HHHHHTTSCCT
T ss_pred CCCCHHEECCCCCCE----------EECCEECCCCCCCHHHHCCCCCCCHHHHCCHHHH-------HHHHHHCCCCC
T ss_conf 553210023688733----------5043001766678578607999840332105999-------99998789888
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-44 Score=283.75 Aligned_cols=200 Identities=16% Similarity=0.169 Sum_probs=159.1
Q ss_pred EEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 25550313569999731026771000101113354214466221101202177787889998745699831200110135
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
++||+|+||.||+|..+. ...+..||+|++...........+++ +|+.+|+.++|||||++++++.+
T Consensus 13 k~iG~G~fG~Vy~~~~~~----~~~~~~vAvK~~~~~~~~~~~~~~~~--------~E~~il~~l~HpnIv~~~g~~~~- 79 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQM----KKVVKTVAVKILKNEANDPALKDELL--------AEANVMQQLDNPYIVRMIGICEA- 79 (277)
T ss_dssp EEEEECSSEEEEEEEEEC----SSSEEEEEEEEEC-----CHHHHHHH--------HHHHHHHTCCCTTBCCEEEEEES-
T ss_pred CCCCCCCCEEEEEEEECC----CCCCEEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCCCEEEEEECC-
T ss_conf 783458782999999816----97385999999880108989999999--------99999986799898527777505-
Q ss_pred CCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 731230248864-2221301491111201478999999999999876225567775678721011001234240768777
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI~DFGla~ 326 (1566)
+..|+|||||++ +|.++++ ....+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+|+
T Consensus 80 ~~~~lvmE~~~~g~L~~~l~--~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~--~~kl~DFGla~ 155 (277)
T d1xbba_ 80 ESWMLVMEMAELGPLNKYLQ--QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQH--YAKISDFGLSK 155 (277)
T ss_dssp SSEEEEEECCTTEEHHHHHH--HCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETT--EEEECCCTTCE
T ss_pred CCEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC--CCCCCCHHHHH
T ss_conf 97799997478896899975--225789999999999999997668747955677761131023567--51234134533
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCC-CCCCC
Q ss_conf 65565556899998122420598633332223336443011100110013468821336777310-565-57743
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR-WGDYT 399 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs-~~dl~ 399 (1566)
....... .........||+.|+|||++.+..|+..+|+|+.|++ .+..++ |+. |.+.+
T Consensus 156 ~~~~~~~--------~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~-------l~ellt~g~~Pf~~~~ 215 (277)
T d1xbba_ 156 ALRADEN--------YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVL-------MWEAFSYGQKPYRGMK 215 (277)
T ss_dssp ECCTTCS--------EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHH-------HHHHHTTTCCSSTTCC
T ss_pred HCCCCCC--------CCCCCCCCCCCCEECCCHHHCCCCCCCHHHHCCCHHH-------HHHHHHCCCCCCCCCC
T ss_conf 1343234--------4322445677842039166537999843443034031-------3289658999999989
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-44 Score=283.94 Aligned_cols=197 Identities=14% Similarity=0.134 Sum_probs=161.7
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|++ .++..||||++.... ....++. +|+.+|..++|||||++
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~~~~~~---~~~~~~~--------~E~~~l~~l~HpnIv~~ 73 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYY-------NGHTKVAVKSLKQGS---MSPDAFL--------AEANLMKQLQHQRLVRL 73 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEE-------TTTEEEEEEEECTTS---SCHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEECCCCCEEEEEEE-------CCCCEEEEEEECCCC---CCHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 89938867981079828999999-------999999999986476---8889999--------99999986799988578
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++. ++.+|+||||+++ +|.+++.......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 74 ~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~--~~Kl 150 (272)
T d1qpca_ 74 YAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKI 150 (272)
T ss_dssp EEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTS--CEEE
T ss_pred EEEEC-CCCEEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCC--CEEE
T ss_conf 73104-59769999957898288887514789887889999999999999999748954675642251562024--4042
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCC-CCC
Q ss_conf 0768777655655568999981224205986333322233364430111001100134688213367773105-655
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG-RRW 395 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~ag-Rs~ 395 (1566)
+|||+|+........ ......|++.|+|||++.+..|+..+|+|+.|++ ++..++| +++
T Consensus 151 ~DFGla~~~~~~~~~----------~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvv-------l~ellt~~~~~ 210 (272)
T d1qpca_ 151 ADFGLARLIEDNEYT----------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL-------LTEIVTHGRIP 210 (272)
T ss_dssp CCCTTCEECSSSCEE----------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHH-------HHHHHTTTCCS
T ss_pred CCCCCEEECCCCCCC----------CCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH-------HHHHHHCCCCC
T ss_conf 341014773588644----------2035677444458289837999824564525799-------99999689888
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=6.8e-43 Score=278.55 Aligned_cols=203 Identities=14% Similarity=0.109 Sum_probs=166.4
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCC-CHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211-01202177787889998745699831
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESK-NFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~-~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
..++|++.+.||+|+||.||+|++. .++..||+|++.+......... ++. +|+.+|+.++|||||
T Consensus 5 l~drY~i~~~lG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~--------~E~~~l~~~~hpniv 70 (277)
T d1o6ya_ 5 LSDRYELGEILGFGGMSEVHLARDL------RLHRDVAVKVLRADLARDPSFYLRFR--------REAQNAAALNHPAIV 70 (277)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSTTTTCHHHHHHHH--------HHHHHHHTCCCTTBC
T ss_pred CCCEEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 0620698689960899299999999------99989999998556646989999999--------999999856999887
Q ss_pred CCCCCCCCCC----CEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 2001101357----31230248864-222130149111120147899999999999987622556777567872101100
Q 000399 239 PVLGLLKTSG----LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 239 ~l~~~~~~~~----~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~ 313 (1566)
++++++...+ .+|+||||++| +|.+++. ..+.+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 71 ~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~--~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~ 148 (277)
T d1o6ya_ 71 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH--TEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 148 (277)
T ss_dssp CEEEEEEEECSSSEEEEEEEECCCEEEHHHHHH--HHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTS
T ss_pred CCCCEEEECCCCCCEEEEEEECCCCCEEHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 311435432688766999997788987101120--358999999999999999999999857952763467556657543
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 12342407687776556555689999812242059863333222333644301110011001346882133677731056
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agR 393 (1566)
..+|+|||.++......... .......||+.|+|||++.+..|+..+|+|+.|++ .+..++|+
T Consensus 149 --~~~l~d~~~~~~~~~~~~~~--------~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvi-------lyelltG~ 211 (277)
T d1o6ya_ 149 --AVKVMDFGIARAIADSGNSV--------TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV-------LYEVLTGE 211 (277)
T ss_dssp --CEEECCCTTCEECC------------------------TTCCHHHHTTCCCCHHHHHHHHHHH-------HHHHHHSS
T ss_pred --CCEEEHHHHHHHHCCCCCCC--------CCCCCCCCCCCCCCHHHHCCCCCCCCEECCCCHHH-------HHHHHHCC
T ss_conf --20100344432212354433--------33464257624369999839999966320265289-------99997697
Q ss_pred CC
Q ss_conf 55
Q 000399 394 RW 395 (1566)
Q Consensus 394 s~ 395 (1566)
.+
T Consensus 212 ~P 213 (277)
T d1o6ya_ 212 PP 213 (277)
T ss_dssp CS
T ss_pred CC
T ss_conf 99
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-43 Score=278.59 Aligned_cols=204 Identities=14% Similarity=0.144 Sum_probs=162.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|++.+.||+|+||.||+|..+. ........||||.+.... ......+++ +|+.+|..++|||||++
T Consensus 6 ~~~~~~~~~iG~G~fG~Vy~~~~~~--~~~~~~~~vAvK~~~~~~-~~~~~~~~~--------~E~~il~~l~H~nIv~~ 74 (283)
T d1mqba_ 6 PSCVTRQKVIGAGEFGEVYKGMLKT--SSGKKEVPVAIKTLKAGY-TEKQRVDFL--------GEAGIMGQFSHHNIIRL 74 (283)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC-----CCEEEEEEEEECTTC-CHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEEEC--CCCEEEEEEEEEEECCCC-CHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 8996861598117790999999968--998787999999988445-968999999--------99999985689878323
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+.+.+++||||+.+ ++.+++.. ..+.+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~--~~Kl 151 (283)
T d1mqba_ 75 EGVISKYKPMMIITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL--VCKV 151 (283)
T ss_dssp EEEECSSSSEEEEEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC--CEEE
T ss_pred EEEEECCCCEEEEEEECCCCCCHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCC--EEEE
T ss_conf 6778338803899972135740222102-345420899999999999854121212342576564427888998--4998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 07687776556555689999812242059863333222333644301110011001346882133677731056
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agR 393 (1566)
+|||+|+......... ....+..||+.|+|||++.+..|+..+|+|+.|++ ++..+++.
T Consensus 152 ~DFGla~~~~~~~~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvi-------l~el~t~~ 210 (283)
T d1mqba_ 152 SDFGLSRVLEDDPEAT--------YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIV-------MWEVMTYG 210 (283)
T ss_dssp CCCCC-------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHH-------HHHHHTTS
T ss_pred CCCCHHHCCCCCCCCC--------EEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHH-------HHHHHHCC
T ss_conf 4551030035787652--------67426777734348888704999973556344898-------99999679
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-42 Score=276.22 Aligned_cols=202 Identities=16% Similarity=0.184 Sum_probs=166.5
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.++||+|+||+||+|+. .++..||||.+.+.... ..+++ +|+.++..++|||||++
T Consensus 3 ~~~~~~~~~iG~G~fg~Vy~~~~-------~~~~~vAvK~l~~~~~~---~~~~~--------~Ev~~~~~l~HpnIv~~ 64 (258)
T d1k2pa_ 3 PKDLTFLKELGTGQFGVVKYGKW-------RGQYDVAIKMIKEGSMS---EDEFI--------EEAKVMMNLSHEKLVQL 64 (258)
T ss_dssp CCCCCCCCCCCEETTEEEEEEEE-------TTTEEEEEEEEESSSSC---HHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHCEEEEEEECCCCEEEEEEEE-------CCCCEEEEEEECCCCCC---HHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 69979968982078839999998-------89989999998747577---89999--------99999996689860158
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++.+++.+++||||+++ +|.+++.. ....+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||
T Consensus 65 ~g~~~~~~~~~iv~Ey~~~g~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~--~~kl 141 (258)
T d1k2pa_ 65 YGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQG--VVKV 141 (258)
T ss_dssp EEEECCSSSEEEEEECCTTEEHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCCEEEEEECCCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC--CEEE
T ss_conf 8998507816999970489938886410-246776899999999999999987546843466541358876998--4798
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCC-CCC
Q ss_conf 076877765565556899998122420598633332223336443011100110013468821336777310-565-577
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR-WGD 397 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs-~~d 397 (1566)
+|||+|+........ ......+|+.|+|||++....|+..+|+|+.|.+ .+..++ |+. |..
T Consensus 142 ~DfG~a~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~-------l~el~t~g~~Pf~~ 204 (258)
T d1k2pa_ 142 SDFGLSRYVLDDEYT----------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVL-------MWEIYSLGKMPYER 204 (258)
T ss_dssp CCCSSCCBCSSSSCC----------CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHH-------HHHHHTTSCCTTTT
T ss_pred CCCHHHEECCCCCCE----------EECCCCCCCCCCCCHHHCCCCCCCCEEECCCCHH-------HHHHHHCCCCCCCC
T ss_conf 861442023578722----------5246578877578078637998852103364324-------67397559999889
Q ss_pred CCC
Q ss_conf 432
Q 000399 398 YTF 400 (1566)
Q Consensus 398 l~q 400 (1566)
.+.
T Consensus 205 ~~~ 207 (258)
T d1k2pa_ 205 FTN 207 (258)
T ss_dssp SCH
T ss_pred CCH
T ss_conf 999
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-43 Score=277.97 Aligned_cols=197 Identities=15% Similarity=0.130 Sum_probs=161.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||+||+|++ .++..||||++..... ...++. +|+.+|+.++|||||++
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~-------~~~~~vAiK~l~~~~~---~~~~~~--------~E~~~l~~l~h~nIv~~ 77 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTW-------NGTTRVAIKTLKPGTM---SPEAFL--------QEAQVMKKLRHEKLVQL 77 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-------TTTEEEEEEECCTTSS---CHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEE-------CCCCEEEEEEECCCCC---CHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 79979846993079809999999-------9999999999880448---889999--------99999986666788689
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++. .+.+|+||||+++ +|..++.....+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||
T Consensus 78 ~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~--~~kl 154 (285)
T d1fmka3 78 YAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 154 (285)
T ss_dssp EEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG--CEEE
T ss_pred EEEEE-CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCC--CEEE
T ss_conf 99982-39759999944799435420000355305999999999999999987541143353123079998999--2998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCC-CCC
Q ss_conf 0768777655655568999981224205986333322233364430111001100134688213367773105-655
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG-RRW 395 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~ag-Rs~ 395 (1566)
+|||+|+........ ......|++.|+|||++....++..+|+|+.|++ ++..++| +++
T Consensus 155 ~DfGla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Gii-------l~el~t~~~p~ 214 (285)
T d1fmka3 155 ADFGLARLIEDNEYT----------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL-------LTELTTKGRVP 214 (285)
T ss_dssp CCCCTTC------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHH-------HHHHHTTTCCS
T ss_pred CCCCHHHHCCCCCCE----------EECCCCCCCCCCCHHHHHCCCCCCHHHHHCCHHH-------HHHHHHCCCCC
T ss_conf 442555425688733----------5245455665458089837998917741323589-------99998689999
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-42 Score=275.41 Aligned_cols=213 Identities=15% Similarity=0.142 Sum_probs=164.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|++. .....+..||+|.+... ........+. +|+.+|+.++|||||++
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~---~~~~~~~~vaik~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~l 73 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYM---SPENPALAVAIKTCKNC-TSDSVREKFL--------QEALTMRQFDHPHIVKL 73 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEC---CC--CCEEEEEEECTTT-TSHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCCEEEEEEEE---CCCCEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 899698779930788299999993---69964499999993656-6879999999--------99999986899998569
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
++++. .+.+|+||||+++ +|.+++.. ....+++..++.++.|++.||.|||+++|+||||||+||+++.++ .+||
T Consensus 74 ~~~~~-~~~~~iv~E~~~~g~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~--~~Kl 149 (273)
T d1mp8a_ 74 IGVIT-ENPVWIIMELCTLGELRSFLQV-RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND--CVKL 149 (273)
T ss_dssp EEEEC-SSSCEEEEECCTTEEHHHHHHH-TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETT--EEEE
T ss_pred EEEEE-CCEEEEEEEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 88995-3747999984069807765422-478999999999999998775230226744141026553206789--6787
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCCC-CC
Q ss_conf 076877765565556899998122420598633332223336443011100110013468821336777310-5655-77
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW-GD 397 (1566)
Q Consensus 320 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs~-~d 397 (1566)
+|||+|+........ ......||+.|+|||++.+..|+..+|+|+.|++ ++..++ |+.+ .+
T Consensus 150 ~DfG~a~~~~~~~~~----------~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvi-------l~e~lt~g~~P~~~ 212 (273)
T d1mp8a_ 150 GDFGLSRYMEDSTYY----------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVC-------MWEILMHGVKPFQG 212 (273)
T ss_dssp CC-----------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHH-------HHHHHTTSCCTTTT
T ss_pred CCCHHHEECCCCCCE----------ECCCEECCCCCCHHHHHCCCCCCCCCCCCCCHHH-------HHHHHHCCCCCCCC
T ss_conf 650342133677623----------3054005831032667516998874524442478-------99998269999888
Q ss_pred CCCEEECCE
Q ss_conf 432011235
Q 000399 398 YTFHMVMPW 406 (1566)
Q Consensus 398 l~q~pv~Pw 406 (1566)
.+...++..
T Consensus 213 ~~~~~~~~~ 221 (273)
T d1mp8a_ 213 VKNNDVIGR 221 (273)
T ss_dssp CCGGGHHHH
T ss_pred CCHHHHHHH
T ss_conf 999999999
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-42 Score=274.04 Aligned_cols=202 Identities=19% Similarity=0.171 Sum_probs=157.9
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHH----CCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 0012230255503135699997310267710001----011133542144662211012021777878899987456998
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCV----LGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~----~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
.++|++++.||+|+||+||+|++. .++. .||+|.+... ...+..++++ +|+.+|+.++|||
T Consensus 8 ~~dy~~~~~lG~G~fG~Vy~~~~~------~~~~~~~~~vavK~~~~~-~~~~~~~~~~--------~E~~~l~~l~Hpn 72 (317)
T d1xkka_ 8 ETEFKKIKVLGSGAFGTVYKGLWI------PEGEKVKIPVAIKELREA-TSPKANKEIL--------DEAYVMASVDNPH 72 (317)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEEC------C----CCEEEEEEEECC-----CTHHHHH--------HHHHHHHHCCCTT
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCC
T ss_conf 899978319820899299999995------899889899999996513-4979999999--------9999998679988
Q ss_pred CCCCCCCCCCCCCEEEECCCCC-CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 3120011013573123024886-422213014911112014789999999999998762255677756787210110012
Q 000399 237 VAPVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~lV~E~~~-gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~ 315 (1566)
||++++++.++ ..++++|++. ++|.+.+.. ....+++..++.++.|++.||.|||+++|+||||||+|||++.++
T Consensus 73 Iv~l~g~~~~~-~~~~v~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~-- 148 (317)
T d1xkka_ 73 VCRLLGICLTS-TVQLITQLMPFGCLLDYVRE-HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ-- 148 (317)
T ss_dssp BCCEEEEEESS-SEEEEEECCTTCBHHHHHHH-TSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETT--
T ss_pred EEEEEEEEECC-CEEEEEEECCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCC--
T ss_conf 81589999619-83699984268740101113-345799999999999999999999876950476212031167998--
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCC
Q ss_conf 3424076877765565556899998122420598633332223336443011100110013468821336777310-565
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 316 ~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs 394 (1566)
.+||+|||+|+......... ......||+.|+|||++.+..|+..+|+|+.|++ .+..++ |+.
T Consensus 149 ~~kl~DFGla~~~~~~~~~~---------~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvi-------l~el~t~g~~ 212 (317)
T d1xkka_ 149 HVKITDFGLAKLLGAEEKEY---------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT-------VWELMTFGSK 212 (317)
T ss_dssp EEEECCCSHHHHTTTTCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHH-------HHHHHTTSCC
T ss_pred CEEEECCCCCEECCCCCCCC---------CCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHH-------HHHHHHCCCC
T ss_conf 75860255222335444532---------2365105864467088746999835654407999-------9999977999
Q ss_pred CCC
Q ss_conf 577
Q 000399 395 WGD 397 (1566)
Q Consensus 395 ~~d 397 (1566)
+.+
T Consensus 213 p~~ 215 (317)
T d1xkka_ 213 PYD 215 (317)
T ss_dssp TTT
T ss_pred CCC
T ss_conf 999
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.5e-41 Score=265.52 Aligned_cols=203 Identities=19% Similarity=0.161 Sum_probs=162.8
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+++|++++.||+|+||+||+|++. .++..||||++...........+++ +|+.+|+.++||||+++
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~------~~~~~vAvK~i~~~~~~~~~~~~~~--------~E~~il~~l~h~nii~~ 74 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHR------KTGQKVALKKVLMENEKEGFPITAL--------REIKILQLLKHENVVNL 74 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEET------TTCCEEEEEEC----CTTSSCHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHHCCCCCCCE
T ss_conf 279889999722748299999998------9997999999842224637899999--------99999998359996606
Q ss_pred CCCCCC--------CCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 011013--------573123024886422213014911112014789999999999998762255677756787210110
Q 000399 241 LGLLKT--------SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 241 ~~~~~~--------~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~ 312 (1566)
++++.. .+.+|+|||++++.+...... ....+++..++.+++|++.||.|||++||+||||||+|||++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~-~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~ 153 (318)
T d3blha1 75 IEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRD 153 (318)
T ss_dssp EEEEEC----------CEEEEEECCCEEHHHHHTC-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT
T ss_pred EEEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHH-CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECCC
T ss_conf 76540246544445763899985357874101222-03443308999999999999988522998856767222036689
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC-CHHHCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 0123424076877765565556899998122420598633332223336443-011100110013468821336777310
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 313 ~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~-~y~~~~D~Ws~G~Isnf~yL~~ln~~a 391 (1566)
+ .+||+|||+++.......... ....+.+||+.|+|||++.+. .|+..+|+|+.|++ .+..+.
T Consensus 154 ~--~~kl~dfg~~~~~~~~~~~~~-------~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvi-------l~el~~ 217 (318)
T d3blha1 154 G--VLKLADFGLARAFSLAKNSQP-------NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCI-------MAEMWT 217 (318)
T ss_dssp S--CEEECCCTTCEECCC-----C-------CCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHH-------HHHHHH
T ss_pred C--CEEEEECCEEEECCCCCCCCC-------CCCCCEECCHHHHHHHHHCCCCCCCCHHHCCCCCCE-------EEEHHH
T ss_conf 9--687631350022355444321-------135660249787428997079998917870067864-------661744
Q ss_pred CCC
Q ss_conf 565
Q 000399 392 GRR 394 (1566)
Q Consensus 392 gRs 394 (1566)
|+.
T Consensus 218 g~~ 220 (318)
T d3blha1 218 RSP 220 (318)
T ss_dssp SSC
T ss_pred CCC
T ss_conf 879
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-42 Score=273.64 Aligned_cols=217 Identities=16% Similarity=0.113 Sum_probs=167.5
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCC-CCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622-11012021777878899987456998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|+... .......||+|++.+....... .+++. +|+.+|+.++|||||+
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~---~~~~~~~vAiK~l~~~~~~~~~~~~~~~--------~Ei~~l~~l~H~nIv~ 75 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDA---PSGKTVSVAVKCLKPDVLSQPEAMDDFI--------REVNAMHSLDHRNLIR 75 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEEC---TTSCEEEEEEEC--------CHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEECCCCEEEEEEEEEC---CCCCEEEEEEEEECHHHCCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 4891997898038883999999988---9990799999999835557989999999--------9999998689999878
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
+++++.+ ..+++||||+++ ++.+++.. ..+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 76 ~~g~~~~-~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~--~vk 151 (273)
T d1u46a_ 76 LYGVVLT-PPMKMVTELAPLGSLLDRLRK-HQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRD--LVK 151 (273)
T ss_dssp EEEEECS-SSCEEEEECCTTCBHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETT--EEE
T ss_pred EEEEEEE-CCHHEEEEEECCCCHHHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCC--CEE
T ss_conf 9877740-100114654238612544421-268999999999999999999875217875205668881565565--433
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCCC-C
Q ss_conf 4076877765565556899998122420598633332223336443011100110013468821336777310-5655-7
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW-G 396 (1566)
Q Consensus 319 I~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs~-~ 396 (1566)
|+|||+++...... .........+|+..|+|||++.+..++..+|+|+.|.+ .+..++ |+.+ .
T Consensus 152 l~DfGl~~~~~~~~--------~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvi-------l~emlt~G~~Pf~ 216 (273)
T d1u46a_ 152 IGDFGLMRALPQND--------DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVT-------LWEMFTYGQEPWI 216 (273)
T ss_dssp ECCCTTCEECCC-C--------CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHH-------HHHHHTTSCCTTT
T ss_pred ECCCHHHHHCCCCC--------CCCEECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHH-------HHHHHHCCCCCCC
T ss_conf 25611555303588--------75265476325731079999837999942156614899-------9999968999999
Q ss_pred CCCCEEECCEE
Q ss_conf 74320112356
Q 000399 397 DYTFHMVMPWV 407 (1566)
Q Consensus 397 dl~q~pv~Pwv 407 (1566)
+.+...++-++
T Consensus 217 ~~~~~~~~~~i 227 (273)
T d1u46a_ 217 GLNGSQILHKI 227 (273)
T ss_dssp TCCHHHHHHHH
T ss_pred CCCHHHHHHHH
T ss_conf 96999999999
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-41 Score=270.26 Aligned_cols=205 Identities=17% Similarity=0.157 Sum_probs=160.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 001223025550313569999731026771000101113354214466221101202177787889998745-6998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|++.. .+...+++.||+|.+.... ......+++ +|..++..+ +|+|||.
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~-~~~~~~~~~vAvK~l~~~~-~~~~~~~~~--------~e~~~l~~~~~h~~iv~ 81 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGA-THSEHRALM--------SELKILIHIGHHLNVVN 81 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEES-TTSSSCEEEEEEEEC-----CHHHHHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEECC-CCCCCCCEEEEEEEECCCC-CCHHHHHHH--------HHHHHHHHHCCCCEEEE
T ss_conf 7997984498416783999999867-7755578399999986001-717899999--------99999886149984997
Q ss_pred CCCCCCC-CCCEEEECCCCCC-CHHHHHCCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 0011013-5731230248864-2221301491--------------1112014789999999999998762255677756
Q 000399 240 VLGLLKT-SGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1566)
Q Consensus 240 l~~~~~~-~~~l~lV~E~~~g-sL~~~l~~~~--------------~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLK 303 (1566)
+++++.. ...+++|||||++ +|.++++... ...+++..++.++.|++.||.|||+++|+|||||
T Consensus 82 ~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlK 161 (299)
T d1ywna1 82 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 161 (299)
T ss_dssp EEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred EEEEECCCCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 41154047975799998458992999998536666653222023321468999999999999999998873797178677
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHH
Q ss_conf 78721011001234240768777655655568999981224205986333322233364430111001100134688213
Q 000399 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 383 (1566)
Q Consensus 304 P~NILl~~~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~y 383 (1566)
|+|||++.++ .+||+|||+|+......... ......||+.|+|||++.+..|+..+|+|+.|++
T Consensus 162 p~NILl~~~~--~~Kl~DFGla~~~~~~~~~~---------~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvi----- 225 (299)
T d1ywna1 162 ARNILLSEKN--VVKICDFGLARDIYKDPDYV---------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL----- 225 (299)
T ss_dssp GGGEEECGGG--CEEECC------CCSCTTSC---------CTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHH-----
T ss_pred CCCEEECCCC--CEEECCCCCHHHCCCCCCCC---------CCCCEEECCCCCCHHHHHCCCCCCCCCEEEHHHH-----
T ss_conf 3106577998--28984575200113566522---------2475166721020368646889966322136789-----
Q ss_pred HHHHHHHCCC
Q ss_conf 3677731056
Q 000399 384 LLFLNKLAGR 393 (1566)
Q Consensus 384 L~~ln~~agR 393 (1566)
.+..+++.
T Consensus 226 --l~ellt~~ 233 (299)
T d1ywna1 226 --LWEIFSLG 233 (299)
T ss_dssp --HHHHHTTS
T ss_pred --HHHHHHCC
T ss_conf --99998688
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.1e-42 Score=271.86 Aligned_cols=213 Identities=15% Similarity=0.126 Sum_probs=166.4
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+.+- .....++..||||++.... .....+++. +|+.+|+.++||||+++
T Consensus 12 ~~~~~~~~~lG~G~fG~Vy~a~~~~-~~~~~~~~~vAvK~i~~~~-~~~~~~~~~--------~E~~il~~l~h~niv~~ 81 (301)
T d1lufa_ 12 RNNIEYVRDIGEGAFGRVFQARAPG-LLPYEPFTMVAVKMLKEEA-SADMQADFQ--------REAALMAEFDNPNIVKL 81 (301)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEET-SSTTSSEEEEEEEECCTTC-CHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred HHHCEEEEEEEECCCEEEEEEEECC-CCCCCCCEEEEEEEECHHC-CHHHHHHHH--------HHHHHHHHCCCCCCCCC
T ss_conf 8893886798207883999999888-7657788299999988210-857999999--------99999996689976552
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 0110135731230248864-2221301491----------------------1112014789999999999998762255
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGI 297 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~----------------------~~~~~~~~~~~i~~Qil~aL~yLH~~gI 297 (1566)
++++...+.+++|||++++ +|.+++.... ...++...+..++.|++.||.|||+++|
T Consensus 82 ~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~i 161 (301)
T d1lufa_ 82 LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKF 161 (301)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 46660598038999815899299999852755421000011100121034678898999999999999998554135786
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
Q ss_conf 67775678721011001234240768777655655568999981224205986333322233364430111001100134
Q 000399 298 AHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGE 377 (1566)
Q Consensus 298 iHrDLKP~NILl~~~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~ 377 (1566)
+||||||+|||++.++ .+||+|||+|+......... ......+++.|+|||++.+..|+..+|+|+.|+
T Consensus 162 vHrDlKp~NILld~~~--~~Kl~DFGls~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gv 230 (301)
T d1lufa_ 162 VHRDLATRNCLVGENM--VVKIADFGLSRNIYSADYYK---------ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGV 230 (301)
T ss_dssp CCSCCSGGGEEECGGG--CEEECCCSCHHHHTGGGCBC-------------CCBCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred EEEEECCCCEEECCCC--CEEECCCHHHEECCCCCCCC---------CCCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHH
T ss_conf 8548840116898999--28983314421136776411---------157777676767989972688980563025236
Q ss_pred CCCCHHHHHHHHHCCC--CCCCCCCE
Q ss_conf 6882133677731056--55774320
Q 000399 378 LSNFEYLLFLNKLAGR--RWGDYTFH 401 (1566)
Q Consensus 378 Isnf~yL~~ln~~agR--s~~dl~q~ 401 (1566)
+ +++.++|. ++.+....
T Consensus 231 v-------l~ell~~~~~p~~~~~~~ 249 (301)
T d1lufa_ 231 V-------LWEIFSYGLQPYYGMAHE 249 (301)
T ss_dssp H-------HHHHHTTTCCTTTTSCHH
T ss_pred H-------HHHHHCCCCCCCCCCCHH
T ss_conf 2-------999980689999998999
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-41 Score=266.51 Aligned_cols=234 Identities=17% Similarity=0.187 Sum_probs=173.5
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHH--CCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 0012230255503135699997310267710001--01113354214466221101202177787889998745-69983
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCV--LGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~--~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
.++|++.+.||+|+||.||+|+++ .++. .||||.+... ......+++. +|+.+|..+ +||||
T Consensus 9 ~~~~~~~~~iG~G~fg~Vy~~~~~------~~~~~~~vaiK~~~~~-~~~~~~~~~~--------~E~~~l~~l~~HpnI 73 (309)
T d1fvra_ 9 WNDIKFQDVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNI 73 (309)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEE------ETTEEEEEEEEEEECC-------CHHH--------HHHHHHTTCCCCTTB
T ss_pred HHHCEEEEEEEECCCCEEEEEEEC------CCCEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCCE
T ss_conf 799688779820788289999998------9996999999997823-3857999999--------999999862289988
Q ss_pred CCCCCCCCCCCCEEEECCCCCC-CHHHHHCCC--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 1200110135731230248864-222130149--------------1111201478999999999999876225567775
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1566)
Q Consensus 238 V~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~--------------~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDL 302 (1566)
|++++++.+++.+|+||||+++ +|.++++.. ....+++..+..++.|++.||.|+|+++|+||||
T Consensus 74 v~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDl 153 (309)
T d1fvra_ 74 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDL 153 (309)
T ss_dssp CCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred EEEEEEEECCCEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 36788884187369999802898699998640355555123101234578999999999999999987663089545550
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCH
Q ss_conf 67872101100123424076877765565556899998122420598633332223336443011100110013468821
Q 000399 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 303 KP~NILl~~~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~ 382 (1566)
||+|||++.++ .+||+|||+|+....... ...+.||..|+|||.+.+..|+..+|+|+.|++
T Consensus 154 kp~NIL~~~~~--~~kl~DfG~a~~~~~~~~------------~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvi---- 215 (309)
T d1fvra_ 154 AARNILVGENY--VAKIADFGLSRGQEVYVK------------KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL---- 215 (309)
T ss_dssp SGGGEEECGGG--CEEECCTTCEESSCEECC------------C----CCTTTCCHHHHHHCEECHHHHHHHHHHH----
T ss_pred CCCEEEECCCC--CEEECCCCCCCCCCCCCC------------CCCEECCCCCCCHHHHCCCCCCCCCEEEHHHHH----
T ss_conf 52048986887--638743443224442234------------553013775555387526999962215313889----
Q ss_pred HHHHHHHHCCC-C-CCCCCCEEECCEEEE-ECCCCCCCCCCCCCCCCCCCC
Q ss_conf 33677731056-5-577432011235674-025889887864323432322
Q 000399 383 YLLFLNKLAGR-R-WGDYTFHMVMPWVID-FSTKPDENFDSGSRDLSKSKW 430 (1566)
Q Consensus 383 yL~~ln~~agR-s-~~dl~q~pv~Pwvld-~~~~~~~~~~~~~rdL~kp~~ 430 (1566)
.+..+.|. . +.+.+...++.++.. +......+.+..+++|.+.++
T Consensus 216 ---l~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl 263 (309)
T d1fvra_ 216 ---LWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCW 263 (309)
T ss_dssp ---HHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHT
T ss_pred ---HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
T ss_conf ---999983689999999999999999826888887667899999999976
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-41 Score=265.35 Aligned_cols=217 Identities=16% Similarity=0.141 Sum_probs=168.5
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHC-CCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 00122302555031356999973102-6771000101113354214466221101202177787889998745-699831
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~-~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
.++|++.+.||+|+||.||+|++... +....++..||+|++.++. ......++. +|...+..+ +|||||
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~--------~e~~~l~~~~~HpnIv 82 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLI--------SEMEMMKMIGKHKNII 82 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC-CHHHHHHHH--------HHHHHHHHHCCCTTBC
T ss_pred HHHEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCC-CHHHHHHHH--------HHHHHHHHHCCCCEEE
T ss_conf 8996970098516782899999857875556675499999988112-868899999--------9999999813999697
Q ss_pred CCCCCCCCCCCEEEECCCCCC-CHHHHHCCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 200110135731230248864-2221301491--------------1112014789999999999998762255677756
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1566)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~--------------~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLK 303 (1566)
++++++.+++.+|+||||+++ +|.++++... ...+++..++.++.|++.||.|||+++|+|||||
T Consensus 83 ~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiK 162 (299)
T d1fgka_ 83 NLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLA 162 (299)
T ss_dssp CEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred ECCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
T ss_conf 34652201886899997369990999998606776432223345743467999999999999999987663797863022
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHH
Q ss_conf 78721011001234240768777655655568999981224205986333322233364430111001100134688213
Q 000399 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 383 (1566)
Q Consensus 304 P~NILl~~~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~y 383 (1566)
|+|||++.++ .+||+|||+++.......... .....+++.|+|||++.+..|+...|+|+.|.+
T Consensus 163 p~NiLl~~~~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvv----- 226 (299)
T d1fgka_ 163 ARNVLVTEDN--VMKIADFGLARDIHHIDYYKK---------TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL----- 226 (299)
T ss_dssp GGGEEECTTC--CEEECSTTCCCCGGGCCTTCC---------CTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHH-----
T ss_pred CCCEEECCCC--CEEECCCHHHCCCCCCCCCCC---------CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH-----
T ss_conf 1022454789--767622111011355555431---------466788846632667517988825554775888-----
Q ss_pred HHHHHHHC-CCCC-CCCCCEEEC
Q ss_conf 36777310-5655-774320112
Q 000399 384 LLFLNKLA-GRRW-GDYTFHMVM 404 (1566)
Q Consensus 384 L~~ln~~a-gRs~-~dl~q~pv~ 404 (1566)
++..++ |+.+ .+.....++
T Consensus 227 --l~ell~~g~~p~~~~~~~~~~ 247 (299)
T d1fgka_ 227 --LWEIFTLGGSPYPGVPVEELF 247 (299)
T ss_dssp --HHHHHTTSCCSSTTCCHHHHH
T ss_pred --HHHHCCCCCCCCCCCCHHHHH
T ss_conf --887401798989999999999
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-40 Score=264.44 Aligned_cols=152 Identities=16% Similarity=0.165 Sum_probs=129.6
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCC--CCCCHHHHCCCCCCCCCCCCCCCCC-CCC
Q ss_conf 0012230255503135699997310267710001011133542144662--2110120217778788999874569-983
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCLRH-PNV 237 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~--~~~~~l~~~g~~~~rEi~iL~~l~H-pNI 237 (1566)
+++|++++.||+|+||+||+|++. ....++..||+|.+.+...... ....+ .+|+.+|++++| |||
T Consensus 23 l~~y~~~~~IG~G~fg~Vy~~~~~---~~~~~g~~vAvK~i~~~~~~~~~~~~~~~--------~~E~~il~~l~h~pnI 91 (322)
T d1vzoa_ 23 IENFELLKVLGTGAYGKVFLVRKI---SGHDTGKLYAMKVLKKATIVQKAKTTEHT--------RTERQVLEHIRQSPFL 91 (322)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEEC---SSTTTTCEEEEEEESEEEEEEEESSGGGC--------CCHHHHHHHHHTCTTB
T ss_pred HHCEEEEEEEECCCCEEEEEEEEC---CCCCCCCEEEEEEEEHHHHCCCHHHHHHH--------HHHHHHHHHCCCCCEE
T ss_conf 102599989832878399999987---65887948999998367721016899999--------9999999864679839
Q ss_pred CCCCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 1200110135731230248864-222130149111120147899999999999987622556777567872101100123
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~ 316 (1566)
+++++++.+...+|+||||+.+ +|.+++. ..+.+++..++.++.|++.||.|+|+++|+||||||+|||++.++ .
T Consensus 92 v~~~~~~~~~~~~~~v~e~~~~~~L~~~i~--~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~--~ 167 (322)
T d1vzoa_ 92 VTLHYAFQTETKLHLILDYINGGELFTHLS--QRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG--H 167 (322)
T ss_dssp CCEEEEEEETTEEEEEECCCCSCBHHHHHH--HHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTS--C
T ss_pred EEEEEEECCCCCEEEEEECCCCCHHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCC--C
T ss_conf 996200024873001231234117999987--304543788888899999999885149989654773201246999--8
Q ss_pred HHHCCCCCCCC
Q ss_conf 42407687776
Q 000399 317 LYICDKPLVGF 327 (1566)
Q Consensus 317 iKI~DFGla~~ 327 (1566)
+||+|||+|+.
T Consensus 168 vkL~DFG~a~~ 178 (322)
T d1vzoa_ 168 VVLTDFGLSKE 178 (322)
T ss_dssp EEESCSSEEEE
T ss_pred EEEEECCCHHH
T ss_conf 88741320222
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-40 Score=263.86 Aligned_cols=193 Identities=18% Similarity=0.177 Sum_probs=160.1
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+. .+..||+|.+++.. ..+++. +|+.+++.++|||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~--------~~~~vAvK~i~~~~----~~~~~~--------~E~~~l~~l~HpnIv~~ 65 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 65 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--------TTEEEEEEECCCCC------HHHH--------HTHHHHTTCCCTTBCCE
T ss_pred HHHEEEEEEEECCCCEEEEEEEE--------CCEEEEEEEECCHH----HHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 89948857982079808999999--------99099999988577----799999--------99999986789898549
Q ss_pred CCCCCC-CCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 011013-5731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 241 LGLLKT-SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~-~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
++++.+ .+.+|+||||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 66 ~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~--~~k 143 (262)
T d1byga_ 66 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN--VAK 143 (262)
T ss_dssp EEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTS--CEE
T ss_pred EEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECCCC--CEE
T ss_conf 878872389289999636999899998745788889999999999998523211337655366656760146899--776
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC-CCCCC
Q ss_conf 4076877765565556899998122420598633332223336443011100110013468821336777310-56557
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRWG 396 (1566)
Q Consensus 319 I~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a-gRs~~ 396 (1566)
|+|||+++...... ....++..|+|||++.+..++..+|+|+.|++ .+..++ |+.+.
T Consensus 144 l~dfg~s~~~~~~~--------------~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~i-------l~el~t~~~~p~ 201 (262)
T d1byga_ 144 VSDFGLTKEASSTQ--------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGIL-------LWEIYSFGRVPY 201 (262)
T ss_dssp ECCCCC--------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHH-------HHHHHTTSCCSC
T ss_pred ECCCCCCEECCCCC--------------CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHH-------HHHHHHCCCCCC
T ss_conf 32456003447877--------------65566646778178727988858877757999-------999997899999
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-40 Score=264.69 Aligned_cols=207 Identities=17% Similarity=0.128 Sum_probs=166.2
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 001223025550313569999731026771000101113354214466221101202177787889998745-6998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|+... ......+..||+|++.+.. ......+++ +|+.++..+ +|||||+
T Consensus 22 ~~~~~l~~~iG~G~fg~Vy~a~~~~-~~~~~~~~~vAvK~i~~~~-~~~~~~~~~--------~E~~~~~~l~~HpnIv~ 91 (311)
T d1t46a_ 22 RNRLSFGKTLGAGAFGKVVEATAYG-LIKSDAAMTVAVKMLKPSA-HLTEREALM--------SELKVLSYLGNHMNIVN 91 (311)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEES-SSSTTCEEEEEEEEECTTC-CHHHHHHHH--------HHHHHHHHHCCCTTBCC
T ss_pred HHHEEEEEEEEECCCEEEEEEEEEC-CCCCCCCEEEEEEEECCCC-CHHHHHHHH--------HHHHHHHHCCCCCCEEE
T ss_conf 8996985498206882999999806-6447788699999987424-877999999--------99999876269998878
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 00110135731230248864-2221301491----------------111201478999999999999876225567775
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~----------------~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDL 302 (1566)
+++++.+.+.+|+|||||++ +|.++++... ...+++..++.++.||+.||.|||+++++||||
T Consensus 92 ~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDL 171 (311)
T d1t46a_ 92 LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDL 171 (311)
T ss_dssp EEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCC
T ss_conf 99898319978999973799879999985356654444453322233458899999999999999999887579266624
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCH
Q ss_conf 67872101100123424076877765565556899998122420598633332223336443011100110013468821
Q 000399 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 303 KP~NILl~~~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~ 382 (1566)
||+|||++.++ .+|++|||+++........ .....+.||+.|+|||++.+..++...|+|+.|++
T Consensus 172 Kp~NIl~~~~~--~~ki~DfG~~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~---- 236 (311)
T d1t46a_ 172 AARNILLTHGR--ITKICDFGLARDIKNDSNY---------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIF---- 236 (311)
T ss_dssp SGGGEEEETTT--EEEECCCGGGSCTTSCTTS---------EECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH----
T ss_pred CCCCCCCCCCC--CCCCCCCCHHEECCCCCCC---------EEEEECCCCHHHCCHHHHCCCCCCCCCCCCCHHHH----
T ss_conf 10210000257--5210234010233678861---------58620135968767788617999974001025899----
Q ss_pred HHHHHHHHC-CCCC
Q ss_conf 336777310-5655
Q 000399 383 YLLFLNKLA-GRRW 395 (1566)
Q Consensus 383 yL~~ln~~a-gRs~ 395 (1566)
++..++ |+++
T Consensus 237 ---l~ellt~g~p~ 247 (311)
T d1t46a_ 237 ---LWELFSLGSSP 247 (311)
T ss_dssp ---HHHHHTTTCCS
T ss_pred ---HHHHHHCCCCC
T ss_conf ---99998589988
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-40 Score=261.03 Aligned_cols=196 Identities=19% Similarity=0.232 Sum_probs=162.5
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+.++|++++.||+|+||+||+|++. .++..||||++.+.........+.. +|+.+|+.++|||||+
T Consensus 15 i~~~Y~i~~~LG~G~fg~V~~~~d~------~t~~~vAvK~i~~~~~~~~~~~~~~--------~Ei~il~~l~hpnIv~ 80 (355)
T d2b1pa1 15 VLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIS 80 (355)
T ss_dssp EETTEEEEEECSCC--CEEEEEEET------TTTEEEEEEEEESTTSSHHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred ECCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCEEE
T ss_conf 3377599889621758599999999------9998999999882336979999999--------9999998648987648
Q ss_pred CCCCCCC------CCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 0011013------5731230248864222130149111120147899999999999987622556777567872101100
Q 000399 240 VLGLLKT------SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~------~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~ 313 (1566)
++++|.. ...+|+|||||.+++.+.+. ..+++..++.+++|++.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~ 156 (355)
T d2b1pa1 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_dssp CSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTC
T ss_pred EEEEEECCCCCCCCCEEEEEEECCCHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 998970256434576269998414467787650----3899999999999999999886522112456776321136544
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 12342407687776556555689999812242059863333222333644301110011001346882133677731056
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agR 393 (1566)
.+|++|||+++...... ......+|+.|+|||++.+..++..+|+|+.|++ .+..+.|+
T Consensus 157 --~~kl~df~~~~~~~~~~------------~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~-------l~ell~g~ 215 (355)
T d2b1pa1 157 --TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGEMVRHK 215 (355)
T ss_dssp --CEEECCCCC---------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHH-------HHHHHHSS
T ss_pred --CEEEECHHHHHCCCCCC------------CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCH-------HHHHHHCC
T ss_conf --31320102321146665------------5332214655558133147777877433356625-------78986598
Q ss_pred C
Q ss_conf 5
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 216 ~ 216 (355)
T d2b1pa1 216 I 216 (355)
T ss_dssp C
T ss_pred C
T ss_conf 9
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-40 Score=263.85 Aligned_cols=219 Identities=15% Similarity=0.090 Sum_probs=168.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++.. ....++..||||++.+. ...+....++ +|+.+++.++|||||++
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~-~~~~~~~~VAvK~~~~~-~~~~~~~~~~--------~E~~il~~l~h~nIv~~ 88 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGV-VKDEPETRVAIKTVNEA-ASMRERIEFL--------NEASVMKEFNCHHVVRL 88 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEE-ETTEEEEEEEEEECCTT-SCHHHHHHHH--------HHHHHGGGCCCTTBCCE
T ss_pred HHHEEEEEEEEECCCEEEEEEEECCC-CCCCCCCEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEE
T ss_conf 89918835982078818999998786-44778968999998701-2868999999--------99999997699988412
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 0110135731230248864-22213014911--------11201478999999999999876225567775678721011
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN--------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~--------~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~ 311 (1566)
++++...+..++||||+++ +|.+++..... ..++...+..++.|++.||.|||+++|+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~ 168 (308)
T d1p4oa_ 89 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 168 (308)
T ss_dssp EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECT
T ss_pred EEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEECCCCEEECC
T ss_conf 54784288106777604899889998750332113444688799999999999999999876479654328677540359
Q ss_pred CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 00123424076877765565556899998122420598633332223336443011100110013468821336777310
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 312 ~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~a 391 (1566)
++ .+||+|||+|+........ .......+++.|+|||.+.+..++..+|+|+.|++ .++.++
T Consensus 169 ~~--~~Kl~DFGla~~~~~~~~~---------~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~i-------l~El~t 230 (308)
T d1p4oa_ 169 DF--TVKIGDFGMTRDIYETDYY---------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV-------LWEIAT 230 (308)
T ss_dssp TC--CEEECCTTCCCGGGGGGCE---------EGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH-------HHHHHH
T ss_pred CC--EEEEEECCCCEECCCCCCE---------EECCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHH-------HHHHHH
T ss_conf 96--4999424542023577630---------31340231632378888736998833344437899-------999996
Q ss_pred CC--CCCCCCCEEECCEE
Q ss_conf 56--55774320112356
Q 000399 392 GR--RWGDYTFHMVMPWV 407 (1566)
Q Consensus 392 gR--s~~dl~q~pv~Pwv 407 (1566)
|+ ++.+.+...++..+
T Consensus 231 ~~~~p~~~~~~~~~~~~i 248 (308)
T d1p4oa_ 231 LAEQPYQGLSNEQVLRFV 248 (308)
T ss_dssp TSCCTTTTSCHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHH
T ss_conf 899999998999999999
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=3.5e-39 Score=255.49 Aligned_cols=206 Identities=16% Similarity=0.045 Sum_probs=162.8
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569-98312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH-PNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H-pNIV~ 239 (1566)
.++|++.+.||+|+||.||+|++. .++..||+|++...... .++. +|++.++.++| +||+.
T Consensus 4 g~~Y~i~~~iG~G~fG~Vy~a~~~------~~~~~vAvK~~~~~~~~----~~~~--------~e~~~~~~l~~~~~i~~ 65 (293)
T d1csna_ 4 GVHYKVGRRIGEGSFGVIFEGTNL------LNNQQVAIKFEPRRSDA----PQLR--------DEYRTYKLLAGCTGIPN 65 (293)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEET------TTTEEEEEEEEECCTTS----CCHH--------HHHHHHHHTTTCTTCCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCCC----HHHH--------HHHHHHHHHCCCCCCCE
T ss_conf 980699799841788299999998------89979999997502582----9999--------99999999648999877
Q ss_pred CCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH---HH
Q ss_conf 001101357312302488642221301491111201478999999999999876225567775678721011001---23
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW---SW 316 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~---~~ 316 (1566)
+++++......|+|||+++++|.+++.. ....++...+..++.|++.||.|||++||+||||||+|||++.... ..
T Consensus 66 ~~~~~~~~~~~~~vme~~~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~ 144 (293)
T d1csna_ 66 VYYFGQEGLHNVLVIDLLGPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANM 144 (293)
T ss_dssp EEEEEEETTEEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTC
T ss_pred EEEEEECCCCCEEEEEECCCCHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCCC
T ss_conf 9999601881179999648887999975-203110689999999999999999977966266771315234754344795
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 42407687776556555689999812242059863333222333644301110011001346882133677731056557
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 317 iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs~~ 396 (1566)
+||+|||+|+............ ......+.||+.|||||++.+..++..+|+|+.|++ .+..+.|+.+.
T Consensus 145 vkl~DFG~a~~~~~~~~~~~~~----~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~-------l~elltg~~Pf 213 (293)
T d1csna_ 145 IYVVDFGMVKFYRDPVTKQHIP----YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHV-------FMYFLRGSLPW 213 (293)
T ss_dssp EEECCCTTCEESBCTTTCCBCC----CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH-------HHHHHHSSCTT
T ss_pred EEECCCCEEEECCCCCCCCCEE----ECCCCCEEECHHHCCHHHHCCCCCCHHHHHHHHHHH-------HHHHHHCCCCC
T ss_conf 6872366057714676654111----024676277510267989648888869998983199-------99998698767
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.2e-39 Score=258.46 Aligned_cols=190 Identities=21% Similarity=0.290 Sum_probs=154.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 0012230255503135699997310267710001011133542144662211012021777878899987456-998312
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~ 239 (1566)
.++|++++.||+|+||+||+|++. .++..||+|++.+.. ..++. +|+.+|+.++ ||||++
T Consensus 34 ~d~y~i~~~LG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~-----~~~~~--------~Ei~il~~l~~hpnIv~ 94 (328)
T d3bqca1 34 QDDYQLVRKLGRGKYSEVFEAINI------TNNEKVVVKILKPVK-----KKKIK--------REIKILENLRGGPNIIT 94 (328)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSSC-----HHHHH--------HHHHHHHHHTTSTTBCC
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECHHH-----HHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 867189789831748199999988------999799999988899-----99999--------99999985157998767
Q ss_pred CCCCCCC--CCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 0011013--5731230248864-222130149111120147899999999999987622556777567872101100123
Q 000399 240 VLGLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~--~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~ 316 (1566)
++++|.. ...+|+|||||++ +|..+.+ .+++..++.+++||+.||.|||++||+||||||+|||++.++. .
T Consensus 95 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~-----~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~-~ 168 (328)
T d3bqca1 95 LADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHR-K 168 (328)
T ss_dssp EEEEEECTTTCSEEEEEECCCSCBGGGTTT-----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTT-E
T ss_pred EEEEEEECCCCCEEEEEEECCCCCHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCC-E
T ss_conf 999998168771268886317985899746-----8999999999999999998876433443456441237748998-3
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC-CHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 424076877765565556899998122420598633332223336443-011100110013468821336777310565
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 317 iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~-~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs 394 (1566)
+||+|||+|+....... .....+|+.|+|||++.+. .|+..+|+|+.|++ .+..+.|+.
T Consensus 169 vkl~DFG~a~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~-------l~e~~~g~~ 228 (328)
T d3bqca1 169 LRLIDWGLAEFYHPGQE------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM-------LASMIFRKE 228 (328)
T ss_dssp EEECCGGGCEECCTTCC------------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHH-------HHHHHHTCS
T ss_pred EEECCCCCCEECCCCCC------------CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-------HHHHCCCCC
T ss_conf 66415654266468874------------4432248642476102688888845232335455-------587604889
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-39 Score=258.28 Aligned_cols=199 Identities=17% Similarity=0.138 Sum_probs=156.7
Q ss_pred CEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 02555031356999973102677100010111335421446622110120217778788999874569983120011013
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 167 ~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
.++||+|+||+||+|++.. .......||||.+.+. .......+++ +|+.+|+.++|||||++++++..
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~---~~~~~~~vAvK~~~~~-~~~~~~~~~~--------~E~~~l~~l~HpnIv~~~g~~~~ 99 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLD---NDGKKIHCAVKSLNRI-TDIGEVSQFL--------TEGIIMKDFSHPNVLSLLGICLR 99 (311)
T ss_dssp EEEEEEETTEEEEEEEECC-------CEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHTCCCTTBCCCCEEEEE
T ss_pred CEEEEECCCEEEEEEEEEC---CCCEEEEEEEEEECCC-CCHHHHHHHH--------HHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 6698136880999999977---9987999999998843-6978999999--------99999986789998678678980
Q ss_pred -CCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf -5731230248864-22213014911112014789999999999998762255677756787210110012342407687
Q 000399 247 -SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 247 -~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI~DFGl 324 (1566)
++.+++|||||++ +|.+++.. .....+...+..++.|++.||.|+|+++|+||||||+|||+++++ .+||+|||+
T Consensus 100 ~~~~~~lv~E~~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~--~~kL~DFG~ 176 (311)
T d1r0pa_ 100 SEGSPLVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGL 176 (311)
T ss_dssp TTTEEEEEEECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTC--CEEECSSGG
T ss_pred CCCCEEEEEEEEECCCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCC--CEEEECCCC
T ss_conf 69943899987406741442101-345404899999999988765200336762577668757677999--889910652
Q ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCC
Q ss_conf 7765565556899998122420598633332223336443011100110013468821336777310565
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 a~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs 394 (1566)
++......... ........||..|+|||++....++...|+|+.|.+ ++..++|+.
T Consensus 177 ~~~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGiv-------l~El~t~~~ 232 (311)
T d1r0pa_ 177 ARDMYDKEFDS-------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL-------LWELMTRGA 232 (311)
T ss_dssp GCCTTTTTCCC-------TTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHH-------HHHHHTTSC
T ss_pred HHHCCCCCCCC-------CEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH-------HHHHHHCCC
T ss_conf 32255665553-------100256555645567688743799974574661999-------999997899
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=8.8e-39 Score=253.01 Aligned_cols=207 Identities=17% Similarity=0.025 Sum_probs=159.9
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+-++|++.+.||+|+||.||+|++. .++..||||++..... ..++. +|+.+++.++|+|++.
T Consensus 5 vg~rY~l~~~iG~G~fG~Vy~a~~~------~~~~~vAvK~~~~~~~----~~~~~--------~E~~i~~~l~~~~~i~ 66 (299)
T d1ckia_ 5 VGNRYRLGRKIGSGSFGDIYLGTDI------AAGEEVAIKLECVKTK----HPQLH--------IESKIYKMMQGGVGIP 66 (299)
T ss_dssp ETTTEEEEEEEEECSSSEEEEEEET------TTTEEEEEEEEESCTT----SCCHH--------HHHHHHHHSTTSTTCC
T ss_pred ECCEEEEEEEEEECCCCEEEEEEEC------CCCCEEEEEEECHHCC----CHHHH--------HHHHHHHHCCCCCCCC
T ss_conf 8888999689850788099999998------8998999999721005----88899--------9999999703899601
Q ss_pred C-CCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH-HHH
Q ss_conf 0-01101357312302488642221301491111201478999999999999876225567775678721011001-234
Q 000399 240 V-LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWL 317 (1566)
Q Consensus 240 l-~~~~~~~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~-~~i 317 (1566)
. .+++.+.+..++|||++++++.+.+.. ....+++..+..++.|++.||.|||++||+||||||+|||++..+. ..+
T Consensus 67 ~~~~~~~~~~~~~ivme~~~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~v 145 (299)
T d1ckia_ 67 TIRWCGAEGDYNVMVMELLGPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 145 (299)
T ss_dssp CEEEEEEETTEEEEEEECCCCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCE
T ss_pred EEEEEEECCCEEEEEEEECCCCHHHHHHH-CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEE
T ss_conf 79999951987789998738713332443-06887689999999999999999997994426678766064335777615
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 2407687776556555689999812242059863333222333644301110011001346882133677731056557
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 318 KI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs~~ 396 (1566)
||+|||+|+............. .......||+.|+|||++.+..++..+|+|+.|++ .+..++|+.+.
T Consensus 146 kl~DFG~a~~~~~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~-------l~el~tg~~P~ 213 (299)
T d1ckia_ 146 YIIDFGLAKKYRDARTHQHIPY----RENKNLTGTARYASINTHLGIEQSRRDDLESLGYV-------LMYFNLGSLPW 213 (299)
T ss_dssp EECCCSSCEECBCTTTCCBCCC----CBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHH-------HHHHHHSSCTT
T ss_pred EEECCCCCEECCCCCCCCCEEC----CCCCCCCCCCCCCCHHHHHCCCCCCHHHEEECCHH-------HHHHHHCCCCC
T ss_conf 6504675134255445541000----13577678735329999918998983218861778-------99998498766
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-39 Score=253.56 Aligned_cols=198 Identities=16% Similarity=0.066 Sum_probs=155.2
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.+.+.||+|+||.||+|+. ++..||||++..... .++.+. +|+..+..++|||||++
T Consensus 2 ~~~~~l~~~iG~G~fg~Vy~~~~--------~g~~vAvK~~~~~~~-----~~~~~e------~ei~~~~~~~HpnIv~~ 62 (303)
T d1vjya_ 2 ARTIVLQESIGKGRFGEVWRGKW--------RGEEVAVKIFSSREE-----RSWFRE------AEIYQTVMLRHENILGF 62 (303)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEE--------TTEEEEEEEECGGGH-----HHHHHH------HHHHTSTTCCCTTBCCE
T ss_pred CCEEEEEEEEEECCCEEEEEEEE--------CCEEEEEEEECCCCH-----HHHHHH------HHHHHHHHCCCCCCCCE
T ss_conf 86899988982078819999999--------998999999872004-----679999------99999962799868326
Q ss_pred CCCCCCCC----CEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCCCCCCCCCCC
Q ss_conf 01101357----31230248864-22213014911112014789999999999998762--------2556777567872
Q 000399 241 LGLLKTSG----LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--------LGIAHRSVCPSNV 307 (1566)
Q Consensus 241 ~~~~~~~~----~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~--------~gIiHrDLKP~NI 307 (1566)
++++.+.+ .+|+||||+++ +|.++++. ..++......++.|++.||.|+|. ++|+||||||+||
T Consensus 63 ~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~---~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NI 139 (303)
T d1vjya_ 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNI 139 (303)
T ss_dssp EEEEEEECSSSEEEEEEEECCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGE
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCHHHHHHC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCE
T ss_conf 88998379860489999964669898999865---899989999999999999999887665204689866153173135
Q ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC------CHHHCCCCCCCCCCCCC
Q ss_conf 101100123424076877765565556899998122420598633332223336443------01110011001346882
Q 000399 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM------DWHSQFNRWWRGELSNF 381 (1566)
Q Consensus 308 Ll~~~~~~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~------~y~~~~D~Ws~G~Isnf 381 (1566)
|++.++ .+||+|||+++........ .........||+.|+|||++... .++...|+|+.|++
T Consensus 140 Ll~~~~--~~Kl~DFGl~~~~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvv--- 207 (303)
T d1vjya_ 140 LVKKNG--TCCIADLGLAVRHDSATDT-------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV--- 207 (303)
T ss_dssp EECTTS--CEEECCCTTCEEEETTTTE-------ECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH---
T ss_pred EECCCC--CEEEEECCCCCCCCCCCCC-------EECCCCCEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH---
T ss_conf 786887--7688763866234677762-------0013552503547678221056545467776750122015999---
Q ss_pred HHHHHHHHHCCCCCC
Q ss_conf 133677731056557
Q 000399 382 EYLLFLNKLAGRRWG 396 (1566)
Q Consensus 382 ~yL~~ln~~agRs~~ 396 (1566)
++..++|+.+.
T Consensus 208 ----l~el~tg~~~~ 218 (303)
T d1vjya_ 208 ----FWEIARRCSIG 218 (303)
T ss_dssp ----HHHHHHTBCBT
T ss_pred ----HHHHHHCCCCC
T ss_conf ----99996289988
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=4e-35 Score=230.31 Aligned_cols=229 Identities=12% Similarity=0.146 Sum_probs=192.4
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE---EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCC
Q ss_conf 2348983022--688878878863333467667787517533---20144321373202100376027996044788532
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1279 ~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~---~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~Dg 1353 (1566)
...|.+.|.+ |+|+|.+ |++|+.|++|++||+... ...++.+|.+.|.+++|+++++++++++. +.|+
T Consensus 54 ~~~H~~~v~~~~~sp~g~~-----latg~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~--~~~~ 126 (311)
T d1nr0a1 54 YTEHSHQTTVAKTSPSGYY-----CASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGE--GRER 126 (311)
T ss_dssp ECCCSSCEEEEEECTTSSE-----EEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEEC--CSSC
T ss_pred ECCCCCCEEEEEEECCCCE-----EECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCC
T ss_conf 7478888899999489996-----72255673674663101111000013433575433233311100011112--2111
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC-EEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 0566873000012444464110021488506882-1203--672798626888579995224544445689987556445
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR-IASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1566)
Q Consensus 1354 tVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~-LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~ 1430 (1566)
.+++|++.+++....+.+|...|.+++|+|++.. +++| |++|++||.+++++...+..|
T Consensus 127 ~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~------------------ 188 (311)
T d1nr0a1 127 FGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH------------------ 188 (311)
T ss_dssp SEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCC------------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC------------------
T ss_conf 11111111111111111111111111112111012000112211111111111111111111------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCC-CCCCHHHHHHHHC
Q ss_conf 687887777654435332234660577856430011578773376179998347832566316876-6685246887621
Q 000399 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT-ELGFPSLVSAICA 1509 (1566)
Q Consensus 1431 ~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~-~v~~~~~V~sVa~ 1509 (1566)
...|+++.|+|+ ++++++|+.|+.|++||.++++.+..+..... ..+|.+.|++++|
T Consensus 189 ------------~~~i~~v~~~p~----------~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~ 246 (311)
T d1nr0a1 189 ------------TKFVHSVRYNPD----------GSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW 246 (311)
T ss_dssp ------------SSCEEEEEECTT----------SSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred ------------CCCCCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf ------------111111234764----------2212111111111000124464112221111111002465321024
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCC---EEEEEEEECC
Q ss_conf 5998544798544435787035877336776025851477402576---0467663015
Q 000399 1510 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDG---YVTKVRIISK 1565 (1566)
Q Consensus 1510 sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~---~Vt~lafsPd 1565 (1566)
+| ++++|++|+.||.|++||+++++++..+..|.. .+.++.|+++
T Consensus 247 s~-----------~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~ 294 (311)
T d1nr0a1 247 SP-----------DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQ 294 (311)
T ss_dssp CT-----------TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSS
T ss_pred CC-----------CCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCC
T ss_conf 78-----------8999999937996999999999699999799986332999995199
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-35 Score=233.36 Aligned_cols=247 Identities=16% Similarity=0.224 Sum_probs=197.6
Q ss_pred CCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE------EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCC
Q ss_conf 48983022--688878878863333467667787517533------2014432137320210037602799604478853
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS------ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1566)
Q Consensus 1281 ~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~------~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~D 1352 (1566)
.|...|++ |||+|.+ |+||+ |+.|++||+... ......+|.+.|.+++|+|++++|++|+. |
T Consensus 49 ~H~~~V~~v~fs~~g~~-----latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~----d 118 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRH-----VYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE----A 118 (337)
T ss_dssp CCSSCCCEEEECSSSSE-----EEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES----S
T ss_pred CCCCCEEEEEECCCCCE-----EEEEE-CCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC----C
T ss_conf 99992899999899999-----99997-99889977367763311687640488996899998679988988612----3
Q ss_pred CCEEEEEECCC--CCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCC----------
Q ss_conf 20566873000--0124444641100214885068821203--672798626888579995224544445----------
Q 000399 1353 GTVQKWELTRI--NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH---------- 1418 (1566)
Q Consensus 1353 gtVrIWDl~s~--~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~---------- 1418 (1566)
++|++||+... +....+.+|...|..++|++++..++++ |+.|++||+.++++......|...+.+
T Consensus 119 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~ 198 (337)
T d1gxra_ 119 STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKL 198 (337)
T ss_dssp SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 32111111111111111111111111111111111111111111111111111111111111111111101234443211
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCC
Q ss_conf -6899875564456878877776544353322346605778564300115787733761799983478325663168766
Q 000399 1419 -GGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTE 1497 (1566)
Q Consensus 1419 -~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~ 1497 (1566)
.+..++.+.+|+.+.........+...|.+++|+|+ ++.+++|+.|+.+++||+++++.... ..|
T Consensus 199 ~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~----------~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~--- 264 (337)
T d1gxra_ 199 WTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT----------GEWLAVGMESSNVEVLHVNKPDKYQL-HLH--- 264 (337)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTT----------SSEEEEEETTSCEEEEETTSSCEEEE-CCC---
T ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECCC----------CCCCCEECCCCCCCCCCCCCCCCCCC-CCC---
T ss_conf 2235665532111111000002466661579997153----------03000000256421111111110000-124---
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCC
Q ss_conf 685246887621599854479854443578703587733677602585147740257604676630159
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1498 v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPdG 1566 (1566)
...|++++|+ |+|++|++|+.||.|++||+.+++.+.... |.+.|++++|+|+|
T Consensus 265 ---~~~i~~v~~s-----------~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~ 318 (337)
T d1gxra_ 265 ---ESCVLSLKFA-----------YCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDD 318 (337)
T ss_dssp ---SSCEEEEEEC-----------TTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTS
T ss_pred ---CCCCCEEEEC-----------CCCCEEEEEECCCEEEEEECCCCCEEEECC-CCCCEEEEEEECCC
T ss_conf ---5654169998-----------999999999489969999899997999926-99987999992799
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.4e-35 Score=228.03 Aligned_cols=262 Identities=13% Similarity=0.210 Sum_probs=211.6
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCE
Q ss_conf 2348983022--688878878863333467667787517533-2014432137320210037602799604478853205
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtV 1355 (1566)
+..|++.|++ |+|++.+ |+|||.|++|++||+.++ .+.++.+|.+.|.+++|++++.++++++. ++++
T Consensus 13 L~GH~~~I~~l~~sp~~~~-----l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~----~~~~ 83 (317)
T d1vyhc1 13 LSGHRSPVTRVIFHPVFSV-----MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA----DMTI 83 (317)
T ss_dssp EECCSSCEEEEEECSSSSE-----EEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET----TSCC
T ss_pred ECCCCCCEEEEEECCCCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC----CCCC
T ss_conf 8588887689999389899-----999938992999989999799999578886777763011110111111----1110
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCC-----------CCCC
Q ss_conf 668730000124444641100214885068821203--672798626888579995224544445-----------6899
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH-----------GGSP 1422 (1566)
Q Consensus 1356 rIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~-----------~~~~ 1422 (1566)
..|+....+....+.+|...+.++.|++++..++++ |+.+++||+++++.+..+..|...... ++..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 163 (317)
T d1vyhc1 84 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 163 (317)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEECCCCCCEEEEEEC
T ss_conf 11100111111110000000000001699855776526752357511443034687167776300001667999999927
Q ss_pred CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHH----------HHHHHCCCEEEEEECCCEEEEEECCCCCEEEEE
Q ss_conf 87556445687887-7776544353322346605778----------564300115787733761799983478325663
Q 000399 1423 SSSISKINTDQVGM-LNSNTLSSGILSTAFDGNLYTC----------LHHIECVERLVVGIGNGSLRFIDINQGQKLHLW 1491 (1566)
Q Consensus 1423 ~~~i~~~~~~~~~~-~~~~~~~~~V~siafsp~~~t~----------l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l 1491 (1566)
++.+.+++...... ..+..+...+.++.++|+.... .....++..+++|+.|+.|++||.++++++.++
T Consensus 164 d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 243 (317)
T d1vyhc1 164 DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 243 (317)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCEEEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEE
T ss_conf 98299975125403478824778733799863256411103456303430258861475169978999888999688999
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCC
Q ss_conf 168766685246887621599854479854443578703587733677602585147740257604676630159
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPdG 1566 (1566)
.+| ...|.+++++| ++++|++|+.||.|++||+++++++.++.+|.+.|++++|+|+|
T Consensus 244 ~~~------~~~v~~~~~~~-----------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~ 301 (317)
T d1vyhc1 244 VGH------DNWVRGVLFHS-----------GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA 301 (317)
T ss_dssp ECC------SSCEEEEEECS-----------SSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSS
T ss_pred ECC------CCCEEEEEECC-----------CCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCC
T ss_conf 688------99879999879-----------99999999798949999999991999992899988999994999
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.8e-34 Score=226.20 Aligned_cols=227 Identities=12% Similarity=0.072 Sum_probs=143.9
Q ss_pred CCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE---EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEE
Q ss_conf 83022--688878878863333467667787517533---2014432137320210037602799604478853205668
Q 000399 1284 PWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1284 ~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~---~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIW 1358 (1566)
+.|.| |||+|.+ |++|+.|+.|++||..++ .+..+.+|.+.|++++|+|++++|+++|. |++|++|
T Consensus 8 ~pIt~~~~s~dg~~-----la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~----D~~i~vW 78 (371)
T d1k8kc_ 8 EPISCHAWNKDRTQ-----IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT----DRNAYVW 78 (371)
T ss_dssp SCCCEEEECTTSSE-----EEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET----TSCEEEE
T ss_pred CCEEEEEECCCCCE-----EEEEECCCEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEEC----CCEEEEE
T ss_conf 88389999899999-----99994889899998889978999995588998889999799999999979----9939998
Q ss_pred EECCCC--CCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 730000--124444641100214885068821203--6727986268885799952245444456899875564456878
Q 000399 1359 ELTRIN--CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1434 (1566)
Q Consensus 1359 Dl~s~~--~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~ 1434 (1566)
|+.++. +...+.+|...|.+++|+|+++.++++ |++|++|+.............
T Consensus 79 d~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~---------------------- 136 (371)
T d1k8kc_ 79 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI---------------------- 136 (371)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE----------------------
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCCCCC----------------------
T ss_conf 6203321100122322110001111111211000002576302544203343311100----------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCC------------CCCCCHH
Q ss_conf 8777765443533223466057785643001157877337617999834783256631687------------6668524
Q 000399 1435 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEP------------TELGFPS 1502 (1566)
Q Consensus 1435 ~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~------------~~v~~~~ 1502 (1566)
...+...|.+++|+|+ ++++++|+.|++|++||.............. ....|..
T Consensus 137 ----~~~~~~~v~~v~~~p~----------~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (371)
T d1k8kc_ 137 ----KKPIRSTVLSLDWHPN----------SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG 202 (371)
T ss_dssp ----CTTCCSCEEEEEECTT----------SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS
T ss_pred ----CCCCCCCCCCCCCCCC----------CCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf ----1011122211111111----------11100013476799984015764310012211111111011244047667
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCC
Q ss_conf 6887621599854479854443578703587733677602585147740257604676630159
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1503 ~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPdG 1566 (1566)
+|.+++|+ |+|+.+++|+.|+.|++||..++..+..+.+|..+|++++|+|+|
T Consensus 203 ~v~~~~~s-----------~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~ 255 (371)
T d1k8kc_ 203 WVHGVCFS-----------ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES 255 (371)
T ss_dssp CEEEEEEC-----------SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETT
T ss_pred CEEEEEEE-----------CCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCEEEEECCCC
T ss_conf 47898751-----------233210000147860588641012100000146652036546999
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.5e-35 Score=228.30 Aligned_cols=254 Identities=15% Similarity=0.244 Sum_probs=194.4
Q ss_pred CCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEH------------------HHHHCCCCCEEEEECCC
Q ss_conf 348983022--688878878863333467667787517533-201------------------44321373202100376
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILS------------------SIRAHHGALRSVAVGQD 1338 (1566)
Q Consensus 1280 ~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~------------------tl~gH~~~V~siafspd 1338 (1566)
..|++.|+| |||+|++ |++|+ |++|++||+..+ .+. ...+|...|++++|+|+
T Consensus 59 ~~H~~~V~~l~fs~dg~~-----lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 132 (388)
T d1erja_ 59 LDHTSVVCCVKFSNDGEY-----LATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 132 (388)
T ss_dssp EECSSCCCEEEECTTSSE-----EEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT
T ss_pred CCCCCCEEEEEECCCCCE-----EEEEE-CCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 799996899999999999-----99994-994899981364057663166544324432111014677898899998899
Q ss_pred CEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCC-
Q ss_conf 02799604478853205668730000124444641100214885068821203--672798626888579995224544-
Q 000399 1339 ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD- 1415 (1566)
Q Consensus 1339 g~~lvSgS~~~g~DgtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~- 1415 (1566)
++++++|+. |++|++|+...++....+.+|...|.+++|++++..++++ |+.|++||.++.........+...
T Consensus 133 ~~~l~s~~~----dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 208 (388)
T d1erja_ 133 GKFLATGAE----DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVT 208 (388)
T ss_dssp SSEEEEEET----TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred CCCCEECCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
T ss_conf 980121344----4111121111111111111111111110111111111122210156541011111100001245442
Q ss_pred ----------CCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEE
Q ss_conf ----------4456899875564456878877--------7765443533223466057785643001157877337617
Q 000399 1416 ----------SLHGGSPSSSISKINTDQVGML--------NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSL 1477 (1566)
Q Consensus 1416 ----------~~~~~~~~~~i~~~~~~~~~~~--------~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtI 1477 (1566)
.+.++..++.+.+++....... ....|...|.+++|+|+ ++++++|+.|+.|
T Consensus 209 ~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~----------~~~l~s~~~d~~i 278 (388)
T d1erja_ 209 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD----------GQSVVSGSLDRSV 278 (388)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT----------SSEEEEEETTSEE
T ss_pred CCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEECCC----------CCEEEEEECCCCE
T ss_conf 112368878758997389819996345573000102443334577898789999799----------9999999789928
Q ss_pred EEEECCCCCEEEEECCCCC------CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEE
Q ss_conf 9998347832566316876------6685246887621599854479854443578703587733677602585147740
Q 000399 1478 RFIDINQGQKLHLWRGEPT------ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1566)
Q Consensus 1478 riWDi~sg~~l~~l~~h~~------~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~ 1551 (1566)
++||++++........... ...|...|.++++ +|+|++|++|+.||.|++||+++++++.+++
T Consensus 279 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-----------s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~ 347 (388)
T d1erja_ 279 KLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT-----------TQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347 (388)
T ss_dssp EEEEC---------------CEEEEEECCSSCEEEEEE-----------CGGGCEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEE-----------CCCCCEEEEEECCCEEEEEECCCCCEEEEEE
T ss_conf 98751577643210134442001101245532789998-----------8999999999698979999999996999996
Q ss_pred CCCCEEEEEEEEC
Q ss_conf 2576046766301
Q 000399 1552 AHDGYVTKVRIIS 1564 (1566)
Q Consensus 1552 ~H~~~Vt~lafsP 1564 (1566)
+|.+.|+++++++
T Consensus 348 ~H~~~V~~~~~~~ 360 (388)
T d1erja_ 348 GHRNSVISVAVAN 360 (388)
T ss_dssp CCSSCEEEEEECS
T ss_pred CCCCCEEEEEEEC
T ss_conf 8899789999846
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.6e-34 Score=223.73 Aligned_cols=224 Identities=15% Similarity=0.195 Sum_probs=174.8
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCE
Q ss_conf 2348983022--688878878863333467667787517533-2014432137320210037602799604478853205
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtV 1355 (1566)
+..|.+.|++ |+|++.+ |+|||.|++|++||+.++ .+.++.+|.+.|.+++|+|++.++++|+. |+++
T Consensus 51 L~GH~~~I~~l~~s~~~~~-----l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~----d~~i 121 (340)
T d1tbga_ 51 LRGHLAKIYAMHWGTDSRL-----LVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL----DNIC 121 (340)
T ss_dssp ECCCSSCEEEEEECTTSSE-----EEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEET----TCCE
T ss_pred ECCCCCCEEEEEECCCCCE-----EEEEECCCCEEEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEECC----CCEE
T ss_conf 8887898889999899999-----999978995556310210257997246533775676012114431013----3201
Q ss_pred EEEEECCCC----CCCCCCCCCC-----------------------------------------CCCCEEEEECCCCEEE
Q ss_conf 668730000----1244446411-----------------------------------------0021488506882120
Q 000399 1356 QKWELTRIN----CVSGYYGHEE-----------------------------------------VVNDICVLSSSGRIAS 1390 (1566)
Q Consensus 1356 rIWDl~s~~----~i~~l~gH~~-----------------------------------------~V~sIafsp~~~~LvS 1390 (1566)
++|+..... ....+.+|.. .+....+.+....+++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (340)
T d1tbga_ 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEE
T ss_conf 01332222122211100135421101111111111111124454320012322111112331015763001244212687
Q ss_pred C--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 3--67279862688857999522454444568998755644568788777765443533223466057785643001157
Q 000399 1391 C--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL 1468 (1566)
Q Consensus 1391 g--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~L 1468 (1566)
+ |+.|++||+++++++.++.+ |...|++++|+|+ ++++
T Consensus 202 ~~~d~~v~i~d~~~~~~~~~~~~------------------------------h~~~i~~v~~~p~----------~~~l 241 (340)
T d1tbga_ 202 GACDASAKLWDVREGMCRQTFTG------------------------------HESDINAICFFPN----------GNAF 241 (340)
T ss_dssp EETTTEEEEEETTTTEEEEEECC------------------------------CSSCEEEEEECTT----------SSEE
T ss_pred EECCCEEEEEECCCCCEEEEEEC------------------------------CCCCEEEEEECCC----------CCEE
T ss_conf 60573699999999948899957------------------------------8898589999799----------8999
Q ss_pred EEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEE
Q ss_conf 87733761799983478325663168766685246887621599854479854443578703587733677602585147
Q 000399 1469 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIA 1548 (1566)
Q Consensus 1469 vsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~ 1548 (1566)
++|+.|+.|++||++....+..+.... +...+.+++++ +++.+|++|+.||.|++||+.+++++.
T Consensus 242 ~s~s~d~~i~~~~~~~~~~~~~~~~~~----~~~~i~~~~~s-----------~~~~~l~~g~~dg~i~iwd~~~~~~~~ 306 (340)
T d1tbga_ 242 ATGSDDATCRLFDLRADQELMTYSHDN----IICGITSVSFS-----------KSGRLLLAGYDDFNCNVWDALKADRAG 306 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCTT----CCSCEEEEEEC-----------SSSCEEEEEETTSCEEEEETTTCCEEE
T ss_pred EEEECCCEEEEEEECCCCCCCCCCCCC----CCCCEEEEEEC-----------CCCCEEEEEECCCEEEEEECCCCCEEE
T ss_conf 999699969997521221111111224----45745899998-----------999999999797989999999993989
Q ss_pred EEECCCCEEEEEEEECCC
Q ss_conf 740257604676630159
Q 000399 1549 SWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1549 ~l~~H~~~Vt~lafsPdG 1566 (1566)
.+.+|.+.|++++|+|+|
T Consensus 307 ~~~~H~~~V~~l~~s~d~ 324 (340)
T d1tbga_ 307 VLAGHDNRVSCLGVTDDG 324 (340)
T ss_dssp EECCCSSCEEEEEECTTS
T ss_pred EECCCCCCEEEEEEECCC
T ss_conf 984899978999990899
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=5.3e-33 Score=217.15 Aligned_cols=246 Identities=17% Similarity=0.234 Sum_probs=195.7
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE---EEHHHHHCCCCCEEEE
Q ss_conf 44311122458888973012348983022--688878878863333467667787517533---2014432137320210
Q 000399 1260 RRVYDYHKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVA 1334 (1566)
Q Consensus 1260 ~~v~~l~~~~~~~~~~~~~~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~---~l~tl~gH~~~V~sia 1334 (1566)
.+++++................|+++|.+ |+|+|.+ |++|+.|+.|++||+... ....+.+|...+.+++
T Consensus 74 V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~-----l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~ 148 (337)
T d1gxra_ 74 VKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCT-----LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALA 148 (337)
T ss_dssp EEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSE-----EEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEE
T ss_pred EEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCE-----EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 89977367763311687640488996899998679988-----9886123321111111111111111111111111111
Q ss_pred ECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECC
Q ss_conf 037602799604478853205668730000124444641100214885068821203--672798626888579995224
Q 000399 1335 VGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1412 (1566)
Q Consensus 1335 fspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h 1412 (1566)
|++++.++++++. |+.|++|++.++++.....+|...|.+++|++++..++++ |+.|++||+++++.+..+...
T Consensus 149 ~~~~~~~l~s~~~----d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~ 224 (337)
T d1gxra_ 149 ISPDSKVCFSCCS----DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFT 224 (337)
T ss_dssp ECTTSSEEEEEET----TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS
T ss_pred CCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
T ss_conf 1111111111111----111111111111111111111111110123444321122356655321111110000024666
Q ss_pred C----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEEC
Q ss_conf 5----------444456899875564456878877776544353322346605778564300115787733761799983
Q 000399 1413 S----------MDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDI 1482 (1566)
Q Consensus 1413 ~----------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi 1482 (1566)
. ...+.++..++.+.+|+.+.........|...|.+++|+|+ ++++++|+.|++|++||+
T Consensus 225 ~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~----------g~~l~s~s~Dg~i~iwd~ 294 (337)
T d1gxra_ 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYC----------GKWFVSTGKDNLLNAWRT 294 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTT----------SSEEEEEETTSEEEEEET
T ss_pred CCEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC----------CCEEEEEECCCEEEEEEC
T ss_conf 6157999715303000000256421111111110000124565416999899----------999999948996999989
Q ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC
Q ss_conf 478325663168766685246887621599854479854443578703587733677602
Q 000399 1483 NQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1483 ~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~r 1542 (1566)
.+++.+..+. | ...|.+++++ |++++|++|+.||.|++||+.
T Consensus 295 ~~~~~~~~~~-~------~~~v~~~~~s-----------~d~~~l~t~s~D~~I~vWdl~ 336 (337)
T d1gxra_ 295 PYGASIFQSK-E------SSSVLSCDIS-----------VDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp TTCCEEEEEE-C------SSCEEEEEEC-----------TTSCEEEEEETTSCEEEEEEE
T ss_pred CCCCEEEECC-C------CCCEEEEEEE-----------CCCCEEEEEECCCEEEEEEEE
T ss_conf 9997999926-9------9987999992-----------799999999089969999778
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.97 E-value=2.8e-32 Score=212.64 Aligned_cols=206 Identities=12% Similarity=0.112 Sum_probs=166.2
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCCCCCCCCC--CCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEE-EEEECCCCCCC
Q ss_conf 2348983022--6888788788633334676--67787517533-20144321373202100376027-99604478853
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGL--KDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECT-VFTAGIGPGFK 1352 (1566)
Q Consensus 1279 ~~~H~~wV~~--fSpdg~~~~~e~LaTgs~D--g~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~-lvSgS~~~g~D 1352 (1566)
...|.+.|.+ |+|++.+ +++++.+ ..+++|+++.. ...++.+|.+.|.+++|+|++++ +++|+. |
T Consensus 98 ~~~~~~~v~~v~~s~d~~~-----l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~sgs~----d 168 (311)
T d1nr0a1 98 IPVFSGPVKDISWDSESKR-----IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD----D 168 (311)
T ss_dssp EECSSSCEEEEEECTTSCE-----EEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEET----T
T ss_pred CCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC----C
T ss_conf 3433575433233311100-----011112211111111111111111111111111111112111012000112----2
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 205668730000124444641100214885068821203--672798626888579995224544445689987556445
Q 000399 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1566)
Q Consensus 1353 gtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~ 1430 (1566)
++|++||+.++++...+.+|...|++++|+|+++.++++ |+.|++||.+++..+..+....
T Consensus 169 ~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~----------------- 231 (311)
T d1nr0a1 169 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDS----------------- 231 (311)
T ss_dssp SCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTT-----------------
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----------------
T ss_conf 111111111111111111111111112347642212111111111000124464112221111-----------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf 68788777765443533223466057785643001157877337617999834783256631687666852468876215
Q 000399 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1566)
Q Consensus 1431 ~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~s 1510 (1566)
....+|...|.+++|+|+ +++|++|+.|++|++||++++++++++..+... ...+.++
T Consensus 232 ------~~~~~h~~~V~~~~~s~~----------~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~---~~~~~~~--- 289 (311)
T d1nr0a1 232 ------LKNVAHSGSVFGLTWSPD----------GTKIASASADKTIKIWNVATLKVEKTIPVGTRI---EDQQLGI--- 289 (311)
T ss_dssp ------SSSCSSSSCEEEEEECTT----------SSEEEEEETTSEEEEEETTTTEEEEEEECCSSG---GGCEEEE---
T ss_pred ------CCCCCCCCCCCCCCCCCC----------CCEEEEEECCCEEEEEECCCCCEEEEEECCCCC---CCEEEEE---
T ss_conf ------111002465321024788----------999999937996999999999699999799986---3329999---
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC
Q ss_conf 99854479854443578703587733677602
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1511 ps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~r 1542 (1566)
.+++..+++++.||.|++||..
T Consensus 290 ----------~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 290 ----------IWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp ----------EECSSCEEEEETTCCEEEEETT
T ss_pred ----------EECCCEEEEEECCCEEEEEECC
T ss_conf ----------9519999999899979999588
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=1.5e-34 Score=226.81 Aligned_cols=195 Identities=14% Similarity=0.124 Sum_probs=147.5
Q ss_pred CCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC---------
Q ss_conf 01223025550313569999731026771000101113354214466221101202177787889998745---------
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL--------- 232 (1566)
Q Consensus 162 ~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l--------- 232 (1566)
++|+++++||+|+||.||+|++. .++..||||++.+.....+ ... +|+.+++.+
T Consensus 13 ~rY~i~~~LG~G~fg~Vy~~~~~------~~g~~vAvKvi~~~~~~~~---~~~--------~Ei~~l~~l~~~~~~~~~ 75 (362)
T d1q8ya_ 13 ARYILVRKLGWGHFSTVWLAKDM------VNNTHVAMKIVRGDKVYTE---AAE--------DEIKLLQRVNDADNTKED 75 (362)
T ss_dssp TTEEEEEEEEECSSEEEEEEEET------TTTEEEEEEEECSCHHHHH---HHH--------HHHHHHHHHHHTCCSHHH
T ss_pred CCEEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEECCCCCHH---HHH--------HHHHHHHHHCCHHHHHHH
T ss_conf 85799899750778189999999------9997999999834313368---999--------999999984014555554
Q ss_pred --CCCCCCCCCCCCCCC--CCEEEECCCCC--CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCC
Q ss_conf --699831200110135--73123024886--422213014911112014789999999999998762-25567775678
Q 000399 233 --RHPNVAPVLGLLKTS--GLITSVIPKTP--YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPS 305 (1566)
Q Consensus 233 --~HpNIV~l~~~~~~~--~~l~lV~E~~~--gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKP~ 305 (1566)
.|+||+++++++... ...+++++++. +.............+++..++.++.|++.||.|||+ +||+||||||+
T Consensus 76 ~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~ 155 (362)
T d1q8ya_ 76 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 155 (362)
T ss_dssp HHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred HCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 22767647899876312565202343200035420000012234678689999999999999888764058646567705
Q ss_pred CCCCCCCCH----HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCC
Q ss_conf 721011001----2342407687776556555689999812242059863333222333644301110011001346882
Q 000399 306 NVLLTDSCW----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNF 381 (1566)
Q Consensus 306 NILl~~~~~----~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf 381 (1566)
|||++.++. ..+|++|||.|+..... .....|++.|+|||++....|+..+|+|+.|++
T Consensus 156 NIll~~~~~~~~~~~~kl~dfg~s~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i--- 218 (362)
T d1q8ya_ 156 NVLMEIVDSPENLIQIKIADLGNACWYDEH--------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACL--- 218 (362)
T ss_dssp GEEEEEEETTTTEEEEEECCCTTCEETTBC--------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHH---
T ss_pred HEEEECCCCCCCCCEEEEEECCCCCCCCCC--------------CCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHH---
T ss_conf 705630576564430567531442123445--------------422366521057132146677764320123789---
Q ss_pred HHHHHHHHHCCCC
Q ss_conf 1336777310565
Q 000399 382 EYLLFLNKLAGRR 394 (1566)
Q Consensus 382 ~yL~~ln~~agRs 394 (1566)
.+..+.|+.
T Consensus 219 ----l~el~~g~~ 227 (362)
T d1q8ya_ 219 ----IFELITGDF 227 (362)
T ss_dssp ----HHHHHHSSC
T ss_pred ----HHHHHHCCC
T ss_conf ----999987889
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=9.3e-31 Score=203.24 Aligned_cols=225 Identities=13% Similarity=0.104 Sum_probs=176.7
Q ss_pred CCCCEEC--CCC--CCCCCCCCCCCCCCCCCCCCCCEEEEE-E--------EHHHHHCCCCCEEEEECCCCEEEEEECCC
Q ss_conf 8983022--688--878878863333467667787517533-2--------01443213732021003760279960447
Q 000399 1282 CEPWFWF--PTP--AASWDGPDFLGRVGGLKDESPWKIKAS-I--------LSSIRAHHGALRSVAVGQDECTVFTAGIG 1348 (1566)
Q Consensus 1282 H~~wV~~--fSp--dg~~~~~e~LaTgs~Dg~I~iWdi~~~-~--------l~tl~gH~~~V~siafspdg~~lvSgS~~ 1348 (1566)
|...|++ |+| +|.+ |+||+.|++|++||+... . ...+..|.+.|.+++|++++.++++++.
T Consensus 62 ~~~~v~~v~fsP~~~g~~-----lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~- 135 (325)
T d1pgua1 62 GSSVVTTVKFSPIKGSQY-----LCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE- 135 (325)
T ss_dssp TTSCEEEEEECSSTTCCE-----EEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEEC-
T ss_pred CCCCEEEEEEEECCCCCE-----EEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEC-
T ss_conf 999889999811799979-----99994899779854058862156510025411365673779998999882201001-
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCC-EEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCC
Q ss_conf 885320566873000012444464110021488506882-1203--6727986268885799952245444456899875
Q 000399 1349 PGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGR-IASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1425 (1566)
Q Consensus 1349 ~g~DgtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~-LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~ 1425 (1566)
+.|+.+++|+..+++++..+.+|...|++++|++++.. ++++ |+.|++||...++....+..+.
T Consensus 136 -~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~------------ 202 (325)
T d1pgua1 136 -GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH------------ 202 (325)
T ss_dssp -CSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS------------
T ss_pred -CCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCC------------
T ss_conf -2440478885023311001200123432111123432068886211122111122110000000015------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf 56445687887777654435332234660577856430011578773376179998347832566316876668524688
Q 000399 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1505 (1566)
Q Consensus 1426 i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~ 1505 (1566)
.+...|.+++|+|+. +.++++|+.|+.|++||+++++++..+.+|... +.
T Consensus 203 ---------------~~~~~v~~v~~~pd~---------~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~------v~ 252 (325)
T d1pgua1 203 ---------------KQGSFVRDVEFSPDS---------GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEP------VQ 252 (325)
T ss_dssp ---------------CTTCCEEEEEECSTT---------CCEEEEEETTCCEEEEETTTCCEEEECCBTTBC------CC
T ss_pred ---------------CCCCCCEEEEECCCC---------CEECCCCCCCCCEEEEEECCCCCCCCCCCCCCC------CC
T ss_conf ---------------777752776303453---------100001123321013430012221111111111------11
Q ss_pred HHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCE--EEEEEEE
Q ss_conf 762159985447985444357870358773367760258514774025760--4676630
Q 000399 1506 AICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY--VTKVRII 1563 (1566)
Q Consensus 1506 sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~--Vt~lafs 1563 (1566)
++.++.. .++|++|++|+.|+.|++||+++++++..+..|... +..+++.
T Consensus 253 ~~~~s~~--------~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (325)
T d1pgua1 253 GGIFALS--------WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV 304 (325)
T ss_dssp SCEEEEE--------ESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred CCEEEEE--------CCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEE
T ss_conf 1000000--------368999999958993999999999788999954874067699999
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.97 E-value=2.2e-30 Score=200.86 Aligned_cols=205 Identities=14% Similarity=0.115 Sum_probs=133.0
Q ss_pred CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-------------------EEHHHHHCCCCCEEEEECCCCEEE
Q ss_conf 8983022688878878863333467667787517533-------------------201443213732021003760279
Q 000399 1282 CEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-------------------ILSSIRAHHGALRSVAVGQDECTV 1342 (1566)
Q Consensus 1282 H~~wV~~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-------------------~l~tl~gH~~~V~siafspdg~~l 1342 (1566)
+..|..++++++.......+++++.|+++++|++... .......+...+.+++|+|++ ++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~l 198 (393)
T d1sq9a_ 120 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 198 (393)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EE
T ss_pred CCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCEECCCCEECCCCCCCCEEEEEECCCC-EE
T ss_conf 96689998447886542179998389819998740477534102331032000145100025789867899978999-89
Q ss_pred EEECCCCCCCCCEEEEEECCCCCCC------CCCCCCCCCCCEEEEECCCCEEEC--CC---CEEEEECCCCCEEEEEEC
Q ss_conf 9604478853205668730000124------444641100214885068821203--67---279862688857999522
Q 000399 1343 FTAGIGPGFKGTVQKWELTRINCVS------GYYGHEEVVNDICVLSSSGRIASC--DG---TLHVWNSQTGKLLSVFAE 1411 (1566)
Q Consensus 1343 vSgS~~~g~DgtVrIWDl~s~~~i~------~l~gH~~~V~sIafsp~~~~LvSg--Dg---tI~IWD~~tg~~i~~l~~ 1411 (1566)
++|+. |++|++||+.+++++. .+.+|..+|++++|+|+++.++++ |+ .|++||+.+++++..+..
T Consensus 199 asgs~----Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~ 274 (393)
T d1sq9a_ 199 ATGFN----NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 274 (393)
T ss_dssp EEECT----TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECB
T ss_pred EEEEC----CCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEECC
T ss_conf 99938----98299986023321100001111124256387700466532011242898842100103532134443115
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEE
Q ss_conf 45444456899875564456878877776544353322346605778564300115787733761799983478325663
Q 000399 1412 QSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW 1491 (1566)
Q Consensus 1412 h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l 1491 (1566)
.... ........+|...|++++|+|+ +++|++|+.|++|++||+.+++++.++
T Consensus 275 ~~~~-----------------~~~~~~~~gH~~~V~~l~fspd----------~~~l~S~s~D~~v~vWd~~~g~~~~~l 327 (393)
T d1sq9a_ 275 PTHS-----------------SQASLGEFAHSSWVMSLSFNDS----------GETLCSAGWDGKLRFWDVKTKERITTL 327 (393)
T ss_dssp C-------------------------CCBSBSSCEEEEEECSS----------SSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred CCCC-----------------CCCEEEEECCCCCEEEECCCCC----------CCEEEEECCCCEEEEEECCCCCEEEEE
T ss_conf 6666-----------------4310232023586660013898----------880698779998999999999799999
Q ss_pred CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 1687666852468876215998544798544435787035
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1531 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs 1531 (1566)
++|...+. .....+ +++++|..+++++
T Consensus 328 ~gH~~~v~--~~~~~~-----------~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 328 NMHCDDIE--IEEDIL-----------AVDEHGDSLAEPG 354 (393)
T ss_dssp ECCGGGCS--SGGGCC-----------CBCTTSCBCSSCC
T ss_pred CCCCCCCC--CCCCEE-----------EECCCCCEEEECC
T ss_conf 88687613--773489-----------9999999999831
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.2e-30 Score=197.71 Aligned_cols=249 Identities=18% Similarity=0.311 Sum_probs=176.5
Q ss_pred CCCCCCCEE-CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEE
Q ss_conf 234898302-2688878878863333467667787517533-20144321373202100376027996044788532056
Q 000399 1279 LMKCEPWFW-FPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1279 ~~~H~~wV~-~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVr 1356 (1566)
+..|++.|. +++++|++ |+|||.|++|++||+.++ +++++.+|.+.|.+++|+++ ++++++. |++++
T Consensus 12 l~GH~~~V~s~~~~~g~~-----l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~----D~~~~ 80 (342)
T d2ovrb2 12 LKGHDDHVITCLQFCGNR-----IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGST----DRTLK 80 (342)
T ss_dssp EECSTTSCEEEEEEETTE-----EEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEET----TSCEE
T ss_pred ECCCCCCEEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCC--CCCCCEE----CCCCC
T ss_conf 888687509999978999-----999918990999989999799999488999899994798--6321000----00111
Q ss_pred EEEECCCCCCCCCCCCCCCC--------------------------------------CCEEEEECCCCEEEC--CCCEE
Q ss_conf 68730000124444641100--------------------------------------214885068821203--67279
Q 000399 1357 KWELTRINCVSGYYGHEEVV--------------------------------------NDICVLSSSGRIASC--DGTLH 1396 (1566)
Q Consensus 1357 IWDl~s~~~i~~l~gH~~~V--------------------------------------~sIafsp~~~~LvSg--DgtI~ 1396 (1566)
+|+............+...+ ....+......++.+ |+.|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 160 (342)
T d2ovrb2 81 VWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK 160 (342)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred CCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEECCCCCEEEEECCCCEEE
T ss_conf 11111000000012333047652024652212344403787403556300111001111000001333024335898699
Q ss_pred EEECCCCCEEEEEECCCCC---------CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHCCC
Q ss_conf 8626888579995224544---------44568998755644568788777-7654435332234660577856430011
Q 000399 1397 VWNSQTGKLLSVFAEQSMD---------SLHGGSPSSSISKINTDQVGMLN-SNTLSSGILSTAFDGNLYTCLHHIECVE 1466 (1566)
Q Consensus 1397 IWD~~tg~~i~~l~~h~~~---------~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~V~siafsp~~~t~l~~s~dg~ 1466 (1566)
+||.+.+.++..+.+|... .+.+++.++.+.+|+.+...... ...|...+.+++++ ++
T Consensus 161 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~------------~~ 228 (342)
T d2ovrb2 161 VWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK------------DN 228 (342)
T ss_dssp EEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE------------TT
T ss_pred EEECCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCCCEEEEECC------------CC
T ss_conf 952523436678727544421006899999999589939995255653656741665320577068------------99
Q ss_pred EEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCE
Q ss_conf 57877337617999834783256631687666852468876215998544798544435787035877336776025851
Q 000399 1467 RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV 1546 (1566)
Q Consensus 1467 ~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~ 1546 (1566)
++++|+.|+.|++||....+....+..+.. |...+.++. +++.++++|+.||.|++||+++|+.
T Consensus 229 ~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~-------------~~~~~~~s~s~Dg~i~iwd~~tg~~ 292 (342)
T d2ovrb2 229 ILVSGNADSTVKIWDIKTGQCLQTLQGPNK---HQSAVTCLQ-------------FNKNFVITSSDDGTVKLWDLKTGEF 292 (342)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECSTTS---CSSCEEEEE-------------ECSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEECCCCEEEEEECCCCCCCCCCCCCCE---EEECEEECC-------------CCCCEEEEECCCCEEEEEECCCCCE
T ss_conf 999974898899986554422111221000---110100001-------------3798449990899899999999979
Q ss_pred EEEEE-----CCCCEEEEEEEECCC
Q ss_conf 47740-----257604676630159
Q 000399 1547 IASWR-----AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1547 i~~l~-----~H~~~Vt~lafsPdG 1566 (1566)
++.+. +|.+.|++++|+|+|
T Consensus 293 i~~~~~~~~~~~~~~v~~v~~s~~~ 317 (342)
T d2ovrb2 293 IRNLVTLESGGSGGVVWRIRASNTK 317 (342)
T ss_dssp EEEEEECTTGGGTCEEEEEEECSSE
T ss_pred EEEEECCCCCCCCCCEEEEEECCCC
T ss_conf 8998623478988978999987999
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.96 E-value=4.3e-29 Score=192.93 Aligned_cols=215 Identities=14% Similarity=0.033 Sum_probs=162.2
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE---EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCC
Q ss_conf 2348983022--688878878863333467667787517533---20144321373202100376027996044788532
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1279 ~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~---~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~Dg 1353 (1566)
...|.+.|++ |+|++.+ |+|||.|+++++||+.+. ....+.+|...|.+++|+|+++.+++++. |+
T Consensus 47 l~gH~~~V~~l~fsp~~~~-----l~s~s~D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~----d~ 117 (371)
T d1k8kc_ 47 LKEHNGQVTGVDWAPDSNR-----IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG----SR 117 (371)
T ss_dssp EECCSSCEEEEEEETTTTE-----EEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET----TS
T ss_pred ECCCCCCEEEEEECCCCCE-----EEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC----CC
T ss_conf 5588998889999799999-----99997999399986203321100122322110001111111211000002----57
Q ss_pred CEEEEEECCCCC----CCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 056687300001----24444641100214885068821203--672798626888579995224544445689987556
Q 000399 1354 TVQKWELTRINC----VSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1354 tVrIWDl~s~~~----i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~ 1427 (1566)
++++|++..... .....+|...|.+++|+|++..++++ |++|++||...+.......... .
T Consensus 118 ~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~-------------~ 184 (371)
T d1k8kc_ 118 VISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP-------------W 184 (371)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBT-------------T
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCC-------------C
T ss_conf 630254420334331110010111222111111111110001347679998401576431001221-------------1
Q ss_pred CCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf 4456-878877776544353322346605778564300115787733761799983478325663168766685246887
Q 000399 1428 KINT-DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1566)
Q Consensus 1428 ~~~~-~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~s 1506 (1566)
.... ..........+...|.+++|+|+ ++++++++.|++|++||+.+++.+..+..| ..+|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~----------g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~------~~~v~s 248 (371)
T d1k8kc_ 185 GSKMPFGELMFESSSSCGWVHGVCFSAN----------GSRVAWVSHDSTVCLADADKKMAVATLASE------TLPLLA 248 (371)
T ss_dssp BSCCCTTCEEEECCCCSSCEEEEEECSS----------SSEEEEEETTTEEEEEEGGGTTEEEEEECS------SCCEEE
T ss_pred CCCCCCEEEEEECCCCCCCEEEEEEECC----------CCCCCCCCCCCCCEEEEEECCCCEEEEECC------CCCCEE
T ss_conf 1111110112440476674789875123----------321000014786058864101210000014------665203
Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECC
Q ss_conf 6215998544798544435787035877336776025
Q 000399 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS 1543 (1566)
Q Consensus 1507 Va~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rt 1543 (1566)
++|+ +++.++++|+ |+.+++|+...
T Consensus 249 ~~fs-----------~d~~~la~g~-d~~~~~~~~~~ 273 (371)
T d1k8kc_ 249 VTFI-----------TESSLVAAGH-DCFPVLFTYDS 273 (371)
T ss_dssp EEEE-----------ETTEEEEEET-TSSCEEEEEET
T ss_pred EEEC-----------CCCCEEEEEC-CCCEEEEEEEC
T ss_conf 6546-----------9997999981-99267877608
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2e-30 Score=201.14 Aligned_cols=260 Identities=16% Similarity=0.203 Sum_probs=155.7
Q ss_pred CCCCCCCE-ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEE-EEEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEE
Q ss_conf 23489830-2268887887886333346766778751753-320144321373202100376027996044788532056
Q 000399 1279 LMKCEPWF-WFPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1279 ~~~H~~wV-~~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~-~~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVr 1356 (1566)
+..|.+.| .|+++++.+ |+||+.|++|++||+.+ ..+.++.+|.+.|.+++|++++ ++++|+. |++|+
T Consensus 8 L~GH~~~vitc~~~~~~~-----l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~-~l~s~s~----D~~i~ 77 (355)
T d1nexb2 8 LRGHMTSVITCLQFEDNY-----VITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST----DRTVR 77 (355)
T ss_dssp EECCSSSCEEEEEEETTE-----EEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEETTT-EEEEEET----TCCEE
T ss_pred ECCCCCCCEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCC-EEEEEEC----CCCCC
T ss_conf 898378869999988999-----9999189909999899993999997899988999986999-9999964----52443
Q ss_pred EEEECCCCCCCCCC--CCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCC------------------
Q ss_conf 68730000124444--641100214885068821203--67279862688857999522454------------------
Q 000399 1357 KWELTRINCVSGYY--GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM------------------ 1414 (1566)
Q Consensus 1357 IWDl~s~~~i~~l~--gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~------------------ 1414 (1566)
+|+....++..... .+...+....+.+++..++++ |++|++||+.++...........
T Consensus 78 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (355)
T d1nexb2 78 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 157 (355)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEE
T ss_conf 21111111111110011111111111112322045543888689998567730012465200010000011234012101
Q ss_pred --------------CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEE
Q ss_conf --------------44456899875564456878877-776544353322346605778564300115787733761799
Q 000399 1415 --------------DSLHGGSPSSSISKINTDQVGML-NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRF 1479 (1566)
Q Consensus 1415 --------------~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIri 1479 (1566)
.....+..+..+..|+....... ....+...+.++.+++. ++.+++++.|++|++
T Consensus 158 ~~~~~~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~d~~i~i 227 (355)
T d1nexb2 158 RGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE----------RKRCISASMDTTIRI 227 (355)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT----------TTEEEEEETTSCEEE
T ss_pred EECCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCC----------CEEEECCCCCCEEEE
T ss_conf 1002221000025633442114420444301311000110001233211111121----------002101245636876
Q ss_pred EECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC----------------------------CCCCCCCCCCHHHHHHCC
Q ss_conf 9834783256631687666852468876215998----------------------------544798544435787035
Q 000399 1480 IDINQGQKLHLWRGEPTELGFPSLVSAICACGSE----------------------------KMQAGGAVASPSWIAAGL 1531 (1566)
Q Consensus 1480 WDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~----------------------------~~~~~~~spdG~~LaSGs 1531 (1566)
||.+++..+..+.+|... |.++++++.. ......+++++.++++|
T Consensus 228 ~d~~~~~~~~~~~~h~~~------v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g- 300 (355)
T d1nexb2 228 WDLENGELMYTLQGHTAL------VGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSG- 300 (355)
T ss_dssp EETTTCCEEEEECCCSSC------CCEEEECSSEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEECSSEEEEE-
T ss_pred EECCCCCCCCCCCCCCCC------CCCCCCCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEE-
T ss_conf 301221111111111111------1111232100333201111111111111100012468822999984999899998-
Q ss_pred CCCCEEEEEECCCCEEE-EEECCCCEEEEEEEECC
Q ss_conf 87733677602585147-74025760467663015
Q 000399 1532 SSGQCRLFDVRSGNVIA-SWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1532 ~Dg~I~iWD~rtg~~i~-~l~~H~~~Vt~lafsPd 1565 (1566)
+||.|++||+++|+++. .+.+|.+.|++++|+|+
T Consensus 301 ~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~ 335 (355)
T d1nexb2 301 SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK 335 (355)
T ss_dssp ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT
T ss_pred ECCEEEEEECCCCCEEEEEECCCCCCEEEEEECCC
T ss_conf 09979999999997988884589998999998399
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1e-29 Score=196.72 Aligned_cols=237 Identities=19% Similarity=0.245 Sum_probs=177.0
Q ss_pred HHCCCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCC
Q ss_conf 3012348983022--688878878863333467667787517533-2014432137320210037602799604478853
Q 000399 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1566)
Q Consensus 1276 ~~~~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~D 1352 (1566)
......|..+|++ |+|+|.+ |++|+.|+.|++|+.... .+..+.+|.+.|.+++|++++..+++++. |
T Consensus 114 ~~~~~~~~~~V~~l~~s~~~~~-----l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~----~ 184 (388)
T d1erja_ 114 TSSSPSSDLYIRSVCFSPDGKF-----LATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG----D 184 (388)
T ss_dssp -----CCCCBEEEEEECTTSSE-----EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET----T
T ss_pred CCCCCCCCCCEEEEEECCCCCC-----CEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----C
T ss_conf 1014677898899998899980-----121344411112111111111111111111111011111111112221----0
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEEEE-CCCCEEEC--CCCEEEEECCCCCEEEEEEC-------CCCC-------
Q ss_conf 2056687300001244446411002148850-68821203--67279862688857999522-------4544-------
Q 000399 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIASC--DGTLHVWNSQTGKLLSVFAE-------QSMD------- 1415 (1566)
Q Consensus 1353 gtVrIWDl~s~~~i~~l~gH~~~V~sIafsp-~~~~LvSg--DgtI~IWD~~tg~~i~~l~~-------h~~~------- 1415 (1566)
+.+++||..+..+......+...+ ++.+.+ ++..++++ |+.|++||.+++.....+.. |...
T Consensus 185 ~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 263 (388)
T d1erja_ 185 RTVRIWDLRTGQCSLTLSIEDGVT-TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT 263 (388)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEE-EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC
T ss_pred EEEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEEC
T ss_conf 156541011111100001245442-1123688787589973898199963455730001024433345778987899997
Q ss_pred ----CCCCCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEE
Q ss_conf ----44568998755644568788777-------------7654435332234660577856430011578773376179
Q 000399 1416 ----SLHGGSPSSSISKINTDQVGMLN-------------SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1566)
Q Consensus 1416 ----~~~~~~~~~~i~~~~~~~~~~~~-------------~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIr 1478 (1566)
.+.+++.++.+.+|+........ ...|...|.+++|+|+ ++++++|+.||+|+
T Consensus 264 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----------~~~l~sg~~dg~i~ 333 (388)
T d1erja_ 264 RDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN----------DEYILSGSKDRGVL 333 (388)
T ss_dssp TTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG----------GCEEEEEETTSEEE
T ss_pred CCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCC----------CCEEEEEECCCEEE
T ss_conf 99999999978992898751577643210134442001101245532789998899----------99999996989799
Q ss_pred EEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECC
Q ss_conf 99834783256631687666852468876215998544798544435787035877336776025
Q 000399 1479 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS 1543 (1566)
Q Consensus 1479 iWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rt 1543 (1566)
+||+++++++.++.+|.+ .|.++++.+. ..++|++.+|+||+.||.|++||++.
T Consensus 334 vwd~~~~~~~~~l~~H~~------~V~~~~~~~~-----~~~spd~~~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 334 FWDKKSGNPLLMLQGHRN------SVISVAVANG-----SSLGPEYNVFATGSGDCKARIWKYKK 387 (388)
T ss_dssp EEETTTCCEEEEEECCSS------CEEEEEECSS-----CTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEECCCCCEEEEEECCCC------CEEEEEEECC-----CCCCCCCCEEEEEECCCEEEEEEEEE
T ss_conf 999999969999968899------7899998467-----42589999999991899799976214
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=2.4e-29 Score=194.53 Aligned_cols=226 Identities=15% Similarity=0.207 Sum_probs=171.5
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCE
Q ss_conf 2348983022--688878878863333467667787517533-2014432137320210037602799604478853205
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtV 1355 (1566)
...|.+.|++ +++++.+ +++++.++.+..|+.... ....+.+|...+.++.|++++..+++++. |+.+
T Consensus 55 ~~~h~~~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~~ 125 (317)
T d1vyhc1 55 LKGHTDSVQDISFDHSGKL-----LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR----DKTI 125 (317)
T ss_dssp ECCCSSCEEEEEECTTSSE-----EEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET----TSEE
T ss_pred EECCCCCEEEEEEECCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECC----CCCE
T ss_conf 9578886777763011110-----111111111011100111111110000000000001699855776526----7523
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCC--------------
Q ss_conf 668730000124444641100214885068821203--6727986268885799952245444456--------------
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHG-------------- 1419 (1566)
Q Consensus 1356 rIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~-------------- 1419 (1566)
++||+.+++....+.+|...+.+++|++++..++++ |+.|++|+..+++....+..+.......
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 205 (317)
T d1vyhc1 126 KMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA 205 (317)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGC
T ss_pred EEEECCCCEEEEEECCCCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCCCEEEEEEECCCCCEEECC
T ss_conf 57511443034687167776300001667999999927982999751254034788247787337998632564111034
Q ss_pred -----------------CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEE
Q ss_conf -----------------89987556445687887-777654435332234660577856430011578773376179998
Q 000399 1420 -----------------GSPSSSISKINTDQVGM-LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFID 1481 (1566)
Q Consensus 1420 -----------------~~~~~~i~~~~~~~~~~-~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWD 1481 (1566)
+..++.+.+|+...... ..+.+|...|.+++++|+ +++|++|+.||.|++||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~~~l~s~~~dg~i~iwd 275 (317)
T d1vyhc1 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSG----------GKFILSCADDKTLRVWD 275 (317)
T ss_dssp CSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS----------SSCEEEEETTTEEEEEC
T ss_pred CCCEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCC----------CCEEEEEECCCEEEEEE
T ss_conf 56303430258861475169978999888999688999688998799998799----------99999997989499999
Q ss_pred CCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEE
Q ss_conf 34783256631687666852468876215998544798544435787035877336776
Q 000399 1482 INQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1566)
Q Consensus 1482 i~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD 1540 (1566)
+++++++.++.+| .+.|++++|+| ++++|++|+.||.|++||
T Consensus 276 ~~~~~~~~~~~~h------~~~V~~~~~s~-----------~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 276 YKNKRCMKTLNAH------EHFVTSLDFHK-----------TAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp CTTSCCCEEEECC------SSCEEEEEECS-----------SSSCEEEEETTSEEEEEC
T ss_pred CCCCCEEEEECCC------CCCEEEEEECC-----------CCCEEEEEECCCEEEEEC
T ss_conf 9999199999289------99889999949-----------999999992899499829
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.95 E-value=7.9e-29 Score=191.27 Aligned_cols=252 Identities=9% Similarity=-0.013 Sum_probs=179.9
Q ss_pred CCCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHH-HHCCCCCEEEEECCCCEEEEEECCCCCCCC
Q ss_conf 12348983022--688878878863333467667787517533-20144-321373202100376027996044788532
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSI-RAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1278 ~~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl-~gH~~~V~siafspdg~~lvSgS~~~g~Dg 1353 (1566)
....|.+.|++ |+|+|.+ |+|||.|++|++||+.++ .+.++ .+|.+.|.+++|+|++.++++ +. |+
T Consensus 7 ~~~GH~~~V~~l~~s~dg~~-----l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~-~~----d~ 76 (299)
T d1nr0a2 7 VRYGHNKAITALSSSADGKT-----LFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV-SW----DD 76 (299)
T ss_dssp EECCCSSCEEEEEECTTSSE-----EEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEE-ET----TT
T ss_pred ECCCCCCCCEEEEECCCCCE-----EEEECCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCEEECC-CC----EE
T ss_conf 84888878289999799999-----9999089929999999996889983788774899884033112102-31----02
Q ss_pred CEEEEEECCCCCC---CCCCCCCCCCCCEEEEECCCCEEEC-CCCEEEEECCCCCEEEEEEC---------CCCCCCCCC
Q ss_conf 0566873000012---4444641100214885068821203-67279862688857999522---------454444568
Q 000399 1354 TVQKWELTRINCV---SGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFAE---------QSMDSLHGG 1420 (1566)
Q Consensus 1354 tVrIWDl~s~~~i---~~l~gH~~~V~sIafsp~~~~LvSg-DgtI~IWD~~tg~~i~~l~~---------h~~~~~~~~ 1420 (1566)
++++|+....... .....+...+.+++|++++..++++ ++.+++|+.... ...... +....+..+
T Consensus 77 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~s~~~~~l~~g 154 (299)
T d1nr0a2 77 HLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL--TEVPISYNSSCVALSNDKQFVAVG 154 (299)
T ss_dssp EEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEE--EEEECSSCEEEEEECTTSCEEEEE
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 688731677620111000111134432100112211111222222211111111--110111123322111111111111
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCC
Q ss_conf 9987556445687887--77765443533223466057785643001157877337617999834783256631687666
Q 000399 1421 SPSSSISKINTDQVGM--LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTEL 1498 (1566)
Q Consensus 1421 ~~~~~i~~~~~~~~~~--~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v 1498 (1566)
..++.+.+|+.+.... .....|...|.+++|+|+ ++++++++.|+.|++||+.++......... .
T Consensus 155 ~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~---~ 221 (299)
T d1nr0a2 155 GQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN----------GAFLVATDQSRKVIPYSVANNFELAHTNSW---T 221 (299)
T ss_dssp ETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTT----------SSEEEEEETTSCEEEEEGGGTTEESCCCCC---C
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---C
T ss_conf 111111111111111111111111111111111111----------111111111111111111111111111111---1
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEE--EEC-CCCEEEEEEEECC
Q ss_conf 852468876215998544798544435787035877336776025851477--402-5760467663015
Q 000399 1499 GFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIAS--WRA-HDGYVTKVRIISK 1565 (1566)
Q Consensus 1499 ~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~--l~~-H~~~Vt~lafsPd 1565 (1566)
.|...|++++++| ++++|++|+.||.|++||++++..... ..+ +...|.++.|.++
T Consensus 222 ~h~~~v~~l~~s~-----------~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 280 (299)
T d1nr0a2 222 FHTAKVACVSWSP-----------DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNE 280 (299)
T ss_dssp CCSSCEEEEEECT-----------TSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEET
T ss_pred CCCCCCCCCCCCC-----------CCCCEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCEEEEEECCC
T ss_conf 1111111112466-----------6451388828997999989999731489834898896899997798
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=7.8e-28 Score=185.09 Aligned_cols=242 Identities=17% Similarity=0.255 Sum_probs=172.3
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEE
Q ss_conf 348983022688878878863333467667787517533-2014432137320210037602799604478853205668
Q 000399 1280 MKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1280 ~~H~~wV~~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIW 1358 (1566)
..|...|+|++++|.+ |+|||.|++|++||+.+. +++++.+|.+.|.+++| ++++|+|||. |++|++|
T Consensus 12 ~~~~~~V~c~~~d~~~-----l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~----D~~i~~~ 80 (293)
T d1p22a2 12 SETSKGVYCLQYDDQK-----IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS----DSTVRVW 80 (293)
T ss_dssp CSSCCCEEEEECCSSE-----EEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET----TSCEEEE
T ss_pred CCCCCCEEEEEECCCE-----EEEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEC--CCCEEECCCC----CCCCCCC
T ss_conf 8999988999876999-----999928993999999999199999267787763423--6300210011----1011000
Q ss_pred EECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEE---EEEECCCCC---------CCCCCCCCC
Q ss_conf 730000124444641100214885068821203--672798626888579---995224544---------445689987
Q 000399 1359 ELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLL---SVFAEQSMD---------SLHGGSPSS 1424 (1566)
Q Consensus 1359 Dl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i---~~l~~h~~~---------~~~~~~~~~ 1424 (1566)
++..+........+.... ..+......++++ ++.+.+||....... ..+..+... .....+.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~ 158 (293)
T d1p22a2 81 DVNTGEMLNTLIHHCEAV--LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR 158 (293)
T ss_dssp ESSSCCEEEEECCCCSCE--EEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred CCCCCCCCCCCCCCCCCC--CCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 002464100111111000--011111100000135663068613445444212100011354311000002201106998
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHH
Q ss_conf 5564456878877-776544353322346605778564300115787733761799983478325663168766685246
Q 000399 1425 SISKINTDQVGML-NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSL 1503 (1566)
Q Consensus 1425 ~i~~~~~~~~~~~-~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~ 1503 (1566)
.+.+|+....... .+.++...+..+.++ +..+++++.|++|++||+++.+.+..+.++...+
T Consensus 159 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v----- 221 (293)
T d1p22a2 159 TIKVWNTSTCEFVRTLNGHKRGIACLQYR------------DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV----- 221 (293)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEE------------TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCE-----
T ss_pred CEEEECCCCCCEEEEECCCCCCCCCCCCC------------CCEEEEECCCCEEEEEECCCCEEEEEECCCCEEE-----
T ss_conf 60410078883889971554453221689------------8758876589989998665561466521431000-----
Q ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCC---------CEEEEEECCCCEEEEEEEECC
Q ss_conf 88762159985447985444357870358773367760258---------514774025760467663015
Q 000399 1504 VSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG---------NVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1504 V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg---------~~i~~l~~H~~~Vt~lafsPd 1565 (1566)
.+ +++++.++++|+.||.|++||++++ .++..+.+|.+.|++++|++.
T Consensus 222 -~~-------------~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~ 278 (293)
T d1p22a2 222 -RC-------------IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF 278 (293)
T ss_dssp -EE-------------EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSS
T ss_pred -EE-------------CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCC
T ss_conf -00-------------1454107999867997999988888644456775455784588998899997199
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=4.8e-27 Score=180.21 Aligned_cols=216 Identities=16% Similarity=0.192 Sum_probs=162.1
Q ss_pred CCCCCCCCCCCCCEEEEE-E----------EHHHHHCCCCCEEEEECCC-----CEEEEEECCCCCCCCCEEEEEECCCC
Q ss_conf 333467667787517533-2----------0144321373202100376-----02799604478853205668730000
Q 000399 1301 LGRVGGLKDESPWKIKAS-I----------LSSIRAHHGALRSVAVGQD-----ECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1566)
Q Consensus 1301 LaTgs~Dg~I~iWdi~~~-~----------l~tl~gH~~~V~siafspd-----g~~lvSgS~~~g~DgtVrIWDl~s~~ 1364 (1566)
+++++.|+.+++|++... . ......+...+..++|.++ +.++++++. |+++++|++....
T Consensus 82 ~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----dg~i~vw~~~~~~ 157 (393)
T d1sq9a_ 82 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV----KGTTYIWKFHPFA 157 (393)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET----TSCEEEEEEESSS
T ss_pred EEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECC----CCCEEEEEEECCC
T ss_conf 999948991999982289820565124563243115789668999844788654217999838----9819998740477
Q ss_pred ------------------CCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf ------------------124444641100214885068821203--672798626888579995224544445689987
Q 000399 1365 ------------------CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1566)
Q Consensus 1365 ------------------~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~ 1424 (1566)
.......+...+++++|++++ .+++| |++|+|||+.+++++..+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~----------- 225 (393)
T d1sq9a_ 158 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQH----------- 225 (393)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC-----------
T ss_pred CCCCEEEEEECCCEECCCCEECCCCCCCCEEEEEECCCC-EEEEEECCCCEEEEEECCCCCCCCCCCCC-----------
T ss_conf 534102331032000145100025789867899978999-89999389829998602332110000111-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCE---EEEEECCCCCEEEEECCCCC-----
Q ss_conf 5564456878877776544353322346605778564300115787733761---79998347832566316876-----
Q 000399 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS---LRFIDINQGQKLHLWRGEPT----- 1496 (1566)
Q Consensus 1425 ~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~Dgt---IriWDi~sg~~l~~l~~h~~----- 1496 (1566)
.+.+|...|.+++|+|+ |++|++|+.|++ |++||+.+++++..+.....
T Consensus 226 -------------~l~~h~~~V~~l~~spd----------g~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~ 282 (393)
T d1sq9a_ 226 -------------SMINNSNSIRSVKFSPQ----------GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS 282 (393)
T ss_dssp ----------------CCCCCEEEEEECSS----------TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-------
T ss_pred -------------CCCCCCCEEEECCCCCC----------CCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCE
T ss_conf -------------11242563877004665----------3201124289884210010353213444311566664310
Q ss_pred --CCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEE----EEEEECCC
Q ss_conf --66852468876215998544798544435787035877336776025851477402576046----76630159
Q 000399 1497 --ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT----KVRIISKR 1566 (1566)
Q Consensus 1497 --~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt----~lafsPdG 1566 (1566)
..+|.++|++++|+| +|++|+||+.|++|++||+.+|+++.++++|.+.|. .++|+|+|
T Consensus 283 ~~~~gH~~~V~~l~fsp-----------d~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~ 347 (393)
T d1sq9a_ 283 LGEFAHSSWVMSLSFND-----------SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHG 347 (393)
T ss_dssp -CCBSBSSCEEEEEECS-----------SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTS
T ss_pred EEEECCCCCEEEECCCC-----------CCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEECCCC
T ss_conf 23202358666001389-----------888069877999899999999979999988687613773489999999
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.95 E-value=2.1e-27 Score=182.43 Aligned_cols=198 Identities=17% Similarity=0.314 Sum_probs=162.3
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-----EEH------------------------------
Q ss_conf 2348983022--688878878863333467667787517533-----201------------------------------
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-----ILS------------------------------ 1321 (1566)
Q Consensus 1279 ~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-----~l~------------------------------ 1321 (1566)
...|..+|++ |+|++.+ +++|+.|+.+++|+.... ...
T Consensus 93 ~~~~~~~v~~v~~~~~~~~-----l~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (340)
T d1tbga_ 93 IPLRSSWVMTCAYAPSGNY-----VACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 167 (340)
T ss_dssp EECSCSCEEEEEECTTSSE-----EEEEETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEE
T ss_pred EECCCCCEEEEEEECCCEE-----EEEECCCCEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7246533775676012114-----43101332010133222212221110013542110111111111111112445432
Q ss_pred -----------HHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEE
Q ss_conf -----------443213732021003760279960447885320566873000012444464110021488506882120
Q 000399 1322 -----------SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS 1390 (1566)
Q Consensus 1322 -----------tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvS 1390 (1566)
....+...+....+.+.+..+++++. |++|++||+.+++++..+.+|...|++++|+|++..+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s 243 (340)
T d1tbga_ 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC----DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFAT 243 (340)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET----TTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEC----CCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEE
T ss_conf 0012322111112331015763001244212687605----736999999999488999578898589999799899999
Q ss_pred C--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEE
Q ss_conf 3--67279862688857999522454444568998755644568788777765443533223466057785643001157
Q 000399 1391 C--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL 1468 (1566)
Q Consensus 1391 g--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~L 1468 (1566)
+ |++|++||.+.......+.... +...|.+++|+|+ ++++
T Consensus 244 ~s~d~~i~~~~~~~~~~~~~~~~~~----------------------------~~~~i~~~~~s~~----------~~~l 285 (340)
T d1tbga_ 244 GSDDATCRLFDLRADQELMTYSHDN----------------------------IICGITSVSFSKS----------GRLL 285 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCTT----------------------------CCSCEEEEEECSS----------SCEE
T ss_pred EECCCEEEEEEECCCCCCCCCCCCC----------------------------CCCCEEEEEECCC----------CCEE
T ss_conf 9699969997521221111111224----------------------------4574589999899----------9999
Q ss_pred EEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEE
Q ss_conf 877337617999834783256631687666852468876215998544798544435787035877336776
Q 000399 1469 VVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1566)
Q Consensus 1469 vsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD 1540 (1566)
++|+.||.|++||+.+++++.++.+| .+.|++++|+| ++.+|++|+.||.|++||
T Consensus 286 ~~g~~dg~i~iwd~~~~~~~~~~~~H------~~~V~~l~~s~-----------d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 286 LAGYDDFNCNVWDALKADRAGVLAGH------DNRVSCLGVTD-----------DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCC------SSCEEEEEECT-----------TSSCEEEEETTSCEEEEC
T ss_pred EEEECCCEEEEEECCCCCEEEEECCC------CCCEEEEEEEC-----------CCCEEEEECCCCEEEEEC
T ss_conf 99979798999999999398998489------99789999908-----------999999990699799859
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=7.2e-28 Score=185.32 Aligned_cols=258 Identities=12% Similarity=0.050 Sum_probs=169.5
Q ss_pred CCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE----EEHHHHHCCCCCEEEEECCC-CEEEEEECCCCCC
Q ss_conf 2348983022--688878878863333467667787517533----20144321373202100376-0279960447885
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS----ILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGF 1351 (1566)
Q Consensus 1279 ~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~----~l~tl~gH~~~V~siafspd-g~~lvSgS~~~g~ 1351 (1566)
...|++.|++ |||++.+ |++||.|++|++||+... .+....+|.+.|.+++|+++ +..+++|+.
T Consensus 7 ~~~h~d~I~~l~fsp~~~~-----L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~---- 77 (342)
T d1yfqa_ 7 EQAPKDYISDIKIIPSKSL-----LLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---- 77 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTE-----EEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET----
T ss_pred CCCCCCCEEEEEEECCCCE-----EEEEECCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCC----
T ss_conf 8899897888999589999-----9999799929999756998636898855899988999995899978998126----
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCC-EEEEECCCCEEEC--CCCEEEEECCCCCEEEEEEC----C------------
Q ss_conf 320566873000012444464110021-4885068821203--67279862688857999522----4------------
Q 000399 1352 KGTVQKWELTRINCVSGYYGHEEVVND-ICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAE----Q------------ 1412 (1566)
Q Consensus 1352 DgtVrIWDl~s~~~i~~l~gH~~~V~s-Iafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~----h------------ 1412 (1566)
|++|++|++...........+...+.. ..+.++...++++ |+++++||++++........ +
T Consensus 78 d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (342)
T d1yfqa_ 78 QGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157 (342)
T ss_dssp TSCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEE
T ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEEEE
T ss_conf 53114542044320000011111111111111111111110122211102023444330230002430012000001000
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCE
Q ss_conf -544445689987556445687887777----654435332234660577856430011578773376179998347832
Q 000399 1413 -SMDSLHGGSPSSSISKINTDQVGMLNS----NTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQK 1487 (1566)
Q Consensus 1413 -~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~ 1487 (1566)
.......+..++.+.+|+......... ......+.+..+.+. ++..+++++.||.+.+|+......
T Consensus 158 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~s~dg~~~v~~~~~~~~ 228 (342)
T d1yfqa_ 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPK---------EQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp ECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSG---------GGCEEEEEETTSEEEEEECCTTCC
T ss_pred CCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEEECC---------CCCEEEEECCCCEEEEEEECCCCC
T ss_conf 16870246517984788760567634111210254221014676369---------998788654899599998059864
Q ss_pred E---------EEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEE
Q ss_conf 5---------6631687666852468876215998544798544435787035877336776025851477402576046
Q 000399 1488 L---------HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1558 (1566)
Q Consensus 1488 l---------~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt 1558 (1566)
. ...........+...|++++|+ |++.+|++|+.||.|++||+.+++.+..+..+ ..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s-----------p~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~ 296 (342)
T d1yfqa_ 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFS-----------PRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDS 296 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEEC-----------TTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSE
T ss_pred EEECCCCCEEEEEEECCCCCCCCCCCEEEEEC-----------CCCCEEEEECCCCEEEEEECCCCCEEEEECCC-CCCE
T ss_conf 01112351256555314777623543159966-----------98447999879998999999989498870589-9987
Q ss_pred EEEEECCC
Q ss_conf 76630159
Q 000399 1559 KVRIISKR 1566 (1566)
Q Consensus 1559 ~lafsPdG 1566 (1566)
.++|+|+|
T Consensus 297 ~~~~s~~~ 304 (342)
T d1yfqa_ 297 VVKIACSD 304 (342)
T ss_dssp EEEEEECS
T ss_pred EEEEEECC
T ss_conf 99999479
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=2.4e-27 Score=182.11 Aligned_cols=247 Identities=14% Similarity=0.086 Sum_probs=178.8
Q ss_pred CCCCCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCE
Q ss_conf 12348983022--6888788788633334676677875175332014432137320210037602799604478853205
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1278 ~~~~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtV 1355 (1566)
.+..|...|.+ |+| |+|||.|++|++||+.+.. .+|.+.|.+++++++. .++++|. |+++
T Consensus 8 ~l~gH~~~I~~l~~s~---------l~sgs~Dg~v~~Wd~~~~~----~~h~~~V~~~~~~~~~-~~~s~s~----D~~v 69 (287)
T d1pgua2 8 TISGHNKGITALTVNP---------LISGSYDGRIMEWSSSSMH----QDHSNLIVSLDNSKAQ-EYSSISW----DDTL 69 (287)
T ss_dssp EECCCSSCEEEEETTT---------TEEEETTSCEEETTTTEEE----CCCCSCEEEEECCSTT-CCEEEET----TTEE
T ss_pred EECCCCCCEEEEEECC---------EEEEECCCEEEEEECCCCC----CCCCCCEEEEEECCCC-EEEEEEE----CCCC
T ss_conf 9988798649999895---------7898489919999899988----8877878999965997-2898861----0122
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC-CCCEEEEECCCCCEEEEEECCCCCCC---------CCCCCCCC
Q ss_conf 668730000124444641100214885068821203-67279862688857999522454444---------56899875
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFAEQSMDSL---------HGGSPSSS 1425 (1566)
Q Consensus 1356 rIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg-DgtI~IWD~~tg~~i~~l~~h~~~~~---------~~~~~~~~ 1425 (1566)
++|++...+. ...+..+++.+++..++++ ++.+.+|+..++..+..+..+..... .....++.
T Consensus 70 ~~w~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 142 (287)
T d1pgua2 70 KVNGITKHEF-------GSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNT 142 (287)
T ss_dssp EETTEEEEEC-------SSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSC
T ss_pred CCCCCCCCCC-------CCCEEEEEECCCCCEEEEEECCCCEEEECCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCE
T ss_conf 2111111111-------221014664167856999603321000011003543101222035652147511100022100
Q ss_pred CCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEE-ECCCCCCCCCHH
Q ss_conf 56445687887--777654435332234660577856430011578773376179998347832566-316876668524
Q 000399 1426 ISKINTDQVGM--LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-WRGEPTELGFPS 1502 (1566)
Q Consensus 1426 i~~~~~~~~~~--~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~-l~~h~~~v~~~~ 1502 (1566)
+.+|+...... .....+...+.+++|+|+ ++++++|+.|+.|++||+.+++.... +.+| ..
T Consensus 143 v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~----------~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h------~~ 206 (287)
T d1pgua2 143 IQVFKLSDLEVSFDLKTPLRAKPSYISISPS----------ETYIAAGDVMGKILLYDLQSREVKTSRWAFR------TS 206 (287)
T ss_dssp EEEEETTEEEEEEECSSCCSSCEEEEEECTT----------SSEEEEEETTSCEEEEETTTTEEEECCSCCC------SS
T ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEECCC----------CCCCCCCCCCCCCCCEEECCCCCCCCCCCCC------CC
T ss_conf 0210001221000121024785369995167----------6521101111110000002332110001111------11
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECC-CCEEEEEECCCCEEEEEEEECCC
Q ss_conf 68876215998544798544435787035877336776025-85147740257604676630159
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS-GNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1503 ~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rt-g~~i~~l~~H~~~Vt~lafsPdG 1566 (1566)
.|.+++|+|.... ......++.++++|+.|+.|++||+++ ++.+..+.+|.+.|++++|+|++
T Consensus 207 ~v~~~~~~p~~~~-~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~ 270 (287)
T d1pgua2 207 KINAISWKPAEKG-ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS 270 (287)
T ss_dssp CEEEEEECCCC-------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT
T ss_pred CCCEEEECCCCCC-CCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCC
T ss_conf 1100000136541-001267887027664999599988899975899927878985899998999
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.94 E-value=2.5e-27 Score=181.92 Aligned_cols=189 Identities=10% Similarity=0.066 Sum_probs=114.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCC-
Q ss_conf 6888788788633334676677875175332014432137320210037602799604478853205668730000124-
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS- 1367 (1566)
Q Consensus 1289 fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~- 1367 (1566)
++++|.. ++.+ .++.+++|+..... .. .....+.+++|+|++.++++++. |+.|++||+.+.+...
T Consensus 107 ~s~~g~~-----~~~~-~~~~i~~~~~~~~~-~~--~~~~~~~~~~~s~~~~~l~~g~~----dg~i~~~d~~~~~~~~~ 173 (299)
T d1nr0a2 107 VSADGDI-----AVAA-CYKHIAIYSHGKLT-EV--PISYNSSCVALSNDKQFVAVGGQ----DSKVHVYKLSGASVSEV 173 (299)
T ss_dssp ECTTSSC-----EEEE-ESSEEEEEETTEEE-EE--ECSSCEEEEEECTTSCEEEEEET----TSEEEEEEEETTEEEEE
T ss_pred CCCCCCC-----CCCC-CCCCCCCCCCCCCC-CC--CCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCC
T ss_conf 1122111-----1122-22222111111111-10--11112332211111111111111----11111111111111111
Q ss_pred CCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 444641100214885068821203--672798626888579995224544445689987556445687887777654435
Q 000399 1368 GYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSG 1445 (1566)
Q Consensus 1368 ~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 1445 (1566)
....|...|.+++|++++..++++ |+.|++||..++....... .+..|...
T Consensus 174 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~---------------------------~~~~h~~~ 226 (299)
T d1nr0a2 174 KTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTN---------------------------SWTFHTAK 226 (299)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCC---------------------------CCCCCSSC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---------------------------CCCCCCCC
T ss_conf 111111111111111111111111111111111111111111111---------------------------11111111
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 33223466057785643001157877337617999834783256631687666852468876215998544798544435
Q 000399 1446 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1566)
Q Consensus 1446 V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~ 1525 (1566)
|.+++|+|+ ++++++|+.|+.|++||++++........... +...++++++ +++.
T Consensus 227 v~~l~~s~~----------~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~---~~~~v~~~~~------------~~~~ 281 (299)
T d1nr0a2 227 VACVSWSPD----------NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH---AMSSVNSVIW------------LNET 281 (299)
T ss_dssp EEEEEECTT----------SSEEEEEETTSCEEEEETTCTTSCCEEETTSS---TTSCEEEEEE------------EETT
T ss_pred CCCCCCCCC----------CCCEEEECCCCEEEEEECCCCCCCEEEEECCC---CCCCEEEEEE------------CCCC
T ss_conf 111124666----------45138882899799998999973148983489---8896899997------------7989
Q ss_pred HHHHCCCCCCEEEEEEC
Q ss_conf 78703587733677602
Q 000399 1526 WIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1526 ~LaSGs~Dg~I~iWD~r 1542 (1566)
+|++|+.||.|++||+.
T Consensus 282 ~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 282 TIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEEEEETTSCEEEEECC
T ss_pred EEEEEECCCEEEEEECC
T ss_conf 99999289979999444
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=5.9e-27 Score=179.64 Aligned_cols=202 Identities=11% Similarity=0.113 Sum_probs=151.0
Q ss_pred CCCCCCEEC--CCCCCCCCCCCCCCCCCC--CCCCCCCEEEE-EEEHHHHHCCCCCEEEEECCCCEE-EEEECCCCCCCC
Q ss_conf 348983022--688878878863333467--66778751753-320144321373202100376027-996044788532
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGG--LKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECT-VFTAGIGPGFKG 1353 (1566)
Q Consensus 1280 ~~H~~wV~~--fSpdg~~~~~e~LaTgs~--Dg~I~iWdi~~-~~l~tl~gH~~~V~siafspdg~~-lvSgS~~~g~Dg 1353 (1566)
..|.+.|++ |+++|.. +++++. |+.+++|+... ..+..+.+|...|.+++|++++.. +++++. |+
T Consensus 112 ~~~~~~v~~v~~s~~~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~----d~ 182 (325)
T d1pgua1 112 QVLAGPISDISWDFEGRR-----LCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD----DG 182 (325)
T ss_dssp ECCSSCEEEEEECTTSSE-----EEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEET----TT
T ss_pred CCCCCCEEEEEECCCCCC-----CCEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEC----CC
T ss_conf 365673779998999882-----201001244047888502331100120012343211112343206888621----11
Q ss_pred CEEEEEECCCCCCC---CCCCCCCCCCCEEEEECC-CCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 05668730000124---444641100214885068-821203--672798626888579995224544445689987556
Q 000399 1354 TVQKWELTRINCVS---GYYGHEEVVNDICVLSSS-GRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1354 tVrIWDl~s~~~i~---~l~gH~~~V~sIafsp~~-~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~ 1427 (1566)
.+++||....+... ...+|...|.+++|+|++ ..++++ |+.|++||.++++++.++.+|..
T Consensus 183 ~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~------------- 249 (325)
T d1pgua1 183 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQE------------- 249 (325)
T ss_dssp EEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTB-------------
T ss_pred CCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCCCCC-------------
T ss_conf 2211112211000000001577775277630345310000112332101343001222111111111-------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf 44568788777765443533223466057785643001157877337617999834783256631687666852468876
Q 000399 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1566)
Q Consensus 1428 ~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sV 1507 (1566)
.+.++.|+.. .+|+++|++|+.|++|++||+++++++..+..+...+ .+..+
T Consensus 250 -----------------~v~~~~~s~~-------~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~----~~~~~ 301 (325)
T d1pgua1 250 -----------------PVQGGIFALS-------WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL----GNQQV 301 (325)
T ss_dssp -----------------CCCSCEEEEE-------ESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG----GGCEE
T ss_pred -----------------CCCCCEEEEE-------CCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCCC----CCEEE
T ss_conf -----------------1111000000-------3689999999589939999999997889999548740----67699
Q ss_pred HCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEE
Q ss_conf 2159985447985444357870358773367760
Q 000399 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1508 a~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~ 1541 (1566)
++.+. ...+|++|+.||.|++||+
T Consensus 302 ~~~~~----------~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 302 GVVAT----------GNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp EEEEE----------ETTEEEEEETTSCEEEEET
T ss_pred EEEEC----------CCCEEEEEECCCEEEEEEC
T ss_conf 99988----------9999999979999999979
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=3.1e-25 Score=168.99 Aligned_cols=191 Identities=13% Similarity=0.126 Sum_probs=142.9
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEE
Q ss_conf 348983022688878878863333467667787517533-2014432137320210037602799604478853205668
Q 000399 1280 MKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1280 ~~H~~wV~~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIW 1358 (1566)
..|...+.++.+++.. +++++.|+.+++||+... .+....++...+.++.|++++..+++++. |++|++|
T Consensus 158 ~~~~~~v~~~~~~~~~-----~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~i~i~ 228 (355)
T d1nexb2 158 RGHMASVRTVSGHGNI-----VVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM----DTTIRIW 228 (355)
T ss_dssp ECCSSCEEEEEEETTE-----EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET----TSCEEEE
T ss_pred EECCCCCCCCCCCCCE-----EEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEECCCC----CCEEEEE
T ss_conf 1002221000025633-----442114420444301311000110001233211111121002101245----6368763
Q ss_pred EECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 730000124444641100214885068821203--672798626888579995224544445689987556445687887
Q 000399 1359 ELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGM 1436 (1566)
Q Consensus 1359 Dl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~ 1436 (1566)
|+.++.++..+.+|...|.+++|+ ++.++++ ||+|++||+.++..... .|
T Consensus 229 d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~--~~------------------------ 280 (355)
T d1nexb2 229 DLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFS--YH------------------------ 280 (355)
T ss_dssp ETTTCCEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEE--EE------------------------
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCC--CCEEEEEECCCCCCCCCCCCCCEECC--CC------------------------
T ss_conf 012211111111111111111232--10033320111111111111110001--24------------------------
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEE-ECCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 777654435332234660577856430011578773376179998347832566-3168766685246887621599854
Q 000399 1437 LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-WRGEPTELGFPSLVSAICACGSEKM 1515 (1566)
Q Consensus 1437 ~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~-l~~h~~~v~~~~~V~sVa~sps~~~ 1515 (1566)
...+.++.+.+. ++++++ ++.|++|++||+++++++.. +.+| ...|.+++++|+
T Consensus 281 ------~~~~~~~~~~~~---------~~~~l~-~g~d~~i~vwd~~tg~~~~~~~~~~------~~~V~~v~~~~~--- 335 (355)
T d1nexb2 281 ------HTNLSAITTFYV---------SDNILV-SGSENQFNIYNLRSGKLVHANILKD------ADQIWSVNFKGK--- 335 (355)
T ss_dssp ------CTTCCCCCEEEE---------CSSEEE-EEETTEEEEEETTTCCBCCSCTTTT------CSEEEEEEEETT---
T ss_pred ------CCCCEEEEEECC---------CCCEEE-EEECCEEEEEECCCCCEEEEEECCC------CCCEEEEEECCC---
T ss_conf ------688229999849---------998999-9809979999999997988884589------998999998399---
Q ss_pred CCCCCCCCHHHHHHCCCCCCEEEEEE
Q ss_conf 47985444357870358773367760
Q 000399 1516 QAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1516 ~~~~~spdG~~LaSGs~Dg~I~iWD~ 1541 (1566)
..+++|+.||.+++|..
T Consensus 336 ---------~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 336 ---------TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp ---------EEEEEEESSSCEEEEEE
T ss_pred ---------EEEEEEECCCCEEEEEE
T ss_conf ---------19999989890999999
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.91 E-value=2.1e-24 Score=163.77 Aligned_cols=117 Identities=11% Similarity=0.029 Sum_probs=60.5
Q ss_pred CCCC-CCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCC
Q ss_conf 2688-878878863333467667787517533201443213732021003760279960447885320566873000012
Q 000399 1288 FPTP-AASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1566)
Q Consensus 1288 ~fSp-dg~~~~~e~LaTgs~Dg~I~iWdi~~~~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i 1366 (1566)
.||| ||++ +++++. +.+.+||+.++.+..+ +|.+.|.+++|+||++.+++++.+ .+..|++||+.+++..
T Consensus 9 ~fSP~dG~~-----~a~~~~-g~v~v~d~~~~~~~~~-~~~~~v~~~~~spDg~~l~~~~~~--~g~~v~v~d~~~~~~~ 79 (360)
T d1k32a3 9 DFSPLDGDL-----IAFVSR-GQAFIQDVSGTYVLKV-PEPLRIRYVRRGGDTKVAFIHGTR--EGDFLGIYDYRTGKAE 79 (360)
T ss_dssp EEEECGGGC-----EEEEET-TEEEEECTTSSBEEEC-SCCSCEEEEEECSSSEEEEEEEET--TEEEEEEEETTTCCEE
T ss_pred CCCCCCCCE-----EEEEEC-CEEEEEECCCCCEEEC-CCCCCEEEEEECCCCCEEEEEECC--CCCEEEEEECCCCCEE
T ss_conf 146889999-----999989-9699998999948991-699988889998999999999928--9989999989999488
Q ss_pred CCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCC
Q ss_conf 4444641100214885068821203--67279862688857999522454
Q 000399 1367 SGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM 1414 (1566)
Q Consensus 1367 ~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~ 1414 (1566)
.+.+|...|.+++|+|++++++++ |+.+++|+..++++...+..+..
T Consensus 80 -~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (360)
T d1k32a3 80 -KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA 128 (360)
T ss_dssp -ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred -EEECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf -7508971277412114543210001111100000122210000001355
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=3.1e-24 Score=162.77 Aligned_cols=190 Identities=16% Similarity=0.284 Sum_probs=145.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCC
Q ss_conf 688878878863333467667787517533-2014432137320210037602799604478853205668730000124
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS 1367 (1566)
Q Consensus 1289 fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~ 1367 (1566)
....... +++++.|+.+++||.... .+..+.+|...+.... +++..+++++. |++|++||+..++++.
T Consensus 143 ~~~~~~~-----~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~~~----dg~i~~~d~~~~~~~~ 211 (342)
T d2ovrb2 143 VQYDGRR-----VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ--FDGIHVVSGSL----DTSIRVWDVETGNCIH 211 (342)
T ss_dssp EEECSSC-----EEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEE--ECSSEEEEEET----TSCEEEEETTTCCEEE
T ss_pred ECCCCCE-----EEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCC--CCCCEEEEEEC----CCEEEEEECCCCEEEE
T ss_conf 0013330-----24335898699952523436678727544421006--89999999958----9939995255653656
Q ss_pred CCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 444641100214885068821203--672798626888579995224544445689987556445687887777654435
Q 000399 1368 GYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSG 1445 (1566)
Q Consensus 1368 ~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 1445 (1566)
.+.+|...|.+++++ +++++++ |++|++||....+....+..+.. +...
T Consensus 212 ~~~~~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~---------------------------~~~~ 262 (342)
T d2ovrb2 212 TLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNK---------------------------HQSA 262 (342)
T ss_dssp EECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTS---------------------------CSSC
T ss_pred EECCCCCCEEEEECC--CCEEEEECCCCEEEEEECCCCCCCCCCCCCCE---------------------------EEEC
T ss_conf 741665320577068--99999974898899986554422111221000---------------------------1101
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 33223466057785643001157877337617999834783256631687666852468876215998544798544435
Q 000399 1446 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1566)
Q Consensus 1446 V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~ 1525 (1566)
+.++.++ ++++++|+.||+|++||++++++++++...... +|...|++++++| ++.
T Consensus 263 ~~~~~~~------------~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~-~~~~~v~~v~~s~-----------~~~ 318 (342)
T d2ovrb2 263 VTCLQFN------------KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESG-GSGGVVWRIRASN-----------TKL 318 (342)
T ss_dssp EEEEEEC------------SSEEEEEETTSEEEEEETTTCCEEEEEEECTTG-GGTCEEEEEEECS-----------SEE
T ss_pred EEECCCC------------CCEEEEECCCCEEEEEECCCCCEEEEEECCCCC-CCCCCEEEEEECC-----------CCC
T ss_conf 0000137------------984499908998999999999798998623478-9889789999879-----------998
Q ss_pred HHHHCCCCCC----EEEEEEC
Q ss_conf 7870358773----3677602
Q 000399 1526 WIAAGLSSGQ----CRLFDVR 1542 (1566)
Q Consensus 1526 ~LaSGs~Dg~----I~iWD~r 1542 (1566)
++++|+.||+ |++||..
T Consensus 319 ~la~g~~dGt~~~~l~~~Df~ 339 (342)
T d2ovrb2 319 VCAVGSRNGTEETKLLVLDFD 339 (342)
T ss_dssp EEEEECSSSSSCCEEEEEECC
T ss_pred EEEEEECCCCCEEEEEEEECC
T ss_conf 999996899970489999389
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.3e-22 Score=152.70 Aligned_cols=221 Identities=14% Similarity=0.132 Sum_probs=137.0
Q ss_pred CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE-EHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEE
Q ss_conf 123489830226888788788633334676677875175332-0144321373202100376027996044788532056
Q 000399 1278 NLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASI-LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1278 ~~~~H~~wV~~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~-l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVr 1356 (1566)
....|+++|+++++++.+ |+||+.|+.+++|++..+. ......+.. ....+......+++++. ++.++
T Consensus 50 ~l~~H~~~V~~v~~~~~~-----l~s~s~D~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~ 118 (293)
T d1p22a2 50 ILTGHTGSVLCLQYDERV-----IITGSSDSTVRVWDVNTGEMLNTLIHHCE--AVLHLRFNNGMMVTCSK----DRSIA 118 (293)
T ss_dssp EECCCSSCEEEEECCSSE-----EEEEETTSCEEEEESSSCCEEEEECCCCS--CEEEEECCTTEEEEEET----TSCEE
T ss_pred EEECCCCCEEEEECCCCE-----EECCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCEEECCC----CCCEE
T ss_conf 992677877634236300-----21001110110000024641001111110--00011111100000135----66306
Q ss_pred EEEECCCCC---CCCCCCCCCCCCCEEEEECCCCEEECCCCEEEEECCCCCEEEEEECCCCC---------CCCCCCCCC
Q ss_conf 687300001---24444641100214885068821203672798626888579995224544---------445689987
Q 000399 1357 KWELTRINC---VSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMD---------SLHGGSPSS 1424 (1566)
Q Consensus 1357 IWDl~s~~~---i~~l~gH~~~V~sIafsp~~~~LvSgDgtI~IWD~~tg~~i~~l~~h~~~---------~~~~~~~~~ 1424 (1566)
+|+..+... ...+..|...|..+.+.+......+.|++|++||.++++++..+.++... .+.++..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg 198 (293)
T d1p22a2 119 VWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDN 198 (293)
T ss_dssp EEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTS
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCC
T ss_conf 86134454442121000113543110000022011069986041007888388997155445322168987588765899
Q ss_pred CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCC---------CEEEEECCC
Q ss_conf 55644568788777-76544353322346605778564300115787733761799983478---------325663168
Q 000399 1425 SISKINTDQVGMLN-SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG---------QKLHLWRGE 1494 (1566)
Q Consensus 1425 ~i~~~~~~~~~~~~-~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg---------~~l~~l~~h 1494 (1566)
.+.+|+........ ...+...+..... ++.++++|+.||.|++||+... .++..+.+|
T Consensus 199 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~------------~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H 266 (293)
T d1p22a2 199 TIRLWDIECGACLRVLEGHEELVRCIRF------------DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 266 (293)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEC------------CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred EEEEEECCCCEEEEEECCCCEEEEECCC------------CCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 8999866556146652143100000145------------4107999867997999988888644456775455784588
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEE
Q ss_conf 7666852468876215998544798544435787035877336776
Q 000399 1495 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1566)
Q Consensus 1495 ~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD 1540 (1566)
.+.|++++++ +.+|+||+.||.|++||
T Consensus 267 ------~~~V~~v~~d-------------~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 267 ------SGRVFRLQFD-------------EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp ------SSCCCCEEEC-------------SSCEEECCSSSEEEEEC
T ss_pred ------CCCEEEEEEC-------------CCEEEEEECCCEEEEEC
T ss_conf ------9988999971-------------99999992299899959
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.89 E-value=3e-23 Score=156.67 Aligned_cols=205 Identities=9% Similarity=-0.012 Sum_probs=141.5
Q ss_pred CCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEH------------------------HHHHC--------
Q ss_conf 48983022--688878878863333467667787517533201------------------------44321--------
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILS------------------------SIRAH-------- 1326 (1566)
Q Consensus 1281 ~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~l~------------------------tl~gH-------- 1326 (1566)
.|+..|++ +++++ . +++++.|+++++|++...... .+...
T Consensus 44 ~h~~~V~~~~~~~~~-~-----~~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (287)
T d1pgua2 44 DHSNLIVSLDNSKAQ-E-----YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSV 117 (287)
T ss_dssp CCCSCEEEEECCSTT-C-----CEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEEECCCC-E-----EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEECCCEEEEEEC
T ss_conf 877878999965997-2-----8988610122211111111122101466416785699960332100001100354310
Q ss_pred CCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCC-CCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCC
Q ss_conf 37320210037602799604478853205668730000124444-641100214885068821203--672798626888
Q 000399 1327 HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1403 (1566)
Q Consensus 1327 ~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~l~-gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg 1403 (1566)
.......++++++..++.++.+ ++.|++|++...+....+. .|...|.+++|+|++.+++++ ||.|++||..++
T Consensus 118 ~~~~~~~~~~~~~~~~~v~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~ 194 (287)
T d1pgua2 118 RLNSPGSAVSLSQNYVAVGLEE---GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR 194 (287)
T ss_dssp ECSSCEEEEEECSSEEEEEETT---TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCCEEEEEECCCCCEEEECCC---CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCC
T ss_conf 1222035652147511100022---1000210001221000121024785369995167652110111111000000233
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECC
Q ss_conf 57999522454444568998755644568788777765443533223466057785643001157877337617999834
Q 000399 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1566)
Q Consensus 1404 ~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~ 1483 (1566)
...... ...|...|.+++|+|..........++.++++|+.|++|++||++
T Consensus 195 ~~~~~~-----------------------------~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~ 245 (287)
T d1pgua2 195 EVKTSR-----------------------------WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 245 (287)
T ss_dssp EEEECC-----------------------------SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred CCCCCC-----------------------------CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEECC
T ss_conf 211000-----------------------------111111110000013654100126788702766499959998889
Q ss_pred C-CCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEE
Q ss_conf 7-832566316876668524688762159985447985444357870358773367760
Q 000399 1484 Q-GQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1484 s-g~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~ 1541 (1566)
+ ++.+..+.+| ...|++++|++++ .+++++.||.|++||+
T Consensus 246 ~~~~~~~~~~~h------~~~V~~v~~~~~~------------~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 246 RPMKIIKALNAH------KDGVNNLLWETPS------------TLVSSGADACIKRWNV 286 (287)
T ss_dssp CTTCCEEETTSS------TTCEEEEEEEETT------------EEEEEETTSCEEEEEE
T ss_pred CCCEEEEEECCC------CCCEEEEEECCCC------------EEEEEECCCEEEEEEE
T ss_conf 997589992787------8985899998999------------8999979992999997
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.88 E-value=4e-23 Score=155.86 Aligned_cols=238 Identities=11% Similarity=-0.063 Sum_probs=136.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE------EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEC
Q ss_conf 2688878878863333467667787517533------2014432137320210037602799604478853205668730
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKAS------ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT 1361 (1566)
Q Consensus 1288 ~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~------~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~ 1361 (1566)
+|||||++ +++++.|+++++||+.+. .+....+|.+.+.+++|+|||+++++++. .|+++++||..
T Consensus 68 afSPDGk~-----l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~---~~~~v~i~d~~ 139 (426)
T d1hzua2 68 RMSASGRY-----LLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY---WPPQFAIMDGE 139 (426)
T ss_dssp EECTTSCE-----EEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE---ESSEEEEEETT
T ss_pred EECCCCCE-----EEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEC---CCCEEEEECCC
T ss_conf 99899999-----99995899889997568860489998678887645885002688987999635---89769998577
Q ss_pred CCCCCCCCCCCC-------------------------------------------------------CCCCCEEEEECCC
Q ss_conf 000124444641-------------------------------------------------------1002148850688
Q 000399 1362 RINCVSGYYGHE-------------------------------------------------------EVVNDICVLSSSG 1386 (1566)
Q Consensus 1362 s~~~i~~l~gH~-------------------------------------------------------~~V~sIafsp~~~ 1386 (1566)
++.+...+.+|. ..+.++.|+++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 219 (426)
T d1hzua2 140 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHR 219 (426)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSC
T ss_pred CCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCC
T ss_conf 64125786226777364364278850389987878788885278976999992466520457756677537613778886
Q ss_pred CEE-EC--CCCEEEEECCCCCEEEEEECCCCC----------------CCCCCCCCCCCCCCCCCCCC--------CCCC
Q ss_conf 212-03--672798626888579995224544----------------44568998755644568788--------7777
Q 000399 1387 RIA-SC--DGTLHVWNSQTGKLLSVFAEQSMD----------------SLHGGSPSSSISKINTDQVG--------MLNS 1439 (1566)
Q Consensus 1387 ~Lv-Sg--DgtI~IWD~~tg~~i~~l~~h~~~----------------~~~~~~~~~~i~~~~~~~~~--------~~~~ 1439 (1566)
++. +. +..+.+||..+++.+......... .......++.+..+...... ...+
T Consensus 220 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l 299 (426)
T d1hzua2 220 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL 299 (426)
T ss_dssp EEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEE
T ss_conf 78864201100000002556278875058744434201100698774577415789659885225665203302586898
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCEEE-------EEECCCEEEEEECCCCCEEEEECCCCCC---CCCHHHHHHHHC
Q ss_conf 654435332234660577856430011578-------7733761799983478325663168766---685246887621
Q 000399 1440 NTLSSGILSTAFDGNLYTCLHHIECVERLV-------VGIGNGSLRFIDINQGQKLHLWRGEPTE---LGFPSLVSAICA 1509 (1566)
Q Consensus 1440 ~~~~~~V~siafsp~~~t~l~~s~dg~~Lv-------sgs~DgtIriWDi~sg~~l~~l~~h~~~---v~~~~~V~sVa~ 1509 (1566)
.+|...+.+++|+|+ +++++ +++.|++|++||+.++++..++..+... ..+...|..++
T Consensus 300 ~g~~~~v~~v~~sPd----------g~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~- 368 (426)
T d1hzua2 300 QGQGGGSLFIKTHPK----------SSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPE- 368 (426)
T ss_dssp ECSSSCCCCEECCTT----------CSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEE-
T ss_pred ECCCCCEEEEECCCC----------CCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCHHCCCCCCCCCEEEEE-
T ss_conf 668876367874899----------861888506798802288799998987876708950211025677885189879-
Q ss_pred CCCCCCCCCCCCCCHHHH-HH----CCCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 599854479854443578-70----3587733677602585147740257
Q 000399 1510 CGSEKMQAGGAVASPSWI-AA----GLSSGQCRLFDVRSGNVIASWRAHD 1554 (1566)
Q Consensus 1510 sps~~~~~~~~spdG~~L-aS----Gs~Dg~I~iWD~rtg~~i~~l~~H~ 1554 (1566)
|||||+++ ++ ++.||.|++||.+|++....++++.
T Consensus 369 ----------fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~ 408 (426)
T d1hzua2 369 ----------YNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 408 (426)
T ss_dssp ----------ECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred ----------ECCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCC
T ss_conf ----------9999999999972488889829999999873899987898
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.88 E-value=1.3e-23 Score=158.91 Aligned_cols=120 Identities=11% Similarity=0.040 Sum_probs=88.9
Q ss_pred CCCCCEEC--CCCCCCCCCCCCCCCCCCCC--CCCCCEEEEEEEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEE
Q ss_conf 48983022--68887887886333346766--778751753320144321373202100376027996044788532056
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLK--DESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1281 ~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg--~I~iWdi~~~~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVr 1356 (1566)
.|.+.|.+ |||||++ |++++.|. .+++||..++.+..+.+|.+.|.+++|+|+++++++++. |+.++
T Consensus 40 ~~~~~v~~~~~spDg~~-----l~~~~~~~g~~v~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~----~~~~~ 110 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKV-----AFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND----RFEIM 110 (360)
T ss_dssp SCCSCEEEEEECSSSEE-----EEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEET----TSEEE
T ss_pred CCCCCEEEEEECCCCCE-----EEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCEECC----CCCCC
T ss_conf 69998888999899999-----9999928998999998999948875089712774121145432100011----11100
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEE----------C--CCCEEEEECCCCCEEEEE
Q ss_conf 6873000012444464110021488506882120----------3--672798626888579995
Q 000399 1357 KWELTRINCVSGYYGHEEVVNDICVLSSSGRIAS----------C--DGTLHVWNSQTGKLLSVF 1409 (1566)
Q Consensus 1357 IWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvS----------g--DgtI~IWD~~tg~~i~~l 1409 (1566)
+|++.++++...+..|...+.+++|+|+++.++. + ++.+++||..+++.....
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~ 175 (360)
T d1k32a3 111 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 175 (360)
T ss_dssp EEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CCCCCCCCEEEEEECCCCCCCCHHHCCCEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEEC
T ss_conf 00012221000000135520230121322566521233121100025654266304557135303
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.87 E-value=5.7e-23 Score=154.93 Aligned_cols=106 Identities=8% Similarity=-0.070 Sum_probs=49.7
Q ss_pred CCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCC-----CCCCCCCC
Q ss_conf 333467667787517533-201443213732021003760279960447885320566873000012-----44446411
Q 000399 1301 LGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV-----SGYYGHEE 1374 (1566)
Q Consensus 1301 LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i-----~~l~gH~~ 1374 (1566)
+++.+.|++|.+||..+. ++..+..+ ..+..++|+|||+++++++. |++|++||+.+++.. ....+|.+
T Consensus 35 ~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~----dg~v~~~d~~t~~~~~~~~i~~~~~~~~ 109 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGR----DGKVNMIDLWMKEPTTVAEIKIGSEARS 109 (432)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEECC-CCEEEEEECCCCCEEEEECC----CCCEEEEEEECCCCEEEEEEECCCCCCC
T ss_conf 999769997999989998399997379-97137998899999999828----9997899810898128899844889877
Q ss_pred CCCCEEEEECCCCE-EEC--CCCEEEEECCCCCEEEEEEC
Q ss_conf 00214885068821-203--67279862688857999522
Q 000399 1375 VVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAE 1411 (1566)
Q Consensus 1375 ~V~sIafsp~~~~L-vSg--DgtI~IWD~~tg~~i~~l~~ 1411 (1566)
.+.+..|+|+++++ +++ |++|++||..+++++..+..
T Consensus 110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~ 149 (432)
T d1qksa2 110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 149 (432)
T ss_dssp EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred EEEECCCCCCCCEEEEECCCCCEEEEEECCCCCCEEEECC
T ss_conf 6984321888888999817898279990765542254024
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.87 E-value=5.9e-25 Score=167.23 Aligned_cols=144 Identities=17% Similarity=0.017 Sum_probs=103.4
Q ss_pred CCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCC--------CHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 2230255503135699997310267710001011133542144662211--------01202177787889998745699
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESK--------NFLRLIGVPSFDESSVPGCLRHP 235 (1566)
Q Consensus 164 y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~--------~~l~~~g~~~~rEi~iL~~l~Hp 235 (1566)
+.+.++||+|+||.||+|++ .++..||+|+++.+........ .+.......+.+|...+..+.|+
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~-------~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~ 74 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYS-------EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGL 74 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEE-------TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CHHCCEEEECCCEEEEEEEC-------CCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 02277802485659999997-------99999999998604434666556563000888999999778999999981699
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 83120011013573123024886422213014911112014789999999999998762255677756787210110012
Q 000399 236 NVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 236 NIV~l~~~~~~~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~ 315 (1566)
+++..++.. ..+++||++++.... .++...+..++.|++.++.|||++||+||||||+|||+++++
T Consensus 75 ~v~~~~~~~----~~~lvme~~~~~~~~--------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~~-- 140 (191)
T d1zara2 75 AVPKVYAWE----GNAVLMELIDAKELY--------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEG-- 140 (191)
T ss_dssp SSCCEEEEE----TTEEEEECCCCEEGG--------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETTE--
T ss_pred CCCEEEEEC----CCEEEEEEECCCCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEECCC--
T ss_conf 914499862----888999950456542--------001578999999999999998268889836890361142898--
Q ss_pred HHHHCCCCCCCCCC
Q ss_conf 34240768777655
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~iKI~DFGla~~~~ 329 (1566)
++|+|||+|+...
T Consensus 141 -~~liDFG~a~~~~ 153 (191)
T d1zara2 141 -IWIIDFPQSVEVG 153 (191)
T ss_dssp -EEECCCTTCEETT
T ss_pred -EEEEECCCCCCCC
T ss_conf -9998778843089
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.86 E-value=1e-22 Score=153.38 Aligned_cols=251 Identities=10% Similarity=-0.022 Sum_probs=166.5
Q ss_pred CCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCC-----CCCCCCC
Q ss_conf 333467667787517533-2014432137320210037602799604478853205668730000124-----4446411
Q 000399 1301 LGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS-----GYYGHEE 1374 (1566)
Q Consensus 1301 LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~-----~l~gH~~ 1374 (1566)
+++.+.|++|++||+.++ .+.++..| ..+.+++|+|||+++++++. |++|++||+.++++.. ...+|..
T Consensus 35 ~V~~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk~l~~~~~----d~~v~vwd~~t~~~~~~~~i~~~~~~~~ 109 (426)
T d1hzua2 35 SVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGR----DARIDMIDLWAKEPTKVAEIKIGIEARS 109 (426)
T ss_dssp EEEETTTTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSCEEEEEET----TSEEEEEETTSSSCEEEEEEECCSEEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEECC-CCEEEEEECCCCCEEEEEEC----CCCEEEEECCCCCEEEEEEEECCCCCCC
T ss_conf 999759997999999999599999689-98038999899999999958----9988999756886048999867888764
Q ss_pred CCCCEEEEECCCCE-EEC--CCCEEEEECCCCCEEEEEECCCCCCCC------------CCCCCCCCCCCCCCCCCC---
Q ss_conf 00214885068821-203--672798626888579995224544445------------689987556445687887---
Q 000399 1375 VVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH------------GGSPSSSISKINTDQVGM--- 1436 (1566)
Q Consensus 1375 ~V~sIafsp~~~~L-vSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~------------~~~~~~~i~~~~~~~~~~--- 1436 (1566)
.+.+++|+|+++++ +++ |+++++||..++.++.....+...... ....++....+.....+.
T Consensus 110 ~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~ 189 (426)
T d1hzua2 110 VESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLL 189 (426)
T ss_dssp EEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEEEEEECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEE
T ss_conf 58850026889879996358976999857764125786226777364364278850389987878788885278976999
Q ss_pred ----------CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE-ECCCEEEEEECCCCCEEEEECCCCCCC-------
Q ss_conf ----------77765443533223466057785643001157877-337617999834783256631687666-------
Q 000399 1437 ----------LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG-IGNGSLRFIDINQGQKLHLWRGEPTEL------- 1498 (1566)
Q Consensus 1437 ----------~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsg-s~DgtIriWDi~sg~~l~~l~~h~~~v------- 1498 (1566)
.....+...+..++++|+ +++++++ ..+..+.+||..+++.+..........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (426)
T d1hzua2 190 VNYKDIDNLTVTSIGAAPFLADGGWDSS----------HRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF 259 (426)
T ss_dssp EECSSSSSCEEEEEECCSSEEEEEECTT----------SCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEE
T ss_pred EEECCCCCEEEEEECCCCCCEEEEECCC----------CCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEEE
T ss_conf 9924665204577566775376137788----------867886420110000000255627887505874443420110
Q ss_pred --CCHHHHHHHHCCC----------------------------CCCCCCCCCCCCHHHHH-------HCCCCCCEEEEEE
Q ss_conf --8524688762159----------------------------98544798544435787-------0358773367760
Q 000399 1499 --GFPSLVSAICACG----------------------------SEKMQAGGAVASPSWIA-------AGLSSGQCRLFDV 1541 (1566)
Q Consensus 1499 --~~~~~V~sVa~sp----------------------------s~~~~~~~~spdG~~La-------SGs~Dg~I~iWD~ 1541 (1566)
.+...+.....++ ......++++|+|++++ +++.|++|++||+
T Consensus 260 ~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~ 339 (426)
T d1hzua2 260 VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDL 339 (426)
T ss_dssp EETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEET
T ss_pred ECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEC
T ss_conf 06987745774157896598852256652033025868986688763678748998618885067988022887999989
Q ss_pred CCCCEEEEEE---------CCCCEEEEEEEECCC
Q ss_conf 2585147740---------257604676630159
Q 000399 1542 RSGNVIASWR---------AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1542 rtg~~i~~l~---------~H~~~Vt~lafsPdG 1566 (1566)
.+++.+..+. .|...|..++|||||
T Consensus 340 ~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDG 373 (426)
T d1hzua2 340 KNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRG 373 (426)
T ss_dssp TCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSS
T ss_pred CCCCCCEEEECCCHHCCCCCCCCCEEEEEECCCC
T ss_conf 8787670895021102567788518987999999
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.85 E-value=6.6e-22 Score=148.32 Aligned_cols=259 Identities=8% Similarity=-0.010 Sum_probs=157.4
Q ss_pred CCCCCCCCCCHHHHHHHHHCCCCCCCCEEC--CCCC-CCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHHH-CCCCCEEE
Q ss_conf 444311122458888973012348983022--6888-78878863333467667787517533-2014432-13732021
Q 000399 1259 QRRVYDYHKSSVERQEATSNLMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRA-HHGALRSV 1333 (1566)
Q Consensus 1259 ~~~v~~l~~~~~~~~~~~~~~~~H~~wV~~--fSpd-g~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~g-H~~~V~si 1333 (1566)
..++++++....... ......|.+.|.+ |+|+ +.+ |++|+.|+.+++|++... ....... +.......
T Consensus 34 ~v~iwd~~~~~~~~~--~~~~~~h~~~V~~v~f~~~~~~~-----l~sg~~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~ 106 (342)
T d1yfqa_ 34 SLTVYKFDIQAKNVD--LLQSLRYKHPLLCCNFIDNTDLQ-----IYVGTVQGEILKVDLIGSPSFQALTNNEANLGICR 106 (342)
T ss_dssp EEEEEEEETTTTEEE--EEEEEECSSCEEEEEEEESSSEE-----EEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEE
T ss_pred EEEEEECCCCCCCEE--EEEECCCCCCEEEEEEECCCCCE-----EEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 299997569986368--98855899988999995899978-----99812653114542044320000011111111111
Q ss_pred EECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCC----CCC--CCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCE
Q ss_conf 003760279960447885320566873000012444----464--1100214885068821203--67279862688857
Q 000399 1334 AVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY----YGH--EEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKL 1405 (1566)
Q Consensus 1334 afspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~l----~gH--~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~ 1405 (1566)
.+.++...+++++. |+++++||+.+....... ..+ ........+.+....++++ |+.|++||++.+..
T Consensus 107 ~~~~~~~~~~~~~~----~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 182 (342)
T d1yfqa_ 107 ICKYGDDKLIAASW----DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED 182 (342)
T ss_dssp EEEETTTEEEEEET----TSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTT
T ss_pred CCCCCCCCCCCCCC----CCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCEEEECCCCCEEEEECCCCCC
T ss_conf 11111111111012----22111020234443302300024300120000010001687024651798478876056763
Q ss_pred EEEEEC---------------CCCCCCCCCCCCCCCCCCCCCCCCC----------------CCCCCCCCCCCCCCCCCH
Q ss_conf 999522---------------4544445689987556445687887----------------777654435332234660
Q 000399 1406 LSVFAE---------------QSMDSLHGGSPSSSISKINTDQVGM----------------LNSNTLSSGILSTAFDGN 1454 (1566)
Q Consensus 1406 i~~l~~---------------h~~~~~~~~~~~~~i~~~~~~~~~~----------------~~~~~~~~~V~siafsp~ 1454 (1566)
...... .....+..+..++.+.++..+.... .....+...+++++|+|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~ 262 (342)
T d1yfqa_ 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR 262 (342)
T ss_dssp CCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT
T ss_pred CCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEECCC
T ss_conf 41112102542210146763699987886548995999980598640111235125655531477762354315996698
Q ss_pred HHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 57785643001157877337617999834783256631687666852468876215998544798544435787035877
Q 000399 1455 LYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSG 1534 (1566)
Q Consensus 1455 ~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg 1534 (1566)
+++|++|+.||+|++||+.+++++.++..+.. +..+++ +++|+++++|++|+
T Consensus 263 ----------~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~-------~~~~~~-----------s~~~~~l~~a~sdd 314 (342)
T d1yfqa_ 263 ----------HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-------DSVVKI-----------ACSDNILCLATSDD 314 (342)
T ss_dssp ----------TCCEEEEETTSCEEEEETTTTEEEEECCCCSS-------SEEEEE-----------EECSSEEEEEEECT
T ss_pred ----------CCEEEEECCCCEEEEEECCCCCEEEEECCCCC-------CEEEEE-----------EECCCEEEEEECCC
T ss_conf ----------44799987999899999998949887058999-------879999-----------94799999999199
Q ss_pred CEEEEEECCCCEEEEEECCCCEEEEE
Q ss_conf 33677602585147740257604676
Q 000399 1535 QCRLFDVRSGNVIASWRAHDGYVTKV 1560 (1566)
Q Consensus 1535 ~I~iWD~rtg~~i~~l~~H~~~Vt~l 1560 (1566)
.+++|..... .+..|...|..+
T Consensus 315 ~~~~~~~~~~----~~~~~~~~i~~~ 336 (342)
T d1yfqa_ 315 TFKTNAAIDQ----TIELNASSIYII 336 (342)
T ss_dssp HHHHCSSSCT----TSCCCCCEEEEE
T ss_pred CEEEEEEECC----CCCCCCCEEEEE
T ss_conf 2788301278----766899869998
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.79 E-value=1.5e-18 Score=127.40 Aligned_cols=113 Identities=7% Similarity=-0.118 Sum_probs=81.0
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE------EEHHHHHCCCCCEEEEECCCCEEE-EEECCCCCCCCCEEEEE
Q ss_conf 22688878878863333467667787517533------201443213732021003760279-96044788532056687
Q 000399 1287 WFPTPAASWDGPDFLGRVGGLKDESPWKIKAS------ILSSIRAHHGALRSVAVGQDECTV-FTAGIGPGFKGTVQKWE 1359 (1566)
Q Consensus 1287 ~~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~------~l~tl~gH~~~V~siafspdg~~l-vSgS~~~g~DgtVrIWD 1359 (1566)
.+|||||++ +++++.|+++++||+.+. .+....+|.+.+.+.+|+|||+++ ++++. |++|++||
T Consensus 67 v~fSpDG~~-----l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~----~~~v~i~d 137 (432)
T d1qksa2 67 SRLSASGRY-----LFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW----PPQYVIMD 137 (432)
T ss_dssp EEECTTSCE-----EEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE----TTEEEEEE
T ss_pred EEECCCCCE-----EEEECCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCCCCCCEEEEECCC----CCEEEEEE
T ss_conf 998899999-----999828999789981089812889984488987769843218888889998178----98279990
Q ss_pred ECCCCCCCCCCCCCCCC-----------CCEEEEECCCCE-EEC--CCCEEEEECCCCCEEEE
Q ss_conf 30000124444641100-----------214885068821-203--67279862688857999
Q 000399 1360 LTRINCVSGYYGHEEVV-----------NDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSV 1408 (1566)
Q Consensus 1360 l~s~~~i~~l~gH~~~V-----------~sIafsp~~~~L-vSg--DgtI~IWD~~tg~~i~~ 1408 (1566)
..+++++..+.+|...+ .++.+++++..+ ++. ++.|.+||..+++...+
T Consensus 138 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~ 200 (432)
T d1qksa2 138 GETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT 200 (432)
T ss_dssp TTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE
T ss_pred CCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCEE
T ss_conf 765542254024776435220168885058998789998999981688299998437875227
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.79 E-value=6.1e-19 Score=129.92 Aligned_cols=244 Identities=11% Similarity=0.036 Sum_probs=154.6
Q ss_pred ECCCCCCCCCCCCCC-CCCCCCCCCCCCEEEEE-EEHHHHH-----CCCCCEEEEECCCCEEEEEECCCC--------CC
Q ss_conf 226888788788633-33467667787517533-2014432-----137320210037602799604478--------85
Q 000399 1287 WFPTPAASWDGPDFL-GRVGGLKDESPWKIKAS-ILSSIRA-----HHGALRSVAVGQDECTVFTAGIGP--------GF 1351 (1566)
Q Consensus 1287 ~~fSpdg~~~~~e~L-aTgs~Dg~I~iWdi~~~-~l~tl~g-----H~~~V~siafspdg~~lvSgS~~~--------g~ 1351 (1566)
.+|||||++ + ++++.|+.|.+||+.++ .+..+.. +...+..++|+|++.++++++.+. ..
T Consensus 39 i~~spDg~~-----l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T d1pbyb_ 39 PMVAPGGRI-----AYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp EEECTTSSE-----EEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred EEECCCCCE-----EEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCC
T ss_conf 999999899-----999978999499999999929888724777312540254898687757999504776203420345
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32056687300001244446411002148850688212036727986268885799952245444456899875564456
Q 000399 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1431 (1566)
Q Consensus 1352 DgtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSgDgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~ 1431 (1566)
+..+.+||..+++....+. +...+..++|++++++++++++.+.+||..+++....+..+.........+++.......
T Consensus 114 ~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (337)
T d1pbyb_ 114 PTRVALYDAETLSRRKAFE-APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQH 192 (337)
T ss_dssp CCEEEEEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCC
T ss_pred CCCEEECCCCCCEEEEECC-CCCCCEEEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCCCCCCEECCCCCEEECCC
T ss_conf 5521203566775988414-568721899868888899971775056630372788861477543311357763140146
Q ss_pred CCCC--------------CCC----------CCCCCCCCCCCCCCCH--HHHHHHHHHCCCEEEEEECCCEEEEEECCCC
Q ss_conf 8788--------------777----------7654435332234660--5778564300115787733761799983478
Q 000399 1432 DQVG--------------MLN----------SNTLSSGILSTAFDGN--LYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485 (1566)
Q Consensus 1432 ~~~~--------------~~~----------~~~~~~~V~siafsp~--~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg 1485 (1566)
.... ... .......+....+.+. ...++.+++++.+++.+ |+.|++||+.++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~ 270 (337)
T d1pbyb_ 193 ESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN 270 (337)
T ss_dssp TTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT
T ss_pred CCCCEEEEEEEEEEECCCEEEECCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEC--CCCEEEEECCCC
T ss_conf 653124663244410366045403676179998688858889832887505888742661399973--552899989889
Q ss_pred CEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCE
Q ss_conf 32566316876668524688762159985447985444357870358773367760258514774025760
Q 000399 1486 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1566)
Q Consensus 1486 ~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~ 1556 (1566)
+.+..+... ..+.+++++ |+|+++++|+.||.|++||+.+++.+..++.....
T Consensus 271 ~~~~~~~~~-------~~~~~~~~s-----------~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~~g~~ 323 (337)
T d1pbyb_ 271 ASIKRVPLP-------HSYYSVNVS-----------TDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNA 323 (337)
T ss_dssp EEEEEEECS-------SCCCEEEEC-----------TTSCEEEEESBSSEEEEEETTTCCEEEEEECGGGC
T ss_pred CEEEEECCC-------CCEEEEEEC-----------CCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCC
T ss_conf 699997489-------988999997-----------89999999949992999999987698999889998
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.77 E-value=1.2e-20 Score=140.45 Aligned_cols=92 Identities=18% Similarity=0.260 Sum_probs=76.6
Q ss_pred CCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH--CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 776200010000035653000001100111314455666420366666211466653--299864101389604689998
Q 000399 713 EGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE--NGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 713 ~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~--~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
...+-+||++....| +.++||||+||++|||++|++||.+.+...... ......+++.+|+++++||.+
T Consensus 167 t~~Y~APE~~~~~~~---------~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 237 (263)
T d2j4za1 167 TLDYLPPEMIEGRMH---------DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISR 237 (263)
T ss_dssp EGGGCCHHHHTTCCC---------CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCTTSCHHHHHHHHH
T ss_pred CCCCCCHHHHCCCCC---------CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 876349999758998---------93144046759999983299998889999999999718999986689999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 73023356887432224787653
Q 000399 791 CITKDWTRRPSAKSLLESPYFPS 813 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~hp~F~~ 813 (1566)
||++||++|||+.|+|+||||..
T Consensus 238 ~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 238 LLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp HTCSSGGGSCCHHHHHTCHHHHH
T ss_pred HCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 76479768909999971907078
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=99.77 E-value=3.4e-20 Score=137.72 Aligned_cols=94 Identities=15% Similarity=0.199 Sum_probs=76.6
Q ss_pred CCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH---CCC--C-CCCCCCCCCHHHH
Q ss_conf 776200010000035653000001100111314455666420366666211466653---299--8-6410138960468
Q 000399 713 EGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGD--L-PGVMEELPSHTRI 786 (1566)
Q Consensus 713 ~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~---~~~--~-~~~~~~~s~~~~d 786 (1566)
...+-+||++....| +.++||||+||++|||++|++||.+........ ... . ...++.+|+++++
T Consensus 191 t~~y~aPE~~~~~~~---------~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~ 261 (352)
T d1koba_ 191 TAEFAAPEIVDREPV---------GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKD 261 (352)
T ss_dssp SGGGCCHHHHTTCCB---------CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHH
T ss_pred CCCCCCHHHHCCCCC---------CCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
T ss_conf 645348999747998---------97633389899999999688998997999999999847889893002479999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99987302335688743222478765333
Q 000399 787 LVEACITKDWTRRPSAKSLLESPYFPSTV 815 (1566)
Q Consensus 787 lI~~lL~~DP~~R~sa~elL~hp~F~~~~ 815 (1566)
||++||++||++|+|+.|+|+||||+...
T Consensus 262 li~~~L~~dp~~R~s~~eil~Hp~~~~~~ 290 (352)
T d1koba_ 262 FIKNLLQKEPRKRLTVHDALEHPWLKGDH 290 (352)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred HHHHHCCCCHHHCCCHHHHHCCHHHCCCC
T ss_conf 99997569966891899996097348882
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.77 E-value=1.4e-18 Score=127.70 Aligned_cols=245 Identities=8% Similarity=-0.026 Sum_probs=138.3
Q ss_pred CCCCCCCCCCCCCCCEEEEE-EEHHHHH--CCCCCEEEEECCCCEEEE-EECCCCCCCCCEEEEEECCCCCCCCCCCC--
Q ss_conf 63333467667787517533-2014432--137320210037602799-60447885320566873000012444464--
Q 000399 1299 DFLGRVGGLKDESPWKIKAS-ILSSIRA--HHGALRSVAVGQDECTVF-TAGIGPGFKGTVQKWELTRINCVSGYYGH-- 1372 (1566)
Q Consensus 1299 e~LaTgs~Dg~I~iWdi~~~-~l~tl~g--H~~~V~siafspdg~~lv-SgS~~~g~DgtVrIWDl~s~~~i~~l~gH-- 1372 (1566)
+++++++.|++|.+||+.+. .+.++.. +...+.+++|+||+++++ +++. |+.|.+||+.+++.+..+..+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~----~~~v~v~D~~t~~~~~~~~~~~~ 77 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK----SESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT----TTEEEEEETTTCCEEEEEECCBT
T ss_pred EEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECC----CCEEEEEECCCCCEEEEEECCCC
T ss_conf 69999767998999999999499999877889982379999998999999789----99499999999929888724777
Q ss_pred ---CCCCCCEEEEECCCCEEEC--------------CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC------
Q ss_conf ---1100214885068821203--------------67279862688857999522454444568998755644------
Q 000399 1373 ---EEVVNDICVLSSSGRIASC--------------DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI------ 1429 (1566)
Q Consensus 1373 ---~~~V~sIafsp~~~~LvSg--------------DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~------ 1429 (1566)
...+..++|+++++.++.+ +..+.+||..+++....+..+.........+++.....
T Consensus 78 ~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 157 (337)
T d1pbyb_ 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLH 157 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCCCC
T ss_conf 31254025489868775799950477620342034555212035667759884145687218998688888999717750
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCCCHHHHHH--------------HHHHCCCEEEEEECCCEEEEEECCCCCEEEEECC
Q ss_conf --568788777765443533223466057785--------------6430011578773376179998347832566316
Q 000399 1430 --NTDQVGMLNSNTLSSGILSTAFDGNLYTCL--------------HHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1493 (1566)
Q Consensus 1430 --~~~~~~~~~~~~~~~~V~siafsp~~~t~l--------------~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~ 1493 (1566)
+....................+.++..... ....+......++.++.+.+||..++........
T Consensus 158 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
T d1pbyb_ 158 VMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR 237 (337)
T ss_dssp EEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEE
T ss_pred EEEEECCCEEEEEECCCCCCCCEECCCCCEEECCCCCCCEEEEEEEEEEECCCEEEECCCCCCEEEEECCCCCEEEEEEC
T ss_conf 56630372788861477543311357763140146653124663244410366045403676179998688858889832
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCC
Q ss_conf 8766685246887621599854479854443578703587733677602585147740257604676630159
Q 000399 1494 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1494 h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPdG 1566 (1566)
+. ...+...+ +++++.+++++ |+.+++||+.+++.+..+. +...+.+++|+|||
T Consensus 238 ~~-----~~~~~~~~-----------~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG 291 (337)
T d1pbyb_ 238 IM-----DVFYFSTA-----------VNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDG 291 (337)
T ss_dssp EC-----SSCEEEEE-----------ECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTS
T ss_pred CC-----CCCEEEEE-----------ECCCCEEEEEC--CCCEEEEECCCCCEEEEEC-CCCCEEEEEECCCC
T ss_conf 88-----75058887-----------42661399973--5528999898896999974-89988999997899
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.76 E-value=1.5e-18 Score=127.46 Aligned_cols=228 Identities=11% Similarity=0.085 Sum_probs=156.2
Q ss_pred ECCCCCCCCCCCCCC-CCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCC
Q ss_conf 226888788788633-33467667787517533-2014432137320210037602799604478853205668730000
Q 000399 1287 WFPTPAASWDGPDFL-GRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1566)
Q Consensus 1287 ~~fSpdg~~~~~e~L-aTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~ 1364 (1566)
.+|||+|++ | ++++.++.|++||+.+. .+.++..+. .+..++|++++..++.++.+ ++.+.+|+..+++
T Consensus 37 va~spdG~~-----l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 107 (301)
T d1l0qa2 37 AVISPDGTK-----VYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMA---SSTLSVIDTTSNT 107 (301)
T ss_dssp EEECTTSSE-----EEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETT---TTEEEEEETTTTE
T ss_pred EEEECCCCE-----EEEEECCCCEEEEEECCCCCEEEEEECCC-CCCCCCCCCCCCCCCCCCCC---CCEEEECCCCCCE
T ss_conf 999289899-----99997899989999999894103200024-64311000111111111111---1001100124302
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCE-EEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC---------
Q ss_conf 124444641100214885068821-203--67279862688857999522454444568998755644568---------
Q 000399 1365 CVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD--------- 1432 (1566)
Q Consensus 1365 ~i~~l~gH~~~V~sIafsp~~~~L-vSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~--------- 1432 (1566)
....+.. .....+++|++++..+ +++ |+.+.+|+..+++....+..+.........+++........
T Consensus 108 ~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (301)
T d1l0qa2 108 VAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVID 186 (301)
T ss_dssp EEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEECCC-CCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCCEEEEEECCCCCEEEECCCCCCCCCCC
T ss_conf 4320244-444237876058971554201111001100014630353156788428886046540131012111111111
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE---CCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf --7887777654435332234660577856430011578773---37617999834783256631687666852468876
Q 000399 1433 --QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI---GNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1566)
Q Consensus 1433 --~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs---~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sV 1507 (1566)
................++++++ ++.++.++ .+++|++||..+++.+..+..+. .+.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~-------~~~~v 249 (301)
T d1l0qa2 187 TVTNSVIDTVKVEAAPSGIAVNPE----------GTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-------DPAGI 249 (301)
T ss_dssp TTTTEEEEEEECSSEEEEEEECTT----------SSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-------SEEEE
T ss_pred CCCEEEEECCCCCCCCCEEECCCC----------CCCCCCCCCCCEEEEEEEEECCCCEEEEEECCCC-------CEEEE
T ss_conf 110001110133577503110111----------1011110021000023236569981999984899-------87799
Q ss_pred HCCCCCCCCCCCCCCCHHHH-HHCCCCCCEEEEEECCCCEEEEEEC
Q ss_conf 21599854479854443578-7035877336776025851477402
Q 000399 1508 CACGSEKMQAGGAVASPSWI-AAGLSSGQCRLFDVRSGNVIASWRA 1552 (1566)
Q Consensus 1508 a~sps~~~~~~~~spdG~~L-aSGs~Dg~I~iWD~rtg~~i~~l~~ 1552 (1566)
+++ |+|+++ ++++.|+.|++||+.++++++++..
T Consensus 250 a~s-----------pdg~~l~va~~~~~~i~v~D~~t~~~~~~~~v 284 (301)
T d1l0qa2 250 AVT-----------PDGKKVYVALSFCNTVSVIDTATNTITATMAV 284 (301)
T ss_dssp EEC-----------TTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEE-----------CCCCEEEEEECCCCEEEEEECCCCEEEEEEEC
T ss_conf 991-----------89899999989999699999999959999968
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=4.9e-20 Score=136.72 Aligned_cols=91 Identities=20% Similarity=0.197 Sum_probs=75.6
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH--CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 6200010000035653000001100111314455666420366666211466653--29986410138960468999873
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE--NGDLPGVMEELPSHTRILVEACI 792 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~--~~~~~~~~~~~s~~~~dlI~~lL 792 (1566)
.+-+||++....| +.++||||+||++|||++|++||.+.+...... ......++..+|+++++||++||
T Consensus 170 ~Y~aPE~~~~~~y---------~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L 240 (337)
T d1o6la_ 170 EYLAPEVLEDNDY---------GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLL 240 (337)
T ss_dssp GGCCGGGGSSSCB---------CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHT
T ss_pred HHHHHHHCCCCCC---------CHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 9966665048988---------8333102230678899878999999699999999852899898668999999998666
Q ss_pred CCCCCCCCC-----CCCCCCCCCCCCC
Q ss_conf 023356887-----4322247876533
Q 000399 793 TKDWTRRPS-----AKSLLESPYFPST 814 (1566)
Q Consensus 793 ~~DP~~R~s-----a~elL~hp~F~~~ 814 (1566)
++||++|++ +.|+++||||...
T Consensus 241 ~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 241 KKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp CSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred CCCCHHHCCCCCCCHHHHHCCCCCCCC
T ss_conf 389344225652349999729150369
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.76 E-value=1.8e-18 Score=127.02 Aligned_cols=75 Identities=9% Similarity=0.034 Sum_probs=54.7
Q ss_pred HCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC
Q ss_conf 00115787733761799983478325663168766685246887621599854479854443578703587733677602
Q 000399 1463 ECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1463 ~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~r 1542 (1566)
+++..++.+. ++.|++||..+++.+..+... ..+.++++ +|||+++++|+.||.|++||+.
T Consensus 261 ~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~-------~~~~~va~-----------s~DG~~l~v~~~d~~v~v~D~~ 321 (346)
T d1jmxb_ 261 PKDPNQIYGV-LNRLAKYDLKQRKLIKAANLD-------HTYYCVAF-----------DKKGDKLYLGGTFNDLAVFNPD 321 (346)
T ss_dssp SSCTTEEEEE-ESEEEEEETTTTEEEEEEECS-------SCCCEEEE-----------CSSSSCEEEESBSSEEEEEETT
T ss_pred CCCCEEEEEC-CCEEEEEECCCCCEEEEECCC-------CCEEEEEE-----------CCCCCEEEEEECCCCEEEEECC
T ss_conf 7997899942-983899989999399997499-------97789999-----------6899999999489929999996
Q ss_pred CCCEEEEEECCCCE
Q ss_conf 58514774025760
Q 000399 1543 SGNVIASWRAHDGY 1556 (1566)
Q Consensus 1543 tg~~i~~l~~H~~~ 1556 (1566)
+++.+.+++...+.
T Consensus 322 t~~~i~~i~~p~g~ 335 (346)
T d1jmxb_ 322 TLEKVKNIKLPGGD 335 (346)
T ss_dssp TTEEEEEEECSSSC
T ss_pred CCCEEEEEECCCCC
T ss_conf 58797999889998
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=7e-20 Score=135.73 Aligned_cols=89 Identities=22% Similarity=0.309 Sum_probs=75.6
Q ss_pred CCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 7620001000003565300000110011131445566642036666621146665---3299864101389604689998
Q 000399 714 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 714 ~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
..+-+||++....| +.++||||+||++|||++|++||.+.+..+.. .....+..+..+|+++++||.+
T Consensus 178 ~~Y~APE~l~~~~~---------~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~s~~l~~li~~ 248 (269)
T d2java1 178 PYYMSPEQMNRMSY---------NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITR 248 (269)
T ss_dssp CSCCCHHHHTTCCC---------CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred CCCCCHHHHCCCCC---------CHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 23279999839999---------938988752789999801889989989999999997189988974359999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCC
Q ss_conf 730233568874322247876
Q 000399 791 CITKDWTRRPSAKSLLESPYF 811 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~hp~F 811 (1566)
||+.||++|||+.|+|+|||+
T Consensus 249 ~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 249 MLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp HTCSSGGGSCCHHHHHTSTTC
T ss_pred HCCCCHHHCCCHHHHHHCCCC
T ss_conf 767995579189999729819
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=6.6e-20 Score=135.89 Aligned_cols=91 Identities=20% Similarity=0.238 Sum_probs=75.9
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH--CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 6200010000035653000001100111314455666420366666211466653--29986410138960468999873
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE--NGDLPGVMEELPSHTRILVEACI 792 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~--~~~~~~~~~~~s~~~~dlI~~lL 792 (1566)
.+-+||++....| +.++||||+||++|||++|++||.+.+...... ....+.+++.+|+++++||.+||
T Consensus 168 ~y~aPE~~~~~~~---------~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~~~s~~~~dli~~~L 238 (320)
T d1xjda_ 168 DYIAPEILLGQKY---------NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLF 238 (320)
T ss_dssp GGCCHHHHTTCCB---------CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHS
T ss_pred CCCCHHHHCCCCC---------CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 7689999827998---------8323201122789898738899999899999999971899897567999999999965
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 02335688743-22247876533
Q 000399 793 TKDWTRRPSAK-SLLESPYFPST 814 (1566)
Q Consensus 793 ~~DP~~R~sa~-elL~hp~F~~~ 814 (1566)
++||++|+|+. |+++||||++.
T Consensus 239 ~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 239 VREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp CSSGGGSBTTBSCGGGSGGGTTC
T ss_pred CCCCCCCCCHHHHHHHCCHHCCC
T ss_conf 44898783889999809013158
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=5.6e-20 Score=136.35 Aligned_cols=110 Identities=18% Similarity=0.191 Sum_probs=77.1
Q ss_pred CCCCHHHHH-HHEE-E-CCCCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH-----
Q ss_conf 646767775-3113-3-2577620001000003565300000110011131445566642036666621146665-----
Q 000399 697 SDIDLEYLL-EHLE-V-EDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL----- 768 (1566)
Q Consensus 697 ~d~~~~s~~-~~~~-~-~~~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~----- 768 (1566)
.||+.+... +... . .+...+-+||++....| +.++||||+||++|||++|++||.+.......
T Consensus 147 ~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y---------~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~ 217 (322)
T d1s9ja_ 147 CDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHY---------SVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGC 217 (322)
T ss_dssp CCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCC---------CTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC---------CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 5487762567886211137714119468758998---------9488899899999999988899899887899999988
Q ss_pred ----------------------------------------HCCCCCCCC-CCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf ----------------------------------------329986410-138960468999873023356887432224
Q 000399 769 ----------------------------------------ENGDLPGVM-EELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1566)
Q Consensus 769 ----------------------------------------~~~~~~~~~-~~~s~~~~dlI~~lL~~DP~~R~sa~elL~ 807 (1566)
.....+..+ ...|++++|||.+||++||++||||.|+|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 218 QVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp ----------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 75177545774212333221111222354134778876650268766764448999999999986899467908999960
Q ss_pred CCCCCCCC
Q ss_conf 78765333
Q 000399 808 SPYFPSTV 815 (1566)
Q Consensus 808 hp~F~~~~ 815 (1566)
||||+...
T Consensus 298 Hpf~~~~~ 305 (322)
T d1s9ja_ 298 HAFIKRSD 305 (322)
T ss_dssp SHHHHHHH
T ss_pred CHHHCCCC
T ss_conf 98647698
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.76 E-value=4.7e-20 Score=136.82 Aligned_cols=94 Identities=17% Similarity=0.189 Sum_probs=76.4
Q ss_pred CCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH--CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 776200010000035653000001100111314455666420366666211466653--299864101389604689998
Q 000399 713 EGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE--NGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 713 ~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~--~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
...+-+||++..+.| +.++||||+||++|||++|++||.+.+...... .......+..+++++++||++
T Consensus 201 t~~Y~APE~~~~~~~---------~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~ 271 (350)
T d1rdqe_ 201 TPEALAPEIILSKGY---------NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRN 271 (350)
T ss_dssp CGGGCCHHHHTTCCB---------CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCCCHHHHCCCCC---------CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 635678899717998---------85331145007899997588998995999999998617988976689999999999
Q ss_pred HHCCCCCCCC-----CCCCCCCCCCCCCCC
Q ss_conf 7302335688-----743222478765333
Q 000399 791 CITKDWTRRP-----SAKSLLESPYFPSTV 815 (1566)
Q Consensus 791 lL~~DP~~R~-----sa~elL~hp~F~~~~ 815 (1566)
||++||.+|+ |+.++|+||||+...
T Consensus 272 ~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~ 301 (350)
T d1rdqe_ 272 LLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301 (350)
T ss_dssp HSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred HHHHCHHHCCCCCCCCHHHHHCCCCCCCCC
T ss_conf 834099860655345499997190515899
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.75 E-value=3.2e-18 Score=125.47 Aligned_cols=231 Identities=10% Similarity=0.066 Sum_probs=156.3
Q ss_pred CCCCCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEE-EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 333467667787517533-2014432137320210037602799-60447885320566873000012444464110021
Q 000399 1301 LGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVF-TAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1566)
Q Consensus 1301 LaTgs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lv-SgS~~~g~DgtVrIWDl~s~~~i~~l~gH~~~V~s 1378 (1566)
.++++.|++|.+||+.++ .++++.. .+....++|+||+++++ +++. ++.|++||+.+++++..+..|.. +..
T Consensus 5 yV~~~~~~~v~v~D~~t~~~~~~i~~-g~~p~~va~spdG~~l~v~~~~----~~~i~v~d~~t~~~~~~~~~~~~-~~~ 78 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAH----SNDVSIIDTATNNVIATVPAGSS-PQG 78 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEEGG----GTEEEEEETTTTEEEEEEECSSS-EEE
T ss_pred EEEECCCCEEEEEECCCCEEEEEEEC-CCCCEEEEEECCCCEEEEEECC----CCEEEEEECCCCCEEEEEECCCC-CCC
T ss_conf 99978999899999999959999988-9983699992898999999789----99899999998941032000246-431
Q ss_pred EEEEECCCCE-EEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCC-----------CCCCCCCCCCCCCC
Q ss_conf 4885068821-203--672798626888579995224544445689987556445-----------68788777765443
Q 000399 1379 ICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN-----------TDQVGMLNSNTLSS 1444 (1566)
Q Consensus 1379 Iafsp~~~~L-vSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~-----------~~~~~~~~~~~~~~ 1444 (1566)
++|++++..+ +++ ++.+.+||..+++....+..+.........+++...... ..............
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (301)
T d1l0qa2 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR 158 (301)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS
T ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEECCCCC
T ss_conf 10001111111111111001100124302432024444423787605897155420111100110001463035315678
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEEEEC-CCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 53322346605778564300115787733-76179998347832566316876668524688762159985447985444
Q 000399 1445 GILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1445 ~V~siafsp~~~t~l~~s~dg~~Lvsgs~-DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spd 1523 (1566)
.+..++++++ ++.+++++. ++.+.+|+....+.......+.. ...++++ ++
T Consensus 159 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-----------~~ 210 (301)
T d1l0qa2 159 SPKGIAVTPD----------GTKVYVANFDSMSISVIDTVTNSVIDTVKVEAA-------PSGIAVN-----------PE 210 (301)
T ss_dssp SEEEEEECTT----------SSEEEEEETTTTEEEEEETTTTEEEEEEECSSE-------EEEEEEC-----------TT
T ss_pred CCEEEEEECC----------CCCEEEECCCCCCCCCCCCCCEEEEECCCCCCC-------CCEEECC-----------CC
T ss_conf 8428886046----------540131012111111111110001110133577-------5031101-----------11
Q ss_pred HHHHHHC---CCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCC
Q ss_conf 3578703---587733677602585147740257604676630159
Q 000399 1524 PSWIAAG---LSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1524 G~~LaSG---s~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPdG 1566 (1566)
|..++.+ ..++.|++||..+++.+..+.. ...+++++|+|||
T Consensus 211 g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~-~~~~~~va~spdg 255 (301)
T d1l0qa2 211 GTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-GPDPAGIAVTPDG 255 (301)
T ss_dssp SSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-CSSEEEEEECTTS
T ss_pred CCCCCCCCCCCEEEEEEEEECCCCEEEEEECC-CCCEEEEEEECCC
T ss_conf 10111100210000232365699819999848-9987799991898
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=1.6e-19 Score=133.55 Aligned_cols=92 Identities=18% Similarity=0.230 Sum_probs=73.1
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH----HC-----CCCC-CCCCCCCCHH
Q ss_conf 620001000003565300000110011131445566642036666621146665----32-----9986-4101389604
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL----EN-----GDLP-GVMEELPSHT 784 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~----~~-----~~~~-~~~~~~s~~~ 784 (1566)
.+-+||++....| +.++||||+||++|||++|++||.+.+..... .. ..++ ..+..+|+++
T Consensus 178 ~y~aPE~~~~~~y---------~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~ 248 (335)
T d2ozaa1 178 YYVAPEVLGPEKY---------DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEV 248 (335)
T ss_dssp SSCCCCCCCGGGG---------SHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHH
T ss_pred CCCCCHHHCCCCC---------CHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
T ss_conf 6379277748988---------8888887645167788658899889887788999999985388888985434699999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6899987302335688743222478765333
Q 000399 785 RILVEACITKDWTRRPSAKSLLESPYFPSTV 815 (1566)
Q Consensus 785 ~dlI~~lL~~DP~~R~sa~elL~hp~F~~~~ 815 (1566)
++||++||++||++|+|+.|+|+||||.+..
T Consensus 249 ~~li~~~L~~dP~~R~s~~eil~hp~~~~~~ 279 (335)
T d2ozaa1 249 KMLIRNLLKTEPTQRMTITEFMNHPWIMQST 279 (335)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSHHHHTTT
T ss_pred HHHHHHHCCCCHHHCCCHHHHHCCHHHHCCC
T ss_conf 9999997569965790999997098761788
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.74 E-value=1.5e-19 Score=133.67 Aligned_cols=95 Identities=18% Similarity=0.181 Sum_probs=76.8
Q ss_pred CCCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHC--CCCCCCCCCCCCHHHHHHH
Q ss_conf 57762000100000356530000011001113144556664203666662114666532--9986410138960468999
Q 000399 712 DEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLEN--GDLPGVMEELPSHTRILVE 789 (1566)
Q Consensus 712 ~~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~~--~~~~~~~~~~s~~~~dlI~ 789 (1566)
|...+-+||++..+.| +.++||||+||++|||++|++||.+.+....... ......++.++++++++|.
T Consensus 163 Gt~~Y~APE~l~~~~y---------~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 233 (316)
T d1fota_ 163 GTPDYIAPEVVSTKPY---------NKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLS 233 (316)
T ss_dssp SCTTTCCHHHHTTCCB---------CTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CCCCCCCHHHHCCCCC---------CCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 7634359999838999---------8043046533368999759899999699999999970898899778999999999
Q ss_pred HHHCCCCCCCC-----CCCCCCCCCCCCCCC
Q ss_conf 87302335688-----743222478765333
Q 000399 790 ACITKDWTRRP-----SAKSLLESPYFPSTV 815 (1566)
Q Consensus 790 ~lL~~DP~~R~-----sa~elL~hp~F~~~~ 815 (1566)
+||++||.+|+ |++++|+||||++..
T Consensus 234 ~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~ 264 (316)
T d1fota_ 234 RLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 264 (316)
T ss_dssp HHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred HHHHHCHHHCCCCCHHHHHHHHCCCCCCCCC
T ss_conf 9954499766643102199998193514679
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=2.8e-19 Score=132.03 Aligned_cols=95 Identities=22% Similarity=0.277 Sum_probs=76.4
Q ss_pred CCCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH--CCCCCCCCCCCCCHHHHHHH
Q ss_conf 5776200010000035653000001100111314455666420366666211466653--29986410138960468999
Q 000399 712 DEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE--NGDLPGVMEELPSHTRILVE 789 (1566)
Q Consensus 712 ~~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~--~~~~~~~~~~~s~~~~dlI~ 789 (1566)
|...+-+||++....| +.++||||+||++|||++|++||.+.+...... ......++..+++++++||+
T Consensus 172 GT~~Y~APE~~~~~~~---------~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~ 242 (288)
T d1uu3a_ 172 GTAQYVSPELLTEKSA---------CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFPKARDLVE 242 (288)
T ss_dssp CCGGGCCHHHHHTCCC---------CHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCTTCCHHHHHHHH
T ss_pred CCCCCCCCEEECCCCC---------CCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 7755258440026898---------9666230456999998038899899599999999971899998547999999999
Q ss_pred HHHCCCCCCCCCCCCC------CCCCCCCCCC
Q ss_conf 8730233568874322------2478765333
Q 000399 790 ACITKDWTRRPSAKSL------LESPYFPSTV 815 (1566)
Q Consensus 790 ~lL~~DP~~R~sa~el------L~hp~F~~~~ 815 (1566)
+||+.||++|+|++|+ ++||||.+..
T Consensus 243 ~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~ 274 (288)
T d1uu3a_ 243 KLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 274 (288)
T ss_dssp TTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred HHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCC
T ss_conf 98557976891978973778987697647899
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.73 E-value=2.1e-19 Score=132.74 Aligned_cols=92 Identities=14% Similarity=0.174 Sum_probs=75.3
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH---CCC--C-CCCCCCCCCHHHHHH
Q ss_conf 6200010000035653000001100111314455666420366666211466653---299--8-641013896046899
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NGD--L-PGVMEELPSHTRILV 788 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~---~~~--~-~~~~~~~s~~~~dlI 788 (1566)
.+-+||++....| +.++||||+||++|||++|++||.+.+..+... ... . ...++.+|+++++||
T Consensus 181 ~y~APE~~~~~~~---------~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 251 (293)
T d1jksa_ 181 EFVAPEIVNYEPL---------GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFI 251 (293)
T ss_dssp GGCCHHHHTTCCB---------CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHCCCCC---------CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHH
T ss_conf 4309999818999---------9766522140999999708899889999999999981688887010478899999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 987302335688743222478765333
Q 000399 789 EACITKDWTRRPSAKSLLESPYFPSTV 815 (1566)
Q Consensus 789 ~~lL~~DP~~R~sa~elL~hp~F~~~~ 815 (1566)
++||+.||++|||+.|+|+||||+...
T Consensus 252 ~~~L~~dP~~R~s~~eil~hp~~~~~~ 278 (293)
T d1jksa_ 252 RRLLVKDPKKRMTIQDSLQHPWIKPKD 278 (293)
T ss_dssp HTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred HHHCCCCHHHCCCHHHHHCCCCCCCCC
T ss_conf 998638966891999996190418887
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.73 E-value=2.8e-19 Score=132.03 Aligned_cols=95 Identities=22% Similarity=0.299 Sum_probs=73.5
Q ss_pred CCCCCCCEEEEEH---CCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH---HCCCCCCC-CCCCCCHH
Q ss_conf 5776200010000---03565300000110011131445566642036666621146665---32998641-01389604
Q 000399 712 DEGSMEYQELLLW---RQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL---ENGDLPGV-MEELPSHT 784 (1566)
Q Consensus 712 ~~~~~g~PEvl~~---~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~---~~~~~~~~-~~~~s~~~ 784 (1566)
|...+-+||++.. ..| +.++||||+||++|||++|++||.+....... .....+.. ...+|+++
T Consensus 173 GT~~Y~APE~~~~~~~~~y---------~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~ 243 (309)
T d1u5ra_ 173 GTPYWMAPEVILAMDEGQY---------DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF 243 (309)
T ss_dssp SCGGGCCHHHHTTTTSCCB---------CTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHH
T ss_pred CCCCCCCHHHHHCCCCCCC---------CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHH
T ss_conf 4766368899834678886---------7214545589999999878899999799999999982899988878889999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6899987302335688743222478765333
Q 000399 785 RILVEACITKDWTRRPSAKSLLESPYFPSTV 815 (1566)
Q Consensus 785 ~dlI~~lL~~DP~~R~sa~elL~hp~F~~~~ 815 (1566)
++||.+||++||++|||+.|+|+||||....
T Consensus 244 ~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~ 274 (309)
T d1u5ra_ 244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (309)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred HHHHHHHCCCCHHHCCCHHHHHHCHHHCCCC
T ss_conf 9999997737965791899997199753789
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.72 E-value=6.6e-17 Score=117.27 Aligned_cols=251 Identities=10% Similarity=-0.050 Sum_probs=151.4
Q ss_pred ECCCCCCCCCCCCCCCCC----------CCCCCCCCCEEEEE-EEHHHHHCCCCC-------EEEEECCCCEEEEEECCC
Q ss_conf 226888788788633334----------67667787517533-201443213732-------021003760279960447
Q 000399 1287 WFPTPAASWDGPDFLGRV----------GGLKDESPWKIKAS-ILSSIRAHHGAL-------RSVAVGQDECTVFTAGIG 1348 (1566)
Q Consensus 1287 ~~fSpdg~~~~~e~LaTg----------s~Dg~I~iWdi~~~-~l~tl~gH~~~V-------~siafspdg~~lvSgS~~ 1348 (1566)
-.|||||++ ++.+ +.++.+.+||..+. .+..+..+.... ..+.|++++..+.....+
T Consensus 71 ~a~SpDG~~-----l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~ 145 (373)
T d2madh_ 71 PVAAHSGSE-----FALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA 145 (373)
T ss_pred EEECCCCCE-----EEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEEC
T ss_conf 798689998-----999960577532124531899997778938889726885136851689708998589937999986
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCE-EEC--CCCEEEEECCCCCEEEEEECCCCC----------
Q ss_conf 8853205668730000124444641100214885068821-203--672798626888579995224544----------
Q 000399 1349 PGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMD---------- 1415 (1566)
Q Consensus 1349 ~g~DgtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~L-vSg--DgtI~IWD~~tg~~i~~l~~h~~~---------- 1415 (1566)
-+..+.+|+..+.+.. .+.....++.++++++.+ ++. |+++.+||...+............
T Consensus 146 --~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (373)
T d2madh_ 146 --AGPAVGLVVQGGSSDD----QLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPA 219 (373)
T ss_pred --CCCCEEEEECCCCEEE----EEECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEE
T ss_conf --9874677623687289----9824520699962899199999479939999747742667886300366753043458
Q ss_pred ------CCCCCCCCCCCCCCCCCCCCCCC---CCCCCCC----------CCCCCCCCHHHHHHHHHHCCCEEEEEECCCE
Q ss_conf ------44568998755644568788777---7654435----------3322346605778564300115787733761
Q 000399 1416 ------SLHGGSPSSSISKINTDQVGMLN---SNTLSSG----------ILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1566)
Q Consensus 1416 ------~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~----------V~siafsp~~~t~l~~s~dg~~Lvsgs~Dgt 1476 (1566)
.......++.+..++........ ....... ...+++++++........++..+++...++.
T Consensus 220 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 299 (373)
T d2madh_ 220 QANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKE 299 (373)
T ss_pred EECCCCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCE
T ss_conf 87899429992589659999768990789776305647578664136741335771499759995488824786258986
Q ss_pred EEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH--HHHHCCCCCCEEEEEECCCCEEEEEECCC
Q ss_conf 7999834783256631687666852468876215998544798544435--78703587733677602585147740257
Q 000399 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS--WIAAGLSSGQCRLFDVRSGNVIASWRAHD 1554 (1566)
Q Consensus 1477 IriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~--~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~ 1554 (1566)
+.+||..+++.+..+... ..+.+++|+ |||+ ++++++.|+.|++||+.+|+.++++.++.
T Consensus 300 v~~~d~~t~~~~~~~~~~-------~~~~~~a~s-----------pDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g 361 (373)
T d2madh_ 300 VTSVTGLVGQTSSQISLG-------HDVDAISVA-----------QDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELG 361 (373)
T ss_pred EEEEECCCCCEEEEECCC-------CCEEEEEEC-----------CCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCC
T ss_conf 999989999698986689-------982589999-----------89998999996799929999999998999988889
Q ss_pred CEEEEEEEECCC
Q ss_conf 604676630159
Q 000399 1555 GYVTKVRIISKR 1566 (1566)
Q Consensus 1555 ~~Vt~lafsPdG 1566 (1566)
...+.+++.+++
T Consensus 362 ~~P~~l~~~~~~ 373 (373)
T d2madh_ 362 SGPQVLSVMNEA 373 (373)
T ss_pred CCCCEEEEECCC
T ss_conf 898189984689
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.71 E-value=5.8e-18 Score=123.83 Aligned_cols=101 Identities=10% Similarity=0.108 Sum_probs=68.1
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEEECC----------CEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 223466057785643001157877337----------6179998347832566316876668524688762159985447
Q 000399 1448 STAFDGNLYTCLHHIECVERLVVGIGN----------GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1566)
Q Consensus 1448 siafsp~~~t~l~~s~dg~~Lvsgs~D----------gtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~ 1517 (1566)
...+.|.....+.+++++..++....+ ..|.+||..+++.+..+... ..+.+++++
T Consensus 243 ~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~-------~~~~~~a~s------- 308 (355)
T d2bbkh_ 243 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-------HEIDSINVS------- 308 (355)
T ss_dssp HTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-------EEECEEEEC-------
T ss_pred EEEEECCCEEEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCC-------CCEEEEEEC-------
T ss_conf 543303510899980799767887406871265179975999867888498996689-------987799992-------
Q ss_pred CCCCCCHH--HHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCC
Q ss_conf 98544435--78703587733677602585147740257604676630159
Q 000399 1518 GGAVASPS--WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1518 ~~~spdG~--~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPdG 1566 (1566)
|+|+ ++++++.|+.|++||+.+|+.++++.++......+.+.++|
T Consensus 309 ----pDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 309 ----QDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355 (355)
T ss_dssp ----CSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEECCCCC
T ss_pred ----CCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCC
T ss_conf ----89996999997899989999999998999992869796589969999
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=5.1e-19 Score=130.37 Aligned_cols=91 Identities=18% Similarity=0.222 Sum_probs=72.9
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH---CC--CCC-CCCCCCCCHHHHHH
Q ss_conf 6200010000035653000001100111314455666420366666211466653---29--986-41013896046899
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE---NG--DLP-GVMEELPSHTRILV 788 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~---~~--~~~-~~~~~~s~~~~dlI 788 (1566)
.+-+||++....| +.++||||+||++|||++|++||.+....+... .. .++ ..++.+|+++++||
T Consensus 168 ~y~ape~~~~~~~---------~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 238 (321)
T d1tkia_ 168 EYYAPEVHQHDVV---------STATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFV 238 (321)
T ss_dssp GGSCHHHHTTCEE---------CHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHH
T ss_pred CCCCCHHCCCCCC---------CCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHH
T ss_conf 2234021048777---------8401130279999999828999999899999999983899988022367899999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98730233568874322247876533
Q 000399 789 EACITKDWTRRPSAKSLLESPYFPST 814 (1566)
Q Consensus 789 ~~lL~~DP~~R~sa~elL~hp~F~~~ 814 (1566)
++||++||++|+|+.|+|+||||.+.
T Consensus 239 ~~~L~~dp~~R~s~~eil~hp~~~~~ 264 (321)
T d1tkia_ 239 DRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp HTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred HHHCCCCHHHCCCHHHHHCCHHHCCC
T ss_conf 99866996689099999639965667
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=2.9e-18 Score=125.69 Aligned_cols=93 Identities=23% Similarity=0.294 Sum_probs=68.6
Q ss_pred CCCCEEEEEHC-CCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH-----CCCC-CC------------
Q ss_conf 62000100000-35653000001100111314455666420366666211466653-----2998-64------------
Q 000399 715 SMEYQELLLWR-QKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE-----NGDL-PG------------ 775 (1566)
Q Consensus 715 ~~g~PEvl~~~-~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~-----~~~~-~~------------ 775 (1566)
.+-+||++... .| ++++||||+||++|||++|++||.+........ .... +.
T Consensus 186 ~Y~aPE~~~~~~~~---------~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 256 (318)
T d3blha1 186 WYRPPELLLGERDY---------GPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYE 256 (318)
T ss_dssp GGCCHHHHTTCSSC---------CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC----
T ss_pred HHHHHHHHCCCCCC---------CCHHHCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHH
T ss_conf 87428997079998---------917870067864661744879989989999999999841899825534432034443
Q ss_pred -----------C-----CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -----------1-----0138960468999873023356887432224787653333
Q 000399 776 -----------V-----MEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVK 816 (1566)
Q Consensus 776 -----------~-----~~~~s~~~~dlI~~lL~~DP~~R~sa~elL~hp~F~~~~~ 816 (1566)
. ....+++++|||.+||++||++|+||.|+|+||||++.+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~ 313 (318)
T d3blha1 257 KLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM 313 (318)
T ss_dssp ---CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSC
T ss_pred HHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 320133445550334044459989999999987389658909999974950156999
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=1.3e-18 Score=127.97 Aligned_cols=92 Identities=23% Similarity=0.288 Sum_probs=69.9
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHH-------------------------
Q ss_conf 6200010000035653000001100111314455666420366666211466653-------------------------
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYLE------------------------- 769 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~~------------------------- 769 (1566)
.+-+||++....| +.++||||+||+++||++|++||.+.+......
T Consensus 183 ~y~aPE~l~~~~~---------~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 253 (355)
T d2b1pa1 183 YYRAPEVILGMGY---------KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV 253 (355)
T ss_dssp TTCCHHHHTTCCC---------CTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHH
T ss_pred CCCCHHHHCCCCC---------CCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 5558133147777---------8774333566257898659899888977889999997205898799987656677776
Q ss_pred -C-CCC-----C------------CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -2-998-----6------------41013896046899987302335688743222478765333
Q 000399 770 -N-GDL-----P------------GVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTV 815 (1566)
Q Consensus 770 -~-~~~-----~------------~~~~~~s~~~~dlI~~lL~~DP~~R~sa~elL~hp~F~~~~ 815 (1566)
. ... + ......+++++|||++||++||++|+||+|+|+||||+...
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~ 318 (355)
T d2b1pa1 254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318 (355)
T ss_dssp HTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCC
T ss_conf 41754356664212643335432101333799999999998769945790899996694208788
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=2.8e-18 Score=125.76 Aligned_cols=92 Identities=18% Similarity=0.201 Sum_probs=69.8
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHH---H---HCCCCCCCCCCCCCHHHHHHH
Q ss_conf 2000100000356530000011001113144556664203666662114666---5---329986410138960468999
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVY---L---ENGDLPGVMEELPSHTRILVE 789 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~---~---~~~~~~~~~~~~s~~~~dlI~ 789 (1566)
.-+||++....+ .++.++||||+||++|||++|++||.+....+. + .....+..++..++++++||+
T Consensus 196 ~~~pe~~~~~~~-------~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~ 268 (322)
T d1vzoa_ 196 YMAPDIVRGGDS-------GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQ 268 (322)
T ss_dssp TCCHHHHTTCC----------CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHH
T ss_pred CCHHHHHHCCCC-------CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
T ss_conf 310687605776-------8871325177779999997689998888777799999983356899886547999999999
Q ss_pred HHHCCCCCCCC-----CCCCCCCCCCCCCC
Q ss_conf 87302335688-----74322247876533
Q 000399 790 ACITKDWTRRP-----SAKSLLESPYFPST 814 (1566)
Q Consensus 790 ~lL~~DP~~R~-----sa~elL~hp~F~~~ 814 (1566)
+||++||++|+ ||+|+|+||||+..
T Consensus 269 ~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 269 RLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp HHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHCCCCHHHCCCCCCCCHHHHHCCHHHCCC
T ss_conf 974458988199974509999749723489
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.65 E-value=2.7e-16 Score=113.46 Aligned_cols=250 Identities=9% Similarity=0.032 Sum_probs=139.1
Q ss_pred CCCCCEEC--CCCCCCCCCCCCC-CCCCCCCCCCCCEEEEE-EEHHH---HHCCCCCEEEEECCCCEEEEEECCCCCCCC
Q ss_conf 48983022--6888788788633-33467667787517533-20144---321373202100376027996044788532
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFL-GRVGGLKDESPWKIKAS-ILSSI---RAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1281 ~H~~wV~~--fSpdg~~~~~e~L-aTgs~Dg~I~iWdi~~~-~l~tl---~gH~~~V~siafspdg~~lvSgS~~~g~Dg 1353 (1566)
.|.+.+.. |||||++ | ++++.|+.|++|++... ...+. ..+...+..++|+||++++++++.+ ++
T Consensus 34 ~~~~~v~~la~spDG~~-----L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~---~~ 105 (333)
T d1ri6a_ 34 DVPGQVQPMVVSPDKRY-----LYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYN---AG 105 (333)
T ss_dssp ECSSCCCCEEECTTSSE-----EEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETT---TT
T ss_pred CCCCCEEEEEEECCCCE-----EEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEEECCCC---CC
T ss_conf 57998868999589799-----99997789969999996898707985301369985499995999887420568---88
Q ss_pred CEEEEEECCCCCCC--CCCCCCCCCCCEEEEECCCCEEEC---CCCEEEEECCCCCEEEEEECCCCC-------CCCCCC
Q ss_conf 05668730000124--444641100214885068821203---672798626888579995224544-------445689
Q 000399 1354 TVQKWELTRINCVS--GYYGHEEVVNDICVLSSSGRIASC---DGTLHVWNSQTGKLLSVFAEQSMD-------SLHGGS 1421 (1566)
Q Consensus 1354 tVrIWDl~s~~~i~--~l~gH~~~V~sIafsp~~~~LvSg---DgtI~IWD~~tg~~i~~l~~h~~~-------~~~~~~ 1421 (1566)
+|.+|+........ ....+...+.++.++++++.++.+ +..|.+|+................ ......
T Consensus 106 ~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~ 185 (333)
T d1ri6a_ 106 NVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFH 185 (333)
T ss_dssp EEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEEC
T ss_pred CEEEECCCCCCCEECCCCCCCCCCCEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCEEEECEEEEEECCCCCCEEEEE
T ss_conf 30220011100000010037785314988630101310256554205689732687410010001334038875279996
Q ss_pred CCCCCCCCCCCCCC------------CC----------CCCCCCCCCCCCCCCCHHHHHHHHHHCCCE-EEEEECCCEEE
Q ss_conf 98755644568788------------77----------776544353322346605778564300115-78773376179
Q 000399 1422 PSSSISKINTDQVG------------ML----------NSNTLSSGILSTAFDGNLYTCLHHIECVER-LVVGIGNGSLR 1478 (1566)
Q Consensus 1422 ~~~~i~~~~~~~~~------------~~----------~~~~~~~~V~siafsp~~~t~l~~s~dg~~-Lvsgs~DgtIr 1478 (1566)
+++........... .. ...........++++++ +++ ++++..++.+.
T Consensus 186 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d----------~~~~~~~~~~~~~~~ 255 (333)
T d1ri6a_ 186 PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPD----------GRHLYACDRTASLIT 255 (333)
T ss_dssp TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTT----------SSEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEECC----------CCCEEEECCCCCEEE
T ss_conf 0201478620466721788510355520210022343068776553126899515----------672055045688278
Q ss_pred EEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHH-CCCCCCEEEEE--ECCCCE--EEEEECC
Q ss_conf 998347832566316876668524688762159985447985444357870-35877336776--025851--4774025
Q 000399 1479 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAA-GLSSGQCRLFD--VRSGNV--IASWRAH 1553 (1566)
Q Consensus 1479 iWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaS-Gs~Dg~I~iWD--~rtg~~--i~~l~~H 1553 (1566)
+|++...........+... ...++.+++ +|+|+++++ ++.++.|++|+ ..+|++ +..+..-
T Consensus 256 ~~~~~~~~~~~~~~~~~~~---~~~p~~~a~-----------spDGk~l~va~~~~~~v~v~~id~~tG~l~~~~~~~~g 321 (333)
T d1ri6a_ 256 VFSVSEDGSVLSKEGFQPT---ETQPRGFNV-----------DHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG 321 (333)
T ss_dssp EEEECTTSCCEEEEEEEEC---SSSCCCEEE-----------CTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS
T ss_pred EEEECCCCCEEEEEEEECC---CCCEEEEEE-----------ECCCCEEEEEECCCCEEEEEEEECCCCCEEEEEECCCC
T ss_conf 7887399978999999678---997628999-----------07989999998899939999997999968999833479
Q ss_pred CCEEEEEEEE
Q ss_conf 7604676630
Q 000399 1554 DGYVTKVRII 1563 (1566)
Q Consensus 1554 ~~~Vt~lafs 1563 (1566)
+. ..+|+++
T Consensus 322 ~~-p~~v~~~ 330 (333)
T d1ri6a_ 322 QG-PMWVVVN 330 (333)
T ss_dssp SS-CCEEEEE
T ss_pred CC-CCEEEEE
T ss_conf 99-8599997
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=99.63 E-value=2.1e-17 Score=120.33 Aligned_cols=92 Identities=25% Similarity=0.346 Sum_probs=67.6
Q ss_pred CCCEEEEEHC-CCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHH-H----------------HHHHCC------
Q ss_conf 2000100000-356530000011001113144556664203666662114-6----------------665329------
Q 000399 716 MEYQELLLWR-QKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISL-A----------------VYLENG------ 771 (1566)
Q Consensus 716 ~g~PEvl~~~-~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~-~----------------~~~~~~------ 771 (1566)
.-+||++... .| +.++||||+||++|||++|++||..... . .+....
T Consensus 195 y~aPE~~~~~~~~---------~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~ 265 (328)
T d3bqca1 195 FKGPELLVDYQMY---------DYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265 (328)
T ss_dssp GCCHHHHTTCCCC---------CTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCG
T ss_pred CCCCCCCCCCCCC---------CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
T ss_conf 2476102688888---------8452323354555876048899988760189999999987884155555422544474
Q ss_pred ------------C-----CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------------9-----86410138960468999873023356887432224787653333
Q 000399 772 ------------D-----LPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVK 816 (1566)
Q Consensus 772 ------------~-----~~~~~~~~s~~~~dlI~~lL~~DP~~R~sa~elL~hp~F~~~~~ 816 (1566)
. .......++++++|||++||++||++|+||+|+|+||||++..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~ 327 (328)
T d3bqca1 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 327 (328)
T ss_dssp GGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred CCCHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCC
T ss_conf 30000033343311211552112448999999999986699568908999964935588797
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.63 E-value=4.2e-18 Score=124.74 Aligned_cols=94 Identities=22% Similarity=0.311 Sum_probs=69.1
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHH----------H-----------HHC---
Q ss_conf 6200010000035653000001100111314455666420366666211466----------6-----------532---
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAV----------Y-----------LEN--- 770 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~----------~-----------~~~--- 770 (1566)
..-+||++....| +.++||||+||+++||++|++||.+..... . ...
T Consensus 194 ~y~aPE~~~~~~~---------~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~ 264 (362)
T d1q8ya_ 194 EYRSPEVLLGAPW---------GCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKY 264 (362)
T ss_dssp GGCCHHHHHTCCC---------CTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTT
T ss_pred CCCCHHHCCCCCC---------CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCC
T ss_conf 1057132146677---------7643201237899999878899898755432102689999999837998788624532
Q ss_pred -------C----CC---------------CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -------9----98---------------64101389604689998730233568874322247876533332
Q 000399 771 -------G----DL---------------PGVMEELPSHTRILVEACITKDWTRRPSAKSLLESPYFPSTVKS 817 (1566)
Q Consensus 771 -------~----~~---------------~~~~~~~s~~~~dlI~~lL~~DP~~R~sa~elL~hp~F~~~~~~ 817 (1566)
. .. .......+++++|||.+||++||.+||||+|+|+||||++....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~~~ 337 (362)
T d1q8ya_ 265 TRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGM 337 (362)
T ss_dssp HHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTTC
T ss_pred CCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCC
T ss_conf 2000132012202432357764442100015674358999999999877994579089999669340789874
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.61 E-value=3e-15 Score=107.01 Aligned_cols=251 Identities=8% Similarity=-0.033 Sum_probs=150.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-EEHHHH-HCCCCCEEEEECCCCEEEE-EECCCCCCCCCEEEEEECCCC
Q ss_conf 2688878878863333467667787517533-201443-2137320210037602799-604478853205668730000
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIR-AHHGALRSVAVGQDECTVF-TAGIGPGFKGTVQKWELTRIN 1364 (1566)
Q Consensus 1288 ~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~-gH~~~V~siafspdg~~lv-SgS~~~g~DgtVrIWDl~s~~ 1364 (1566)
+|++++.+ +++++.|++|.+||+.+. .+.++. .|...+.+++|+||+++++ +++. |+.|++||+.+++
T Consensus 3 a~~~~~~~-----l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~----~~~v~~~d~~t~~ 73 (346)
T d1jmxb_ 3 ALKAGHEY-----MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH----YGDIYGIDLDTCK 73 (346)
T ss_dssp CCCTTCEE-----EEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT----TTEEEEEETTTTE
T ss_pred CCCCCCCE-----EEEECCCCEEEEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEECC----CCCEEEEECCCCE
T ss_conf 58899969-----99986999799999999989999994899970459997898999999789----9939999675671
Q ss_pred CCCCCC------CCCCCCCCEEEEECCCCEE-E-------------CCCCEEEEECCCCCEEEEEECCC---CCCCCCCC
Q ss_conf 124444------6411002148850688212-0-------------36727986268885799952245---44445689
Q 000399 1365 CVSGYY------GHEEVVNDICVLSSSGRIA-S-------------CDGTLHVWNSQTGKLLSVFAEQS---MDSLHGGS 1421 (1566)
Q Consensus 1365 ~i~~l~------gH~~~V~sIafsp~~~~Lv-S-------------gDgtI~IWD~~tg~~i~~l~~h~---~~~~~~~~ 1421 (1566)
.+..+. .+...+..++|+++++++. + .+..+.+||..+++....+..+. ........
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (346)
T d1jmxb_ 74 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 153 (346)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEEC
T ss_pred EEEEECCCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEC
T ss_conf 31231036543454774179999058888999705775215651467624899852563265688731024743999952
Q ss_pred CCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH----------------HHHHCCCEEEEEECCCEEE
Q ss_conf 9875564-------4568788777765443533223466057785----------------6430011578773376179
Q 000399 1422 PSSSISK-------INTDQVGMLNSNTLSSGILSTAFDGNLYTCL----------------HHIECVERLVVGIGNGSLR 1478 (1566)
Q Consensus 1422 ~~~~i~~-------~~~~~~~~~~~~~~~~~V~siafsp~~~t~l----------------~~s~dg~~Lvsgs~DgtIr 1478 (1566)
.++.+.. ++..................+.++|+..... ....+...+.++..++.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (346)
T d1jmxb_ 154 DDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYL 233 (346)
T ss_dssp TTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEE
T ss_pred CCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCEEE
T ss_conf 78789984796269980699789999648986623771255289998649981676512311126732575404783499
Q ss_pred EEECCCCCEEEEE-CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEE
Q ss_conf 9983478325663-168766685246887621599854479854443578703587733677602585147740257604
Q 000399 1479 FIDINQGQKLHLW-RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYV 1557 (1566)
Q Consensus 1479 iWDi~sg~~l~~l-~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~V 1557 (1566)
+||..++...... ..+. ..+.++.++ +++.+++.+. ++.+++||..+++.+.... +...+
T Consensus 234 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~-----------~~~~~~~~~~-~~~v~v~d~~~~~~~~~~~-~~~~~ 294 (346)
T d1jmxb_ 234 SVDLKTGKTHTQEFADLT------ELYFTGLRS-----------PKDPNQIYGV-LNRLAKYDLKQRKLIKAAN-LDHTY 294 (346)
T ss_dssp EEETTTCCEEEEEEEECS------SCEEEEEEC-----------SSCTTEEEEE-ESEEEEEETTTTEEEEEEE-CSSCC
T ss_pred EEECCCCCEEEEEEECCC------CEEEEEEEE-----------CCCCEEEEEC-CCEEEEEECCCCCEEEEEC-CCCCE
T ss_conf 997778836878763156------606888971-----------7997899942-9838999899993999974-99977
Q ss_pred EEEEEECCC
Q ss_conf 676630159
Q 000399 1558 TKVRIISKR 1566 (1566)
Q Consensus 1558 t~lafsPdG 1566 (1566)
.+++|+|||
T Consensus 295 ~~va~s~DG 303 (346)
T d1jmxb_ 295 YCVAFDKKG 303 (346)
T ss_dssp CEEEECSSS
T ss_pred EEEEECCCC
T ss_conf 899996899
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.55 E-value=3.6e-14 Score=100.29 Aligned_cols=243 Identities=10% Similarity=0.064 Sum_probs=134.9
Q ss_pred CCCCCCCCCCCCCCEEEEE-EEH--HHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCC---CC
Q ss_conf 3333467667787517533-201--44321373202100376027996044788532056687300001244446---41
Q 000399 1300 FLGRVGGLKDESPWKIKAS-ILS--SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYG---HE 1373 (1566)
Q Consensus 1300 ~LaTgs~Dg~I~iWdi~~~-~l~--tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~l~g---H~ 1373 (1566)
++++++.|++|++|++... .+. ....|.+.+.+++|+||+++|++++.+ |+.|++|++........+.+ +.
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~---d~~i~~~~i~~~~~~~~~~~~~~~~ 82 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP---EFRVLAYRIAPDDGALTFAAESALP 82 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT---TTEEEEEEECTTTCCEEEEEEEECS
T ss_pred EEEECCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECC---CCEEEEEEEECCCCCEEEEEECCCC
T ss_conf 9998789993899998399976999997579988689995897999999778---9969999996898707985301369
Q ss_pred CCCCCEEEEECCCCEEEC---CCCEEEEECCCCCEEEEEEC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCCC-------
Q ss_conf 100214885068821203---67279862688857999522--45444-456899875564456878877776-------
Q 000399 1374 EVVNDICVLSSSGRIASC---DGTLHVWNSQTGKLLSVFAE--QSMDS-LHGGSPSSSISKINTDQVGMLNSN------- 1440 (1566)
Q Consensus 1374 ~~V~sIafsp~~~~LvSg---DgtI~IWD~~tg~~i~~l~~--h~~~~-~~~~~~~~~i~~~~~~~~~~~~~~------- 1440 (1566)
..+..++|+|++++++++ +++|.+|+............ +.... .....+++............+..+
T Consensus 83 ~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~ 162 (333)
T d1ri6a_ 83 GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 162 (333)
T ss_dssp SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCCEEEEECCCCCEEEECCCCCCCEEEECCCCCCCEECCCCCCCCCCCEEEEEEECCEEEECCCCCCCEEEEEEECCCCC
T ss_conf 98549999599988742056888302200111000000100377853149886301013102565542056897326874
Q ss_pred -----------CCCCCCCCCCCCCHHHHHHHHHHCCCEEE-EEECCCEEEEEECCCCCE----EEEECCCCCCCCCHHHH
Q ss_conf -----------54435332234660577856430011578-773376179998347832----56631687666852468
Q 000399 1441 -----------TLSSGILSTAFDGNLYTCLHHIECVERLV-VGIGNGSLRFIDINQGQK----LHLWRGEPTELGFPSLV 1504 (1566)
Q Consensus 1441 -----------~~~~~V~siafsp~~~t~l~~s~dg~~Lv-sgs~DgtIriWDi~sg~~----l~~l~~h~~~v~~~~~V 1504 (1566)
........++|+++ +..++ +....+...+|+...... .................
T Consensus 163 ~~~~~~~~~~~~~g~~p~~i~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (333)
T d1ri6a_ 163 LVAQDPAEVTTVEGAGPRHMVFHPN----------EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWA 232 (333)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTT----------SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCE
T ss_pred CEEEECEEEEEECCCCCCEEEEECC----------CEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCC
T ss_conf 1001000133403887527999602----------014786204667217885103555202100223430687765531
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHH-HHCCCCCCEEEEEECCCCEEEEEE---CCCCEEEEEEEECCC
Q ss_conf 87621599854479854443578-703587733677602585147740---257604676630159
Q 000399 1505 SAICACGSEKMQAGGAVASPSWI-AAGLSSGQCRLFDVRSGNVIASWR---AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1505 ~sVa~sps~~~~~~~~spdG~~L-aSGs~Dg~I~iWD~rtg~~i~~l~---~H~~~Vt~lafsPdG 1566 (1566)
..++ ++++++++ +++..++.+.+|+........... .....+..++|+|||
T Consensus 233 ~~~~-----------~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDG 287 (333)
T d1ri6a_ 233 ADIH-----------ITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG 287 (333)
T ss_dssp EEEE-----------ECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS
T ss_pred EEEE-----------EECCCCCEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEECCC
T ss_conf 2689-----------951567205504568827878873999789999996789976289990798
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=6e-16 Score=111.36 Aligned_cols=85 Identities=21% Similarity=0.194 Sum_probs=68.9
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHH----HHHHCCCCCCCCCCCCCHHHHHHH
Q ss_conf 6200010000035653000001100111314455666420-36666621146----665329986410138960468999
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLA----VYLENGDLPGVMEELPSHTRILVE 789 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~----~~~~~~~~~~~~~~~s~~~~dlI~ 789 (1566)
..-+||++....| +.++||||+||++|||++ |++||.+.... ........+..+...|+++++||.
T Consensus 231 ~y~aPE~l~~~~~---------~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~ 301 (325)
T d1rjba_ 231 KWMAPESLFEGIY---------TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQ 301 (325)
T ss_dssp GGCCHHHHHHCCC---------CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHH
T ss_pred CCCCHHHHCCCCC---------CCCEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 6578388727999---------9633030003999999838999999989899999998569989988767899999999
Q ss_pred HHHCCCCCCCCCCCCCCCC
Q ss_conf 8730233568874322247
Q 000399 790 ACITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 790 ~lL~~DP~~R~sa~elL~h 808 (1566)
+||+.||++|||++|+++|
T Consensus 302 ~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 302 SCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHCCCCHHHCCCHHHHHHH
T ss_conf 9758896689399999999
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=9.1e-16 Score=110.21 Aligned_cols=85 Identities=20% Similarity=0.278 Sum_probs=70.1
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 6200010000035653000001100111314455666420-36666621146665---3299864101389604689998
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
.+-+||++....| +.++||||+||++|||++ |++||.+.+..+.. .....+..++.+|+.+++||.+
T Consensus 174 ~y~apE~l~~~~~---------~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~ 244 (273)
T d1mp8a_ 174 KWMAPESINFRRF---------TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLMTK 244 (273)
T ss_dssp GGCCHHHHHHCCC---------SHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCCHHHHHCCCCC---------CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 1032667516998---------8745244424789999826999988899999999998189998987779999999999
Q ss_pred HHCCCCCCCCCCCCCCCC
Q ss_conf 730233568874322247
Q 000399 791 CITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~h 808 (1566)
||..||++|||+.|++++
T Consensus 245 cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 245 CWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HCCCCHHHCCCHHHHHHH
T ss_conf 768797689299999999
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.52 E-value=7.8e-16 Score=110.63 Aligned_cols=91 Identities=19% Similarity=0.238 Sum_probs=68.7
Q ss_pred CCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH----HCCCCC--CCCCCCCCHHHH
Q ss_conf 77620001000003565300000110011131445566642036666621146665----329986--410138960468
Q 000399 713 EGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL----ENGDLP--GVMEELPSHTRI 786 (1566)
Q Consensus 713 ~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~----~~~~~~--~~~~~~s~~~~d 786 (1566)
...+-+||++....| +.++||||+||++|||++|++||.+.+..+.. .....+ ...+.+|+++++
T Consensus 177 t~~Y~aPE~~~~~~~---------~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~ 247 (277)
T d1o6ya_ 177 TAQYLSPEQARGDSV---------DARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA 247 (277)
T ss_dssp --TTCCHHHHTTCCC---------CHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHH
T ss_pred CCCCCCHHHHCCCCC---------CCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHH
T ss_conf 624369999839999---------96632026528999997697998996999999999846999971003478999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99987302335688743222478765
Q 000399 787 LVEACITKDWTRRPSAKSLLESPYFP 812 (1566)
Q Consensus 787 lI~~lL~~DP~~R~sa~elL~hp~F~ 812 (1566)
||.+||++||++||+..+.|.|+|.+
T Consensus 248 li~~~L~~dp~~R~~sa~~l~~~l~r 273 (277)
T d1o6ya_ 248 VVLKALAKNPENRYQTAAEMRADLVR 273 (277)
T ss_dssp HHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHCCCCHHHCHHHHHHHHHHHHH
T ss_conf 99998667976777399999999999
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.51 E-value=3.2e-14 Score=100.59 Aligned_cols=253 Identities=9% Similarity=-0.008 Sum_probs=131.6
Q ss_pred EECCCCCCCC-----CCCCCCCCCCCCCCCCCCEEEEE-EEHHHHHC-------CCCCEEEEECCCCEEEEEECCCCCCC
Q ss_conf 0226888788-----78863333467667787517533-20144321-------37320210037602799604478853
Q 000399 1286 FWFPTPAASW-----DGPDFLGRVGGLKDESPWKIKAS-ILSSIRAH-------HGALRSVAVGQDECTVFTAGIGPGFK 1352 (1566)
Q Consensus 1286 V~~fSpdg~~-----~~~e~LaTgs~Dg~I~iWdi~~~-~l~tl~gH-------~~~V~siafspdg~~lvSgS~~~g~D 1352 (1566)
.-.++|||++ .....+++|+.|+.|.+||..+. .+..+..+ ......++|+||+++++.+..+ +
T Consensus 69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~---~ 145 (368)
T d1mdah_ 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG---S 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS---S
T ss_pred CCEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECC---C
T ss_conf 5139899988999755676401035678699998999938306437854210246886405887899899999689---9
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCC-CE--EECCCCEEEEECCCCCEEEEEECCCCC------C-------
Q ss_conf 2056687300001244446411002148850688-21--203672798626888579995224544------4-------
Q 000399 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSG-RI--ASCDGTLHVWNSQTGKLLSVFAEQSMD------S------- 1416 (1566)
Q Consensus 1353 gtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~-~L--vSgDgtI~IWD~~tg~~i~~l~~h~~~------~------- 1416 (1566)
+++.+||+.+.+....+..+.... +.+.+. .+ .+.||++..|+...+............ .
T Consensus 146 ~~v~~~d~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (368)
T d1mdah_ 146 SAAAGLSVPGASDDQLTKSASCFH----IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY 221 (368)
T ss_dssp SCEEEEEETTTEEEEEEECSSCCC----CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT
T ss_pred CEEEEEECCCCCEEEEEECCCCCE----ECCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCC
T ss_conf 859999899893867860467523----7469982399994899889998268962666530311135666466010155
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEC---------CCEEEEEEC
Q ss_conf --45689987556445687887777---6544353322346605778564300115787733---------761799983
Q 000399 1417 --LHGGSPSSSISKINTDQVGMLNS---NTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG---------NGSLRFIDI 1482 (1566)
Q Consensus 1417 --~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~---------DgtIriWDi 1482 (1566)
.......+.+..++......... ...........+.+.+...+.+++++..+..... ...|.+||.
T Consensus 222 ~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~ 301 (368)
T d1mdah_ 222 PGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTA 301 (368)
T ss_dssp TTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEES
T ss_pred CCEEEEECCCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEEC
T ss_conf 86899934897799960699369976024654304554012788356887179987999835897334058864999989
Q ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH--HHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEE
Q ss_conf 4783256631687666852468876215998544798544435--78703587733677602585147740257604676
Q 000399 1483 NQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS--WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKV 1560 (1566)
Q Consensus 1483 ~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~--~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~l 1560 (1566)
.+++.+..+... ..+.+++++ |||+ .+++++.|+.|++||..+|+.+.+++.. ..-+.|
T Consensus 302 ~t~~~~~~~~~~-------~~~~~~a~s-----------pDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g-~~P~~l 362 (368)
T d1mdah_ 302 SVGQTSGPISNG-------HDSDAIIAA-----------QDGASDNYANSAGTEVLDIYDAASDQDQSSVELD-KGPESL 362 (368)
T ss_dssp SSCCEEECCEEE-------EEECEEEEC-----------CSSSCEEEEEETTTTEEEEEESSSCEEEEECCCC-SCCCEE
T ss_pred CCCCEEEEECCC-------CCEEEEEEC-----------CCCCEEEEEEECCCCEEEEEECCCCCEEEEEECC-CCCCEE
T ss_conf 999486895589-------965179999-----------8999899999489996999989999799998799-998789
Q ss_pred EEEC
Q ss_conf 6301
Q 000399 1561 RIIS 1564 (1566)
Q Consensus 1561 afsP 1564 (1566)
++-+
T Consensus 363 ~~~~ 366 (368)
T d1mdah_ 363 SVQN 366 (368)
T ss_dssp ECCC
T ss_pred EEEC
T ss_conf 9734
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=2e-15 Score=108.16 Aligned_cols=104 Identities=22% Similarity=0.206 Sum_probs=77.7
Q ss_pred CCCCHHHHHHHEEE-------CCCCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHH--
Q ss_conf 64676777531133-------25776200010000035653000001100111314455666420-366666211466--
Q 000399 697 SDIDLEYLLEHLEV-------EDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAV-- 766 (1566)
Q Consensus 697 ~d~~~~s~~~~~~~-------~~~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~-- 766 (1566)
.||+++.....-.. .+....-+||++....| +.++||||+||++|||++ |.+||.+.....
T Consensus 153 ~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~---------~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~ 223 (317)
T d1xkka_ 153 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY---------THQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 223 (317)
T ss_dssp CCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH
T ss_pred ECCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCC---------CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 02552223354445322365105864467088746999---------835654407999999997799999999989999
Q ss_pred -HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf -6532998641013896046899987302335688743222478
Q 000399 767 -YLENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLESP 809 (1566)
Q Consensus 767 -~~~~~~~~~~~~~~s~~~~dlI~~lL~~DP~~R~sa~elL~hp 809 (1566)
.+..+..+..++..++++++|+.+|++.||++|||+.|+++|.
T Consensus 224 ~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l 267 (317)
T d1xkka_ 224 SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEF 267 (317)
T ss_dssp HHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf 99975998999855689999999984789934691999999999
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=9.2e-16 Score=110.19 Aligned_cols=88 Identities=22% Similarity=0.314 Sum_probs=71.0
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHH---HHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 200010000035653000001100111314455666420-3666662114666---532998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~---~~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
.-+||++....| +.++||||+||++|||++ |++||.+....+. +.....+..+...|+++++||.+|
T Consensus 176 y~APE~l~~~~~---------~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~c 246 (277)
T d1xbba_ 176 WYAPECINYYKF---------SSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLC 246 (277)
T ss_dssp GCCHHHHHHCEE---------EHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred ECCCHHHCCCCC---------CCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 039166537999---------84344303403132896589999999899999999982899999865679999999997
Q ss_pred HCCCCCCCCCCCCC---CCCCCCC
Q ss_conf 30233568874322---2478765
Q 000399 792 ITKDWTRRPSAKSL---LESPYFP 812 (1566)
Q Consensus 792 L~~DP~~R~sa~el---L~hp~F~ 812 (1566)
++.||++|||+.++ |+|+|+.
T Consensus 247 l~~dp~~RPs~~~i~~~L~~~~~~ 270 (277)
T d1xbba_ 247 WTYDVENRPGFAAVELRLRNYYYD 270 (277)
T ss_dssp TCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHCCCHHHHHHHHHCHHHH
T ss_conf 588976890989999985288750
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=8.1e-16 Score=110.54 Aligned_cols=90 Identities=19% Similarity=0.261 Sum_probs=71.3
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 6200010000035653000001100111314455666420-36666621146665---3299864101389604689998
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
.+-+||++....| +.++||||+||++|||++ |+|||.+....... .....+..+...++++++|+.+
T Consensus 175 ~y~APE~~~~~~~---------~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~ 245 (272)
T d1qpca_ 175 KWTAPEAINYGTF---------TIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRL 245 (272)
T ss_dssp TTSCHHHHHHCEE---------CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCHHHHHCCCC---------CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 4458289837999---------8245645257999999968988888889999999997068888965571999999999
Q ss_pred HHCCCCCCCCCCCCCCC--CCCCCC
Q ss_conf 73023356887432224--787653
Q 000399 791 CITKDWTRRPSAKSLLE--SPYFPS 813 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~--hp~F~~ 813 (1566)
||+.||++|||+.|+++ ++||..
T Consensus 246 cl~~~P~~Rpt~~ei~~~L~~~fts 270 (272)
T d1qpca_ 246 CWKERPEDRPTFDYLRSVLEDFFTA 270 (272)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HCCCCHHHCCCHHHHHHHHHHHHHC
T ss_conf 7588976893999999986113213
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.50 E-value=3.2e-15 Score=106.81 Aligned_cols=86 Identities=24% Similarity=0.244 Sum_probs=70.2
Q ss_pred CCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHH
Q ss_conf 76200010000035653000001100111314455666420-36666621146665---329986410138960468999
Q 000399 714 GSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVE 789 (1566)
Q Consensus 714 ~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~ 789 (1566)
...-+||++....| +.++||||+||++|||++ |++||.+....+.. .....+..++..++.+++||+
T Consensus 164 ~~y~aPE~l~~~~~---------t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~ 234 (262)
T d1byga_ 164 VKWTAPEALREKKF---------STKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMK 234 (262)
T ss_dssp TTTSCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHH
T ss_pred CCCCCHHHHHCCCC---------CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 46778178727988---------858877757999999997899999999999999999808999997657999999999
Q ss_pred HHHCCCCCCCCCCCCCCCC
Q ss_conf 8730233568874322247
Q 000399 790 ACITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 790 ~lL~~DP~~R~sa~elL~h 808 (1566)
+|+..||++|||+.+++++
T Consensus 235 ~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 235 NCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp HHTCSSGGGSCCHHHHHHH
T ss_pred HHCCCCHHHCCCHHHHHHH
T ss_conf 9756697689399999999
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.49 E-value=2.3e-15 Score=107.67 Aligned_cols=84 Identities=18% Similarity=0.224 Sum_probs=68.5
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC-CCCCCCHHHH----HHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 2000100000356530000011001113144556664203-6666621146----6653299864101389604689998
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR-RPLFDSISLA----VYLENGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g-~ppF~~~~~~----~~~~~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
+-+||++....| +.++||||+||++|||+++ .+||.+.... ........+..+...++++++||.+
T Consensus 202 y~APE~l~~~~~---------~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 272 (299)
T d1ywna1 202 WMAPETIFDRVY---------TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD 272 (299)
T ss_dssp GCCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred CCCHHHHHCCCC---------CCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 020368646889---------96632213678999998688999989998999999996389888886578999999999
Q ss_pred HHCCCCCCCCCCCCCCCC
Q ss_conf 730233568874322247
Q 000399 791 CITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~h 808 (1566)
||+.||++|||+.|+++|
T Consensus 273 cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 273 CWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HCCCCHHHCCCHHHHHHH
T ss_conf 767796679199999999
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=1.6e-15 Score=108.72 Aligned_cols=89 Identities=18% Similarity=0.304 Sum_probs=72.0
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHH---HHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 200010000035653000001100111314455666420-3666662114666---532998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~---~~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
.-+||++....| +.++||||+||++|||++ |++||.+....+. +..+..+..++.+|+++.+||.+|
T Consensus 178 y~aPE~~~~~~~---------~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c 248 (285)
T d1u59a_ 178 WYAPECINFRKF---------SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDC 248 (285)
T ss_dssp GCCHHHHHHCEE---------CHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred CCCHHHHHCCCC---------CCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 358688727999---------95412322017899999389999999799999999981899999976789999999997
Q ss_pred HCCCCCCCCCCCCC---CCCCCCCC
Q ss_conf 30233568874322---24787653
Q 000399 792 ITKDWTRRPSAKSL---LESPYFPS 813 (1566)
Q Consensus 792 L~~DP~~R~sa~el---L~hp~F~~ 813 (1566)
|..||++|||+.++ |+|+|+.-
T Consensus 249 l~~~p~~RPs~~~i~~~L~~~~~~~ 273 (285)
T d1u59a_ 249 WIYKWEDRPDFLTVEQRMRACYYSL 273 (285)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCHHHCCCHHHHHHHHHHHHHHH
T ss_conf 5779768909999999999999985
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.48 E-value=5.4e-15 Score=105.43 Aligned_cols=93 Identities=27% Similarity=0.326 Sum_probs=73.9
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC-CCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 62000100000356530000011001113144556664203-6666621146665---3299864101389604689998
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g-~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
..-+||++....| +.++||||+||++|||++| +|+|.+....... ........++.+++++++||.+
T Consensus 179 ~y~aPE~~~~~~~---------~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~ 249 (285)
T d1fmka3 179 KWTAPEAALYGRF---------TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 249 (285)
T ss_dssp GGSCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHH
T ss_pred CCCCHHHHHCCCC---------CCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 5458089837998---------9177413235899999868999998888999999998268999983237999999999
Q ss_pred HHCCCCCCCCCCCCCCC--CCCCCCCCC
Q ss_conf 73023356887432224--787653333
Q 000399 791 CITKDWTRRPSAKSLLE--SPYFPSTVK 816 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~--hp~F~~~~~ 816 (1566)
||+.||++|||+.++++ ++||.....
T Consensus 250 cl~~dP~~Rps~~~i~~~L~~~~~~~~p 277 (285)
T d1fmka3 250 CWRKEPEERPTFEYLQAFLEDYFTSTEP 277 (285)
T ss_dssp HTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred HCCCCHHHCCCHHHHHHHHHHHHCCCCC
T ss_conf 7566975891999999987666238999
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.48 E-value=4.3e-15 Score=106.04 Aligned_cols=84 Identities=18% Similarity=0.235 Sum_probs=67.9
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 200010000035653000001100111314455666420-36666621146665---32998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
+-+||++....| +.++||||+||++|||++ |++||.+....+.. .....+..+...++.+.+||.+|
T Consensus 199 y~aPE~~~~~~~---------~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c 269 (299)
T d1jpaa_ 199 WTAPEAIQYRKF---------TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDC 269 (299)
T ss_dssp GSCHHHHHSCCC---------CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCCHHHHHCCCC---------CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 038788836997---------86121445357899998679999999999999999973788999742269999999997
Q ss_pred HCCCCCCCCCCCCCCCC
Q ss_conf 30233568874322247
Q 000399 792 ITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 792 L~~DP~~R~sa~elL~h 808 (1566)
|+.||++|||+.|+++.
T Consensus 270 l~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 270 WQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp TCSSTTTSCCHHHHHHH
T ss_pred CCCCHHHCCCHHHHHHH
T ss_conf 58797689299999999
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=7.2e-15 Score=104.66 Aligned_cols=85 Identities=16% Similarity=0.221 Sum_probs=68.2
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 6200010000035653000001100111314455666420-36666621146665---3299864101389604689998
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
.+-+||++....| +.++||||+||++|||++ |+|||.+.+..... .....+..+...++++.+|+.+
T Consensus 167 ~y~aPE~l~~~~~---------~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~ 237 (263)
T d1sm2a_ 167 KWASPEVFSFSRY---------SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNH 237 (263)
T ss_dssp TSCCHHHHTTCCC---------CHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred CCCCHHHHCCCCC---------CCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 6678578607999---------8403321059999999878988877899999999998068889954367999999999
Q ss_pred HHCCCCCCCCCCCCCCCC
Q ss_conf 730233568874322247
Q 000399 791 CITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~h 808 (1566)
||+.||++|||++|+++|
T Consensus 238 cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 238 CWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HCCCCHHHCCCHHHHHHH
T ss_conf 765797689199999999
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.46 E-value=3.9e-15 Score=106.28 Aligned_cols=85 Identities=22% Similarity=0.349 Sum_probs=65.2
Q ss_pred CCCCEEEEEHC---CCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH----HCC----CCCCCCCCCCCH
Q ss_conf 62000100000---3565300000110011131445566642036666621146665----329----986410138960
Q 000399 715 SMEYQELLLWR---QKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL----ENG----DLPGVMEELPSH 783 (1566)
Q Consensus 715 ~~g~PEvl~~~---~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~----~~~----~~~~~~~~~s~~ 783 (1566)
.+-+||++... .| +.++||||+||++|||++|++||.+....... ... .........+++
T Consensus 171 ~y~APE~l~~~~~~~~---------~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 241 (276)
T d1uwha_ 171 LWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241 (276)
T ss_dssp GGCCHHHHTTCSSCCC---------CHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHH
T ss_pred CCCCHHHHHCCCCCCC---------CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHH
T ss_conf 3179999950568999---------9531516359999999978899899896999999996588898600036555499
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 4689998730233568874322247
Q 000399 784 TRILVEACITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 784 ~~dlI~~lL~~DP~~R~sa~elL~h 808 (1566)
+++||.+||..||++|||+.|++++
T Consensus 242 l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 242 MKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 9999999758897689299999999
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.44 E-value=1.6e-14 Score=102.50 Aligned_cols=102 Identities=17% Similarity=0.197 Sum_probs=75.6
Q ss_pred CCCCHHHHHHHE---EE----CCCCCCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC-CCCCCCHHHHHHH
Q ss_conf 646767775311---33----257762000100000356530000011001113144556664203-6666621146665
Q 000399 697 SDIDLEYLLEHL---EV----EDEGSMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL 768 (1566)
Q Consensus 697 ~d~~~~s~~~~~---~~----~~~~~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g-~ppF~~~~~~~~~ 768 (1566)
+||+++...... .. .+....-+||++....| +.++||||+||++|||+++ .+||.+....+..
T Consensus 182 ~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~---------t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~ 252 (301)
T d1lufa_ 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY---------TTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVI 252 (301)
T ss_dssp CCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred CCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCC---------CHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 33144211367764111577776767679899726889---------805630252362999980689999998999999
Q ss_pred ---HCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf ---329986410138960468999873023356887432224
Q 000399 769 ---ENGDLPGVMEELPSHTRILVEACITKDWTRRPSAKSLLE 807 (1566)
Q Consensus 769 ---~~~~~~~~~~~~s~~~~dlI~~lL~~DP~~R~sa~elL~ 807 (1566)
.....+..+...++++.+||.+|++.||++|||+.|+++
T Consensus 253 ~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~ 294 (301)
T d1lufa_ 253 YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294 (301)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 999739978887325299999999974889657939999999
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.2e-14 Score=103.36 Aligned_cols=84 Identities=17% Similarity=0.223 Sum_probs=68.3
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 200010000035653000001100111314455666420-36666621146665---32998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
.-+||++....| +.++||||+||++|||++ |++||.+.+..+.. ........+...++++++||++|
T Consensus 167 y~aPE~~~~~~~---------~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c 237 (258)
T d1k2pa_ 167 WSPPEVLMYSKF---------SSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSC 237 (258)
T ss_dssp GCCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHT
T ss_pred CCCCHHHCCCCC---------CCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 578078637998---------85210336432467397559999889999999999980797899654659999999997
Q ss_pred HCCCCCCCCCCCCCCCC
Q ss_conf 30233568874322247
Q 000399 792 ITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 792 L~~DP~~R~sa~elL~h 808 (1566)
++.||++|||+.++++|
T Consensus 238 l~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 238 WHEKADERPTFKILLSN 254 (258)
T ss_dssp TCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHCCCHHHHHHH
T ss_conf 66897689399999987
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.43 E-value=1.5e-14 Score=102.61 Aligned_cols=83 Identities=20% Similarity=0.283 Sum_probs=68.3
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHH---HHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 200010000035653000001100111314455666420-3666662114666---532998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~---~~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
+-+||++....| +.++||||+||++|||++ |++||.+...... +.....+..+..+++++++||.+|
T Consensus 203 y~aPE~l~~~~y---------~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c 273 (299)
T d1fgka_ 203 WMAPEALFDRIY---------THQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDC 273 (299)
T ss_dssp GSCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHH
T ss_pred HHHHHHHCCCCC---------CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 632667517988---------82555477588888740179898999999999999972888898743529999999997
Q ss_pred HCCCCCCCCCCCCCCC
Q ss_conf 3023356887432224
Q 000399 792 ITKDWTRRPSAKSLLE 807 (1566)
Q Consensus 792 L~~DP~~R~sa~elL~ 807 (1566)
|++||.+|||+.|+++
T Consensus 274 l~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 274 WHAVPSQRPTFKQLVE 289 (299)
T ss_dssp TCSSGGGSCCHHHHHH
T ss_pred CCCCHHHCCCHHHHHH
T ss_conf 6679767939999999
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.43 E-value=1.3e-14 Score=103.15 Aligned_cols=83 Identities=23% Similarity=0.270 Sum_probs=66.2
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC-CCCCCCHHHHHH---HHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2000100000356530000011001113144556664203-666662114666---532998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVY---LENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g-~ppF~~~~~~~~---~~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
.-+||++....| +.++||||+||++|||+++ .|+|.+...... +.....+..+...++++++||.+|
T Consensus 182 y~aPE~~~~~~~---------~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c 252 (287)
T d1opja_ 182 WTAPESLAYNKF---------SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 252 (287)
T ss_dssp GCCHHHHHHCCC---------SHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCCHHHHCCCCC---------CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 669278727999---------81043021789999998679988774259999999855888888743309999999997
Q ss_pred HCCCCCCCCCCCCCCC
Q ss_conf 3023356887432224
Q 000399 792 ITKDWTRRPSAKSLLE 807 (1566)
Q Consensus 792 L~~DP~~R~sa~elL~ 807 (1566)
|+.||++|||+.|+++
T Consensus 253 l~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 253 WQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp TCSSGGGSCCHHHHHH
T ss_pred CCCCHHHCCCHHHHHH
T ss_conf 5779768939999999
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=1.8e-14 Score=102.24 Aligned_cols=83 Identities=18% Similarity=0.179 Sum_probs=67.3
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHHHHHH----CCCCCCCCCCCCCHHHHHHHH
Q ss_conf 200010000035653000001100111314455666420-366666211466653----299864101389604689998
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLAVYLE----NGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~~~~~----~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
.-+||++....| +.++||||+||++|||++ |++||.+.+..+... ....+..++.+|+++++||.+
T Consensus 180 ~~aPE~~~~~~~---------~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~ 250 (273)
T d1u46a_ 180 WCAPESLKTRTF---------SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQ 250 (273)
T ss_dssp GCCHHHHHHCEE---------EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCHHHHHCCCC---------CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 079999837999---------94215661489999999689999999699999999984799999854453999999999
Q ss_pred HHCCCCCCCCCCCCCCC
Q ss_conf 73023356887432224
Q 000399 791 CITKDWTRRPSAKSLLE 807 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~ 807 (1566)
|+..||++|||+.|+++
T Consensus 251 cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 251 CWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HTCSSGGGSCCHHHHHH
T ss_pred HCCCCHHHCCCHHHHHH
T ss_conf 76889667929999999
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.41 E-value=2e-14 Score=101.91 Aligned_cols=85 Identities=20% Similarity=0.149 Sum_probs=69.7
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC-CCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 62000100000356530000011001113144556664203-6666621146665---3299864101389604689998
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g-~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
..-+||++....| +.++||||+||++|||++| .+||.+.+..... .....+..+..+++++++||.+
T Consensus 191 ~y~aPE~l~~~~~---------~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~ 261 (309)
T d1fvra_ 191 RWMAIESLNYSVY---------TTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQ 261 (309)
T ss_dssp TTCCHHHHHHCEE---------CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHH
T ss_pred CCCCHHHHCCCCC---------CCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
T ss_conf 5555387526999---------9622153138899999836899999999999999998268888876678999999999
Q ss_pred HHCCCCCCCCCCCCCCCC
Q ss_conf 730233568874322247
Q 000399 791 CITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~h 808 (1566)
||+.||++|||+.|++++
T Consensus 262 cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 262 CWREKPYERPSFAQILVS 279 (309)
T ss_dssp HTCSSGGGSCCHHHHHHH
T ss_pred HCCCCHHHCCCHHHHHHH
T ss_conf 767896689499999999
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=2.4e-14 Score=101.44 Aligned_cols=89 Identities=21% Similarity=0.219 Sum_probs=70.6
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC-CCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2000100000356530000011001113144556664203-6666621146665---32998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR-RPLFDSISLAVYL---ENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g-~ppF~~~~~~~~~---~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
.-+||.+....| +.++||||+||+++||++| ++||.+.+..... .....+..++..++.+.++|.+|
T Consensus 201 y~aPe~l~~~~~---------~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~c 271 (308)
T d1p4oa_ 201 WMSPESLKDGVF---------TTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMC 271 (308)
T ss_dssp GCCHHHHHHCCC---------CHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCCHHHHCCCCC---------CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
T ss_conf 378888736998---------83334443789999999689999999899999999980888888633539999999997
Q ss_pred HCCCCCCCCCCCCCCC------CCCCCC
Q ss_conf 3023356887432224------787653
Q 000399 792 ITKDWTRRPSAKSLLE------SPYFPS 813 (1566)
Q Consensus 792 L~~DP~~R~sa~elL~------hp~F~~ 813 (1566)
++.||++|||+.|+++ +|+|.+
T Consensus 272 l~~~P~~RPs~~~il~~L~~~~~~~~~~ 299 (308)
T d1p4oa_ 272 WQYNPKMRPSFLEIISSIKEEMEPGFRE 299 (308)
T ss_dssp TCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred CCCCHHHCCCHHHHHHHHHHHCCCCCCC
T ss_conf 5779658939999999978761778757
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.38 E-value=4.8e-14 Score=99.53 Aligned_cols=84 Identities=25% Similarity=0.208 Sum_probs=65.5
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCC-HHH---HHHHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2000100000356530000011001113144556664203666662-114---666532998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDS-ISL---AVYLENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~-~~~---~~~~~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
.-+||++....| +.++||||+||++|||++|..||.. .+. ...+..+..+..++..++++.+||.+|
T Consensus 200 y~aPE~~~~~~~---------~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~c 270 (311)
T d1r0pa_ 200 WMALESLQTQKF---------TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 270 (311)
T ss_dssp GSCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHH
T ss_pred CCCHHHHHCCCC---------CCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 567688743799---------97457466199999999789999888999999999980898899644759999999997
Q ss_pred HCCCCCCCCCCCCCCCC
Q ss_conf 30233568874322247
Q 000399 792 ITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 792 L~~DP~~R~sa~elL~h 808 (1566)
++.||++|||+.|++++
T Consensus 271 l~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 271 WHPKAEMRPSFSELVSR 287 (311)
T ss_dssp TCSSGGGSCCHHHHHHH
T ss_pred CCCCHHHCCCHHHHHHH
T ss_conf 68897689399999999
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=7e-14 Score=98.50 Aligned_cols=83 Identities=18% Similarity=0.241 Sum_probs=65.6
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHC-CCCCCCCHHHH----HHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 200010000035653000001100111314455666420-36666621146----6653299864101389604689998
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHL-RRPLFDSISLA----VYLENGDLPGVMEELPSHTRILVEA 790 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~-g~ppF~~~~~~----~~~~~~~~~~~~~~~s~~~~dlI~~ 790 (1566)
+-+||++....| +.++||||+||++|||++ |.|+|.+.... ........+..+...++++++||.+
T Consensus 213 y~aPE~~~~~~~---------~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~ 283 (311)
T d1t46a_ 213 WMAPESIFNCVY---------TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKT 283 (311)
T ss_dssp GCCHHHHHHCCC---------CHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHH
T ss_pred HCCHHHHCCCCC---------CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 767788617999---------97400102589999998589988778998999999986689889854365999999999
Q ss_pred HHCCCCCCCCCCCCCCC
Q ss_conf 73023356887432224
Q 000399 791 CITKDWTRRPSAKSLLE 807 (1566)
Q Consensus 791 lL~~DP~~R~sa~elL~ 807 (1566)
||++||++|||+.|+++
T Consensus 284 cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 284 CWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HTCSSGGGSCCHHHHHH
T ss_pred HCCCCHHHCCCHHHHHH
T ss_conf 75779657929999999
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.36 E-value=2.2e-12 Score=89.17 Aligned_cols=254 Identities=12% Similarity=0.039 Sum_probs=159.7
Q ss_pred CCCCCCCCCCCCCCCC-----CCCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCC------CCCCCCE
Q ss_conf 2688878878863333-----467667787517533-201443213732021003760279960447------8853205
Q 000399 1288 FPTPAASWDGPDFLGR-----VGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIG------PGFKGTV 1355 (1566)
Q Consensus 1288 ~fSpdg~~~~~e~LaT-----gs~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~------~g~DgtV 1355 (1566)
+++|||.. ++. +..+.++.+||..++ .+.++..+ ....++|+||+++++.++.. .+.|+.|
T Consensus 8 a~spdg~~-----~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v 80 (355)
T d2bbkh_ 8 APAPDARR-----VYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGERTDYV 80 (355)
T ss_dssp CCCCCTTE-----EEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEE
T ss_pred EECCCCCE-----EEEEECCCCCCCCEEEEEECCCCCEEEEEECC--CCCCEEECCCCCEEEEEECCCCCCCCCCCCCEE
T ss_conf 65899999-----99982664777671999999999499999899--998569948999999996777642015899989
Q ss_pred EEEEECCCCCCCCCCCC-------CCCCCCEEEEECCCCEE--EC--CCCEEEEECCCCCEEEEEECCCCCC--------
Q ss_conf 66873000012444464-------11002148850688212--03--6727986268885799952245444--------
Q 000399 1356 QKWELTRINCVSGYYGH-------EEVVNDICVLSSSGRIA--SC--DGTLHVWNSQTGKLLSVFAEQSMDS-------- 1416 (1566)
Q Consensus 1356 rIWDl~s~~~i~~l~gH-------~~~V~sIafsp~~~~Lv--Sg--DgtI~IWD~~tg~~i~~l~~h~~~~-------- 1416 (1566)
++||+.+++.+..+..+ ......++|+++++.+. +. +..+.+||..+++.+..+..+....
T Consensus 81 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (355)
T d2bbkh_ 81 EVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDT 160 (355)
T ss_dssp EEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTE
T ss_pred EEEECCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCEEEECCCCC
T ss_conf 99999999798898058864031179873499933887157732798820454305788376677058740473069963
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEE-
Q ss_conf 4568998755644568788777-------76544353322346605778564300115787733761799983478325-
Q 000399 1417 LHGGSPSSSISKINTDQVGMLN-------SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL- 1488 (1566)
Q Consensus 1417 ~~~~~~~~~i~~~~~~~~~~~~-------~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l- 1488 (1566)
......++....+......... ...+...+...++.+. +..++.++.++.+++|+...++..
T Consensus 161 ~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~ 230 (355)
T d2bbkh_ 161 FFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK----------AGRLVWPTYTGKIHQIDLSSGDAKF 230 (355)
T ss_dssp EEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETT----------TTEEEEEBTTSEEEEEECTTSSCEE
T ss_pred EEEECCCCCEEEEEECCCCEEEEEECCCCCCEECCEEEECCCCCC----------CCEEEEECCCCEEEEEECCCCCEEE
T ss_conf 699938999899983478737999624333000110610215389----------9738874699829999658990799
Q ss_pred -EEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC----------CCCCEEEEEECCCCEEEEEECCCCEE
Q ss_conf -6631687666852468876215998544798544435787035----------87733677602585147740257604
Q 000399 1489 -HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL----------SSGQCRLFDVRSGNVIASWRAHDGYV 1557 (1566)
Q Consensus 1489 -~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs----------~Dg~I~iWD~rtg~~i~~l~~H~~~V 1557 (1566)
.....+ ......+.+.|.+. ....+++++..++..+ .++.|.+||..+++.+..+. +...+
T Consensus 231 ~~~~~~~------~~~~~~~~~~p~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~-~~~~~ 302 (355)
T d2bbkh_ 231 LPAVEAL------TEAERADGWRPGGW-QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEI 302 (355)
T ss_dssp CCCEESS------CHHHHHTTEEECSS-SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE-EEEEE
T ss_pred EECCCCC------CCCEEEEEEECCCE-EEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEEC-CCCCE
T ss_conf 8445784------41268543303510-8999807997678874068712651799759998678884989966-89987
Q ss_pred EEEEEECCC
Q ss_conf 676630159
Q 000399 1558 TKVRIISKR 1566 (1566)
Q Consensus 1558 t~lafsPdG 1566 (1566)
.+++|+|||
T Consensus 303 ~~~a~spDG 311 (355)
T d2bbkh_ 303 DSINVSQDE 311 (355)
T ss_dssp CEEEECCSS
T ss_pred EEEEECCCC
T ss_conf 799992899
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.36 E-value=8.4e-14 Score=98.02 Aligned_cols=83 Identities=18% Similarity=0.258 Sum_probs=65.3
Q ss_pred CCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC-CCCCCCHHHHH---HHHCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2000100000356530000011001113144556664203-66666211466---6532998641013896046899987
Q 000399 716 MEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLR-RPLFDSISLAV---YLENGDLPGVMEELPSHTRILVEAC 791 (1566)
Q Consensus 716 ~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g-~ppF~~~~~~~---~~~~~~~~~~~~~~s~~~~dlI~~l 791 (1566)
+-+||++....| +.++||||+||++|||+++ .|+|.+..... .+.....+..+...++.+++||.+|
T Consensus 179 Y~APE~l~~~~~---------~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~c 249 (283)
T d1mqba_ 179 WTAPEAISYRKF---------TSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQC 249 (283)
T ss_dssp GSCHHHHHSCCC---------CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHH
T ss_pred CCCHHHHCCCCC---------CCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 348888704999---------97355634489899999679886556899999999863578998504579999999997
Q ss_pred HCCCCCCCCCCCCCCC
Q ss_conf 3023356887432224
Q 000399 792 ITKDWTRRPSAKSLLE 807 (1566)
Q Consensus 792 L~~DP~~R~sa~elL~ 807 (1566)
+..||++|||+.|+++
T Consensus 250 l~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 250 WQQERARRPKFADIVS 265 (283)
T ss_dssp TCSSTTTSCCHHHHHH
T ss_pred CCCCHHHCCCHHHHHH
T ss_conf 7679768939999999
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.29 E-value=7.5e-14 Score=98.32 Aligned_cols=91 Identities=13% Similarity=0.182 Sum_probs=67.8
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHH----------HCCCCCCCCCCCCCHH
Q ss_conf 620001000003565300000110011131445566642036666621146665----------3299864101389604
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVYL----------ENGDLPGVMEELPSHT 784 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~~----------~~~~~~~~~~~~s~~~ 784 (1566)
.+-+||++....| ++++||||+||++|||++|++||.+....... .....+...+.+|+++
T Consensus 178 ~y~aPE~~~~~~~---------~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 248 (299)
T d1ckia_ 178 RYASINTHLGIEQ---------SRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEF 248 (299)
T ss_dssp SSCCHHHHTTBCC---------CHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHH
T ss_pred CCCCHHHHHCCCC---------CCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHH
T ss_conf 5329999918998---------9832188617789999849876655305779999998523567898357534788999
Q ss_pred HHHHHHHHCCCCCCCCCCC---CCCCCCCCCCC
Q ss_conf 6899987302335688743---22247876533
Q 000399 785 RILVEACITKDWTRRPSAK---SLLESPYFPST 814 (1566)
Q Consensus 785 ~dlI~~lL~~DP~~R~sa~---elL~hp~F~~~ 814 (1566)
.+||.+|+..||++||++. ++|+|+|....
T Consensus 249 ~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~ 281 (299)
T d1ckia_ 249 ATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 281 (299)
T ss_dssp HHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCC
T ss_conf 999999843995579199999999999999769
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.28 E-value=1.1e-11 Score=84.86 Aligned_cols=111 Identities=4% Similarity=-0.135 Sum_probs=77.7
Q ss_pred CCCCCCEEC--CCCCCCCCCCCCCCCCCC---------CCCCCCCEEEEEEEHHHHHCCCCCEEEEECCCCEEEEEECCC
Q ss_conf 348983022--688878878863333467---------667787517533201443213732021003760279960447
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGG---------LKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIG 1348 (1566)
Q Consensus 1280 ~~H~~wV~~--fSpdg~~~~~e~LaTgs~---------Dg~I~iWdi~~~~l~tl~gH~~~V~siafspdg~~lvSgS~~ 1348 (1566)
..|...|.+ |||||++ |+.++. ++.+.+||+.++.+..+..|.+.+..+.|+|||+.++...
T Consensus 58 ~~~~~~i~~~~~SpDg~~-----i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~-- 130 (470)
T d2bgra1 58 DEFGHSINDYSISPDGQF-----ILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-- 130 (470)
T ss_dssp TTSSSCCCEEEECTTSSE-----EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE--
T ss_pred HHCCCCCCEEEECCCCCE-----EEEEECCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE--
T ss_conf 431676540599898897-----9999777100010467349999898885131246874231010146764135751--
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCC------------------CCCCCCEEEEECCCCEEEC--C-CCEEEEEC
Q ss_conf 885320566873000012444464------------------1100214885068821203--6-72798626
Q 000399 1349 PGFKGTVQKWELTRINCVSGYYGH------------------EEVVNDICVLSSSGRIASC--D-GTLHVWNS 1400 (1566)
Q Consensus 1349 ~g~DgtVrIWDl~s~~~i~~l~gH------------------~~~V~sIafsp~~~~LvSg--D-gtI~IWD~ 1400 (1566)
|+.+.+|+..+++.......+ .+....+.|+|++++++.. | ..|..|++
T Consensus 131 ---~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~~ 200 (470)
T d2bgra1 131 ---NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEY 200 (470)
T ss_dssp ---TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEE
T ss_pred ---CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCCEEEECCCCCCEEEE
T ss_conf ---4641379889994653210147774053543201121004776530799998722026863776706998
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.27 E-value=9.3e-11 Score=79.13 Aligned_cols=259 Identities=6% Similarity=-0.082 Sum_probs=151.9
Q ss_pred CCCCCCCCCCCCCCCCC-----CCCCCCCCCEEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCCC------CCCCCE
Q ss_conf 26888788788633334-----67667787517533-2014432137320210037602799604478------853205
Q 000399 1288 FPTPAASWDGPDFLGRV-----GGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGP------GFKGTV 1355 (1566)
Q Consensus 1288 ~fSpdg~~~~~e~LaTg-----s~Dg~I~iWdi~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~~------g~DgtV 1355 (1566)
+++|+|+. ++.. +.++.+.+||..++ .+.++.++.. ..++|+||++++++++.+. ..|+.|
T Consensus 27 a~spdg~~-----~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~--~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v 99 (373)
T d2madh_ 27 APGADGRR-----SYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYV 99 (373)
T ss_pred CCCCCCCE-----EEEECCCCCCCCCEEEEEECCCCCEEEEEECCCC--CCEEECCCCCEEEEEEECCCCCCCCCCCEEE
T ss_conf 01899978-----9997342257876599998999979999957988--6079868999899996057753212453189
Q ss_pred EEEEECCCCCCCCCCCCCCCC-------CCEEEEECCCCEE--EC--CCCEEEEECCCCCEEEEEECCCC--------CC
Q ss_conf 668730000124444641100-------2148850688212--03--67279862688857999522454--------44
Q 000399 1356 QKWELTRINCVSGYYGHEEVV-------NDICVLSSSGRIA--SC--DGTLHVWNSQTGKLLSVFAEQSM--------DS 1416 (1566)
Q Consensus 1356 rIWDl~s~~~i~~l~gH~~~V-------~sIafsp~~~~Lv--Sg--DgtI~IWD~~tg~~i~~l~~h~~--------~~ 1416 (1566)
++||..+++.+..+..+.... ..+.|+++++.+. .. ++.+.+|+...++.......... ..
T Consensus 100 ~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~ 179 (373)
T d2madh_ 100 EVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPST 179 (373)
T ss_pred EEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCE
T ss_conf 99977789388897268851368516897089985899379999869874677623687289982452069996289919
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEE
Q ss_conf 456899875564456878877776-------5443533223466057785643001157877337617999834783256
Q 000399 1417 LHGGSPSSSISKINTDQVGMLNSN-------TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLH 1489 (1566)
Q Consensus 1417 ~~~~~~~~~i~~~~~~~~~~~~~~-------~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~ 1489 (1566)
+.....++.+.+++.......... ..........+++ +..++..+.++.+.+|+...+....
T Consensus 180 ~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~ 248 (373)
T d2madh_ 180 FYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANK-----------SGRIVWPVYSGKILQADISAAGATN 248 (373)
T ss_pred EEEECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEECC-----------CCEEEEECCCCEEEEEECCCCEEEE
T ss_conf 99994799399997477426678863003667530434588789-----------9429992589659999768990789
Q ss_pred E--ECCCCCCCC----CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEEEE
Q ss_conf 6--316876668----5246887621599854479854443578703587733677602585147740257604676630
Q 000399 1490 L--WRGEPTELG----FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1490 ~--l~~h~~~v~----~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafs 1563 (1566)
. +........ .......+++++++..... +...+..+++...++.+.+||..+++.+..+. +...+..++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~s 326 (373)
T d2madh_ 249 KAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYL-LTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVA 326 (373)
T ss_pred EEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEE-ECCCCCEEEEECCCCEEEEEECCCCCEEEEEC-CCCCEEEEEEC
T ss_conf 77630564757866413674133577149975999-54888247862589869999899996989866-89982589999
Q ss_pred CCC
Q ss_conf 159
Q 000399 1564 SKR 1566 (1566)
Q Consensus 1564 PdG 1566 (1566)
|||
T Consensus 327 pDG 329 (373)
T d2madh_ 327 QDG 329 (373)
T ss_pred CCC
T ss_conf 899
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.23 E-value=8.3e-12 Score=85.64 Aligned_cols=48 Identities=6% Similarity=-0.188 Sum_probs=18.5
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCE-EEC--CCCEEEEECC
Q ss_conf 205668730000124444641100214885068821-203--6727986268
Q 000399 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQ 1401 (1566)
Q Consensus 1353 gtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~L-vSg--DgtI~IWD~~ 1401 (1566)
+.+.+|+....+.+..+...+ ....+.++|+++++ +++ |++|.+||+.
T Consensus 238 ~v~vvd~~~~~~v~~~IPvgk-sPhGv~vSPDGkyl~~~~~~~~tvsv~d~~ 288 (441)
T d1qnia2 238 KVPVVDGRGESEFTRYIPVPK-NPHGLNTSPDGKYFIANGKLSPTVSVIAID 288 (441)
T ss_dssp CCCEEECSSSCSSEEEECCBS-SCCCEEECTTSCEEEEECTTSSBEEEEEGG
T ss_pred CCEEEECCCCCCEEEEEECCC-CCCCCEECCCCCEEEEECCCCCCEEEEEEE
T ss_conf 828998036870689971798-866726899987899907759938999832
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.18 E-value=1.7e-10 Score=77.46 Aligned_cols=256 Identities=9% Similarity=-0.100 Sum_probs=146.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC--EEEEE-EEHHHHHCCCCCEEEEECCCCEEEEEECCC------CCCCCCEEEEE
Q ss_conf 6888788788633334676677875--17533-201443213732021003760279960447------88532056687
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPW--KIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIG------PGFKGTVQKWE 1359 (1566)
Q Consensus 1289 fSpdg~~~~~e~LaTgs~Dg~I~iW--di~~~-~l~tl~gH~~~V~siafspdg~~lvSgS~~------~g~DgtVrIWD 1359 (1566)
++++|.. .-+..+...+++..+| |..+. .+.++.++.. ..++|+||++.++.++.. .++|++|++||
T Consensus 27 ~~~~~~~--~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~--~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D 102 (368)
T d1mdah_ 27 PGAISRR--SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL--SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFD 102 (368)
T ss_dssp CCCCTTE--EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT--CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEEC
T ss_pred CCCCCCC--EEEEEECCCCCCCEEEEEECCCCCEEEEEECCCC--CCCEECCCCCEEEEECCCCCCCCCCCCCCEEEEEE
T ss_conf 5898761--2697204578862179970899837788857877--75139899988999755676401035678699998
Q ss_pred ECCCCCCCCCCCCC-------CCCCCEEEEECCCCEEEC---CCCEEEEECCCCCEEEEEECCCCC--------CCCCCC
Q ss_conf 30000124444641-------100214885068821203---672798626888579995224544--------445689
Q 000399 1360 LTRINCVSGYYGHE-------EVVNDICVLSSSGRIASC---DGTLHVWNSQTGKLLSVFAEQSMD--------SLHGGS 1421 (1566)
Q Consensus 1360 l~s~~~i~~l~gH~-------~~V~sIafsp~~~~LvSg---DgtI~IWD~~tg~~i~~l~~h~~~--------~~~~~~ 1421 (1566)
..+++++..+..+. .....++|++++++++.+ ++.+.+||+.+++....+..+... ......
T Consensus 103 ~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 182 (368)
T d1mdah_ 103 PVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGS 182 (368)
T ss_dssp TTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCC
T ss_pred CCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEECCCCCCEEEEEC
T ss_conf 99993830643785421024688640588789989999968998599998998938678604675237469982399994
Q ss_pred CCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCC
Q ss_conf 98755644568788777-------76544353322346605778564300115787733761799983478325663168
Q 000399 1422 PSSSISKINTDQVGMLN-------SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1494 (1566)
Q Consensus 1422 ~~~~i~~~~~~~~~~~~-------~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h 1494 (1566)
.++.+..+......... .......+....+.++ +..+.+ .++.+.+++...+.........
T Consensus 183 ~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~--~~~~v~~~~~~~~~~~~~~~~~ 250 (368)
T d1mdah_ 183 CPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP----------GMLVWA--VASSILQGDIPAAGATMKAAID 250 (368)
T ss_dssp CTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTT----------TEEEEC--BSSCCEEEECCSSCCEEECCCC
T ss_pred CCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCC----------CEEEEE--CCCCEEEEEECCCCEEEEEECC
T ss_conf 8998899982689626665303111356664660101558----------689993--4897799960699369976024
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHC---------CCCCCEEEEEECCCCEEEEEECCCCEEEEEEEECC
Q ss_conf 766685246887621599854479854443578703---------58773367760258514774025760467663015
Q 000399 1495 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAG---------LSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1495 ~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSG---------s~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPd 1565 (1566)
. .........+.+.+. ....+++++..++.. .....|.+||..+++.+..+. +...+..++|+||
T Consensus 251 ~----~~~~~~~~~~~~~g~-~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~-~~~~~~~~a~spD 324 (368)
T d1mdah_ 251 G----NESGRKADNFRSAGF-QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS-NGHDSDAIIAAQD 324 (368)
T ss_dssp S----SCTHHHHTTEEECSS-SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE-EEEEECEEEECCS
T ss_pred C----CCCEEEEEEECCCCC-EEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEEC-CCCCEEEEEECCC
T ss_conf 6----543045540127883-568871799879998358973340588649999899994868955-8996517999989
Q ss_pred C
Q ss_conf 9
Q 000399 1566 R 1566 (1566)
Q Consensus 1566 G 1566 (1566)
|
T Consensus 325 G 325 (368)
T d1mdah_ 325 G 325 (368)
T ss_dssp S
T ss_pred C
T ss_conf 9
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=7.5e-12 Score=85.91 Aligned_cols=91 Identities=14% Similarity=0.074 Sum_probs=57.4
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHH---------------H---HHH-CCCCCC
Q ss_conf 620001000003565300000110011131445566642036666621146---------------6---653-299864
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLA---------------V---YLE-NGDLPG 775 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~---------------~---~~~-~~~~~~ 775 (1566)
.+-+||++..... .....++.++||||+||++|||++|.+||...... . ... ....+.
T Consensus 177 ~y~aPE~~~~~~~---~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 253 (303)
T d1vjya_ 177 RYMAPEVLDDSIN---MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN 253 (303)
T ss_dssp GGCCHHHHTTCSC---TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCC
T ss_pred CCCCHHHCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 7678221056545---4677767501220159999999628998876631124101225564309999998750246888
Q ss_pred CCCC-----CCCHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 1013-----89604689998730233568874322247
Q 000399 776 VMEE-----LPSHTRILVEACITKDWTRRPSAKSLLES 808 (1566)
Q Consensus 776 ~~~~-----~s~~~~dlI~~lL~~DP~~R~sa~elL~h 808 (1566)
.+.. ....+.+|+.+||+.||++|||+.|++++
T Consensus 254 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 254 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp CCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 77655776899999999999760698589599999999
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.04 E-value=1.3e-10 Score=78.14 Aligned_cols=70 Identities=13% Similarity=-0.089 Sum_probs=44.5
Q ss_pred CCCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE-EHHH------------------HHCCCCCEEEEECCCC
Q ss_conf 48983022--6888788788633334676677875175332-0144------------------3213732021003760
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASI-LSSI------------------RAHHGALRSVAVGQDE 1339 (1566)
Q Consensus 1281 ~H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~-l~tl------------------~gH~~~V~siafspdg 1339 (1566)
.+.+++.. |||||++ ++.. .|+.+.+|+..++. .+.. ....+....+.|+|||
T Consensus 109 ~~~~~~~~~~~SPDG~~-----ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDG 182 (470)
T d2bgra1 109 RIPNNTQWVTWSPVGHK-----LAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG 182 (470)
T ss_dssp CCCTTEEEEEECSSTTC-----EEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS
T ss_pred CCCCCCCCCCCCCCCCE-----EEEE-ECCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEECCCC
T ss_conf 68742310101467641-----3575-14641379889994653210147774053543201121004776530799998
Q ss_pred EEEEEECCCCCCCCC-EEEEEE
Q ss_conf 279960447885320-566873
Q 000399 1340 CTVFTAGIGPGFKGT-VQKWEL 1360 (1566)
Q Consensus 1340 ~~lvSgS~~~g~Dgt-VrIWDl 1360 (1566)
+.++.... |.+ |..|++
T Consensus 183 k~ia~~~~----d~~~v~~~~~ 200 (470)
T d2bgra1 183 TFLAYAQF----NDTEVPLIEY 200 (470)
T ss_dssp SEEEEEEE----ECTTCCEEEE
T ss_pred CCCCEEEE----CCCCCCEEEE
T ss_conf 72202686----3776706998
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.02 E-value=1.8e-11 Score=83.60 Aligned_cols=83 Identities=11% Similarity=0.109 Sum_probs=62.5
Q ss_pred CCCCEEEEEHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHH------H----HCCCCCCCCCCCCCHH
Q ss_conf 62000100000356530000011001113144556664203666662114666------5----3299864101389604
Q 000399 715 SMEYQELLLWRQKSSYSKTFSKDCSKDIFSIGCLLAELHLRRPLFDSISLAVY------L----ENGDLPGVMEELPSHT 784 (1566)
Q Consensus 715 ~~g~PEvl~~~~y~~~~~~l~~~~~~DiWSlGcil~EL~~g~ppF~~~~~~~~------~----~~~~~~~~~~~~s~~~ 784 (1566)
.+-+||++..+.| +.++||||+||++|||++|++||.+...... + .......+.+.+|+++
T Consensus 178 ~y~aPE~~~~~~~---------~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l 248 (293)
T d1csna_ 178 RYMSINTHLGREQ---------SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEF 248 (293)
T ss_dssp TTCCHHHHTTCCC---------CHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHH
T ss_pred HHCCHHHHCCCCC---------CHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHH
T ss_conf 0267989648888---------8699989831999999869876788530219999999970567999589657998999
Q ss_pred HHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 6899987302335688743222
Q 000399 785 RILVEACITKDWTRRPSAKSLL 806 (1566)
Q Consensus 785 ~dlI~~lL~~DP~~R~sa~elL 806 (1566)
.+++..|+..+|++||+.+.+.
T Consensus 249 ~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 249 YKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp HHHHHHHHHCCTTCCCCHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHHHHH
T ss_conf 9999998439930085999999
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.73 E-value=5.8e-07 Score=55.59 Aligned_cols=201 Identities=9% Similarity=0.061 Sum_probs=102.8
Q ss_pred CCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCC---CCC--CCCCCCCCCEEEEECCCCE-EEC--CCCEEEEE
Q ss_conf 732021003760279960447885320566873000012---444--4641100214885068821-203--67279862
Q 000399 1328 GALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV---SGY--YGHEEVVNDICVLSSSGRI-ASC--DGTLHVWN 1399 (1566)
Q Consensus 1328 ~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i---~~l--~gH~~~V~sIafsp~~~~L-vSg--DgtI~IWD 1399 (1566)
..+.+++|+||++++++++.+ ...|.+|+......+ ... .........++|+|+++++ +++ +++|.+||
T Consensus 145 ~h~h~v~~sPdG~~l~v~d~g---~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~ 221 (365)
T d1jofa_ 145 TGIHGMVFDPTETYLYSADLT---ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETT---TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCEEEEECCCCCEEEEEECC---CCEEEEEECCCCCCEEECCCEEECCCCCCEEEEEECCCCCEEEEECCCCCEEEEEE
T ss_conf 811597888999989982079---98799997068871665251111278874089998899866999515899899999
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEC-CC---
Q ss_conf 68885799952245444456899875564456878877776544353322346605778564300115787733-76---
Q 000399 1400 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG-NG--- 1475 (1566)
Q Consensus 1400 ~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~-Dg--- 1475 (1566)
...++.................. ...............+.++|+ |++++++.. +.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~spd----------G~~lyvsnr~~~~~~ 280 (365)
T d1jofa_ 222 IDPATHMPVYTHHSFPLIPPGIP-----------DRDPETGKGLYRADVCALTFS----------GKYMFASSRANKFEL 280 (365)
T ss_dssp ECTTTCCEEEEEEEEESSCTTCC-----------CBCTTTSSBSEEEEEEEECTT----------SSEEEEEEEESSTTS
T ss_pred ECCCCCEEEEEEEEECCCCCCCC-----------CCCCCCCCCCCCCCCEEECCC----------CCEEEEECCCCCCCC
T ss_conf 55987537787312402455655-----------666544443577631699899----------997899713578754
Q ss_pred --EEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHH-HCCCCCCEEEEEECCCC--EEEEE
Q ss_conf --17999834783256631687666852468876215998544798544435787-03587733677602585--14774
Q 000399 1476 --SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIA-AGLSSGQCRLFDVRSGN--VIASW 1550 (1566)
Q Consensus 1476 --tIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~La-SGs~Dg~I~iWD~rtg~--~i~~l 1550 (1566)
.|..|++.....+..............+.+.++++|. +|++++ ++..++.|.+|+.+... .+...
T Consensus 281 ~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~----------~G~~l~va~~~s~~v~v~~~~~~~l~~~~~~ 350 (365)
T d1jofa_ 281 QGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPW----------SDEWMAITDDQEGWLEIYRWKDEFLHRVARV 350 (365)
T ss_dssp CCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTT----------CTTEEEEECSSSCEEEEEEEETTEEEEEEEE
T ss_pred CEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCC----------CCCEEEEEECCCCEEEEEEEECCCCCEEEEE
T ss_conf 227999985688714467676677767998647896489----------9999999967999499999828867278999
Q ss_pred EC-CCCEEEEEEE
Q ss_conf 02-5760467663
Q 000399 1551 RA-HDGYVTKVRI 1562 (1566)
Q Consensus 1551 ~~-H~~~Vt~laf 1562 (1566)
+- -.....++.|
T Consensus 351 ~vp~p~~~~~~~w 363 (365)
T d1jofa_ 351 RIPEPGFGMNAIW 363 (365)
T ss_dssp ECCSTTEEEEEEE
T ss_pred ECCCCCCCEEEEE
T ss_conf 8899999768796
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.59 E-value=1.1e-09 Score=72.51 Aligned_cols=262 Identities=6% Similarity=-0.056 Sum_probs=129.5
Q ss_pred CCCCCEEC--CCCCCCCCCCCCC-CCCCCCCCCCCCEEEEE-EEHHHH-HCCCCCEEEEECCCCE--EEEEECCCCC---
Q ss_conf 48983022--6888788788633-33467667787517533-201443-2137320210037602--7996044788---
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFL-GRVGGLKDESPWKIKAS-ILSSIR-AHHGALRSVAVGQDEC--TVFTAGIGPG--- 1350 (1566)
Q Consensus 1281 ~H~~wV~~--fSpdg~~~~~e~L-aTgs~Dg~I~iWdi~~~-~l~tl~-gH~~~V~siafspdg~--~lvSgS~~~g--- 1350 (1566)
.|-+.... ++|||+| | ++...+++|.++|+.+. +...+. .+......++|+++++ +++..+.+..
T Consensus 69 ~hhP~~s~t~gtpDGr~-----lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~ 143 (441)
T d1qnia2 69 CHHPHISMTDGRYDGKY-----LFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQP 143 (441)
T ss_dssp BCCCEEEEETTEEEEEE-----EEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESS
T ss_pred CCCCCCCEECCCCCCCE-----EEEECCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCC
T ss_conf 56777221032688888-----9997389997999988778475579567887864348705699899995667754436
Q ss_pred -------CC---CCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCE-EEC--CCCEEEEECCCCCEEEEEECCCCCC-
Q ss_conf -------53---205668730000124444641100214885068821-203--6727986268885799952245444-
Q 000399 1351 -------FK---GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDS- 1416 (1566)
Q Consensus 1351 -------~D---gtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~L-vSg--DgtI~IWD~~tg~~i~~l~~h~~~~- 1416 (1566)
.+ ..+..+|..+.+...++... +....++|+++++++ +++ ...+..+|..+.+....+.......
T Consensus 144 ~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~ 222 (441)
T d1qnia2 144 NDGTDFSLDNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERI 222 (441)
T ss_dssp CSSSCCCGGGEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHH
T ss_pred CCCCCCCCCCCCCEEEEECCCCCEEEEEEECC-CCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCE
T ss_conf 76630014555323886637556064787369-98654698799998999851787318985157121789996885110
Q ss_pred --------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEE-EEEECCCEEEEEECCCCCE
Q ss_conf --------4568998755644568788777765443533223466057785643001157-8773376179998347832
Q 000399 1417 --------LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERL-VVGIGNGSLRFIDINQGQK 1487 (1566)
Q Consensus 1417 --------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~L-vsgs~DgtIriWDi~sg~~ 1487 (1566)
......++...++...................+.++|+ |+++ +++..|++|.+||+.+...
T Consensus 223 ~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPD----------Gkyl~~~~~~~~tvsv~d~~k~~~ 292 (441)
T d1qnia2 223 AAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPD----------GKYFIANGKLSPTVSVIAIDKLDD 292 (441)
T ss_dssp HHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTT----------SCEEEEECTTSSBEEEEEGGGHHH
T ss_pred EEEECCCCEEEECCCCCEEEECCCCCCEEEEEECCCCCCCCEECCC----------CCEEEEECCCCCCEEEEEEEHHHH
T ss_conf 7996699999969998289980368706899717988667268999----------878999077599389998322445
Q ss_pred EEEECCCCCCCCCHHHHHHHHCCCCCCC--CCCCCCCCHHHHHHCCCCCCEEEEEECC----------CCEEEEE-----
Q ss_conf 5663168766685246887621599854--4798544435787035877336776025----------8514774-----
Q 000399 1488 LHLWRGEPTELGFPSLVSAICACGSEKM--QAGGAVASPSWIAAGLSSGQCRLFDVRS----------GNVIASW----- 1550 (1566)
Q Consensus 1488 l~~l~~h~~~v~~~~~V~sVa~sps~~~--~~~~~spdG~~LaSGs~Dg~I~iWD~rt----------g~~i~~l----- 1550 (1566)
+ +.+. ..+..++...+.... ....|+++|..+.+.+.|..|..|++.. ...+..+
T Consensus 293 ~--~~~~------~~~~~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~ 364 (441)
T d1qnia2 293 L--FEDK------IELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQ 364 (441)
T ss_dssp H--TTTS------SCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSC
T ss_pred H--HHCC------CCCCEEEEEECCCCCCCCCCEECCCCEEEECCCCCCEEEEECCCHHHHHHCCCCCCEEEECCCCCCC
T ss_conf 7--5256------8842479960145547665226578559985244316897235422133226777656864532668
Q ss_pred ECCCCEEEEEEEECCC
Q ss_conf 0257604676630159
Q 000399 1551 RAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1551 ~~H~~~Vt~lafsPdG 1566 (1566)
.||...+.+.+++|||
T Consensus 365 ~GH~~~~~~~t~~pdG 380 (441)
T d1qnia2 365 PGHNHASLTESRDADG 380 (441)
T ss_dssp EEEEEETTTTSTTCCC
T ss_pred CCCCCCCCCCCCCCCC
T ss_conf 9877524542238988
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.57 E-value=5.7e-07 Score=55.62 Aligned_cols=114 Identities=10% Similarity=0.028 Sum_probs=77.3
Q ss_pred CEE--CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECC
Q ss_conf 302--268887887886333346766778751753320144321373202100376027996044788532056687300
Q 000399 1285 WFW--FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1362 (1566)
Q Consensus 1285 wV~--~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s 1362 (1566)
|+. +++|||.+ +++...+++|..|+..+. ...+....+.+.+++|.++++.+++... ++.+..|+...
T Consensus 29 ~~e~iAv~pdG~l-----~vt~~~~~~I~~i~p~g~-~~~~~~~~~~~~gla~~~dG~l~v~~~~----~~~~~~~~~~~ 98 (302)
T d2p4oa1 29 FLENLASAPDGTI-----FVTNHEVGEIVSITPDGN-QQIHATVEGKVSGLAFTSNGDLVATGWN----ADSIPVVSLVK 98 (302)
T ss_dssp CEEEEEECTTSCE-----EEEETTTTEEEEECTTCC-EEEEEECSSEEEEEEECTTSCEEEEEEC----TTSCEEEEEEC
T ss_pred CCCCEEECCCCCE-----EEEECCCCEEEEEECCCC-EEEEECCCCCCCEEEECCCCCEEEEECC----CCEEEEEEECC
T ss_conf 8478779999889-----999688998999908998-8999717998536898677886998328----95378887101
Q ss_pred CCCC-CCC--CCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEE
Q ss_conf 0012-444--4641100214885068821203--67279862688857999
Q 000399 1363 INCV-SGY--YGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSV 1408 (1566)
Q Consensus 1363 ~~~i-~~l--~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~ 1408 (1566)
.... ..+ .......+.+++.++++.+++. ++.+..+|...+.....
T Consensus 99 ~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~ 149 (302)
T d2p4oa1 99 SDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIW 149 (302)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCEEECCCCCCCCCCCEEEECCCCCEEEECCCCCCCEEEECCCCCCEEE
T ss_conf 111012102357863221667715797875035655410242168730367
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=2.4e-06 Score=51.77 Aligned_cols=91 Identities=13% Similarity=0.018 Sum_probs=51.4
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEEEECCC---EEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 5332234660577856430011578773376---1799983478325663168766685246887621599854479854
Q 000399 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNG---SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAV 1521 (1566)
Q Consensus 1445 ~V~siafsp~~~t~l~~s~dg~~Lvsgs~Dg---tIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~s 1521 (1566)
......|+|+ ++.++..+.++ .+.+.|...+.. ....... ..... .++
T Consensus 172 ~~~~~~~spd----------g~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~------~~~~p-----------~~S 222 (269)
T d2hqsa1 172 QNQDADVSSD----------GKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF------LDETP-----------SLA 222 (269)
T ss_dssp EEEEEEECTT----------SSEEEEEEECSSCEEEEEEETTTCCE--EECCCSS------SCEEE-----------EEC
T ss_pred CCCCCCCCCC----------CCEEEEEEECCCCEEEEEEECCCCCC--EEEECCC------CCCCE-----------EEC
T ss_conf 2234322345----------43057786058801256760356440--5850686------54455-----------898
Q ss_pred CCHHHHHHCC---CCCCEEEEEECCCCEEEEEECCCCEEEEEEEECC
Q ss_conf 4435787035---8773367760258514774025760467663015
Q 000399 1522 ASPSWIAAGL---SSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1522 pdG~~LaSGs---~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPd 1565 (1566)
|||++|+-.+ ....++++++..+.. ..+....+.+...+|||-
T Consensus 223 PDG~~i~f~s~~~~~~~l~~~~~dg~~~-~~lt~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 223 PNGTMVIYSSSQGMGSVLNLVSTDGRFK-ARLPATDGQVKFPAWSPY 268 (269)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTSCCE-EECCCSSSEEEEEEECCC
T ss_pred CCCCEEEEEECCCCCCEEEEEECCCCCE-EEEECCCCCEEEEEECCC
T ss_conf 9999999998179984799999999977-998579985883782898
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.31 E-value=6.7e-06 Score=49.01 Aligned_cols=39 Identities=5% Similarity=0.037 Sum_probs=27.3
Q ss_pred CCCCCCCCCHHHHH---HCCCCCCEEEEEECCCCEEEEEECC
Q ss_conf 44798544435787---0358773367760258514774025
Q 000399 1515 MQAGGAVASPSWIA---AGLSSGQCRLFDVRSGNVIASWRAH 1553 (1566)
Q Consensus 1515 ~~~~~~spdG~~La---SGs~Dg~I~iWD~rtg~~i~~l~~H 1553 (1566)
+....|||+|++++ +|..--.+.+++..+++.+..+...
T Consensus 412 ~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~Le~N 453 (465)
T d1xfda1 412 YFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLETN 453 (465)
T ss_dssp CCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEEECC
T ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCC
T ss_conf 799999999999999800699984999999999799997387
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.29 E-value=1.2e-05 Score=47.52 Aligned_cols=159 Identities=14% Similarity=0.114 Sum_probs=70.2
Q ss_pred CCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCC--CCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCC
Q ss_conf 3732021003760279960447885320566873000012444--4641100214885068821203--67279862688
Q 000399 1327 HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGY--YGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQT 1402 (1566)
Q Consensus 1327 ~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~l--~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~t 1402 (1566)
......+++.+++..+++... .+.+.+++.. ++.+.++ ..+-.....+++.+++..+++. .+.|++||..
T Consensus 113 ~~~p~~~avd~~G~i~v~~~~----~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~- 186 (279)
T d1q7fa_ 113 LQHPRGVTVDNKGRIIVVECK----VMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE- 186 (279)
T ss_dssp CSCEEEEEECTTSCEEEEETT----TTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-
T ss_pred CCCCCEECCCCCCCEEEEEEC----CCEEEEECCC-CCEEECCCCCCCCCCCCEEEECCCEEEEEEECCCCCEEEEECC-
T ss_conf 425420000147847999632----6325676268-7501002200102566243201200178620135510023047-
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEC-CCEEEEEE
Q ss_conf 85799952245444456899875564456878877776544353322346605778564300115787733-76179998
Q 000399 1403 GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIG-NGSLRFID 1481 (1566)
Q Consensus 1403 g~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~-DgtIriWD 1481 (1566)
|+.+..+.... .......++++++ |+++++-+. ++.|.+++
T Consensus 187 G~~~~~~g~~g----------------------------~~~~P~giavD~~----------G~i~Vad~~~~~~v~~f~ 228 (279)
T d1q7fa_ 187 GQYLRQIGGEG----------------------------ITNYPIGVGINSN----------GEILIADNHNNFNLTIFT 228 (279)
T ss_dssp CCEEEEESCTT----------------------------TSCSEEEEEECTT----------CCEEEEECSSSCEEEEEC
T ss_pred CCEEEEECCCC----------------------------CCCCCCCCCCCCC----------CEEEEEECCCCCEEEEEC
T ss_conf 94445301132----------------------------1148762323147----------869999789980899999
Q ss_pred CCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCE
Q ss_conf 34783256631687666852468876215998544798544435787035877336776025851
Q 000399 1482 INQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV 1546 (1566)
Q Consensus 1482 i~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~ 1546 (1566)
. +|+.+..+...... .....|++ .++|.++ +++.++.|++|......+
T Consensus 229 ~-~G~~~~~~~~~~~~----~~p~~vav-----------~~dG~l~-V~~~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 229 Q-DGQLISALESKVKH----AQCFDVAL-----------MDDGSVV-LASKDYRLYIYRYVQLAP 276 (279)
T ss_dssp T-TSCEEEEEEESSCC----SCEEEEEE-----------ETTTEEE-EEETTTEEEEEECSCCCC
T ss_pred C-CCCEEEEEECCCCC----CCEEEEEE-----------ECCCCEE-EEECCCEEEEEEEEEECC
T ss_conf 9-99999999688888----98837999-----------0899199-991899699987220357
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.20 E-value=7.3e-06 Score=48.75 Aligned_cols=201 Identities=12% Similarity=-0.008 Sum_probs=90.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHH----HC-CCCCEEEEECCCCEEEEEECCCC---------CCCC
Q ss_conf 2688878878863333467667787517533201443----21-37320210037602799604478---------8532
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIR----AH-HGALRSVAVGQDECTVFTAGIGP---------GFKG 1353 (1566)
Q Consensus 1288 ~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~l~tl~----gH-~~~V~siafspdg~~lvSgS~~~---------g~Dg 1353 (1566)
.|.++|.. +..++....+...+..+.....+. +. -...+++++.++|...+|-+... ....
T Consensus 77 ~~~~dg~~-----l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~ 151 (314)
T d1pjxa_ 77 QCDRDANQ-----LFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEK 151 (314)
T ss_dssp EECSSSSE-----EEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSS
T ss_pred EEECCCCE-----EEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCEECCC
T ss_conf 99079998-----9999779839999477747999733432454578727898889989991486675432011000268
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCCEEEEECCC----CE-EE--CCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 056687300001244446411002148850688----21-20--367279862688857999522454444568998755
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSG----RI-AS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1426 (1566)
Q Consensus 1354 tVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~----~L-vS--gDgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i 1426 (1566)
.-++|.+........+...-..-+.++|++++. .+ ++ ..+.|..||+.....+........ ...
T Consensus 152 ~G~v~~~~~dg~~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~---~~~------ 222 (314)
T d1pjxa_ 152 FGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH---IPG------ 222 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE---CCC------
T ss_pred CCEEEEEEECCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEE---CCC------
T ss_conf 84389995257403750785322136997887763037999860243117761167654301568997---133------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf 64456878877776544353322346605778564300115787733761799983478325663168766685246887
Q 000399 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1566)
Q Consensus 1427 ~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~s 1506 (1566)
......-.++++.+ |++.++....+.|..||...++.+..+.... ...++
T Consensus 223 --------------~~~~~pdGiavD~~----------GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~------~~~t~ 272 (314)
T d1pjxa_ 223 --------------THEGGADGMDFDED----------NNLLVANWGSSHIEVFGPDGGQPKMRIRCPF------EKPSN 272 (314)
T ss_dssp --------------CSSCEEEEEEEBTT----------CCEEEEEETTTEEEEECTTCBSCSEEEECSS------SCEEE
T ss_pred --------------CCCCCCEEEEEECC----------CCEEEEECCCCEEEEEECCCCEEEEEEECCC------CCEEE
T ss_conf --------------56664102578347----------8579998279999999699997999997999------98789
Q ss_pred HHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEC
Q ss_conf 621599854479854443578703587733677602
Q 000399 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1507 Va~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~r 1542 (1566)
+||.|+.. .+.++.+.+|.|...++.
T Consensus 273 ~afg~d~~----------~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 273 LHFKPQTK----------TIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEECTTSS----------EEEEEETTTTEEEEEECS
T ss_pred EEEECCCC----------EEEEEECCCCCEEEEECC
T ss_conf 99928989----------999998789919999789
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.19 E-value=9.4e-06 Score=48.09 Aligned_cols=47 Identities=11% Similarity=-0.039 Sum_probs=23.4
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf 115787733761799983478325663168766685246887621599
Q 000399 1465 VERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1566)
Q Consensus 1465 g~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps 1512 (1566)
|++.++...++.|..+|. .++.+.++.......++...+.++++.+.
T Consensus 239 G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~ 285 (319)
T d2dg1a1 239 DNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPG 285 (319)
T ss_dssp CCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred CCEEEEECCCCEEEEECC-CCCEEEEEECCCCCCCCCCEEEEEEEECC
T ss_conf 999999848998999979-99598899688757786750466778079
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.15 E-value=2e-05 Score=46.07 Aligned_cols=71 Identities=8% Similarity=-0.020 Sum_probs=28.3
Q ss_pred CCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECCC
Q ss_conf 7320210037602799604478853205668730000124444641100214885068821203--67279862688
Q 000399 1328 GALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQT 1402 (1566)
Q Consensus 1328 ~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~t 1402 (1566)
....++++.++++++++-.. ...+..++..................++++.++++.+++. ++.|..+|...
T Consensus 98 ~~p~~iavd~~g~i~v~d~~----~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~ 170 (260)
T d1rwia_ 98 NYPEGLAVDTQGAVYVADRG----NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 170 (260)
T ss_dssp CSEEEEEECTTCCEEEEEGG----GTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred EECCCCCCCCCCEEEEECCC----CCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCEEEECCCCCCCCCCCCCC
T ss_conf 00000024553205750335----55321123222201223203667752054548998864102564332223431
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=97.97 E-value=2.7e-05 Score=45.19 Aligned_cols=176 Identities=9% Similarity=-0.104 Sum_probs=90.0
Q ss_pred CCCCEEC--CCCCCCCCCCCCCCCCCCCCCCCCCEEEEE--EEHHHH--HCCCCCEEEEECCCCEEEEEECCCCCCCCCE
Q ss_conf 8983022--688878878863333467667787517533--201443--2137320210037602799604478853205
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS--ILSSIR--AHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1282 H~~wV~~--fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~--~l~tl~--gH~~~V~siafspdg~~lvSgS~~~g~DgtV 1355 (1566)
..+++++ |+++|.+ +++...++.+..|+.... ....+. ......+.+++.++++++++.+. ++.+
T Consensus 66 ~~~~~~gla~~~dG~l-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~----~~~i 136 (302)
T d2p4oa1 66 VEGKVSGLAFTSNGDL-----VATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY----RGAI 136 (302)
T ss_dssp CSSEEEEEEECTTSCE-----EEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT----TTEE
T ss_pred CCCCCCEEEECCCCCE-----EEEECCCCEEEEEEECCCCCCEEECCCCCCCCCCCEEEECCCCCEEEECCC----CCCC
T ss_conf 7998536898677886-----998328953788871011110121023578632216677157978750356----5541
Q ss_pred EEEEECCCCCCC--------C--CCCCCCCCCCEEEEECCCCE--E-ECCCCEEEEECCCCCEEEEEECCCCCCCCCCCC
Q ss_conf 668730000124--------4--44641100214885068821--2-036727986268885799952245444456899
Q 000399 1356 QKWELTRINCVS--------G--YYGHEEVVNDICVLSSSGRI--A-SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1566)
Q Consensus 1356 rIWDl~s~~~i~--------~--l~gH~~~V~sIafsp~~~~L--v-SgDgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~ 1422 (1566)
..++..++.... . ........+.+.+. +..+ + +..+.|..++............
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~--~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~----------- 203 (302)
T d2p4oa1 137 WLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVSNTEKMLLLRIPVDSTDKPGEPEI----------- 203 (302)
T ss_dssp EEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEEETTTTEEEEEEBCTTSCBCCCEE-----------
T ss_pred EEEECCCCCCEEEECCCCCCEEECCCCCCCCCCCCCC--CCCEEEECCCCCEEEECCCCCCCCCCCCCC-----------
T ss_conf 0242168730367518864014315763224320116--983044037887698634433332345310-----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHH
Q ss_conf 87556445687887777654435332234660577856430011578773376179998347832566316876668524
Q 000399 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1423 ~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~ 1502 (1566)
.........++++++ |+++++...++.|..++.. ++.......... ..
T Consensus 204 -----------------~~~~~~pdgia~d~d----------G~l~va~~~~~~V~~i~p~-G~~~~~~~~~~~----~~ 251 (302)
T d2p4oa1 204 -----------------FVEQTNIDDFAFDVE----------GNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG----VI 251 (302)
T ss_dssp -----------------EEESCCCSSEEEBTT----------CCEEEECBTTCCEEEECTT-CCEEEEECGGGT----CT
T ss_pred -----------------CCCCCCCCCEEECCC----------CCEEEEECCCCCEEEECCC-CCEEEEEECCCC----CC
T ss_conf -----------------158998752378799----------9999997489918998789-978999963789----88
Q ss_pred HHHHHHCCC
Q ss_conf 688762159
Q 000399 1503 LVSAICACG 1511 (1566)
Q Consensus 1503 ~V~sVa~sp 1511 (1566)
..++++|.+
T Consensus 252 ~pt~vafg~ 260 (302)
T d2p4oa1 252 GSTAVAFGQ 260 (302)
T ss_dssp TEEEEEECC
T ss_pred CCEEEEECC
T ss_conf 824899708
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.88 E-value=6e-05 Score=43.10 Aligned_cols=93 Identities=11% Similarity=0.007 Sum_probs=46.5
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCCCCEEEEE----EEHHH--HHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEC
Q ss_conf 688878878863333467-667787517533----20144--32137320210037602799604478853205668730
Q 000399 1289 PTPAASWDGPDFLGRVGG-LKDESPWKIKAS----ILSSI--RAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT 1361 (1566)
Q Consensus 1289 fSpdg~~~~~e~LaTgs~-Dg~I~iWdi~~~----~l~tl--~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~ 1361 (1566)
|+|+|++ ++.++. ...|.+|+.... ..... .......+.++|+|+++++...... +++|.+|++.
T Consensus 152 ~sPdG~~-----l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~---~~~V~v~~~~ 223 (365)
T d1jofa_ 152 FDPTETY-----LYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA---GNRICEYVID 223 (365)
T ss_dssp ECTTSSE-----EEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT---TTEEEEEEEC
T ss_pred ECCCCCE-----EEEEECCCCEEEEEECCCCCCEEECCCEEECCCCCCEEEEEECCCCCEEEEECCC---CCEEEEEEEC
T ss_conf 8899998-----9982079987999970688716652511112788740899988998669995158---9989999955
Q ss_pred CCCCCCCC-------------------CCCCCCCCCEEEEECCCCEE
Q ss_conf 00012444-------------------46411002148850688212
Q 000399 1362 RINCVSGY-------------------YGHEEVVNDICVLSSSGRIA 1389 (1566)
Q Consensus 1362 s~~~i~~l-------------------~gH~~~V~sIafsp~~~~Lv 1389 (1566)
..+..... ..+......+.++|+++++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~ly 270 (365)
T d1jofa_ 224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEE
T ss_conf 98753778731240245565566654444357763169989999789
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.87 E-value=2.5e-05 Score=45.46 Aligned_cols=16 Identities=19% Similarity=0.212 Sum_probs=6.8
Q ss_pred CEEEEECCCCCEEEEE
Q ss_conf 2798626888579995
Q 000399 1394 TLHVWNSQTGKLLSVF 1409 (1566)
Q Consensus 1394 tI~IWD~~tg~~i~~l 1409 (1566)
.+.++|..+|++...+
T Consensus 281 ~i~~~d~~tg~~~~~~ 296 (465)
T d1xfda1 281 ILTLCDATTGVCTKKH 296 (465)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCCEEEEE
T ss_conf 3799707999278778
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.65 E-value=0.00016 Score=40.43 Aligned_cols=218 Identities=13% Similarity=0.023 Sum_probs=100.8
Q ss_pred CCCCCCEEEEEEEHHHH-----HCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCC---CCCCC-CCCCC
Q ss_conf 67787517533201443-----21373202100376027996044788532056687300001244---44641-10021
Q 000399 1308 KDESPWKIKASILSSIR-----AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSG---YYGHE-EVVND 1378 (1566)
Q Consensus 1308 g~I~iWdi~~~~l~tl~-----gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~---l~gH~-~~V~s 1378 (1566)
++|..||..++....+. .-.+.-..++|.++++.++.+.. ...+...+..+...... ..+.. ...++
T Consensus 46 g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~~l~vad~----~~~i~~~~~~g~~~~~~~~~~~g~~~~~pnd 121 (314)
T d1pjxa_ 46 GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM----RLGLLVVQTDGTFEEIAKKDSEGRRMQGCND 121 (314)
T ss_dssp CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET----TTEEEEEETTSCEEECCSBCTTSCBCBCCCE
T ss_pred CEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCCCEEEEEEC----CCEEEEEECCCCEEEEEECCCCCCCCCCCCE
T ss_conf 999999899995999977765567885306999079998999977----9839999477747999733432454578727
Q ss_pred EEEEECCCCEEEC-CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 4885068821203-672798626888579995224544445689987556445687887777654435332234660577
Q 000399 1379 ICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYT 1457 (1566)
Q Consensus 1379 Iafsp~~~~LvSg-DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t 1457 (1566)
+++.++++..++. .+....|+..... ....+.+..++.+. ........-..-+.++|+++.
T Consensus 122 l~~d~~G~lyvtd~~~~~~~~~~~~~~---------------~~~~G~v~~~~~dg-~~~~~~~~~~~pNGi~~~~d~-- 183 (314)
T d1pjxa_ 122 CAFDYEGNLWITAPAGEVAPADYTRSM---------------QEKFGSIYCFTTDG-QMIQVDTAFQFPNGIAVRHMN-- 183 (314)
T ss_dssp EEECTTSCEEEEECBCBCTTSCCCBTT---------------SSSCEEEEEECTTS-CEEEEEEEESSEEEEEEEECT--
T ss_pred EEECCCCCEEEECCCCCCCCCCCCCEE---------------CCCCCEEEEEEECC-CEEEEECCCCEEEEEEECCCC--
T ss_conf 898889989991486675432011000---------------26884389995257-403750785322136997887--
Q ss_pred HHHHHHCC---CEEEEEECCCEEEEEECCCCCEEEEEC---CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 85643001---157877337617999834783256631---687666852468876215998544798544435787035
Q 000399 1458 CLHHIECV---ERLVVGIGNGSLRFIDINQGQKLHLWR---GEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1531 (1566)
Q Consensus 1458 ~l~~s~dg---~~Lvsgs~DgtIriWDi~sg~~l~~l~---~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs 1531 (1566)
++ .++++-+..+.|..+|+.....+...+ ..... .......+++ ..+|++.++..
T Consensus 184 ------d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~--~~~~pdGiav-----------D~~GnlyVa~~ 244 (314)
T d1pjxa_ 184 ------DGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT--HEGGADGMDF-----------DEDNNLLVANW 244 (314)
T ss_dssp ------TSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC--SSCEEEEEEE-----------BTTCCEEEEEE
T ss_pred ------CCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCC--CCCCCEEEEE-----------ECCCCEEEEEC
T ss_conf ------7630379998602431177611676543015689971335--6664102578-----------34785799982
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCEEEEEEEECCC
Q ss_conf 87733677602585147740257604676630159
Q 000399 1532 SSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1532 ~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafsPdG 1566 (1566)
..+.|.+||...++.+..+.......++++|.||+
T Consensus 245 ~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~ 279 (314)
T d1pjxa_ 245 GSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQT 279 (314)
T ss_dssp TTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTS
T ss_pred CCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCC
T ss_conf 79999999699997999997999987899992898
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.63 E-value=0.00016 Score=40.42 Aligned_cols=104 Identities=9% Similarity=-0.068 Sum_probs=56.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE--EHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCC
Q ss_conf 26888788788633334676677875175332--0144321373202100376027996044788532056687300001
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKASI--LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1566)
Q Consensus 1288 ~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~--l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~ 1365 (1566)
++.++|..+ ++..+..+.+..++..+.. .....+ ......+++.+++..+++... .+.+++++..+...
T Consensus 20 avd~dG~i~----v~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~p~gvav~~~g~i~v~d~~----~~~i~~~~~~~~~~ 90 (260)
T d1rwia_ 20 AVDSAGNVY----VTSEGMYGRVVKLATGSTGTTVLPFNG-LYQPQGLAVDGAGTVYVTDFN----NRVVTLAAGSNNQT 90 (260)
T ss_dssp EECTTCCEE----EEECSSSCEEEEEC----CEEECCCCS-CCSCCCEEECTTCCEEEEETT----TEEEEECTTCSCCE
T ss_pred EECCCCCEE----EEECCCCCEEEEECCCCCEEEEECCCC-CCCCEEEEECCCCCEEEEEEE----ECEEEEEEECCCEE
T ss_conf 996999999----997189988999938996689743698-668408999389988986310----00035542112000
Q ss_pred CCCCCCCCCCCCCEEEEECCCCEEEC--CCCEEEEECC
Q ss_conf 24444641100214885068821203--6727986268
Q 000399 1366 VSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ 1401 (1566)
Q Consensus 1366 i~~l~gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~ 1401 (1566)
.....+ -....++++.++++.+++- ...+..++..
T Consensus 91 ~~~~~~-~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~ 127 (260)
T d1rwia_ 91 VLPFDG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAG 127 (260)
T ss_dssp ECCCCS-CCSEEEEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred EEEEEE-EEECCCCCCCCCCEEEEECCCCCCCCCCCCC
T ss_conf 000100-0000000245532057503355532112322
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.62 E-value=2.3e-06 Score=51.84 Aligned_cols=114 Identities=12% Similarity=0.025 Sum_probs=62.8
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456-99831
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV 238 (1566)
....|+..+..+-++.+.||+.. .++..+.+|......... ..... +|...+..+. +--+.
T Consensus 12 ~~~~~~~~~~~~G~s~~~v~rv~--------~~~~~~vlk~~~~~~~~~--~~~~~--------~E~~~l~~l~~~vpvP 73 (263)
T d1j7la_ 12 LIEKYRCVKDTEGMSPAKVYKLV--------GENENLYLKMTDSRYKGT--TYDVE--------REKDMMLWLEGKLPVP 73 (263)
T ss_dssp HHTTSEEEECSCCCSSSEEEEEE--------CSSCEEEEEEECGGGTTS--TTCHH--------HHHHHHHHHTTTSCCC
T ss_pred HHHCEEEEECCCCCCCCCEEEEE--------ECCCEEEEEECCCCCCCC--HHHHH--------HHHHHHHHHHCCCCCC
T ss_conf 51352799767899877189999--------089869999848876532--55699--------9999999876069987
Q ss_pred CCCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 200110135731230248864-222130149111120147899999999999987622556
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIA 298 (1566)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIi 298 (1566)
+++.+...++..|+||++++| ++.+... +......++.++...+..||+...-
T Consensus 74 ~vl~~~~~~~~~~lv~~~l~G~~~~~~~~-------~~~~~~~~~~~l~~~l~~lH~~~~~ 127 (263)
T d1j7la_ 74 KVLHFERHDGWSNLLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDIS 127 (263)
T ss_dssp CEEEEEEETTEEEEEEECCSSEEHHHHTT-------TCSCHHHHHHHHHHHHHHHHTSCCT
T ss_pred CEEEEEECCCCEEEEEEECCCCCCCCCCC-------CCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 28999750896499998604334354334-------4026999999899999998556842
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.57 E-value=0.00055 Score=37.12 Aligned_cols=214 Identities=10% Similarity=0.043 Sum_probs=108.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHH------CCCCCEEEEECCC-CEEEEEECCCCCCCCCEEEEEE
Q ss_conf 26888788788633334676677875175332014432------1373202100376-0279960447885320566873
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRA------HHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWEL 1360 (1566)
Q Consensus 1288 ~fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~l~tl~g------H~~~V~siafspd-g~~lvSgS~~~g~DgtVrIWDl 1360 (1566)
+++++|.. +++-.....|++||.++..+..+.. ....-..+++.++ +..+++... .++.|..++.
T Consensus 29 avd~dg~i-----~VaD~~n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~i~~~~~ 100 (279)
T d1q7fa_ 29 AVNAQNDI-----IVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS---PTHQIQIYNQ 100 (279)
T ss_dssp EECTTCCE-----EEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG---GGCEEEEECT
T ss_pred EECCCCCE-----EEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCC---CCCCCCCCCC
T ss_conf 99499989-----999799898999969999999816657886642266300012344552000047---7531000002
Q ss_pred CCCCCCCCCC-CCCCCCCCEEEEECCCCEEEC--CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0000124444-641100214885068821203--6727986268885799952245444456899875564456878877
Q 000399 1361 TRINCVSGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1437 (1566)
Q Consensus 1361 ~s~~~i~~l~-gH~~~V~sIafsp~~~~LvSg--DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~ 1437 (1566)
. ++....+. ..-.....+++.+++..+++. .+.+.++|.. ++.+..+...
T Consensus 101 ~-g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~------------------------- 153 (279)
T d1q7fa_ 101 Y-GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCS------------------------- 153 (279)
T ss_dssp T-SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECT-------------------------
T ss_pred C-CCCEEECCCCCCCCCCEECCCCCCCEEEEEECCCEEEEECCC-CCEEECCCCC-------------------------
T ss_conf 5-630240388864254200001478479996326325676268-7501002200-------------------------
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 77654435332234660577856430011578773376179998347832566316876668524688762159985447
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1566)
Q Consensus 1438 ~~~~~~~~V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~ 1517 (1566)
.+......++++++ ++.+++....+.|+++|.. ++.+.++.... . ......+|++
T Consensus 154 ---~~~~~~~~i~~d~~----------g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g-~---~~~P~giavD------- 208 (279)
T d1q7fa_ 154 ---KHLEFPNGVVVNDK----------QEIFISDNRAHCVKVFNYE-GQYLRQIGGEG-I---TNYPIGVGIN------- 208 (279)
T ss_dssp ---TTCSSEEEEEECSS----------SEEEEEEGGGTEEEEEETT-CCEEEEESCTT-T---SCSEEEEEEC-------
T ss_pred ---CCCCCCCEEEECCC----------EEEEEEECCCCCEEEEECC-CCEEEEECCCC-C---CCCCCCCCCC-------
T ss_conf ---10256624320120----------0178620135510023047-94445301132-1---1487623231-------
Q ss_pred CCCCCCHHHHHHCC-CCCCEEEEEECCCCEEEEEECC--CCEEEEEEEECCC
Q ss_conf 98544435787035-8773367760258514774025--7604676630159
Q 000399 1518 GGAVASPSWIAAGL-SSGQCRLFDVRSGNVIASWRAH--DGYVTKVRIISKR 1566 (1566)
Q Consensus 1518 ~~~spdG~~LaSGs-~Dg~I~iWD~rtg~~i~~l~~H--~~~Vt~lafsPdG 1566 (1566)
++|+++++-+ .++.|.+|+ .+|+.+.++... ......|++.|||
T Consensus 209 ----~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG 255 (279)
T d1q7fa_ 209 ----SNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDG 255 (279)
T ss_dssp ----TTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTT
T ss_pred ----CCCEEEEEECCCCCEEEEEC-CCCCEEEEEECCCCCCCEEEEEEECCC
T ss_conf ----47869999789980899999-999999999688888988379990899
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.50 E-value=0.00053 Score=37.24 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=26.7
Q ss_pred CCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCC
Q ss_conf 011578773376179998347832566316876668524688762159
Q 000399 1464 CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1511 (1566)
Q Consensus 1464 dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sp 1511 (1566)
+|++.++.-..+.|..+|. .++.+..+.... ..++++||.+
T Consensus 209 ~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~------~~~T~~~FGG 249 (295)
T d2ghsa1 209 EGHIWNARWGEGAVDRYDT-DGNHIARYEVPG------KQTTCPAFIG 249 (295)
T ss_dssp TSCEEEEEETTTEEEEECT-TCCEEEEEECSC------SBEEEEEEES
T ss_pred CCCEEEEEECCCCEEEECC-CCCEEEEECCCC------CCEEEEEEEC
T ss_conf 9998953207884688569-992866863899------8527989828
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.42 E-value=0.0003 Score=38.75 Aligned_cols=111 Identities=10% Similarity=-0.052 Sum_probs=60.1
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCC--CEEEEEECCCC
Q ss_conf 6888--7887886333346766778751753320144321373202100376027996044788532--05668730000
Q 000399 1289 PTPA--ASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG--TVQKWELTRIN 1364 (1566)
Q Consensus 1289 fSpd--g~~~~~e~LaTgs~Dg~I~iWdi~~~~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~Dg--tVrIWDl~s~~ 1364 (1566)
.||+ |+. ++-.+ ++.+.+.|+.++....+..+.+.+...+|+|||+.|+..+...+.+. .+.+++..+++
T Consensus 6 ~sPdi~G~~-----v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~ 79 (281)
T d1k32a2 6 LNPDIHGDR-----IIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE 79 (281)
T ss_dssp EEEEEETTE-----EEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE
T ss_pred CCCCCCCCE-----EEEEE-CCCEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCC
T ss_conf 588879999-----99990-996899989999879976699852677987899989999862898772289999825995
Q ss_pred CCCCC------CCCCCCCCCEEEEECCCCEEEC--------CCCEEEEECCCCCE
Q ss_conf 12444------4641100214885068821203--------67279862688857
Q 000399 1365 CVSGY------YGHEEVVNDICVLSSSGRIASC--------DGTLHVWNSQTGKL 1405 (1566)
Q Consensus 1365 ~i~~l------~gH~~~V~sIafsp~~~~LvSg--------DgtI~IWD~~tg~~ 1405 (1566)
..... ...........|+|+++.++.. ...+...+...+..
T Consensus 80 ~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (281)
T d1k32a2 80 IKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINF 134 (281)
T ss_dssp EEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEE
T ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEE
T ss_conf 2886416887547644434310279887799997137876520246515877606
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.10 E-value=0.00092 Score=35.72 Aligned_cols=54 Identities=13% Similarity=-0.069 Sum_probs=24.8
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCEEE--EEEEHHHHHCCCCCEEEEECCCCEEEEEECC
Q ss_conf 6888788788633334676-677875175--3320144321373202100376027996044
Q 000399 1289 PTPAASWDGPDFLGRVGGL-KDESPWKIK--ASILSSIRAHHGALRSVAVGQDECTVFTAGI 1347 (1566)
Q Consensus 1289 fSpdg~~~~~e~LaTgs~D-g~I~iWdi~--~~~l~tl~gH~~~V~siafspdg~~lvSgS~ 1347 (1566)
+||||++ |+-.... +...+|... +.....+..+.+......|+|++..++..+.
T Consensus 46 wSPDGk~-----IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~i~~~~~ 102 (269)
T d2hqsa1 46 WSPDGSK-----LAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALS 102 (269)
T ss_dssp ECTTSSE-----EEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEEC
T ss_pred ECCCCCE-----EEEEEEECCCCCEEEEECCCCCEEEEEEEECCCCCCEECCCCCEEEEEEE
T ss_conf 8789998-----99998152675134431136750677642024543024488986467640
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.76 E-value=4.1e-05 Score=44.13 Aligned_cols=31 Identities=6% Similarity=0.163 Sum_probs=25.9
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 2556777567872101100123424076877765
Q 000399 295 LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 295 ~gIiHrDLKP~NILl~~~~~~~iKI~DFGla~~~ 328 (1566)
..++|+|+.|.|||++++. ++|+||-.|...
T Consensus 223 ~~LiHGDl~~gNIlv~~~~---~~vID~E~a~~G 253 (392)
T d2pula1 223 ETLIHGDLHTGSIFASEHE---TKVIDPEFAFYG 253 (392)
T ss_dssp CEEECSCCCGGGEEECSSC---EEECCCTTCEEE
T ss_pred CCEECCCCCCCCEEECCCC---EEEECHHHCCCC
T ss_conf 6003357767846675993---089522652228
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.25 E-value=0.0001 Score=41.67 Aligned_cols=90 Identities=18% Similarity=0.152 Sum_probs=46.2
Q ss_pred HHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCEEEE
Q ss_conf 56999973102677100010111335421446622110120217778788999874569--9831200110135731230
Q 000399 176 SIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PNVAPVLGLLKTSGLITSV 253 (1566)
Q Consensus 176 G~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H--pNIV~l~~~~~~~~~l~lV 253 (1566)
+.||+... ..+..+.+|........ . +. +|...++.+.. --+.+++.+..+++..++|
T Consensus 25 ~~v~r~~~-------~~~~~~vlK~~~~~~~~-----~-l~-------~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v 84 (255)
T d1nd4a_ 25 AAVFRLSA-------QGRPVLFVKTDLSGALN-----E-LQ-------DEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 84 (255)
T ss_dssp CEEEEEEC-------TTSCCEEEEEECSCTTS-----C-HH-------HHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred CEEEEEEE-------CCCCEEEEEECCCCCHH-----H-HH-------HHHHHHHHHHHCCCCCCCEEEECCCCCCEEEE
T ss_conf 75899993-------89878999958966776-----8-99-------99999999986599988613222456615999
Q ss_pred CCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 248864-222130149111120147899999999999987622
Q 000399 254 IPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL 295 (1566)
Q Consensus 254 ~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~ 295 (1566)
|++++| ++.+... .. ...+.++...+.-||..
T Consensus 85 ~~~i~G~~~~~~~~-------~~---~~~~~~l~~~la~LH~~ 117 (255)
T d1nd4a_ 85 LGEVPGQDLLSSHL-------AP---AEKVSIMADAMRRLHTL 117 (255)
T ss_dssp EECCSSEETTTSCC-------CH---HHHHHHHHHHHHHHTTS
T ss_pred EEEEECCCCCCCCC-------CH---HHHHHHHHHHHHHHCCC
T ss_conf 87441355432212-------68---99999999999987368
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=96.13 E-value=0.021 Score=27.35 Aligned_cols=217 Identities=12% Similarity=0.009 Sum_probs=113.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE-EHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEEC--CCCC
Q ss_conf 6888788788633334676677875175332-014432137320210037602799604478853205668730--0001
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKASI-LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT--RINC 1365 (1566)
Q Consensus 1289 fSpdg~~~~~e~LaTgs~Dg~I~iWdi~~~~-l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~--s~~~ 1365 (1566)
+.++|.+ .++-...++|..|+..+.. ...+.........+++.+|+..+++... +++....++.+. +...
T Consensus 47 ~D~~G~L-----y~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~--~~~~~~~i~~~~~~~~~~ 119 (319)
T d2dg1a1 47 FDRQGQL-----FLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLG--DFKSTGGIFAATENGDNL 119 (319)
T ss_dssp ECTTSCE-----EEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECT--TSSSCCEEEEECTTSCSC
T ss_pred ECCCCCE-----EEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECC--CCCCCEEEEEECCCCCEE
T ss_conf 9999999-----999779999999989999599999489987038999999999999568--973110499873899636
Q ss_pred CCCCC--CCCCCCCCEEEEECCCCEEEC-C-------CCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 24444--641100214885068821203-6-------7279862688857999522454444568998755644568788
Q 000399 1366 VSGYY--GHEEVVNDICVLSSSGRIASC-D-------GTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1435 (1566)
Q Consensus 1366 i~~l~--gH~~~V~sIafsp~~~~LvSg-D-------gtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~ 1435 (1566)
..... .-....+.+++.++++..++. + +.+..++...+........
T Consensus 120 ~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~------------------------ 175 (319)
T d2dg1a1 120 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN------------------------ 175 (319)
T ss_dssp EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE------------------------
T ss_pred EEECCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEEEC------------------------
T ss_conf 44426777555875226773065320013540025742157884166335788612------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC-EEEEEECCCEEEEEECCCC-CEEEEECCCC--CCCCCHHHHHHHHCCC
Q ss_conf 7777654435332234660577856430011-5787733761799983478-3256631687--6668524688762159
Q 000399 1436 MLNSNTLSSGILSTAFDGNLYTCLHHIECVE-RLVVGIGNGSLRFIDINQG-QKLHLWRGEP--TELGFPSLVSAICACG 1511 (1566)
Q Consensus 1436 ~~~~~~~~~~V~siafsp~~~t~l~~s~dg~-~Lvsgs~DgtIriWDi~sg-~~l~~l~~h~--~~v~~~~~V~sVa~sp 1511 (1566)
-...+.++|+++ ++ ++++-+..+.|+.||+... .......... ....... ...+
T Consensus 176 -------~~~pnGia~s~d----------g~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~-PdGl---- 233 (319)
T d2dg1a1 176 -------ISVANGIALSTD----------EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEG-PDSC---- 233 (319)
T ss_dssp -------ESSEEEEEECTT----------SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSE-EEEE----
T ss_pred -------CCEEEEEEECCC----------CCEEEEECCCCCCEEEEEECCCCCEECCCCCEEEECCCCCCC-EEEE----
T ss_conf -------330100010122----------212787404689147999769983620246333312577641-0364----
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEE------CCCCEEEEEEEECCC
Q ss_conf 9854479854443578703587733677602585147740------257604676630159
Q 000399 1512 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR------AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1512 s~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~------~H~~~Vt~lafsPdG 1566 (1566)
.+..+|.+.++....+.|.+|| ..|+.+..+. ++...+++++|.|++
T Consensus 234 -------~vD~~G~l~Va~~~~g~V~~~~-p~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~ 286 (319)
T d2dg1a1 234 -------CIDSDDNLYVAMYGQGRVLVFN-KRGYPIGQILIPGRDEGHMLRSTHPQFIPGT 286 (319)
T ss_dssp -------EEBTTCCEEEEEETTTEEEEEC-TTSCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred -------EECCCCCEEEEECCCCEEEEEC-CCCCEEEEEECCCCCCCCCCEEEEEEEECCC
T ss_conf -------1738999999984899899997-9995988996887577867504667780799
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=94.32 E-value=0.078 Score=23.76 Aligned_cols=59 Identities=12% Similarity=0.073 Sum_probs=39.7
Q ss_pred CEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEE
Q ss_conf 61799983478325663168766685246887621599854479854443578703587733677602585147740
Q 000399 1475 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1566)
Q Consensus 1475 gtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~ 1551 (1566)
|.+.-||..+++.+-+.+..... .....+..|.++++|+.||.++.+|.++|+.+..++
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~------------------~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~~ 515 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPW------------------NGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAP 515 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSC------------------CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEECCCCCCEEEEECCCCCC------------------CCCEEEECCCEEEEECCCCEEEEEECCCCCEEEEEE
T ss_conf 61787578778667051688988------------------776079869989997799919999999886857998
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=94.18 E-value=0.084 Score=23.57 Aligned_cols=59 Identities=14% Similarity=0.204 Sum_probs=38.9
Q ss_pred CEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEE
Q ss_conf 61799983478325663168766685246887621599854479854443578703587733677602585147740
Q 000399 1475 GSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1566)
Q Consensus 1475 gtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~ 1551 (1566)
|.|.-+|..+++.+-+....... ....++..+.++++|+.||.++.+|.++|+.+..++
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~------------------~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~ 502 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAA------------------WGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC------------------CSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEECCCCCCEEEECCCCCCC------------------CCCEEEECCCEEEEECCCCEEEEEECCCCCEEEEEE
T ss_conf 61788536778464276789998------------------756059669979997789969999999986878998
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.29 E-value=0.12 Score=22.59 Aligned_cols=60 Identities=23% Similarity=0.328 Sum_probs=42.5
Q ss_pred CCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEE
Q ss_conf 761799983478325663168766685246887621599854479854443578703587733677602585147740
Q 000399 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1566)
Q Consensus 1474 DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~ 1551 (1566)
.|.|.-+|+.+++.+-+....... ....++..|..+++|+.||.++.+|..||+.+..++
T Consensus 465 ~G~l~AiD~~TG~i~W~~~~~~p~------------------~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~ 524 (582)
T d1flga_ 465 VGSLRAMDPVSGKVVWEHKEHLPL------------------WAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCC------------------CSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEECCCCCCEEEECCCCCCC------------------CCCEEEECCCEEEEECCCCEEEEEECCCCCEEEEEE
T ss_conf 775999807899587326779997------------------450169769869996799969999999986867988
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.19 E-value=0.12 Score=22.50 Aligned_cols=193 Identities=13% Similarity=0.042 Sum_probs=104.6
Q ss_pred CCCCCCEEEEEEEHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCCCCC--CC--CCCCCCCCEEEEE
Q ss_conf 6778751753320144321373202100376027996044788532056687300001244--44--6411002148850
Q 000399 1308 KDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSG--YY--GHEEVVNDICVLS 1383 (1566)
Q Consensus 1308 g~I~iWdi~~~~l~tl~gH~~~V~siafspdg~~lvSgS~~~g~DgtVrIWDl~s~~~i~~--l~--gH~~~V~sIafsp 1383 (1566)
+.|..||..++....+. ....+.++++.+++.+++++. + -+.++|..+++.... .. .....++++.+.+
T Consensus 40 ~~I~r~d~~~g~~~~~~-~~~~~~~i~~~~dg~l~va~~-----~-gl~~~d~~tg~~~~l~~~~~~~~~~~~nd~~vd~ 112 (295)
T d2ghsa1 40 RELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIASD-----D-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHP 112 (295)
T ss_dssp TEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEET-----T-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECT
T ss_pred CEEEEEECCCCEEEEEE-CCCCCEEEEEECCCCEEEEEE-----C-CCEEEECCCCEEEEEEEEECCCCCCCCEEEEECC
T ss_conf 99999989989599998-999817989965998899973-----7-6389504645135786640478766101357979
Q ss_pred CCCCEEEC------CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 68821203------672798626888579995224544445689987556445687887777654435332234660577
Q 000399 1384 SSGRIASC------DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYT 1457 (1566)
Q Consensus 1384 ~~~~LvSg------DgtI~IWD~~tg~~i~~l~~h~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~V~siafsp~~~t 1457 (1566)
+++..++. .+.-.+|....++....... -..-+.++|+++
T Consensus 113 ~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~-------------------------------~~~~Ng~~~s~d--- 158 (295)
T d2ghsa1 113 SGALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD-------------------------------ISIPNSICFSPD--- 158 (295)
T ss_dssp TSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEE-------------------------------ESSEEEEEECTT---
T ss_pred CCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEC-------------------------------CCCCCEEEECCC---
T ss_conf 9999887426431333305766229968998650-------------------------------687640246587---
Q ss_pred HHHHHHCCC-EEEEEECCCEEEEEECCCCC--E---EEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 856430011-57877337617999834783--2---56631687666852468876215998544798544435787035
Q 000399 1458 CLHHIECVE-RLVVGIGNGSLRFIDINQGQ--K---LHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL 1531 (1566)
Q Consensus 1458 ~l~~s~dg~-~Lvsgs~DgtIriWDi~sg~--~---l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs 1531 (1566)
++ ++++.+..+.|..+++.... . ...+...... .+....+++ ..+|.+.++.-
T Consensus 159 -------~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~---~g~pdG~~v-----------D~~GnlWva~~ 217 (295)
T d2ghsa1 159 -------GTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGI---KGGMDGSVC-----------DAEGHIWNARW 217 (295)
T ss_dssp -------SCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTS---SSEEEEEEE-----------CTTSCEEEEEE
T ss_pred -------CCEEEEEECCCCEEEEEEECCCCCCCCCCEEEEECCCCC---CCCCCCEEE-----------CCCCCEEEEEE
T ss_conf -------766898515663246764535555324535788416755---566632678-----------69999895320
Q ss_pred CCCCEEEEEECCCCEEEEEECCCCEEEEEEEE
Q ss_conf 87733677602585147740257604676630
Q 000399 1532 SSGQCRLFDVRSGNVIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1532 ~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~lafs 1563 (1566)
..+.|..|| ..|+.+..+.--...+++++|-
T Consensus 218 ~~g~V~~~d-p~G~~~~~i~lP~~~~T~~~FG 248 (295)
T d2ghsa1 218 GEGAVDRYD-TDGNHIARYEVPGKQTTCPAFI 248 (295)
T ss_dssp TTTEEEEEC-TTCCEEEEEECSCSBEEEEEEE
T ss_pred CCCCEEEEC-CCCCEEEEECCCCCCEEEEEEE
T ss_conf 788468856-9992866863899852798982
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.11 E-value=0.054 Score=24.73 Aligned_cols=32 Identities=16% Similarity=0.137 Sum_probs=27.5
Q ss_pred HCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 2255677756787210110012342407687776
Q 000399 294 SLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 294 ~~gIiHrDLKP~NILl~~~~~~~iKI~DFGla~~ 327 (1566)
..|+||+|+.+.|++++.+. ..-|+||+.+..
T Consensus 182 ~~giIHgDl~~dNvl~~~~~--v~gvIDF~~~~~ 213 (316)
T d2ppqa1 182 PAGVIHADLFQDNVFFLGDE--LSGLIDFYFACN 213 (316)
T ss_dssp CEEEECSCCCGGGEEEETTE--EEEECCCTTCEE
T ss_pred CCCCCCCCCCHHHHHCCCCC--CEEEECCCCCCC
T ss_conf 45033378636564020454--126742221236
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.02 E-value=0.0087 Score=29.66 Aligned_cols=28 Identities=18% Similarity=0.465 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHCCCCCHHCCCHHHHHH
Q ss_conf 7899999999958885111000136988
Q 000399 1095 AASTLMAICQRIGPDLTALHVLPHLKEL 1122 (1566)
Q Consensus 1095 ~~~~~~~~~~r~g~~~~~~~~~~~l~~~ 1122 (1566)
|+.++-.++...|++-....+.|.+.++
T Consensus 461 A~~~L~~l~~~~~~~~~~~~i~~~l~~~ 488 (588)
T d1b3ua_ 461 ATSNLKKLVEKFGKEWAHATIIPKVLAM 488 (588)
T ss_dssp HHHHHHHHHHHHCHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 9999999999839387899999999998
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=89.14 E-value=0.0081 Score=29.87 Aligned_cols=17 Identities=24% Similarity=0.477 Sum_probs=11.1
Q ss_pred CCCCCCCCCCCCCCCCC
Q ss_conf 56777567872101100
Q 000399 297 IAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 297 IiHrDLKP~NILl~~~~ 313 (1566)
++|.|+.+.||++.+..
T Consensus 220 ~CHnDL~~~NiL~~~~~ 236 (395)
T d1nw1a_ 220 FCHNDLQEGNILLPKAS 236 (395)
T ss_dssp EECSCCCGGGEEEEC--
T ss_pred EEECCCCCCCEEECCCC
T ss_conf 88557885637653643
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=87.97 E-value=0.39 Score=19.46 Aligned_cols=60 Identities=13% Similarity=0.139 Sum_probs=41.0
Q ss_pred CCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEEEE
Q ss_conf 761799983478325663168766685246887621599854479854443578703587733677602585147740
Q 000399 1474 NGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1566)
Q Consensus 1474 DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~~LaSGs~Dg~I~iWD~rtg~~i~~l~ 1551 (1566)
.|.+.-||+.+++.+-++....... ...++..|.++++|+.||.++.+|..+|+.+..++
T Consensus 437 ~G~l~A~D~~tGk~~W~~~~~~~~~------------------gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~ 496 (560)
T d1kv9a2 437 SGALLAWDPVKQKAAWKVPYPTHWN------------------GGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFE 496 (560)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCC------------------CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEECCCCEEEEECCCCCCCC------------------CCEEEECCCEEEEECCCCCEEEEECCCCCEEEEEE
T ss_conf 6646887077883731025788887------------------74059879989997789819999999985827998
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=86.61 E-value=0.31 Score=20.02 Aligned_cols=29 Identities=17% Similarity=0.064 Sum_probs=23.7
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 255677756787210110012342407687776
Q 000399 295 LGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 295 ~gIiHrDLKP~NILl~~~~~~~iKI~DFGla~~ 327 (1566)
.++||+|+.|.|||++++. .++||+-+..
T Consensus 192 ~~liHgDlh~~NvL~~~~~----~~IDFdd~~~ 220 (325)
T d1zyla1 192 VLRLHGDCHAGNILWRDGP----MFVDLDDARN 220 (325)
T ss_dssp CEECCSSCSGGGEEESSSE----EECCCTTCCE
T ss_pred CEEECCCCCCCCEEEECCC----EEEECHHCCC
T ss_conf 1202478880428783893----5886520146
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.35 E-value=0.83 Score=17.38 Aligned_cols=90 Identities=10% Similarity=-0.052 Sum_probs=46.1
Q ss_pred CCCCCCCCHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 33223466057785643001157877337617999834783256631687666852468876215998544798544435
Q 000399 1446 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1566)
Q Consensus 1446 V~siafsp~~~t~l~~s~dg~~Lvsgs~DgtIriWDi~sg~~l~~l~~h~~~v~~~~~V~sVa~sps~~~~~~~~spdG~ 1525 (1566)
.+.+++++.. +++..+-+..+.|...|+............... ....++++ ++.
T Consensus 166 p~gl~iD~~~---------~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~----~~p~~lav-------------~~~ 219 (266)
T d1ijqa1 166 PNGITLDLLS---------GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRL----AHPFSLAV-------------FED 219 (266)
T ss_dssp EEEEEEETTT---------TEEEEEETTTTEEEEEETTSCSCEEEEECTTTT----SSEEEEEE-------------ETT
T ss_pred EEEEEEECCC---------CEEEEECCCCCEEEEEECCCCCEEEEEECCCCC----CCCEEEEE-------------ECC
T ss_conf 1699861335---------699995289679999989999779999389855----66479999-------------899
Q ss_pred HH-HHCCCCCCEEEEEECCCCEEEEEECCCCEEEEEE
Q ss_conf 78-7035877336776025851477402576046766
Q 000399 1526 WI-AAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVR 1561 (1566)
Q Consensus 1526 ~L-aSGs~Dg~I~iWD~rtg~~i~~l~~H~~~Vt~la 1561 (1566)
+| .+-..++.|...+..+|.....+......+..+.
T Consensus 220 ~ly~td~~~~~I~~~~~~~g~~~~~~~~~~~~p~~i~ 256 (266)
T d1ijqa1 220 KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 256 (266)
T ss_dssp EEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEE
T ss_pred EEEEEECCCCEEEEEECCCCCCEEEEECCCCCCEEEE
T ss_conf 9999989999699999989961599776899952899
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=80.14 E-value=0.85 Score=17.33 Aligned_cols=70 Identities=11% Similarity=0.014 Sum_probs=41.4
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCEEEEE---EEHHHHHCCCCCEEEEECCCCEEEEEECCCC--CCCCCEEEEEECC
Q ss_conf 6888788788633334676-67787517533---2014432137320210037602799604478--8532056687300
Q 000399 1289 PTPAASWDGPDFLGRVGGL-KDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGP--GFKGTVQKWELTR 1362 (1566)
Q Consensus 1289 fSpdg~~~~~e~LaTgs~D-g~I~iWdi~~~---~l~tl~gH~~~V~siafspdg~~lvSgS~~~--g~DgtVrIWDl~s 1362 (1566)
+.++|.+ ++.|+.+ .++.+||..+. ....+... ..-.+++..+|+..++.++... ..-..+.+||..+
T Consensus 83 ~~~~g~i-----~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~-r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~ 156 (387)
T d1k3ia3 83 MDGNGQI-----VVTGGNDAKKTSLYDSSSDSWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 156 (387)
T ss_dssp ECTTSCE-----EEECSSSTTCEEEEEGGGTEEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred EECCCCE-----EEEECCCCCCEEEECCCCCCCCCCCCCCCC-CCCCCEEEECCCCEEEECCCCCCCCCCCEEEEECCCC
T ss_conf 9468868-----986368886216756755744215656642-1013035531782665213663335432056634888
Q ss_pred CC
Q ss_conf 00
Q 000399 1363 IN 1364 (1566)
Q Consensus 1363 ~~ 1364 (1566)
.+
T Consensus 157 ~~ 158 (387)
T d1k3ia3 157 KT 158 (387)
T ss_dssp TE
T ss_pred CC
T ss_conf 95
|