Citrus Sinensis ID: 000410
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1553 | 2.2.26 [Sep-21-2011] | |||||||
| Q54S77 | 1966 | Probable serine/threonine | yes | no | 0.211 | 0.167 | 0.467 | 3e-81 | |
| Q99570 | 1358 | Phosphoinositide 3-kinase | yes | no | 0.218 | 0.250 | 0.416 | 2e-74 | |
| Q5R9I3 | 1358 | Phosphoinositide 3-kinase | yes | no | 0.216 | 0.247 | 0.415 | 1e-73 | |
| Q8VD65 | 1358 | Phosphoinositide 3-kinase | yes | no | 0.218 | 0.250 | 0.419 | 1e-72 | |
| P0C0R5 | 1358 | Phosphoinositide 3-kinase | yes | no | 0.218 | 0.250 | 0.416 | 5e-72 | |
| O42900 | 1706 | Serine/threonine-protein | yes | no | 0.194 | 0.177 | 0.436 | 3e-66 | |
| Q9UVG6 | 1340 | Putative serine/threonine | yes | no | 0.191 | 0.222 | 0.428 | 8e-65 | |
| P22219 | 1454 | Serine/threonine-protein | yes | no | 0.194 | 0.207 | 0.412 | 2e-62 | |
| Q63450 | 374 | Calcium/calmodulin-depend | no | no | 0.154 | 0.641 | 0.278 | 4e-10 | |
| Q91YS8 | 374 | Calcium/calmodulin-depend | no | no | 0.154 | 0.641 | 0.278 | 4e-10 |
| >sp|Q54S77|VPS15_DICDI Probable serine/threonine-protein kinase vps15 OS=Dictyostelium discoideum GN=vps15 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 304 bits (779), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 218/342 (63%), Gaps = 13/342 (3%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKH-DEGLVLVKVYFKR 59
MGN + A YL D +V K+ LG +RF K++ H +EG V+VK+Y KR
Sbjct: 1 MGNTVG----APIVSEYLEDEIGP--IVFKKSLGNARFLKTVKAYHSEEGYVVVKIYKKR 54
Query: 60 GDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPP 119
L +Y+ L I++ F ++ +Q + ETD++ YL+RQYF N+L DRLST P
Sbjct: 55 NTKESLEKYKIMLKEIKDNFNITPSFNIMPYQHFIETDRSGYLIRQYFHNNLYDRLSTRP 114
Query: 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179
FLS++EKK++AFQLL A++Q KG+ HGDIK ENVLVT+ NW+YLSDFA +KPT+IP D
Sbjct: 115 FLSMIEKKFIAFQLLKALEQSSFKGVFHGDIKSENVLVTTSNWVYLSDFACYKPTFIPED 174
Query: 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-V 238
+P+DFSF+FDT G+R CY+APERFYE + L P MDIF++GCVIAELFL+
Sbjct: 175 NPADFSFYFDTSGRRTCYIAPERFYETN--RGAPSNNELTPKMDIFSLGCVIAELFLDGF 232
Query: 239 PFFELSHLLAYRRGQYDPSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVV 297
P F+ S LL+YR+G+Y P + ++I D I+ +ILHMIQ +P+ R++ E Y+ + V
Sbjct: 233 PIFDFSQLLSYRKGEYSPEPIIRQRIQDPNIQTLILHMIQKDPDQRYTPEKYISKWNT-V 291
Query: 298 FPTYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGN 339
FP YFS F H F L +D RV F EI+ N
Sbjct: 292 FPQYFS-FAHQFIPELMRLENDDRVMCISDKFDEIVDIFKNN 332
|
Dictyostelium discoideum (taxid: 44689) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q99570|PI3R4_HUMAN Phosphoinositide 3-kinase regulatory subunit 4 OS=Homo sapiens GN=PIK3R4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 216/367 (58%), Gaps = 27/367 (7%)
Query: 1 MGNKIAKT--TQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFK 58
MGN++A +Q + E Y D+ ++ + LG +RFFK KH EGLV+VKV+
Sbjct: 1 MGNQLAGIAPSQILSVESYFSDI---HDFEYDKSLGSTRFFKVARAKHREGLVVVKVFAI 57
Query: 59 RGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTP 118
+ + L Y++ L ++ S + + + ++KAA L RQY ++L DR+ST
Sbjct: 58 QDPTLPLTSYKQELEELKIRLNSAQNCLPFQKASEKASEKAAMLFRQYVRDNLYDRISTR 117
Query: 119 PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178
PFL+ +EK+W+AFQ+L AV Q H+ G+ HGDIK ENV+VTSWNW+ L+DFASFKPTY+P
Sbjct: 118 PFLNNIEKRWIAFQILTAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPE 177
Query: 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHG---GEMQVAQD---------------APLKP 220
D+P+DF++FFDT +R CY+APERF + G E++ +D LK
Sbjct: 178 DNPADFNYFFDTSRRRTCYIAPERFVDGGMFATELEYMRDPSTPLVDLNSNQRTRGELKR 237
Query: 221 SMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLE 279
+MDIF+ GCVIAELF E VP F+LS LLAYR G + P Q L KI D IR+++ MI E
Sbjct: 238 AMDIFSAGCVIAELFTEGVPLFDLSQLLAYRNGHFFPEQVLNKIEDHSIRELVTQMIHRE 297
Query: 280 PELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNP---LHSDMRVAMCRSVFPEILKQM 336
P+ R AE YL+ FP F FL + + L +D R+ + R I+ +
Sbjct: 298 PDKRLEAEDYLKQQRGNAFPEIFYTFLQPYMAQFAKETFLSADERILVIRKDLGNIIHNL 357
Query: 337 MGNKSSE 343
G+ E
Sbjct: 358 CGHDLPE 364
|
Regulatory subunit of the PI3K complex. May regulate membrane trafficking late in the endocytic pathway. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q5R9I3|PI3R4_PONAB Phosphoinositide 3-kinase regulatory subunit 4 OS=Pongo abelii GN=PIK3R4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 214/363 (58%), Gaps = 27/363 (7%)
Query: 1 MGNKIAKT--TQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFK 58
MGN++A +Q + E Y D+ ++ + LG +RFFK KH EGLV+VKV+
Sbjct: 1 MGNQLAGIAPSQILSVESYFSDI---HDFEYDKSLGSTRFFKVARAKHREGLVVVKVFAI 57
Query: 59 RGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTP 118
+ + L Y++ L ++ S + + + ++KAA L RQY ++L DR+ST
Sbjct: 58 QDPTLPLTSYKQELEELKIRLNSAQNCLPFQKASEKASEKAAMLFRQYVRDNLYDRISTR 117
Query: 119 PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178
PFL+ +E +W+AFQ+L AV Q H+ G+ HGDIK ENV+VTSWNW+ L+DFASFKPTY+P
Sbjct: 118 PFLNNIENRWIAFQILTAVDQAHKPGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPE 177
Query: 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHG---GEMQVAQD---------------APLKP 220
D+P+DF++FFDT +R CY+APERF + G E++ +D LK
Sbjct: 178 DNPADFNYFFDTSRRRTCYIAPERFVDGGMFATELEYMRDPSTPLVDLNSNQRTRGELKR 237
Query: 221 SMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLE 279
+MDIF+ GCVIAELF E VP F+LS LLAYR G + P Q L KI D IR+++ MI E
Sbjct: 238 AMDIFSAGCVIAELFTEGVPLFDLSQLLAYRNGHFFPEQVLNKIEDHSIRELVTQMIHRE 297
Query: 280 PELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNP---LHSDMRVAMCRSVFPEILKQM 336
P+ R AE YL+ FP F FL + + L +D R+ + R I+ +
Sbjct: 298 PDKRLEAEDYLKQQRGNAFPEIFYTFLQPYMAQFAKETFLSADERILVIRKDLGNIIHNL 357
Query: 337 MGN 339
G+
Sbjct: 358 CGH 360
|
Regulatory subunit of the PI3K complex. May regulate membrane trafficking late in the endocytic pathway. Pongo abelii (taxid: 9601) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q8VD65|PI3R4_MOUSE Phosphoinositide 3-kinase regulatory subunit 4 OS=Mus musculus GN=Pik3r4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 215/367 (58%), Gaps = 27/367 (7%)
Query: 1 MGNKIAKT--TQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFK 58
MGN++A +Q + E Y D+ ++ + LG +RFFK KH EGLV+VKV+
Sbjct: 1 MGNQLAGIAPSQILSVESYFSDI---HDFEYDKSLGSTRFFKVARAKHREGLVVVKVFAI 57
Query: 59 RGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTP 118
+ + L Y++ L ++ S + + + ++KAA L RQY ++L DR+ST
Sbjct: 58 QDPTLPLTSYKQELEELKIRLHSAQNCLPFQKAAEKASEKAAMLFRQYVRDNLYDRISTR 117
Query: 119 PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178
PFL+ +EK+W+AFQ+L AV Q H+ G+ HGDIK ENV+VTSWNW+ L+DFASFKPTY+P
Sbjct: 118 PFLNNIEKRWIAFQILTAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPE 177
Query: 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHG---GEMQVAQD---------------APLKP 220
D+P+DF++FFDT +R CY+APERF + G E++ +D LK
Sbjct: 178 DNPADFNYFFDTSRRRTCYIAPERFVDGGMFATELEYMRDPSTPLVDLNSNQRARGELKR 237
Query: 221 SMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLE 279
+MDIF+ GCVIAELF E VP F+LS LLAYR G + P Q L KI D IR ++ MI E
Sbjct: 238 AMDIFSAGCVIAELFTEGVPLFDLSQLLAYRNGHFFPEQVLNKIEDRSIRDLVTQMINRE 297
Query: 280 PELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNP---LHSDMRVAMCRSVFPEILKQM 336
PE R AE YL+ FP F FL + + L +D R+ + R I+ +
Sbjct: 298 PEKRLEAEDYLKQQRGNAFPEIFYTFLQPYMAQFAKETFLSADERILVIRKDLGNIIHNL 357
Query: 337 MGNKSSE 343
G+ E
Sbjct: 358 CGHDLPE 364
|
Regulatory subunit of the PI3K complex. May regulate membrane trafficking late in the endocytic pathway. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P0C0R5|PI3R4_RAT Phosphoinositide 3-kinase regulatory subunit 4 OS=Rattus norvegicus GN=Pik3r4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 274 bits (700), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/367 (41%), Positives = 216/367 (58%), Gaps = 27/367 (7%)
Query: 1 MGNKIAKT--TQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFK 58
MGN++A +Q + E Y D+ ++ + LG +RFFK KH EGLV+VKV+
Sbjct: 1 MGNQLAGIAPSQILSVESYFSDI---HDFEYDKSLGSTRFFKVARAKHREGLVVVKVFAI 57
Query: 59 RGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTP 118
+ + L Y++ L ++ S + + + ++KAA L RQY ++L DR+ST
Sbjct: 58 QDPTLPLTSYKQELEELKIRLHSAQNCLPFQKAAEKASEKAAMLFRQYVRDNLYDRISTR 117
Query: 119 PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178
PFL+ +EK+W+AFQ+L AV Q H+ G+ HGDIK ENV+VTSWNW+ L+DFASFKPTY+P
Sbjct: 118 PFLNNIEKRWIAFQILTAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPE 177
Query: 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHG---GEMQVAQD---------------APLKP 220
D+P+DF++FFDT +R CY+APERF + G E++ +D LK
Sbjct: 178 DNPADFNYFFDTSRRRTCYIAPERFVDGGMFATELEYMRDPSTPLVDLNSNQRTRGELKR 237
Query: 221 SMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLE 279
+MDIF+ GCVIAELF E VP F+LS LLAYR G + P Q L KI D IR+++ MIQ E
Sbjct: 238 AMDIFSAGCVIAELFTEGVPLFDLSQLLAYRNGHFFPEQVLNKIEDRSIRELVTQMIQRE 297
Query: 280 PELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNP---LHSDMRVAMCRSVFPEILKQM 336
P R A+ YL+ FP F FL + + L +D R+ + R I+ +
Sbjct: 298 PGQRLEADDYLKQQRGNAFPEVFYTFLQPYMAQFAKETFLSADERILVIRKDLGNIIHNL 357
Query: 337 MGNKSSE 343
G+ E
Sbjct: 358 CGHDLPE 364
|
Regulatory subunit of the PI3K complex. May regulate membrane trafficking late in the endocytic pathway. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O42900|PPK19_SCHPO Serine/threonine-protein kinase ppk19 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ppk19 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/314 (43%), Positives = 186/314 (59%), Gaps = 12/314 (3%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGL-VLVKVYFKR 59
MG +++ E + +LP +N + LG S F ++ + +G VL+KV+ +
Sbjct: 1 MGIQLSTIQTPQFHELFEEELPEYHN---ERSLGDSHFLRTFRMQDRKGYDVLIKVFVNK 57
Query: 60 GDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPP 119
I L L +E S P+ + T +AAYL+R Y ++L DR+ST P
Sbjct: 58 LPEISLSSIVNLLKEEQENI-SYRVPNAVPYIKTLVTLRAAYLVRPYVTHNLYDRISTRP 116
Query: 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179
FL L EKKW+ FQLL + CH G+CHGDIK EN+L+TSWNW YLSDF+SFKPTY+P D
Sbjct: 117 FLELTEKKWIMFQLLKGISDCHRLGVCHGDIKSENILITSWNWAYLSDFSSFKPTYLPED 176
Query: 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 238
+P+D+ +FFDT +R+C +APERF Q APL P+MDIF++GCV AEL L E
Sbjct: 177 NPADYGYFFDTSSRRVCNIAPERFVPASQ----LQPAPLSPAMDIFSLGCVFAELLLEES 232
Query: 239 PFFELSHLLAYR-RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVV 297
P F LS L +Y+ G YD LE+I D + MIL M+ +P R SA++YLQ Y V
Sbjct: 233 PLFTLSQLFSYKAHGSYDLQSVLEQIEDKSTQNMILSMLDRDPSQRLSADAYLQKYRGTV 292
Query: 298 FPTYFSPFLHNFYC 311
FP F L++ YC
Sbjct: 293 FPACFYDTLYD-YC 305
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9UVG6|VPS15_PICPA Putative serine/threonine-protein kinase VPS15 OS=Komagataella pastoris GN=VPS15 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 131/306 (42%), Positives = 190/306 (62%), Gaps = 8/306 (2%)
Query: 5 IAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYID 64
+A T Q A Y+ L N+ + LG SRF K++ +D+G ++VKV K +D
Sbjct: 8 LAPTAQPIALSVYVDFLS---NIQYNKPLGTSRFLKTVKGLNDQGSIVVKVLVKPNSGLD 64
Query: 65 LREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLV 124
L E+ +L +R + +D P+V + ++ +A YL+R + +L +R+S P+L +
Sbjct: 65 LSEWVEKLEFLR--LKLLDVPNVIPYNLVIDSVRAGYLIRPFQQRTLYERVSIQPYLEPI 122
Query: 125 EKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184
EKKW+AFQL+ AV +CHE+G HGDIK ENVL+TSW+ ++L+DFA FKP Y+P ++PS F
Sbjct: 123 EKKWIAFQLIHAVMECHERGQYHGDIKSENVLLTSWDMVFLTDFAPFKPIYLPGNNPSQF 182
Query: 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFEL 243
SF+FDT + +CY+APERF G Q + L SMDIF++GC +AELFLE F L
Sbjct: 183 SFYFDTSRRNVCYVAPERFLGEGTPTQYQEVDKLTSSMDIFSLGCTVAELFLEGSVLFTL 242
Query: 244 SHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFS 303
L Y++G+Y PS L I D+ +R MI MI L+P R SA L+ + VFP YF
Sbjct: 243 PQLFKYKKGEYTPS--LSGIVDNDLRNMIQEMIDLDPRKRISAHDCLRKHRGKVFPEYFY 300
Query: 304 PFLHNF 309
FL+++
Sbjct: 301 SFLYDY 306
|
Involved in glucose-induced micropexophagy and ethanol-induced macropexophagy. Required for ATG2 recruitment to a perivacuolar compartment. Pichia pastoris (taxid: 4922) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P22219|VPS15_YEAST Serine/threonine-protein kinase VPS15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS15 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 18/320 (5%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEV-----LGGSRFFKSILCKHDEGLVLVKV 55
MG +++ QAS + SY VL+EV L SRF K+ G +++KV
Sbjct: 1 MGAQLSLVVQASPSIAIF-----SYIDVLEEVHYVSQLNSSRFLKTCKALDPNGEIVIKV 55
Query: 56 YFKRGDYIDLREYERRLFHIR-ETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDR 114
+ K D LR + +R IR ++F+ PHV + ET++A Y++RQ+ N+L DR
Sbjct: 56 FIKPKDQYSLRPFLQR---IRAQSFKLGQLPHVLNYSKLIETNRAGYMIRQHLKNNLYDR 112
Query: 115 LSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF-KP 173
LS P+L +E K++AFQLL A+K H I HGDIK EN+LVTSWNW L+DFA+F KP
Sbjct: 113 LSLRPYLQDIELKFIAFQLLNALKDIHNLNIVHGDIKTENILVTSWNWCILTDFAAFIKP 172
Query: 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233
Y+P D+P +F F+FDT +R CYLAPERF + + + L MDIF++GCVIAE
Sbjct: 173 VYLPEDNPGEFLFYFDTSKRRTCYLAPERFNSKLYQDGKSNNGRLTKEMDIFSLGCVIAE 232
Query: 234 LFLE-VPFFELSHLLAYRRGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYL 290
+F E P F LS L Y+ YD ++ +E++ + +R ++L MIQL+P R S + L
Sbjct: 233 IFAEGRPIFNLSQLFKYKSNSYDVNREFLMEEMNSTDLRNLVLDMIQLDPSKRLSCDELL 292
Query: 291 QNYAAVVFPTYFSPFLHNFY 310
Y + FP YF F+++++
Sbjct: 293 NKYRGIFFPDYFYTFIYDYF 312
|
Serine/threonine-protein kinase required for cytoplasm to vacuole transport (Cvt) and autophagy as a part of the autophagy-specific VPS34 PI3-kinase complex I. This complex is essential to recruit the ATG8-phosphatidylinositol conjugate and the ATG12-ATG5 conjugate to the pre-autophagosomal structure. Is also involved in endosome-to-Golgi retrograde transport as part of the VPS34 PI3-kinase complex II. This second complex is required for the endosome-to-Golgi retrieval of PEP1 and KEX2, and the recruitment of VPS5 and VPS7, two components of the retromer complex, to endosomal membranes (probably through the synthesis of a specific pool of phosphatidylinositol 3-phosphate recruiting the retromer to the endosomes). By regulating VPS34 kinase activity, VPS15 appears to be essential for the efficient delivery of soluble hydrolases to the yeast vacuole. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q63450|KCC1A_RAT Calcium/calmodulin-dependent protein kinase type 1 OS=Rattus norvegicus GN=Camk1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 29 LKEVLGGSRFFKSILC--KHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
++VLG F + IL K + LV +K K+ L E + + I HP+
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKA----LEGKEGSMENEIAVLHKIKHPN 77
Query: 87 VWAFQFWQETDKAAYLLRQYFFNS-LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGI 145
+ A E+ YL+ Q L DR+ F + + L FQ+L AVK H+ GI
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 146 CHGDIKCENVLVTSWNW---LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
H D+K EN+L S + + +SDF K +DP T Y+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-----MEDPGS---VLSTACGTPGYVAPE- 188
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYR---RGQYD-P 256
V P ++D +++G VIA + L PF++ + + + +Y+
Sbjct: 189 ---------VLAQKPYSKAVDCWSIG-VIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292
S + + I DS + I H+++ +PE RF+ E LQ+
Sbjct: 239 SPYWDDISDSA-KDFIRHLMEKDPEKRFTCEQALQH 273
|
Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, regulates transcription activators activity, cell cycle, hormone production, cell differentiation, actin filament organization and neurite outgrowth. Recognizes the substrate consensus sequence [MVLIF]-x-R-x(2)-[ST]-x(3)-[MVLIF]. Regulates axonal extension and growth cone motility in hippocampal and cerebellar nerve cells. Upon NMDA receptor-mediated Ca(2+) elevation, promotes dendritic growth in hippocampal neurons and is essential in synapses for full long-term potentiation (LTP) and ERK2-dependent translational activation. Downstream of NMDA receptors, promotes the formation of spines and synapses in hippocampal neurons by phopshorylating ARHGEF7/BETAPIX on 'Ser-516', which results in the enhancement of ARHGEF7 activity and activation of RAC1. Promotes neuronal differentiation and neurite outgrowth by activation and phosphorylation of MARK2 on 'Ser-91', 'Ser-92', 'Ser-93' and 'Ser-294'. Promotes nuclear export of HDAC5 and binding to 14-3-3 by phosphorylation of 'Ser-259' and 'Ser-498' in the regulation of muscle cell differentiation (By similarity). Regulates NUMB-mediated endocytosis by phosphorylation of NUMB on 'Ser-275' and 'Ser-294'. Involved in the regulation of basal and estrogen-stimulated migration of medulloblastoma cells through ARHGEF7/BETAPIX phosphorylation (By similarity). Is required for proper activation of cyclin-D1/CDK4 complex during G1 progression in diploid fibroblasts. Plays a role in K(+) and ANG2-mediated regulation of the aldosterone synthase (CYP11B2) to produce aldosterone in the adrenal cortex. Phosphorylates EIF4G3/eIF4GII. In vitro phosphorylates CREB1, ATF1, CFTR, MYL9, SYN1/synapsin I and SYNII/synapsin II. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: 7 |
| >sp|Q91YS8|KCC1A_MOUSE Calcium/calmodulin-dependent protein kinase type 1 OS=Mus musculus GN=Camk1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 123/276 (44%), Gaps = 36/276 (13%)
Query: 29 LKEVLGGSRFFKSILC--KHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
++VLG F + IL K + LV +K K+ L E + + I HP+
Sbjct: 22 FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKA----LEGKEGSMENEIAVLHKIKHPN 77
Query: 87 VWAFQFWQETDKAAYLLRQYFFNS-LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGI 145
+ A E+ YL+ Q L DR+ F + + L FQ+L AVK H+ GI
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 146 CHGDIKCENVLVTSWNW---LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
H D+K EN+L S + + +SDF K +DP T Y+APE
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSK-----MEDPGS---VLSTACGTPGYVAPE- 188
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYR---RGQYD-P 256
V P ++D +++G VIA + L PF++ + + + +Y+
Sbjct: 189 ---------VLAQKPYSKAVDCWSIG-VIAYILLCGYPPFYDENDAKLFEQILKAEYEFD 238
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292
S + + I DS + I H+++ +PE RF+ E LQ+
Sbjct: 239 SPYWDDISDSA-KDFIRHLMEKDPEKRFTCEQALQH 273
|
Calcium/calmodulin-dependent protein kinase that operates in the calcium-triggered CaMKK-CaMK1 signaling cascade and, upon calcium influx, regulates transcription activators activity, cell cycle, hormone production, cell differentiation, actin filament organization and neurite outgrowth. Recognizes the substrate consensus sequence [MVLIF]-x-R-x(2)-[ST]-x(3)-[MVLIF]. Regulates axonal extension and growth cone motility in hippocampal and cerebellar nerve cells. Upon NMDA receptor-mediated Ca(2+) elevation, promotes dendritic growth in hippocampal neurons and is essential in synapses for full long-term potentiation (LTP) and ERK2-dependent translational activation. Downstream of NMDA receptors, promotes the formation of spines and synapses in hippocampal neurons by phopshorylating ARHGEF7/BETAPIX on 'Ser-673', which results in the enhancement of ARHGEF7 activity and activation of RAC1. Promotes neuronal differentiation and neurite outgrowth by activation and phosphorylation of MARK2 on 'Ser-91', 'Ser-92', 'Ser-93' and 'Ser-294'. Promotes nuclear export of HDAC5 and binding to 14-3-3 by phosphorylation of 'Ser-259' and 'Ser-498' in the regulation of muscle cell differentiation. Regulates NUMB-mediated endocytosis by phosphorylation of NUMB on 'Ser-276' and 'Ser-295'. Involved in the regulation of basal and estrogen-stimulated migration of medulloblastoma cells through ARHGEF7/BETAPIX phosphorylation. Is required for proper activation of cyclin-D1/CDK4 complex during G1 progression in diploid fibroblasts. Plays a role in K(+) and ANG2-mediated regulation of the aldosterone synthase (CYP11B2) to produce aldosterone in the adrenal cortex. Phosphorylates EIF4G3/eIF4GII. In vitro phosphorylates CREB1, ATF1, CFTR, MYL9, SYN1/synapsin I and SYNII/synapsin II. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 EC: 7 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1553 | ||||||
| 359484532 | 1455 | PREDICTED: phosphoinositide 3-kinase reg | 0.935 | 0.998 | 0.764 | 0.0 | |
| 255546297 | 1455 | ATP binding protein, putative [Ricinus c | 0.935 | 0.998 | 0.756 | 0.0 | |
| 356497575 | 1521 | PREDICTED: phosphoinositide 3-kinase reg | 0.976 | 0.997 | 0.753 | 0.0 | |
| 356520822 | 1488 | PREDICTED: phosphoinositide 3-kinase reg | 0.956 | 0.998 | 0.746 | 0.0 | |
| 449435788 | 1445 | PREDICTED: phosphoinositide 3-kinase reg | 0.929 | 0.998 | 0.721 | 0.0 | |
| 449489804 | 1445 | PREDICTED: LOW QUALITY PROTEIN: phosphoi | 0.929 | 0.998 | 0.720 | 0.0 | |
| 297803098 | 1494 | kinase family protein [Arabidopsis lyrat | 0.960 | 0.998 | 0.705 | 0.0 | |
| 15233564 | 1494 | phosphoinositide-3-kinase, regulatory su | 0.960 | 0.998 | 0.709 | 0.0 | |
| 224088049 | 1209 | predicted protein [Populus trichocarpa] | 0.777 | 0.999 | 0.755 | 0.0 | |
| 357137425 | 1450 | PREDICTED: phosphoinositide 3-kinase reg | 0.925 | 0.991 | 0.540 | 0.0 |
| >gi|359484532|ref|XP_002280317.2| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2381 bits (6170), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1189/1555 (76%), Positives = 1300/1555 (83%), Gaps = 102/1555 (6%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRG 60
MGNKIA+TTQASA+EYYLHDLPSSYNLVLKEVLG RFFKSI CKHDEGLVLVKVYFKRG
Sbjct: 1 MGNKIARTTQASASEYYLHDLPSSYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRG 60
Query: 61 DYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF 120
D IDLREYERRLF I+ FR++DHPHVW FQFW ETDKAAYLLRQYFFN+L DRLST PF
Sbjct: 61 DSIDLREYERRLFQIQGIFRALDHPHVWPFQFWIETDKAAYLLRQYFFNNLHDRLSTRPF 120
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180
LSL+EKKWLAFQLL AVKQ HE G+CHGDIKCENVLVTSWNWLYL+DFASFKPTYIP DD
Sbjct: 121 LSLIEKKWLAFQLLCAVKQSHENGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDDD 180
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
PSDFSFFFDTGG+RLCYLAPERFYE GGEMQVAQ APL+PSMDIFAVGCV+AELFLE P
Sbjct: 181 PSDFSFFFDTGGRRLCYLAPERFYEPGGEMQVAQGAPLRPSMDIFAVGCVVAELFLEGQP 240
Query: 240 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299
FELS LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQL+PE RFSAESYLQNYA+++FP
Sbjct: 241 LFELSQLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLDPESRFSAESYLQNYASILFP 300
Query: 300 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVK 359
+YFSPFLHNFY C NPL SD RVA+C+S+F EI KQMM N S+E + + TP A K
Sbjct: 301 SYFSPFLHNFYSCLNPLDSDTRVAVCQSLFHEIHKQMMSNASAEVTSAELSTPLNATGCK 360
Query: 360 ESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPE 419
S++ V KQ LNL K +++E EKG + N+F LLGDI++L+ D K+SN S VK + E
Sbjct: 361 PSKQVVAKQKLNLTKNS-SRKQENEKGLIHNQFELLGDINSLLKDVKQSNNYSGVKSVVE 419
Query: 420 DVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTF 479
D PNS+ +NS +S G L+++IS+ F+KN +P LKKITM++L++LMSEYDSQSDTF
Sbjct: 420 DAPNSSH----QNSGKDSPGRLVETISNVFKKNDYPLLKKITMDDLNTLMSEYDSQSDTF 475
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
GMPFLPLP+D M CEG+VLIASLLCSC+RNVKLPH RR AILLLKS SL+IDDEDRLQRV
Sbjct: 476 GMPFLPLPQDCMSCEGMVLIASLLCSCIRNVKLPHLRRGAILLLKSCSLYIDDEDRLQRV 535
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
LP+VIAMLSDP AIVRCAALETLCDILPLVR+FPPSDAKIFPEYILPMLSMLPDDPEESV
Sbjct: 536 LPYVIAMLSDPVAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESV 595
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
RICYA +I++LALTAYGFL+HS+ LSEAGVLD+L++ KS + S ETS +LQ+ QL
Sbjct: 596 RICYARSISRLALTAYGFLIHSLSLSEAGVLDELNSQQKSLAPSTETSGRLQK----TQL 651
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRD 719
+QLRKSIAEVVQELVMGPKQTP+IRRALLQDIGNLC FFGQRQSNDFLLPILPAFLNDRD
Sbjct: 652 AQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPILPAFLNDRD 711
Query: 720 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 779
EQLRAVFYGQIVYVCFFVG+RSVEEYLLPYIEQALSDATEAVIVNALDCLA+LCKSG+LR
Sbjct: 712 EQLRAVFYGQIVYVCFFVGQRSVEEYLLPYIEQALSDATEAVIVNALDCLAVLCKSGFLR 771
Query: 780 KRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 839
KRILLEMI AFPLLCYPSQWVRRS VTFIAASSE+LGAVDSYVFLAPVIRPFLRRQPAS
Sbjct: 772 KRILLEMIAHAFPLLCYPSQWVRRSAVTFIAASSENLGAVDSYVFLAPVIRPFLRRQPAS 831
Query: 840 LASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGA 899
LAS KALLSCLKPPVSR+VFY+VLENARSSDMLERQRKIWYN+S Q KQ ET DL +RGA
Sbjct: 832 LASEKALLSCLKPPVSRQVFYEVLENARSSDMLERQRKIWYNSSVQPKQWETVDLHRRGA 891
Query: 900 EDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRD 959
E+L+ +K PD Q++ E
Sbjct: 892 EELNLMKSLPDGQRALE------------------------------------------- 908
Query: 960 PLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSL 1019
L FSGFM+ Q+ GVNS CDKSSEGIPLYSFSMDKRA G P ASDS LQ+NSL
Sbjct: 909 ------LQFSGFMTPQIGGVNSFICDKSSEGIPLYSFSMDKRAAGVPPAASDSSLQLNSL 962
Query: 1020 GIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASV 1079
G VVHEPE RENDQ A V
Sbjct: 963 GT------------------------------------------VVHEPESRENDQTAYV 980
Query: 1080 NCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHC 1139
N KF +MG SGT+KGSSI VED+SS D+TGLPSF RTSSIPD GWRPRG+LVAHLQEH
Sbjct: 981 NSKFQDMGISGTSKGSSITVEDSSSSTDITGLPSFARTSSIPDMGWRPRGVLVAHLQEHR 1040
Query: 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199
SAVN+IAIS DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTY LEGSRALCT MLR+S
Sbjct: 1041 SAVNDIAISTDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYPLEGSRALCTAMLRNS 1100
Query: 1200 AQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1258
AQV+VGACDGIIHMFSVD+ISRGLGN VEKYSGI+DIKKKD EGAI++L+NY D S
Sbjct: 1101 AQVIVGACDGIIHMFSVDYISRGLGNVVEKYSGIADIKKKDVGEGAILSLLNYCADGSPS 1160
Query: 1259 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
M MYSTQNCGIHLWDTR+NSN WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD
Sbjct: 1161 QMVMYSTQNCGIHLWDTRTNSNAWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1220
Query: 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378
LRFLVPVNSWQYS VCPIE++CLFVPPPNA+VST ARPLIYVAAGCNEVSLWNAENGSCH
Sbjct: 1221 LRFLVPVNSWQYSLVCPIEEICLFVPPPNASVSTMARPLIYVAAGCNEVSLWNAENGSCH 1280
Query: 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438
QVLR AN + D EMSDLPWA ARPSS+SN K D+RRNVN KYRVDELNEP RL GIRSL
Sbjct: 1281 QVLRVANNESDAEMSDLPWALARPSSKSNSKPDIRRNVNPKYRVDELNEPASRLPGIRSL 1340
Query: 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498
LPLPGGDLLTGGTDLKIRRWDH SP RSYCICGP +KGVGND+F+ET+SS GVQVVQE K
Sbjct: 1341 LPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPTIKGVGNDDFFETKSSFGVQVVQETK 1400
Query: 1499 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553
R+PL +KLT+KAVLAAAATDSAGCHRDS+LSL SVKLNQRLLISSSRDGAIKVWK
Sbjct: 1401 RRPLATKLTSKAVLAAAATDSAGCHRDSVLSLASVKLNQRLLISSSRDGAIKVWK 1455
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255546297|ref|XP_002514208.1| ATP binding protein, putative [Ricinus communis] gi|223546664|gb|EEF48162.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 2375 bits (6155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1177/1555 (75%), Positives = 1296/1555 (83%), Gaps = 102/1555 (6%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRG 60
MGNKIA+TTQ SATEYYLHDLPSSYNLVLKEVLG RFFKSILCKHDEGLV+VKVYFKRG
Sbjct: 1 MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVIVKVYFKRG 60
Query: 61 DYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF 120
D I+LREYERRL I++TF ++DHPHVW FQFWQETDKAAYLLRQ+FFN+L DRLST PF
Sbjct: 61 DPINLREYERRLELIKDTFLALDHPHVWPFQFWQETDKAAYLLRQFFFNNLHDRLSTRPF 120
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180
LS VEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYL+DFASFKPTYIPYDD
Sbjct: 121 LSPVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD 180
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
PSDFSFFFDTGG+RLCYLAPERFYEHGGEMQV+QDAPLKPSMDIFAVGCVIAELFLE
Sbjct: 181 PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVSQDAPLKPSMDIFAVGCVIAELFLEGQQ 240
Query: 240 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299
FELS LLAYRRGQYDPSQ+LEKIPDSGIRKMILHMIQLEPE R SAE YL NYA+VVFP
Sbjct: 241 LFELSQLLAYRRGQYDPSQNLEKIPDSGIRKMILHMIQLEPEARLSAEGYLLNYASVVFP 300
Query: 300 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVK 359
TYFSPFLHNFYCCWNPLHSDMRVAMCRSVF EILKQMM NK+ E+ +G+ + + M K
Sbjct: 301 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFHEILKQMMSNKTDEETVTGLCSSANCMGAK 360
Query: 360 ESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPE 419
++ V KQNL+L K KRE+ EKG V+++++LLGDI+TL+GD K+S +K PE
Sbjct: 361 PVEDIVEKQNLDLTKDS-TKREKTEKGLVRDQYKLLGDINTLLGDVKQSTD--YMKLTPE 417
Query: 420 DVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTF 479
NS FSQD+ +++S G+LLQ+IS+AF+KN HPFLKKITM++L+ LMSEYDSQSDTF
Sbjct: 418 SATNSAFSQDIEQCAMQSPGKLLQAISNAFQKNDHPFLKKITMDDLTLLMSEYDSQSDTF 477
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
G+PFLP PED+MKCEG+VLIASLLCSC+RNVKLPH RR AILLLKSSSL+IDDEDRLQRV
Sbjct: 478 GIPFLPTPEDNMKCEGMVLIASLLCSCIRNVKLPHLRRGAILLLKSSSLYIDDEDRLQRV 537
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
LP+VIAMLSDPAAIVR AALE+LCDILP VR+FPPSDAKIFPEYILPMLSMLPDDPEESV
Sbjct: 538 LPYVIAMLSDPAAIVRSAALESLCDILPFVRDFPPSDAKIFPEYILPMLSMLPDDPEESV 597
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
RICYASNIAKLALTAYGFL+HSI LSEAGVLD+++ KS +SS+ETS QLQ++ D QL
Sbjct: 598 RICYASNIAKLALTAYGFLIHSISLSEAGVLDEMNLARKSLASSSETSRQLQKVKNDSQL 657
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRD 719
+QLRKSIAEVVQELVMGPKQTP+IRRALLQDIG LC FFGQRQSNDFLLPILPAFLNDRD
Sbjct: 658 AQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGQRQSNDFLLPILPAFLNDRD 717
Query: 720 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 779
EQLRA+F+GQI+YVCFFVG+RSVEEYLLPYIEQALSD TEAV+VNALDCLA+LCK G+LR
Sbjct: 718 EQLRALFFGQIIYVCFFVGQRSVEEYLLPYIEQALSDQTEAVVVNALDCLAVLCKRGFLR 777
Query: 780 KRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 839
KRILLEMIE AFPLLCYPSQWVRRS V FIAASSESLGAVDSYVFLAPVIRPFLRRQPAS
Sbjct: 778 KRILLEMIEHAFPLLCYPSQWVRRSAVAFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 837
Query: 840 LASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGA 899
LAS K+LL CLK P S++VF +VLE ARSSDMLERQRKIWYN+S+QSK ETAD+L+R
Sbjct: 838 LASEKSLLLCLKSPFSKQVFSEVLEKARSSDMLERQRKIWYNSSAQSKHWETADVLQRED 897
Query: 900 EDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRD 959
+L SIK W DK KL+
Sbjct: 898 GELHSIKSWSDK----------------------------KLK----------------- 912
Query: 960 PLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSL 1019
KL FSG+MS Q+ GVNS DKSSEGIPLYSFSMD+RA P ASDS L++NSL
Sbjct: 913 -----KLQFSGYMSPQIGGVNSFIHDKSSEGIPLYSFSMDRRAAKISPAASDSSLRMNSL 967
Query: 1020 GIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASV 1079
GI E RENDQ A V
Sbjct: 968 GI-----------------------------------------------ESRENDQTAYV 980
Query: 1080 NCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHC 1139
+ KF EMG SG KG S+ VEDAS+ DLTGLPSF RT S+PDSGWRPRG+LVAHLQEH
Sbjct: 981 SNKFQEMGISGGTKGGSLTVEDASASTDLTGLPSFARTISVPDSGWRPRGVLVAHLQEHR 1040
Query: 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199
SAVN+IAIS+DHS FVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC++MLR+
Sbjct: 1041 SAVNDIAISNDHSLFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCSVMLRNF 1100
Query: 1200 AQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1258
+QVVVG CDG++H+FSVDHISRGLGN VEKYSGI+DIKKKD KEGAI++L+NY DN AS
Sbjct: 1101 SQVVVGGCDGMMHVFSVDHISRGLGNVVEKYSGIADIKKKDVKEGAILSLLNYTADNSAS 1160
Query: 1259 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
+ MYSTQNCGIHLWD R+N N WTLKA+PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD
Sbjct: 1161 QIVMYSTQNCGIHLWDIRANVNAWTLKAVPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1220
Query: 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378
LRFL+PVNSWQYS VCPIEKMCLFVPP N AVS+ ARPLIYVAAGCNEVSLWNAENGSCH
Sbjct: 1221 LRFLIPVNSWQYSLVCPIEKMCLFVPPSNVAVSSAARPLIYVAAGCNEVSLWNAENGSCH 1280
Query: 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438
QVLR ANYD D EMSD+PWA ARPS + N K D RR VN KYRVDELN+PPPRLLGIRS+
Sbjct: 1281 QVLRLANYDNDAEMSDMPWALARPSGKVNFKPDTRRKVNPKYRVDELNDPPPRLLGIRSM 1340
Query: 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498
LPLPGGDLLTGGTDLKIRRWDH SP +SYCICGPNL GVG+D+ YE RSS GVQ+VQE K
Sbjct: 1341 LPLPGGDLLTGGTDLKIRRWDHFSPKQSYCICGPNLNGVGSDDSYEIRSSYGVQIVQETK 1400
Query: 1499 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553
+ L + +TAKAV+AAAATDSAGCHRDSILSL SVKLNQRLLISSSRDGAIKVWK
Sbjct: 1401 GRHLNNTMTAKAVIAAAATDSAGCHRDSILSLASVKLNQRLLISSSRDGAIKVWK 1455
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356497575|ref|XP_003517635.1| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2320 bits (6013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1161/1541 (75%), Positives = 1304/1541 (84%), Gaps = 24/1541 (1%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRG 60
MGNKIA+TTQ SA+EYYLH+LPS+YNLVLKEVLG RFFKSI CKHDEGLVLVKVYFKRG
Sbjct: 1 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRG 60
Query: 61 DYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF 120
D++DL +YERRL I+ F SIDHPHVW FQFWQETDKAAYLLRQ+FF++L DRLST PF
Sbjct: 61 DFLDLSDYERRLSQIKHIFTSIDHPHVWPFQFWQETDKAAYLLRQFFFHNLHDRLSTRPF 120
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180
LSLVEKKWLAFQLL+AVKQCHE G+CHGDIKCENVL+TS NWLYL+DFASFKPTYIPYDD
Sbjct: 121 LSLVEKKWLAFQLLVAVKQCHENGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDD 180
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
PSDFSFFFDTGG+RLCYLAPERFYEHGGEMQVAQD PLKP MDIFAVGCV+AELFLE P
Sbjct: 181 PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDTPLKPYMDIFAVGCVVAELFLEGQP 240
Query: 240 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299
FELS LLAYRRGQYDPSQHLEKIPD GIRKMILHMIQLEPE RFSAE YL+ YAAVVFP
Sbjct: 241 LFELSQLLAYRRGQYDPSQHLEKIPDLGIRKMILHMIQLEPESRFSAERYLKEYAAVVFP 300
Query: 300 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVK 359
YFSPFLH+FY CW+PLHSDMRV +C+S FPEILKQMM NKS +D G G M K
Sbjct: 301 IYFSPFLHDFYRCWSPLHSDMRVLLCQSAFPEILKQMMNNKSYDDAGVNSGELLENMVAK 360
Query: 360 ESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPE 419
ES ++ L KRE++ KG V + + LLGDI++L+ D K++N S+V E
Sbjct: 361 ES--------VSFMNDSLMKREDIGKGLVHDHYELLGDINSLLRDAKKNNNQSHVA---E 409
Query: 420 DVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTF 479
+ NSTF ++L+N +G+LLQ+IS+AFR N HPFLK +TMN+L+SLMSEYDSQSDTF
Sbjct: 410 NAHNSTFPENLKNLQ---TGKLLQTISNAFRGNDHPFLKSVTMNDLNSLMSEYDSQSDTF 466
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
GMPFLPLP+DSM+CEG+VLI SLLCSC+RNVKLPH RRAA+LLLK+S+L+IDDEDRLQRV
Sbjct: 467 GMPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRV 526
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
+P+VI MLSD AAIVRCAALETLCDILPLVR+FPPSDAKIFPEYILPMLSMLPDDPEESV
Sbjct: 527 IPYVIVMLSDSAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESV 586
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
RICYASNIAKLALTAYGFL+HSI LSEAGVLD+LS+P K +SS +S +L+R+N D QL
Sbjct: 587 RICYASNIAKLALTAYGFLIHSICLSEAGVLDELSSPQKPLTSSTHSSGRLKRINGDAQL 646
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRD 719
QLRKSIAEVVQELVMGPKQTP+IRRALLQDIG LC FFG RQSND LLPILPAFLNDRD
Sbjct: 647 LQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCCFFGVRQSNDSLLPILPAFLNDRD 706
Query: 720 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 779
EQLR VFY +IVYVCFFVG+RSVEEYLLPYIEQALSD TEAVIV A++C+ ILCKSG+ R
Sbjct: 707 EQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDVTEAVIVKAVECMTILCKSGFFR 766
Query: 780 KRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 839
KRILL+MIERAFPLLCYPS+WVRRSVV+FIAASSE+LGAVDSYVFLAPVIRPFLRRQP S
Sbjct: 767 KRILLQMIERAFPLLCYPSEWVRRSVVSFIAASSENLGAVDSYVFLAPVIRPFLRRQPVS 826
Query: 840 LASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGA 899
LAS KALLSCLKPPVSR+VF++VLEN+RSSDMLERQRKIWY +SSQSK E DLLK+G
Sbjct: 827 LASEKALLSCLKPPVSRQVFFEVLENSRSSDMLERQRKIWY-SSSQSKLWEI-DLLKKGI 884
Query: 900 EDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRD 959
++L S+K W DKQQ + G +QP D + AKLR +G+ ++N S+ RD
Sbjct: 885 DELDSLKNWSDKQQGHGVQQTVGTAFQQPGITGCDKAE-AKLRDMGAFMHNDSNNVVHRD 943
Query: 960 PLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSL 1019
C EKL FSGFMS SG+NSL +K SEGIPLYSFS+D+R MG P ASD L +NSL
Sbjct: 944 TQCSEKLQFSGFMSPHFSGMNSLTYEKPSEGIPLYSFSVDRRGMGIPPAASDPPLPMNSL 1003
Query: 1020 GIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASV 1079
G+ SS MPW++ ++SF+LA+SVP P L SGSFSISNGSKQF+RVVHEPE REN + A V
Sbjct: 1004 GVSSSAMPWVNPLSKSFNLANSVPAPKLFSGSFSISNGSKQFHRVVHEPEAREN-ETAYV 1062
Query: 1080 NCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHC 1139
N F ++G S KG+SI +EDA+S DL+G PSF R +SIPDSGWRPRG+LVAHLQEH
Sbjct: 1063 NNTFQDVGLSANIKGTSIALEDATSQTDLSGFPSFAR-ASIPDSGWRPRGVLVAHLQEHL 1121
Query: 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199
SAVN+IAIS DHSFFVSASDDSTVK+WDSRKLEKDISFRS+LTYH+EGSR LC ML S
Sbjct: 1122 SAVNDIAISADHSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHMEGSRVLCATMLPGS 1181
Query: 1200 AQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1258
AQV++GA DG IHMFSVDHISRGLGN VEKYSGI+DI KKD KEGAI+ L+N DN
Sbjct: 1182 AQVIIGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDIKEGAILNLLNCPVDN--- 1238
Query: 1259 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
+ MYSTQNCGIHLWDTRSNSNTWTLKA PEEGY SSL +GPCGNWFVSGSSRGV+TLWD
Sbjct: 1239 YTIMYSTQNCGIHLWDTRSNSNTWTLKATPEEGYASSLASGPCGNWFVSGSSRGVITLWD 1298
Query: 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378
LRFL+PVNSWQYS CPIEKM LF+PP NA+VS+ ARPL+YVAAGCNEVSLWNAEN SCH
Sbjct: 1299 LRFLIPVNSWQYSLACPIEKMRLFLPPSNASVSSAARPLVYVAAGCNEVSLWNAENASCH 1358
Query: 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438
QVLRTANYD D EMSDLPWA ARPSS+ ++DLRRNVN+KY VDELNEPPPRL GIRSL
Sbjct: 1359 QVLRTANYDSDAEMSDLPWALARPSSKPTSQSDLRRNVNRKYGVDELNEPPPRLPGIRSL 1418
Query: 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498
LPLPGGDLLTGGTDLKIRRWDH SP RSYCICGPNLKG+GND+FYET+SS GVQVVQE K
Sbjct: 1419 LPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNLKGIGNDDFYETKSSFGVQVVQETK 1478
Query: 1499 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRL 1539
R+PLT KLTAKA+LAAAATDS +R I S + N L
Sbjct: 1479 RRPLTIKLTAKAILAAAATDSGIMNRGIIGSFIDIIFNLTL 1519
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520822|ref|XP_003529059.1| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2316 bits (6001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1161/1555 (74%), Positives = 1301/1555 (83%), Gaps = 69/1555 (4%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRG 60
MGNKIA+TTQ SA+EYYLH+LPS+YNLVLKEVLG RFFKSI CKHDEGLVLVKVYFKRG
Sbjct: 1 MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRG 60
Query: 61 DYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF 120
D++DL +YERRL I+ F SIDHPHVW FQFWQETDKAAYLLRQYFF++L DRLST PF
Sbjct: 61 DFLDLSDYERRLSQIKHIFTSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPF 120
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180
LSL+EKKWLAFQLL+AVKQCHE G+CHGDIKCENVL+TS NW+YL+DFASFKPTYIPYDD
Sbjct: 121 LSLIEKKWLAFQLLVAVKQCHENGVCHGDIKCENVLITSTNWVYLADFASFKPTYIPYDD 180
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
PSDFSFFFDTGG+RLCYLAPERFYEHGGEMQVAQD PLKP MDIFAVGCVIAELFLE P
Sbjct: 181 PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDTPLKPYMDIFAVGCVIAELFLEGQP 240
Query: 240 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299
FELS LLAYRRGQYDPSQHLEKIPD GIRKMILHMIQLEPE R SAE YL+ YAAVVFP
Sbjct: 241 LFELSQLLAYRRGQYDPSQHLEKIPDLGIRKMILHMIQLEPEFRLSAERYLKEYAAVVFP 300
Query: 300 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVK 359
YFSPFLH+FY CW+PLHSDMRV +C+S FPEILKQMM NKSS+D G
Sbjct: 301 IYFSPFLHDFYRCWSPLHSDMRVLLCQSAFPEILKQMMNNKSSDDAG------------- 347
Query: 360 ESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPE 419
+N A+ L EEM KES + ++
Sbjct: 348 ----------VNSAELL----EEMV--------------------AKESAKNAH------ 367
Query: 420 DVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTF 479
NSTF ++L+N +G+LLQ+IS+AFR N HPFLK ITMN+L+SLMSEYDSQSDTF
Sbjct: 368 ---NSTFPENLKNLQ---TGKLLQTISNAFRGNDHPFLKSITMNDLNSLMSEYDSQSDTF 421
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
GMPFLPLP+DSM+CEG+VLI SLLCSC+RNVKLPH RRAA+LLLK+S+L+IDDEDRLQRV
Sbjct: 422 GMPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRV 481
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
+P+VI MLSD AAIVRCAALETLCDILPLVR+FPPSDAKIFPEYILPMLSMLPDDPEESV
Sbjct: 482 IPYVIVMLSDSAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESV 541
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
RICYASNIAKLALTAYGFL+ SI LSEAGVLD+LS P K +SS +TS +++R+N D QL
Sbjct: 542 RICYASNIAKLALTAYGFLIRSISLSEAGVLDELSLPQKPLTSSTQTSGRMKRINGDAQL 601
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRD 719
QLRKSIAEVVQELVMGPKQTP+IRRALLQDIG LC FFG RQSND LLPILPAFLNDRD
Sbjct: 602 LQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCCFFGVRQSNDSLLPILPAFLNDRD 661
Query: 720 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 779
EQLR VFY +IVYVCFFVG+RSVEEYLLPYIEQALSD TEAVIV A++C+ ILCKSG+ R
Sbjct: 662 EQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDVTEAVIVKAVECMTILCKSGFFR 721
Query: 780 KRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 839
KRILL+MIERAFPLLCYPS+WVRRSVV+FIAASSE+LGAVDSYVFLAPVIRPFLR QP S
Sbjct: 722 KRILLQMIERAFPLLCYPSEWVRRSVVSFIAASSENLGAVDSYVFLAPVIRPFLRTQPVS 781
Query: 840 LASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGA 899
LAS KALLSCLKPPVSR+VFY+VLEN+RSSDMLERQRKIWY +SSQSK E DLLK+G
Sbjct: 782 LASEKALLSCLKPPVSRQVFYEVLENSRSSDMLERQRKIWY-SSSQSKLWEM-DLLKKGI 839
Query: 900 EDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRD 959
++L S+K W DKQQ + G +QP D + AKLR +G+ ++N S+ RD
Sbjct: 840 DELDSLKNWTDKQQGPGVQQTVGTAFQQPGITDCDKAE-AKLRDMGAFMHNDSNTVGHRD 898
Query: 960 PLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSL 1019
C EKL FSGFMS SG+NSL +K SEGIPLYSFS+D+R MG ASD L +NSL
Sbjct: 899 TQCSEKLQFSGFMSPHFSGMNSLTYEKPSEGIPLYSFSVDRRGMGIPSAASDPPLPMNSL 958
Query: 1020 GIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASV 1079
G+ SS MPW++ ++SF+LA+SVP P L SGS+SISNGSKQF+RVVHEP+ REN + A V
Sbjct: 959 GVSSSAMPWVNPLSKSFNLANSVPAPKLFSGSYSISNGSKQFHRVVHEPDAREN-ETAYV 1017
Query: 1080 NCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHC 1139
N F ++G S KG+SI +EDA++ DL+G PSF R +SIPDSGWRPRG+LVAHLQEH
Sbjct: 1018 NNTFQDVGLSANIKGTSIALEDATAQTDLSGFPSFAR-ASIPDSGWRPRGVLVAHLQEHR 1076
Query: 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199
SAVN+IAIS DHSFFVSASDDSTVK+WDSRKLEKDISFRS+LTYH+EGSR LC ML S
Sbjct: 1077 SAVNDIAISADHSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHMEGSRVLCATMLPGS 1136
Query: 1200 AQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1258
AQV++GA DG IHMFSVDHISRGLGN VEKYSGI+DI KKD KEGAI+ L+N DN
Sbjct: 1137 AQVIIGASDGFIHMFSVDHISRGLGNVVEKYSGIADITKKDIKEGAILNLLNCPVDN--- 1193
Query: 1259 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
+ MYSTQNCGIHLWDTRSNSNTWTL+A P+EGY SSL +GPCGNWFVSGSSRGV+TLWD
Sbjct: 1194 YTIMYSTQNCGIHLWDTRSNSNTWTLQATPKEGYASSLASGPCGNWFVSGSSRGVITLWD 1253
Query: 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378
LRFL+PVNSWQYS CPIEKMCLF+PP NA+VS+ ARPL+YVAAGCNE+SLWNAEN SCH
Sbjct: 1254 LRFLIPVNSWQYSLACPIEKMCLFLPPSNASVSSAARPLVYVAAGCNEISLWNAENASCH 1313
Query: 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438
QVLR NYD D EMSDLPWA ARPSS+ ++DLRRN N+KY VDELNEPPPRL GIRSL
Sbjct: 1314 QVLRMTNYDSDAEMSDLPWALARPSSKPTSQSDLRRNGNRKYGVDELNEPPPRLPGIRSL 1373
Query: 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498
LPLPGGDLLTGGTDLKIRRWDH SP RSYCICGPNLKG+GND+FYET+SS GVQVVQE K
Sbjct: 1374 LPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNLKGIGNDDFYETKSSFGVQVVQETK 1433
Query: 1499 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553
R+PLT KLTAKA+LAAAATDSAGCHRDSI+SL S+KLNQRLL+SS RDGAIKVWK
Sbjct: 1434 RRPLTIKLTAKAILAAAATDSAGCHRDSIVSLASIKLNQRLLLSSGRDGAIKVWK 1488
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449435788|ref|XP_004135676.1| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2237 bits (5797), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1122/1555 (72%), Positives = 1262/1555 (81%), Gaps = 112/1555 (7%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRG 60
MGNKIA+TTQ S TE+YLHDLPSSYNLVLKEVL RF KSILCKHDEGLVLVKVYFKRG
Sbjct: 1 MGNKIARTTQVSDTEFYLHDLPSSYNLVLKEVLARGRFLKSILCKHDEGLVLVKVYFKRG 60
Query: 61 DYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF 120
D IDL+EYERRL I+E F ++ HPHVW FQ WQETDKAAY+LRQYFFN+L DRLST PF
Sbjct: 61 DSIDLKEYERRLSQIKEIFLALPHPHVWPFQIWQETDKAAYVLRQYFFNNLHDRLSTRPF 120
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180
LS++EKKWLAFQLLLAVKQ HEKGICHGDIKCENVLVTSWNWLYL+DFASFKPTYIPYDD
Sbjct: 121 LSVIEKKWLAFQLLLAVKQSHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD 180
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
PSDF F++D+GG+RL YLAPERFYEHGGE+Q A DAPL+PSMDIF+VGCVIAELFLE P
Sbjct: 181 PSDFYFYYDSGGRRLGYLAPERFYEHGGELQDAHDAPLRPSMDIFSVGCVIAELFLEGQP 240
Query: 240 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299
FE L++YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELR SAE+YLQ+YA VVFP
Sbjct: 241 LFERQQLISYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRLSAENYLQDYANVVFP 300
Query: 300 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVK 359
YFSPFLHNFYCCWNPLHSD RVA+C+ VFP+IL+QM S G+ G+P+ S
Sbjct: 301 NYFSPFLHNFYCCWNPLHSDTRVALCQKVFPKILEQMTSCGSGL-TGTEKGSPTNNTS-G 358
Query: 360 ESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPE 419
SQ+ TKQN NL + E EKG +++F LLGD+ TL D K++N CS + + E
Sbjct: 359 LSQDMNTKQNENLTRL-----ESTEKGLPRDQFELLGDVDTLFRDVKQNNYCSGSEQLLE 413
Query: 420 DVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTF 479
D ++++ N +S GEL SIS+AFRKN HPFL+KITM+NLSSLMS YDSQSDTF
Sbjct: 414 DAA----TKNITNCVDQSPGELFHSISNAFRKNDHPFLQKITMSNLSSLMSSYDSQSDTF 469
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
GMPFLPLPEDSMKCEG+VLIASLLCSC+RNVKLPH RRAAILLL+SS+L+IDDEDRLQRV
Sbjct: 470 GMPFLPLPEDSMKCEGMVLIASLLCSCIRNVKLPHLRRAAILLLRSSALYIDDEDRLQRV 529
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
LP+VIAMLSD AAIVRCAALETLCDILPLVR+FPPSDAKIFPEYILPMLSM+PDDPEESV
Sbjct: 530 LPYVIAMLSDSAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMIPDDPEESV 589
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
RICYASNIAKLALTAYGFL+HS+ EAGVLDKLS P K + S+ETS QL +L+ DVQL
Sbjct: 590 RICYASNIAKLALTAYGFLIHSMSFREAGVLDKLSIPQKPSAPSSETSGQLGKLHGDVQL 649
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRD 719
+QLRKSIAEVVQELVMGPKQTP IRRALL+DIGNLC FFGQRQSNDFLLPILPAFLNDRD
Sbjct: 650 AQLRKSIAEVVQELVMGPKQTPCIRRALLKDIGNLCCFFGQRQSNDFLLPILPAFLNDRD 709
Query: 720 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 779
EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQ+L D EAVIVN LDCLAILCK G+LR
Sbjct: 710 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQSLKDTAEAVIVNGLDCLAILCKRGFLR 769
Query: 780 KRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 839
KRILLEMIE AFPLLCYPSQWVRRS TFIAASSE LGAVDSYVFLAPVIRPFLRRQP S
Sbjct: 770 KRILLEMIEHAFPLLCYPSQWVRRSAATFIAASSERLGAVDSYVFLAPVIRPFLRRQPTS 829
Query: 840 LASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGA 899
LAS KALL CLKPP+SREV+Y++LE ARSSDMLERQRKIWY++S QS ++ D LK+G
Sbjct: 830 LASEKALLCCLKPPISREVYYEILEKARSSDMLERQRKIWYSSSPQSVNWDSIDFLKKGM 889
Query: 900 EDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRD 959
+L+ +K WP K Q
Sbjct: 890 GELNLMKNWPSKPQ---------------------------------------------- 903
Query: 960 PLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSL 1019
+KL SGF+S QVSG++S DK+S+GIPLYSFS+DKR G VASDS L++NSL
Sbjct: 904 ----KKLQLSGFISPQVSGISSFVLDKTSDGIPLYSFSLDKRDTGFHSVASDSPLELNSL 959
Query: 1020 GIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASV 1079
E + RE+DQ + +
Sbjct: 960 -----------------------------------------------EFDSRESDQTSYI 972
Query: 1080 NCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHC 1139
+ KF EMG+S T KG+S EDA S DLT PSF R S+IPDSGW+PRG+LVAHLQEH
Sbjct: 973 SSKFQEMGSSSTLKGNSSMTEDAPSTNDLTTSPSFTRASAIPDSGWKPRGVLVAHLQEHH 1032
Query: 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199
SAVN+IA+S DHSFFVSAS+DSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC MLR S
Sbjct: 1033 SAVNDIAVSTDHSFFVSASEDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCATMLRGS 1092
Query: 1200 AQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1258
AQVVVG+CDG+IHMFSVD+ S+GLGN EKYSG++DIKKKD EGAI+T++NY+TD +S
Sbjct: 1093 AQVVVGSCDGLIHMFSVDYFSKGLGNAAEKYSGLADIKKKDINEGAIITMLNYSTD--SS 1150
Query: 1259 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
M MYSTQNCGIHLWDTR+N N +TLK+ PEEGYVSSL+ GPCGNWFVSGSSRGVLTLWD
Sbjct: 1151 QMVMYSTQNCGIHLWDTRTNVNVFTLKSTPEEGYVSSLLAGPCGNWFVSGSSRGVLTLWD 1210
Query: 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378
LRFLVPVNSW+YS +CPIE+MCLFV PPN +V+T ARPLIYV+AGCNEVSLWNAEN SCH
Sbjct: 1211 LRFLVPVNSWKYSVLCPIERMCLFVHPPNTSVATAARPLIYVSAGCNEVSLWNAENWSCH 1270
Query: 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438
Q+LR A+YD +TEMSDLPWA RPS++ NP DLRRNVN KY+VDELNEPPPRL GIRSL
Sbjct: 1271 QILRVASYDNETEMSDLPWALTRPSTKGNPIQDLRRNVNPKYKVDELNEPPPRLPGIRSL 1330
Query: 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498
LPLPGGDLLTGGTDL+IRRW+H SP R+YC+CGPN+KG+GN++FYETRSS GVQVVQE +
Sbjct: 1331 LPLPGGDLLTGGTDLRIRRWNHYSPDRTYCVCGPNVKGIGNEDFYETRSSFGVQVVQETR 1390
Query: 1499 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553
R+PL++KLT KA+LAAAATDSAGCHRDSILSL SVKLNQRLL+S SRDGAIKVWK
Sbjct: 1391 RRPLSTKLTTKAILAAAATDSAGCHRDSILSLASVKLNQRLLLSGSRDGAIKVWK 1445
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449489804|ref|XP_004158421.1| PREDICTED: LOW QUALITY PROTEIN: phosphoinositide 3-kinase regulatory subunit 4-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 2232 bits (5785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1120/1555 (72%), Positives = 1261/1555 (81%), Gaps = 112/1555 (7%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRG 60
MGNKIA+TTQ S TE+YLHDLPSSYNLVLKEVL RF KSILCKHDEGLVLVKVYFKRG
Sbjct: 1 MGNKIARTTQVSDTEFYLHDLPSSYNLVLKEVLARGRFLKSILCKHDEGLVLVKVYFKRG 60
Query: 61 DYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF 120
D IDL+EYERRL I+E F ++ HPHVW FQ WQETDKAAY+LRQYFFN+L DRLST PF
Sbjct: 61 DSIDLKEYERRLSQIKEIFLALPHPHVWPFQIWQETDKAAYVLRQYFFNNLHDRLSTRPF 120
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180
LS++EKKWLAFQLLLAVKQ HEKGICHGDIKCENVLVTSWNWLYL+DFASFKPTYIPYDD
Sbjct: 121 LSVIEKKWLAFQLLLAVKQSHEKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD 180
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
PSDF F++D+GG+RL YLAPERFYEHGGE+Q+ DAPL+PSMDIF+VGCVIAELFLE P
Sbjct: 181 PSDFYFYYDSGGRRLGYLAPERFYEHGGELQMQHDAPLRPSMDIFSVGCVIAELFLEGQP 240
Query: 240 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299
FE L++YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELR SAE+YLQ+YA VVFP
Sbjct: 241 LFERQQLISYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRLSAENYLQDYANVVFP 300
Query: 300 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVK 359
YFSPFLHNFYCCWNPLHSD RVA+C+ VFP+IL+QM S G+ G+P+ S
Sbjct: 301 NYFSPFLHNFYCCWNPLHSDTRVALCQKVFPKILEQMTSCGSGL-TGTEKGSPTNNTS-G 358
Query: 360 ESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPE 419
SQ+ TKQN NL + E EKG +++F LLGD+ TL D K++N CS + + E
Sbjct: 359 LSQDMNTKQNENLTRL-----ESTEKGLPRDQFELLGDVDTLFRDVKQNNYCSGSEQLLE 413
Query: 420 DVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTF 479
D ++++ N +S GEL SIS+AFRKN HPFL+KITM+NLSSLMS YDSQSDTF
Sbjct: 414 DAA----TKNITNCVDQSPGELFHSISNAFRKNDHPFLQKITMSNLSSLMSSYDSQSDTF 469
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
GMPFLPLPEDSMKCEG+VLIASLLCSC+RNVKLPH RRAAILLL+SS+L+IDDEDRLQRV
Sbjct: 470 GMPFLPLPEDSMKCEGMVLIASLLCSCIRNVKLPHLRRAAILLLRSSALYIDDEDRLQRV 529
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
LP+VIAMLSD AAIVRCAALETLCDILPLVR+FPPSDAKIFPEYILPMLSM+PDDPEESV
Sbjct: 530 LPYVIAMLSDSAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMIPDDPEESV 589
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
RICYASNIAKLALTAYGFL+HS+ EAGVLDKLS P K + S+ETS QL +L+ DVQL
Sbjct: 590 RICYASNIAKLALTAYGFLIHSMSFREAGVLDKLSIPQKPSAPSSETSGQLGKLHGDVQL 649
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRD 719
+QLRKSIAEVVQELVMGPKQTP IRRALL+DIGNLC FFGQRQSNDFLLPILPAFLNDRD
Sbjct: 650 AQLRKSIAEVVQELVMGPKQTPCIRRALLKDIGNLCCFFGQRQSNDFLLPILPAFLNDRD 709
Query: 720 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 779
EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQ+L D EAVIVN LDCLAILCK G+LR
Sbjct: 710 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQSLKDTAEAVIVNGLDCLAILCKRGFLR 769
Query: 780 KRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 839
KRILLEMIE AFPLLCYPSQWVRRS TFIAASSE LGAVDSYVFLAPVIRPFLRRQP S
Sbjct: 770 KRILLEMIEHAFPLLCYPSQWVRRSAATFIAASSERLGAVDSYVFLAPVIRPFLRRQPTS 829
Query: 840 LASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGA 899
LAS KALL CLKPP+SREV+Y++LE ARSSDMLERQRKIWY++S QS ++ D LK+G
Sbjct: 830 LASEKALLCCLKPPISREVYYEILEKARSSDMLERQRKIWYSSSPQSVNWDSIDFLKKGM 889
Query: 900 EDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRD 959
+L+ +K WP K Q
Sbjct: 890 GELNLMKNWPSKPQ---------------------------------------------- 903
Query: 960 PLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSL 1019
+KL SGF+S QVSG++S DK+S+GIPLYSFS+DKR G VASDS L++NSL
Sbjct: 904 ----KKLQLSGFISPQVSGISSFVLDKTSDGIPLYSFSLDKRDTGFHSVASDSPLELNSL 959
Query: 1020 GIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASV 1079
E + RE+DQ + +
Sbjct: 960 -----------------------------------------------EFDSRESDQTSYI 972
Query: 1080 NCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHC 1139
+ KF EMG+S T KG+S EDA S DLT PSF R S+IPDSGW+PRG+LVAHLQEH
Sbjct: 973 SSKFQEMGSSSTLKGNSSMTEDAPSTNDLTTSPSFTRASAIPDSGWKPRGVLVAHLQEHH 1032
Query: 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199
SAVN+IA+S DHS FVSAS+DSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC MLR S
Sbjct: 1033 SAVNDIAVSTDHSXFVSASEDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCATMLRGS 1092
Query: 1200 AQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1258
AQVVVG+CDG+IHMFSVD+ S+GLGN EKYSG++DIKKKD EGAI+T++NY+TD +S
Sbjct: 1093 AQVVVGSCDGLIHMFSVDYFSKGLGNAAEKYSGLADIKKKDINEGAIITMLNYSTD--SS 1150
Query: 1259 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
M MYSTQNCGIHLWDTR+N N +TLK+ PEEGYVSSL+ GPCGNWFVSGSSRGVLTLWD
Sbjct: 1151 QMVMYSTQNCGIHLWDTRTNVNVFTLKSTPEEGYVSSLLAGPCGNWFVSGSSRGVLTLWD 1210
Query: 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378
LRFLVPVNSW+YS +CPIE+MCLFV PPN +V+T ARPLIYV+AGCNEVSLWNAEN SCH
Sbjct: 1211 LRFLVPVNSWKYSVLCPIERMCLFVHPPNTSVATAARPLIYVSAGCNEVSLWNAENWSCH 1270
Query: 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438
Q+LR A+YD +TEMSDLPWA RPS++ NP DLRRNVN KY+VDELNEPPPRL GIRSL
Sbjct: 1271 QILRVASYDNETEMSDLPWALTRPSTKGNPIQDLRRNVNPKYKVDELNEPPPRLPGIRSL 1330
Query: 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498
LPLPGGDLLTGGTDL+IRRW+H SP R+YC+CGPN+KG+GN++FYETRSS GVQVVQE +
Sbjct: 1331 LPLPGGDLLTGGTDLRIRRWNHYSPDRTYCVCGPNVKGIGNEDFYETRSSFGVQVVQETR 1390
Query: 1499 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553
R+PL++KLT KA+LAAAATDSAGCHRDSILSL SVKLNQRLL+S SRDGAIKVWK
Sbjct: 1391 RRPLSTKLTTKAILAAAATDSAGCHRDSILSLASVKLNQRLLLSGSRDGAIKVWK 1445
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297803098|ref|XP_002869433.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297315269|gb|EFH45692.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 2217 bits (5746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1097/1555 (70%), Positives = 1271/1555 (81%), Gaps = 63/1555 (4%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRG 60
MGNKIA+TTQ SATEYYLHDLPSSYNLVLKEVLG RF KSI CKHDEGLV+VKVYFKRG
Sbjct: 1 MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFLKSIQCKHDEGLVVVKVYFKRG 60
Query: 61 DYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF 120
D IDLRE+ERRL I++ F S++HPHVW FQFWQETDKAAYL+RQYF+++L DRLST PF
Sbjct: 61 DSIDLREHERRLVKIKDVFLSLEHPHVWPFQFWQETDKAAYLVRQYFYSNLHDRLSTRPF 120
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180
LSLVEKKWLAFQLLLAVKQCHEK ICHGDIKCENVL+TSWNWLYL+DFASFKPTYIPYDD
Sbjct: 121 LSLVEKKWLAFQLLLAVKQCHEKDICHGDIKCENVLLTSWNWLYLADFASFKPTYIPYDD 180
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
PSDFSFFFDT G+RLCYLAPERFYEHGGE QVAQDAPLKPSMDIFAVGCVIAELFLE P
Sbjct: 181 PSDFSFFFDTRGQRLCYLAPERFYEHGGETQVAQDAPLKPSMDIFAVGCVIAELFLEGQP 240
Query: 240 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299
FEL+ LLAYRRGQ+DPSQHLEKIPD GIRKMILHMIQLEPE R SAE YLQNY VVFP
Sbjct: 241 LFELAQLLAYRRGQHDPSQHLEKIPDPGIRKMILHMIQLEPEARLSAEDYLQNYVGVVFP 300
Query: 300 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVK 359
YFSPFLH YCCWNPL SDMRVA C+ +F EILK+MM NK ++IG V P T+ V
Sbjct: 301 NYFSPFLHTLYCCWNPLPSDMRVATCQGIFQEILKKMMENKPGDEIG--VDPPVTSDPVN 358
Query: 360 ESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPE 419
S+ + T N L
Sbjct: 359 ASKVQETFANHKL----------------------------------------------- 371
Query: 420 DVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTF 479
NS S+DL ++V S E+L SISDA +KN HPFLKKITM++L +LMS YDS+SDT+
Sbjct: 372 ---NS--SKDLIRNTVNSKDEILYSISDALKKNRHPFLKKITMDDLGTLMSLYDSRSDTY 426
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
G PFLP+ E +M+CEG+VLIAS+LCSC+RN+KLPH RR AILLL+S SL+IDD+DRLQRV
Sbjct: 427 GTPFLPV-EGNMRCEGMVLIASMLCSCIRNIKLPHLRREAILLLRSCSLYIDDDDRLQRV 485
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
LP+V+A+LSDP AIVRCAA+ETLCDILPLVR+FPPSDAKIFPEYI PMLSMLP+D EESV
Sbjct: 486 LPYVVALLSDPTAIVRCAAMETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPEDTEESV 545
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
RICYASNIAKLALTAYGFL+HS +LS+ GVL++L++ SP+ ++ET LQ+ N + QL
Sbjct: 546 RICYASNIAKLALTAYGFLIHSFQLSDVGVLNELNSQQISPTPASETPSHLQKANGNAQL 605
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRD 719
+QLRK+IAEVVQELVMGPKQTP++RRALLQDIG LC FFGQRQSNDFLLPILPAFLNDRD
Sbjct: 606 AQLRKTIAEVVQELVMGPKQTPNVRRALLQDIGELCFFFGQRQSNDFLLPILPAFLNDRD 665
Query: 720 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 779
EQLR+VF+ +IVYVCFFVG+RSVEEYLLPYI+QALSD TEAVIVNAL+CL+ LCKS +LR
Sbjct: 666 EQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEAVIVNALECLSTLCKSSFLR 725
Query: 780 KRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 839
KR LL+MIE +PLLCYPSQWVRR+VVTFIAASSE LGAVDSY F+APVIRP+L R PAS
Sbjct: 726 KRALLQMIECVYPLLCYPSQWVRRAVVTFIAASSECLGAVDSYAFIAPVIRPYLSRLPAS 785
Query: 840 LASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGA 899
+AS + LLSCL PPV+REV Y++ E AR+ +++ +QRK+WY++S QSK ET DL +
Sbjct: 786 IASEEGLLSCLNPPVTREVVYRIFEKARNPEIMAKQRKMWYSSSPQSKDWETVDLFDKDT 845
Query: 900 EDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRD 959
+L+SI+C ++++S E + SKQ E AKLR + NAS+ ++RD
Sbjct: 846 GELNSIECGAEQKRSVEAQKQIKSASKQQEVQGKYAEKDAKLRIPRNPRPNASNTVELRD 905
Query: 960 PLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSL 1019
P+ PEKL FSGFM+ VSG+NS E IPLYSFSMDKRA N PVAS+S LQ+NSL
Sbjct: 906 PVYPEKLQFSGFMAPYVSGMNSF---IEPENIPLYSFSMDKRAATNPPVASESSLQMNSL 962
Query: 1020 GIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASV 1079
G+GS ++PWMD+ ++SF+LASSVP P L+SGSF + KQFYRVVHEPE RENDQ++S
Sbjct: 963 GMGSLSVPWMDSMSKSFNLASSVPVPKLISGSFHVGTNPKQFYRVVHEPESRENDQISSA 1022
Query: 1080 NCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHC 1139
KF ++G S ++K +S+ EDASSPADL G PS RT S+PDSGW+PRG+LVAHLQEH
Sbjct: 1023 ISKFQDLGVSSSSKSASVTSEDASSPADLVGEPSLSRT-SVPDSGWKPRGVLVAHLQEHR 1081
Query: 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199
SAVN+IA S DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSR +CT MLR+S
Sbjct: 1082 SAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGMCTTMLRNS 1141
Query: 1200 AQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1258
QVVVGA DG+IHMFS+DHISRGLGN VEKYSGI DIKKKD KEGA+V+L+NY D+ +
Sbjct: 1142 TQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVSLLNYTADSLSG 1201
Query: 1259 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
M MYSTQNCGIHLWDTRS+ + WTLKA PEEGYVSSLVT PCGNWFVSGSSRGVLTLWD
Sbjct: 1202 PMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTLWD 1261
Query: 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378
LRF V VNSW+Y +CPIEKMCL PP+ +VSTT +P IYVAAGCNEVSLWNAE G+CH
Sbjct: 1262 LRFRVRVNSWRYPIICPIEKMCLCFLPPSVSVSTTMKPFIYVAAGCNEVSLWNAEGGNCH 1321
Query: 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438
QVLR ANY+ +T++S+ W PS++ N K +LR+N++ KYR++ELNEPPPRL GIRSL
Sbjct: 1322 QVLRVANYENETDVSEFQWKL--PSNKVNSKPNLRQNMSSKYRIEELNEPPPRLPGIRSL 1379
Query: 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498
LPLPGGDL+TGGTDLKIRRWD+ SP RSYCICGP+LKGVGND+FYE ++++GVQ VQE K
Sbjct: 1380 LPLPGGDLVTGGTDLKIRRWDYSSPERSYCICGPSLKGVGNDDFYELKTNTGVQFVQETK 1439
Query: 1499 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553
R+PL +KLTAKAVLAAAATD+AGCHRDS+ SL SVKLNQRLLISSSRDGAIK+WK
Sbjct: 1440 RRPLATKLTAKAVLAAAATDTAGCHRDSVQSLASVKLNQRLLISSSRDGAIKIWK 1494
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15233564|ref|NP_194667.1| phosphoinositide-3-kinase, regulatory subunit 4, p150 [Arabidopsis thaliana] gi|7269836|emb|CAB79696.1| putative protein [Arabidopsis thaliana] gi|332660224|gb|AEE85624.1| phosphoinositide-3-kinase, regulatory subunit 4, p150 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 2206 bits (5716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1103/1555 (70%), Positives = 1271/1555 (81%), Gaps = 63/1555 (4%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRG 60
MGNKIA+TTQ SATEYYLHDLPSSYNLVLKEVLG RF KSI CKHDEGLV+VKVYFKRG
Sbjct: 1 MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFLKSIQCKHDEGLVVVKVYFKRG 60
Query: 61 DYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF 120
D IDLREYERRL I++ F S++HPHVW FQFWQETDKAAYL+RQYF+++L DRLST PF
Sbjct: 61 DSIDLREYERRLVKIKDVFLSLEHPHVWPFQFWQETDKAAYLVRQYFYSNLHDRLSTRPF 120
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180
LSLVEKKWLAFQLLLAVKQCHEK ICHGDIKCENVL+TSWNWLYL+DFASFKPTYIPYDD
Sbjct: 121 LSLVEKKWLAFQLLLAVKQCHEKDICHGDIKCENVLLTSWNWLYLADFASFKPTYIPYDD 180
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
PSDFSFFFDT G+RLCYLAPERFYEHGGE QVAQDAPLKPSMDIFAVGCVIAELFLE P
Sbjct: 181 PSDFSFFFDTRGQRLCYLAPERFYEHGGETQVAQDAPLKPSMDIFAVGCVIAELFLEGQP 240
Query: 240 FFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299
FEL+ LLAYRRGQ+DPSQHLEKIPD GIRKMILHMIQLEPE R SAE YLQNY VVFP
Sbjct: 241 LFELAQLLAYRRGQHDPSQHLEKIPDPGIRKMILHMIQLEPEARLSAEDYLQNYVGVVFP 300
Query: 300 TYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVK 359
YFSPFLH YCCWNPL SDMRVA C+ +F EILK+MM NKS ++IG V +P T+ +
Sbjct: 301 NYFSPFLHTLYCCWNPLPSDMRVATCQGIFQEILKKMMENKSGDEIG--VDSPVTSNPMN 358
Query: 360 ESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPE 419
S + T N L
Sbjct: 359 ASTVQETFANHKL----------------------------------------------- 371
Query: 420 DVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTF 479
NS S+DL ++V S E+ SISDA +KN HPFLKKITM++L +LMS YDS+SDT+
Sbjct: 372 ---NS--SKDLIRNTVNSKDEIFYSISDALKKNRHPFLKKITMDDLGTLMSLYDSRSDTY 426
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
G PFLP+ E +M+CEG+VLIAS+LCSC+RN+KLPH RR AILLL+S SL+IDD+DRLQRV
Sbjct: 427 GTPFLPV-EGNMRCEGMVLIASMLCSCIRNIKLPHLRREAILLLRSCSLYIDDDDRLQRV 485
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
LP+V+A+LSDP AIVRCAA+ETLCDILPLVR+FPPSDAKIFPEYI PMLSMLP+D EESV
Sbjct: 486 LPYVVALLSDPTAIVRCAAMETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPEDTEESV 545
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
RICYASNIAKLALTAYGFL+HS +LS+ GVL++L++ S + ++ET LQ+ N + QL
Sbjct: 546 RICYASNIAKLALTAYGFLIHSFQLSDVGVLNELNSQQISTTPASETPSHLQKANGNAQL 605
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRD 719
QLRK+IAEVVQELVMGPKQTP++RRALLQDIG LC FFGQRQSNDFLLPILPAFLNDRD
Sbjct: 606 QQLRKTIAEVVQELVMGPKQTPNVRRALLQDIGELCFFFGQRQSNDFLLPILPAFLNDRD 665
Query: 720 EQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLR 779
EQLR+VF+ +IVYVCFFVG+RSVEEYLLPYI+QALSD TEAVIVNAL+CL+ LCKS +LR
Sbjct: 666 EQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQALSDQTEAVIVNALECLSTLCKSSFLR 725
Query: 780 KRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPAS 839
KR LL+MIE +PLLCYPSQWVRR+VVTFIAASSE LGAVDSY F+APVIR +L R PAS
Sbjct: 726 KRALLQMIECVYPLLCYPSQWVRRAVVTFIAASSECLGAVDSYAFIAPVIRSYLSRLPAS 785
Query: 840 LASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETADLLKRGA 899
+AS + LLSCLKPPV+REV Y++ E R+ + + +QRK+WY++S QSK E+ DL + A
Sbjct: 786 IASEEGLLSCLKPPVTREVVYRIFEKTRNPEFMAKQRKMWYSSSPQSKDWESVDLFDKDA 845
Query: 900 EDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDNDGAKLRTLGSLVYNASSMADIRD 959
+L+S++C +++QS EG + SKQPE AKLR + NAS+ ++RD
Sbjct: 846 GELNSVECRAEQKQSVEGKKQIKSASKQPEVQGKYAEKDAKLRIPRNPRPNASNTVELRD 905
Query: 960 PLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSL 1019
P+ PEKL FSGFM+ VSG NS E IPLYSFSMDKRA N PVAS+S LQ+NSL
Sbjct: 906 PVYPEKLQFSGFMAPYVSGANSF---IEPENIPLYSFSMDKRAATNPPVASESSLQMNSL 962
Query: 1020 GIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPEGRENDQMASV 1079
G+GS ++PWMD+ ++SF+LASSVP P L+SGSF + KQFYRVVHEPE RENDQ++S
Sbjct: 963 GMGSLSVPWMDSMSKSFNLASSVPVPKLISGSFHVGTNPKQFYRVVHEPESRENDQISSA 1022
Query: 1080 NCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHC 1139
KF ++G S ++K +S+ EDASSPADL G PS RT S+PDSGW+PRG+LVAHLQEH
Sbjct: 1023 ISKFQDLGVSSSSKSASVTSEDASSPADLVGEPSLSRT-SVPDSGWKPRGVLVAHLQEHR 1081
Query: 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199
SAVN+IA S DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSR +CT MLR+S
Sbjct: 1082 SAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGMCTTMLRNS 1141
Query: 1200 AQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISDIKKKDTKEGAIVTLVNYNTDNCAS 1258
QVVVGA DG+IHMFS+DHISRGLGN VEKYSGI DIKKKD KEGA+V+L+NY D+ +
Sbjct: 1142 TQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGIVDIKKKDVKEGALVSLLNYTADSLSG 1201
Query: 1259 HMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
M MYSTQNCGIHLWDTRS+ + WTLKA PEEGYVSSLVT PCGNWFVSGSSRGVLTLWD
Sbjct: 1202 PMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGYVSSLVTSPCGNWFVSGSSRGVLTLWD 1261
Query: 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378
LRF VPVNSWQY +CPIEKMCL PP+ +VSTT +PLIYVAAGCNEVSLWNAE GSCH
Sbjct: 1262 LRFRVPVNSWQYPIICPIEKMCLCFLPPSVSVSTTMKPLIYVAAGCNEVSLWNAEGGSCH 1321
Query: 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438
QVLR ANY+ +T++S+ W PS++ NPK + R+N++ KYR++ELNEPPPRL GIRSL
Sbjct: 1322 QVLRVANYENETDVSEFQWKL--PSNKVNPKPNHRQNMSSKYRIEELNEPPPRLPGIRSL 1379
Query: 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498
LPLPGGDLLTGGTDLKIRRWD+ SP RSYCICGP+LKGVGND+FYE ++++GVQ VQE K
Sbjct: 1380 LPLPGGDLLTGGTDLKIRRWDYSSPERSYCICGPSLKGVGNDDFYELKTNTGVQFVQETK 1439
Query: 1499 RQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553
R+PL +KLTAKAVLAAAATD+AGCHRDS+ SL SVKLNQRLLISSSRDGAIKVWK
Sbjct: 1440 RRPLATKLTAKAVLAAAATDTAGCHRDSVQSLASVKLNQRLLISSSRDGAIKVWK 1494
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224088049|ref|XP_002308305.1| predicted protein [Populus trichocarpa] gi|222854281|gb|EEE91828.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1849 bits (4789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 921/1219 (75%), Positives = 1031/1219 (84%), Gaps = 11/1219 (0%)
Query: 336 MMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLL 395
MMG+++SE G+ + +++ K S+E V KQNL+ + + RE +E G ++ LL
Sbjct: 1 MMGSRTSEVAGTRRDVFANSLNGKLSEEMVEKQNLD-STSHWRNRERIENGLTCQQYNLL 59
Query: 396 GDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHP 455
GDI++L+GD K+S+ + K MPE P S F QDL+ S +S ELLQ+IS+AFR+N HP
Sbjct: 60 GDINSLLGDVKQSSGYYSAKLMPESAPGSEFCQDLKQCSTKSPDELLQTISNAFRRNDHP 119
Query: 456 FLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHY 515
FLKKIT+++LSSLMSEYDSQSDTFGMPFLPLPEDSMKCEG+VLIASLLCSC+RNVKLPH
Sbjct: 120 FLKKITVDDLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGMVLIASLLCSCIRNVKLPHL 179
Query: 516 RRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPS 575
RR AILLLKS SL+IDDEDRLQRVLP+VIAMLSDPAAIVR AALETLCDILPLVR+FPPS
Sbjct: 180 RRGAILLLKSCSLYIDDEDRLQRVLPYVIAMLSDPAAIVRSAALETLCDILPLVRDFPPS 239
Query: 576 DAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSA 635
DAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFL+HSI LS+AGVLD++S+
Sbjct: 240 DAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSIGLSKAGVLDEMSS 299
Query: 636 PHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLC 695
P S +S E QLQR+N D QLSQLRKSIAEVVQELVMGPKQTP+IRRALLQDIGNLC
Sbjct: 300 PQNSMASFIERPGQLQRVNNDAQLSQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGNLC 359
Query: 696 SFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALS 755
FFG RQSNDFLLPILPAFLNDRDEQLRA+FY +IVYVCFFVG+RSVEEYLLPYI+QALS
Sbjct: 360 CFFGHRQSNDFLLPILPAFLNDRDEQLRALFYSKIVYVCFFVGQRSVEEYLLPYIDQALS 419
Query: 756 DATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSES 815
D TE VIVNALDCLAILCK G+LRKR+LLEMIERAFPLLCYPSQWVRRS V+FIAASSES
Sbjct: 420 DQTEVVIVNALDCLAILCKRGFLRKRVLLEMIERAFPLLCYPSQWVRRSAVSFIAASSES 479
Query: 816 LGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSSDMLERQ 875
LGAVDSYVFLAPVIRPFL R PASLAS K+LL CL PPVSR+VFY LENARSSDMLERQ
Sbjct: 480 LGAVDSYVFLAPVIRPFLCRHPASLASEKSLLLCLVPPVSRQVFYHDLENARSSDMLERQ 539
Query: 876 RKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDD 935
RKIWYN+S+QSKQ E DLLK ++ +S+K WP+K+ S D +QPE D
Sbjct: 540 RKIWYNSSAQSKQWEPEDLLKGDDKEPNSMKSWPEKEPSPGDQNHDADRLEQPE-----D 594
Query: 936 NDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYS 995
D AKL +G + NASS DIRD L EKL FSG MS Q SGVNS DKSSEGIPLYS
Sbjct: 595 GD-AKLIAMG-FIANASSKVDIRDALSSEKLQFSGCMSPQFSGVNSFLHDKSSEGIPLYS 652
Query: 996 FSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSIS 1055
FSMD+RA+ P SDS LQ+NSL I SS MPW+D +SFSLASSVP P LVSGSFSI+
Sbjct: 653 FSMDRRAVKFPPATSDSSLQMNSLAISSSYMPWVDHGIKSFSLASSVPAPKLVSGSFSIT 712
Query: 1056 NGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFV 1115
NGSK FYRVVHEPE REN+Q + N K+ ++G GT+KGSS VEDA P DLTGLP F
Sbjct: 713 NGSKPFYRVVHEPESRENEQTSFFNGKYQDVGLYGTSKGSSFTVEDA-PPTDLTGLPLFA 771
Query: 1116 RTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI 1175
RT+SIPDSGW+PRG+LVAHLQEH SA+N+IA+S DHS FVSASDDST+KVWDSRKLEKDI
Sbjct: 772 RTASIPDSGWKPRGVLVAHLQEHRSAINDIAVSSDHSVFVSASDDSTIKVWDSRKLEKDI 831
Query: 1176 SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGN-VEKYSGISD 1234
SFRSRLTYHLEGSRALCT+ML + AQVVVGACDG IHMFSV+H+SRGLGN VEKYSGI+D
Sbjct: 832 SFRSRLTYHLEGSRALCTVMLHNIAQVVVGACDGTIHMFSVEHMSRGLGNVVEKYSGIAD 891
Query: 1235 IKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1294
IKKKD KEGAI++L+NY +DN MYSTQNCGIHLWD R+NSN WTLKA+PEEGY+S
Sbjct: 892 IKKKDIKEGAILSLLNYTSDNSDGQSVMYSTQNCGIHLWDIRANSNAWTLKAVPEEGYIS 951
Query: 1295 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTA 1354
SLVTGPCGNWFVSGSSRGVLTLWDLRFL+PVNSW+YS VCP+EKMCLFVPPPN V++TA
Sbjct: 952 SLVTGPCGNWFVSGSSRGVLTLWDLRFLIPVNSWKYSHVCPVEKMCLFVPPPNVTVTSTA 1011
Query: 1355 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRR 1414
RPLIYVAAG NEVSLWNAE GSCHQV+R ANYD + EMSD+PWA ARPSS++N K D+RR
Sbjct: 1012 RPLIYVAAGSNEVSLWNAETGSCHQVMRVANYDNE-EMSDIPWALARPSSKTNLKLDVRR 1070
Query: 1415 NVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNL 1474
NV KYRV+ELNEPPPR GIR++LPLPGGDLLTGGTDLKIRRWDH SP RSYCI GPNL
Sbjct: 1071 NVKPKYRVEELNEPPPRFPGIRAMLPLPGGDLLTGGTDLKIRRWDHFSPDRSYCISGPNL 1130
Query: 1475 KGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1534
G GND YETRSS GVQ+VQE KR+ LT+KLTAK VLAAAATDSAGCHRDSILSL SVK
Sbjct: 1131 NGAGNDNPYETRSSFGVQIVQETKRRHLTAKLTAKQVLAAAATDSAGCHRDSILSLASVK 1190
Query: 1535 LNQRLLISSSRDGAIKVWK 1553
LNQRLLISSSRDGAIKVWK
Sbjct: 1191 LNQRLLISSSRDGAIKVWK 1209
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357137425|ref|XP_003570301.1| PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 1584 bits (4101), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 846/1566 (54%), Positives = 1091/1566 (69%), Gaps = 129/1566 (8%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKR- 59
MGNKIA+TTQASATEYYLHDLPS+YNLVL +V+ RF KS+LCKHDEGL+LVKVYFKR
Sbjct: 1 MGNKIARTTQASATEYYLHDLPSTYNLVLLDVVSRGRFLKSVLCKHDEGLLLVKVYFKRA 60
Query: 60 GDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPP 119
G+ +DL+E+ERRL IR F+ ++ HVW FQ W +TDKAAYLLRQYF+++L DRLST P
Sbjct: 61 GEPLDLKEHERRLERIRNAFQGLEGSHVWPFQVWFQTDKAAYLLRQYFYSNLHDRLSTRP 120
Query: 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179
FLS +EKKWLAFQL+ AV+Q H KG+CHGDIKCENVLVTSWNWLYL+DFASFKPTYIP +
Sbjct: 121 FLSQIEKKWLAFQLIHAVEQSHSKGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDN 180
Query: 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-V 238
DPSDFSFFFDTGG+R CYLAPERF+EHGGE QV+ DAPL+PSMDIF+VGCV+AELFLE
Sbjct: 181 DPSDFSFFFDTGGRRRCYLAPERFHEHGGESQVSADAPLQPSMDIFSVGCVLAELFLEGQ 240
Query: 239 PFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVF 298
P FELS LLAYRRGQYDP LEKI D+ I+ M+LHMIQL+P+ R S +SYLQ Y VVF
Sbjct: 241 PLFELSQLLAYRRGQYDPLHTLEKIQDADIQDMVLHMIQLDPKERLSCKSYLQKYETVVF 300
Query: 299 PTYFSPFLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSV 358
PTYFS FLH F+ PL SD RV + F I M+ +SE I V
Sbjct: 301 PTYFSRFLHKFFSDIVPLDSDARVEKTQENFERIHDMMISGSTSEHI-----------QV 349
Query: 359 KESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMP 418
E ++ + Q +N + + ++K ++ +++GD+++L+ + ++ N ++ K M
Sbjct: 350 SE-KKGIGGQVINSPRESSKGTSSVKKNIPRDHRQIVGDLNSLLKEVEQRNNHADSKAM- 407
Query: 419 EDVPNSTFSQDLRNSSVESSGELLQSISDAFR-----KNGHPFLKKITMNNLSSLMSEYD 473
+ + S R + +E S ++ ++ R N + KI+ +NL +L+S YD
Sbjct: 408 KYTDSYAASNVSRANGIEPSPQVNETRIQTARVLAGQNNDVSHVHKISKSNLPALVSTYD 467
Query: 474 SQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDE 533
QSDT+ + CEG+VL+ASLLCSC+R+VK P RRA+++LLK SS +IDD+
Sbjct: 468 VQSDTYSFDIFQQIHTKVSCEGMVLLASLLCSCIRSVKKPELRRASLILLKISSTYIDDD 527
Query: 534 DRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPD 593
RLQ V+P+VIAMLSDPAAIVRCAALETL D+L LV++FP SDA IFPEYILPMLS+LPD
Sbjct: 528 SRLQLVIPYVIAMLSDPAAIVRCAALETLSDVLCLVQDFPISDAMIFPEYILPMLSLLPD 587
Query: 594 DPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRL 653
D EESVR+CYASNI KLALTAY FL+HS +++ G LDK + S S E+ + Q+
Sbjct: 588 DTEESVRVCYASNIYKLALTAYRFLLHSRSIADTGPLDKSMV--AAVSQSAESPAKKQQD 645
Query: 654 NADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPA 713
QL++LR+ I ++VQELVMGPKQTP++RRALLQDIG LC FFG RQSNDFLLPILPA
Sbjct: 646 KIHRQLARLRRCIYDIVQELVMGPKQTPNVRRALLQDIGYLCYFFGHRQSNDFLLPILPA 705
Query: 714 FLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILC 773
FLND DEQLRAV++GQIV VC+F+G RSVEEYLLPY+EQALSD EAV+VN LDCL ++C
Sbjct: 706 FLNDHDEQLRAVYFGQIVVVCYFIGPRSVEEYLLPYLEQALSDDMEAVVVNVLDCLTMMC 765
Query: 774 KSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFL 833
SGYLRKRI++ + +A PLLC+P QWV+RS V IAA SESLG VD+YV+L+P +R FL
Sbjct: 766 GSGYLRKRIIVGLFGKALPLLCHPIQWVKRSAVRLIAACSESLGPVDTYVYLSPHLRQFL 825
Query: 834 RRQPASLASVKALLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQSKQQETAD 893
R+P S++ ALL+CLKPPVS+ V YQ LE A+ +T D
Sbjct: 826 HREPPSISEA-ALLACLKPPVSKSVLYQALEVAK----------------------DTGD 862
Query: 894 LLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDD----NDGAKLRTLGSLVY 949
++ +G K+Q+ G R P AQS D A+LR+
Sbjct: 863 VVLKGGG---------KKEQTVHGGR-------YPATAQSGSLAALEDAARLRSSNL--- 903
Query: 950 NASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVA 1009
+++ DI+D + +K L+ G+ +Q S NS D S+GIP YS DKR
Sbjct: 904 SSNVSLDIKDSISSDKSLYYGY-AQHASAGNSSFYDGLSKGIPSYSVCTDKR-------- 954
Query: 1010 SDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFSISNGSKQFYRVVHEPE 1069
G+G MPW +N+ L++S V +
Sbjct: 955 ----------GLGEIFMPW--ESNRHPGLSTS-----------------------VQGLQ 979
Query: 1070 GRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRG 1129
REN F S + K SS D+ S + G PSF+R++ + ++GW+PRG
Sbjct: 980 TREN--------HFSSKHISESMKSSSSVPGDSVSNPETAGTPSFIRSAVVLETGWKPRG 1031
Query: 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSR 1189
+LVAHLQEH +VN+IA+S D++FFV+ASDDS++K+WD+RKLEKDI+FRSRLTY L SR
Sbjct: 1032 VLVAHLQEHRMSVNDIAVSDDNAFFVTASDDSSIKIWDTRKLEKDIAFRSRLTYSLGSSR 1091
Query: 1190 ALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNV-EKYSGISDIKKKDTKEGAIVTL 1248
ALCT ML S+QV+VG DG +H+FSVD +RG+G++ ++YSG+ ++ +KD KEGAI+++
Sbjct: 1092 ALCTTMLYGSSQVIVGDSDGTLHLFSVD-CARGVGSITDRYSGLVNVNRKDLKEGAILSV 1150
Query: 1249 VNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSG 1308
+N ++D+ S ++ST++C IH WDTR+NS +W+ K+ PEEGY+S+LV G CGNWF+SG
Sbjct: 1151 INCSSDS-FSPTILFSTEHCDIHKWDTRTNSESWSFKSSPEEGYISALVVGQCGNWFISG 1209
Query: 1309 SSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368
SSRGVLTLWD RFL+PVNSW YS V PIE++CL +PP N ++S+ RPL++VAAGCNEVS
Sbjct: 1210 SSRGVLTLWDHRFLLPVNSWNYSTVSPIERLCLLIPPQN-SISSAGRPLVFVAAGCNEVS 1268
Query: 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEP 1428
LWNAENGSCHQ+ RTA+ + + M P RP +++ K D+RR + KYR++EL +P
Sbjct: 1269 LWNAENGSCHQMFRTASTENEAGMPKTPL---RPINKTVTK-DVRRAGSYKYRIEELADP 1324
Query: 1429 PPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSS 1488
PRL GIR LLPLPGGDLLTGGTDLKIR WD P +S+C+ GP+ KGVGNDE Y+ +SS
Sbjct: 1325 HPRLPGIRCLLPLPGGDLLTGGTDLKIRYWDQARPEQSFCVAGPSAKGVGNDECYDIKSS 1384
Query: 1489 SGVQVVQERKRQPLT-SKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDG 1547
GVQVVQE + P + S+LT K LA AA DSAGCHRD+IL+L SV L+ + LIS+SRDG
Sbjct: 1385 FGVQVVQETCKPPTSASRLTHKTQLAMAAADSAGCHRDAILALASVNLSNQRLISASRDG 1444
Query: 1548 AIKVWK 1553
A+KVWK
Sbjct: 1445 AVKVWK 1450
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1553 | ||||||
| TAIR|locus:2118234 | 1494 | VPS15 "vacuolar protein sortin | 0.735 | 0.764 | 0.671 | 0.0 | |
| DICTYBASE|DDB_G0282627 | 1966 | vps15 "VPS15 family protein ki | 0.231 | 0.183 | 0.431 | 1.3e-152 | |
| UNIPROTKB|E2QZF5 | 1358 | PIK3R4 "Uncharacterized protei | 0.238 | 0.272 | 0.339 | 1.9e-145 | |
| ZFIN|ZDB-GENE-050309-84 | 1386 | pik3r4 "phosphoinositide-3-kin | 0.194 | 0.217 | 0.437 | 1.5e-144 | |
| MGI|MGI:1922919 | 1358 | Pik3r4 "phosphatidylinositol 3 | 0.236 | 0.270 | 0.340 | 2.4e-144 | |
| RGD|1311809 | 1358 | Pik3r4 "phosphoinositide-3-kin | 0.238 | 0.272 | 0.336 | 1.1e-143 | |
| UNIPROTKB|Q99570 | 1358 | PIK3R4 "Phosphoinositide 3-kin | 0.238 | 0.272 | 0.336 | 2.2e-143 | |
| UNIPROTKB|A6QLW1 | 1358 | PIK3R4 "PIK3R4 protein" [Bos t | 0.243 | 0.278 | 0.335 | 3.1e-143 | |
| UNIPROTKB|Q5R9I3 | 1358 | PIK3R4 "Phosphoinositide 3-kin | 0.238 | 0.272 | 0.334 | 1.6e-141 | |
| UNIPROTKB|I3LEJ8 | 1354 | PIK3R4 "Uncharacterized protei | 0.245 | 0.281 | 0.326 | 9.3e-139 |
| TAIR|locus:2118234 VPS15 "vacuolar protein sorting 15" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4015 (1418.4 bits), Expect = 0., Sum P(2) = 0.
Identities = 780/1161 (67%), Positives = 923/1161 (79%)
Query: 403 GD--GKESNQCSNVKPMPEDVPNSTF-------SQDLRNSSVESSGELLQSISDAFRKNG 453
GD G +S SN PM TF S+DL ++V S E+ SISDA +KN
Sbjct: 343 GDEIGVDSPVTSN--PMNASTVQETFANHKLNSSKDLIRNTVNSKDEIFYSISDALKKNR 400
Query: 454 HPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLP 513
HPFLKKITM++L +LMS YDS+SDT+G PFLP+ E +M+CEG+VLIAS+LCSC+RN+KLP
Sbjct: 401 HPFLKKITMDDLGTLMSLYDSRSDTYGTPFLPV-EGNMRCEGMVLIASMLCSCIRNIKLP 459
Query: 514 HYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFP 573
H RR AILLL+S SL+IDD+DRLQRVLP+V+A+LSDP AIVRCAA+ETLCDILPLVR+FP
Sbjct: 460 HLRREAILLLRSCSLYIDDDDRLQRVLPYVVALLSDPTAIVRCAAMETLCDILPLVRDFP 519
Query: 574 PSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKL 633
PSDAKIFPEYI PMLSMLP+D EESVRICYASNIAKLALTAYGFL+HS +LS+ GVL++L
Sbjct: 520 PSDAKIFPEYIFPMLSMLPEDTEESVRICYASNIAKLALTAYGFLIHSFQLSDVGVLNEL 579
Query: 634 SAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGN 693
++ S + ++ET LQ+ N + QL QLRK+IAEVVQELVMGPKQTP++RRALLQDIG
Sbjct: 580 NSQQISTTPASETPSHLQKANGNAQLQQLRKTIAEVVQELVMGPKQTPNVRRALLQDIGE 639
Query: 694 LCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQA 753
LC FFGQRQSNDFLLPILPAFLNDRDEQLR+VF+ +IVYVCFFVG+RSVEEYLLPYI+QA
Sbjct: 640 LCFFFGQRQSNDFLLPILPAFLNDRDEQLRSVFFEKIVYVCFFVGQRSVEEYLLPYIDQA 699
Query: 754 LSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASS 813
LSD TEAVIVNAL+CL+ LCKS +LRKR LL+MIE +PLLCYPSQWVRR+VVTFIAASS
Sbjct: 700 LSDQTEAVIVNALECLSTLCKSSFLRKRALLQMIECVYPLLCYPSQWVRRAVVTFIAASS 759
Query: 814 ESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARSSDMLE 873
E LGAVDSY F+APVIR +L R PAS+AS + LLSCLKPPV+REV Y++ E R+ + +
Sbjct: 760 ECLGAVDSYAFIAPVIRSYLSRLPASIASEEGLLSCLKPPVTREVVYRIFEKTRNPEFMA 819
Query: 874 RQRKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQS 933
+QRK+WY++S QSK E+ DL + A +L+S++C +++QS EG + SKQPE
Sbjct: 820 KQRKMWYSSSPQSKDWESVDLFDKDAGELNSVECRAEQKQSVEGKKQIKSASKQPEVQGK 879
Query: 934 DDNDGAKLRTLGSLVYNASSMADIRDPLCPEKLLFSGFMSQQVSGVNSLRCDKSSEGIPL 993
AKLR + NAS+ ++RDP+ PEKL FSGFM+ VSG NS E IPL
Sbjct: 880 YAEKDAKLRIPRNPRPNASNTVELRDPVYPEKLQFSGFMAPYVSGANSFI---EPENIPL 936
Query: 994 YSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSFS 1053
YSFSMDKRA N PVAS+S LQ+NSLG+GS ++PWMD+ ++SF+LASSVP P L+SGSF
Sbjct: 937 YSFSMDKRAATNPPVASESSLQMNSLGMGSLSVPWMDSMSKSFNLASSVPVPKLISGSFH 996
Query: 1054 ISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLTGLPS 1113
+ KQFYRVVHEPE RENDQ++S KF ++G S ++K +S+ EDASSPADL G PS
Sbjct: 997 VGTNPKQFYRVVHEPESRENDQISSAISKFQDLGVSSSSKSASVTSEDASSPADLVGEPS 1056
Query: 1114 FVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEK 1173
RTS +PDSGW+PRG+LVAHLQEH SAVN+IA S DHSFFVSASDDSTVKVWDSRKLEK
Sbjct: 1057 LSRTS-VPDSGWKPRGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDSRKLEK 1115
Query: 1174 DISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNV-EKYSGI 1232
DISFRSRLTYHLEGSR +CT MLR+S QVVVGA DG+IHMFS+DHISRGLGNV EKYSGI
Sbjct: 1116 DISFRSRLTYHLEGSRGMCTTMLRNSTQVVVGASDGVIHMFSIDHISRGLGNVVEKYSGI 1175
Query: 1233 SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1292
DIKKKD KEGA+V+L+NY D+ + M MYSTQNCGIHLWDTRS+ + WTLKA PEEGY
Sbjct: 1176 VDIKKKDVKEGALVSLLNYTADSLSGPMVMYSTQNCGIHLWDTRSDLDAWTLKANPEEGY 1235
Query: 1293 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVST 1352
VSSLVT PCGNWFVSGSSRGVLTLWDLRF VPVNSWQY +CPIEKMCL PP+ +VST
Sbjct: 1236 VSSLVTSPCGNWFVSGSSRGVLTLWDLRFRVPVNSWQYPIICPIEKMCLCFLPPSVSVST 1295
Query: 1353 TARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDL 1412
T +PLIYVAAGCNEVSLWNAE GSCHQVLR ANY+ +T++S+ W PS++ NPK +
Sbjct: 1296 TMKPLIYVAAGCNEVSLWNAEGGSCHQVLRVANYENETDVSEFQWKL--PSNKVNPKPNH 1353
Query: 1413 RRNVNQKYRVDELNEPPPRLLGIRSXXXXXXXXXXXXXXXXKIRRWDHCSPGRSYCICGP 1472
R+N++ KYR++ELNEPPPRL GIRS KIRRWD+ SP RSYCICGP
Sbjct: 1354 RQNMSSKYRIEELNEPPPRLPGIRSLLPLPGGDLLTGGTDLKIRRWDYSSPERSYCICGP 1413
Query: 1473 NLKGVGNDEFYETRSSSGVQVVQERKRQPXXXXXXXXXXXXXXXXXXXGCHRDSILSLGS 1532
+LKGVGND+FYE ++++GVQ VQE KR+P GCHRDS+ SL S
Sbjct: 1414 SLKGVGNDDFYELKTNTGVQFVQETKRRPLATKLTAKAVLAAAATDTAGCHRDSVQSLAS 1473
Query: 1533 VKLNQRLLISSSRDGAIKVWK 1553
VKLNQRLLISSSRDGAIKVWK
Sbjct: 1474 VKLNQRLLISSSRDGAIKVWK 1494
|
|
| DICTYBASE|DDB_G0282627 vps15 "VPS15 family protein kinase Vps15" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 699 (251.1 bits), Expect = 1.3e-152, Sum P(6) = 1.3e-152
Identities = 168/389 (43%), Positives = 226/389 (58%)
Query: 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKH-DEGLVLVKVYFKR 59
MGN T A YL D +V K+ LG +RF K++ H +EG V+VK+Y KR
Sbjct: 1 MGN----TVGAPIVSEYLEDEIGP--IVFKKSLGNARFLKTVKAYHSEEGYVVVKIYKKR 54
Query: 60 GDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPP 119
L +Y+ L I++ F ++ +Q + ETD++ YL+RQYF N+L DRLST P
Sbjct: 55 NTKESLEKYKIMLKEIKDNFNITPSFNIMPYQHFIETDRSGYLIRQYFHNNLYDRLSTRP 114
Query: 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYX 179
FLS++EKK++AFQLL A++Q KG+ HGDIK ENVLVT+ NW+YLSDFA +KPT+IP
Sbjct: 115 FLSMIEKKFIAFQLLKALEQSSFKGVFHGDIKSENVLVTTSNWVYLSDFACYKPTFIPED 174
Query: 180 XXXXXXXXXXTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-V 238
T G+R CY+APERFYE + L P MDIF++GCVIAELFL+
Sbjct: 175 NPADFSFYFDTSGRRTCYIAPERFYETN--RGAPSNNELTPKMDIFSLGCVIAELFLDGF 232
Query: 239 PFFELSHLLAYRRGQYDPSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVV 297
P F+ S LL+YR+G+Y P + ++I D I+ +ILHMIQ +P+ R++ E Y+ + V
Sbjct: 233 PIFDFSQLLSYRKGEYSPEPIIRQRIQDPNIQTLILHMIQKDPDQRYTPEKYISKWNTV- 291
Query: 298 FPTYFSPFLHNFYCCWNPLHSDMRVAMCRS-VFPEILKQMMGN------KS-------SE 343
FP YFS F H F L +D RV MC S F EI+ N KS S
Sbjct: 292 FPQYFS-FAHQFIPELMRLENDDRV-MCISDKFDEIVDIFKNNSITNLFKSNLNQSTNSN 349
Query: 344 DIGS-GVGTPSTAMSVKESQERVTKQNLN 371
IGS V TPS+ + + + N N
Sbjct: 350 TIGSFRVSTPSSPILISNNNNNNNNNNNN 378
|
|
| UNIPROTKB|E2QZF5 PIK3R4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 521 (188.5 bits), Expect = 1.9e-145, Sum P(5) = 1.9e-145
Identities = 131/386 (33%), Positives = 202/386 (52%)
Query: 488 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 547
E K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EGEPKENGLVILVSVITSCLQTLKYCDSKLAALELILHLAPRLSVEILLDRITPYLLHFS 426
Query: 548 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 607
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NDSVPRVRAEALRTLTKVLALVKEVPRNDVNIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 608 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 667
A LA TA FL ++L + P+S V N D +L L + +
Sbjct: 487 ALLAETALRFL-ELVQLKNLNM-------ENDPNSEEIGEVTHPNGNYDTELQALHEMVQ 538
Query: 668 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 725
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 539 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 596
Query: 726 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 785
F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ G L+K + E
Sbjct: 597 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLGLLQKPHVYE 655
Query: 786 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 845
P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 656 FASDIAPFLCHPNLWIRYGAVGFITVVAHQISTADVYCKLMPYLEPYITQPIIQIERKLV 715
Query: 846 LLSCLKPPVSREVFYQVLENARSSDM 871
LLS LK PVSR +F L RS D+
Sbjct: 716 LLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| ZFIN|ZDB-GENE-050309-84 pik3r4 "phosphoinositide-3-kinase, regulatory subunit 4" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 620 (223.3 bits), Expect = 1.5e-144, Sum P(5) = 1.5e-144
Identities = 144/329 (43%), Positives = 191/329 (58%)
Query: 1 MGNKIA--KTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFK 58
MGN++A +Q + + Y D+ ++ + LG +RFFK KH EGLV+VKV+
Sbjct: 1 MGNQLAGIAPSQILSVDSYFSDI---HDYEYDKSLGSTRFFKVARAKHREGLVVVKVFAI 57
Query: 59 RGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTP 118
+ + L Y++ + ++ S + FQ T+KAA L RQY ++L DR+ST
Sbjct: 58 QDPSLPLTSYKQEVEELKIRLHSCQN--CLPFQKATLTEKAAILFRQYVRDNLYDRISTR 115
Query: 119 PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178
PFL+ VEKKW+AFQLL AV Q H+ G+ HGDIK ENV+VTSWNW+ L+DFASFKPTY+P
Sbjct: 116 PFLNNVEKKWIAFQLLNAVDQAHKSGVRHGDIKTENVMVTSWNWVLLTDFASFKPTYLPE 175
Query: 179 XXXXXXXXXXXTGGKRLCYLAPERFYEHGGEM---QVAQDAPL--------------KPS 221
T +R CY+APERF + G M + Q PL K
Sbjct: 176 DNPADFNYFFDTSRRRTCYIAPERFVD--GSMFATESDQTTPLVDLSSNSQRTRGELKQP 233
Query: 222 MDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEP 280
MDIF+ GCVIAELF E VP F+LS LLAYR+G + Q L KI D IR+++ M+Q EP
Sbjct: 234 MDIFSAGCVIAELFTEGVPLFDLSQLLAYRKGHFQTEQVLMKIEDHSIRELVAQMVQREP 293
Query: 281 ELRFSAESYLQNYAAVVFPTYFSPFLHNF 309
E R +AE YL+ FP F FL +
Sbjct: 294 EKRLTAEEYLKQQRGKAFPEIFYTFLQPY 322
|
|
| MGI|MGI:1922919 Pik3r4 "phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 2.4e-144, Sum P(5) = 2.4e-144
Identities = 132/388 (34%), Positives = 203/388 (52%)
Query: 488 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 547
E + G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EGESRASGLVVLVSVITSCLQTLKSCDSKLAALELILHLAPRLSVEILLDRITPYLLHFS 426
Query: 548 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 607
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NDSVPRVRAEALRTLTKVLALVQEVPRNDVNIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 608 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNAD--VQLSQLRKS 665
A LA TA FL L + L+ + P NE + R N D +L L +
Sbjct: 487 ALLAETALRFL----ELVQLKTLNMENEP------DNEEVDEATRPNGDYDTELQALHEM 536
Query: 666 IAEVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLR 723
+ + V L+ P+ +++ L++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 537 VQQKVVTLLSDPENI--VKQTLMESGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLR 594
Query: 724 AVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRIL 783
F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ G L+K +
Sbjct: 595 GAFFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLGLLQKPHV 653
Query: 784 LEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASV 843
E P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 654 YEFASDIAPFLCHPNLWIRYGAVGFITVVAHQISTADVYCKLMPYLDPYITQPVIQIERK 713
Query: 844 KALLSCLKPPVSREVFYQVLENARSSDM 871
LLS LK PVSR +F L RS D+
Sbjct: 714 LVLLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| RGD|1311809 Pik3r4 "phosphoinositide-3-kinase, regulatory subunit 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 510 (184.6 bits), Expect = 1.1e-143, Sum P(5) = 1.1e-143
Identities = 130/386 (33%), Positives = 202/386 (52%)
Query: 488 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 547
E K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EGESKASGLVVLVSVITSCLQTLKSCDSKLAALELILHLAPRLSVEILLDRITPYLLHFS 426
Query: 548 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 607
++ VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NNSVPRVRAEALRTLTKVLALVQEVPRNDVNIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 608 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 667
A LA TA FL E L L+ ++ P S + D +L L + +
Sbjct: 487 ALLAETALRFL-------ELVQLKTLNMENE-PDSEEVDEATRPNGDYDTELQALHEMVQ 538
Query: 668 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 725
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 539 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 596
Query: 726 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 785
F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ G L+K + E
Sbjct: 597 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLGLLQKPHVYE 655
Query: 786 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 845
P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 656 FASDIAPFLCHPNLWIRYGAVGFITVVAHQISTADVYCKLMPYLDPYITQPVIQIERKLV 715
Query: 846 LLSCLKPPVSREVFYQVLENARSSDM 871
LLS LK PVSR +F L RS D+
Sbjct: 716 LLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| UNIPROTKB|Q99570 PIK3R4 "Phosphoinositide 3-kinase regulatory subunit 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 512 (185.3 bits), Expect = 2.2e-143, Sum P(5) = 2.2e-143
Identities = 130/386 (33%), Positives = 201/386 (52%)
Query: 488 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 547
E K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EGEPKENGLVILVSVITSCLQTLKYCDSKLAALELILHLAPRLSVEILLDRITPYLLHFS 426
Query: 548 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 607
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NDSVPRVRAEALRTLTKVLALVKEVPRNDINIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 608 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 667
A LA TA FL ++L + P++ V N D +L L + +
Sbjct: 487 ALLAETALRFL-ELVQLKNLNM-------ENDPNNEEIDEVTHPNGNYDTELQALHEMVQ 538
Query: 668 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 725
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 539 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 596
Query: 726 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 785
F+ IV V +VG +S L P ++Q LSDA E VIV AL L +C+ G L+K + E
Sbjct: 597 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALYALTCMCQLGLLQKPHVYE 655
Query: 786 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 845
P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 656 FASDIAPFLCHPNLWIRYGAVGFITVVARQISTADVYCKLMPYLDPYITQPIIQIERKLV 715
Query: 846 LLSCLKPPVSREVFYQVLENARSSDM 871
LLS LK PVSR +F L RS D+
Sbjct: 716 LLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| UNIPROTKB|A6QLW1 PIK3R4 "PIK3R4 protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 520 (188.1 bits), Expect = 3.1e-143, Sum P(5) = 3.1e-143
Identities = 132/394 (33%), Positives = 204/394 (51%)
Query: 480 GMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRV 539
G L + K G+V++ S++ SC++ +K + AA+ L+ + + E L R+
Sbjct: 359 GHDLLEKADGEPKENGLVILVSVITSCLQTLKYCDSKLAALELILHLAPRLSVEILLDRI 418
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
P+++ +D VR AL TL +L LV+ P +D I+PEYILP ++ L D V
Sbjct: 419 TPYLLHFSNDSVPRVRAEALRTLTKVLALVKEVPRNDVNIYPEYILPGIAHLAQDDATIV 478
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
R+ YA NIA LA TA FL ++L + P+S V N D +L
Sbjct: 479 RLAYAENIALLAETALRFL-ELVQLKNLNM-------ENDPNSEEIDEVTHPNGNYDTEL 530
Query: 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDR 718
L + + + V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+
Sbjct: 531 QALHEMVQQKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDK 588
Query: 719 DE-QLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGY 777
++ LR F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ G
Sbjct: 589 NDWHLRGAFFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLGL 647
Query: 778 LRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQP 837
L+K + E P LC+P+ W+R V FI + + D Y L P + P++ +
Sbjct: 648 LQKPHVYEFASDIAPFLCHPNLWIRYGAVGFITVVAHQISTADVYCKLMPYLDPYITQPI 707
Query: 838 ASLASVKALLSCLKPPVSREVFYQVLENARSSDM 871
+ LLS LK PVSR +F L RS D+
Sbjct: 708 IQIERKLVLLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| UNIPROTKB|Q5R9I3 PIK3R4 "Phosphoinositide 3-kinase regulatory subunit 4" [Pongo abelii (taxid:9601)] | Back alignment and assigned GO terms |
|---|
Score = 513 (185.6 bits), Expect = 1.6e-141, Sum P(5) = 1.6e-141
Identities = 129/386 (33%), Positives = 202/386 (52%)
Query: 488 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 547
E+ K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 367 EEEPKENGLVILVSVITSCLQTLKYYDSKLAALELILHLAPRLGVEILLDRITPYLLHFS 426
Query: 548 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 607
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA NI
Sbjct: 427 NDSVPRVRAEALRTLTKVLALVKEVPRNDINIYPEYILPGIAHLAQDDATIVRLAYAENI 486
Query: 608 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 667
A LA TA FL ++L + P++ V N D +L L + +
Sbjct: 487 ALLAETALRFL-ELVQLKNLNM-------ENDPNNEEIDEVTHPNGNYDTELQALHEMVQ 538
Query: 668 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 725
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 539 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 596
Query: 726 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 785
F+ IV V +VG +S L P ++Q LSDA E VIV AL L +C+ G L+K + E
Sbjct: 597 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALYALTCMCQLGLLQKPHVYE 655
Query: 786 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 845
P LC+P+ W+R V F+ + + D Y L P + P++ + +
Sbjct: 656 FASDIAPFLCHPNLWIRYGAVGFVTVVARQISTADVYCKLMPYLDPYITQPIIQIERKLV 715
Query: 846 LLSCLKPPVSREVFYQVLENARSSDM 871
LLS LK PVSR +F L RS D+
Sbjct: 716 LLSVLKEPVSRSIFDYAL---RSKDI 738
|
|
| UNIPROTKB|I3LEJ8 PIK3R4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 495 (179.3 bits), Expect = 9.3e-139, Sum P(5) = 9.3e-139
Identities = 131/401 (32%), Positives = 204/401 (50%)
Query: 488 EDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAML 547
E K G+V++ S++ SC++ +K + AA+ L+ + + E L R+ P+++
Sbjct: 368 EGEPKESGLVILVSVITSCLQTLKYCDSKLAALELILHLAPKLSVEILLDRITPYLLHFS 427
Query: 548 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNI 607
+D VR AL TL +L LV+ P +D I+PEYILP ++ L D VR+ YA I
Sbjct: 428 NDSVPRVRAEALRTLTKVLALVKEVPRNDVNIYPEYILPGIAHLAQDDATIVRLAYAEKI 487
Query: 608 AKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIA 667
A LA TA FL E L L+ + S S + + D +L L + +
Sbjct: 488 ALLAETALRFL-------ELVQLKNLNMENDPNSESTHPNGEY-----DTELQALHEMVQ 535
Query: 668 EVVQELVMGPKQTPSIRRALLQD-IGNLCSFFGQRQSNDFLLPILPAFLNDRDE-QLRAV 725
+ V L+ P+ +++ L+++ I LC FFG++++ND LL + FLND+++ LR
Sbjct: 536 QKVVTLLSDPENI--VKQTLMENGITRLCVFFGRQKANDVLLSHMITFLNDKNDWHLRGA 593
Query: 726 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE 785
F+ IV V +VG +S L P ++Q LSDA E VIV AL+ L +C+ L+K + E
Sbjct: 594 FFDSIVGVAAYVGWQS-SSILKPLLQQGLSDAEEFVIVKALNALTCMCQLALLQKPHVYE 652
Query: 786 MIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKA 845
P LC+P+ W+R V FI + + D Y L P + P++ + +
Sbjct: 653 FASDIAPFLCHPNLWIRYGAVGFITVVAHQISIADVYCKLMPYLDPYITQPIIQIERKLV 712
Query: 846 LLSCLKPPVSREVFYQVLENARSSDMLERQRKIWYNTSSQS 886
LLS LK PVSR +F L RS D+ R + +S
Sbjct: 713 LLSVLKEPVSRSIFDYAL---RSKDITSLFRHLHMRQKKRS 750
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1553 | |||
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 4e-24 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 8e-24 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 7e-19 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 2e-17 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-13 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 7e-13 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-12 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-11 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 2e-10 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 5e-10 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 6e-10 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 8e-10 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 1e-09 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-09 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 2e-09 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 3e-09 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 4e-09 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 1e-08 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 1e-08 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 2e-08 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 2e-08 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 4e-08 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 4e-08 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 9e-08 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-07 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 2e-07 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-07 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 2e-07 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-07 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 2e-07 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 4e-07 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 6e-07 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 6e-07 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 8e-07 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 9e-07 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 9e-07 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 1e-06 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-06 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-06 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-06 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 5e-06 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 6e-06 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 1e-05 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 2e-05 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 2e-05 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 3e-05 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 3e-05 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 4e-05 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 5e-05 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 6e-05 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 6e-05 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 7e-05 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 1e-04 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 1e-04 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 1e-04 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-04 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 2e-04 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 2e-04 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-04 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 3e-04 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 3e-04 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 4e-04 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 4e-04 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 5e-04 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 7e-04 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 0.001 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 0.001 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 0.001 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 0.001 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 0.001 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 0.002 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 0.002 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 0.002 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 0.002 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 0.002 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 0.002 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 0.002 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 0.002 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 0.003 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 0.003 | |
| pfam02985 | 31 | pfam02985, HEAT, HEAT repeat | 0.003 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 0.004 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 0.004 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 0.004 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 101 bits (255), Expect = 4e-24
Identities = 60/265 (22%), Positives = 98/265 (36%), Gaps = 56/265 (21%)
Query: 33 LGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAF 90
LG F L + + V +K+ K L E R + E + ++HP++
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREI----EILKKLNHPNIVKL 56
Query: 91 QFWQETDKAAYLLRQYFFN-SLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHG 148
E + YL+ +Y SL+D L LS E + Q+L ++ H GI H
Sbjct: 57 YGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHR 116
Query: 149 DIKCENVLVTSWNW-LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHG 207
D+K EN+L+ S N + L+DF K + T Y+APE
Sbjct: 117 DLKPENILLDSDNGKVKLADFGLSKLL-------TSDKSLLKTIVGTPAYMAPEVLL--- 166
Query: 208 GEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267
DI+++G ++ EL
Sbjct: 167 ------GKGYYSEKSDIWSLGVILYEL-------------------------------PE 189
Query: 268 IRKMILHMIQLEPELRFSAESYLQN 292
++ +I M+Q +PE R SA+ L++
Sbjct: 190 LKDLIRKMLQKDPEKRPSAKEILEH 214
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 8e-24
Identities = 69/277 (24%), Positives = 111/277 (40%), Gaps = 43/277 (15%)
Query: 29 LKEVLG-GSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIR---ETFRSI 82
+ E LG GS F K L + LV +KV I ++ ++ I + + +
Sbjct: 3 ILEKLGEGS-FGKVYLARDKKTGKLVAIKV-------IKKKKIKKDRERILREIKILKKL 54
Query: 83 DHPHVWAFQFWQETDKAAYLLRQYF-FNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH 141
HP++ E + YL+ +Y L D L LS E ++ Q+L A++ H
Sbjct: 55 KHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLH 114
Query: 142 EKGICHGDIKCENVLVTSWNWLYLSDF--ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLA 199
KGI H D+K EN+L+ + L+DF A D + F T Y+A
Sbjct: 115 SKGIVHRDLKPENILLDEDGHVKLADFGLARQ------LDPGEKLTTFVGT----PEYMA 164
Query: 200 PERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY----RRGQY 254
PE V ++DI+++G ++ EL + PF LL + +
Sbjct: 165 PE----------VLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKP 214
Query: 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
I +I ++ +PE R +AE LQ
Sbjct: 215 PFPPPEWDISPEAKD-LIRKLLVKDPEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 7e-19
Identities = 68/275 (24%), Positives = 105/275 (38%), Gaps = 29/275 (10%)
Query: 27 LVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDH 84
L LG F KH +V VK+ KR + + RR I R + H
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRI---LRRLSH 57
Query: 85 PHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK 143
P++ E YL+ +Y L D LS LS E K +A Q+L ++ H
Sbjct: 58 PNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSN 117
Query: 144 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 203
GI H D+K EN+L+ + ++DF K + F G Y+APE
Sbjct: 118 GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTF-----VGTPW--YMAPEV- 169
Query: 204 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFF---ELSHLLAYRR---GQYDP 256
+ P +D++++G ++ EL + PF L L RR +
Sbjct: 170 ------LLGGNGYG--PKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPLEF 221
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ + +I + +P R +AE LQ
Sbjct: 222 DEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQ 256
|
Length = 260 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 85.9 bits (211), Expect = 2e-17
Identities = 65/288 (22%), Positives = 106/288 (36%), Gaps = 32/288 (11%)
Query: 24 SYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
SY ++ LG F + L + + LV +KV K + R + S++
Sbjct: 1 SYRIL--RKLGEGSFGEVYLARDRK-LVALKVLAK--KLESKSKEVERFLREIQILASLN 55
Query: 84 HPH--VWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF---LSLVEKKWLAFQLLLAVK 138
HP V + F+Q+ ++ SL D L LS E ++ Q+L A++
Sbjct: 56 HPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALE 115
Query: 139 QCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCY 197
H KGI H DIK EN+L+ + L DF K S T Y
Sbjct: 116 YLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAK-LLPDPGSTSSIPALPSTSVGTPGY 174
Query: 198 LAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF------------FELS 244
+APE + A S DI+++G + EL PF ++
Sbjct: 175 MAPEV-------LLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKII 227
Query: 245 HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292
L S ++ ++ ++ +P+ R S+ S L +
Sbjct: 228 LELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275
|
Length = 384 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 72.0 bits (177), Expect = 3e-13
Identities = 57/259 (22%), Positives = 97/259 (37%), Gaps = 46/259 (17%)
Query: 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1188
G L+ L+ H V ++A S D ++ S S D T+++WD E + H
Sbjct: 41 GELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTG----HTS-- 94
Query: 1189 RALCTMMLRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGISDIK-KKDTKEGAIV 1246
+ ++ +++ + D I ++ +VE ++ ++ D V
Sbjct: 95 -YVSSVAFSPDGRILSSSSRDKTIKVW----------DVETGKCLTTLRGHTDW-----V 138
Query: 1247 TLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFV 1306
V ++ D S+Q+ I LWD R+ TL G V+S+ P G +
Sbjct: 139 NSVAFSPDG---TFVASSSQDGTIKLWDLRTGKCVATLTG--HTGEVNSVAFSPDGEKLL 193
Query: 1307 SGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366
S SS G + LWDL + + N S P Y+ A +E
Sbjct: 194 SSSSDGTIKLWDLSTG--------------KCLGTLRGHENGVNSVAFSPDGYLLASGSE 239
Query: 1367 ---VSLWNAENGSCHQVLR 1382
+ +W+ G C Q L
Sbjct: 240 DGTIRVWDLRTGECVQTLS 258
|
Length = 289 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 70.2 bits (173), Expect = 7e-13
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 49/182 (26%)
Query: 127 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF---------ASFKPTYI- 176
W QL LA+K H + I H DIK +N+ +TS + L DF T +
Sbjct: 107 DWF-VQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVG 165
Query: 177 -PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235
PY YL+PE Q+ P DI+++GCV+ EL
Sbjct: 166 TPY------------------YLSPELC----------QNKPYNYKSDIWSLGCVLYELC 197
Query: 236 -LEVPFFELSHL--LAYR--RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 290
L+ P FE +L LA + +GQY P + S +R ++ ++Q +PE R S L
Sbjct: 198 TLKHP-FEGENLLELALKILKGQYPP---IPSQYSSELRNLVSSLLQKDPEERPSIAQIL 253
Query: 291 QN 292
Q+
Sbjct: 254 QS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.4 bits (171), Expect = 2e-12
Identities = 46/178 (25%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 75 IRE--TFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAF 131
+RE + + HP++ T++ YL+ +Y L+ L P LS K + +
Sbjct: 46 LREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMY 105
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF---ASFKPTYIPYDDPSDFSFFF 188
QLL + CH I H D+K +N+L+ L L+DF +F Y
Sbjct: 106 QLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEV------ 159
Query: 189 DTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
L Y APE + Y ++DI++VGC+ AE+ P F
Sbjct: 160 ----VTLWYRAPEILLGSKHYS--------------TAVDIWSVGCIFAEMITGKPLF 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 66.2 bits (162), Expect = 2e-11
Identities = 47/171 (27%), Positives = 70/171 (40%), Gaps = 22/171 (12%)
Query: 76 RE--TFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPF-LSLVEKKWLAFQ 132
RE R + H ++ + YL+ +Y +L + L P L + +Q
Sbjct: 49 REVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQ 108
Query: 133 LLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG 192
LL A+ CH I H DIK EN+LV+ L L DF F+
Sbjct: 109 LLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFG--------------FARALRARP 154
Query: 193 KRLC--YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
Y+A R+Y E+ V D +D++A+GC++AEL P F
Sbjct: 155 ASPLTDYVA-TRWYR-APELLVG-DTNYGKPVDVWAIGCIMAELLDGEPLF 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 2e-10
Identities = 58/258 (22%), Positives = 100/258 (38%), Gaps = 44/258 (17%)
Query: 50 LVLVK-VYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQF--WQETDKAAYLLRQY 106
L+ VK V +L ER + S+ HP++ + E + +Y
Sbjct: 27 LMAVKSVELSGDSEEELEALEREI----RILSSLQHPNIVRYYGSERDEEKNTLNIFLEY 82
Query: 107 FFN-SLRDRLSTPPFLSLVEK--KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163
SL L F L E + Q+L + H GI H DIK N+LV S +
Sbjct: 83 VSGGSLSSLLKK--FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVV 140
Query: 164 YLSDF--ASFKPTYIPYDDPSDF--SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLK 219
L+DF A + + + ++APE V +
Sbjct: 141 KLADFGCAKRLGDIETGEGTGSVRGTPY---------WMAPE----------VIRGEEYG 181
Query: 220 PSMDIFAVGCVIAELFL-EVPFFELSHLLA--YRRGQYDPSQHLEKIPD---SGIRKMIL 273
+ DI+++GC + E+ + P+ EL + +A Y+ G S +IP+ + +
Sbjct: 182 RAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS---SGEPPEIPEHLSEEAKDFLR 238
Query: 274 HMIQLEPELRFSAESYLQ 291
++ +P+ R +A+ LQ
Sbjct: 239 KCLRRDPKKRPTADELLQ 256
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 5e-10
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 57/185 (30%)
Query: 131 FQLLLAVKQCHEKG-----ICHGDIKCENVLVTSWNWLYLSDF---------ASFKPTYI 176
QLLLA+ +CH + + H D+K N+ + + N + L DF +SF TY+
Sbjct: 112 TQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYV 171
Query: 177 --PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234
PY Y++PE DI+++GC+I EL
Sbjct: 172 GTPY------------------YMSPE----------QLNHMSYDEKSDIWSLGCLIYEL 203
Query: 235 F-LEVPFFELSHL-LA--YRRGQYDPSQHLEKIPD---SGIRKMILHMIQLEPELRFSAE 287
L PF + L LA + G++ IP S + ++I M+ ++P+ R S E
Sbjct: 204 CALSPPFTARNQLQLASKIKEGKFRR------IPYRYSSELNEVIKSMLNVDPDKRPSTE 257
Query: 288 SYLQN 292
LQ
Sbjct: 258 ELLQL 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.0 bits (151), Expect = 6e-10
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 26/120 (21%)
Query: 127 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186
K +QLL + CH GI H D+K EN+L+ + L L+DF + S
Sbjct: 101 KSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFG------SPVRP 154
Query: 187 FFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
+ R Y APE + Y +DI++VGC+ AEL P F
Sbjct: 155 YTHYVVTRW-YRAPELLLGDKGY--------------STPVDIWSVGCIFAELLSRRPLF 199
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 61.4 bits (150), Expect = 8e-10
Identities = 53/227 (23%), Positives = 89/227 (39%), Gaps = 55/227 (24%)
Query: 101 YLLRQYFFNSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 159
Y++ +Y + L L +P + + K QLL ++ H GI H DIK N+L+ +
Sbjct: 76 YMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN 135
Query: 160 WNWLYLSDF--ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP 217
L L+DF A + +D++ T L Y PE G +
Sbjct: 136 DGVLKLADFGLA----RPYTKRNSADYTNRVIT----LWYRPPELLL---GATR------ 178
Query: 218 LKPSMDIFAVGCVIAELFLEVPFF-------------------------ELSHLLAYRRG 252
P +D+++VGC++AELFL P F +S L +
Sbjct: 179 YGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFE-- 236
Query: 253 QYDPSQHLE--------KIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
P + + + D ++ ++ L+P+ R SA+ LQ
Sbjct: 237 NLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 1e-09
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 34/174 (19%)
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 191
QLL + H GI H DIK N+ + + L DF + + +
Sbjct: 107 QLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAV--KLKNNTTTMGEEVQSLA 164
Query: 192 GKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH 245
G Y+APE + HG + DI+++GCV+ E+ + P+ EL +
Sbjct: 165 GTPA-YMAPEVITGGKGKGHGR------------AADIWSLGCVVLEMATGKRPWSELDN 211
Query: 246 LLA--YRRGQYDPSQHLEKIPDS------GIRKMILHMIQLEPELRFSAESYLQ 291
+ G IPDS G + ++ +P+ R +A LQ
Sbjct: 212 EFQIMFHVGAGHKPP----IPDSLQLSPEGKD-FLDRCLESDPKKRPTASELLQ 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-09
Identities = 65/257 (25%), Positives = 98/257 (38%), Gaps = 62/257 (24%)
Query: 75 IRET--FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLST---PPFLSLVEKKWL 129
IRE + + H ++ T+ L+ +Y L+ + T L K
Sbjct: 46 IREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSF 105
Query: 130 AFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189
+QLL + CHE + H D+K +N+L+ L L+DF + IP + FS
Sbjct: 106 TYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV---NTFSNEVV 162
Query: 190 TGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF--- 241
T L Y AP+ R Y S+DI++VGC++AE+ P F
Sbjct: 163 T----LWYRAPDVLLGSRTY--------------STSIDIWSVGCIMAEMITGRPLFPGT 204
Query: 242 ----------------------ELSHLLAYRRG--QYDP---SQHLEKIPDSGIRKMILH 274
+S L Y+ +Y P Q GI ++
Sbjct: 205 NNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGI-DLLHR 263
Query: 275 MIQLEPELRFSAESYLQ 291
++QL PELR SA LQ
Sbjct: 264 LLQLNPELRISAHDALQ 280
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 2e-09
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 127 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186
K + +Q L AV CH+ H D+K EN+L+T + L DF F D D++
Sbjct: 103 KKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFG-FARILTGPGD--DYTD 159
Query: 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 239
+ T R Y APE G+ Q P +D++A+GCV AEL P
Sbjct: 160 YVAT---RW-YRAPELLV---GDTQYG------PPVDVWAIGCVFAELLTGQP 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 59.8 bits (145), Expect = 3e-09
Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 63/199 (31%)
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 191
QLL + CH+K H DIKC N+L+ + + L+DF + +++
Sbjct: 124 QLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFG--------------LARLYNSE 169
Query: 192 GKR--------LCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF-- 241
R L Y PE G E P++D+++ GC++ ELF + P F
Sbjct: 170 ESRPYTNKVITLWYRPPELLL--GEER-------YGPAIDVWSCGCILGELFTKKPIFQA 220
Query: 242 --ELSHLLAYRR--GQYDPS-------------------------QHLEKIPDSGIRKMI 272
EL+ L R G P+ + IP + ++
Sbjct: 221 NQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPAL-DLL 279
Query: 273 LHMIQLEPELRFSAESYLQ 291
HM+ L+P R +AE L
Sbjct: 280 DHMLTLDPSKRCTAEEALN 298
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 4e-09
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 127 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS---FKPTYIPYDDPSD 183
++ A ++LLA++ H KGI H D+K EN+L+ + ++DF + P P + D
Sbjct: 105 RFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD 164
Query: 184 FSFFFDTGGKRLC----------YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233
+ K Y++PE + + P S D++A+GC+I +
Sbjct: 165 ATNIDSQIEKNRRRFASFVGTAEYVSPE----------LLNEKPAGKSSDLWALGCIIYQ 214
Query: 234 LFL-EVPFFELSHLLAYRR---GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 289
+ + PF + L +++ +Y + + +I ++ L+P+ R
Sbjct: 215 MLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPD----AKDLIEKLLVLDPQDRLGVNEG 270
Query: 290 LQN 292
Sbjct: 271 YDE 273
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.9 bits (141), Expect = 1e-08
Identities = 67/301 (22%), Positives = 115/301 (38%), Gaps = 96/301 (31%)
Query: 45 KHDEGLVLVKV----YFKRGDYIDLREYE--RRL------FHIRETFRSIDHPHVWAFQF 92
K LV +K ++ + ++LRE + R+L ++E FR D + F++
Sbjct: 21 KETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYF-VFEY 79
Query: 93 WQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 152
+ + ++DR P F V + + +Q+L + H+ G H D+K
Sbjct: 80 ----------MEGNLYQLMKDRKGKP-FSESVIRSII-YQILQGLAHIHKHGFFHRDLKP 127
Query: 153 ENVLVTSWNWLYLSDF------ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE----- 201
EN+LV+ + ++DF S +P Y Y R Y APE
Sbjct: 128 ENLLVSGPEVVKIADFGLAREIRS-RPPYTDYV------------STRW-YRAPEILLRS 173
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF-------------------- 241
Y +P+ DI+A+GC++AEL+ P F
Sbjct: 174 TSY----------SSPV----DIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPT 219
Query: 242 --------ELSHLLAYRRGQYDP---SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 290
+L+ L +R Q+ P Q + I +I M++ +P+ R +A L
Sbjct: 220 KQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAI-DLIKDMLRWDPKKRPTASQAL 278
Query: 291 Q 291
Q
Sbjct: 279 Q 279
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 1e-08
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 28/146 (19%)
Query: 118 PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177
P L K L QLL V H I H D+K +N+LVTS + ++DF + Y
Sbjct: 101 KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLAR-IY-- 157
Query: 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 237
F + L Y APE V + +D+++VGC+ AELF
Sbjct: 158 -----SFEMALTSVVVTLWYRAPE----------VLLQSSYATPVDMWSVGCIFAELFRR 202
Query: 238 VPFFELSHLLAYRRGQYDPSQHLEKI 263
P F RG + Q L+KI
Sbjct: 203 RPLF---------RGTSEADQ-LDKI 218
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 2e-08
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 32/177 (18%)
Query: 75 IRE--TFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRL---STPPFLSLVEKKWL 129
+RE ++ HP+V L+ +Y + L + L P L + K
Sbjct: 47 LREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVLRDEERP--LPEAQVKSY 104
Query: 130 AFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189
LL V H GI H D+K N+L+++ L ++DF + + + +
Sbjct: 105 MRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLAR----LFSEEEPRLYSHQ 160
Query: 190 TGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
+ Y APE R Y+ P +D++AVGC+ AEL P F
Sbjct: 161 VATRW--YRAPELLYGARKYD--------------PGVDLWAVGCIFAELLNGSPLF 201
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 2e-08
Identities = 55/205 (26%), Positives = 84/205 (40%), Gaps = 69/205 (33%)
Query: 127 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI--PYDDPSDF 184
K +QLL ++ H GI H DIK EN+L+ + L L+DF S + Y PY +
Sbjct: 103 KSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE---- 157
Query: 185 SFFFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 239
+ T R Y APE +Y P MDI+AVGCV E+ P
Sbjct: 158 --YIST---RW-YRAPECLLTDGYY--------------GPKMDIWAVGCVFFEILSLFP 197
Query: 240 FF----EL--------------SHLLAYRRGQYDPSQHLE-KIP---DSGIRKMILH--- 274
F EL + +L R S+H+ P +G+RK++ +
Sbjct: 198 LFPGTNELDQIAKIHDVLGTPDAEVLKKFR----KSRHMNYNFPSKKGTGLRKLLPNASA 253
Query: 275 --------MIQLEPELRFSAESYLQ 291
++ +P+ R +A+ L+
Sbjct: 254 EGLDLLKKLLAYDPDERITAKQALR 278
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 4e-08
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 22/134 (16%)
Query: 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA 169
SL D + TP S + K L QLL ++ HE I H D+K N+L+T L ++DF
Sbjct: 96 SLLDNMPTP--FSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFG 153
Query: 170 SFKPTYIPYDD--PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 227
+ +P P + L Y APE G ++D++AV
Sbjct: 154 LARTYGLPAKPMTPKVVT---------LWYRAPELLL--GCTTYTT-------AIDMWAV 195
Query: 228 GCVIAELFLEVPFF 241
GC++AEL P
Sbjct: 196 GCILAELLAHKPLL 209
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 4e-08
Identities = 52/217 (23%), Positives = 95/217 (43%), Gaps = 31/217 (14%)
Query: 83 DHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVE---KKWLAFQLLLAVK 138
HP++ + ET + Y++ +Y N SLR + F E ++ +Q+L +
Sbjct: 57 KHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIK--KFGPFPESLVAVYV-YQVLQGLA 113
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC-- 196
HE+G+ H DIK N+L T + L+DF T + D S +
Sbjct: 114 YLHEQGVIHRDIKAANILTTKDGVVKLADFGV--ATKLNDVSKDDASV--------VGTP 163
Query: 197 -YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-PFFELSHLLAYRRGQY 254
++APE V + + + DI+++GC + EL P+++L+ + A R
Sbjct: 164 YWMAPE----------VIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ 213
Query: 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
D L + ++ ++ Q +P LR +A+ L+
Sbjct: 214 DDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 56.3 bits (134), Expect = 9e-08
Identities = 47/204 (23%), Positives = 76/204 (37%), Gaps = 25/204 (12%)
Query: 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1188
L+ L H S+V +A S D S S D TV++WD + S LT
Sbjct: 274 SSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKL----LSSLTLKGHEG 329
Query: 1189 RALCTMMLRHSAQVVVGAC-DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVT 1247
+ +V G DG I ++ + + L +E +S + + + +G +V+
Sbjct: 330 PVSSLSFSPDGSLLVSGGSDDGTIRLWDLRT-GKPLKTLEGHSNVLSVSF--SPDGRVVS 386
Query: 1248 LVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVS 1307
+ + + LWD + S L V+SL P G S
Sbjct: 387 SGSTDGT---------------VRLWDLSTGSLLRNLDGHT--SRVTSLDFSPDGKSLAS 429
Query: 1308 GSSRGVLTLWDLRFLVPVNSWQYS 1331
GSS + LWDL+ + S+
Sbjct: 430 GSSDNTIRLWDLKTSLKSVSFSPD 453
|
Length = 466 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-07
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1167
G L+ L+ H V +A S D + S SDD TV+VWD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 2e-07
Identities = 57/254 (22%), Positives = 94/254 (37%), Gaps = 61/254 (24%)
Query: 63 IDLREYERRLFHIRE--TFRSIDHPHVWAFQFWQETDKAAYLLRQYFFN----------- 109
I L E++ I E + HP++ + Y
Sbjct: 33 IKLESKEKKEKIINEIQILKKCKHPNIVKY------------YGSYLKKDELWIVMEFCS 80
Query: 110 --SLRDRLSTPPFLSLVEKKWLAF---QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLY 164
SL+D L + + + +A+ +LL ++ H GI H DIK N+L+TS +
Sbjct: 81 GGSLKDLLKS--TNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVK 138
Query: 165 LSDF---ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPS 221
L DF A T + + G ++APE V P
Sbjct: 139 LIDFGLSAQLSDT------KARNTM---VGTP--YWMAPE----------VINGKPYDYK 177
Query: 222 MDIFAVGCVIAELFL-EVPFFELSHLLA-YRRGQYDP--SQHLEKIPDSGIRKMILHMIQ 277
DI+++G EL + P+ EL + A ++ P ++ EK D + + +Q
Sbjct: 178 ADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDE-FKDFLKKCLQ 236
Query: 278 LEPELRFSAESYLQ 291
PE R +AE L+
Sbjct: 237 KNPEKRPTAEQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 2e-07
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1167
G L+ L+ H V +A S D + S SDD T+K+WD
Sbjct: 2 GELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 2e-07
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 61/234 (26%)
Query: 24 SYNLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGD-----YIDLREYE--RRLFH 74
SY +V+K CKH E +V +K + + D I +RE ++L H
Sbjct: 13 SYGMVMK-------------CKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRH 59
Query: 75 -----IRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPP--FLSLVEKK 127
+ E FR K YL+ ++ +++ D L P +K
Sbjct: 60 ENLVNLIEVFRR---------------KKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRK 104
Query: 128 WLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187
+L FQ+L ++ CH I H DIK EN+LV+ + L DF + P + +D+
Sbjct: 105 YL-FQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYV-- 161
Query: 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
R Y APE + D ++DI+AVGC++ E+ P F
Sbjct: 162 ----ATRW-YRAPE---------LLVGDTKYGRAVDIWAVGCLVTEMLTGEPLF 201
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 126 KKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 185
K+++A +++L V+ H++GI H DIK EN+L+ L L+DF +
Sbjct: 100 KQYIA-EVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK------ 152
Query: 186 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 242
F T YLAPE G + D +++GCVI E P F
Sbjct: 153 -FVGTPD----YLAPETILGVGDDKMS----------DWWSLGCVIFEFLFGYPPFH 194
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 2e-07
Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 38/273 (13%)
Query: 32 VLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRL-FHIRETFRSIDHPHVWAF 90
VLG F ++ L + E LV +K + L E ERR + + HP++ A+
Sbjct: 7 VLGKGAFGEATLYRRTEDDSLV--VWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAY 64
Query: 91 QFWQETDKAAYLLRQYFFN--SLRDRLSTPPFLSLVEKK--WLAFQLLLAVKQCHEKGIC 146
+ D L+ + N +L D++ E+ W FQ++ AV H+ GI
Sbjct: 65 -YNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGIL 123
Query: 147 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEH 206
H DIK N+ +T + L DF K S++S G Y++PE
Sbjct: 124 HRDIKTLNIFLTKAGLIKLGDFGISKIL------GSEYSMAETVVGTPY-YMSPE----- 171
Query: 207 GGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEK 262
+ Q DI+A+GCV+ EL F+ ++ L +G Y P
Sbjct: 172 -----LCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP------ 220
Query: 263 IPD---SGIRKMILHMIQLEPELRFSAESYLQN 292
+ S + ++ ++Q +PE R +A+ L
Sbjct: 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.5 bits (127), Expect = 4e-07
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 46/225 (20%)
Query: 80 RSIDHPHV----WAFQFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEK--KWLAFQ 132
I+HP + +AFQ T++ YL+ +Y L LS E+ ++ A +
Sbjct: 48 SRINHPFIVKLHYAFQ----TEEKLYLVLEYAPGGELFSHLS--KEGRFSEERARFYAAE 101
Query: 133 LLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG 192
++LA++ H GI + D+K EN+L+ + + L+DF K + + +F
Sbjct: 102 IVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKE--LSSEGSRTNTF------ 153
Query: 193 KRLC----YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLL 247
C YLAPE V ++D +++G ++ E L + PF+
Sbjct: 154 ---CGTPEYLAPE----------VLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE 200
Query: 248 AYRRGQYDPSQHLEKIP---DSGIRKMILHMIQLEPELRFSAESY 289
Y + DP + P R +I ++Q +P R +
Sbjct: 201 IYEKILKDP----LRFPEFLSPEARDLISGLLQKDPTKRLGSGGA 241
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 6e-07
Identities = 44/179 (24%), Positives = 72/179 (40%), Gaps = 53/179 (29%)
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA------------SFKPTYIPYD 179
Q+LL ++ H++ H DIK N+LV + + L+DF SFK + PY
Sbjct: 110 QILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGS--PY- 166
Query: 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 239
++APE +AQ + DI+++GC + E+ P
Sbjct: 167 -----------------WMAPE---------VIAQQGGYGLAADIWSLGCTVLEMATGKP 200
Query: 240 ----FFELSHLLAYRRGQYDPSQHLEKIPDS---GIRKMILHMIQLEPELRFSAESYLQ 291
++ + R S+ L IPD + IL +Q +P LR +A L+
Sbjct: 201 PWSQLEGVAAVFKIGR-----SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 6e-07
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 128 WLAF-QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186
W F QLL ++ HE+ I H D+K N+L+ + + + + D K
Sbjct: 106 WRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLK---------KN 156
Query: 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL 246
T Y+APE V + P DI+++GC++ E+ P FE +
Sbjct: 157 MAKTQIGTPHYMAPE----------VWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM 206
Query: 247 --LAYR--RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295
L Y+ RG+Y P + I ++ I M+Q++P+LR + + L + A
Sbjct: 207 QDLRYKVQRGKYPP---IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 53.2 bits (126), Expect = 8e-07
Identities = 89/432 (20%), Positives = 148/432 (34%), Gaps = 65/432 (15%)
Query: 1135 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTM 1194
L+ H ++ IA S D +S S D T+K+WD EK I +S H L
Sbjct: 61 LRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLI--KSLEGLHDSSVSKLALS 118
Query: 1195 ML-RHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNT 1253
+S + + DG + ++ + + + +E +S VT + ++
Sbjct: 119 SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSE-------------SVTSLAFSP 165
Query: 1254 DNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNW-FVSGSSRG 1312
D + S+ + I LWD R+ TL VSSL P G SGSS G
Sbjct: 166 DG--KLLASGSSLDGTIKLWDLRTGKPLSTLA--GHTDPVSSLAFSPDGGLLIASGSSDG 221
Query: 1313 VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR--PLIYVAAGCNEVSLW 1370
+ LWDL + S ++ VS+ + L+ + + LW
Sbjct: 222 TIRLWDLSTGKLLRS-------------TLSGHSDSVVSSFSPDGSLLASGSSDGTIRLW 268
Query: 1371 NAENGSCHQVLRTANYDGDTEMS---DLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1427
+ + S + + ++ D + S + DL + +E
Sbjct: 269 DLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHE 328
Query: 1428 PPPRLLGIRSLLPLPGGDLL--TGGTDLKIRRWDHCSPGRSYCICGPN----LKGVGNDE 1481
P + SL P G LL G D IR WD + + G + + +
Sbjct: 329 GP-----VSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGR 383
Query: 1482 FYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLI 1541
+ S+ G + + L L H + SL + + L
Sbjct: 384 VVSSGSTDGTVRLWDLSTGSLLRNL--------------DGHTSRVTSL-DFSPDGKSLA 428
Query: 1542 SSSRDGAIKVWK 1553
S S D I++W
Sbjct: 429 SGSSDNTIRLWD 440
|
Length = 466 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 9e-07
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 34/131 (25%)
Query: 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179
L+ + K L ++ H I H D+K N+L+ S L L+DF
Sbjct: 98 VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFG---------- 147
Query: 180 DPSDFSFFFDTGGKRLC-------YLAPERFY--EHGGEMQVAQDAPLKPSMDIFAVGCV 230
+ F + +++ Y APE + H G +D+++VGC+
Sbjct: 148 ----LARSFGSPNRKMTHQVVTRWYRAPELLFGARHYG-----------VGVDMWSVGCI 192
Query: 231 IAELFLEVPFF 241
AEL L VPF
Sbjct: 193 FAELLLRVPFL 203
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 9e-07
Identities = 61/280 (21%), Positives = 110/280 (39%), Gaps = 67/280 (23%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHI---RETFRSID 83
+ LG F + +L +H +K+ + + L++ E H+ + +SI
Sbjct: 5 FIKTLGTGSFGRVMLVRHKGSGKYYALKI-LSKAKIVKLKQVE----HVLNEKRILQSIR 59
Query: 84 HPHV----WAFQFWQETDKAAYLLRQY-----FFNSLR--DRLSTPPFLSLVEKKWLAFQ 132
HP + +FQ D YL+ +Y F+ LR R P ++ A Q
Sbjct: 60 HPFLVNLYGSFQ----DDSNLYLVMEYVPGGELFSHLRKSGRFPEP------VARFYAAQ 109
Query: 133 LLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG 192
++LA++ H I + D+K EN+L+ S ++ ++DF F+
Sbjct: 110 VVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFG--------------FAKRVKGRT 155
Query: 193 KRLC----YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247
LC YLAPE G V D +A+G +I E+ PFF+ + +
Sbjct: 156 YTLCGTPEYLAPEIILSKGYGKAV----------DWWALGILIYEMLAGYPPFFDDNPIQ 205
Query: 248 AYRR---GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF 284
Y + G+ + +I +++Q++ R
Sbjct: 206 IYEKILEGKVRFPSFF----SPDAKDLIRNLLQVDLTKRL 241
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 1e-06
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 33/220 (15%)
Query: 31 EVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETF-RSIDHPHV 87
+V+G F K +L +H +E VKV K+ I ++ E+ + R +++ HP +
Sbjct: 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKA--ILKKKEEKHIMSERNVLLKNVKHPFL 58
Query: 88 WAFQF-WQETDKAAYLLR-----QYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH 141
F +Q DK ++L + F++ R+R P ++ A ++ A+ H
Sbjct: 59 VGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP-----RARFYAAEIASALGYLH 113
Query: 142 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE 201
I + D+K EN+L+ S + L+DF K S F G YLAPE
Sbjct: 114 SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTF-----CGTPE--YLAPE 166
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
V P ++D + +G V+ E+ +P F
Sbjct: 167 ----------VLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 196
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 51.8 bits (124), Expect = 1e-06
Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 37/190 (19%)
Query: 122 SLVEKKW---------LAF---QLLLAVKQCHEKGICHGDIKCENVLVTSWNW-LYLSDF 168
+L+ KW + F Q+L +K H+ I H DIK +NVLV +++ + +SDF
Sbjct: 94 ALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDF 153
Query: 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 228
+ K + +P +F TG L Y+APE + G AP DI+++G
Sbjct: 154 GTSK--RLAGINPCTETF---TG--TLQYMAPE-VIDKG---PRGYGAP----ADIWSLG 198
Query: 229 CVIAELFL-EVPFFELS--HLLAYRRGQYDPSQHLEKIPDS---GIRKMILHMIQLEPEL 282
C I E+ + PF EL ++ G + H E IP+S + IL + +P+
Sbjct: 199 CTIVEMATGKPPFIELGEPQAAMFKVGMF--KIHPE-IPESLSAEAKNFILRCFEPDPDK 255
Query: 283 RFSAESYLQN 292
R SA LQ+
Sbjct: 256 RASAHDLLQD 265
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 3e-06
Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Query: 1125 WRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTY 1183
W G + L+ H + VN +A S D S S+D T++VWD R E
Sbjct: 204 WDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE--------CVQ 255
Query: 1184 HLEG--SRALCTMMLRHSAQVVVGACDGIIHMFS 1215
L G + ++ G+ DG I ++
Sbjct: 256 TLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 3e-06
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 42/175 (24%)
Query: 123 LVEKKWLAF--QLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDF------ASFKP 173
L E L F Q+LLA+ H K I H D+K +N+L+ + + DF +S
Sbjct: 98 LDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157
Query: 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233
Y P CY++PE + + P DI+A+GCV+ E
Sbjct: 158 AYTVVGTP--------------CYISPE----------LCEGKPYNQKSDIWALGCVLYE 193
Query: 234 LFLEVPFFELSHL----LAYRRGQYDP-SQHLEKIPDSGIRKMILHMIQLEPELR 283
L FE ++L L G + P S PD +R++IL M+ L+P R
Sbjct: 194 LASLKRAFEAANLPALVLKIMSGTFAPISDRYS--PD--LRQLILSMLNLDPSKR 244
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 5e-06
Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 191
QLL + HE I H DIK N+L+ + L ++DF + PYD P G
Sbjct: 123 QLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR----PYDGPPPNPKGGGGG 178
Query: 192 GKR--------LCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 242
G R Y PE + + ++DI+ +GCV AE+F P +
Sbjct: 179 GTRKYTNLVVTRWYRPPE---------LLLGERRYTTAVDIWGIGCVFAEMFTRRPILQ 228
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 6e-06
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 101 YLLRQYFFNSLRDRLSTPPFLSLVEK-KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 159
YL+ +Y ++ + L P EK + +QL+ A+ CH+ I H DIK EN+L++
Sbjct: 76 YLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH 135
Query: 160 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLK 219
+ L L DF + + ++++ + T Y +PE + AP
Sbjct: 136 NDVLKLCDFGFARN--LSEGSNANYTEYVAT----RWYRSPE----------LLLGAPYG 179
Query: 220 PSMDIFAVGCVIAELFLEVPFF 241
++D+++VGC++ EL P F
Sbjct: 180 KAVDMWSVGCILGELSDGQPLF 201
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 48.7 bits (117), Expect = 1e-05
Identities = 48/225 (21%), Positives = 83/225 (36%), Gaps = 68/225 (30%)
Query: 124 VEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA---SFKPTYIPYDD 180
V K+++ +QLL A+K H + H D+K N+L+ S + L+DF S ++
Sbjct: 107 VHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPEN 166
Query: 181 PSDFSFFFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235
P + + T R Y APE Y G +D+++VGC++ E+
Sbjct: 167 P-VLTDYVAT---RW-YRAPEILLGSTRYTKG--------------VDMWSVGCILGEML 207
Query: 236 LEVPFF-----------------------------ELSHLL---AYRRGQYDPSQHLEKI 263
L P F + + R + + L K
Sbjct: 208 LGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKA 267
Query: 264 PDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHN 308
D + ++ ++ P R +AE L++ Y + F HN
Sbjct: 268 SDDAL-DLLKKLLVFNPNKRLTAEEALEH-------PYVAQF-HN 303
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 2e-05
Identities = 58/227 (25%), Positives = 93/227 (40%), Gaps = 53/227 (23%)
Query: 84 HPHVWAFQFWQETDKAAYLLRQY-----FFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVK 138
HP++ AF+ E D Y++ +Y ++ + F +W Q+ L V+
Sbjct: 57 HPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKL-FPEDTILQWFV-QMCLGVQ 114
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFAS---------FKPTYI--PYDDPSDFSFF 187
HEK + H DIK +N+ +T + L DF S + TY+ PY
Sbjct: 115 HIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPY--------- 165
Query: 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL-FLEVPFFELS-- 244
Y+ PE + ++ P DI+++GC++ EL L+ PF S
Sbjct: 166 ---------YVPPE----------IWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK 206
Query: 245 HL-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 290
+L L +G Y P L +R +I M + P R SA + L
Sbjct: 207 NLILKVCQGSYKP---LPSHYSYELRSLIKQMFKRNPRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 2e-05
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 103 LRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT-SWN 161
+ +Y + R+ + P FL K ++QL A+ H K ICH D+K +N+L+ + +
Sbjct: 153 VHKYMKHYARNNHALPLFLV----KLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTH 208
Query: 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPS 221
L L DF S K G+R RFY M A +
Sbjct: 209 TLKLCDFGSAKNLL---------------AGQRSVSYICSRFYRAPELMLGATN--YTTH 251
Query: 222 MDIFAVGCVIAELFLEVPFF 241
+D++++GC+IAE+ L P F
Sbjct: 252 IDLWSLGCIIAEMILGYPIF 271
|
Length = 440 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 3e-05
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 101 YLLRQYFFNSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158
Y++ +Y + L+ + T PF E K L QLL V H+ I H D+K N+L+
Sbjct: 82 YMVMEYVEHDLKSLMETMKQPF-LQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN 140
Query: 159 SWNWLYLSDFASFKPTYIPYDDP-SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP 217
+ L + DF + Y P ++ T L Y APE G + +
Sbjct: 141 NRGILKICDFGLAR----EYGSPLKPYTQLVVT----LWYRAPELLL---GAKEYS---- 185
Query: 218 LKPSMDIFAVGCVIAELFLEVPFF 241
++D+++VGC+ AEL + P F
Sbjct: 186 --TAIDMWSVGCIFAELLTKKPLF 207
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 3e-05
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 47/227 (20%)
Query: 31 EVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRET----FRSIDH 84
+V+G F K +L K D VKV K+ L++ E+ HI +++ H
Sbjct: 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKK---TILKKKEQN--HIMAERNVLLKNLKH 55
Query: 85 PHVWAFQFWQETDKAAYLLRQY------FFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVK 138
P + + +T + Y + Y FF+ R+R P ++ A ++ A+
Sbjct: 56 PFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEP-----RARFYAAEVASAIG 110
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC-- 196
H I + D+K EN+L+ S + L+DF K P + S F C
Sbjct: 111 YLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTF-----------CGT 159
Query: 197 --YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
YLAPE V + P ++D + +G V+ E+ +P F
Sbjct: 160 PEYLAPE----------VLRKEPYDRTVDWWCLGAVLYEMLYGLPPF 196
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 4e-05
Identities = 50/237 (21%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 71 RLFHIRETFRSIDHPHV----WAFQFWQETDKAAYLLRQYF----FNSLRDRLSTPPFLS 122
++ R+ P+V ++FQ K YL+ +Y SL + + +
Sbjct: 39 QVLTERDILSQAQSPYVVKLYYSFQ----GKKNLYLVMEYLPGGDLASLLENVGS--LDE 92
Query: 123 LVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182
V + ++A +++LA++ H GI H D+K +N+L+ S L L+DF + +
Sbjct: 93 DVARIYIA-EIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGL---SKVGLVRRQ 148
Query: 183 DFSFFFDTGGKRLC----YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237
+ KR+ Y+APE V ++D +++GC++ E +
Sbjct: 149 INLNDDEKEDKRIVGTPDYIAPE----------VILGQGHSKTVDWWSLGCILYEFLVGI 198
Query: 238 VPFFE------LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAES 288
PF ++L G+ + + +E ++ +I ++ +PE R A+S
Sbjct: 199 PPFHGETPEEIFQNILN---GKIEWPEDVEVSDEA--IDLISKLLVPDPEKRLGAKS 250
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 5e-05
Identities = 58/254 (22%), Positives = 102/254 (40%), Gaps = 59/254 (23%)
Query: 75 IRET--FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRL-STPPF-LSLVEKKWLA 130
IRE + ++HP++ T+ YL+ ++ L+ + ++P + L K
Sbjct: 47 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYL 106
Query: 131 FQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDT 190
FQLL + CH + H D+K +N+L+ + + L+DF + +P ++ T
Sbjct: 107 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---RTYTHEVVT 163
Query: 191 GGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF---- 241
L Y APE ++Y ++DI+++GC+ AE+ F
Sbjct: 164 ----LWYRAPEILLGCKYYS--------------TAVDIWSLGCIFAEMVTRRALFPGDS 205
Query: 242 ELSHLLAYRRG----------------QYDPS------QHLEKI-P--DSGIRKMILHMI 276
E+ L R Y PS Q K+ P D R ++ M+
Sbjct: 206 EIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQML 265
Query: 277 QLEPELRFSAESYL 290
+P R SA++ L
Sbjct: 266 HYDPNKRISAKAAL 279
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (112), Expect = 6e-05
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 42/180 (23%)
Query: 125 EKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184
E L Q+LLAV H K + H DIK N+L+ S + L DF F Y
Sbjct: 144 EAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG-FSKMYA-------- 194
Query: 185 SFFFDTGGKRLC----YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVP 239
+ D G+ C Y+APE + + P D+F++G ++ EL L+ P
Sbjct: 195 ATVSDDVGRTFCGTPYYVAPE----------IWRRKPYSKKADMFSLGVLLYELLTLKRP 244
Query: 240 F-----FELSH-LLAYRRGQYDPSQHLEKIPDS---GIRKMILHMIQLEPELRFSAESYL 290
F E+ H LA G+YDP +P S +++++ ++ +P+ R S+ L
Sbjct: 245 FDGENMEEVMHKTLA---GRYDP------LPPSISPEMQEIVTALLSSDPKRRPSSSKLL 295
|
Length = 496 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 46.5 bits (111), Expect = 6e-05
Identities = 51/194 (26%), Positives = 73/194 (37%), Gaps = 54/194 (27%)
Query: 75 IRET--FRSIDHPHVWAFQ--FWQETDKAAYLLRQYF---------FNSLRDRLSTPPFL 121
RE R + H +V + F + DK+ YLL Y F+ R+S PP +
Sbjct: 50 CREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSM 109
Query: 122 SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW----LYLSD--FASF--KP 173
K L +Q+L V H + H D+K N+LV + + D A P
Sbjct: 110 V----KSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAP 165
Query: 174 TYIPYD-DPSDFSFFFDTGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAV 227
D DP + + Y APE R Y ++DI+A+
Sbjct: 166 LKPLADLDPVVVTIW---------YRAPELLLGARHY--------------TKAIDIWAI 202
Query: 228 GCVIAELFLEVPFF 241
GC+ AEL P F
Sbjct: 203 GCIFAELLTLEPIF 216
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 7e-05
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 28/205 (13%)
Query: 63 IDLREYERRLFH--IRET--FRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLST 117
IDL + RR I E +D ++ + ++ +Y N L L
Sbjct: 33 IDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKM 92
Query: 118 PPFLSLVEKK-WLAF-QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175
L E + W F Q+LL + H K I H DIK N+ + +++ + + D K
Sbjct: 93 QRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLL- 151
Query: 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235
SD + F +T YL+PE + +D P D++A+G V+ E
Sbjct: 152 ------SDNTNFANTIVGTPYYLSPE----------LCEDKPYNEKSDVWALGVVLYECC 195
Query: 236 LEVPFFELSH----LLAYRRGQYDP 256
F+ ++ +L RG + P
Sbjct: 196 TGKHPFDANNQGALILKIIRGVFPP 220
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 1e-04
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 18/118 (15%)
Query: 127 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186
++ +QLL A+K H + H D+K +N+L + L + DF + + D P+ F
Sbjct: 106 QFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN--DTPTAI-F 162
Query: 187 FFDTGGKRLCYLAPE---RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
+ D R Y APE F+ + P++DI+++GC+ AE+ P F
Sbjct: 163 WTDYVATRW-YRAPELCGSFF-----------SKYTPAIDIWSIGCIFAEVLTGKPLF 208
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 1e-04
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 75 IRET--FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRL-STPPFLSLVEKKWLAF 131
IRE +++ H ++ T++ L+ +Y + L+ L + +S+ K F
Sbjct: 51 IREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMF 110
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 191
QLL + CH++ I H D+K +N+L+ L L+DF + +P S+
Sbjct: 111 QLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVV----- 165
Query: 192 GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
L Y P+ G + + +D++ VGC++ E+ P F
Sbjct: 166 --TLWYRPPDVLL---GSTEYST------PIDMWGVGCILYEMATGRPMF 204
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 1e-04
Identities = 46/176 (26%), Positives = 70/176 (39%), Gaps = 48/176 (27%)
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA---------SFKPTYI--PYDD 180
Q+ LA+K H++ I H DIK +N+ +T + L DF T I PY
Sbjct: 109 QICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPY-- 166
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 240
YL+PE + ++ P DI+A+GCV+ E+
Sbjct: 167 ----------------YLSPE----------ICENRPYNNKSDIWALGCVLYEMCTLKHA 200
Query: 241 FELSHL----LAYRRGQYDP-SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
FE ++ L RG Y P S H +R ++ + + P R S S L+
Sbjct: 201 FEAGNMKNLVLKIIRGSYPPVSSHYS----YDLRNLVSQLFKRNPRDRPSVNSILE 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 45.2 bits (107), Expect = 2e-04
Identities = 52/229 (22%), Positives = 88/229 (38%), Gaps = 56/229 (24%)
Query: 101 YLLRQY-------FFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 153
YL+ +Y F +S P ++ +QLL V CH+ G+ H D+K +
Sbjct: 82 YLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKS--FMYQLLKGVAHCHKHGVMHRDLKPQ 139
Query: 154 NVLV-TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQV 212
N+LV L ++D + IP ++ T L Y APE G
Sbjct: 140 NLLVDKQKGLLKIADLGLGRAFSIPV---KSYTHEIVT----LWYRAPEVLL---GSTHY 189
Query: 213 AQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRR----------------- 251
+ +DI++VGC+ AE+ + P F EL LL +
Sbjct: 190 ST------PVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLR 243
Query: 252 --------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292
D S+ + + G+ ++ M++ +P R SA++ L +
Sbjct: 244 DWHEFPQWKPQDLSRAVPDLSPEGL-DLLQKMLRYDPAKRISAKAALTH 291
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 2e-04
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 122 SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY-DD 180
+L E K + LL + H I H D+K N+L+T L L+DF + +
Sbjct: 117 TLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK 176
Query: 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVP 239
P+ ++ T L Y PE GE P +D++ GC++AE++ P
Sbjct: 177 PNRYTNRVVT----LWYRPPELLL---GERDYG------PPIDMWGAGCIMAEMWTRSP 222
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-04
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 75 IRET--FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSL---VEKKWL 129
IRE + ++HP++ ++ YL+ ++ L+ + + P L + K +L
Sbjct: 46 IREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYL 105
Query: 130 AFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189
+QLL + CH + H D+K +N+L+ L L+DF + +P ++
Sbjct: 106 -YQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV---RTYTHEVV 161
Query: 190 TGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
T L Y APE R Y +DI+++GC+ AE+ P F
Sbjct: 162 T----LWYRAPEILLGSRQYSTP--------------VDIWSIGCIFAEMVNRRPLF 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 2e-04
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLY-LSDFASFKPTYIPYDDPSDFSFFFDT 190
Q+ L +K H++ I H DIK +N+ ++ + L DF + +D + ++ T
Sbjct: 109 QISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIAR----QLNDSMELAY---T 161
Query: 191 GGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL-FLEVPF--FELSHL- 246
YL+PE + Q+ P DI+++GCV+ EL L+ PF L L
Sbjct: 162 CVGTPYYLSPE----------ICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLV 211
Query: 247 LAYRRGQYDP-SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
L +G + P S + + +R +I + ++ P R S S L+
Sbjct: 212 LKICQGYFAPISPNFSR----DLRSLISQLFKVSPRDRPSITSILK 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 3e-04
Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 18/124 (14%)
Query: 118 PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177
PP L K L Q L + H I H D+K EN+LVTS + L+DF Y
Sbjct: 102 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFG-LARIY-- 158
Query: 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE 237
L Y APE +Q P+ D+++VGC+ AE+F
Sbjct: 159 -----SCQMALTPVVVTLWYRAPEVL------LQSTYATPV----DMWSVGCIFAEMFRR 203
Query: 238 VPFF 241
P F
Sbjct: 204 KPLF 207
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 3e-04
Identities = 52/252 (20%), Positives = 96/252 (38%), Gaps = 51/252 (20%)
Query: 75 IRET--FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLS-TPPFLSLVEKKWLAF 131
IRE + + H ++ TDK+ L+ +Y L+ + +S+ K +
Sbjct: 52 IREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLY 111
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 191
Q+L + CH + + H D+K +N+L+ L L+DF + +P S+
Sbjct: 112 QILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVV----- 166
Query: 192 GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS------H 245
L Y P+ + + +D++ VGC+ E+ P F S H
Sbjct: 167 --TLWYRPPD---------VLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELH 215
Query: 246 LL----------------------AYRRGQYDPS---QHLEKIPDSGIRKMILHMIQLEP 280
L+ Y +Y P H ++ GI +++ +Q E
Sbjct: 216 LIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGI-ELLTKFLQYES 274
Query: 281 ELRFSAESYLQN 292
+ R SAE +++
Sbjct: 275 KKRISAEEAMKH 286
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 4e-04
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 75 IRET--FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEK--KWLA 130
IRE + + H ++ Q ++K YL+ +Y L+ + + P + + K
Sbjct: 49 IREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYL 108
Query: 131 FQLLLAVKQCHEKGICHGDIKCENVLVT-SWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189
+Q+L + CH + H D+K +N+L+ N L L+DF + IP F+
Sbjct: 109 YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV---RTFTHEVV 165
Query: 190 TGGKRLCYLAPE-----RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
T L Y APE R Y +DI++VGC+ AE+ + P F
Sbjct: 166 T----LWYRAPEILLGSRHYS--------------TPVDIWSVGCIFAEMVNQKPLF 204
|
Length = 294 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 4e-04
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 31 EVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVW 88
+V+G F K +L K D VKV K+ ++ +E + + +++ HP +
Sbjct: 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKK-IVLNRKEQKHIMAERNVLLKNVKHPFLV 59
Query: 89 AFQF-WQETDKAAYLLR-----QYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
+ +Q T+K ++L + FF+ R+R P ++ A ++ A+ H
Sbjct: 60 GLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEP-----RARFYAAEIASALGYLHS 114
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
I + D+K EN+L+ S + L+DF K D + F G YLAPE
Sbjct: 115 INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTF-----CGTPE--YLAPE- 166
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
V + P ++D + +G V+ E+ +P F
Sbjct: 167 ---------VIRKQPYDNTVDWWCLGAVLYEMLYGLPPF 196
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 5e-04
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 115 LSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174
+ +P L+ ++ +Q+L +K H + H D+K N+LV S L + DF +
Sbjct: 94 IKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153
Query: 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234
D+ + + T R Y APE + + ++DI++VGC+ AEL
Sbjct: 154 DPDEDEKGFLTEYVVT---RW-YRAPEL-------LLSSSR--YTKAIDIWSVGCIFAEL 200
Query: 235 FLEVPFF 241
P F
Sbjct: 201 LTRKPLF 207
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 7e-04
Identities = 43/139 (30%), Positives = 60/139 (43%), Gaps = 28/139 (20%)
Query: 127 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186
K + FQLL + H + H D+K +N+LVTS + L+DF Y F
Sbjct: 113 KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG-LARIY-------SFQM 164
Query: 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL 246
+ L Y APE +Q + P+ D+++VGC+ AE+F P F
Sbjct: 165 ALTSVVVTLWYRAPEVL------LQSSYATPV----DLWSVGCIFAEMFRRKPLF----- 209
Query: 247 LAYRRGQYDPSQHLEKIPD 265
RG D Q L KI D
Sbjct: 210 ----RGSSDVDQ-LGKILD 223
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 0.001
Identities = 41/119 (34%), Positives = 50/119 (42%), Gaps = 27/119 (22%)
Query: 121 LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF--ASF----KPT 174
L L + +A QLL A+ H +GI H DIK ENVLV + L DF A F T
Sbjct: 257 LGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316
Query: 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233
Y + DT APE V P PS+DI++ G VI E
Sbjct: 317 PFHY----GIAGTVDTN-------APE----------VLAGDPYTPSVDIWSAGLVIFE 354
|
Length = 461 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 42.5 bits (100), Expect = 0.001
Identities = 62/296 (20%), Positives = 113/296 (38%), Gaps = 67/296 (22%)
Query: 9 TQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLR 66
T+ + + L D + E LG F + + KH +K K+ + + ++
Sbjct: 8 TKPDTSSWKLSDFE------MGETLGTGSFGRVRIAKHKGTGEYYAIKC-LKKREILKMK 60
Query: 67 EYERRLFHI---RETFRSIDHPHVWAFQFWQETDKAAYLLRQY-----FFNSLRDRLSTP 118
+ + H+ + + HP + + + Y L ++ F LR
Sbjct: 61 QVQ----HVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLR---KAG 113
Query: 119 PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178
F + V K + A +L+LA + H K I + D+K EN+L+ + + ++DF K
Sbjct: 114 RFPNDVAKFYHA-ELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKV---- 168
Query: 179 DDPSDFSFFFDTGGKRLC----YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234
D +F LC YLAPE V Q ++D + +G ++ E
Sbjct: 169 ---PDRTF-------TLCGTPEYLAPE----------VIQSKGHGKAVDWWTMGVLLYEF 208
Query: 235 FLEV-PFFELSHLLAYRR---GQYDPSQHLEKIP---DSGIRKMILHMIQLEPELR 283
PFF+ + Y + G+ K P D R ++ ++Q + R
Sbjct: 209 IAGYPPFFDDTPFRIYEKILAGRL-------KFPNWFDGRARDLVKGLLQTDHTKR 257
|
Length = 329 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 34/178 (19%)
Query: 120 FLSLVEKK--------WLAF-QLLLAVKQCH-EKGICHGDIKCENVLVTSWNWLYLSDFA 169
F SL EKK W F Q++LA++ H EK I H D+ N+++ + + ++DF
Sbjct: 100 FNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFG 159
Query: 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGC 229
K S G L Y PE + ++ P D++A GC
Sbjct: 160 LAK-------QKQPESKLTSVVGTIL-YSCPE----------IVKNEPYGEKADVWAFGC 201
Query: 230 VIAEL-FLEVPFFELSHL-LAYR--RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELR 283
++ ++ L+ PF+ + L LA + Y+P E + + +I + + E R
Sbjct: 202 ILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLP--EGMYSEDVTDVITSCLTPDAEAR 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 29/122 (23%)
Query: 134 LLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK--------PTYIPYDDPSDFS 185
+LA++ H GI H D+K +N+L+TS + L+DF K Y + + D
Sbjct: 111 VLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIE-KDTR 169
Query: 186 FFFDTGGKRLC----YLAPERFYEHG-GEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VP 239
F D K++C Y+APE G G KP +D +A+G ++ E + VP
Sbjct: 170 EFLD---KQVCGTPEYIAPEVILRQGYG----------KP-VDWWAMGIILYEFLVGCVP 215
Query: 240 FF 241
FF
Sbjct: 216 FF 217
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 41/223 (18%)
Query: 32 VLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETF-RSIDHPHVW 88
V+G F K +L KH D VKV K+ I ++ ++ + R +++ HP +
Sbjct: 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKK--AILKKKEQKHIMAERNVLLKNVKHPFLV 59
Query: 89 AFQF-WQETDKAAYLLR-----QYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
+ +Q DK ++L + FF+ R+R ++ A ++ A+ H
Sbjct: 60 GLHYSFQTADKLYFVLDYVNGGELFFHLQRER-----SFPEPRARFYAAEIASALGYLHS 114
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC----YL 198
I + D+K EN+L+ S + L+DF K S F C YL
Sbjct: 115 LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTF-----------CGTPEYL 163
Query: 199 APERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
APE V + P ++D + +G V+ E+ +P F
Sbjct: 164 APE----------VLRKQPYDRTVDWWCLGAVLYEMLYGLPPF 196
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.002
Identities = 57/253 (22%), Positives = 105/253 (41%), Gaps = 29/253 (11%)
Query: 45 KHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQE--TDKAAYL 102
KH V VK+ +DLR+ +RR E D+ H + ++ + ++
Sbjct: 43 KHSGRQVAVKM-------MDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWV 95
Query: 103 LRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW 162
L ++ + + L+ + + +L A+ H +G+ H DIK +++L+T
Sbjct: 96 LMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGR 155
Query: 163 LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222
+ LSDF I D P S ++APE V P +
Sbjct: 156 VKLSDFGFC--AQISKDVPKRKSLVGTP-----YWMAPE----------VISRTPYGTEV 198
Query: 223 DIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLEKIPDSG--IRKMILHMIQLE 279
DI+++G ++ E+ E P+F S + A +R + P L+ +R + M+ E
Sbjct: 199 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTRE 258
Query: 280 PELRFSAESYLQN 292
P+ R +A+ L +
Sbjct: 259 PQERATAQELLDH 271
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 56/228 (24%), Positives = 85/228 (37%), Gaps = 54/228 (23%)
Query: 40 KSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWA-FQFWQETDK 98
K I + E LVLVK K D E+ R L + FR + H +V +E +
Sbjct: 27 KGIEEEGGETLVLVKALQKTKDENLQSEFRREL----DMFRKLSHKNVVRLLGLCREAEP 82
Query: 99 AAYL--------LRQYF-FNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGD 149
+ L+Q+ +D PP LS +K L Q+ L + H D
Sbjct: 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRD 142
Query: 150 IKCENVLVTSWNWL-----------YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYL 198
+ N LV+S + Y S++ + IP L +L
Sbjct: 143 LAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIP-----------------LRWL 185
Query: 199 APERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELS 244
APE E D K D+++ G ++ E+F E+PF+ LS
Sbjct: 186 APEAVQE--------DDFSTKS--DVWSFGVLMWEVFTQGELPFYGLS 223
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 60/188 (31%)
Query: 128 WLAF-QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSD-----FASFKPTY------ 175
W F QL A++ H K I H DIK NV +T+ + L D F S K T
Sbjct: 109 WKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVG 168
Query: 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235
PY Y++PER +E+G + DI+++GC++ E+
Sbjct: 169 TPY------------------YMSPERIHENGYNFK----------SDIWSLGCLLYEMA 200
Query: 236 -LEVPFF-ELSHLLAY----RRGQYDP------SQHLEKIPDSGIRKMILHMIQLEPELR 283
L+ PF+ + +L + + Y P S+ L R ++ I +PE R
Sbjct: 201 ALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEEL--------RDLVSRCINPDPEKR 252
Query: 284 FSAESYLQ 291
LQ
Sbjct: 253 PDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.002
Identities = 53/251 (21%), Positives = 93/251 (37%), Gaps = 49/251 (19%)
Query: 75 IRET--FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLS-TPPFLSLVEKKWLAF 131
IRE + + H ++ T+K+ L+ +Y L+ L +++ K F
Sbjct: 52 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLF 111
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 191
QLL + CH + + H D+K +N+L+ L L+DF + IP S+
Sbjct: 112 QLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVV----- 166
Query: 192 GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF------ELSH 245
L Y P+ G + +D++ VGC+ E+ P F E H
Sbjct: 167 --TLWYRPPDILL---GSTDYST------QIDMWGVGCIFYEMSTGRPLFPGSTVEEQLH 215
Query: 246 LL----------------------AYRRGQYDPSQHLEKIP--DSGIRKMILHMIQLEPE 281
+ +Y +Y P DS +++ ++Q E
Sbjct: 216 FIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGR 275
Query: 282 LRFSAESYLQN 292
R SAE +++
Sbjct: 276 KRISAEEAMKH 286
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 0.002
Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 31/159 (19%)
Query: 87 VWAFQFWQETDKAAYLLRQYF----FNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
++AFQ D+ YL +Y F +L L+ LS ++ ++ AV HE
Sbjct: 67 LYAFQ----DDEYLYLAMEYVPGGDFRTL---LNNLGVLSEDHARFYMAEMFEAVDALHE 119
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
G H D+K EN L+ + + L+DF K + Y + S Y+APE
Sbjct: 120 LGYIHRDLKPENFLIDASGHIKLTDFGLSKGI-VTYANSVVGSPD---------YMAPEV 169
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
G + V D +++GC++ E P F
Sbjct: 170 LRGKGYDFTV----------DYWSLGCMLYEFLCGFPPF 198
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.002
Identities = 62/235 (26%), Positives = 102/235 (43%), Gaps = 43/235 (18%)
Query: 26 NLVLKEVLGGSRFFKSILCK----HDEG-LVLVKVY-----FKRGDYIDLREYERR-LFH 74
N L +VLG + K L + HD G L +KV ++ ++ ER L H
Sbjct: 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEH 60
Query: 75 IRET-FRSIDHPHVWAFQFWQETDKAAYLLRQY-----FFNSLRDRLSTPPFLSLVEKKW 128
+R++ F H +AFQ T+ +L+ Y F L R S E ++
Sbjct: 61 VRQSPFLVTLH---YAFQ----TEAKLHLILDYVSGGEMFTHLYQR----DNFSEDEVRF 109
Query: 129 LAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFF 188
+ +++LA++ H+ GI + DIK EN+L+ S + L+DF K ++ + +SF
Sbjct: 110 YSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSK-EFLSEEKERTYSFCG 168
Query: 189 DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL 243
Y+APE GG + +D +++G +I EL F L
Sbjct: 169 TIE-----YMAPEIIRGKGGHGKA---------VDWWSLGILIFELLTGASPFTL 209
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.002
Identities = 55/227 (24%), Positives = 90/227 (39%), Gaps = 49/227 (21%)
Query: 32 VLGGSRFFKSILC--KHDEGLVLVKVYFKRGDYIDLREY-----ERRLFHIRETFRSIDH 84
VLG F K +L K L +K K+GD I E E+R+F ET S H
Sbjct: 6 VLGRGHFGKVLLAEYKKTGELYAIKA-LKKGDIIARDEVESLMCEKRIF---ETANSERH 61
Query: 85 PHVWAFQFWQETDKAAYLLRQY------FFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVK 138
P + +T+ + +Y + D S P + A ++L ++
Sbjct: 62 PFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDVFSEP------RAVFYAACVVLGLQ 115
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC-- 196
HE I + D+K +N+L+ + ++ ++DF K D S F C
Sbjct: 116 YLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTF-----------CGT 164
Query: 197 --YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240
+LAPE V + ++D + +G +I E+ + E PF
Sbjct: 165 PEFLAPE----------VLTETSYTRAVDWWGLGVLIYEMLVGESPF 201
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.002
Identities = 35/129 (27%), Positives = 54/129 (41%), Gaps = 24/129 (18%)
Query: 107 FFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLS 166
+F+S + S + FQLL + CH + H D+K +N+L+ L L+
Sbjct: 88 YFDSCNGDIDPEIVKSFM------FQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLA 141
Query: 167 DFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPL-KPSMDIF 225
DF + IP +S T L Y P+ V A L S+D++
Sbjct: 142 DFGLARAFGIPV---RCYSAEVVT----LWYRPPD----------VLFGAKLYSTSIDMW 184
Query: 226 AVGCVIAEL 234
+ GC+ AEL
Sbjct: 185 SAGCIFAEL 193
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 0.003
Identities = 42/226 (18%), Positives = 89/226 (39%), Gaps = 37/226 (16%)
Query: 31 EVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAF 90
++LG F K IL + + + + I ++ ++ HP + A
Sbjct: 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTAL 60
Query: 91 QF-WQETDKAAYLLR-----QYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG 144
++ +Q D+ +++ + FF+ R+R+ + ++ +++ A+ H
Sbjct: 61 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSED-----RARFYGAEIVSALGYLHSCD 115
Query: 145 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC----YLAP 200
+ + D+K EN+++ + ++DF K S K C YLAP
Sbjct: 116 VVYRDLKLENLMLDKDGHIKITDFGLCK---------EGISDGATM--KTFCGTPEYLAP 164
Query: 201 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH 245
E V +D ++D + +G V+ E+ +PF+ H
Sbjct: 165 E----------VLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 200
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 41.2 bits (96), Expect = 0.003
Identities = 45/180 (25%), Positives = 71/180 (39%), Gaps = 32/180 (17%)
Query: 79 FRSIDHPHVWAFQ--FWQETDKAAYLLRQYF---------FNSLRDRLSTPPFLSLVEKK 127
R + HP+V A Q F +D+ +LL Y F+ P L K
Sbjct: 52 LRELKHPNVIALQKVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVK 111
Query: 128 WLAFQLLLAVKQCHEKGICHGDIKCENVLVT----SWNWLYLSDFASFKPTYIPYDDPSD 183
L +Q+L + H + H D+K N+LV + ++D
Sbjct: 112 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG-------------- 157
Query: 184 FSFFFDTGGKRLCYLAP--ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
F+ F++ K L L P F+ E+ + K ++DI+A+GC+ AEL P F
Sbjct: 158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTK-AIDIWAIGCIFAELLTSEPIF 216
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|202500 pfam02985, HEAT, HEAT repeat | Back alignment and domain information |
|---|
Score = 36.3 bits (85), Expect = 0.003
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 539 VLPHVIAMLSDPAAIVRCAALETLCDILPLV 569
+LP ++ +L+DP VR AA E L + ++
Sbjct: 1 LLPLLLELLNDPDPEVREAAAEALGALAEVL 31
|
The HEAT repeat family is related to armadillo/beta-catenin-like repeats (see pfam00514). Length = 31 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.004
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 39/209 (18%)
Query: 128 WLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187
+L +Q+L +K H GI H D+K N++V S L + DF + + SF
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--------TAGTSFM 174
Query: 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL 247
Y APE G K ++DI++VGC++ E+ + H +
Sbjct: 175 MTPYVVTRYYRAPEVILGMG----------YKENVDIWSVGCIMGEM--------VRHKI 216
Query: 248 AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN---YAAVVFPTYFSP 304
+ Y K+ + M +L+P +R +Y++N YA + FP F
Sbjct: 217 LFPGRDY--IDQWNKVIEQLGTPCPEFMKKLQPTVR----NYVENRPKYAGLTFPKLFPD 270
Query: 305 FLHNFYCCWNPLHSDMRVAMCRSVFPEIL 333
L + H+ ++ + R + ++L
Sbjct: 271 SLFPA----DSEHNKLKASQARDLLSKML 295
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.004
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 22/164 (13%)
Query: 77 ETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTP-PF-LSLVEKKWLAFQL 133
ET + +DH ++ + ++ T++ + +Y S+ L T F LV ++ Q+
Sbjct: 60 ETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLV--RFFTEQV 117
Query: 134 LLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK 193
L + H KGI H D+K +N+LV + +SDF K + YD+ + S
Sbjct: 118 LEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSM-----QG 172
Query: 194 RLCYLAPE--RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235
+ ++APE Y G +V DI+++GCV+ E+F
Sbjct: 173 SVFWMAPEVIHSYSQGYSAKV----------DIWSLGCVVLEMF 206
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.004
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 25/131 (19%)
Query: 132 QLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 191
Q+L + H +GI H DIK N+LV + + +SDF K S T
Sbjct: 114 QILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEAN-------SLSTKTN 166
Query: 192 GKR------LCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-PFFELS 244
G R + ++APE V + DI+++GC++ E+ PF + +
Sbjct: 167 GARPSLQGSVFWMAPE----------VVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT 216
Query: 245 HLLA-YRRGQY 254
L A ++ G+
Sbjct: 217 QLQAIFKIGEN 227
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1553 | |||
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 100.0 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.98 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.98 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.98 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.98 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.98 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.98 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.98 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.98 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.98 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.98 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.98 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.98 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.98 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.98 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.98 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.98 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.98 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.98 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.98 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.98 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.98 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.98 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.98 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.98 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.98 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.98 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.98 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.98 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.98 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.98 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.98 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.97 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.97 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.97 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.97 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.97 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.97 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.97 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.97 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.97 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.97 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.97 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.97 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.97 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.97 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.97 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.97 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.97 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.97 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.97 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.97 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.97 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.97 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.97 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.97 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.97 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.97 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.97 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.97 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.97 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.97 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.97 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.97 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.97 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.97 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.97 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.97 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.97 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.97 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.97 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.97 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.97 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 99.97 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.97 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.97 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.97 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.97 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.97 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.97 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.97 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.97 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.97 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.97 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.97 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.97 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.97 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.97 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.97 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.97 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.97 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.97 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.97 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.97 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.97 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.97 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.97 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.97 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.97 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.97 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.97 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.97 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.97 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.97 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.97 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.97 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.97 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.97 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.97 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.97 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.97 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.97 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.97 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.97 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.97 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.97 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.97 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.97 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.97 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.97 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.97 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.97 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.97 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.97 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.96 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.96 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.96 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.96 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.96 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.96 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.96 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.96 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.96 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.96 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.96 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.96 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.96 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.96 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.96 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.96 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.96 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.96 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.96 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.95 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.95 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.95 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.95 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.95 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.95 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.95 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.95 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.95 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.95 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.94 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.94 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.94 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.94 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.94 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.94 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.94 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.94 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.94 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.94 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.94 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.94 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.94 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.94 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.93 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.93 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.93 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.93 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.93 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.93 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.93 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.92 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.92 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.92 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.92 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.92 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.92 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 99.92 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.92 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.92 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.92 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.91 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.91 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.91 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.91 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.91 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.9 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.9 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.9 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.9 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.9 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.9 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.9 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.9 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.9 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.9 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.89 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.89 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.89 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.89 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.89 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.89 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.89 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 99.89 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.88 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.88 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.88 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.88 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.88 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.88 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.88 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.88 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.88 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.88 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 99.87 | |
| PTZ00421 | 493 | coronin; Provisional | 99.87 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.87 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.87 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.87 | |
| PTZ00420 | 568 | coronin; Provisional | 99.87 | |
| PTZ00421 | 493 | coronin; Provisional | 99.87 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.87 | |
| KOG1036 | 323 | consensus Mitotic spindle checkpoint protein BUB3, | 99.87 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.87 | |
| PTZ00420 | 568 | coronin; Provisional | 99.86 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.86 | |
| KOG4283 | 397 | consensus Transcription-coupled repair protein CSA | 99.86 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.86 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.85 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.85 | |
| KOG0639 | 705 | consensus Transducin-like enhancer of split protei | 99.85 | |
| KOG0294 | 362 | consensus WD40 repeat-containing protein [Function | 99.85 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.85 | |
| KOG0301 | 745 | consensus Phospholipase A2-activating protein (con | 99.85 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.85 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.85 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.84 |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-220 Score=1973.51 Aligned_cols=1405 Identities=40% Similarity=0.614 Sum_probs=1034.7
Q ss_pred CCCccccCccccccccccccCCCccceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHh
Q 000410 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFR 80 (1553)
Q Consensus 1 Mgn~~s~~~~~~~~~~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~ 80 (1553)
||||++.|+|+.+++.|+.++.. +|.+.+.||+++|.+|++|++++|.|+||||.++++..+++.+.++++++. ..
T Consensus 1 MGnqls~~sQi~~~e~yfsd~~~--e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik--~~ 76 (1431)
T KOG1240|consen 1 MGNQLSLPSQISPVEVYFSDLSV--ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK--FA 76 (1431)
T ss_pred CCcccccccccchHHHHhhcCcc--ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH--HH
Confidence 99999999999999999999987 788999999999999999999999999999999998999999999998876 56
Q ss_pred cCCCCCeeEEEEEEEeCCEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC
Q 000410 81 SIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 160 (1553)
Q Consensus 81 ~l~hpnIv~~~~~~~~~~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~ 160 (1553)
.++|||+++|..+.+++++.|||++|+..+|+|+++.||+|...|++||++||+.||..||..||+|||||.|||||++|
T Consensus 77 l~~~pn~lPfqk~~~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW 156 (1431)
T KOG1240|consen 77 LMKAPNCLPFQKVLVTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW 156 (1431)
T ss_pred hhcCCcccchHHHHHhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCC-CCCcccHHHHHHHHHHHHcC-C
Q 000410 161 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP-LKPSMDIFAVGCVIAELFLE-V 238 (1553)
Q Consensus 161 ~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~-~t~~~DIwSlG~il~eLltg-~ 238 (1553)
+|+.|+||..+||+++|+++|++|.++|+|..++.||+|||+|....+..+..+... ++++|||||+||+++||++. +
T Consensus 157 NW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~ 236 (1431)
T KOG1240|consen 157 NWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGR 236 (1431)
T ss_pred chhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999987665444455555 89999999999999999986 9
Q ss_pred CCCCchHHHHHHhc-CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCchhhhhhccCCCCC
Q 000410 239 PFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLH 317 (1553)
Q Consensus 239 ~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~fl~~~~~~~~~~~ 317 (1553)
|+|+++++.+|+.+ .+.+...++++.+..+++||..|++.||.+|.+|+++|+++++.+||+|||+|||+|+..+.++.
T Consensus 237 PlF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~FL~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 237 PLFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSFLYDYLDRFVPLT 316 (1431)
T ss_pred CcccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHHHHHHHHhcCCcc
Confidence 99999999999998 55666788999999999999999999999999999999999999999999999999999998877
Q ss_pred CcchhhhhccchHHHHHhhcCCCCCCCCCCCCCCCCcCCchhhHHHHHHHHhHHHHHHHhhHHHHHhhhccccchhcccc
Q 000410 318 SDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGD 397 (1553)
Q Consensus 318 ~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (1553)
....+.. .-+.+...++. ++..++-.++ ...|
T Consensus 317 ~~~p~~~----------~~~~gs~i~d~------------~~~~~~p~n~--------------------------~~~~ 348 (1431)
T KOG1240|consen 317 TSTPISD----------NTCTGSTIEDN------------VKLLDGPTNK--------------------------IYRD 348 (1431)
T ss_pred ccCcccc----------ccccCcccccc------------cccccCcccc--------------------------hhhh
Confidence 3322221 11111111111 0000000011 1234
Q ss_pred ccccccCCCCCCccCCCCCCCCCCCCCcccccccCccccccchhhhhhhhhhhcCCCCcccccccccccccccccCCCCC
Q 000410 398 ISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSD 477 (1553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (1553)
+..+|+.......+. .+. ..+.++.+..+.+....+.+++.......++-.....|++.++
T Consensus 349 ~~~~~h~ln~~~~~~-----------------~~~--~~S~De~~~~~~~al~~~r~~~~~l~~~~dl~~~~q~~~~~~~ 409 (1431)
T KOG1240|consen 349 FSQICHCLNFPLIKD-----------------GGT--ITSSDEIIDSISKALEFSRHLIENLDVIQDLKPEKQLWTARSS 409 (1431)
T ss_pred hhccccccccccccc-----------------ccc--ccCCcHHHHHHHHHHhhhhhhcccchhhhccchHHhcccccCC
Confidence 444555444221110 000 0122333333333332222233322222222122224444332
Q ss_pred CCCCCCCCCCCCCccccceehhhHHHHhhhcccCCchhHHHHHHHHHHHhccCCcccccccccceeeecccCCCchhHHH
Q 000410 478 TFGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCA 557 (1553)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~i~l~~i~s~~R~~~~~~sk~~al~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~ 557 (1553)
.+ ....+++|++||+++||||||+++.+++|++||+||..||+|++||.||||||||+|+|+.|+.+.|||+
T Consensus 410 ~~--------~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~ 481 (1431)
T KOG1240|consen 410 PN--------IKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRAT 481 (1431)
T ss_pred cc--------cCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHH
Confidence 21 1246789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccCCCCCCccccccccccCCCCCC-CCchhhHHHHhhHHHHHHHHHHHHHHHHHhhhcccccccCCC
Q 000410 558 ALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDD-PEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAP 636 (1553)
Q Consensus 558 al~~l~~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d-~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~ 636 (1553)
||+|||++|.+|+.+||+|+|||||||||.|++|+.| ...+||+|||+||+.||.||.||||.+|.++..|.++..+++
T Consensus 482 Al~Tlt~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nse 561 (1431)
T KOG1240|consen 482 ALETLTELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSE 561 (1431)
T ss_pred HHHHHHHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccc
Confidence 9999999999999999999999999999999999999 789999999999999999999999999999988877654321
Q ss_pred CCCCCCCCccchhhhccchHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHhcccchhcccCccccccccccccccccc
Q 000410 637 HKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLN 716 (1553)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ll~~~~~~~~vk~all~~i~~Lc~FfG~~ktnd~iL~hlit~LN 716 (1553)
+ ..+. ++++++++|++.+++.|++||+ |+++.||||||++|.+||+||||+|+||+||||||||||
T Consensus 562 ---------t-~~~~--~~~~~~~~L~~~V~~~v~sLls--d~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLN 627 (1431)
T KOG1240|consen 562 ---------T-APEQ--NYNTELQALHHTVEQMVSSLLS--DSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLN 627 (1431)
T ss_pred ---------c-cccc--ccchHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhc
Confidence 0 1222 3467999999999999999999 467999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhccceeeeeeccchhhHhHHHHHHhhcCCCchHHHHHHHHHHHHHHHcCCCchHHHHHHHHhhcccccC
Q 000410 717 DRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCY 796 (1553)
Q Consensus 717 d~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~ee~Vv~~~l~~l~~l~~~gl~~k~~~~~~~~~~~~ll~H 796 (1553)
||||+||+||||+|+|||.||||+|+|+||||||+|||+|+||+||++||+||+.|||+|||+|+++.|++..|+|||||
T Consensus 628 DkDw~LR~aFfdsI~gvsi~VG~rs~seyllPLl~Q~ltD~EE~Viv~aL~~ls~Lik~~ll~K~~v~~i~~~v~PlL~h 707 (1431)
T KOG1240|consen 628 DKDWRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQQGLTDGEEAVIVSALGSLSILIKLGLLRKPAVKDILQDVLPLLCH 707 (1431)
T ss_pred CccHHHHHHHHhhccceEEEEeeeeHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHhcccchHHHHHHHHhhhhheeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHhhcCCccceeEEEeeccccccccCCCccCCHHHHHhccCCCCcHHHHHHHHHHhh-hchHHHHH
Q 000410 797 PSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENAR-SSDMLERQ 875 (1553)
Q Consensus 797 Pn~wiR~~~~~~i~~~~~~l~~ad~~c~l~P~~~p~l~~~~~~~~~~~~ll~~l~~p~sr~v~~~~~~~~~-~~~~~~~~ 875 (1553)
||.|||+++++||++++++|+.|||||+|||+|||||+.++.++.+++.|++||||||||+||+++++|.. ...-..-+
T Consensus 708 PN~WIR~~~~~iI~~~~~~ls~advyc~l~P~irpfl~~~v~~i~s~~~LlsclkpPVsRsv~~~l~r~~~ens~f~k~l 787 (1431)
T KOG1240|consen 708 PNLWIRRAVLGIIAAIARQLSAADVYCKLMPLIRPFLERPVIQIESKEVLLSCLKPPVSRSVFNQLLRWSDENSSFWKKL 787 (1431)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhhheEEeehhhHHhhhccHhhhcchHHHHHHhcCCCcHHHHHHHHHHhhcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999986 22222333
Q ss_pred hhhhcccCCCChhhhhHHhhhcCCCcccccccCCcccCCcCCCCCCCCCCCCCcccCCCcC--------hhhhHhhcccc
Q 000410 876 RKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDN--------DGAKLRTLGSL 947 (1553)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~kl~~~~~~ 947 (1553)
+..|+..+.+++.|..++...+..+...+-.....+ .+..+....-+-.++.++ +.|+..+++.+
T Consensus 788 ~~~~~~s~~~s~d~~~~~~~~k~~g~l~~~e~~~~~-------~~~~~~~~~i~S~~~~e~~e~~l~~k~~~~~~~r~~~ 860 (1431)
T KOG1240|consen 788 LERHYSSSGNSRDEFIKNYSSKRYGFLPFEEGAGSS-------KWSNTGFKKIKSEGKTELVEDKLLEKDIFLIRSRKPK 860 (1431)
T ss_pred HHHhhhccCccchhhhhcchhhhcccCCccccccch-------hhhhhhcceeeccccccccccccchhchhhhcccCCc
Confidence 445555555555554322211111111111111100 011000000011133333 33444444332
Q ss_pred hhccCccccCCCCCCC-ccccccccccccccccCccccCCCCCCCCcccccccccccCCCCCcCcccccccccccCCCCC
Q 000410 948 VYNASSMADIRDPLCP-EKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTM 1026 (1553)
Q Consensus 948 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1553)
........ ..+...+ +.....++...++...+... .+..++..++..+....++.+.........+.+.+++.+.
T Consensus 861 ~~~s~~~~-l~d~~~~~~~~~~~~v~~~~~n~~~t~~---~P~~~~~~~~~~d~n~~~~~~~~~~~~n~~~~l~~~~~~~ 936 (1431)
T KOG1240|consen 861 SNISNRVL-LDDPAYPRNTNGREGVLTRQVNLVGTII---EPSNIHARVRRKDSNREGNESNMESPQNSKHLLPIGSPNK 936 (1431)
T ss_pred cchhhhhh-hcCcccccccCCceeeeccccccccccc---ccccchhhhhhhhccccCCCccccCCCcchhhccCCCCCc
Confidence 11111110 0111111 11111222222221111111 1222333333333222111111000111111122222111
Q ss_pred CCCccccCCCCC-CCCCCCCC-cccCCcccCCCCCccceeeccCCCCCcccc-ccccccCCCCCCCCccccccccccCCC
Q 000410 1027 PWMDTTNQSFSL-ASSVPPPN-LVSGSFSISNGSKQFYRVVHEPEGRENDQM-ASVNCKFPEMGTSGTAKGSSINVEDAS 1103 (1553)
Q Consensus 1027 ~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1553)
.|.+ |..... .......+ +.++++.........+.+.+.+.++.+... ..+.+.....+.............+..
T Consensus 937 ~~~~--~~~~~t~~~~~~~vp~~ts~~~~~~t~~~~~~~~~p~~ns~~~~~~~r~~~~~~dL~~~~~~~~~~~ss~~~s~ 1014 (1431)
T KOG1240|consen 937 LNHT--GSPRSTLLLDGNSVPTLTSSSVRVVTNLKPTKPVMPVPNSTANNQVERSLTCLNDLEMLTVSIPKRPSSESISH 1014 (1431)
T ss_pred cccc--CCCcccccccCCccceeeccceeeeeccCCcccccccCCCCcccchhHHHHHHHhhhhhhhhcccccchhhccc
Confidence 1111 110000 00000001 111122111111111122222322222111 111111111111111111111111110
Q ss_pred CCCCCCCCCCcccccCCCCCCcccCccEeeeccccccCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCccc-cccccce
Q 000410 1104 SPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKD-ISFRSRL 1181 (1553)
Q Consensus 1104 ~~~~~~g~~~~~~~~~~~~~~W~p~G~lv~~l~~H~~~V~~l~~spd~-~~laSgS~DGtVkIWD~~~~~~~-~~~~~~~ 1181 (1553)
+....+-|.... .+.++.+|+|+|.+|+||+||+.+|+.++.++++ .+|+|||+||||||||+++.++. .+.++++
T Consensus 1015 -p~~~~~ep~~~~-~~~p~~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~l 1092 (1431)
T KOG1240|consen 1015 -PCLLNSEPSAWS-VGSPPPGWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSEL 1092 (1431)
T ss_pred -hhhhccCCchhh-cCCCCCCCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeE
Confidence 000111111111 1355778999999999999999999999998766 89999999999999999998866 7889999
Q ss_pred eeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceec-ccCCCcEEEEEEecCCCCcceE
Q 000410 1182 TYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKK-DTKEGAIVTLVNYNTDNCASHM 1260 (1553)
Q Consensus 1182 ~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~s~~~ 1260 (1553)
+|...++++.++.++++++.+|+|+.||.|++.+++... ..++... ..+.. ....|..|.+.+|.....+ ..
T Consensus 1093 tys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~-----~~~~~~~-~~ri~n~~~~g~vv~m~a~~~~~~S-~~ 1165 (1431)
T KOG1240|consen 1093 TYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYN-----VSKRVAT-QVRIPNLKKDGVVVSMHAFTAIVQS-HV 1165 (1431)
T ss_pred EEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccc-----cccceee-eeecccccCCCceEEeecccccccc-ee
Confidence 999888899999999999999999999999999998421 1222222 22332 3345678888888877543 59
Q ss_pred EEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEE
Q 000410 1261 FMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1340 (1553)
Q Consensus 1261 l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~ 1340 (1553)
++++|..+.|..||+|+...+|+++++..+|.|++++.||.++|++.||+.|.+.+||+||+.++.+|.+++..+|+++.
T Consensus 1166 lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~ 1245 (1431)
T KOG1240|consen 1166 LVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVW 1245 (1431)
T ss_pred EEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCCccccCCCCEEEEEE-cCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccc
Q 000410 1341 LFVPPPNAAVSTTARPLIYVAA-GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQK 1419 (1553)
Q Consensus 1341 ~~~p~~~~~~~s~~~~~l~s~s-~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1419 (1553)
. +|.... ....+.+++ +.++|.+|++++|.|..+++.++. .+ .+.+. .|...
T Consensus 1246 ~-~~~~~~-----~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~--~p---~ls~~--~Ps~~-------------- 1298 (1431)
T KOG1240|consen 1246 L-CPTYPQ-----ESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDG--AP---ILSYA--LPSND-------------- 1298 (1431)
T ss_pred e-eccCCC-----CceEEEecccCCCceeeeecccCcceEEEEcCCC--Cc---chhhh--ccccc--------------
Confidence 8 554320 122344444 688999999999999999997733 11 11111 11110
Q ss_pred ccccccCCCCCCccCcEEeccCCCCeEEEccCCCeEEEEeCCCCCCc-eEEeCCCCCCCCCCccEEEeecCCeEEEEeee
Q 000410 1420 YRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRS-YCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498 (1553)
Q Consensus 1420 ~~~~~l~~~~~~~~~V~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 1498 (1553)
...++...++.|....+++.++|||+|++||.||...++.+ +.+.|+.........+|..+...|.++++|..
T Consensus 1299 ------~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i 1372 (1431)
T KOG1240|consen 1299 ------ARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFI 1372 (1431)
T ss_pred ------CCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhh
Confidence 00123344677777778889999999999999999999998 77777766555667789999999999999865
Q ss_pred cCCcchhhh----HHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1499 RQPLTSKLT----AKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1499 ~~~~~~~~~----~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
..+.+...+ .....+........+|+|.|+|++.+..++.+||++|+||+|||||
T Consensus 1373 ~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1373 IYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred hhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 444322222 1112222234456789999999988888899999999999999997
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-43 Score=464.10 Aligned_cols=308 Identities=14% Similarity=0.184 Sum_probs=222.8
Q ss_pred eccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccc-cc-ccceeeecCCCceEEEEEec-CCcEEEEEeCCCc
Q 000410 1134 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI-SF-RSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGI 1210 (1553)
Q Consensus 1134 ~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~-~~-~~~~~~~~h~~~I~~l~f~~-~~~~las~s~DG~ 1210 (1553)
.+..|.+.|++++|+|++++|||||.||+|+|||........ .. ....... +...+.+++|++ +++.|++|+.||+
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence 455699999999999999999999999999999986432110 00 1122233 345699999987 4789999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
|++||+.+. ........|...|.+++|+|.. +.+|++|+.||.|++||++++.++.++.. .
T Consensus 557 v~lWd~~~~--------------~~~~~~~~H~~~V~~l~~~p~~--~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~---~ 617 (793)
T PLN00181 557 VQVWDVARS--------------QLVTEMKEHEKRVWSIDYSSAD--PTLLASGSDDGSVKLWSINQGVSIGTIKT---K 617 (793)
T ss_pred EEEEECCCC--------------eEEEEecCCCCCEEEEEEcCCC--CCEEEEEcCCCEEEEEECCCCcEEEEEec---C
Confidence 999999631 1112223567789999999742 56999999999999999999988887764 4
Q ss_pred cceEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCc-ccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000410 1291 GYVSSLVTG-PCGNWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368 (1553)
Q Consensus 1291 g~Itsl~~s-p~g~~LvsGs~dG~l~lWDlr~~~-~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~ 1368 (1553)
..|.+++|+ ++|.+|++|+.||.|++||++... ++..+. .|...|..+.| . ++.++++++.|+.|+
T Consensus 618 ~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~-~h~~~V~~v~f-~----------~~~~lvs~s~D~~ik 685 (793)
T PLN00181 618 ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI-GHSKTVSYVRF-V----------DSSTLVSSSTDNTLK 685 (793)
T ss_pred CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec-CCCCCEEEEEE-e----------CCCEEEEEECCCEEE
Confidence 679999995 578999999999999999999765 344444 46678888887 2 235799999999999
Q ss_pred EEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEE
Q 000410 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1447 (1553)
Q Consensus 1369 vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ll 1447 (1553)
+||+.++... . .. ..+....+|...+.++.|++++ .|+
T Consensus 686 iWd~~~~~~~-------~-~~---------------------------------~~l~~~~gh~~~i~~v~~s~~~~~la 724 (793)
T PLN00181 686 LWDLSMSISG-------I-NE---------------------------------TPLHSFMGHTNVKNFVGLSVSDGYIA 724 (793)
T ss_pred EEeCCCCccc-------c-CC---------------------------------cceEEEcCCCCCeeEEEEcCCCCEEE
Confidence 9999754200 0 00 0000112344467889999877 677
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccce
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1527 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1527 (1553)
+|+.|+.|++|+...+............ .+. ......|.+.|
T Consensus 725 sgs~D~~v~iw~~~~~~~~~s~~~~~~~-----------------~~~---------------------~~~~~~~~~~V 766 (793)
T PLN00181 725 TGSETNEVFVYHKAFPMPVLSYKFKTID-----------------PVS---------------------GLEVDDASQFI 766 (793)
T ss_pred EEeCCCEEEEEECCCCCceEEEecccCC-----------------ccc---------------------ccccCCCCcEE
Confidence 9999999999998755332211110000 000 00112367889
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1528 LSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1528 ~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.++ +|++++.+|++|+.||.|+||+
T Consensus 767 ~~v-~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 767 SSV-CWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred EEE-EEcCCCCeEEEecCCCcEEEEe
Confidence 999 7999999999999999999995
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-46 Score=414.54 Aligned_cols=252 Identities=26% Similarity=0.299 Sum_probs=216.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCH--HHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDL--REYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~--~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
.|.+.+.||+|+||.|-+|..+. +.||||++.++...... ..-...+++|+++|++++|||||+++++|+.++..|
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y 252 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY 252 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence 58899999999999999998764 67999999987322111 122334679999999999999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC---CcEEEeecCccccccCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW---NWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~---~~vkL~DFG~a~~~~~~ 177 (1553)
|||||++ |+|.+++-.++.+.+..-+.+++||+.||.|||++||+||||||||||++.+ -.+||+|||+||...
T Consensus 253 mVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g-- 330 (475)
T KOG0615|consen 253 MVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG-- 330 (475)
T ss_pred EEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc--
Confidence 9999999 6999999999999999999999999999999999999999999999999876 579999999999762
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHhc
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRRG 252 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~~ 252 (1553)
...+..|.||||.|.|||++...+.+ .+..++|||||||+||-+++|.|||..+ -..++.+|
T Consensus 331 ------~~sfm~TlCGTpsYvAPEVl~~kg~~-------~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G 397 (475)
T KOG0615|consen 331 ------EGSFMKTLCGTPSYVAPEVLASKGVE-------YYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG 397 (475)
T ss_pred ------cceehhhhcCCccccChhheecCCee-------cccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC
Confidence 23467899999999999999755432 3446999999999999999999999643 24567788
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.|...+......+++.++||.+||..||++|||++|+|+|
T Consensus 398 ~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 398 RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 8886654555556789999999999999999999999999
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=412.93 Aligned_cols=249 Identities=21% Similarity=0.267 Sum_probs=215.0
Q ss_pred cceEEEEEeeccCcEEEEEEEE-C-CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKH-D-EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~-~-~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
-+|+..+.||+|+|+++|.+++ . +..||+|++.+.. .......+++.+|+++.+.|+|||||+++++|++.+.+||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~--l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKL--LKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHH--hcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE
Confidence 4799999999999999999998 3 4679999998752 1223455678899999999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|.|+|. ++|..+++.++.++|.|++.+++||+.||.|||++||+|||||..|+|++++.+|||+|||+|.....+..
T Consensus 96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E-- 173 (592)
T KOG0575|consen 96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE-- 173 (592)
T ss_pred EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccc--
Confidence 999999 79999999999999999999999999999999999999999999999999999999999999987743322
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
...|.||||.|+|||++. ....+..+||||+|||||.|+.|+|||+...+....+........+|
T Consensus 174 -----rk~TlCGTPNYIAPEVl~----------k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P 238 (592)
T KOG0575|consen 174 -----RKKTLCGTPNYIAPEVLN----------KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP 238 (592)
T ss_pred -----ccceecCCCcccChhHhc----------cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc
Confidence 224778999999999875 34568899999999999999999999997766544333333333355
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+.++++||.+||+.||.+|||++++|.|
T Consensus 239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 5667899999999999999999999999998
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=382.40 Aligned_cols=244 Identities=21% Similarity=0.198 Sum_probs=212.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-EEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK-AAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~-~~~l 102 (1553)
+++..+.||+|..|+||+|+|+. ..+|+|++... ......+++.+|.++++.++|||||++|+.|..+. ..+|
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~----~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN----IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc----CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence 67788999999999999999974 56999999443 33567788999999999999999999999999988 5999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||+ |+|.+.+..-+.+++...-.|+.++++||.|||+ ++|+||||||+||||++.|.|||||||.++.....
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 999999 6999999988889999999999999999999996 99999999999999999999999999999866221
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHhc-CC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRRG-QY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~~-~~ 254 (1553)
...+..||..|||||++. +..|+.++||||||+++.|+++|+.||... ....+... ..
T Consensus 233 ------~a~tfvGT~~YMsPERi~----------g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~ 296 (364)
T KOG0581|consen 233 ------IANTFVGTSAYMSPERIS----------GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD 296 (364)
T ss_pred ------hcccccccccccChhhhc----------CCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc
Confidence 446778999999999885 457888999999999999999999888763 33333333 33
Q ss_pred CCCCCCCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+.+.++. ..++++++||..||++||.+||++.|+++|
T Consensus 297 ~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 297 EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 35555666 488999999999999999999999999998
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-42 Score=395.90 Aligned_cols=258 Identities=20% Similarity=0.287 Sum_probs=214.6
Q ss_pred CccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
...||.+++.||.|+|++|++|+... +.|||||+.|+. .-.+.-.+.+.+|.++|.+| .||.|++++..|+++..
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~--Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRY--IIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHH--HHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 33489999999999999999998864 679999998762 12222334577888899999 89999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+|+|+||++ |+|.++|.+-+.|++...+.++.||+.||+|||++|||||||||||||++++|++||+|||.|+......
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 999999999 8999999999999999999999999999999999999999999999999999999999999998764332
Q ss_pred CC---CCCc---ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc
Q 000410 179 DD---PSDF---SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG 252 (1553)
Q Consensus 179 ~~---~~~~---~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~ 252 (1553)
.. +... .....+..||..|.+||++. ....++.+|||+||||||+|+.|.|||...+...+.+.
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~----------~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk 298 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLN----------DSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK 298 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhc----------CCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH
Confidence 22 1111 11123467899999999775 45778999999999999999999999987765444433
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.......++...++.+++||.++|..||.+|+|++||.+|
T Consensus 299 I~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 299 IQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 3333333555556899999999999999999999999998
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=379.87 Aligned_cols=248 Identities=20% Similarity=0.262 Sum_probs=214.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++++.||+|+||+||.++.++ +.+|+|++.|.... .....+....|+.+|..++||.||+++..|++...+|+|
T Consensus 26 dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv--~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 26 DFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIV--EKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred heeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhh--hhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 89999999999999999999875 56999999887322 223456788999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||+. |.|+-.|.+.+.+++..++.++..|+.||.|||++||+||||||||||++.+|+++|+|||+++......+
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~--- 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD--- 180 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC---
Confidence 99999 59999999999999999999999999999999999999999999999999999999999999985532222
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCC-CCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPS-QHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~-~~~~ 261 (1553)
...+.+||+.|||||++. +..|+.++|.||||+++|||++|.|||...+..++.+...... ...+
T Consensus 181 ----~t~tfcGT~eYmAPEil~----------~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p 246 (357)
T KOG0598|consen 181 ----ATRTFCGTPEYMAPEILL----------GKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP 246 (357)
T ss_pred ----ccccccCCccccChHHHh----------cCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC
Confidence 224578999999999876 4478899999999999999999999999888766655544433 5566
Q ss_pred CCCCHHHHHHHHHhcccCcCCCC----CHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRF----SAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rp----sa~elL~~ 292 (1553)
...+.+.+++|.++|..||++|. .++++-+|
T Consensus 247 ~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 247 GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 66788999999999999999996 56666665
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-41 Score=377.94 Aligned_cols=247 Identities=19% Similarity=0.263 Sum_probs=212.2
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
++|.+.+.||+|+|+.||+|+|+. ..||||.+.+..- ..+..+.+..|+.+|+.++|||||++++++++++.+||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l---~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL---NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc---CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 389999999999999999999975 5699999977521 34566778899999999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC------CcEEEeecCcccccc
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW------NWLYLSDFASFKPTY 175 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~------~~vkL~DFG~a~~~~ 175 (1553)
|||||. |+|.++|..++.+++..++.++.||+.||++||+++||||||||+|||++.. -.+||+|||+|+...
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 999999 7999999999999999999999999999999999999999999999999875 358999999998763
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH---hc
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR---RG 252 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~---~~ 252 (1553)
...+..+.+|++.|||||++. ...|+.|+|+||+|+|+|+|++|++||+.....++. +.
T Consensus 167 --------~~~~a~tlcGSplYMAPEV~~----------~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k 228 (429)
T KOG0595|consen 167 --------PGSMAETLCGSPLYMAPEVIM----------SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK 228 (429)
T ss_pred --------chhHHHHhhCCccccCHHHHH----------hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc
Confidence 233457889999999999774 457899999999999999999999999866554433 22
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+.++...+..+.+|+...|..+|..|.+..+.+.|
T Consensus 229 ~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 229 GNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred cccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence 2223344555556678899999999999999999988776
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-42 Score=371.47 Aligned_cols=255 Identities=23% Similarity=0.369 Sum_probs=207.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|+.+.++|+|+||.||+|++++ +.||||.|... .+....++.-.+|+++|++++|||+|.++++|...+.++||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es---edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES---EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccC---CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 57788899999999999999975 56999999654 34456667778899999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+|||+.++.+-+...+ .++...++.|++|++.|+.|||+++++|||||||||||+.+|.+||||||+|+....|.+.-
T Consensus 80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y- 158 (396)
T KOG0593|consen 80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY- 158 (396)
T ss_pred eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh-
Confidence 9999988877776644 48999999999999999999999999999999999999999999999999999775444432
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHh--cC---
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRR--GQ--- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~--~~--- 253 (1553)
+....|.||+|||.+.+ ..+|++.+||||+||++.||++|.|.|.+. ++..++. |.
T Consensus 159 ------TDYVATRWYRaPELLvG---------DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~p 223 (396)
T KOG0593|consen 159 ------TDYVATRWYRAPELLVG---------DTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIP 223 (396)
T ss_pred ------hhhhhhhhccChhhhcc---------cCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCH
Confidence 23345889999998853 458999999999999999999999999753 2322221 11
Q ss_pred -----CC----------CCC--------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCchhh
Q 000410 254 -----YD----------PSQ--------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLH 307 (1553)
Q Consensus 254 -----~~----------~~~--------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~fl~ 307 (1553)
+. |.+ .++++ +.-+.+|+++||+.||++|++.+|+|.| +||..|..
T Consensus 224 rhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~-s~~~ld~~k~cL~~dP~~R~sc~qll~H-------~yFd~~~e 292 (396)
T KOG0593|consen 224 RHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKI-SNVLLDLLKKCLKMDPDDRLSCEQLLHH-------PYFDGFIE 292 (396)
T ss_pred HHHHHhccCCceeeeecCCCCCccchhhhcccc-hHHHHHHHHHHhcCCccccccHHHHhcC-------hHHHHHHH
Confidence 00 110 11112 3467899999999999999999999998 67755443
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=362.18 Aligned_cols=250 Identities=19% Similarity=0.240 Sum_probs=206.3
Q ss_pred ccceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEE-EE-EeCCE
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQF-WQ-ETDKA 99 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~-~~-~~~~~ 99 (1553)
.-+|++++.||+|.||.||++.+. +..+|.|.+.-. .-.....+.+..|+.+|++|+||||++|++ .+ ++...
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~---~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ev 94 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG---MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEV 94 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh---hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchh
Confidence 337999999999999999999884 456999987532 122445667889999999999999999988 33 44455
Q ss_pred EEEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCCCCCcEEEecCCcEEEeecCc
Q 000410 100 AYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHE--KG--ICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~--~g--IvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
++||||||. |+|.+.|+ .+..+++..++.++.|++.||.+||+ .. |+||||||.||+++.+|.|||+|||+
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL 174 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGL 174 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchh
Confidence 999999999 89999884 35569999999999999999999999 55 99999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR 250 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~ 250 (1553)
++.... ...+..+..|||+||+||++. ..+|++++||||+||++|||+.-++||.+.++..+.
T Consensus 175 ~r~l~s-------~~tfA~S~VGTPyYMSPE~i~----------~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~ 237 (375)
T KOG0591|consen 175 GRFLSS-------KTTFAHSLVGTPYYMSPERIH----------ESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLC 237 (375)
T ss_pred HhHhcc-------hhHHHHhhcCCCcccCHHHHh----------cCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHH
Confidence 986621 122345678999999999876 457899999999999999999999999988876654
Q ss_pred h----cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 251 R----GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 251 ~----~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
+ +.+.+ .+..+.+.+++.||..|+..||+.||+.-.++.+...
T Consensus 238 ~KI~qgd~~~--~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 238 KKIEQGDYPP--LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHHHcCCCCC--CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 4 43332 2335678899999999999999999997777776543
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-40 Score=388.02 Aligned_cols=244 Identities=23% Similarity=0.289 Sum_probs=214.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
-|++++.||.|+-|.|-+|+|. ++.+|||++.+.... .+.....+++|+-+|+.+.||||+++|+++++..++|+|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~--s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL--SSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeecccccc--ccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 5999999999999999999995 467999999887322 223345688888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
.||++ |.|++++-.++.+++.++..+++||+.|+.|||..+|||||+||||+|++..+.+||+|||+|..-
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe-------- 162 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE-------- 162 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc--------
Confidence 99999 799999999999999999999999999999999999999999999999999999999999998643
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.......|.||+|+|.|||++.+..|+ +.++||||.|+|||.|++|+.||+.+++.. .++|.|.
T Consensus 163 ~~gklLeTSCGSPHYA~PEIV~G~pYd---------G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~--- 230 (786)
T KOG0588|consen 163 VPGKLLETSCGSPHYAAPEIVSGRPYD---------GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE--- 230 (786)
T ss_pred cCCccccccCCCcccCCchhhcCCCCC---------CCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc---
Confidence 123356899999999999998866554 679999999999999999999999877544 4566665
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++...+.++++||.+||..||++|.|.+|+++|
T Consensus 231 -MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 231 -MPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -CCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 445556899999999999999999999999999
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-41 Score=381.97 Aligned_cols=245 Identities=21% Similarity=0.341 Sum_probs=200.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCC-EEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDK-AAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~-~~~ 101 (1553)
+|++.++||.|.||.||+|+..+ +.||||.++++ ....++.. =.+|+..|++++ ||||+++.+++.+.+ .+|
T Consensus 11 RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~K--f~s~ee~~--nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKK--FYSWEECM--NLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhh--hccHHHHH--HHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 78999999999999999998864 67999999776 22333322 246778999998 999999999997776 999
Q ss_pred EEeccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|||||+.+||++++.|+ .+++..++.|++||++||+|+|.+|+.|||+|||||||.....+||+|||+|+.+....
T Consensus 87 fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp-- 164 (538)
T KOG0661|consen 87 FVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP-- 164 (538)
T ss_pred eeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCC--
Confidence 999999999999998875 49999999999999999999999999999999999999988999999999999874322
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcC---
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQ--- 253 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~--- 253 (1553)
.+ +...-|.||+|||++.. ...|+.++||||+|||++|+++-+|.|.+. ++.++....
T Consensus 165 --PY----TeYVSTRWYRAPEvLLr---------s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP 229 (538)
T KOG0661|consen 165 --PY----TEYVSTRWYRAPEVLLR---------SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTP 229 (538)
T ss_pred --Cc----chhhhcccccchHHhhh---------ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCC
Confidence 12 23345788999999853 457999999999999999999999999753 333332211
Q ss_pred ----------------CCC-------CC-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ----------------YDP-------SQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ----------------~~~-------~~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.. .. .++. .+.++.+||.+||.+||++||||+|+|+|
T Consensus 230 ~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 230 DKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ccccchhHHHHHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 110 00 1122 45789999999999999999999999998
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=377.75 Aligned_cols=247 Identities=19% Similarity=0.273 Sum_probs=220.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|.||.||+|+.+. +.||+|.+.|.+. .+...+.+.+|+++++.++||||+.++++|++..++++|
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr---~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR---NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCC---chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 67888999999999999999876 5699999988743 244556788999999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
.|||.|+|..++...+.++++.++.|+.|++.||.|||+++|+|||+||.|||+...|.+|+||||+|+... .
T Consensus 80 te~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~-------~ 152 (808)
T KOG0597|consen 80 TEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS-------T 152 (808)
T ss_pred ehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcc-------c
Confidence 999999999999999999999999999999999999999999999999999999999999999999998652 2
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCC
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKI 263 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 263 (1553)
.........|||.|||||.+. +++|+..+|+|||||++|||++|+|||-...+..+.+.+...+..++..
T Consensus 153 ~t~vltsikGtPlYmAPElv~----------e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~ 222 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVE----------EQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPST 222 (808)
T ss_pred CceeeeeccCcccccCHHHHc----------CCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCccc
Confidence 344556778999999999654 6688999999999999999999999998888877766666555556666
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 264 PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 264 ~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+..+++|+..+|.+||.+|.+..+++.|
T Consensus 223 ~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 223 ASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred ccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 67899999999999999999999999998
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-40 Score=375.09 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=202.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
.|+.+++||+|.||.||+|++.. ..||+|.+..... .+.+.....+|+.+|++|+||||+++.+...+. ..+|
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~---~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE---KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC---CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 57778899999999999999864 5699999876532 233445567888999999999999999988766 6899
Q ss_pred EEeccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
||+|||+.+|..++...+ .+++.+++.|++||+.||+|||++||+|||||..||||+.+|.+||+|||+|+.+......
T Consensus 195 lVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 195 LVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred EEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence 999999999999998753 5999999999999999999999999999999999999999999999999999866332221
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhc-CCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRG-QYD 255 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~-~~~ 255 (1553)
.+.....|.+|+|||++.+. ..|+.++|+||+||||.||++|+|.|.+.+ +..+.+- ...
T Consensus 275 ------~~T~rVvTLWYRpPELLLG~---------t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP 339 (560)
T KOG0600|consen 275 ------PYTSRVVTLWYRPPELLLGA---------TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSP 339 (560)
T ss_pred ------ccccceEEeeccChHHhcCC---------cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCC
Confidence 13455679999999998753 479999999999999999999999997653 3322211 000
Q ss_pred CCCCCC------------------------CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 PSQHLE------------------------KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~------------------------~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....|+ ...+....+|+..||..||.+|.||.++|++
T Consensus 340 ~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 340 TEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 000111 1235678899999999999999999999987
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=343.11 Aligned_cols=248 Identities=23% Similarity=0.271 Sum_probs=203.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|...++||+|.||.||+|++.. +.||||.+...... +.......+|++.|+.++||||+.++++|...+.+-||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k---dGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK---DGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc---cCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEE
Confidence 68889999999999999999864 66999999765221 22344566888999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++.+|+..|+.+. .++..++++++.|+++||+|||++.|+||||||.|+||+++|.+||+|||+++....+....
T Consensus 80 fEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~- 158 (318)
T KOG0659|consen 80 FEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ- 158 (318)
T ss_pred EEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccc-
Confidence 9999999999998754 59999999999999999999999999999999999999999999999999999875543321
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHh-------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRR------- 251 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~------- 251 (1553)
....-|.+|+|||.+.+. ..|+..+||||.|||++||+.|.|.|.+.. +..+.+
T Consensus 159 ------~~~V~TRWYRAPELLfGs---------r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~ 223 (318)
T KOG0659|consen 159 ------THQVVTRWYRAPELLFGS---------RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTP 223 (318)
T ss_pred ------ccceeeeeccChHHhccc---------hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCc
Confidence 122458899999998753 478999999999999999999999996542 222111
Q ss_pred --------------cCCCCCC---CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 --------------GQYDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 --------------~~~~~~~---~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
-.+.+.+ .+....++++.+|+.+||..||.+|++|.|+|+|
T Consensus 224 ~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 224 DQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111111 1122224577999999999999999999999998
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=382.38 Aligned_cols=251 Identities=23% Similarity=0.256 Sum_probs=211.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCC-cCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDY-IDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~-~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~ 101 (1553)
.|.+++.||+|.||+|++|.+. +..||+|++.+.... .. ....+.+.+|+.+++.+. ||||+++++++.+...+|
T Consensus 18 ~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~-~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ 96 (370)
T KOG0583|consen 18 KYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS-QKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY 96 (370)
T ss_pred ceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc-cccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence 7999999999999999999885 467999977664211 12 244556778889999998 999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC-CcEEEeecCccccccCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~-~~vkL~DFG~a~~~~~~~~ 179 (1553)
+|||||. |+|++++..++++.+.+++.+++||+.|++|||++||+||||||||||++.+ +.+||+|||++....
T Consensus 97 ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~---- 172 (370)
T KOG0583|consen 97 IVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP---- 172 (370)
T ss_pred EEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC----
Confidence 9999999 5999999998899999999999999999999999999999999999999999 999999999987542
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQH 259 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~ 259 (1553)
.......+.+|++.|+|||+|.+.. ..-+.++||||+|++||.|++|..||+..+..............
T Consensus 173 ---~~~~~l~t~cGsp~Y~aPEvl~~~~--------~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~ 241 (370)
T KOG0583|consen 173 ---GEDGLLKTFCGSPAYAAPEVLSGKG--------TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFK 241 (370)
T ss_pred ---CCCCcccCCCCCcccCCHHHhCCCC--------CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCcc
Confidence 1123457889999999999986433 02258999999999999999999999877654443333333334
Q ss_pred CCCCC-CHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIP-DSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~-~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++... +++++.||.+||..||.+|+++.++++|
T Consensus 242 ~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 242 IPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 55555 8899999999999999999999999987
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-40 Score=361.60 Aligned_cols=253 Identities=22% Similarity=0.218 Sum_probs=214.8
Q ss_pred CccceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
...+|++.+.||+|.||+|-+|... ++.||||.+.|.. ...+.-.-.+++|++||..|+||||+.+|++|+..+.+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk--IkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI 128 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK--IKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI 128 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh--cccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence 3447899999999999999999874 4779999997753 23344556789999999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
.|||||.. |.||||++.++.|++.+++.+++||..|+.|||.++++|||||.+|||++.++++||+|||++..+.
T Consensus 129 vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~---- 204 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA---- 204 (668)
T ss_pred EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc----
Confidence 99999999 7999999999999999999999999999999999999999999999999999999999999986541
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQH 259 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~ 259 (1553)
...+..+.+|+|-|.+||++.+..+ -++.+|.||||++||.|+.|..||++.+...+.+........
T Consensus 205 ----~~kfLqTFCGSPLYASPEIvNG~PY---------~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr 271 (668)
T KOG0611|consen 205 ----DKKFLQTFCGSPLYASPEIVNGTPY---------KGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR 271 (668)
T ss_pred ----cccHHHHhcCCcccCCccccCCCCC---------CCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc
Confidence 2345678899999999998764432 368999999999999999999999988765544333322211
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
-+..+ ....-||+.||..||++|.|++++..|||-
T Consensus 272 EP~~P-SdA~gLIRwmLmVNP~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 272 EPETP-SDASGLIRWMLMVNPERRATIEDIASHWWV 306 (668)
T ss_pred CCCCC-chHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence 22233 368999999999999999999999999873
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=368.95 Aligned_cols=254 Identities=20% Similarity=0.270 Sum_probs=205.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++++.||+|+||.||+|+-++ ..+|+|++.|.. .-.....+.++.|+.+|...++|+||++|-.|++..++|||
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~--M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE--MLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHHH--HHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 89999999999999999998764 669999998762 22233445688899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC-----
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP----- 177 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~----- 177 (1553)
|||++ |++..+|...+.|++..++.++.+++.|++.||++|++||||||+|+|||..|++||+|||+++.....
T Consensus 220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~ 299 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIES 299 (550)
T ss_pred EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhh
Confidence 99999 599999999999999999999999999999999999999999999999999999999999998654321
Q ss_pred ------------CCCCCCcce-----------------------eeecCCCCccccCcchhcccCCccccccCCCCCCcc
Q 000410 178 ------------YDDPSDFSF-----------------------FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222 (1553)
Q Consensus 178 ------------~~~~~~~~~-----------------------~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~ 222 (1553)
...+.++.. +.-...|||.|+|||+|.+ ..|+..+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~----------kgY~~~c 369 (550)
T KOG0605|consen 300 YRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG----------KGYGKEC 369 (550)
T ss_pred hcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc----------CCCCccc
Confidence 111122221 1113468999999998873 4578899
Q ss_pred cHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCC----CCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHHHh
Q 000410 223 DIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDP----SQHLEKIPDSGIRKMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 223 DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
|.||||||+|||+.|.|||..++.....+..... ...-....++++++||.+||. ||++|. +++||-+|
T Consensus 370 DwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 370 DWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 9999999999999999999876654433222211 111111234789999999999 999999 48888888
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=344.55 Aligned_cols=245 Identities=19% Similarity=0.228 Sum_probs=210.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+..+.||.|+||+|.+++++. ..+|+|++.+.. .... ...+....|..+|+.+.||+++++++.+.+.+.+|||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-vVkl-KQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-VVKL-KQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-HHHH-HHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 78899999999999999999864 569999998762 1122 2344577889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |.|+.++++.+++++..++.++.||+.||+|||+++|++|||||||||+|.+|.+||+|||+|+...
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~------- 195 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS------- 195 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec-------
Confidence 99999 5999999999999999999999999999999999999999999999999999999999999999762
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
...-|-||||.|+|||++. ..+|+.++|.||||+++|||+.|.|||-..+..++...+....-.+|.
T Consensus 196 ---~rT~TlCGTPeYLAPEii~----------sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~ 262 (355)
T KOG0616|consen 196 ---GRTWTLCGTPEYLAPEIIQ----------SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS 262 (355)
T ss_pred ---CcEEEecCCccccChHHhh----------cCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc
Confidence 1134678999999999764 557899999999999999999999999776655554444444455677
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
..+..+++||.++|+.|-.+|. ..+++..|
T Consensus 263 ~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H 297 (355)
T KOG0616|consen 263 YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH 297 (355)
T ss_pred ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC
Confidence 7788999999999999999994 44556555
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=350.63 Aligned_cols=253 Identities=21% Similarity=0.201 Sum_probs=207.6
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
-+|++.+.||.|.-+.||+|++. +..||||++.... .......+++|...|+.++||||++++..|..+..+|+
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEk----c~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEK----CNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhh----hhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 38999999999999999999985 5779999997652 23336678899999999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 103 LRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
||+||. |++.+.++.. ..++|..+..|++++++||.|||.+|.||||||+.||||+++|.|||+|||.+.......
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G- 180 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG- 180 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC-
Confidence 999999 7999999753 339999999999999999999999999999999999999999999999999765554322
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYDPSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~~~~ 258 (1553)
......|.+..|++||||||++. .+...|+.|+||||||++..||.+|+.||..-. +..+........+
T Consensus 181 --~R~~~rf~tfvgtp~wmAPEvl~--------q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp 250 (516)
T KOG0582|consen 181 --DRQVTRFNTFVGTPCWMAPEVLM--------QQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPP 250 (516)
T ss_pred --ceeeEeeccccCcccccChHHhh--------hcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCC
Confidence 22223337889999999999975 334579999999999999999999999996333 2222221111111
Q ss_pred ---------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 ---------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ---------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+..+..++++|..||++||.+||||+++|+|
T Consensus 251 ~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 251 TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1122335689999999999999999999999998
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=352.11 Aligned_cols=250 Identities=20% Similarity=0.261 Sum_probs=203.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-----CC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-----DK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-----~~ 98 (1553)
.|...+.||.|+||.|+.|.+.. ..||||.+... .......++..+|..+|+.++|+||+.+.+++.. -+
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~---F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP---FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhh---hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 56668999999999999998864 67999988533 3445566677788899999999999999998855 35
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.+|+|+|+|+.+|...|+.++.|++..+..+++||++||+|+|+.||+||||||.|+|++.+..+||+|||+|+.....
T Consensus 100 DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~- 178 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF- 178 (359)
T ss_pred eeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-
Confidence 7999999999999999999988999999999999999999999999999999999999999999999999999876332
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH-----------
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----------- 247 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----------- 247 (1553)
. ...+.+....|.+|+|||++. ....|+.+.||||+|||++||++|+|.|.+.+..
T Consensus 179 ~----~~~~mTeYVaTRWYRAPElll---------~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 179 F----EDGFMTEYVATRWYRAPELLL---------NSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG 245 (359)
T ss_pred C----cccchhcceeeeeecCHHHHh---------ccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC
Confidence 1 122233445688999999874 3458999999999999999999999999654321
Q ss_pred ----------------HHHhcCCC-CCC---CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 248 ----------------AYRRGQYD-PSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 248 ----------------~~~~~~~~-~~~---~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.|.+.... +.. .+....++...+|+.+||..||.+|+|++|+|+|
T Consensus 246 tP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 246 TPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111111 111 1222446789999999999999999999999998
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=336.08 Aligned_cols=254 Identities=23% Similarity=0.234 Sum_probs=214.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccC---CCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRG---DYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~---~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
.|.-.+.||+|..+.|.+|.++. +.+|+|++.... ......+..+.-..|+.||+++ .||||++++++|+++..
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 46667899999999999998864 669999887652 2233555666677888999998 59999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.++|+|.|+ |.|+|++...-.+++.+.+.|++||++|++|||.++|+||||||+|||++++.+++|+|||+++.....
T Consensus 98 ~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G- 176 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG- 176 (411)
T ss_pred hhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc-
Confidence 999999999 899999999988999999999999999999999999999999999999999999999999999876221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC-chHH---HHHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE-LSHL---LAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~-~~~~---~~~~~~~~ 254 (1553)
......+|||.|+|||.+...-++ ....|+..+|+|++|+|+|.|+.|.|||- ..++ ..+..|.|
T Consensus 177 -------ekLrelCGTPgYLAPEtikC~m~e----~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky 245 (411)
T KOG0599|consen 177 -------EKLRELCGTPGYLAPETIKCSMYE----NHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY 245 (411)
T ss_pred -------hhHHHhcCCCcccChhheeeeccc----CCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc
Confidence 123566899999999998755432 34568999999999999999999988874 3443 34567888
Q ss_pred CCC-CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPS-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~-~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... +.|..+. ...++||.+||+.||.+|.|++|+|.|
T Consensus 246 qF~speWadis-~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 246 QFRSPEWADIS-ATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ccCCcchhhcc-ccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 744 4555554 579999999999999999999999998
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=357.22 Aligned_cols=261 Identities=17% Similarity=0.157 Sum_probs=205.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCC----CcCHHH-----HHHHHHHHHHHHhcCCCCCeeEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGD----YIDLRE-----YERRLFHIRETFRSIDHPHVWAFQFWQ 94 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~----~~~~~~-----~~~~l~~e~~~l~~l~hpnIv~~~~~~ 94 (1553)
+|++.+.||+|.||+|.+|++.. ..||||++.|..- ....+. -.+++++|+.+|+++.|||||+++++.
T Consensus 98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL 177 (576)
T KOG0585|consen 98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL 177 (576)
T ss_pred heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence 79999999999999999999864 6799999987611 111111 124788999999999999999999999
Q ss_pred EeC--CEEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 95 ETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 95 ~~~--~~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
.+. +.+|||+|||. |.+...-...+-+++.+++.|+++++.||+|||.+||+||||||+|+||+++|+|||+|||.+
T Consensus 178 DDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs 257 (576)
T KOG0585|consen 178 DDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVS 257 (576)
T ss_pred cCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecccee
Confidence 764 57999999999 555433333334999999999999999999999999999999999999999999999999988
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR 251 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~ 251 (1553)
...... ...+....+....|||.|+|||.+.+... ....+.+.||||+|++||.|+.|+.||-.+.......
T Consensus 258 ~~~~~~--~~~~~d~~L~~tvGTPAF~APE~c~~~~~------~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~ 329 (576)
T KOG0585|consen 258 NEFPQG--SDEGSDDQLSRTVGTPAFFAPELCSGGNS------FSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD 329 (576)
T ss_pred eecccC--CccccHHHHhhcCCCccccchHhhcCCCC------ccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence 755322 22223333445679999999998864221 2345778999999999999999988887776666555
Q ss_pred cCCCCCCCCCCC--CCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 252 GQYDPSQHLEKI--PDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 252 ~~~~~~~~~~~~--~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+....-.++.. ..+.+++||.+||++||++|.+..++..|.+
T Consensus 330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 444433333333 3678999999999999999999999998854
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=355.99 Aligned_cols=251 Identities=20% Similarity=0.205 Sum_probs=202.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC--EE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK--AA 100 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~--~~ 100 (1553)
.+|...+.||+|+||.||++.+.+ ...|||....... .. .+.+.+|..+|++++|||||++++...... .+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~----~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~ 91 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS----PT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEY 91 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc----hh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeee
Confidence 378999999999999999999975 6799999876521 11 566888999999999999999999754443 69
Q ss_pred EEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCC
Q 000410 101 YLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~ 177 (1553)
++.|||++ |+|.+++...+ .|++..++.+++||++||.|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 99999999 69999998866 7999999999999999999999999999999999999999 699999999988765320
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch--HHH-HHHhcCC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS--HLL-AYRRGQY 254 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~--~~~-~~~~~~~ 254 (1553)
...........||+.|||||.+.. +....+++|||||||++.||+||.+||..- ... .+..+..
T Consensus 172 ----~~~~~~~~~~~Gtp~~maPEvi~~---------g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~ 238 (313)
T KOG0198|consen 172 ----GTKSDSELSVQGTPNYMAPEVIRN---------GEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE 238 (313)
T ss_pred ----cccccccccccCCccccCchhhcC---------CCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc
Confidence 011111234568999999998752 112336999999999999999999999751 111 1222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
...+.++...++++++||.+|+..||++||||+++|+|.
T Consensus 239 ~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 239 DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 223367777788999999999999999999999999983
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=339.08 Aligned_cols=248 Identities=19% Similarity=0.245 Sum_probs=198.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~ 101 (1553)
+|+.+..|++|.||.||+|+++. ..||+|.++...+... +--.-.+|+.+|.+++|||||.+-++... -+.+|
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G---FPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG---FPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC---CcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 78889999999999999999964 6799999876532211 11223467789999999999999988754 35699
Q ss_pred EEeccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
||||||+.+|...+.+-+ ++...+++.++.|+++||+|||.+.|+||||||+|+|++..|.+||+|||+|+.+..|...
T Consensus 154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~ 233 (419)
T KOG0663|consen 154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP 233 (419)
T ss_pred eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCccc
Confidence 999999999999987654 6999999999999999999999999999999999999999999999999999988666432
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhc----
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRG---- 252 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~---- 252 (1553)
+.....|.+|+|||++.+. ..|+.+.|+||+|||++||++++|.|.+. ++.++.+-
T Consensus 234 -------~T~lVVTLWYRaPELLLG~---------~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtP 297 (419)
T KOG0663|consen 234 -------YTPLVVTLWYRAPELLLGA---------KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTP 297 (419)
T ss_pred -------CcceEEEeeecCHHHhcCC---------cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCC
Confidence 2333468999999998643 47899999999999999999999999753 22222110
Q ss_pred ---CCCC--------------------CCCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ---QYDP--------------------SQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ---~~~~--------------------~~~~~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+++. ...+... .++...+|+..+|..||.+|.||+|.|+|
T Consensus 298 te~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 298 SEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1110 0001111 34678899999999999999999999998
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=351.32 Aligned_cols=245 Identities=24% Similarity=0.264 Sum_probs=207.4
Q ss_pred ceEEEEEeeccCcEEEEEEEE--CCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~--~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
=|.+.+.||+|.|+.|.+|+| .+..||||++.|..- .......+..|++.|+.++|||||++|+++.+...+|||
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl---D~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL---DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc---chhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 477889999999999999998 467899999987621 122344577888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe-cCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT-SWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~-~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|+-+ |+|+|||.+. ..+++..+++++.||+.|+.|||+..|||||||||||.+- .-|-|||+|||++..+. |
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-P--- 171 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-P--- 171 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-C---
Confidence 99999 6999999654 4599999999999999999999999999999999998765 56899999999886541 1
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~~~ 256 (1553)
.....+.+|+..|-|||++.+..++ .+++||||||+|||.|++|++||... .+..+..+.|.
T Consensus 172 ----G~kL~TsCGSLAYSAPEILLGDsYD---------APAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt- 237 (864)
T KOG4717|consen 172 ----GKKLTTSCGSLAYSAPEILLGDSYD---------APAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT- 237 (864)
T ss_pred ----cchhhcccchhhccCchhhhcCccC---------CcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc-
Confidence 2245788999999999999876655 57899999999999999999999644 34455555554
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...+.++++||..||..||.+|.+.++|..+-|
T Consensus 238 ---vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 238 ---VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred ---CchhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 55666789999999999999999999999998743
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=359.57 Aligned_cols=251 Identities=19% Similarity=0.190 Sum_probs=208.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECCce-EEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-EEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGL-VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK-AAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~-vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~-~~~lV 103 (1553)
+..+.+.||+|+||+||++.+.+.. ||||++...... ... .+.+.+|+.+|.+++|||||+|++++.... ..+||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~--~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFD--DES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcC--hHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence 5566778999999999999999987 999999765222 122 778999999999999999999999998887 79999
Q ss_pred ecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCcEEEecCC-cEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKG-ICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~g-IvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~ 178 (1553)
|||++ |+|++++.. +..++...+..|+.||++|++|||+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 99999 799999977 567999999999999999999999999 99999999999999998 99999999998653221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH--HhcCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY--RRGQYDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~--~~~~~~~ 256 (1553)
.......||+.|||||++.+. ...|+.|+||||||+++|||+||+.||........ .......
T Consensus 199 -------~~~~~~~GT~~wMAPEv~~~~--------~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~ 263 (362)
T KOG0192|consen 199 -------TSMTSVAGTYRWMAPEVLRGE--------KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL 263 (362)
T ss_pred -------ccccCCCCCccccChhhhcCC--------CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC
Confidence 111225689999999988532 45799999999999999999999999975443222 2222223
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+.++...++.+..|+.+||..||++||++.+++..++
T Consensus 264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 34455557789999999999999999999999998754
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=342.26 Aligned_cols=241 Identities=24% Similarity=0.364 Sum_probs=192.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--C---
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--K--- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~--- 98 (1553)
.|.-.+.+|+|+||.||+|...+ +.||||......... .+|.++|+.++||||+++.-+|... +
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---------NRELQIMRKLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---------cHHHHHHHhcCCcCeeeEEEEEEecCCCchh
Confidence 58889999999999999998854 679999886543221 2455788999999999998777432 2
Q ss_pred EEEEEeccccCCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC-CcEEEeecCcccc
Q 000410 99 AAYLLRQYFFNSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKP 173 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~-~~vkL~DFG~a~~ 173 (1553)
+..+||||++.+|+++++. +..++..+++-+++||++||.|||+.|||||||||.|+|||.+ |.+||||||+|+.
T Consensus 96 ~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 96 YLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 3458999999999999974 5669999999999999999999999999999999999999976 8999999999997
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHH
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAY 249 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~ 249 (1553)
....+.+ .++. .|..|+|||.+.+. ..|+.+.||||+|||++||+.|+|.|.++. +..+
T Consensus 176 L~~~epn---iSYi-----cSRyYRaPELifga---------~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eI 238 (364)
T KOG0658|consen 176 LVKGEPN---ISYI-----CSRYYRAPELIFGA---------TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEI 238 (364)
T ss_pred eccCCCc---eeEE-----EeccccCHHHHcCc---------cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHH
Confidence 7443322 3333 36779999998753 479999999999999999999999997543 2211
Q ss_pred Hh--------------cC-----CC---CC---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 RR--------------GQ-----YD---PS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ~~--------------~~-----~~---~~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+ .. +. .. ..+....++++.+|+.++|..+|.+|.++.|++.|
T Consensus 239 ik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 239 IKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11 11 01 00 01333456789999999999999999999999998
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=326.63 Aligned_cols=248 Identities=22% Similarity=0.231 Sum_probs=210.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+++.||+|.||.||+|+.+. -.||+||+.|.. ........++.+|+++...|+||||+++|++|.++...||+
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq--i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ--ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHHH--HHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 78999999999999999999876 359999998862 33445677899999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||.. |+|+..+. ....+++.....+++|++.||.|||.++|+||||||+|+|++..|.+||+|||-+....
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p----- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----
Confidence 99999 89999998 45569999999999999999999999999999999999999999999999999775431
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHL 260 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~ 260 (1553)
.....+.+||..|.+||+.. +..++..+|+|++|++.||++.|.|||......+..+........+
T Consensus 176 ----~~kR~tlcgt~dyl~pEmv~----------~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~ 241 (281)
T KOG0580|consen 176 ----SNKRKTLCGTLDYLPPEMVE----------GRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKF 241 (281)
T ss_pred ----CCCceeeecccccCCHhhcC----------CCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccC
Confidence 11235678999999999654 5567889999999999999999999997554332222222222234
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+...+.+++++|.+||..+|.+|.+..|+++|++
T Consensus 242 p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 242 PSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred CcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 4566789999999999999999999999999965
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=360.37 Aligned_cols=247 Identities=18% Similarity=0.217 Sum_probs=210.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|++.++||+|.||+|+++..++ +.+|||+++|...- ..+ ..+.+..|.+++... +||.++.++..|++.+++|+
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il-~~d-~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDIL-QRD-EVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeecccee-ccc-cHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 89999999999999999999865 67999999886322 212 223455666677666 49999999999999999999
Q ss_pred EeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||+.| + .-.+...+.+++..++.|+..++.||+|||++||||||||.+|||+|.+|++||+|||++|......+
T Consensus 447 vmey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~-- 523 (694)
T KOG0694|consen 447 VMEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD-- 523 (694)
T ss_pred EEEecCCCc-EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCC--
Confidence 9999995 6 33444456699999999999999999999999999999999999999999999999999996532222
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
...|.+|||.|||||++. +..|+.++|.|||||+||||+.|.+||.+++...+-..+.......+
T Consensus 524 -----~TsTfCGTpey~aPEil~----------e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP 588 (694)
T KOG0694|consen 524 -----RTSTFCGTPEFLAPEVLT----------EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYP 588 (694)
T ss_pred -----ccccccCChhhcChhhhc----------cCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 346789999999999764 56899999999999999999999999999888888777777777788
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
...+.+..++++++|.+||++|..+ +++.+|
T Consensus 589 ~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 589 RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 8888999999999999999999954 667666
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=325.46 Aligned_cols=339 Identities=16% Similarity=0.200 Sum_probs=242.3
Q ss_pred cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEe
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s 1206 (1553)
|--++-+.+.||.++|.|++|+|+|..+||||.|.|||+||+.+.. +..+.++|...|.|++|+|+|..||+|+
T Consensus 103 pvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT------p~~t~KgH~~WVlcvawsPDgk~iASG~ 176 (480)
T KOG0271|consen 103 PVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET------PLFTCKGHKNWVLCVAWSPDGKKIASGS 176 (480)
T ss_pred ccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC------cceeecCCccEEEEEEECCCcchhhccc
Confidence 4456778899999999999999999999999999999999998754 6678899999999999999999999999
Q ss_pred CCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCC--CCcceEEEEEeCCceEEEEeCCCCccccee
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTD--NCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1207 ~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
.||+|++||..+.+ .+-.....|...|.+++|.|- ......|++++.||.|+|||+..++++..+
T Consensus 177 ~dg~I~lwdpktg~-------------~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l 243 (480)
T KOG0271|consen 177 KDGSIRLWDPKTGQ-------------QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL 243 (480)
T ss_pred cCCeEEEecCCCCC-------------cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe
Confidence 99999999986422 122233467778888889774 112468999999999999999999999988
Q ss_pred ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEee----------cCCCCCcc----
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLF----------VPPPNAAV---- 1350 (1553)
Q Consensus 1285 ~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~----------~p~~~~~~---- 1350 (1553)
.+ |..+|+|++|.-+| ++.+|+.|++|++|+...+.+.+.++. |...|+.+.+. .|.+....
T Consensus 244 sg--HT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkG-HahwvN~lalsTdy~LRtgaf~~t~~~~~~~se 319 (480)
T KOG0271|consen 244 SG--HTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKG-HAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSE 319 (480)
T ss_pred cc--CccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcc-cchheeeeeccchhhhhccccccccccCCChHH
Confidence 76 99999999998665 999999999999999988888877775 55566666541 11111100
Q ss_pred ------------ccCCCCEEEEEEcCCeEEEEEcCCCc-EE--------EEEecccCCCCCccCCCcccccCCCCCCCCC
Q 000410 1351 ------------STTARPLIYVAAGCNEVSLWNAENGS-CH--------QVLRTANYDGDTEMSDLPWAFARPSSRSNPK 1409 (1553)
Q Consensus 1351 ------------~s~~~~~l~s~s~dg~V~vWDl~tg~-~~--------~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 1409 (1553)
....+..+++|+.|.++.+|+-...+ ++ .+-.+.-.+....+ .+.+..+
T Consensus 320 ~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~I----------ASaSFDk 389 (480)
T KOG0271|consen 320 EQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYI----------ASASFDK 389 (480)
T ss_pred HHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEE----------EEeeccc
Confidence 00112346666666666666543211 10 01000000000000 0000001
Q ss_pred ccccccccccccccccCCCCCCccCcEEeccCCCCeEE-EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeec
Q 000410 1410 TDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSS 1488 (1553)
Q Consensus 1410 ~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~ll-Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~ 1488 (1553)
....+.+... .-+....+|...|+.++|+.|.+|+ +|+.|.++++||+++.+..+
T Consensus 390 SVkLW~g~tG---k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~--------------------- 445 (480)
T KOG0271|consen 390 SVKLWDGRTG---KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQ--------------------- 445 (480)
T ss_pred ceeeeeCCCc---chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecc---------------------
Confidence 1111111000 1122335677789999999998655 99999999999998654432
Q ss_pred CCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1489 SGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1489 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.+.+|.|.|.+| .|+++|+.++||+.|.++++|+
T Consensus 446 ------------------------------DLpGh~DEVf~v-DwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 446 ------------------------------DLPGHADEVFAV-DWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ------------------------------cCCCCCceEEEE-EecCCCceeecCCCceEEEeec
Confidence 234599999999 7999999999999999999996
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=354.62 Aligned_cols=245 Identities=19% Similarity=0.213 Sum_probs=203.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. ++.||+|++.+... ......+.+.+|..+++.++||||+++++++.++...|+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEV--IRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHH--hhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 6889999999999999999986 46799999865411 1122345678889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. |+|.+++..++.+++.++..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~----- 154 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR----- 154 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-----
Confidence 99998 699999988888999999999999999999999999999999999999999999999999998754211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
.....|++.|+|||.+. +..++.++|||||||++|+|++|.+||..................++.
T Consensus 155 -----~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 219 (291)
T cd05612 155 -----TWTLCGTPEYLAPEVIQ----------SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR 219 (291)
T ss_pred -----cccccCChhhcCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc
Confidence 11235788999999774 335688999999999999999999999765443332222222223444
Q ss_pred CCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
..++.+++||.+||+.||.+||+ ++++++|
T Consensus 220 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 220 HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 55788999999999999999995 9999988
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-36 Score=358.69 Aligned_cols=245 Identities=19% Similarity=0.212 Sum_probs=203.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++.+.. .......+.+.+|..+++.++||||+++++++.+++..|+|
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE--ILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--HhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 79999999999999999999864 669999997541 11123345678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----- 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----- 171 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-----
Confidence 99998 599999988888999999999999999999999999999999999999999999999999998754211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
. .+..|++.|+|||.+. +..++.++|||||||++|||++|.+||..................++.
T Consensus 172 ~-----~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~ 236 (329)
T PTZ00263 172 T-----FTLCGTPEYLAPEVIQ----------SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN 236 (329)
T ss_pred c-----ceecCChhhcCHHHHc----------CCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC
Confidence 0 1235789999999774 335688999999999999999999998655433322222222223455
Q ss_pred CCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
..+..+++||.+||+.||.+|++ ++++++|
T Consensus 237 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 237 WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 56788999999999999999997 7999988
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-38 Score=326.96 Aligned_cols=245 Identities=23% Similarity=0.312 Sum_probs=205.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|.+.+.||+|.|+.|++|.+.. +.+|+|++....-. .. -.+.+.+|++|.+.|+||||+++++.+..+...|||
T Consensus 12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--AR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--cc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 67888999999999999998853 56888887644211 11 345688999999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC---cEEEeecCccccccCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN---WLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~---~vkL~DFG~a~~~~~~~~ 179 (1553)
+|++.| +|..-|-.+-.+++..+-.+++||++||.|||.+||+|||+||+|+|+-+.. -+||+|||+++....
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~--- 165 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND--- 165 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC---
Confidence 999995 8887776677789999999999999999999999999999999999997643 599999999987741
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYD 255 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~ 255 (1553)
........|||.|||||++. ..+|+..+|||+.|+|||-|+.|.+||...+ ...++++.++
T Consensus 166 -----g~~~~G~~GtP~fmaPEvvr----------kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd 230 (355)
T KOG0033|consen 166 -----GEAWHGFAGTPGYLSPEVLK----------KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD 230 (355)
T ss_pred -----ccccccccCCCcccCHHHhh----------cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC
Confidence 11223456899999999764 5689999999999999999999999997632 3456778888
Q ss_pred CCC-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 PSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... .++.+ +++.++||++||..||.+|.|+.|+|+|
T Consensus 231 ~~~~~w~~i-s~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 231 YPSPEWDTV-TPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCCcccCcC-CHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 554 55555 5789999999999999999999999998
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=339.14 Aligned_cols=248 Identities=22% Similarity=0.283 Sum_probs=199.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCC-eeEEEEEEEeCC----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH-VWAFQFWQETDK---- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpn-Iv~~~~~~~~~~---- 98 (1553)
.|...++||+|.||+||+|+.. +..||+|.+....+. +.......+|+.+|+.++|+| |+.+++++.+.+
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~---EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE---EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc---cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 5677788999999999999985 357999998765221 112233457778999999999 999999998877
Q ss_pred --EEEEEeccccCCHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 99 --AAYLLRQYFFNSLRDRLSTPP----FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 99 --~~~lV~E~~~gsL~d~l~~~~----~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
..|+|+||++.+|.+++...+ .++...++.+++||+.||+|||++||+||||||+||||++.|.+||+|||+|+
T Consensus 89 ~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 89 IGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred cceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence 899999999999999997755 48888999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHH
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLA 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~ 248 (1553)
....|... +....+|.+|+|||++.+. ..|+..+||||+|||++||+++++.|.+.. +..
T Consensus 169 a~~ip~~~-------yt~evvTlWYRaPEvLlGs---------~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~ 232 (323)
T KOG0594|consen 169 AFSIPMRT-------YTPEVVTLWYRAPEVLLGS---------TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR 232 (323)
T ss_pred HhcCCccc-------ccccEEEeeccCHHHhcCC---------CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 76655432 3455678999999998743 358999999999999999999999997543 222
Q ss_pred HHhcCC-CCCCCCC-------------------------CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQY-DPSQHLE-------------------------KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~-~~~~~~~-------------------------~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+..- +....|+ +..++...+++.+||+.+|.+|.||+.+|+|
T Consensus 233 If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 233 IFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred HHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 211100 0000111 0112478999999999999999999999998
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=356.06 Aligned_cols=243 Identities=17% Similarity=0.195 Sum_probs=198.3
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||+||+|++.. +.||+|++.+... ........+.+|..+++.++||||++++++++.++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI--IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCC
Confidence 469999999999999853 6699999975421 112233456678899999999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-------~ 151 (323)
T cd05571 79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-------T 151 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC-------c
Confidence 59999998888899999999999999999999999999999999999999999999999999875321111 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||++. +..++.++||||+||++|||++|.+||...+..............++...++.
T Consensus 152 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 221 (323)
T cd05571 152 MKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPE 221 (323)
T ss_pred ccceecCccccChhhhc----------CCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHH
Confidence 12345789999999764 34678899999999999999999999975544333222222222344556789
Q ss_pred HHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 268 IRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
+++||.+||+.||++|| ++.++++|
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 99999999999999999 89999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=355.20 Aligned_cols=245 Identities=18% Similarity=0.205 Sum_probs=202.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|++.+... ........+.+|..+++.++||||+++++++.++...|+
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI--IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 79999999999999999998643 3699999975421 112334567788899999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||+. |+|.+++..+..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~---- 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR---- 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC----
Confidence 999998 699999988888999999999999999999999999999999999999999999999999998754210
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
..+..|++.|+|||++. +..++.++||||+||++|||++|.+||..................++
T Consensus 185 ------~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p 248 (340)
T PTZ00426 185 ------TYTLCGTPEYIAPEILL----------NVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP 248 (340)
T ss_pred ------cceecCChhhcCHHHHh----------CCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 12345789999999874 33568899999999999999999999976544332222222222344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
...++.++++|.+||+.||++|+ +++++++|
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 249 KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 55678899999999999999996 89999998
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=345.75 Aligned_cols=247 Identities=20% Similarity=0.300 Sum_probs=196.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|++.. ..||+|++...... .....+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE----GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC----CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 79999999999999999998864 67999998654221 1223456788999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++|+|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+..
T Consensus 82 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--- 158 (288)
T cd07871 82 FEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK--- 158 (288)
T ss_pred EeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc---
Confidence 9999999999986543 578999999999999999999999999999999999999999999999999875432211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcC-----
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQ----- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~----- 253 (1553)
......+++.|+|||.+.+ ...++.++||||+||++|+|++|++||........ .+..
T Consensus 159 ----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (288)
T cd07871 159 ----TYSNEVVTLWYRPPDVLLG---------STEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTE 225 (288)
T ss_pred ----cccCceecccccChHHhcC---------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 1123356888999997742 23578899999999999999999999965432211 1000
Q ss_pred ----------------CC---CCC--CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ----------------YD---PSQ--HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ----------------~~---~~~--~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+. ... ......++++++||.+||+.||.+|||++|+++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 226 ETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred HHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 000 0011235688999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=345.29 Aligned_cols=247 Identities=17% Similarity=0.143 Sum_probs=208.8
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
..|+..+.||+|.||.||+|.+.. +.||+|++.... .+...+.+++|+.+|.+++++||.++|+.|..+..+++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~----~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwi 88 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE----AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWI 88 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh----cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHH
Confidence 367888999999999999999865 569999997652 23334557778899999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
+||||. |++.+.++..+.+.+.++..|+++++.||.|||.++.+|||||+.|||+...|.+||+|||.+.....
T Consensus 89 iMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~----- 163 (467)
T KOG0201|consen 89 IMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN----- 163 (467)
T ss_pred HHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec-----
Confidence 999999 69999999988889999999999999999999999999999999999999999999999998865422
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC-CCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ-YDPSQHL 260 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~-~~~~~~~ 260 (1553)
......+..|||.|||||++. ...|+.|+||||||++.+||.+|.||+..-....+.--. ...++.+
T Consensus 164 --~~~rr~tfvGTPfwMAPEVI~----------~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L 231 (467)
T KOG0201|consen 164 --TVKRRKTFVGTPFWMAPEVIK----------QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRL 231 (467)
T ss_pred --hhhccccccccccccchhhhc----------cccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCcc
Confidence 222336778999999999775 446889999999999999999999999644433222211 2234455
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....++.+++||..||++||+.||+|.++|+|
T Consensus 232 ~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 232 DGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 66677889999999999999999999999998
|
|
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=353.30 Aligned_cols=242 Identities=22% Similarity=0.306 Sum_probs=195.2
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-C-----CCeeEEEEEEEe
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-H-----PHVWAFQFWQET 96 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-h-----pnIv~~~~~~~~ 96 (1553)
|+|.+.+.||+|.||+|.+|.+.. +.||||+++.. ..+..+-..|+.+|..++ | -|||+++++|..
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~------k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK------KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC------hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 478899999999999999999865 56999999765 445556667778888875 3 479999999999
Q ss_pred CCEEEEEeccccCCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC--cEEEeecCccc
Q 000410 97 DKAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN--WLYLSDFASFK 172 (1553)
Q Consensus 97 ~~~~~lV~E~~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~--~vkL~DFG~a~ 172 (1553)
.++.|||+|.++.|||++|+.+.+ ++...++.++.||+.||.+||+.||||+||||||||+...+ .||++|||++.
T Consensus 260 r~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 260 RNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred ccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence 999999999999999999988754 88999999999999999999999999999999999998765 69999999987
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA---- 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~---- 248 (1553)
... ..-+ +..-+..|+|||+|. +.+|+.+.||||||||++||++|.|+|.+++...
T Consensus 340 ~~~-----q~vy-----tYiQSRfYRAPEVIL----------GlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~ 399 (586)
T KOG0667|consen 340 FES-----QRVY-----TYIQSRFYRAPEVIL----------GLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLAR 399 (586)
T ss_pred ccC-----Ccce-----eeeeccccccchhhc----------cCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHH
Confidence 541 1111 344567799999876 5689999999999999999999999996543211
Q ss_pred ---------------------H-Hh------------------------------cCCCCC-------CCCCCCCCHHHH
Q 000410 249 ---------------------Y-RR------------------------------GQYDPS-------QHLEKIPDSGIR 269 (1553)
Q Consensus 249 ---------------------~-~~------------------------------~~~~~~-------~~~~~~~~~~l~ 269 (1553)
+ .. ...... ..+....+..+.
T Consensus 400 I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~ 479 (586)
T KOG0667|consen 400 IIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFI 479 (586)
T ss_pred HHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHH
Confidence 0 00 000000 001112245689
Q ss_pred HHHHHhcccCcCCCCCHHHHHHh
Q 000410 270 KMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++|.+||..||.+|+|+.|+|+|
T Consensus 480 dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 480 DFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred HHHHHHhccCchhcCCHHHHhcC
Confidence 99999999999999999999999
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=350.00 Aligned_cols=244 Identities=19% Similarity=0.206 Sum_probs=205.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|..-++||+|+.|.||.|+... ..||||.+.+... ..++.+.+|+.+|+..+|+|||.|++.|.-++.+|+|
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q-----~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ-----PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccC-----CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 68888999999999999998754 5699999987632 2345678888999999999999999998888999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.|.+.... ++|.++..|+++++.||+|||.+||+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 349 MEym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--- 424 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTR-MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--- 424 (550)
T ss_pred EeecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC---
Confidence 99999 59999887654 99999999999999999999999999999999999999999999999999876633222
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC-chHHHHHHhcCC--CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE-LSHLLAYRRGQY--DPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~-~~~~~~~~~~~~--~~~~~ 259 (1553)
...+..|||+|||||+. ....|++++||||||+++.||+-|+|||- ...+.++..... .+...
T Consensus 425 ----KR~TmVGTPYWMAPEVv----------trk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk 490 (550)
T KOG0578|consen 425 ----KRSTMVGTPYWMAPEVV----------TRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLK 490 (550)
T ss_pred ----ccccccCCCCccchhhh----------hhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcC
Confidence 23566799999999965 45689999999999999999999998885 333433332222 23333
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...++.+++|+.+||+.||++|++|.|+|+|
T Consensus 491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 445667899999999999999999999999998
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-35 Score=347.78 Aligned_cols=241 Identities=18% Similarity=0.250 Sum_probs=197.7
Q ss_pred eeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|+||.||+|++.+ ..||+|++.+... ........+.+|..+++.++||||+++++++..++..|+||||++ |
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI--VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCC
Confidence 7999999999999864 5699999865411 112334556778899999999999999999999999999999999 6
Q ss_pred CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeee
Q 000410 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189 (1553)
Q Consensus 110 sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 189 (1553)
+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++....... ...
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-------~~~ 151 (312)
T cd05585 79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD-------KTN 151 (312)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC-------ccc
Confidence 9999998888899999999999999999999999999999999999999999999999999874321111 112
Q ss_pred cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHHHH
Q 000410 190 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 269 (1553)
Q Consensus 190 ~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (1553)
...|++.|+|||.+. +..++.++||||+||++|||++|.+||..................++...++.++
T Consensus 152 ~~~gt~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (312)
T cd05585 152 TFCGTPEYLAPELLL----------GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAK 221 (312)
T ss_pred cccCCcccCCHHHHc----------CCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 345789999999774 3467889999999999999999999997655444433333333334555678999
Q ss_pred HHHHHhcccCcCCCC---CHHHHHHh
Q 000410 270 KMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
++|.+||+.||++|| ++.|+++|
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 999999999999997 57899988
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-35 Score=349.17 Aligned_cols=243 Identities=17% Similarity=0.199 Sum_probs=199.8
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||.||++++.. ..||+|++.+... ........+.+|..+++.++||||+++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI--IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCC
Confidence 469999999999999864 6799999976421 112334566778889999999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-------~~ 151 (328)
T cd05593 79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-------AT 151 (328)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-------cc
Confidence 5999999887789999999999999999999999999999999999999999999999999987532111 11
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||.+. +..++.++|||||||++|+|++|.+||..................++...+++
T Consensus 152 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 221 (328)
T cd05593 152 MKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSAD 221 (328)
T ss_pred cccccCCcCccChhhhc----------CCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHH
Confidence 22345789999999764 34578899999999999999999999976554444333333333455566789
Q ss_pred HHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 268 IRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
+.++|.+||+.||++|+ ++.|+++|
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 99999999999999997 89999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=339.19 Aligned_cols=259 Identities=19% Similarity=0.228 Sum_probs=205.5
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
..|++++.||+||.++||++...+ +.||+|.+... ........-+..|+..|.+|+ |.+|+++++|-..++.+||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~---~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLL---EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHh---hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 379999999999999999999875 55666655332 122334455677888999885 8999999999999999999
Q ss_pred EeccccCCHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~~~-l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||-+.+|..+|+++.. ++.-.++.+.+|+|.|+.++|.+||||.||||.|+|+-. |.+||+|||.|+.+ .+
T Consensus 438 vmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI-----~~ 511 (677)
T KOG0596|consen 438 VMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAI-----QP 511 (677)
T ss_pred EeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhccc-----Cc
Confidence 999999999999988754 344589999999999999999999999999999999976 99999999999866 33
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccc-cccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCCC--C
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQ-VAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYDP--S 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~-~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~~--~ 257 (1553)
...+...++.+||+.||+||-+....+.-+ -...-++++++||||||||||+|+.|++||..-. ...-.....++ .
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHE 591 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcc
Confidence 344566788899999999999864332200 0112347899999999999999999999996322 33333333333 2
Q ss_pred CCCCCCCCHH-HHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSG-IRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~-l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++.+++.. +.++++.||.+||++||++.++|+|
T Consensus 592 Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 592 IEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 2566666554 9999999999999999999999998
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=322.36 Aligned_cols=287 Identities=17% Similarity=0.230 Sum_probs=246.1
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC--CcEEEEEeCCC
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH--SAQVVVGACDG 1209 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~--~~~las~s~DG 1209 (1553)
+..--|-..+|..+.||.|++.|||||.+|++|||...+.. ..+++.+|.+.|.++.|+|. +..+|+|+.||
T Consensus 168 ~~SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~------~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dg 241 (459)
T KOG0272|consen 168 VCSQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCN------LLQTLRGHTSRVGAAVFHPVDSDLNLATASADG 241 (459)
T ss_pred hhhhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcc------eeEEEeccccceeeEEEccCCCccceeeeccCC
Confidence 33334667899999999999999999999999999998775 66789999999999999997 56899999999
Q ss_pred cEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
++++|+++.. ....-..+|...|..++|+|+ |++|++++.|.+-++||++++......++ |
T Consensus 242 tvklw~~~~e--------------~~l~~l~gH~~RVs~VafHPs---G~~L~TasfD~tWRlWD~~tk~ElL~QEG--H 302 (459)
T KOG0272|consen 242 TVKLWKLSQE--------------TPLQDLEGHLARVSRVAFHPS---GKFLGTASFDSTWRLWDLETKSELLLQEG--H 302 (459)
T ss_pred ceeeeccCCC--------------cchhhhhcchhhheeeeecCC---CceeeecccccchhhcccccchhhHhhcc--c
Confidence 9999999731 111223467788889999999 88999999999999999999998876665 9
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1369 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~v 1369 (1553)
...|.+++|.|||..+++|+.|..-+|||+|++.++..+.. |..+|..+.| +| +|..+++||+|++++|
T Consensus 303 s~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~f-sP---------NGy~lATgs~Dnt~kV 371 (459)
T KOG0272|consen 303 SKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAF-SP---------NGYHLATGSSDNTCKV 371 (459)
T ss_pred ccccceeEecCCCceeeccCccchhheeecccCcEEEEecc-cccceeeEeE-CC---------CceEEeecCCCCcEEE
Confidence 99999999999999999999999999999999999998887 7788888888 44 5779999999999999
Q ss_pred EEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC-CC-eEE
Q 000410 1370 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP-GG-DLL 1447 (1553)
Q Consensus 1370 WDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp-~g-~ll 1447 (1553)
||++.-++..++. +|..-|..+.|+| .| +|+
T Consensus 372 WDLR~r~~ly~ip-----------------------------------------------AH~nlVS~Vk~~p~~g~fL~ 404 (459)
T KOG0272|consen 372 WDLRMRSELYTIP-----------------------------------------------AHSNLVSQVKYSPQEGYFLV 404 (459)
T ss_pred eeecccccceecc-----------------------------------------------cccchhhheEecccCCeEEE
Confidence 9999877655543 3334688899998 44 788
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccce
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1527 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1527 (1553)
|+|.|+++++|...+......+. ||.+.|
T Consensus 405 TasyD~t~kiWs~~~~~~~ksLa---------------------------------------------------GHe~kV 433 (459)
T KOG0272|consen 405 TASYDNTVKIWSTRTWSPLKSLA---------------------------------------------------GHEGKV 433 (459)
T ss_pred EcccCcceeeecCCCcccchhhc---------------------------------------------------CCccce
Confidence 99999999999987665554333 499999
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1528 LSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1528 ~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.++ .+++++.+++|+|.|.+||+|.
T Consensus 434 ~s~-Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 434 ISL-DISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEE-EeccCCceEEEeccCceeeecc
Confidence 999 6999999999999999999995
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=343.23 Aligned_cols=248 Identities=21% Similarity=0.269 Sum_probs=194.9
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||+|++. ++.||+|++...... .....+.+|+.+++.++||||+++++++.++...|+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE----GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTL 80 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc----ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEE
Confidence 37999999999999999999986 467999998654211 112345578889999999999999999999999999
Q ss_pred EeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++++|.+++... +.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+.
T Consensus 81 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 157 (303)
T cd07869 81 VFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--- 157 (303)
T ss_pred EEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC---
Confidence 9999999999988654 568999999999999999999999999999999999999999999999999987542211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----HHHHHh--cC-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRR--GQ- 253 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~--~~- 253 (1553)
.......+++.|+|||++.+ ...++.++||||+||++|||++|.+||.... +..... +.
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 224 (303)
T cd07869 158 ----HTYSNEVVTLWYRPPDVLLG---------STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTP 224 (303)
T ss_pred ----ccCCCCcccCCCCChHHHcC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCC
Confidence 11233457889999998742 2357889999999999999999999996421 111110 00
Q ss_pred -------------CCCCC-------C----CCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -------------YDPSQ-------H----LEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -------------~~~~~-------~----~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+.. . +.. ..+..+++||.+||+.||++|||++|+++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 225 NEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000 0 000 123568899999999999999999999998
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-35 Score=347.42 Aligned_cols=243 Identities=17% Similarity=0.203 Sum_probs=197.5
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||.||++++. +..||+|++.+... ........+.+|..+++.++||||+++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCC
Confidence 46999999999999985 36799999976411 112233456678899999999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------~ 151 (323)
T cd05595 79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-------T 151 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-------c
Confidence 69999998887899999999999999999999999999999999999999999999999998874321111 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||++. +..++.++|||||||++|||++|..||...+..............++...++.
T Consensus 152 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 221 (323)
T cd05595 152 MKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 221 (323)
T ss_pred cccccCCcCcCCccccc----------CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHH
Confidence 12345789999999764 34678899999999999999999999865543333222222222344556789
Q ss_pred HHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 268 IRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
++++|.+||+.||++|+ ++.++++|
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 222 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 99999999999999998 89999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=348.44 Aligned_cols=251 Identities=20% Similarity=0.246 Sum_probs=200.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
+|++.+.||+|+||.||++++. +..||+|++.+... .......+.+..|..+++.+ +||||++++++++.++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAAL-VQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAK 79 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCE
Confidence 4889999999999999999873 35699999975411 11223345567788899998 59999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.|+||||++ |+|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~ 159 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence 999999999 5999999888889999999999999999999999999999999999999999999999999987542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~ 254 (1553)
.. ......|++.|+|||.+.+ ...++.++|||||||++|||++|.+||... ....+.....
T Consensus 160 ~~------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 224 (332)
T cd05614 160 KE------RTYSFCGTIEYMAPEIIRG---------KGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL 224 (332)
T ss_pred CC------ccccccCCccccCHHHhcC---------CCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh
Confidence 11 1113457899999998742 224678999999999999999999999532 1222222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
.....++...++.++++|.+||+.||++|| +++++++|
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 225 KCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred cCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 223334555678999999999999999999 88899998
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=344.17 Aligned_cols=247 Identities=25% Similarity=0.284 Sum_probs=210.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
.|++.+.||+|.||.||+|+++. +.+|+|++.|..... ......+.+|+.+|+++. ||||+.++++|++...+|+
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~--~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG--KEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccc--cccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 68999999999999999999975 569999998873221 123456889999999998 9999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC----CcEEEeecCccccccCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW----NWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~----~~vkL~DFG~a~~~~~~ 177 (1553)
|||+|. |.|++++... .+++.++..++.|++.|++|||+.||+||||||||+|+... +.+|++|||+++....
T Consensus 114 vmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~- 191 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP- 191 (382)
T ss_pred EEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-
Confidence 999999 6999999877 49999999999999999999999999999999999999754 4799999999986521
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~ 253 (1553)
...+.+.+||+.|+|||++. ...|+..+||||+|+++|.|++|.+||...+ ..++..+.
T Consensus 192 -------~~~~~~~~Gtp~y~APEvl~----------~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~ 254 (382)
T KOG0032|consen 192 -------GERLHTIVGTPEYVAPEVLG----------GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGD 254 (382)
T ss_pred -------CceEeeecCCccccCchhhc----------CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCC
Confidence 33456778999999999664 4578999999999999999999999996544 44566777
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+..........+..++++|.+||..||.+|+++.++|+|.
T Consensus 255 ~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~Hp 294 (382)
T KOG0032|consen 255 FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHP 294 (382)
T ss_pred CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCc
Confidence 7644433333467999999999999999999999999983
|
|
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=361.84 Aligned_cols=257 Identities=21% Similarity=0.231 Sum_probs=212.1
Q ss_pred ccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEE-EEEe---
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQF-WQET--- 96 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~-~~~~--- 96 (1553)
.+++++.+.|.+|||+.||+|++.+ ..||+|.+... .+...+.+.+|+++|+.|. |||||.|++ ....
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-----CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 4489999999999999999999965 46999998654 3556677899999999997 999999999 3321
Q ss_pred ---CCEEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEecCCcEEEeec
Q 000410 97 ---DKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 97 ---~~~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~g--IvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
...++|.||||. |.|-|++.++ ..|++.++++|+.|+++|+.+||... |||||||-|||||+.+|..|||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 135789999999 6999999754 45999999999999999999999998 999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeee--cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFD--TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL 246 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~--~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~ 246 (1553)
|.+.....+.....+..+.-+ ....|+.|+|||++. +..+.++++|+|||+|||+||-|+....||+....
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMID-------lysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~ 263 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMID-------LYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK 263 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHh-------hhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc
Confidence 998755444332222222111 112488999999985 45677899999999999999999999999998877
Q ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.++..+.|..++. + ..+..+++||+.||+.||++||++.|++.++.
T Consensus 264 laIlng~Y~~P~~-p-~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 264 LAILNGNYSFPPF-P-NYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred eeEEeccccCCCC-c-cHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 8888888875442 2 33568999999999999999999999998754
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-35 Score=348.16 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=198.6
Q ss_pred EEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|+.. ++.||+|++.+.... ........+..|+.+++.++||||++++++++.++..|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV-RNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH-hhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 68999999999999863 356999999764111 112233456788899999999999999999999999999999
Q ss_pred ccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCc
Q 000410 106 YFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
|+. ++|.+++...+.+.+..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 155 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT----- 155 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-----
Confidence 999 59999998888899999999999999999999999999999999999999999999999999874321111
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIP 264 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 264 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|.+||..................++...
T Consensus 156 --~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 223 (323)
T cd05584 156 --VTHTFCGTIEYMAPEILM----------RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYL 223 (323)
T ss_pred --cccccCCCccccChhhcc----------CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 112345789999999764 33567899999999999999999999976654443332222233345556
Q ss_pred CHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 265 DSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
++.++++|.+||+.||++|| +++++++|
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 78899999999999999999 89999988
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=348.50 Aligned_cols=251 Identities=20% Similarity=0.288 Sum_probs=196.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC-----C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD-----K 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~-----~ 98 (1553)
+|++.+.||+|+||.||+|++.. ..||||++..... .......+.+|+++++.++||||+++++++... .
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 77 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE---HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK 77 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc---cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCc
Confidence 48999999999999999999863 6799999864311 112234567888999999999999999987543 3
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|+||||++++|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 78 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 78 DIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred eEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 58999999999999999888789999999999999999999999999999999999999999999999999987542221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH---------
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY--------- 249 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~--------- 249 (1553)
.. ........|++.|+|||.+.+. ...++.++|||||||++|||++|++||........
T Consensus 158 ~~----~~~~~~~~~t~~y~aPE~~~~~--------~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~ 225 (338)
T cd07859 158 PT----AIFWTDYVATRWYRAPELCGSF--------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLG 225 (338)
T ss_pred Cc----cccccCCCCCCCcCCHHHHhcc--------ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhC
Confidence 11 1122345678999999977421 24678899999999999999999999964332110
Q ss_pred ------------------HhcCC--CCC---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 ------------------RRGQY--DPS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ------------------~~~~~--~~~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..... .+. ..++ ..++.+.++|.+||+.||++||+++|+++|
T Consensus 226 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 226 TPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 000 0112 235678999999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=313.25 Aligned_cols=257 Identities=22% Similarity=0.303 Sum_probs=201.1
Q ss_pred ccceEEEEEeeccCcEEEEEEEE--CCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-----
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----- 96 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~--~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~----- 96 (1553)
..+|.+.+.||.|||+.||++++ .++.||+|.+.... .+..+...+|++..++++||||++++++...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 34899999999999999999986 45779999987652 3445567788899999999999998776532
Q ss_pred CCEEEEEecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEecCCcEEEeecC
Q 000410 97 DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVLVTSWNWLYLSDFA 169 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~g--IvHrDIKp~NILv~~~~~vkL~DFG 169 (1553)
....||+++|+. |+|.|.+.. ..++++.++.+|+.+|++||++||+.. ++||||||.|||+++.+.++|.|||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence 345999999999 899998853 347999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCCcceeee--cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-
Q 000410 170 SFKPTYIPYDDPSDFSFFFD--TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL- 246 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~--~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~- 246 (1553)
++....+.-.+..+.....+ ....|..|+|||.|. +..+...++++|||||||++|+|+.|..||+..-.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~-------vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~ 247 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFN-------VKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ 247 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchhee-------cccCcccccccchhhhhHHHHHHHHcCCcchHHhhc
Confidence 98765443322222111111 123477899999996 34456789999999999999999999999973221
Q ss_pred -----HHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 -----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...+.+..+. ....++.+.++|+.||+.||.+||++.+++.+..
T Consensus 248 GgSlaLAv~n~q~s~P~--~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPN--SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred CCeEEEeeeccccccCC--CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 112222232211 1235789999999999999999999999998854
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=343.67 Aligned_cols=260 Identities=17% Similarity=0.164 Sum_probs=209.8
Q ss_pred ccccCCCccceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe
Q 000410 17 YLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET 96 (1553)
Q Consensus 17 ~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~ 96 (1553)
+.-+++.. ++.+.+.||+|+||+||+|++.+ .||||++...... .+..+.|+.|+..+++-+|.||+-|.+++..
T Consensus 385 ~~WeIp~~-ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt---~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 385 EEWEIPPE-EVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPT---PEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccCHH-Hhhccceeccccccceeeccccc-ceEEEEEecCCCC---HHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 33344432 67889999999999999999874 5999999776432 3467889999999999999999999999988
Q ss_pred CCEEEEEeccccC-CHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 97 DKAAYLLRQYFFN-SLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 ~~~~~lV~E~~~g-sL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
+.. .||+++|+| +||.+|... ..+.....+.|++||++|+.|||.++|||||||..||++.+++.|||+|||++...
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred Cce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 876 999999997 999999753 45899999999999999999999999999999999999999999999999998543
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----H
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----R 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~ 250 (1553)
..- .-..-+....|..+|||||++.. ....+|++.+||||||||+|||++|..||......++ -
T Consensus 539 ~~w-----~g~~q~~qp~gsilwmAPEvIRm-------qd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVG 606 (678)
T KOG0193|consen 539 TRW-----SGEQQLEQPHGSLLWMAPEVIRM-------QDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVG 606 (678)
T ss_pred eee-----ccccccCCCccchhhhcHHHHhh-------cccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEec
Confidence 211 11122345567899999999973 2367899999999999999999999999975444332 2
Q ss_pred hcCCCCCC-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 251 RGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+|...+.. .......+++++|+..||..++++||.+.++|..++
T Consensus 607 rG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 607 RGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred ccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 33223322 222334468999999999999999999999998754
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=345.13 Aligned_cols=278 Identities=22% Similarity=0.255 Sum_probs=230.2
Q ss_pred CCccceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 22 PSSYNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 22 ~~~~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
.....|.+.+.||+|.|++|.++++. ++.||||++.|.. .+ ....+.+.+|+++|+.++||||++++.++++...
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~--ln-~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ--LN-PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcc--cC-hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 33447999999999999999999996 4679999997762 12 2333448889999999999999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+|+||||+. |.+++++.+.+.+.+.+++.++.|+++|++|||+++|||||||.+|||++.+..+||+|||++...
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~---- 205 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFF---- 205 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceee----
Confidence 999999999 699999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQ 258 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~ 258 (1553)
+...+..+.+|++.|.|||+|.+..+ .++++|+||+|+++|.|+.|..||++..+...+........
T Consensus 206 ----~~~~~lqt~cgsppyAaPEl~~g~~y---------~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~ 272 (596)
T KOG0586|consen 206 ----DYGLMLQTFCGSPPYAAPELFNGKKY---------DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY 272 (596)
T ss_pred ----cccccccccCCCCCccChHhhcCccc---------CCcceehhhhhhhheeeeecccccCCcccccccchheeeee
Confidence 23445678899999999999986543 47899999999999999999999999888776655544444
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh-cccCCCCCCchhhhhhccCCCCCCcchh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA-AVVFPTYFSPFLHNFYCCWNPLHSDMRV 322 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~-~~~fP~~f~~fl~~~~~~~~~~~~~~r~ 322 (1553)
.++...+.+++++|++||..+|.+|++++++.+|.| ...+.. ..+.++.....+.....|+
T Consensus 273 rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~---~~l~p~~e~~~~~~~~~r~ 334 (596)
T KOG0586|consen 273 RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA---RLLAPLIERSTPFILAKRI 334 (596)
T ss_pred cccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh---hhhhcccccCccchhhHHH
Confidence 455555678999999999999999999999999855 333332 3444455443444444444
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=346.59 Aligned_cols=247 Identities=22% Similarity=0.269 Sum_probs=210.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE-EEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA-AYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~-~~l 102 (1553)
+|.+++.+|+|+||.+++++++. ..+|+|.+....... ...+....|..+++++.||||+.|.+.|+.++. .+|
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~---~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE---PERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc---hhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 68899999999999999999875 569999987653222 222356678899999999999999999988887 999
Q ss_pred Eecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 103 LRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
||+||+ |+|.+.|.+. ..++++.+.+|+.|++.||.|||+++|+|||||+.||+++.++.|+|+|||+||....+.
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 999999 5999999654 458999999999999999999999999999999999999999999999999999763221
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCC-C
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPS-Q 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~-~ 258 (1553)
.+..+..||+.|+.||++. +.+|+.|+|||||||++|||++-+++|...+...+........ .
T Consensus 161 ------~~a~tvvGTp~YmcPEil~----------d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~ 224 (426)
T KOG0589|consen 161 ------SLASTVVGTPYYMCPEILS----------DIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS 224 (426)
T ss_pred ------hhhheecCCCcccCHHHhC----------CCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC
Confidence 1335678999999999764 5689999999999999999999999999888766544333322 3
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...+.+++.||..||..+|..||++.++|.+
T Consensus 225 Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 4566677899999999999999999999999987
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=336.82 Aligned_cols=246 Identities=17% Similarity=0.183 Sum_probs=197.1
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|+..+.||+|+||.||+|.+. +..||+|++.+... ........+.+|..+++.++|+||+++++++.+++..|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhh--hhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence 788999999999999999875 46799999865421 11223345667889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ |+|.+++.. ...+++.++..++.|++.||+|||++||+||||||+|||+++++.++|+|||++.......
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 156 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE--- 156 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC---
Confidence 9999 699888753 3358999999999999999999999999999999999999999999999999987541110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~ 257 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|++||..... ..+........
T Consensus 157 -----~~~~~~g~~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05631 157 -----TVRGRVGTVGYMAPEVIN----------NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ 221 (285)
T ss_pred -----eecCCCCCCCccCHhhhc----------CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc
Confidence 112345788999999764 34678899999999999999999999975321 22222222222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
...+...++.+.+||.+||+.||++||+ ++++++|
T Consensus 222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 2344445678999999999999999997 8999988
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=350.65 Aligned_cols=254 Identities=18% Similarity=0.190 Sum_probs=201.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||+||+|++.. +.||||++.+... ........+.+|+.+++.++||||+++++++.++...|+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 68999999999999999999863 6799999976411 1123445677889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||+++..........
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 99998 69999998888899999999999999999999999999999999999999999999999999875422111000
Q ss_pred Cc-------------------------------ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHH
Q 000410 183 DF-------------------------------SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 231 (1553)
Q Consensus 183 ~~-------------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 231 (1553)
.. .....+..||+.|+|||++. ...++.++|||||||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il 229 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL----------QTGYNKECDWWSLGVIM 229 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc----------CCCCCCeeeeecchhHH
Confidence 00 00111245899999999774 34578899999999999
Q ss_pred HHHHcCCCCCCchHHHHH----HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHHHh
Q 000410 232 AELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS---AESYLQN 292 (1553)
Q Consensus 232 ~eLltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 292 (1553)
|||++|.+||........ ...............++.+++||.+||. +|.+|++ ++|+++|
T Consensus 230 ~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 230 YEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred HHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999999999975543322 1111111111111346789999999997 9999998 9999998
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=347.13 Aligned_cols=245 Identities=19% Similarity=0.200 Sum_probs=201.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.+... ........+..|+++++.++||||++++++++.+...|+|
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL--FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 68999999999999999999864 6799999976411 1123345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------ 153 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------ 153 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc------
Confidence 99998 59999998888899999999999999999999999999999999999999999999999999875421
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCC-C
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDP-S 257 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~-~ 257 (1553)
......|++.|+|||.+. +..++.++|||||||++|||++|.+||........ ....... .
T Consensus 154 ----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 219 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLR----------GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR 219 (333)
T ss_pred ----ccCCcccCccccChhHhc----------CCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC
Confidence 123445789999999764 34678899999999999999999999976543322 2111110 1
Q ss_pred CCCC---CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLE---KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~---~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+... ...++++.++|.+||..+|.+||+++++++|
T Consensus 220 ~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 220 PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1111 1336789999999999999999999999998
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=326.82 Aligned_cols=269 Identities=24% Similarity=0.256 Sum_probs=209.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|++.+.||+|.-|+||+|+..+ ..+|+||+.|. ......-..+.+.|.+||+.++||.++.+|..|++++..|++
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~--~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKE--SLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHH--HHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 57788999999999999999987 56999999876 222344456778888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC-C--
Q 000410 104 RQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI-P-- 177 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~-~-- 177 (1553)
||||+ |+|....++++ .+++..++.++.+++.||+|||..|||+||||||||||-++|++.|+||.++..... |
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 99999 59999887654 599999999999999999999999999999999999999999999999987643211 0
Q ss_pred --CCC--------------CCCcc------------------------------eeeecCCCCccccCcchhcccCCccc
Q 000410 178 --YDD--------------PSDFS------------------------------FFFDTGGKRLCYLAPERFYEHGGEMQ 211 (1553)
Q Consensus 178 --~~~--------------~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~ 211 (1553)
... +..|. .......||-.|+|||++.+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G------ 309 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG------ 309 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec------
Confidence 000 00000 11123457888999997764
Q ss_pred cccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC--CCCHHHHHHHHHhcccCcCCCCC----
Q 000410 212 VAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFS---- 285 (1553)
Q Consensus 212 ~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~LI~~mL~~dP~~Rps---- 285 (1553)
...+.++|.|+||+++|||+.|..||.+.+-.+-..........++. ..+..+++||+++|.+||.+|..
T Consensus 310 ----~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rG 385 (459)
T KOG0610|consen 310 ----EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRG 385 (459)
T ss_pred ----CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccc
Confidence 45678999999999999999999999876554433333322222222 33468999999999999999997
Q ss_pred HHHHHHhhhcccCCCCCCchhhhhhccC
Q 000410 286 AESYLQNYAAVVFPTYFSPFLHNFYCCW 313 (1553)
Q Consensus 286 a~elL~~~~~~~fP~~f~~fl~~~~~~~ 313 (1553)
|+||-+| ++|...-+..+...
T Consensus 386 A~eIK~H-------pFF~gVnWaLir~~ 406 (459)
T KOG0610|consen 386 AAEIKRH-------PFFEGVNWALIRCA 406 (459)
T ss_pred hHHhhcC-------ccccCCChhheecc
Confidence 9999988 55655434444433
|
|
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=352.20 Aligned_cols=254 Identities=19% Similarity=0.257 Sum_probs=202.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. ++.||+|++.+... ........+.+|.+++..++||||+++++++.+++..|+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM--IKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHH--hhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 6899999999999999999997 56799999976411 1123345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC-
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP- 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~- 181 (1553)
|||++ ++|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 99998 6999999888889999999999999999999999999999999999999999999999999987653322000
Q ss_pred ---------------------CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC
Q 000410 182 ---------------------SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 240 (1553)
Q Consensus 182 ---------------------~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 240 (1553)
...........|++.|+|||++. +..++.++|||||||++|||++|.+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR----------GTPYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHc----------CCCCCCceeeEecchhhhhhccCCCC
Confidence 00011123445789999999775 33678999999999999999999999
Q ss_pred CCchHHHHHHhcCCC--CCCCCCC--CCCHHHHHHHHHhcccCcCCCCC-HHHHHHh
Q 000410 241 FELSHLLAYRRGQYD--PSQHLEK--IPDSGIRKMILHMIQLEPELRFS-AESYLQN 292 (1553)
Q Consensus 241 f~~~~~~~~~~~~~~--~~~~~~~--~~~~~l~~LI~~mL~~dP~~Rps-a~elL~~ 292 (1553)
|.............. ....++. ..++.+++||.+||. ||.+||+ ++++++|
T Consensus 230 f~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 230 FYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 975543222111111 1111222 246889999999997 9999999 9999998
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=342.91 Aligned_cols=248 Identities=17% Similarity=0.171 Sum_probs=198.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCC-CeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP-HVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hp-nIv~~~~~~~~~~~~~l 102 (1553)
+|++.+.||+|+||.||+|++.+ +.||+|++.+... ......+.+..|.+++..+.|+ +|+++++++.+.+..|+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI--IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 78 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEE
Confidence 58899999999999999999865 5699999976421 1122234456677788888764 58889999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ |+|.+++...+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-- 156 (324)
T cd05587 79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK-- 156 (324)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC--
Confidence 999998 69999998888899999999999999999999999999999999999999999999999998864321111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
......|++.|+|||++. +..++.++||||+||++|||++|++||..................++
T Consensus 157 -----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~ 221 (324)
T cd05587 157 -----TTRTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP 221 (324)
T ss_pred -----ceeeecCCccccChhhhc----------CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 122345789999999764 34578899999999999999999999976554333322222233345
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
...++.+.++|.+||..||.+|+++ +++++|
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 5567899999999999999999976 677777
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=343.90 Aligned_cols=243 Identities=20% Similarity=0.220 Sum_probs=195.2
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||.||+|++.. +.||+|++.+... ......+.+..|..++..+ +||||+++++++++.+..|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI--LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH--hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCC
Confidence 469999999999999864 5799999975411 1112233444555666655 7999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~------- 151 (320)
T cd05590 79 NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK------- 151 (320)
T ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-------
Confidence 9 59999998877899999999999999999999999999999999999999999999999999875321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|.+||.......+...........+...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQ----------EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQ 221 (320)
T ss_pred cccccccCccccCHHHHc----------CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCH
Confidence 122345789999999774 3457889999999999999999999997665544433333333334555678
Q ss_pred HHHHHHHHhcccCcCCCCCH------HHHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSA------ESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa------~elL~~ 292 (1553)
.++++|.+||+.||++||++ +++++|
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 99999999999999999998 778877
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=345.03 Aligned_cols=244 Identities=21% Similarity=0.261 Sum_probs=191.8
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||+||+|++. ++.||+|++.+.... ........+.++..+++.++||||+++++.++++...|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL-KKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 46999999999999985 367999999764211 111222223333345678999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++..++.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-------~ 152 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK-------T 152 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC-------c
Confidence 59999998888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||++. +..++.++|||||||++|||++|.+||...+..............++...++.
T Consensus 153 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 222 (323)
T cd05575 153 TSTFCGTPEYLAPEVLR----------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVS 222 (323)
T ss_pred cccccCChhhcChhhhc----------CCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHH
Confidence 12345789999999764 34678899999999999999999999976554443322222222233344678
Q ss_pred HHHHHHHhcccCcCCCCCH----HHHHHh
Q 000410 268 IRKMILHMIQLEPELRFSA----ESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rpsa----~elL~~ 292 (1553)
+.++|.+||+.||.+||++ .++++|
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 9999999999999999988 577766
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=337.71 Aligned_cols=246 Identities=21% Similarity=0.224 Sum_probs=187.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC---CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHh---cCCCCCeeEEEEEEE----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD---EGLVLVKVYFKRGDYIDLREYERRLFHIRETFR---SIDHPHVWAFQFWQE---- 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~---~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~---~l~hpnIv~~~~~~~---- 95 (1553)
+|++.+.||+|+||+||+|++. +..||+|++......... ...+.+|..+++ .++||||+++++++.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~ 78 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM---PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 78 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc---hHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence 6889999999999999999873 245999998654221111 112233444444 457999999999875
Q ss_pred -eCCEEEEEeccccCCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 96 -TDKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 96 -~~~~~~lV~E~~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
.....++||||+.++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 79 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 79 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 34568999999999999998653 348999999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HH
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LA 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~ 248 (1553)
..... .......|++.|+|||.+. ...++.++|||||||++|||++|.+||..... ..
T Consensus 159 ~~~~~--------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~ 220 (290)
T cd07862 159 IYSFQ--------MALTSVVVTLWYRAPEVLL----------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 220 (290)
T ss_pred eccCC--------cccccccccccccChHHHh----------CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHH
Confidence 54211 1123445788999999774 33578899999999999999999999975432 11
Q ss_pred HHhcCC-CCC----------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQY-DPS----------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~-~~~----------------------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+..... ... ..+....++.+++||.+||+.||++|||+.|+|+|
T Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 221 ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred HHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 111100 000 00111235678999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-34 Score=338.08 Aligned_cols=248 Identities=21% Similarity=0.355 Sum_probs=194.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|++..... .....+.+.+|+.+++.++||||++++++++.++..|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE---NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc---cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEE
Confidence 68999999999999999999964 5699999875421 123345667788999999999999999999999999999
Q ss_pred eccccCCHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLS-TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~-~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++++.+.+. ....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN--- 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc---
Confidence 9999976555554 345689999999999999999999999999999999999999999999999999875421111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhc------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRG------ 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~------ 252 (1553)
.......|++.|+|||.+. +..++.++||||+||++|||++|++||...... .+...
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd07848 156 ---ANYTEYVATRWYRSPELLL----------GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPA 222 (287)
T ss_pred ---ccccccccccccCCcHHHc----------CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCH
Confidence 0112345788899999774 335788999999999999999999999643211 11100
Q ss_pred ----------CCC----CC--------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ----------QYD----PS--------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ----------~~~----~~--------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+. +. .......+..+.+||.+||+.||++|||++|+|+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 223 EQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 00 00111245679999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=346.58 Aligned_cols=243 Identities=18% Similarity=0.206 Sum_probs=197.7
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||+||+|++.. ..||+|++.+... ........+..|.++++.++||||+++++++..+...|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 469999999999999853 6799999976421 112233455677889999999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
|+|.+++.....+++.+++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------- 151 (325)
T cd05594 79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA------- 151 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-------
Confidence 5999999887789999999999999999999997 8999999999999999999999999999874321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|..||..................++...++
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 221 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSP 221 (325)
T ss_pred ccccccCCcccCCHHHHc----------cCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCH
Confidence 112345789999999774 3467889999999999999999999997655443333222222334555678
Q ss_pred HHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 267 GIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
.+.++|.+||+.||++|+ ++.++++|
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 999999999999999997 89999998
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=346.24 Aligned_cols=248 Identities=17% Similarity=0.196 Sum_probs=193.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.... .......+.+|..+++.+ +||||+++++++...
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA----TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc----chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 7999999999999999999752 1459999986431 122345677888999999 899999999987654
Q ss_pred -CEEEEEecccc-CCHHHHhcCC---------------------------------------------------------
Q 000410 98 -KAAYLLRQYFF-NSLRDRLSTP--------------------------------------------------------- 118 (1553)
Q Consensus 98 -~~~~lV~E~~~-gsL~d~l~~~--------------------------------------------------------- 118 (1553)
..+|+||||++ |+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 46899999999 6999988642
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCC
Q 000410 119 -----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK 193 (1553)
Q Consensus 119 -----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~g 193 (1553)
..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~~~ 238 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGSARL 238 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-----hhcccCCCC
Confidence 2377888999999999999999999999999999999999999999999999875421110 011123345
Q ss_pred CccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH----HHHHhcCCCCCCCCCCCCCHHH
Q 000410 194 RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL----LAYRRGQYDPSQHLEKIPDSGI 268 (1553)
Q Consensus 194 t~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~l 268 (1553)
++.|+|||.+. +..++.++|||||||++|||++ |.+||..... ....... .....+...++.+
T Consensus 239 ~~~y~aPE~~~----------~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 306 (338)
T cd05102 239 PLKWMAPESIF----------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDG--TRMRAPENATPEI 306 (338)
T ss_pred CccccCcHHhh----------cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcC--CCCCCCCCCCHHH
Confidence 67899999764 3467889999999999999997 8999975321 1111111 1122344556789
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 269 RKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 269 ~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+++|.+||+.||++||++.|+++.++
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~ 332 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILG 332 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=350.25 Aligned_cols=241 Identities=20% Similarity=0.205 Sum_probs=190.9
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||+|.+.. +.||+|+... ..+.+|+++++.++||||+++++++..+...++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEE
Confidence 379999999999999999999864 6699996422 235678899999999999999999999999999
Q ss_pred EeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|+|++.++|.+++..+..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 161 v~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~--- 237 (391)
T PHA03212 161 ILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA--- 237 (391)
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc---
Confidence 99999999999998877899999999999999999999999999999999999999999999999999864311110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC-CCch----------HHHHHHh
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF-FELS----------HLLAYRR 251 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p-f~~~----------~~~~~~~ 251 (1553)
.......||+.|+|||++. +..++.++|||||||++|||++|.+| |... .+..+..
T Consensus 238 ---~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~ 304 (391)
T PHA03212 238 ---NKYYGWAGTIATNAPELLA----------RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIR 304 (391)
T ss_pred ---cccccccCccCCCChhhhc----------CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHH
Confidence 0112345899999999764 34678999999999999999999654 4211 1111100
Q ss_pred --cC------------------------CC-C--CCCCCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 --GQ------------------------YD-P--SQHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 --~~------------------------~~-~--~~~~~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+. .. + .+.+.. ..+.++.+||.+||+.||++||||+|+|+|
T Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 305 RSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 00 0 000000 123578999999999999999999999998
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=344.48 Aligned_cols=254 Identities=20% Similarity=0.197 Sum_probs=197.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+... ........+.+|+.++..++||||+++++.+++....|+|
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM--LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 68999999999999999998864 6799999976411 1223445678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 99998 599999988888999999999999999999999999999999999999999999999999998754211000
Q ss_pred --------CCCcc------------------eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHH
Q 000410 181 --------PSDFS------------------FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234 (1553)
Q Consensus 181 --------~~~~~------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 234 (1553)
+.++. .......||+.|+|||++. +..++.++|||||||++|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~----------~~~~~~~~DvwSlGvil~el 229 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM----------QTGYNKLCDWWSLGVIMYEM 229 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc----------CCCCCCchhhhhhHHHHHHH
Confidence 00000 0012346899999999874 34578899999999999999
Q ss_pred HcCCCCCCchHHHHH----HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcC---CCCCHHHHHHh
Q 000410 235 FLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPE---LRFSAESYLQN 292 (1553)
Q Consensus 235 ltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~---~Rpsa~elL~~ 292 (1553)
++|.+||........ ...............++.++++|.+|+. +|. .||+++|+++|
T Consensus 230 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 230 LIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 999999975443322 2111111100011235789999999875 444 45899999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=341.52 Aligned_cols=246 Identities=19% Similarity=0.205 Sum_probs=194.6
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHH---HhcCCCCCeeEEEEEEEeCCEEE
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRET---FRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~---l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
|++.+.||+|+||.||+|.+.. +.||||++.+... ......+.+..|.++ ++.++||||+++++++++.+..|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDI--IARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence 6789999999999999998863 6799999976421 111223345555444 45678999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||++ ++|..++.. ..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 156 (324)
T cd05589 79 FVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD- 156 (324)
T ss_pred EEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC-
Confidence 9999999 599888865 4599999999999999999999999999999999999999999999999998864321111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHL 260 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~ 260 (1553)
...+..|++.|+|||.+. +..++.++|||||||++|||++|.+||...................
T Consensus 157 ------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~ 220 (324)
T cd05589 157 ------RTSTFCGTPEFLAPEVLT----------ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRY 220 (324)
T ss_pred ------cccccccCccccCHhHhc----------CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 112445789999999764 3457889999999999999999999997655443322222222234
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
+...++.+.++|.+||+.||.+|| ++.++++|
T Consensus 221 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 221 PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 445578899999999999999999 68888887
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-34 Score=341.42 Aligned_cols=248 Identities=17% Similarity=0.162 Sum_probs=197.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|.+.+.||+|+||.||+|++.+ ..||+|++.+... ......+....|..++..+ +||+|+++++++.+.+..|+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV--IQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYF 78 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEE
Confidence 57889999999999999999865 5699999976421 1122223344555666665 58999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ |+|.+++...+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~--- 155 (323)
T cd05616 79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG--- 155 (323)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC---
Confidence 999998 6999999887789999999999999999999999999999999999999999999999999987432111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
.......|++.|+|||++. ...++.++|||||||++|||++|.+||..................++
T Consensus 156 ----~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p 221 (323)
T cd05616 156 ----VTTKTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP 221 (323)
T ss_pred ----CccccCCCChhhcCHHHhc----------CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 1122345789999999774 34678999999999999999999999976554333222222222344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
...++++.++|.+||+.||.+|+++ .++++|
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 5567899999999999999999984 677766
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=340.75 Aligned_cols=243 Identities=16% Similarity=0.187 Sum_probs=193.0
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||.||+|++.. ..||+|++.+.... .......+..|..++.. .+||||+++++++.+++..|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL--IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC
Confidence 479999999999999864 57999999764211 11122334445556654 58999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |+|.+++..++.+++.++..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 79 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------- 151 (316)
T cd05620 79 NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN------- 151 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-------
Confidence 9 59999998887899999999999999999999999999999999999999999999999998864321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|.+||..................++...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (316)
T cd05620 152 RASTFCGTPDYIAPEILQ----------GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITK 221 (316)
T ss_pred ceeccCCCcCccCHHHHc----------CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCH
Confidence 123445789999999774 3467889999999999999999999997655443333222223334555678
Q ss_pred HHHHHHHHhcccCcCCCCCH-HHHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSA-ESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa-~elL~~ 292 (1553)
+++++|.+||+.||++||++ +++++|
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 99999999999999999998 577777
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=341.99 Aligned_cols=243 Identities=19% Similarity=0.207 Sum_probs=195.5
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||.||+|++.+ ..||+|++.+... ......+.+..|.+++..+ +||||+++++++++++..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI--LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh--hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC
Confidence 469999999999999864 5799999976411 1122233455566777655 7999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~------- 151 (321)
T cd05591 79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV------- 151 (321)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-------
Confidence 9 59999998877899999999999999999999999999999999999999999999999998875322111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|.+||...................+...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 221 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQ----------ELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSK 221 (321)
T ss_pred cccccccCccccCHHHHc----------CCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Confidence 112345788999999764 3467889999999999999999999997665444333322222334445678
Q ss_pred HHHHHHHHhcccCcCCCC-------CHHHHHHh
Q 000410 267 GIRKMILHMIQLEPELRF-------SAESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rp-------sa~elL~~ 292 (1553)
++.++|.+||+.||++|+ +++++++|
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 999999999999999999 89999988
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=339.38 Aligned_cols=243 Identities=17% Similarity=0.206 Sum_probs=192.1
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.+ +.||+|++.+.... .....+.+..|..++.. .+||||+++++++..+...|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL--EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 469999999999999864 56999999764211 11122233344455554 48999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... .
T Consensus 79 ~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-------~ 151 (316)
T cd05592 79 NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-------G 151 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-------C
Confidence 8 6999999888889999999999999999999999999999999999999999999999999987542211 1
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|..||...+..............++...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (316)
T cd05592 152 KASTFCGTPDYIAPEILK----------GQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISK 221 (316)
T ss_pred ccccccCCccccCHHHHc----------CCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Confidence 123345789999999774 3457889999999999999999999997655443332222223345556678
Q ss_pred HHHHHHHHhcccCcCCCCCHH-HHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSAE-SYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa~-elL~~ 292 (1553)
.+.++|.+||+.||.+||++. ++++|
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 899999999999999999865 66666
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=344.71 Aligned_cols=252 Identities=17% Similarity=0.202 Sum_probs=200.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++.+... ......+.+.+|+.+++.++||||+++++++++++..|+|
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 44 DFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM--IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 79999999999999999999864 5799999965311 1122334467788999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~---- 196 (370)
T cd05596 122 MEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG---- 196 (370)
T ss_pred EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC----
Confidence 99998 6999998765 48999999999999999999999999999999999999999999999999987542111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.....+..|++.|+|||++.... ....++.++|||||||++|||++|.+||....... +.........
T Consensus 197 --~~~~~~~~gt~~y~aPE~~~~~~------~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (370)
T cd05596 197 --MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTF 268 (370)
T ss_pred --cccCCCCCCCcCeECHHHhccCC------CCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCC
Confidence 11123456899999999885321 13457899999999999999999999997654432 2222211111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
......+..+++||.+||+.+|.+ |++++++++|
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 269 PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 111234678999999999999988 9999999998
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-34 Score=340.65 Aligned_cols=243 Identities=18% Similarity=0.231 Sum_probs=193.7
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.. ..||+|++.+... ........+..|..+++.+ +||||+++++++++++..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV--NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence 469999999999999864 5699999976421 1223345567788888887 7999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....+..
T Consensus 79 ~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~------- 151 (329)
T cd05588 79 SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD------- 151 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC-------
Confidence 9 59999998777899999999999999999999999999999999999999999999999999874321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--------HHH-HHhcCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--------LLA-YRRGQYDPS 257 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--------~~~-~~~~~~~~~ 257 (1553)
...+..|++.|+|||++. +..++.++|||||||++|+|++|.+||+... ... ..+......
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (329)
T cd05588 152 TTSTFCGTPNYIAPEILR----------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ 221 (329)
T ss_pred ccccccCCccccCHHHHc----------CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC
Confidence 122346789999999774 3467889999999999999999999996211 111 111111112
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 292 (1553)
..++...+..+.++|.+||+.||.+|++ ++++++|
T Consensus 222 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 222 IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 2244455678999999999999999997 7889888
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=341.89 Aligned_cols=241 Identities=22% Similarity=0.241 Sum_probs=207.0
Q ss_pred EeeccCcEEEEEEEECCc--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-
Q 000410 32 VLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF- 108 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~- 108 (1553)
+||+|.||+||-|++... .+|||-+..+ ...+.+-+.+|+..-+.+.|.|||+|++.+..++++-|.||-++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek-----dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK-----DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc-----cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCC
Confidence 799999999999999764 4788877543 23445667888889999999999999999999999999999999
Q ss_pred CCHHHHhcCC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCCCCCCCCc
Q 000410 109 NSLRDRLSTP-PFL--SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 109 gsL~d~l~~~-~~l--~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
|+|.+++... +++ .+...-.+.+||++||.|||++.|||||||-+||||+. .|.+||+|||.+|... ..
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-------gi 729 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-------GI 729 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc-------cC
Confidence 6999999764 567 78889999999999999999999999999999999975 5899999999988652 23
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC---chHHHHHHhcCCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE---LSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~---~~~~~~~~~~~~~~~~~~~ 261 (1553)
.....+..||..|||||++. .....|++++|||||||++.||.||+|||. ..+...++-|.|...+.++
T Consensus 730 nP~TETFTGTLQYMAPEvID--------qG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iP 801 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVID--------QGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIP 801 (1226)
T ss_pred CccccccccchhhhChHhhc--------cCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCc
Confidence 33446677999999999885 334579999999999999999999999995 3455567788888777788
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+.+++.+|.+|+.+||.+||+|.++|++
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 8888899999999999999999999999986
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=345.93 Aligned_cols=255 Identities=18% Similarity=0.166 Sum_probs=197.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|++.+.||+|+||+||+|++.. ..||+|++.+... ........+..|+++++.++||||+++++++.+....|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEE
Confidence 58899999999999999999854 5699999976421 1233455688889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99998 599999988778999999999999999999999999999999999999999999999999987533110000
Q ss_pred -------------CC-------------------------CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcc
Q 000410 181 -------------PS-------------------------DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222 (1553)
Q Consensus 181 -------------~~-------------------------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~ 222 (1553)
+. .......+..||+.|+|||++. +..++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----------~~~~~~~~ 229 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL----------RKGYTQLC 229 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc----------CCCCCCcc
Confidence 00 0000012346899999999874 34578899
Q ss_pred cHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcc--cCcCCCCCHHHHHHh
Q 000410 223 DIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQ--LEPELRFSAESYLQN 292 (1553)
Q Consensus 223 DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~--~dP~~Rpsa~elL~~ 292 (1553)
|||||||++|||++|.+||....... +...............++++++||.+|+. .+|..|++++++++|
T Consensus 230 DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 230 DWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred ceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99999999999999999996543322 11111111111112346789999999664 455559999999998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=337.96 Aligned_cols=244 Identities=15% Similarity=0.112 Sum_probs=198.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.. ..+|+|++.... .......+.+|+++++.++||||+++++++..++..|+|
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 6 DFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 79999999999999999999864 568999886531 234556788899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 157 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 157 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc----
Confidence 99999 59999998877899999999999999999999986 6999999999999999999999999988754211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-------
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY------- 254 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~------- 254 (1553)
......|++.|+|||.+. +..++.++|||||||++|||++|+.||.......+.....
T Consensus 158 -----~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 222 (331)
T cd06649 158 -----MANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGE 222 (331)
T ss_pred -----ccccCCCCcCcCCHhHhc----------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccc
Confidence 112335788999999764 3467889999999999999999999996433222211000
Q ss_pred ----------------------------------------CCCCC-CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 ----------------------------------------DPSQH-LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ----------------------------------------~~~~~-~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+. .....++++++||.+||+.||++|||++++++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 223 EGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 111345789999999999999999999999998
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=346.04 Aligned_cols=254 Identities=18% Similarity=0.211 Sum_probs=197.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||+||+|++.. +.||||++.+... ......+.+.+|+++++.++||||++++++++++...|+|
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 68999999999999999998853 6799999865411 1233445678899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 99998 699999988788999999999999999999999999999999999999999999999999998632111000
Q ss_pred --------CCC----c--------------------------ceeeecCCCCccccCcchhcccCCccccccCCCCCCcc
Q 000410 181 --------PSD----F--------------------------SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222 (1553)
Q Consensus 181 --------~~~----~--------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~ 222 (1553)
... . ........||+.|+|||++. +..++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~ 229 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL----------QQGYGQEC 229 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc----------cCCCCCce
Confidence 000 0 00001245889999999764 34578899
Q ss_pred cHHHHHHHHHHHHcCCCCCCchHHHHHHhcC--CCCCCCCCC--CCCHHHHHHHHHhcccCcCCC---CCHHHHHHh
Q 000410 223 DIFAVGCVIAELFLEVPFFELSHLLAYRRGQ--YDPSQHLEK--IPDSGIRKMILHMIQLEPELR---FSAESYLQN 292 (1553)
Q Consensus 223 DIwSlG~il~eLltg~~pf~~~~~~~~~~~~--~~~~~~~~~--~~~~~l~~LI~~mL~~dP~~R---psa~elL~~ 292 (1553)
|||||||++|||++|.+||............ ......++. ..+.++++||.+||. +|.+| +++.|+++|
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 230 DWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred eeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999999999999999999654332211111 111111222 346789999999998 77775 599999998
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=348.83 Aligned_cols=254 Identities=17% Similarity=0.190 Sum_probs=198.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++.+.. .........+.+|+++++.++||||+++++.+++++..|+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~--~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD--VLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH--HHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence 68999999999999999999864 679999986541 11122345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......+.
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 99998 699999988888999999999999999999999999999999999999999999999999987532100000
Q ss_pred --------------CC--------------------CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHH
Q 000410 181 --------------PS--------------------DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 226 (1553)
Q Consensus 181 --------------~~--------------------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 226 (1553)
.. ..........||+.|+|||++. +..++.++||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwS 229 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL----------RTGYTQLCDWWS 229 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc----------CCCCCcceeeee
Confidence 00 0000011346899999999774 345788999999
Q ss_pred HHHHHHHHHcCCCCCCchHHHHH----HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHHHh
Q 000410 227 VGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 227 lG~il~eLltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
|||++|||++|++||........ ...............++.+.++|.+|+ .+|.+|+ +++++++|
T Consensus 230 lGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 230 VGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999999999975543322 111111111112234678999999987 5999999 99999998
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=346.21 Aligned_cols=254 Identities=19% Similarity=0.216 Sum_probs=198.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|++.+.||+|+||.||+|++.. ..||+|++.+.. .........+.+|+++++.++||||+++++.+.++...|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~--~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD--VLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 79 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH--hhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEE
Confidence 58899999999999999999854 569999987541 12234456788899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.........
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99998 699999988778999999999999999999999999999999999999999999999999987532110000
Q ss_pred ----------CCC----------------------------cceeeecCCCCccccCcchhcccCCccccccCCCCCCcc
Q 000410 181 ----------PSD----------------------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222 (1553)
Q Consensus 181 ----------~~~----------------------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~ 222 (1553)
..+ ......+..||+.|+|||++. +..++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----------~~~~~~~~ 229 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL----------RTGYTQLC 229 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc----------CCCCCCee
Confidence 000 000012345889999999774 34578899
Q ss_pred cHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHHHh
Q 000410 223 DIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS---AESYLQN 292 (1553)
Q Consensus 223 DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 292 (1553)
|||||||++|||++|.+||....... +...............++.+.++|.+|+ .||.+|++ ++++++|
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 230 DWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred eEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 99999999999999999997543322 2221111111112234678999999987 59999997 9999988
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=338.26 Aligned_cols=243 Identities=16% Similarity=0.213 Sum_probs=191.8
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.+ +.||+|++.+.... .+........|..+++. ++||||+++++++.+++..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 469999999999999864 56999999764110 11122334445556664 58999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------- 151 (316)
T cd05619 79 NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA------- 151 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-------
Confidence 8 69999998877799999999999999999999999999999999999999999999999999875322111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++||||+||++|||++|.+||.........+........++...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (316)
T cd05619 152 KTCTFCGTPDYIAPEILL----------GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTR 221 (316)
T ss_pred ceeeecCCccccCHHHHc----------CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCH
Confidence 112345788999999774 3467889999999999999999999997554433322211112234445678
Q ss_pred HHHHHHHHhcccCcCCCCCHH-HHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSAE-SYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa~-elL~~ 292 (1553)
.++++|.+||+.||++||++. ++++|
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 899999999999999999996 77776
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=338.81 Aligned_cols=243 Identities=19% Similarity=0.235 Sum_probs=192.1
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.. ..||+|++.+... ........+..|..++..+ +||||+++++++.+++..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELV--NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHh--cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCC
Confidence 469999999999999864 5699999976521 1123344566676777665 7999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+...
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~------ 152 (329)
T cd05618 79 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------ 152 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc------
Confidence 9 699999988778999999999999999999999999999999999999999999999999998743221111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch---------HHHHHHhcCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---------HLLAYRRGQYDPS 257 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~---------~~~~~~~~~~~~~ 257 (1553)
.....|++.|+|||.+. +..++.++|||||||++|||++|.+||... ......+......
T Consensus 153 -~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (329)
T cd05618 153 -TSTFCGTPNYIAPEILR----------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 221 (329)
T ss_pred -cccccCCccccCHHHHc----------CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC
Confidence 12345789999999774 346788999999999999999999998421 0111111111122
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 292 (1553)
..++...+..+.++|.+||+.||++||+ ++++++|
T Consensus 222 ~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 222 IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 2345556778999999999999999998 4788887
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=342.49 Aligned_cols=244 Identities=20% Similarity=0.277 Sum_probs=192.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+. ++.||+|++.+.. ........+.+|..+++.++||||+++++++...
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred ceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc---cChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 7999999999999999999875 3669999986542 1223345566788899999999999999988543
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+||||++++|.+.+.. .+++.++..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~ 172 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_pred ceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence 35799999999999888864 3889999999999999999999999999999999999999999999999998754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH--------
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-------- 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-------- 249 (1553)
.......+++.|+|||++. +..++.++|||||||++|+|++|+.||........
T Consensus 173 --------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (355)
T cd07874 173 --------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234 (355)
T ss_pred --------cccCCccccCCccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 1123345788999999774 34578899999999999999999999965432110
Q ss_pred ------------------Hhc--CC--------------CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 ------------------RRG--QY--------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ------------------~~~--~~--------------~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... .+ ..........+..+++||.+||+.||++|||+.|+|+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred CCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000 00 00011112234578999999999999999999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=342.60 Aligned_cols=252 Identities=19% Similarity=0.204 Sum_probs=199.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.. +.+|+|++.+... ........+.+|+.+++.++||||++++++++++...|+|
T Consensus 44 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 79999999999999999999864 5699999975311 1122344577888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++... .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 122 ~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~---- 196 (370)
T cd05621 122 MEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG---- 196 (370)
T ss_pred EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC----
Confidence 99998 6999999765 48999999999999999999999999999999999999999999999999987542111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.....+..||+.|+|||++.... ....++.++||||+||++|||++|.+||....... +.........
T Consensus 197 --~~~~~~~~gt~~Y~aPE~~~~~~------~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (370)
T cd05621 197 --MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNF 268 (370)
T ss_pred --ceecccCCCCcccCCHHHHhccC------CCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCC
Confidence 11223556899999999886332 12347889999999999999999999997654322 2222111111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
......+..++++|.+||..+|.+ |++++|+++|
T Consensus 269 p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 269 PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 111234678999999999865544 8899999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=337.40 Aligned_cols=243 Identities=19% Similarity=0.233 Sum_probs=195.6
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.. ..||+|++.+... ........+..|.++++.+ +||||+++++++++.+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI--LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 469999999999999864 5799999976421 1112233455666777776 6999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------- 151 (318)
T cd05570 79 NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV------- 151 (318)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-------
Confidence 8 69999998887899999999999999999999999999999999999999999999999998864321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||.+. +..++.++|||||||++|+|++|.+||...................+...++
T Consensus 152 ~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (318)
T cd05570 152 TTSTFCGTPDYIAPEILS----------YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSK 221 (318)
T ss_pred cccceecCccccCHHHhc----------CCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCH
Confidence 112235788999999774 3467889999999999999999999997655444333222222234455678
Q ss_pred HHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
.+++||.+||+.||++||++ .++++|
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 99999999999999999999 999987
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=340.80 Aligned_cols=242 Identities=20% Similarity=0.227 Sum_probs=195.3
Q ss_pred EEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||++++. +..||+|++.+... .......+..|+++++.++||||+++++++.++...|+|||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 78 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL---KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILD 78 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh---hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEc
Confidence 67999999999999762 35699999976421 11223456678889999999999999999999999999999
Q ss_pred ccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCc
Q 000410 106 YFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
|++ |+|.+++..+..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~----- 153 (318)
T cd05582 79 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK----- 153 (318)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-----
Confidence 998 69999998887899999999999999999999999999999999999999999999999999875422111
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIP 264 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 264 (1553)
......|++.|+|||.+. ...++.++|||||||++|||++|+.||..................++...
T Consensus 154 --~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~ 221 (318)
T cd05582 154 --KAYSFCGTVEYMAPEVVN----------RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFL 221 (318)
T ss_pred --ceecccCChhhcCHHHHc----------CCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 112345788999999764 33567899999999999999999999976544333222222222344556
Q ss_pred CHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 265 DSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
++.+++||.+||+.||++||+ ++++++|
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 788999999999999999999 5667766
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=354.02 Aligned_cols=246 Identities=18% Similarity=0.199 Sum_probs=198.8
Q ss_pred ccceEEEEEeeccCcEEEEEEEECC---ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE---GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~~---~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
...|.+.+.||+|+||.||+|.... ..||+|.+... .......+.+|+.+++.++||||++++++++.++..
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~-----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~ 140 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN-----DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKL 140 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC-----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEE
Confidence 3359999999999999999998753 45888876432 123345677888999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 101 YLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
||||||++ |+|.+++. .+..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 99999998 69988764 34568999999999999999999999999999999999999999999999999987642
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----Hh
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RR 251 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~ 251 (1553)
.... .....+..||+.|+|||++. +..++.++|||||||++|||++|.+||........ ..
T Consensus 221 ~~~~-----~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~ 285 (478)
T PTZ00267 221 DSVS-----LDVASSFCGTPYYLAPELWE----------RKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY 285 (478)
T ss_pred Cccc-----cccccccCCCccccCHhHhC----------CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 2110 11123446899999999764 34678999999999999999999999975543332 22
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+. ..+...+..++++|.+||..||++||++++++++
T Consensus 286 ~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 286 GKYD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CCCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 3322 2333456789999999999999999999999987
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-34 Score=339.55 Aligned_cols=243 Identities=20% Similarity=0.266 Sum_probs=191.9
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHH-HHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHI-RETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e-~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||.||+|++.. ..||+|++.+... ........+..| ..+++.++||||+++++++.+.+..|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTI--LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCC
Confidence 479999999999999854 5699999976421 111222333333 34678899999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....+..
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~------- 151 (321)
T cd05603 79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE------- 151 (321)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC-------
Confidence 9 59999998777899999999999999999999999999999999999999999999999998874322111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||.+. +..++.++|||||||++|||++|.+||...+..............++...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLR----------KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTV 221 (321)
T ss_pred ccccccCCcccCCHHHhc----------CCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCH
Confidence 112345789999999764 3457889999999999999999999997665444333322222334445567
Q ss_pred HHHHHHHHhcccCcCCCCCHH----HHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSAE----SYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa~----elL~~ 292 (1553)
.+.++|.+||+.||.+||++. ++++|
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 899999999999999999764 56555
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=340.53 Aligned_cols=247 Identities=21% Similarity=0.215 Sum_probs=196.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+..+.||+|+||.||+|++. +..||||++.... .......+.+|+++++.++||||++++++++.++..|+|
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH----EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC----cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 6888999999999999999986 4679999986542 234556788999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. |+|.+. ..+.+..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--- 223 (353)
T PLN00034 151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--- 223 (353)
T ss_pred EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc---
Confidence 99999 477543 2356788889999999999999999999999999999999999999999999875422111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHHH-HhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLAY-RRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~~-~~~~~~~~~ 258 (1553)
......|+..|+|||.+.... ..+...+.++|||||||++|||++|+.||.... .... .........
T Consensus 224 ----~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 294 (353)
T PLN00034 224 ----PCNSSVGTIAYMSPERINTDL-----NHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPP 294 (353)
T ss_pred ----cccccccCccccCcccccccc-----ccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCC
Confidence 112345789999999874321 123345678999999999999999999996322 1111 111122222
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+.++++||.+||+.||++||++.|+++|
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3344556789999999999999999999999998
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=329.40 Aligned_cols=245 Identities=14% Similarity=0.018 Sum_probs=199.2
Q ss_pred EEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe----CCEEEEEecc
Q 000410 31 EVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----DKAAYLLRQY 106 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~----~~~~~lV~E~ 106 (1553)
..||+|+++.||+|+..++.||||++.+.. .......+.+.+|+.+|++++||||+++++++.+ ....++||||
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFH--KGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccc--cccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 679999999999999998999999986542 2234445678899999999999999999999876 3578999999
Q ss_pred cc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCc
Q 000410 107 FF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 107 ~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
+. |+|.+++..+..+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++....+.
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~------ 177 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP------ 177 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc------
Confidence 99 6999999888889999999999999999999998 599999999999999999999999999987542211
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC--CCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ--YDPSQHLEK 262 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~--~~~~~~~~~ 262 (1553)
....+++.|+|||.+.+. ...++.++|||||||++|||++|..||............ ......++.
T Consensus 178 ----~~~~~~~~y~aPE~~~~~--------~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 245 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDI--------FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPL 245 (283)
T ss_pred ----ccccCcccccCHHHhhhc--------cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Confidence 123467889999977421 246889999999999999999999999765433322111 111222343
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..++.++++|.+||+.||++|||++|+++.+..
T Consensus 246 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~ 278 (283)
T PHA02988 246 DCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL 278 (283)
T ss_pred cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence 456789999999999999999999999998653
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=338.58 Aligned_cols=254 Identities=18% Similarity=0.170 Sum_probs=202.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||+|++.. +.||+|++.+.. .......+.+.+|+.+++.++||||++++++++++...|+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSV--LLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHH--hhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 68999999999999999999863 679999997642 11233456678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--- 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK--- 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC---
Confidence 99998 6999999775 569999999999999999999999999999999999999999999999999987542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~ 257 (1553)
........|++.|+|||++..... .....++.++|||||||++|||++|..||....... +........
T Consensus 157 ---~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~ 229 (330)
T cd05601 157 ---MVNSKLPVGTPDYIAPEVLTTMNG----DGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK 229 (330)
T ss_pred ---ceeeecccCCccccCHHHhccccc----cccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC
Confidence 112233467899999998853221 124567899999999999999999999997543322 221111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.......++.+++||.+||. ||.+||+++++++|
T Consensus 230 ~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 230 FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 11112346789999999998 99999999999988
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=340.46 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=189.0
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||.||+|++.. +.||+|++.+.... ........+.++..+++.++||||++++++++.++..|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH-hhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 479999999999999864 56999999764111 111122223333345778899999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-------~ 152 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-------T 152 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-------C
Confidence 59999998877899999999999999999999999999999999999999999999999999875321111 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||++. +..++.++|||||||++|||++|.+||.......................+..
T Consensus 153 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 222 (325)
T cd05602 153 TSTFCGTPEYLAPEVLH----------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNS 222 (325)
T ss_pred cccccCCccccCHHHHc----------CCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHH
Confidence 22345789999999774 34678899999999999999999999976544333222222122233344678
Q ss_pred HHHHHHHhcccCcCCCCCHHHHH
Q 000410 268 IRKMILHMIQLEPELRFSAESYL 290 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rpsa~elL 290 (1553)
+.++|.+||+.||.+|+++.+.+
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCH
Confidence 99999999999999999887433
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=340.43 Aligned_cols=244 Identities=21% Similarity=0.295 Sum_probs=192.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||.||+|.+.. ..||+|++.+.. ........+.+|..+++.++||||+++++++...+
T Consensus 22 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 22 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF---QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred ceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc---cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 79999999999999999998853 679999986542 12233455667889999999999999999886543
Q ss_pred -EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 99 -AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 99 -~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
..|+||||++++|.+.+.. .+++.++..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 99 ~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 99 QDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 176 (359)
T ss_pred ceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence 5799999999999888754 3789999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH---------
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--------- 248 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~--------- 248 (1553)
.......+++.|+|||.+. +..++.++|||||||++|+|++|.+||...+...
T Consensus 177 --------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 238 (359)
T cd07876 177 --------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 238 (359)
T ss_pred --------ccCCCCcccCCCCCchhcc----------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 1112345688899999764 3467889999999999999999999996432110
Q ss_pred -----------------HHhc--CCC--------------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -----------------YRRG--QYD--------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -----------------~~~~--~~~--------------~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+... .+. .........++.+++||.+||+.||++|||+.|+|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 239 GTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred CCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 000 0001112335678999999999999999999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=334.60 Aligned_cols=243 Identities=19% Similarity=0.187 Sum_probs=196.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc-eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~-~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
.+++++.||+|-||.|+.|++++. .||+|.+... ... .+.+.+|+.+|++|+|+|||++++++..+..+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--SMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc--ccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 466778999999999999999886 7999998653 112 234568899999999999999999999988999999
Q ss_pred cccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. |+|.++|+. +..+...+...++.||++|++||+++++|||||...||||++++.+||+|||+++.....
T Consensus 281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~---- 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD---- 356 (468)
T ss_pred EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCC----
Confidence 9999 899999987 566999999999999999999999999999999999999999999999999999943211
Q ss_pred CCcceeee-cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH---HHHHhcCCCC
Q 000410 182 SDFSFFFD-TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL---LAYRRGQYDP 256 (1553)
Q Consensus 182 ~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~---~~~~~~~~~~ 256 (1553)
.+... ...-..-|.|||.|. ...++.|+||||||++|+||+| |+.||..-.. .......+..
T Consensus 357 ---~Y~~~~~~kfPIkWtAPEa~~----------~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl 423 (468)
T KOG0197|consen 357 ---EYTASEGGKFPIKWTAPEALN----------YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL 423 (468)
T ss_pred ---ceeecCCCCCCceecCHHHHh----------hCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC
Confidence 11111 111234599999775 4578999999999999999999 5888864432 2222233321
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. -|...++.+.+++..||..+|++|||++.+...+
T Consensus 424 p--~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 424 P--RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVL 458 (468)
T ss_pred C--CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHH
Confidence 1 2344567899999999999999999999777654
|
|
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=334.83 Aligned_cols=247 Identities=20% Similarity=0.307 Sum_probs=195.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++....... ....+.+|+.+++.++||||+++++++..++..|+|
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG----APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC----cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 79999999999999999998853 669999986542211 123355678899999999999999999999999999
Q ss_pred eccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+..
T Consensus 83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 159 (309)
T cd07872 83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK--- 159 (309)
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc---
Confidence 999999999988654 4589999999999999999999999999999999999999999999999999875422211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhc------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRG------ 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~------ 252 (1553)
......+++.|+|||.+.+ ...++.++||||+||++|+|++|.+||....... +.+.
T Consensus 160 ----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 226 (309)
T cd07872 160 ----TYSNEVVTLWYRPPDVLLG---------SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTE 226 (309)
T ss_pred ----ccccccccccccCCHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 1123346788999997742 2357889999999999999999999996543211 1100
Q ss_pred ---------------CCC---CCC--CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ---------------QYD---PSQ--HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ---------------~~~---~~~--~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+. +.. ......++++++||.+||+.||.+|||++|+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 227 ETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred HHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000 000 0111235688999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=338.51 Aligned_cols=243 Identities=20% Similarity=0.268 Sum_probs=190.5
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHH-HHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIR-ETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~-~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++. +..||+|++.+.... . ......+..|. .+++.++||||++++++++.++..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~-~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-N-RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-h-hhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCC
Confidence 46999999999999985 357999999764211 1 12223333333 4577899999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |+|.+++.....+++.++..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~------- 151 (325)
T cd05604 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD------- 151 (325)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-------
Confidence 9 59999998888899999999999999999999999999999999999999999999999999874321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||.+. +..++.++|||||||++|||++|.+||...+...................+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIR----------KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASL 221 (325)
T ss_pred CcccccCChhhCCHHHHc----------CCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCH
Confidence 112345789999999774 3457889999999999999999999997655443322222212222333567
Q ss_pred HHHHHHHHhcccCcCCCCCHH----HHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSAE----SYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa~----elL~~ 292 (1553)
.+.++|.+||+.||.+||++. ++++|
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 899999999999999999875 66665
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=340.01 Aligned_cols=244 Identities=19% Similarity=0.257 Sum_probs=192.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+.. ..||||++.+.. ........+.+|..+++.++||||+++++++...
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred ceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc---cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 79999999999999999999853 669999986542 1123345566788899999999999999887543
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+||||++++|.+.+.. .+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 179 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179 (364)
T ss_pred CeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence 35799999999999998864 3789999999999999999999999999999999999999999999999998754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh--
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR-- 251 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~-- 251 (1553)
.......+++.|+|||.+. +..++.++|||||||++|+|++|.+||...+... +..
T Consensus 180 --------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 241 (364)
T cd07875 180 --------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241 (364)
T ss_pred --------CcccCCcccCCcCCHHHHh----------CCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 1123345788999999774 3457889999999999999999999996432211 000
Q ss_pred --------------------c--CCC--------------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 --------------------G--QYD--------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 --------------------~--~~~--------------~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. .+. .........+..+++||.+||+.||.+|||++|+|+|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 000 0001112234578999999999999999999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=333.57 Aligned_cols=248 Identities=17% Similarity=0.179 Sum_probs=195.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
+|.+.+.||+|+||.||+|++.. ..||+|++.+.... .....+.+..|..+++.+. ||+|+++++++++++..|+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI--QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYF 78 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEE
Confidence 36788999999999999999863 57999999764111 1122334556667777765 5778889999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ |+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~-- 156 (323)
T cd05615 79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV-- 156 (323)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc--
Confidence 999998 69999998877899999999999999999999999999999999999999999999999999875321111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|.+||...................+
T Consensus 157 -----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p 221 (323)
T cd05615 157 -----TTRTFCGTPDYIAPEIIA----------YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP 221 (323)
T ss_pred -----cccCccCCccccCHHHHc----------CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 112345789999999764 34578899999999999999999999976544333222222222344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
...+..+++++.+||+.||.+|+++ +++++|
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 4556789999999999999999974 566655
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=329.71 Aligned_cols=252 Identities=17% Similarity=0.155 Sum_probs=206.4
Q ss_pred EEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 28 VLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 28 ~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
.-++-||+|+.|-||+++..++.||||.+..- -+.+++-|+.|+||||+.|.++|...-.+|||||||
T Consensus 127 sELeWlGSGaQGAVF~Grl~netVAVKKV~el------------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLHNETVAVKKVREL------------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhhhccCcccceeeeeccCceehhHHHhhh------------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 34567999999999999999999999987311 123446788999999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |-|+..|+.+..++......|..+|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++... +.+.
T Consensus 195 a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~-------~~ST 267 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS-------DKST 267 (904)
T ss_pred ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh-------hhhh
Confidence 9 8999999999899999999999999999999999999999999999999999999999999887542 1111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC--CCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD--PSQHLEKIP 264 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~--~~~~~~~~~ 264 (1553)
.-..+||..|||||++. ..+.++|+||||||||||||+||.-||..-+..++.-+.-. .....+...
T Consensus 268 -kMSFaGTVaWMAPEvIr----------nePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstc 336 (904)
T KOG4721|consen 268 -KMSFAGTVAWMAPEVIR----------NEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTC 336 (904)
T ss_pred -hhhhhhhHhhhCHHHhh----------cCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccC
Confidence 12346899999999765 56889999999999999999999999975554444433332 222345566
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCchhhhhh
Q 000410 265 DSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFY 310 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~fl~~~~ 310 (1553)
++.++-||++||+..|..||++.++|.||. +.-|+.|..--..|+
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~Hld-Ia~pell~~tee~yf 381 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLD-IASPELLSTTEETYF 381 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHh-hcCHHHhcccHHHHH
Confidence 779999999999999999999999999963 455565554333344
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=329.40 Aligned_cols=250 Identities=17% Similarity=0.173 Sum_probs=193.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHV 87 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnI 87 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|++.... .......+.+|+.+++.++||||
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA----NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCe
Confidence 78999999999999999997532 259999886431 23445668888999999999999
Q ss_pred eEEEEEEEeCCEEEEEecccc-CCHHHHhcCC-------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 000410 88 WAFQFWQETDKAAYLLRQYFF-NSLRDRLSTP-------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICH 147 (1553)
Q Consensus 88 v~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~-------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH 147 (1553)
+++++++.+....|+||||+. |+|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999998 6999988543 23677889999999999999999999999
Q ss_pred cCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHH
Q 000410 148 GDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 227 (1553)
Q Consensus 148 rDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 227 (1553)
|||||+|||++.++.+||+|||+++..... +.........++..|+|||.+. ...++.++|||||
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~sl 226 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAG-----DYYRIQGRAVLPIRWMAWECIL----------MGKFTTASDVWAF 226 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccC-----ceeEecCcCCCCccccCHHHHh----------cCCCCchhhhHHH
Confidence 999999999999999999999998754221 1111222334567899999764 3457889999999
Q ss_pred HHHHHHHHcC--CCCCCchHHHHH--------HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 228 GCVIAELFLE--VPFFELSHLLAY--------RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 228 G~il~eLltg--~~pf~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
||++|||+++ ..||........ ...........+...+..+.+||.+||+.||++|||++++.+.++
T Consensus 227 G~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 227 GVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 9999999874 667753222111 111111111122334578999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=327.88 Aligned_cols=246 Identities=23% Similarity=0.240 Sum_probs=186.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHH---hcCCCCCeeEEEEEEEe----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETF---RSIDHPHVWAFQFWQET---- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l---~~l~hpnIv~~~~~~~~---- 96 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++......... .....+|..++ +.++||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL---PLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC---chHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC
Confidence 48899999999999999999864 56999998654211111 11122333444 44579999999998764
Q ss_pred -CCEEEEEeccccCCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccc
Q 000410 97 -DKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173 (1553)
Q Consensus 97 -~~~~~lV~E~~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~ 173 (1553)
....+++|||+.++|.+++... +.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 78 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 78 RETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred CCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 3458999999999999988653 3489999999999999999999999999999999999999999999999998875
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HH
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AY 249 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~ 249 (1553)
..... ......+++.|+|||.+. +..++.++||||+||++|+|++|.+||...... ++
T Consensus 158 ~~~~~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~ 219 (288)
T cd07863 158 YSCQM--------ALTPVVVTLWYRAPEVLL----------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 219 (288)
T ss_pred ccCcc--------cCCCccccccccCchHhh----------CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHH
Confidence 42111 112234688899999774 345788999999999999999999999643221 11
Q ss_pred HhcC------------------CCCC-----CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 RRGQ------------------YDPS-----QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ~~~~------------------~~~~-----~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... +... .......++.++++|.+||+.||++|||+.|+++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 220 FDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred HHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1100 0000 00111235678999999999999999999999988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=334.41 Aligned_cols=243 Identities=18% Similarity=0.230 Sum_probs=193.0
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.. ..||+|++.+.. .......+.+.+|..++..+ +||||+++++++++.+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKEL--VHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--hhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 479999999999999864 569999997642 11223345567777888777 6999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------- 151 (327)
T cd05617 79 NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD------- 151 (327)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-------
Confidence 8 69999998777799999999999999999999999999999999999999999999999998874322111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-------HHHHHHhcCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-------HLLAYRRGQYDPSQH 259 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-------~~~~~~~~~~~~~~~ 259 (1553)
...+..|++.|+|||.+. +..++.++|||||||++|||++|.+||... ......+........
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (327)
T cd05617 152 TTSTFCGTPNYIAPEILR----------GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR 221 (327)
T ss_pred ceecccCCcccCCHHHHC----------CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC
Confidence 123456789999999764 346788999999999999999999999521 111111111111223
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCH------HHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSA------ESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa------~elL~~ 292 (1553)
++...+..+.++|.+||+.||++|+++ +++++|
T Consensus 222 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 222 IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 455567889999999999999999984 688877
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=349.52 Aligned_cols=241 Identities=20% Similarity=0.245 Sum_probs=187.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+.. ..||||++.... ....+|+.+++.++||||+++++++...
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 79999999999999999999853 679999885431 1123577899999999999998876432
Q ss_pred --CEEEEEeccccCCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCc
Q 000410 98 --KAAYLLRQYFFNSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFAS 170 (1553)
Q Consensus 98 --~~~~lV~E~~~gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~ 170 (1553)
..+++||||++++|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 138 ~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred CceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 2577999999999888764 345699999999999999999999999999999999999999665 699999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL---- 246 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~---- 246 (1553)
++....... .....|++.|+|||++.+ ...++.++|||||||++|||++|.+||.....
T Consensus 218 a~~~~~~~~--------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~ 280 (440)
T PTZ00036 218 AKNLLAGQR--------SVSYICSRFYRAPELMLG---------ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL 280 (440)
T ss_pred chhccCCCC--------cccCCCCcCccCHHHhcC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 975422111 112356888999998742 23578899999999999999999999975421
Q ss_pred HHHHhcC--------------C-----CC------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 247 LAYRRGQ--------------Y-----DP------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 247 ~~~~~~~--------------~-----~~------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.+.. + .. ...++...++++++||.+||+.||.+|||+.|+|+|
T Consensus 281 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 281 VRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 1111100 0 00 001222345789999999999999999999999998
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=343.85 Aligned_cols=249 Identities=22% Similarity=0.250 Sum_probs=197.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||.||++.+. +..||+|++.+.. ......+++.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 77 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF---QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFE 77 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc---cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccc
Confidence 4678899999999999999975 4679999985431 11223456778889999999999999999998776
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|+||||+.++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 78 EIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred eEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 78999999999999999888889999999999999999999999999999999999999999999999999987542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HH----
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YR---- 250 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~---- 250 (1553)
........+++.|+|||.+.+ ...++.++||||+||++|||++|++||....... +.
T Consensus 158 ------~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g 222 (372)
T cd07853 158 ------SKHMTQEVVTQYYRAPEILMG---------SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLG 222 (372)
T ss_pred ------cccCCCCCcCCCcCCHHHHcC---------CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcC
Confidence 111223346788999998742 2346889999999999999999999996432111 00
Q ss_pred -------------------hcCCCCCC-----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 -------------------RGQYDPSQ-----HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 -------------------~~~~~~~~-----~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+.. .+....++.+.+||.+||+.||++|||++|+|+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 223 TPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00011100 1222336789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=337.84 Aligned_cols=252 Identities=18% Similarity=0.214 Sum_probs=198.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. ..+|+|++.+... ......+.+.+|+.+++.++||||+++++.+.++...|+|
T Consensus 44 ~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 44 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 89999999999999999999964 5699999865311 1122344577888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++.... +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 122 ~Ey~~gg~L~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~---- 196 (371)
T cd05622 122 MEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG---- 196 (371)
T ss_pred EcCCCCCcHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC----
Confidence 99998 69999987654 8999999999999999999999999999999999999999999999999987542111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.....+..||+.|+|||++.... ....++.++|||||||++|||++|.+||....... +.........
T Consensus 197 --~~~~~~~~gt~~y~aPE~l~~~~------~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (371)
T cd05622 197 --MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF 268 (371)
T ss_pred --cccccCcccCccccCHHHHhccC------CCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccC
Confidence 11123456899999999885321 12347889999999999999999999997655432 2222111111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
......+..++++|.+||..++.+ |++++++++|
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 112234678999999999844433 7799999998
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=327.61 Aligned_cols=251 Identities=14% Similarity=0.125 Sum_probs=199.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||+|.+.+ ..|++|.+... ........+.+|+.+++.++||||+++++++....
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~----~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN----AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC----CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 78999999999999999998743 35899987543 22344566888889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
..|++|||++ ++|.+++... ..+++.++..++.||+.||.|||++|++||||||+||++++++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC
Confidence 9999999999 6999998653 4578899999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.++|+|||+++...... .........+++.|+|||.+. ...++.++|||||||++|||++ |..|
T Consensus 162 ~~~L~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDv~slG~il~el~~~g~~p 226 (283)
T cd05048 162 TVKISDFGLSRDIYSAD-----YYRVQSKSLLPVRWMPPEAIL----------YGKFTTESDIWSFGVVLWEIFSYGLQP 226 (283)
T ss_pred cEEECCCcceeeccccc-----cccccCCCcccccccCHHHhc----------cCcCchhhhHHHHHHHHHHHHcCCCCC
Confidence 99999999987553221 111122334577899999764 3457889999999999999998 8888
Q ss_pred CCchHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 241 FELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 241 f~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
|.......+.... .......+...++.+.+|+.+||+.||++||++.|++++++.
T Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 227 YYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 7643332222111 111112334456799999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=351.73 Aligned_cols=242 Identities=18% Similarity=0.215 Sum_probs=184.3
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC------CCCCeeEEEEEEEe
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI------DHPHVWAFQFWQET 96 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l------~hpnIv~~~~~~~~ 96 (1553)
.+|++.+.||+|+||+||+|.+.. +.||||++.+.. ........|+.+++.+ +|++++++++++..
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 379999999999999999998854 569999985431 1222233344444444 45668999998876
Q ss_pred C-CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCC-------------
Q 000410 97 D-KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWN------------- 161 (1553)
Q Consensus 97 ~-~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~------------- 161 (1553)
+ ..+|+|||++.++|.+++.+++.+++.+++.|+.||+.||+|||+ .||+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 203 ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 4 578999999999999999888889999999999999999999998 5999999999999998765
Q ss_pred ---cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCC
Q 000410 162 ---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 238 (1553)
Q Consensus 162 ---~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 238 (1553)
.+||+|||.+..... ......||+.|+|||++. +..++.++|||||||++|||++|+
T Consensus 283 ~~~~vkl~DfG~~~~~~~----------~~~~~~gt~~Y~APE~~~----------~~~~~~~~DiwSlGvil~elltG~ 342 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERH----------SRTAIVSTRHYRSPEVVL----------GLGWMYSTDMWSMGCIIYELYTGK 342 (467)
T ss_pred CCceEEECCCCccccCcc----------ccccccCCccccCcHHhh----------cCCCCcHHHHHHHHHHHHHHHhCC
Confidence 499999998753211 112346789999999875 346788999999999999999999
Q ss_pred CCCCchHHHH----HHh--cCC-----------------------CCC-------------CCCCCCCCHHHHHHHHHhc
Q 000410 239 PFFELSHLLA----YRR--GQY-----------------------DPS-------------QHLEKIPDSGIRKMILHMI 276 (1553)
Q Consensus 239 ~pf~~~~~~~----~~~--~~~-----------------------~~~-------------~~~~~~~~~~l~~LI~~mL 276 (1553)
+||+...... +.. +.. .+. .....+.++.+.+||.+||
T Consensus 343 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 422 (467)
T PTZ00284 343 LLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLL 422 (467)
T ss_pred CCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhC
Confidence 9996433211 100 000 000 0001122456789999999
Q ss_pred ccCcCCCCCHHHHHHh
Q 000410 277 QLEPELRFSAESYLQN 292 (1553)
Q Consensus 277 ~~dP~~Rpsa~elL~~ 292 (1553)
+.||++|||++|+|+|
T Consensus 423 ~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 423 HYDRQKRLNARQMTTH 438 (467)
T ss_pred CcChhhCCCHHHHhcC
Confidence 9999999999999998
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=341.79 Aligned_cols=243 Identities=19% Similarity=0.155 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
+|.+.+.||.|+||.||+|...+ ..|++|.+.+. ....+|+++++.++||||+++++++..+...|
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 69999999999999999997643 45888887543 12346778999999999999999999999999
Q ss_pred EEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
++||++.++|.+++...+.+++.+++.|+.||+.||.|||++||+||||||+|||++.++.++|+|||+++........+
T Consensus 163 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 163 MVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred EEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 99999999999999777789999999999999999999999999999999999999999999999999987543221111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-------HHHHHhc--
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-------LLAYRRG-- 252 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-------~~~~~~~-- 252 (1553)
......|++.|+|||++. ...++.++|||||||++|||++|..||.... +..+.+.
T Consensus 243 -----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~ 307 (392)
T PHA03207 243 -----QCYGWSGTLETNSPELLA----------LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQ 307 (392)
T ss_pred -----cccccccccCccCHhHhc----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhc
Confidence 112345789999999774 3457889999999999999999977774321 1111110
Q ss_pred ---------------------CC--CCCCCCC-----CCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 253 ---------------------QY--DPSQHLE-----KIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 253 ---------------------~~--~~~~~~~-----~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.. .+...++ ...+.+++++|.+||..||++||++.|+|.|-
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 308 VHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred cCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00 0000011 12345789999999999999999999999993
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=318.58 Aligned_cols=253 Identities=20% Similarity=0.208 Sum_probs=203.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. +..+++|++...............+.+|+++++.++||||++++++++++...|+|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 6889999999999999999875 36799999876532222333445688889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||.++.........
T Consensus 83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~- 161 (263)
T cd06625 83 MEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG- 161 (263)
T ss_pred EEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc-
Confidence 99998 5999999887789999999999999999999999999999999999999999999999999986542211110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh-cCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR-GQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~-~~~~~~~~~ 260 (1553)
.......++..|+|||.+. +..++.++||||+||++|||++|++||...+. ..+.. ........+
T Consensus 162 ---~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 228 (263)
T cd06625 162 ---TGMKSVTGTPYWMSPEVIS----------GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQL 228 (263)
T ss_pred ---ccccCCCcCccccCcceec----------cCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCC
Confidence 0112234677899999764 33478899999999999999999999864332 22222 112222335
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+...+..+.++|.+||..+|++||++.++++|
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 229 PSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 55667899999999999999999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=323.45 Aligned_cols=241 Identities=16% Similarity=0.153 Sum_probs=191.9
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|+||+||++.+. ++.||+|++.+... ......+.+..|+++++.++||||+++++++..+...|+||||++ |
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL--KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHH--hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence 699999999999885 36799999865421 112233456678889999999999999999999999999999998 6
Q ss_pred CHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcc
Q 000410 110 SLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 185 (1553)
Q Consensus 110 sL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 185 (1553)
+|.+++. ..+.+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------ 152 (280)
T cd05608 79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS------ 152 (280)
T ss_pred CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc------
Confidence 9987773 335689999999999999999999999999999999999999999999999999865422111
Q ss_pred eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCCCCCCCC
Q 000410 186 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 186 ~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~~~~~~~ 261 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|+.||.... ...............+
T Consensus 153 -~~~~~~g~~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 221 (280)
T cd05608 153 -KTKGYAGTPGFMAPELLQ----------GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYP 221 (280)
T ss_pred -cccccCCCcCccCHHHhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCc
Confidence 112345788999999764 3467889999999999999999999996432 1222222222222344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
...++.+++++.+||+.||++|| +++++++|
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 45567899999999999999999 88999988
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=338.64 Aligned_cols=254 Identities=20% Similarity=0.248 Sum_probs=198.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.+.. .........+..|+.++..++||||+++++.+++++..|+|
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKAD--MLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH--HhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 68899999999999999999864 669999997541 11233455678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC---
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD--- 179 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~--- 179 (1553)
|||++ |+|.+++..++.+++..++.++.|++.||+|||++||+||||||+|||++.+|.++|+|||+++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 99999 59999998888899999999999999999999999999999999999999999999999998864321100
Q ss_pred -------CCCCcc------------------eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHH
Q 000410 180 -------DPSDFS------------------FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234 (1553)
Q Consensus 180 -------~~~~~~------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 234 (1553)
.+.++. ....+..||+.|+|||++. +..++.++|||||||++|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~----------~~~~~~~~DiwSlGvilyel 229 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM----------QTGYNKLCDWWSLGVIMYEM 229 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc----------CCCCCCcceeccccceeeec
Confidence 000000 0011346899999999774 34678899999999999999
Q ss_pred HcCCCCCCchHHHHHHhcCC--CCCCCCC--CCCCHHHHHHHHHhcccCcCCCC---CHHHHHHh
Q 000410 235 FLEVPFFELSHLLAYRRGQY--DPSQHLE--KIPDSGIRKMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 235 ltg~~pf~~~~~~~~~~~~~--~~~~~~~--~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
++|.+||............. .....++ ...++.+++||.+|+. ||.+|+ +++++++|
T Consensus 230 ~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 230 LIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 99999997554333211111 1111111 1246789999999874 999998 47899988
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=346.59 Aligned_cols=249 Identities=21% Similarity=0.185 Sum_probs=199.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||+||+|++. +..||||++..... .......+.+|+.++..++|+||+++++.+....
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM---SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 8999999999999999999874 46799999866421 1233456778888999999999999987764322
Q ss_pred ---EEEEEecccc-CCHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 99 ---AAYLLRQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 99 ---~~~lV~E~~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
..++||||+. |+|.+++..+ ..+++.++..++.|++.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 4789999999 6999988642 4589999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR 250 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~ 250 (1553)
++........ ....+..|++.|+|||.+. +..++.++|||||||++|||++|.+||.........
T Consensus 190 s~~~~~~~~~-----~~~~~~~Gt~~Y~aPE~~~----------~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~ 254 (496)
T PTZ00283 190 SKMYAATVSD-----DVGRTFCGTPYYVAPEIWR----------RKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVM 254 (496)
T ss_pred Ceeccccccc-----cccccccCCcceeCHHHhC----------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 8754321111 1123456889999999774 346789999999999999999999999866554332
Q ss_pred hcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..... ....++...++.+.++|.+||+.||.+||++.++++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 255 HKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 22111 1122444556889999999999999999999999998
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=332.54 Aligned_cols=243 Identities=21% Similarity=0.261 Sum_probs=183.8
Q ss_pred EEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEEEE
Q 000410 30 KEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAYLL 103 (1553)
Q Consensus 30 ~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~lV 103 (1553)
.++||+|+||.||+|++.+ ..||+|++..... ...+.+|+.+++.++||||+++++++.. +...|++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEE
Confidence 4689999999999998753 5699998854321 1235678899999999999999998854 5678999
Q ss_pred eccccCCHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe----cCCcEEEeecCc
Q 000410 104 RQYFFNSLRDRLSTP---------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT----SWNWLYLSDFAS 170 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~---------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~----~~~~vkL~DFG~ 170 (1553)
|||++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 999999999887421 2489999999999999999999999999999999999994 457899999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----- 245 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----- 245 (1553)
++....+.... .......+|+.|+|||.+.+ ...++.++||||+||++|||++|.+||...+
T Consensus 159 a~~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~ 225 (317)
T cd07868 159 ARLFNSPLKPL----ADLDPVVVTFWYRAPELLLG---------ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 225 (317)
T ss_pred eeccCCCCccc----cccCCccccccccCCHHHcC---------CCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccc
Confidence 87543221111 11234467889999998752 2357889999999999999999999995321
Q ss_pred --------HHHHHhc----------------------------CCCCCC------CCCCCCCHHHHHHHHHhcccCcCCC
Q 000410 246 --------LLAYRRG----------------------------QYDPSQ------HLEKIPDSGIRKMILHMIQLEPELR 283 (1553)
Q Consensus 246 --------~~~~~~~----------------------------~~~~~~------~~~~~~~~~l~~LI~~mL~~dP~~R 283 (1553)
+..+... ...... ......+..+.+||.+||+.||.+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 305 (317)
T cd07868 226 SNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR 305 (317)
T ss_pred cccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccC
Confidence 1111000 000000 0001224568899999999999999
Q ss_pred CCHHHHHHh
Q 000410 284 FSAESYLQN 292 (1553)
Q Consensus 284 psa~elL~~ 292 (1553)
||++|+|+|
T Consensus 306 ~t~~e~l~h 314 (317)
T cd07868 306 ITSEQAMQD 314 (317)
T ss_pred CCHHHHhcC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=330.74 Aligned_cols=244 Identities=14% Similarity=0.120 Sum_probs=196.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+.. ..+|+|++.... .......+.+|+++++.++||||+++++++.+++..|+|
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 78999999999999999999964 568888875431 133456688899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+. |+|.+++...+.+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 158 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc---
Confidence 99998 59999998877899999999999999999999985 79999999999999999999999999886442111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc-------C-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG-------Q- 253 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~-------~- 253 (1553)
.....|+..|+|||.+. +..++.++|||||||++|+|++|..||........... .
T Consensus 159 ------~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (333)
T cd06650 159 ------ANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDP 222 (333)
T ss_pred ------cccCCCCccccCHHHhc----------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCc
Confidence 12235788899999764 34578899999999999999999888864332211100 0
Q ss_pred -------------------------------------CCCCCCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -------------------------------------YDPSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -------------------------------------~~~~~~~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+.. ....+.++++||.+||+.||++|||++|+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 223 AESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred cccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 0000001 11245689999999999999999999999988
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=323.66 Aligned_cols=247 Identities=17% Similarity=0.215 Sum_probs=197.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|++.+.||+|+||+||++.+. ++.||+|++.+... ........+.+|+.+++.++||||+++++.+.++...|+|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhh--hhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEE
Confidence 3788999999999999999985 46799999865311 1122334566788999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ |+|.+++... ..+++.++..++.|++.||.|||++||+||||||+||++++++.++|+|||++...... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--~ 156 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG--E 156 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC--C
Confidence 99998 6998887543 45899999999999999999999999999999999999999999999999988653211 0
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~ 256 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|.+||..... ..+.......
T Consensus 157 ------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 220 (285)
T cd05605 157 ------TIRGRVGTVGYMAPEVVK----------NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED 220 (285)
T ss_pred ------ccccccCCCCccCcHHhc----------CCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc
Confidence 112335788999999764 34578899999999999999999999975432 1222222222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
....+...+..+++||.+||..||++|| +++++++|
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 2223444567899999999999999999 89999988
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-33 Score=336.85 Aligned_cols=249 Identities=14% Similarity=0.154 Sum_probs=195.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|++.+.||+|+||.||+|.+. +..||||++..... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC----cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 7999999999999999999742 24699999854321 22345677888999999 899999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCCC---------------------------------------------------------
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP--------------------------------------------------------- 119 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~--------------------------------------------------------- 119 (1553)
...|+||||++ |+|.+++..+.
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999 69999885421
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 120 ------------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 120 ------------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-- 269 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-- 269 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc--
Confidence 367888999999999999999999999999999999999999999999999875422110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCch----HHHHHHhcCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELS----HLLAYRRGQYDP 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~----~~~~~~~~~~~~ 256 (1553)
. .......++..|+|||.+. +..++.++|||||||++|||++ |.+||... ...+........
T Consensus 270 --~-~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~ 336 (375)
T cd05104 270 --Y-VVKGNARLPVKWMAPESIF----------NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM 336 (375)
T ss_pred --c-cccCCCCCCcceeChhHhc----------CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC
Confidence 0 1112233456799999764 3467889999999999999998 78888643 222222222221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..+...+.++++||.+||+.||++||++.|+++.++.
T Consensus 337 --~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 337 --LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred --CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1234456789999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=307.72 Aligned_cols=252 Identities=21% Similarity=0.258 Sum_probs=196.4
Q ss_pred cceEEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-C
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-D 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~ 97 (1553)
+.|+..+.||+|.||+||+|...+ ..+|+|.|....+... ....-.+|+..++.++||||+.+..++.+ +
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG---iS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG---ISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC---cCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 379999999999999999996532 2589999975532211 22234566778999999999999998866 8
Q ss_pred CEEEEEeccccCCHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC----CcEEEeec
Q 000410 98 KAAYLLRQYFFNSLRDRLST-----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW----NWLYLSDF 168 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~-----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~----~~vkL~DF 168 (1553)
+.++|++||.+.+|+..|+- ...++...++.|+.||+.|+.|||++=|+||||||.||||..+ |.|||+||
T Consensus 101 ~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 101 KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 89999999999999999953 2358999999999999999999999999999999999999988 89999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---- 244 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~---- 244 (1553)
|+++....|...- +..+....|.+|+|||.+.+ ...||++.|+||+|||++||++-+|.|.+.
T Consensus 181 GlaR~~~~plkpl----~s~d~VVVTiWYRAPELLLG---------a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~ 247 (438)
T KOG0666|consen 181 GLARLFNNPLKPL----ASLDPVVVTIWYRAPELLLG---------ARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKI 247 (438)
T ss_pred cHHHHhhcccccc----ccCCceEEEEEecChHHhcc---------cccccchhhhHHHHHHHHHHHccCccccchhhhc
Confidence 9998876554332 12234456899999999864 347999999999999999999988877432
Q ss_pred ---------HHHHHHh----------------------------cCCCCCC-----CCCCCCCHHHHHHHHHhcccCcCC
Q 000410 245 ---------HLLAYRR----------------------------GQYDPSQ-----HLEKIPDSGIRKMILHMIQLEPEL 282 (1553)
Q Consensus 245 ---------~~~~~~~----------------------------~~~~~~~-----~~~~~~~~~l~~LI~~mL~~dP~~ 282 (1553)
++..+.. ..++... ...++.++...+|+.+||..||.+
T Consensus 248 ~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~k 327 (438)
T KOG0666|consen 248 KTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIK 327 (438)
T ss_pred ccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchh
Confidence 2222211 0011000 001223455889999999999999
Q ss_pred CCCHHHHHHh
Q 000410 283 RFSAESYLQN 292 (1553)
Q Consensus 283 Rpsa~elL~~ 292 (1553)
|.|++++|+|
T Consensus 328 RIta~qAleh 337 (438)
T KOG0666|consen 328 RITAEQALEH 337 (438)
T ss_pred hccHHHHhcc
Confidence 9999999998
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-33 Score=336.35 Aligned_cols=249 Identities=16% Similarity=0.152 Sum_probs=196.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.... .......+.+|+.+++.+ +||||+++++++...
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA----HTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC----CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 69999999999999999998531 369999986542 123345677888999998 899999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCC----------------------------------------------------------
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP---------------------------------------------------------- 118 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~---------------------------------------------------------- 118 (1553)
...|+||||+. |+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 99999999999 6999988432
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 119 ------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 119 ------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
..+++.++..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... . ..
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~----~-~~ 269 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS----N-YV 269 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc----c-ee
Confidence 137788899999999999999999999999999999999999999999999987542211 1 11
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH----HHHHHhcCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~~~~~~~~~~~~~~ 261 (1553)
...+..+++.|+|||.+. ...++.++|||||||++|||++ |.+||.... .......... ...+
T Consensus 270 ~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~--~~~~ 337 (374)
T cd05106 270 VKGNARLPVKWMAPESIF----------DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ--MSRP 337 (374)
T ss_pred eccCCCCccceeCHHHhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC--ccCC
Confidence 122333456799999764 3467899999999999999997 899996432 2222222222 1233
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...++++.++|.+||+.||++||+++++++.++.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 4456789999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=325.99 Aligned_cols=247 Identities=20% Similarity=0.301 Sum_probs=196.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. ++.||+|.+....... ....+.+|+.+++.++||||+++++++..++..|+|
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG----APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC----chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 7999999999999999999886 4679999986542221 123455678899999999999999999999999999
Q ss_pred eccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....+..
T Consensus 83 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--- 159 (301)
T cd07873 83 FEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--- 159 (301)
T ss_pred EeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC---
Confidence 999999999988653 4589999999999999999999999999999999999999999999999999875432211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcC-----
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQ----- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~----- 253 (1553)
......+++.|+|||.+.+ ...++.++|||||||++|||++|++||...+.... ....
T Consensus 160 ----~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 226 (301)
T cd07873 160 ----TYSNEVVTLWYRPPDILLG---------STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTE 226 (301)
T ss_pred ----cccccceeecccCcHHHhC---------CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 1122345788999997742 23567899999999999999999999975432211 1000
Q ss_pred -----------C---CCC-------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -----------Y---DPS-------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -----------~---~~~-------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+ ... .......++.+++||.+||+.||.+|||++|+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 227 ETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred hhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 000 00112345688999999999999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=330.37 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=197.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.. +.||+|++.+... ......+.+.+|..+++.++||||++++++++++...|+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 68999999999999999999864 6799999975311 1122345577888899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+. |+|.+++.. ...+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 157 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-- 157 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--
Confidence 99998 699999975 45699999999999999999999999999999999999999999999999998865422111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcC--CC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ--YD 255 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~--~~ 255 (1553)
.......|++.|+|||++.... .....++.++||||+||++|||++|..||....... +.... ..
T Consensus 158 ----~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~ 228 (331)
T cd05597 158 ----VQSNVAVGTPDYISPEILQAME-----DGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ 228 (331)
T ss_pred ----ccccceeccccccCHHHHhhcc-----ccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc
Confidence 0111235788999999885321 112457889999999999999999999997544322 11111 11
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
... .....++.++++|.+||..++++ |++++++++|
T Consensus 229 ~~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 111 11234678999999999764444 7899999998
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=335.05 Aligned_cols=242 Identities=19% Similarity=0.241 Sum_probs=188.3
Q ss_pred eeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC---CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 33 LGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI---DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l---~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
||+|+||+||+|++.. ..||+|++.+.... . .........|..++... .||||++++++++++...|+||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~-~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-A-KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-h-hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCC
Confidence 7999999999999863 67999999754111 1 11122233344555544 6999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~------- 151 (330)
T cd05586 79 SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK------- 151 (330)
T ss_pred CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-------
Confidence 8 69999998888899999999999999999999999999999999999999999999999999865321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC-CCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD-PSQHLEKIPD 265 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~-~~~~~~~~~~ 265 (1553)
......|++.|+|||.+.+ ...++.++|||||||++|+|++|..||.........+.... .........+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 222 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLD---------EKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLS 222 (330)
T ss_pred CccCccCCccccCHHHHcC---------CCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCC
Confidence 1123457899999998742 23468899999999999999999999876554433222111 1111122456
Q ss_pred HHHHHHHHHhcccCcCCCC----CHHHHHHh
Q 000410 266 SGIRKMILHMIQLEPELRF----SAESYLQN 292 (1553)
Q Consensus 266 ~~l~~LI~~mL~~dP~~Rp----sa~elL~~ 292 (1553)
+.++++|.+||+.||.+|| +++++++|
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 7899999999999999998 68888887
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=339.72 Aligned_cols=243 Identities=24% Similarity=0.258 Sum_probs=190.7
Q ss_pred ccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
..+|.+.+.||+|+||.||+|.+.+ ..||||.... ..+.+|+++|+.++||||+++++++..++..|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEE
Confidence 4479999999999999999999975 5699996421 12456788999999999999999999999999
Q ss_pred EEeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|||++.++|.+++..+ ..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 237 lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~- 315 (461)
T PHA03211 237 LVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS- 315 (461)
T ss_pred EEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc-
Confidence 99999999999998764 4599999999999999999999999999999999999999999999999999875421111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCch----------HHHHH
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELS----------HLLAY 249 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~----------~~~~~ 249 (1553)
........||+.|+|||++. +..++.++|||||||++|||++| .++|... ++..+
T Consensus 316 ----~~~~~~~~GT~~Y~APE~~~----------~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~ 381 (461)
T PHA03211 316 ----TPFHYGIAGTVDTNAPEVLA----------GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRI 381 (461)
T ss_pred ----cccccccCCCcCCcCHHHHc----------CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHH
Confidence 11112345889999999774 34578899999999999999988 4455321 11111
Q ss_pred -HhcCCCCC----------------------------CCCCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 -RRGQYDPS----------------------------QHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 -~~~~~~~~----------------------------~~~~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........ ..+.. ..+..+++||.+||+.||.+|||+.|+|+|
T Consensus 382 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 382 IRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11111100 00110 123578999999999999999999999998
|
|
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=321.27 Aligned_cols=250 Identities=14% Similarity=0.106 Sum_probs=197.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
+|++.+.||+|+||+||+|... ...+++|.+... ........+.+|.++++.++||||+++++++..+..
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI----NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC----CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 6889999999999999999852 246899988643 223344567888899999999999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTP-----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~-----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
.|++|||++ ++|.+++..+ ..+++.++..++.|++.||.|||++||+||||||+|||++.++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence 999999999 6999998532 2378889999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.+||+|||+++...... .........++..|+|||.+. +..++.++|+|||||++|||++ |.+|
T Consensus 162 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~~g~~p 226 (283)
T cd05090 162 HVKISDLGLSREIYSAD-----YYRVQPKSLLPIRWMPPEAIM----------YGKFSSDSDIWSFGVVLWEIFSFGLQP 226 (283)
T ss_pred cEEeccccccccccCCc-----ceecccCCCccceecChHHhc----------cCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence 99999999987653211 111223334466799999764 3457889999999999999998 8888
Q ss_pred CCchHHHHHHh-cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 241 FELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 241 f~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
|.......+.. .........+...++.+++++.+||+.||++||++.+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 227 YYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 86433222111 1111112234455678999999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-34 Score=305.24 Aligned_cols=235 Identities=24% Similarity=0.250 Sum_probs=191.4
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEEe----CCEEEEE
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQET----DKAAYLL 103 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIv~~~~~~~~----~~~~~lV 103 (1553)
++||-|-.|+|..|.++. +.+|+|++.-. .. -++|++.--. -.|||||.++++|++ .+++.+|
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds------~K----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiV 137 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS------PK----ARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIV 137 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC------HH----HHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEee
Confidence 689999999999998864 56999998432 22 2344443222 369999999999864 4678899
Q ss_pred ecccc-CCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC---CcEEEeecCccccccCC
Q 000410 104 RQYFF-NSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW---NWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~---~~vkL~DFG~a~~~~~~ 177 (1553)
||.++ |.|+.+|..++. +++.++..|++||..|+.|||+.+|.||||||||+|.+.. ..+||+|||+||....+
T Consensus 138 mE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~ 217 (400)
T KOG0604|consen 138 MECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP 217 (400)
T ss_pred eecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC
Confidence 99999 599999988765 9999999999999999999999999999999999999864 37999999999976322
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch--------HHHHH
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS--------HLLAY 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~--------~~~~~ 249 (1553)
....+.+-||+|.|||++. ..+|+..+|+||+|+++|-|++|.|||... -...+
T Consensus 218 --------~~L~TPc~TPyYvaPevlg----------~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI 279 (400)
T KOG0604|consen 218 --------GDLMTPCFTPYYVAPEVLG----------PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRI 279 (400)
T ss_pred --------ccccCCcccccccCHHHhC----------chhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHh
Confidence 2345677899999999763 456899999999999999999999999422 23456
Q ss_pred HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 250 RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+.+.|.....-....++..+++|+++|..+|.+|.|++++++|-
T Consensus 280 ~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 280 RTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred hccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 77888744433334467899999999999999999999999984
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=282.71 Aligned_cols=294 Identities=21% Similarity=0.314 Sum_probs=248.4
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I 1211 (1553)
..+|+||.+.|+++.|++|+++++|+|.||.+-|||.-+..|.. .....+..|..++|+|.|+.+|+|+-|...
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~h------aipl~s~WVMtCA~sPSg~~VAcGGLdN~C 121 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVH------AIPLPSSWVMTCAYSPSGNFVACGGLDNKC 121 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEccccccee------EEecCceeEEEEEECCCCCeEEecCcCcee
Confidence 47899999999999999999999999999999999998766432 233445679999999999999999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCc
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
.||++.+... .+...+.+....|..-+.++.|-.++ .|++++.|.++.+||+.+++.+..+.+ |.+
T Consensus 122 siy~ls~~d~--------~g~~~v~r~l~gHtgylScC~f~dD~----~ilT~SGD~TCalWDie~g~~~~~f~G--H~g 187 (343)
T KOG0286|consen 122 SIYPLSTRDA--------EGNVRVSRELAGHTGYLSCCRFLDDN----HILTGSGDMTCALWDIETGQQTQVFHG--HTG 187 (343)
T ss_pred EEEecccccc--------cccceeeeeecCccceeEEEEEcCCC----ceEecCCCceEEEEEcccceEEEEecC--Ccc
Confidence 9999973210 11112333345677788888898863 899999999999999999999999876 999
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000410 1292 YVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1292 ~Itsl~~sp-~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vW 1370 (1553)
.|.++.++| +++++++|+.|+..++||+|.+.++.++.. |..-|+.+.| +|.+ .-+++|+.|+..++|
T Consensus 188 DV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~g-hesDINsv~f-fP~G---------~afatGSDD~tcRly 256 (343)
T KOG0286|consen 188 DVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEG-HESDINSVRF-FPSG---------DAFATGSDDATCRLY 256 (343)
T ss_pred cEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecc-cccccceEEE-ccCC---------CeeeecCCCceeEEE
Confidence 999999999 999999999999999999999999999886 7778999998 6654 468999999999999
Q ss_pred EcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEE-Ec
Q 000410 1371 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TG 1449 (1553)
Q Consensus 1371 Dl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~ll-Tg 1449 (1553)
|++..+.+.+|.... ...+|++++|+-.|+|+ +|
T Consensus 257 DlRaD~~~a~ys~~~---------------------------------------------~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 257 DLRADQELAVYSHDS---------------------------------------------IICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred eecCCcEEeeeccCc---------------------------------------------ccCCceeEEEcccccEEEee
Confidence 999988877776111 12379999999999766 88
Q ss_pred cCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeE
Q 000410 1450 GTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILS 1529 (1553)
Q Consensus 1450 g~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ 1529 (1553)
..|.++.+||.-.++...++. +|.+.|++
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~---------------------------------------------------GHeNRvSc 320 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLA---------------------------------------------------GHENRVSC 320 (343)
T ss_pred ecCCceeEeeccccceEEEee---------------------------------------------------ccCCeeEE
Confidence 999999999987666554444 39999999
Q ss_pred EeeeecCCcEEEEEcCCceEEEcC
Q 000410 1530 LGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1530 va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+ ..+++|-.++|||.|-.+|||-
T Consensus 321 l-~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 321 L-GVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred E-EECCCCcEEEecchhHheeecC
Confidence 9 7899999999999999999993
|
|
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=321.29 Aligned_cols=248 Identities=19% Similarity=0.284 Sum_probs=195.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. +..||+|++...... +.....+.+|+.+++.++||||+++++++.++...|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE---EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLI 77 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc---CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEE
Confidence 5889999999999999999985 366999998654211 22334566788999999999999999999999999999
Q ss_pred eccccCCHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFFNSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....+..
T Consensus 78 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 156 (285)
T cd07861 78 FEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR- 156 (285)
T ss_pred EecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc-
Confidence 999999999988643 4589999999999999999999999999999999999999999999999999875432211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhc--C-
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRG--Q- 253 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~--~- 253 (1553)
......+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||....... .... .
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd07861 157 ------VYTHEVVTLWYRAPEVLLG---------SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTP 221 (285)
T ss_pred ------cccCCcccccccChHHhcC---------CCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 1122345788999997642 2346789999999999999999999996442211 0000 0
Q ss_pred -----------------CC-----CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -----------------YD-----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -----------------~~-----~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. .........+++++++|.+||+.||++|||+.++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 222 TEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred ChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 0000112246788999999999999999999999988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=327.09 Aligned_cols=255 Identities=20% Similarity=0.247 Sum_probs=206.9
Q ss_pred ccccCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE
Q 000410 17 YLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQ 94 (1553)
Q Consensus 17 ~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~ 94 (1553)
|+.+-|+. .|.-++.||.|+||-||.|++.. ..||||.+...+. ...+. ...+.+|+..|+++.|||++.|.++|
T Consensus 19 F~k~DPEk-lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGK-Qs~EK-WqDIlKEVrFL~~l~HPntieYkgCy 95 (948)
T KOG0577|consen 19 FFKDDPEK-LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEK-WQDILKEVRFLRQLRHPNTIEYKGCY 95 (948)
T ss_pred HccCCHHH-HHHHHHHhcCCccceeEEeeccCccceeeeeecccccc-ccHHH-HHHHHHHHHHHHhccCCCccccccee
Confidence 44444543 47778899999999999999854 6799999865432 23333 45677888999999999999999999
Q ss_pred EeCCEEEEEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccc
Q 000410 95 ETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173 (1553)
Q Consensus 95 ~~~~~~~lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~ 173 (1553)
..+...|||||||-|+-.|++.- +.++.+.++..|+.+.+.||.|||+++.||||||..|||+++.|.|||+|||++..
T Consensus 96 Lre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi 175 (948)
T KOG0577|consen 96 LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASI 175 (948)
T ss_pred eccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhh
Confidence 99999999999999987777742 34599999999999999999999999999999999999999999999999998865
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC-CCchHHHHHHhc
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF-FELSHLLAYRRG 252 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p-f~~~~~~~~~~~ 252 (1553)
. .| ..+..|||+|||||++.. ...+.|+-++||||||+++.||.-.+|| |+..-+..+...
T Consensus 176 ~-----~P------AnsFvGTPywMAPEVILA-------MDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI 237 (948)
T KOG0577|consen 176 M-----AP------ANSFVGTPYWMAPEVILA-------MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 237 (948)
T ss_pred c-----Cc------hhcccCCccccchhHhee-------ccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH
Confidence 4 11 235679999999999973 3467899999999999999999998555 665554443333
Q ss_pred CCCCCCCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYDPSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~~~~~~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+..+.+ ....+..+++||..||++-|.+|||++++|+|
T Consensus 238 AQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 238 AQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 23322323 33446789999999999999999999999998
|
|
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=317.52 Aligned_cols=249 Identities=15% Similarity=0.085 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.... .......+.+|..+++.++||||+++++++..+...
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC----SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC----CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 7999999999999999999764 2469999986542 123345677888999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|+||||++ |+|.+++... ..+++.++..++.||+.||+|||++|++||||||+|||++.++.++|+|||.+......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~- 160 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE- 160 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc-
Confidence 99999999 5899998764 46899999999999999999999999999999999999999999999999976542110
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhc-CCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRG-QYDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~-~~~~ 256 (1553)
.........++..|+|||.+. ...++.++||||+||++||+++ |.+||........... ....
T Consensus 161 -----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~ 225 (266)
T cd05064 161 -----AIYTTMSGKSPVLWAAPEAIQ----------YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF 225 (266)
T ss_pred -----chhcccCCCCceeecCHHHHh----------hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC
Confidence 000111223456799999764 3467889999999999999875 8888864332222111 1111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
....+...+..+.+++.+||+.+|++||+++++++.+.
T Consensus 226 ~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 226 RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 11234445678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=307.69 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=205.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+++.||+|.||+|.+|+.+. +.+|+|++.|.-.. ..++. ..-..|.++|+...||.+..+.-.|++.+.+|+|
T Consensus 169 dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevii-akdEV-AHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 169 DFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVII-AKDEV-AHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred hhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhee-ehHHh-hhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 67889999999999999998864 67999999876221 22222 2334566899999999999888889999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. |.|+-.++....+++...+.+...|+.||.|||+++||.||||.+|.|++.+|++||+|||+++.-..
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~------ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK------ 320 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc------
Confidence 99999 59999998888899999999999999999999999999999999999999999999999999985422
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
+.....+.+|||.|+|||++. ...|+.++|.|.+|+++|||++|+.||...+-.++..-+......++.
T Consensus 321 -~g~t~kTFCGTPEYLAPEVle----------DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr 389 (516)
T KOG0690|consen 321 -YGDTTKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR 389 (516)
T ss_pred -ccceeccccCChhhcCchhhc----------cccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc
Confidence 223456789999999999764 567899999999999999999999998665544433333333334666
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
..+++.+.|+..+|.+||.+|. .|.|+.+|
T Consensus 390 ~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 390 TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 6778999999999999999998 45667666
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=306.28 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=206.3
Q ss_pred EEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEEEecc
Q 000410 30 KEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 30 ~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
.+.||+|+|+.|--|..- +..||||++.|.. .....++.+|++++.+++ |+||++++++|+++..+|||||-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~-----gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP-----GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCC-----chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEec
Confidence 468999999999988763 4569999998762 234567888999999985 99999999999999999999999
Q ss_pred cc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCc---EEEeecCccccccCCCCCCC
Q 000410 107 FF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW---LYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 107 ~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~---vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+. |.|..+|.++..+++.++..+.++|+.||.+||.+||.|||+||||||..+.+. ||||||.+........+-..
T Consensus 158 m~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 158 MRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred ccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 99 699999999999999999999999999999999999999999999999987664 89999977654433322222
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch------------------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS------------------ 244 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~------------------ 244 (1553)
....-..+.+|+..|||||+..-- +.....|++++|.||||+|+|-|+.|.|||.+.
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~f-----v~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~ 312 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVF-----VDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 312 (463)
T ss_pred CCCccccCcccchhhcchhHHhhh-----ccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHH
Confidence 222334567889999999987432 233457999999999999999999999999421
Q ss_pred -HHHHHHhcCCCCCC-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 245 -HLLAYRRGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 245 -~~~~~~~~~~~~~~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
-...+..|.|..+. .|..+ +.+.+++|..+|..|+..|.++.++++|
T Consensus 313 ~LFesIQEGkYeFPdkdWahI-S~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 313 KLFESIQEGKYEFPDKDWAHI-SSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred HHHHHHhccCCcCChhhhHHh-hHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 13446778887444 44444 5689999999999999999999999997
|
|
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=321.26 Aligned_cols=254 Identities=17% Similarity=0.167 Sum_probs=199.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|.+.+.||+|+||.||+|++.+ ..+++|.+... .....+.+.+|+++++.++||||+++++++....
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc-----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 78999999999999999998532 34888887432 1233456778889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
..++||||++ ++|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999998 6999998643 2378999999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.++|+|||+++...... .........++..|+|||.+. ...++.++|||||||++|||++ |.+|
T Consensus 161 ~~~l~dfg~a~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~t~g~~p 225 (291)
T cd05094 161 LVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWSFGVILWEIFTYGKQP 225 (291)
T ss_pred cEEECCCCcccccCCCc-----eeecCCCCCcceeecChHHhc----------cCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 99999999987543221 111112334567899999764 3457889999999999999998 8888
Q ss_pred CCchHHHHHHhc-CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCC
Q 000410 241 FELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299 (1553)
Q Consensus 241 f~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP 299 (1553)
|........... ........+...+..+.+++.+||+.||++||++.++++.+.....+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 226 WFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 854333222211 11111223344567899999999999999999999999998755433
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=321.42 Aligned_cols=247 Identities=28% Similarity=0.282 Sum_probs=197.9
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||+|+||+||++++.+ +.||+|++.... ..........+|..+++.++||||+++++++......++||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~ 77 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE---IEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVM 77 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT---HHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc---ccccccchhhhhhhccccccccccccccccccccccccccc
Confidence 7899999999999999999976 369999997762 11222223345788999999999999999999999999999
Q ss_pred ccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||+.+ +|.+++...+.+++.++..++.||+.||.+||++||+||||||+||+++.++.++|+|||.+.... .
T Consensus 78 ~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-------~ 150 (260)
T PF00069_consen 78 EYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-------E 150 (260)
T ss_dssp EEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-------S
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------c
Confidence 99997 999999866779999999999999999999999999999999999999999999999999987531 1
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCCC---C
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQYD---P 256 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~~---~ 256 (1553)
.........++..|+|||.+. ....++.++|||||||++|+|++|..||... ....+.+.... .
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~---------~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T PF00069_consen 151 NNENFNPFVGTPEYMAPEVLQ---------QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS 221 (260)
T ss_dssp TTSEBSSSSSSGGGSCHHHHT---------TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH
T ss_pred ccccccccccccccccccccc---------ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence 112334456788999999763 1456789999999999999999998888754 22222211111 0
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.........+.+.++|.+||+.||++||++.++++|
T Consensus 222 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 222 SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred cccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000111112689999999999999999999999998
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=327.96 Aligned_cols=254 Identities=16% Similarity=0.197 Sum_probs=197.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.+ ..+|+|++.+.. .........+.+|..++..++||||++++++++++...|+|
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--MLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH--HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 68999999999999999999865 569999986531 11122334577788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+. |+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 99998 699999976 4568999999999999999999999999999999999999999999999999886542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-H---hcCCC-C
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-R---RGQYD-P 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-~---~~~~~-~ 256 (1553)
........|++.|+|||++.... .....++.++|||||||++|||++|++||........ . ..... .
T Consensus 157 ---~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~ 228 (332)
T cd05623 157 ---TVQSSVAVGTPDYISPEILQAME-----DGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ 228 (332)
T ss_pred ---cceecccccCccccCHHHHhccc-----cCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc
Confidence 11122346889999999875321 1234678899999999999999999999975543222 1 11111 1
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
.+......++.+++||.+||..+|.+ |++++++++|
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11112234678999999999765554 6899999998
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=332.49 Aligned_cols=248 Identities=21% Similarity=0.227 Sum_probs=193.0
Q ss_pred cCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 20 DLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 20 ~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
++++ +|++.+.||+|+||.||+|.+.. +.||||++.+.. ......+.+.+|+.+++.++||||+++++++...
T Consensus 12 ~~~~--~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07878 12 EVPE--RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF---QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA 86 (343)
T ss_pred hhhh--hhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh---hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence 3454 68899999999999999998753 569999986541 1122344566788999999999999999887543
Q ss_pred ------CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 98 ------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 98 ------~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
...|++++++.++|.+++... .+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 87 TSIENFNEVYLVTNLMGADLNNIVKCQ-KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred ccccccCcEEEEeecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccc
Confidence 457999999999999888654 4999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH---
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--- 248 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~--- 248 (1553)
+..... .....+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||...+...
T Consensus 166 ~~~~~~----------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 226 (343)
T cd07878 166 RQADDE----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLK 226 (343)
T ss_pred eecCCC----------cCCccccccccCchHhcC---------CccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 754211 122356888999998742 2357889999999999999999999996433211
Q ss_pred -HHhcCCC------------------------CCCC---CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -YRRGQYD------------------------PSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -~~~~~~~------------------------~~~~---~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+...... +... .....++.+.+||.+||+.||++|||+.|+|+|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 227 RIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1100000 0000 001234568899999999999999999999998
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-33 Score=307.79 Aligned_cols=257 Identities=18% Similarity=0.208 Sum_probs=227.6
Q ss_pred CCCCcc-cCccEeeeccccccCeeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec
Q 000410 1121 PDSGWR-PRGILVAHLQEHCSAVNEIAISHD--HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR 1197 (1553)
Q Consensus 1121 ~~~~W~-p~G~lv~~l~~H~~~V~~l~~spd--~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~ 1197 (1553)
..+.|. |++.++.+|.||.+.|.++.|+|. +.-+||||.||+||+|++++-. ....+.+|..+|..++|+|
T Consensus 198 ~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~------~l~~l~gH~~RVs~VafHP 271 (459)
T KOG0272|consen 198 LVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET------PLQDLEGHLARVSRVAFHP 271 (459)
T ss_pred ceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc------chhhhhcchhhheeeeecC
Confidence 356898 889999999999999999999997 5689999999999999998643 5667889999999999999
Q ss_pred CCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCC
Q 000410 1198 HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS 1277 (1553)
Q Consensus 1198 ~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt 1277 (1553)
+|+.|+|++.|.+-++||+.+. .......+|...|.+++|+++ |.++++|+.|..=++||+|+
T Consensus 272 sG~~L~TasfD~tWRlWD~~tk--------------~ElL~QEGHs~~v~~iaf~~D---GSL~~tGGlD~~~RvWDlRt 334 (459)
T KOG0272|consen 272 SGKFLGTASFDSTWRLWDLETK--------------SELLLQEGHSKGVFSIAFQPD---GSLAATGGLDSLGRVWDLRT 334 (459)
T ss_pred CCceeeecccccchhhcccccc--------------hhhHhhcccccccceeEecCC---CceeeccCccchhheeeccc
Confidence 9999999999999999999841 223345578889999999999 77999999999999999999
Q ss_pred CcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCE
Q 000410 1278 NSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPL 1357 (1553)
Q Consensus 1278 ~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~ 1357 (1553)
|+++..|.+ |...|.++.|+|+|..|++|+.|++++|||+|-..++..+.. |..-|..+++ .|. .|.+
T Consensus 335 gr~im~L~g--H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipA-H~nlVS~Vk~-~p~--------~g~f 402 (459)
T KOG0272|consen 335 GRCIMFLAG--HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPA-HSNLVSQVKY-SPQ--------EGYF 402 (459)
T ss_pred CcEEEEecc--cccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccc-ccchhhheEe-ccc--------CCeE
Confidence 999999977 999999999999999999999999999999999888777665 6667888888 663 3679
Q ss_pred EEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEE
Q 000410 1358 IYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRS 1437 (1553)
Q Consensus 1358 l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~s 1437 (1553)
+++++.|++++||.-.+++|.+.+.++ ...|.+
T Consensus 403 L~TasyD~t~kiWs~~~~~~~ksLaGH-----------------------------------------------e~kV~s 435 (459)
T KOG0272|consen 403 LVTASYDNTVKIWSTRTWSPLKSLAGH-----------------------------------------------EGKVIS 435 (459)
T ss_pred EEEcccCcceeeecCCCcccchhhcCC-----------------------------------------------ccceEE
Confidence 999999999999999999988777643 337899
Q ss_pred eccCCCC-eEEEccCCCeEEEEe
Q 000410 1438 LLPLPGG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1438 l~~sp~g-~llTgg~Dg~IrlWD 1459 (1553)
+..++++ .++|++.|++|++|.
T Consensus 436 ~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 436 LDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEeccCCceEEEeccCceeeecc
Confidence 9999999 788999999999995
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=319.33 Aligned_cols=245 Identities=20% Similarity=0.244 Sum_probs=202.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+.+ ..+|+|++.+.. .........+.+|+++++.++||||+++++++..++..|+|
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAK--IVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH--hhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 68999999999999999999864 679999986541 11223445678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. ++|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----- 154 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----- 154 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----
Confidence 99996 799999988888999999999999999999999999999999999999999999999999998754221
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
.....+++.|+|||.+. ....+.++||||||+++|+|++|.+||..................++.
T Consensus 155 -----~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 219 (290)
T cd05580 155 -----TYTLCGTPEYLAPEIIL----------SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS 219 (290)
T ss_pred -----CCCCCCCccccChhhhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc
Confidence 12234678899999764 235678999999999999999999999655433222211122223444
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
..+..++++|.+||..||.+|+ +++|+++|
T Consensus 220 ~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 220 FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 5578999999999999999999 89999987
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=332.74 Aligned_cols=239 Identities=18% Similarity=0.216 Sum_probs=187.2
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||+|++.+ ..||+|+..+.. ...|..+++.++||||+++++++......|+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-----------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-----------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc-----------cHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 469999999999999999999865 569999853321 1346678999999999999999999999999
Q ss_pred EeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||+.++|.+++.. ...+++.++..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... +
T Consensus 135 v~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~ 211 (357)
T PHA03209 135 VLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---P 211 (357)
T ss_pred EEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC---c
Confidence 999999999999865 356899999999999999999999999999999999999999999999999988643111 1
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCch-------------HHH
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELS-------------HLL 247 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~-------------~~~ 247 (1553)
......|++.|+|||++. +..++.++|||||||++|||+++ .++|... .+.
T Consensus 212 -----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~ 276 (357)
T PHA03209 212 -----AFLGLAGTVETNAPEVLA----------RDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLL 276 (357)
T ss_pred -----ccccccccccccCCeecC----------CCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHH
Confidence 112345788999999764 34678899999999999999986 6665421 111
Q ss_pred HHHhc-CCCCCCC----------------------------C-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 248 AYRRG-QYDPSQH----------------------------L-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 248 ~~~~~-~~~~~~~----------------------------~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+... ...+... + ....+..+.+||.+||+.||++||||+|+|+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 277 KIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 11110 0000000 0 01223467789999999999999999999998
|
|
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=320.62 Aligned_cols=247 Identities=17% Similarity=0.174 Sum_probs=197.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|.+.+.||+|+||.||+|.+.+ ..||+|++.... ..+..+.+.+|+++++.+.||||+++++++....
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA----SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC----CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 68889999999999999998642 469999986542 2334567888899999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP--------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~--------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
..|+||||++ ++|.+++... ..+++.++..++.|++.||.|||++|++||||||+||+++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999 6999998653 247889999999999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~ 242 (1553)
+|+|||+++....... ........+++.|+|||.+. ...+++++|||||||++|||++ |..||.
T Consensus 162 kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~e~~~~g~~p~~ 226 (280)
T cd05049 162 KIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred EECCcccceecccCcc-----eecCCCCcccceecChhhhc----------cCCcchhhhHHHHHHHHHHHHhcCCCCCC
Confidence 9999999875422110 01112223467899999764 3467889999999999999998 888875
Q ss_pred chHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 243 LSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 243 ~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... +..+.. ...+...+..+++++.+||+.||++||+++|+++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 227 GLSNEEVIECITQGRL---LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 433222 222222 1223345678999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=319.20 Aligned_cols=247 Identities=18% Similarity=0.192 Sum_probs=197.1
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
.+|++.+.||+|+||+||++.+.. ..+++|.+... .......+.+|+++++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 479999999999999999998521 34888887543 133455678888999999999999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCCC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP-------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~-------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
...|+||||++ ++|.+++...+ .+++.++..++.||+.||+|||++|++||||||+|||+++++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 99999999999 69999986432 48999999999999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~ 242 (1553)
+|+|||.++...... .........++..|+|||.+. ...++.++|||||||++|+|++ |.+||.
T Consensus 160 kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDiwslG~il~~l~t~g~~p~~ 224 (288)
T cd05093 160 KIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWSLGVVLWEIFTYGKQPWY 224 (288)
T ss_pred EeccCCccccccCCc-----eeecCCCCCccccccCHHHhc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999987542211 111112233467799999764 3457889999999999999998 888986
Q ss_pred chHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 243 LSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 243 ~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... +..+.. ...+...+..+.+++.+||+.||.+|||+.++++.+.
T Consensus 225 ~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 225 QLSNNEVIECITQGRV---LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred CCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 543322 222222 1233445678999999999999999999999987765
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=323.50 Aligned_cols=251 Identities=14% Similarity=0.120 Sum_probs=197.5
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--c----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--G----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
.+|++.+.||+|+||.||+|.+.. . .||+|++... ......+++.+|+.+++.++||||+++++++..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 379999999999999999998632 2 3888988533 2234456677888999999999999999998765
Q ss_pred EEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
..++++||+. |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 4678999998 7999999764 4588999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HHhc
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YRRG 252 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~~~ 252 (1553)
... .........+..|+|||.+. ...++.++|||||||++|||++ |.+||....... ....
T Consensus 162 ~~~-----~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~ 226 (316)
T cd05108 162 DEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 226 (316)
T ss_pred CCc-----ceeccCCccceeecChHHhc----------cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhC
Confidence 211 11112233456799999764 3467889999999999999997 899997544332 2222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhccc
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVV 297 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~ 297 (1553)
... ...+...+..+.+++.+||+.||++||++.+++.++....
T Consensus 227 ~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 227 GER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred CCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 211 1223445678999999999999999999999999876443
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=348.92 Aligned_cols=248 Identities=19% Similarity=0.213 Sum_probs=193.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~ 101 (1553)
+|++.+.||.|+||.||+|++.. ..+|+|++..... .......+..|+.+++.++||||++++++|.. ...+|
T Consensus 14 ~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l---~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 14 EYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL---KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc---CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 79999999999999999999865 5689999865421 23345667889999999999999999998854 46799
Q ss_pred EEecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCcEEEecC---------
Q 000410 102 LLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEK-------GICHGDIKCENVLVTSW--------- 160 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~-------gIvHrDIKp~NILv~~~--------- 160 (1553)
|||||++ |+|.++|.. ...+++..++.|+.||+.||.|||+. +|+||||||+||||+..
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999 699998864 24699999999999999999999995 49999999999999642
Q ss_pred --------CcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHH
Q 000410 161 --------NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 232 (1553)
Q Consensus 161 --------~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 232 (1553)
+.+||+|||++....... ......|++.|+|||++.. ....++.++|||||||+||
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~g--------e~~~~s~KSDVWSLG~ILY 234 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLH--------ETKSYDDKSDMWALGCIIY 234 (1021)
T ss_pred cccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhc--------cCCCCCchhHHHHHHHHHH
Confidence 348999999987542111 1123467999999998752 1335788999999999999
Q ss_pred HHHcCCCCCCchH-HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 233 ELFLEVPFFELSH-LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 233 eLltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
||++|.+||.... ...+...............+..+.+||..||..+|.+||++.|+|.+
T Consensus 235 ELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 235 ELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 9999999996432 22221111111111112345789999999999999999999999986
|
|
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-32 Score=313.00 Aligned_cols=256 Identities=17% Similarity=0.159 Sum_probs=203.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcC----HHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYID----LREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~----~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
+|.+.+.||.|+||.||+|.+.. ..+|+|.+........ .....+.+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 36788999999999999998753 6799999876532221 23344678889999999999999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.+++|||++ ++|.+++...+.+++..+..++.|++.||+|||++|++||||||+||++++++.++|+|||.++......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 999999998 5999999887779999999999999999999999999999999999999999999999999987653211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYDPS 257 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~~~ 257 (1553)
.... .........++..|+|||.+. +..++.++|+||+||++|+|++|..||.... ...+........
T Consensus 161 ~~~~-~~~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 229 (267)
T cd06628 161 LSTK-TNGARPSLQGSVFWMAPEVVK----------QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS 229 (267)
T ss_pred ccCC-ccccccccCCCcCccChhHhc----------cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC
Confidence 1110 111112234677899999764 3356788999999999999999999996533 222222111222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+..+...+..+.++|.+||+.||.+||++.++++|
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 230 PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 23444556789999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=279.99 Aligned_cols=254 Identities=21% Similarity=0.292 Sum_probs=202.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|...++||+|.||+||+|+..+ +.||+|.+...++... ......+|+-+|+.++|.||++++++...++.+-+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddeg---vpssalreicllkelkhknivrl~dvlhsdkkltlv 79 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG---VPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC---CcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEe
Confidence 46667899999999999999876 5699999876633222 122334666799999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+|||..+|..+... ++.+..+.++.++.|+++||.+||++++.|||+||.|.||+.+|.+||+|||+++...+|..
T Consensus 80 fe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr--- 156 (292)
T KOG0662|consen 80 FEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR--- 156 (292)
T ss_pred HHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE---
Confidence 99999999999865 67799999999999999999999999999999999999999999999999999998766543
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH----HHhcC-CCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA----YRRGQ-YDP 256 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~----~~~~~-~~~ 256 (1553)
.+.....|.+|++|.++.+. .-|+...|+||.|||++|+.. |+|.|.+.+... +.+.. ...
T Consensus 157 ----cysaevvtlwyrppdvlfga---------kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ 223 (292)
T KOG0662|consen 157 ----CYSAEVVTLWYRPPDVLFGA---------KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223 (292)
T ss_pred ----eeeceeeeeeccCcceeeee---------ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCc
Confidence 23344568999999998743 358889999999999999986 699998665432 21110 000
Q ss_pred CCCCCCC------------------------CCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCch
Q 000410 257 SQHLEKI------------------------PDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPF 305 (1553)
Q Consensus 257 ~~~~~~~------------------------~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~f 305 (1553)
...++.+ .+..-++|+.++|.-+|..|.+|+++++| +||.+|
T Consensus 224 ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh-------pyf~d~ 289 (292)
T KOG0662|consen 224 EDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH-------PYFSDF 289 (292)
T ss_pred cccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC-------cccccc
Confidence 1111110 12356899999999999999999999998 677654
|
|
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=311.83 Aligned_cols=243 Identities=23% Similarity=0.282 Sum_probs=197.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+. ++.+|+|.+.... .....+.+.+|..+++.++||||+++++.+++++..|++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 76 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK----SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIV 76 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc----chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEE
Confidence 4789999999999999999885 3679999986542 123345667788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ ++|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+||++++++.++|+|||.+.....+.
T Consensus 77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 154 (255)
T cd08219 77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-- 154 (255)
T ss_pred EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc--
Confidence 99998 699998864 2358899999999999999999999999999999999999999999999999886542211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~ 256 (1553)
.......+++.|+|||++. ...++.++|+||+||++|+|++|.+||...+.... ..+...
T Consensus 155 -----~~~~~~~~~~~~~aPE~~~----------~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 218 (255)
T cd08219 155 -----AYACTYVGTPYYVPPEIWE----------NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK- 218 (255)
T ss_pred -----cccccccCCccccCHHHHc----------cCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC-
Confidence 1112335678899999764 34578899999999999999999999976554332 222222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..++++|.+||+.||++||++.+++..
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 --PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 2334456789999999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=326.02 Aligned_cols=243 Identities=23% Similarity=0.293 Sum_probs=183.7
Q ss_pred EEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE--eCCEEEEE
Q 000410 30 KEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQE--TDKAAYLL 103 (1553)
Q Consensus 30 ~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~--~~~~~~lV 103 (1553)
..+||+|+||.||+|++.+ ..||+|.+.... ....+.+|..+++.++||||+++++++. .+...|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLL 78 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEE
Confidence 4689999999999999753 469999885431 1224567889999999999999999884 45678999
Q ss_pred eccccCCHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEE----ecCCcEEEeecCc
Q 000410 104 RQYFFNSLRDRLST---------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV----TSWNWLYLSDFAS 170 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~---------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv----~~~~~vkL~DFG~ 170 (1553)
|||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99999999888742 1248899999999999999999999999999999999999 4567899999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL---- 246 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~---- 246 (1553)
++....+..... ......+++.|+|||.+.+ ...++.++||||+||++|||++|.+||...+.
T Consensus 159 a~~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~ 225 (317)
T cd07867 159 ARLFNSPLKPLA----DLDPVVVTFWYRAPELLLG---------ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 225 (317)
T ss_pred eeccCCCccccc----ccCcceecccccCcHHhcC---------CCccCcHHHHHhHHHHHHHHHhCCCCcccccccccc
Confidence 976532221111 1223456888999998742 23578899999999999999999999863211
Q ss_pred ---------HHHHh----------------------------cCCCCC------CCCCCCCCHHHHHHHHHhcccCcCCC
Q 000410 247 ---------LAYRR----------------------------GQYDPS------QHLEKIPDSGIRKMILHMIQLEPELR 283 (1553)
Q Consensus 247 ---------~~~~~----------------------------~~~~~~------~~~~~~~~~~l~~LI~~mL~~dP~~R 283 (1553)
..+.. ..+... .......+..+.+||.+||+.||.+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R 305 (317)
T cd07867 226 SNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKR 305 (317)
T ss_pred cccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccc
Confidence 00000 000000 00011234568899999999999999
Q ss_pred CCHHHHHHh
Q 000410 284 FSAESYLQN 292 (1553)
Q Consensus 284 psa~elL~~ 292 (1553)
||++|+|+|
T Consensus 306 ~t~~e~l~h 314 (317)
T cd07867 306 ITSEQALQD 314 (317)
T ss_pred cCHHHHhcC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=310.89 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=199.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||+|.+. +..|++|.+..... . ......+..|.++++.++||||+++++++.+++..|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--N-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIV 77 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC--C-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEE
Confidence 4788999999999999999885 36799999865421 1 33445677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ ++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 99998 5999998663 468999999999999999999999999999999999999999999999999887553211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc-CCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG-QYDPSQH 259 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~-~~~~~~~ 259 (1553)
.......+++.|+|||.+. ...++.++|+|||||++|+|++|..||........... .....+.
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08529 156 -----NFANTIVGTPYYLSPELCE----------DKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP 220 (256)
T ss_pred -----chhhccccCccccCHHHhc----------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 1122345678899999764 33577899999999999999999999975543322211 1111222
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++...+..+.++|.+||+.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 333556789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=314.70 Aligned_cols=249 Identities=19% Similarity=0.157 Sum_probs=196.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. +..||+|++..... .....+.+|+.+++.++||||+++++++..+...|+|
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 7999999999999999999974 35699999864311 1223566788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ ++|.+++..+..+++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-- 162 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK-- 162 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccc--
Confidence 99999 599999987778999999999999999999999999999999999999999999999999998754211110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHH---HhcCCCCC-
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAY---RRGQYDPS- 257 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~---~~~~~~~~- 257 (1553)
.....+++.|+|||.+... ....++.++|+||+||++|||++|.+||.... .... ....+.+.
T Consensus 163 -----~~~~~~~~~y~~PE~~~~~-------~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T cd06646 163 -----RKSFIGTPYWMAPEVAAVE-------KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPK 230 (267)
T ss_pred -----cCccccCccccCHhHcccc-------cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCC
Confidence 1123467789999976421 13356789999999999999999988874322 2111 11111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.......+..++++|.+||..||++||+++++++|+
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 111123457899999999999999999999999884
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=326.24 Aligned_cols=253 Identities=17% Similarity=0.203 Sum_probs=197.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.. +.||+|++.+.. .........+.+|..++..++||||+++++++++++..|+|
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE--MLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH--HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 68999999999999999999864 569999986531 11122344577788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+. |+|.+++.. +..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--- 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC---
Confidence 99998 699999976 4568999999999999999999999999999999999999999999999999987542211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCC--C
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQY--D 255 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~--~ 255 (1553)
........|++.|+|||++.... .....++.++||||+||++|||++|++||........ ..... .
T Consensus 157 ---~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~ 228 (331)
T cd05624 157 ---TVQSSVAVGTPDYISPEILQAME-----DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ 228 (331)
T ss_pred ---ceeeccccCCcccCCHHHHhccc-----cCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc
Confidence 11112345889999999875321 1123578899999999999999999999975443322 11111 1
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
....+ ...++.++++|.+||..++.+ |++++++++|
T Consensus 229 ~p~~~-~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FPSHI-TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCCcc-ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11111 123578999999999876654 4689999988
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-32 Score=316.03 Aligned_cols=250 Identities=13% Similarity=0.069 Sum_probs=194.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|++.... .......+.+|..+++.++||||+++++++....
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 79999999999999999998642 459999875331 1223455778889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEee
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSD 167 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~D 167 (1553)
..++||||++ ++|.+++... ..++...+..++.|++.||.|||++|++||||||+||++++++.++|+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 9999999999 6999998642 1256788899999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL 246 (1553)
Q Consensus 168 FG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~ 246 (1553)
||+++....... ........+++.|+|||.+. ...++.++|||||||++|||++ |.+||.....
T Consensus 163 fg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~ 227 (277)
T cd05062 163 FGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLK----------DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN 227 (277)
T ss_pred CCCccccCCcce-----eecCCCCccCHhhcChhHhh----------cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 998875422110 00111223466799999764 3457889999999999999999 5888875443
Q ss_pred HHHHhc-CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 LAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 ~~~~~~-~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... ........+...+..++++|.+||+.||++||++.|++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 228 EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 332221 111112233445678999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-32 Score=315.41 Aligned_cols=240 Identities=17% Similarity=0.171 Sum_probs=185.9
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|+||.||+++.. ++.||+|++.+... ........+..|.++++.++||||++++++++++...|+||||+. +
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRL--KKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHh--hcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCC
Confidence 799999999999886 46799999865311 111223344567889999999999999999999999999999998 5
Q ss_pred CHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 110 SLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 110 sL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....... .
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--------~ 150 (277)
T cd05607 79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--------T 150 (277)
T ss_pred CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--------e
Confidence 9988885432 48899999999999999999999999999999999999999999999999886542110 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCCCC-CCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPS-QHLEK 262 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~~~-~~~~~ 262 (1553)
.....|++.|+|||.+. ...++.++||||+||++|||++|.+||.... ............ .....
T Consensus 151 ~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (277)
T cd05607 151 ITQRAGTNGYMAPEILK----------EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ 220 (277)
T ss_pred eeccCCCCCccCHHHHc----------cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccc
Confidence 12345788999999764 3347889999999999999999999986421 112222221111 11122
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++++++||.+||+.||++||++.|++++
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 346789999999999999999999766644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-32 Score=311.83 Aligned_cols=246 Identities=16% Similarity=0.138 Sum_probs=194.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc-eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~-~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||++...++ .+|+|.+.... .. ...+.+|+.+++.++||||+++++++..+...|+||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~--~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA--MS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC--cc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 688999999999999999988764 69999875331 11 245677889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||++ |+|.+++.. .+.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.++........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-- 156 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-- 156 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee--
Confidence 9998 699999865 356899999999999999999999999999999999999999999999999988654211100
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~~ 260 (1553)
......++..|+|||.+. ...++.++||||+||++|||++ |++||............. ......
T Consensus 157 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~ 222 (256)
T cd05114 157 ----SSSGAKFPVKWSPPEVFN----------FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR 222 (256)
T ss_pred ----ccCCCCCchhhCChhhcc----------cCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC
Confidence 001112345799999764 3357889999999999999999 899997544332211111 111223
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...+..+.+++.+||+.||++||+++++++.+
T Consensus 223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 444567899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=311.68 Aligned_cols=249 Identities=15% Similarity=0.124 Sum_probs=197.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||+||+|.+.. ..|++|++.... .......+.+|..+++.++||||+++++++...+..
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS----SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC----ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 78999999999999999998742 359999885432 233445677788999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|++|||++ ++|.+++... +.+++.++..++.|++.||.|||++||+||||||+|||+++++.++|+|||.++......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 99999998 5999998653 468999999999999999999999999999999999999999999999999988663111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~ 254 (1553)
. ........++..|+|||.+. ...++.++|||||||++|+|++ |..||........ ....+
T Consensus 161 ~-----~~~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~ 225 (266)
T cd05033 161 A-----TYTTKGGKIPIRWTAPEAIA----------YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY 225 (266)
T ss_pred c-----ceeccCCCCCccccChhhhc----------cCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC
Confidence 1 11111223456799999764 3457889999999999999998 8888853322221 11111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.. ..+...++.+.+++.+||+.+|++||+++++++++..
T Consensus 226 ~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 226 RL--PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred CC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11 1233456789999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-32 Score=325.40 Aligned_cols=253 Identities=19% Similarity=0.182 Sum_probs=190.5
Q ss_pred EEEEeecc--CcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 29 LKEVLGGS--RFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 29 ~~~~LG~G--~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+++.||+| +|++||++.+.. ..||+|++..... .....+.+.+|.++++.++||||+++++++..++..|+||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 78 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC---TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 78 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc---cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence 45789999 789999998853 5699999865421 2334556778889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ |+|.+++..+ ..+++..+++++.|++.||+|||++||+||||||+|||++.++.++++||+............
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999 6999998653 458999999999999999999999999999999999999999999999998654332111110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCC-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDP- 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~- 256 (1553)
...........++..|+|||.+... ...++.++||||+||++|||++|.+||....... ...+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQN--------LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 230 (327)
T ss_pred cccccccccccceecccChHHhhcc--------cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccc
Confidence 0001111223456779999987521 2357889999999999999999999996422111 01000000
Q ss_pred -----------------------------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 -----------------------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 -----------------------------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........++.+++||.+||+.||++|||++|+++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 231 LDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred ccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000111234679999999999999999999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=356.83 Aligned_cols=253 Identities=20% Similarity=0.240 Sum_probs=206.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+....||.|.||+||-|...+ ...|+|-+...+.. ......+.+|..+|..++|||+++||++-..+...||.
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~---~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD---HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc---cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 77888899999999999998854 45899988665322 44455677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||||+ |+|.+.+......++.-.+++..|++.|+.|||++|||||||||+||+++.+|.+|++|||.|..+..+..
T Consensus 1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~--- 1389 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ--- 1389 (1509)
T ss_pred HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh---
Confidence 99999 79999998887788999999999999999999999999999999999999999999999999987644321
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC-chHHHH--HHhcCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE-LSHLLA--YRRGQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~-~~~~~~--~~~~~~~~~~~ 259 (1553)
++..-.....||+.|||||++.+.. +.....++||||||||+.||.||+.||. .+.-.+ |.-+.-. .+.
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~-------~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh-~Pq 1461 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTK-------GKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGH-KPQ 1461 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccc-------cCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccC-CCC
Confidence 1222233556899999999997543 2345678999999999999999988884 333222 3222222 233
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+|...+.+-+++|.+||+.||++|.++.|+|+|
T Consensus 1462 ~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1462 IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 444467789999999999999999999999998
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-32 Score=312.61 Aligned_cols=256 Identities=18% Similarity=0.143 Sum_probs=202.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCC-CcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGD-YIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~-~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|...+ +.+|+|.+..... ..........+.+|+++++.++|+||+++++++.+.+..|++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47889999999999999998754 5699998865421 122334456688899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++.....+++..+..++.|++.||+|||+.||+|+||||+||++++++.++|+|||.+......... .
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~ 159 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH-G 159 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc-c
Confidence 99998 599999988777899999999999999999999999999999999999999999999999988754221111 0
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-HHh-cCC-CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRR-GQY-DPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~-~~~-~~~~~ 259 (1553)
..........++..|+|||.+. +..++.++|+|||||++|+|++|.+||...+... ... ... ...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 229 (265)
T cd06631 160 THSNMLKSMHGTPYWMAPEVIN----------ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR 229 (265)
T ss_pred cccccccccCCCccccChhhhc----------CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC
Confidence 1111223345788899999764 3456789999999999999999999986433221 111 111 12223
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...+..+.++|.+||+.+|++||++.++++|
T Consensus 230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 230 LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 445567889999999999999999999999987
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=320.40 Aligned_cols=250 Identities=15% Similarity=0.131 Sum_probs=197.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|.+.+.||.|+||+||+|.+.+ ..||+|++.... .....+.+.+|..+++.++||||+++++++.+..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA----EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC----CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 57888999999999999998742 459999986432 2334566888889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
..++++||+. ++|.+++..+ ..+++..+..++.|++.||.|||++||+||||||+|||++.++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence 9999999999 6999988432 2478889999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.+||+|||+++..... ..........+++.|+|||.+. ...++.++|||||||++|||++ |.+|
T Consensus 162 ~~kl~Dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~el~~~g~~p 226 (283)
T cd05091 162 NVKISDLGLFREVYAA-----DYYKLMGNSLLPIRWMSPEAIM----------YGKFSIDSDIWSYGVVLWEVFSYGLQP 226 (283)
T ss_pred ceEecccccccccccc-----hheeeccCccCCccccCHHHHh----------cCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 9999999988754221 1111223344567899999764 3357889999999999999998 7888
Q ss_pred CCchHHHHHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 241 FELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 241 f~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
|.............. .....+...+..+.+++.+||+.+|++||++++++..++
T Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 227 YCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 865433322221111 111233445678999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-32 Score=312.00 Aligned_cols=242 Identities=17% Similarity=0.160 Sum_probs=195.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-EeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQ-ETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~-~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||++...+..+++|.+... ...+.+.+|+.+++.++||||+++++++ ..+...|++|
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~-------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND-------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC-------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 7899999999999999999999888999998532 1234577888999999999999999875 4556799999
Q ss_pred cccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++..++ .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999 69999997643 48899999999999999999999999999999999999999999999999887542211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcC-CCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~ 259 (1553)
....++..|+|||.+. ...++.++|||||||++|||++ |++||............ ......
T Consensus 157 -------~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 219 (256)
T cd05082 157 -------DTGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 219 (256)
T ss_pred -------CCCccceeecCHHHHc----------cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 1222346799999764 3357889999999999999997 89998755443322111 111122
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...++.++++|.+||+.||++|||+.++++.+.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 220 APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 34455678999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-32 Score=311.50 Aligned_cols=245 Identities=16% Similarity=0.138 Sum_probs=191.0
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||.||+|.+. ++.+|+|.+... ...+....+.+|.++++.++||||+++++++......|+||||++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 76 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET----LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 76 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc----CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeecc
Confidence 46899999999999884 467999987543 123445667888899999999999999999999999999999998
Q ss_pred -CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 109 -NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 109 -gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
++|.+++... +.+++.++..++.|++.||.|||++||+||||||+|||++.++.+||+|||.+..... .....
T Consensus 77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-----~~~~~ 151 (252)
T cd05084 77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEED-----GVYAS 151 (252)
T ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccc-----ccccc
Confidence 5999999654 4589999999999999999999999999999999999999999999999998864321 01111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcC-CCCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIP 264 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~~~~~~ 264 (1553)
.......+..|+|||.+. ...++.++|||||||++|||++ |.+||............ .......+...
T Consensus 152 ~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (252)
T cd05084 152 TGGMKQIPVKWTAPEALN----------YGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELC 221 (252)
T ss_pred cCCCCCCceeecCchhhc----------CCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccC
Confidence 111112345699999764 3457889999999999999998 78888543222211111 11112234455
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 265 DSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+..+.+++.+||+.||++||++.++++.+.
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-32 Score=319.98 Aligned_cols=247 Identities=15% Similarity=0.094 Sum_probs=191.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|...+ ..+++|.+... ......+.+.+|..+++++ +||||+++++++......
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF----ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc----CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 68999999999999999998754 23678877432 1223345677888888888 799999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 101 YLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
|++|||++ ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence 99999998 6999999643 248889999999999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~ 242 (1553)
||+|||++...... ........+..|+|||.+. ...++.++|||||||++|||++ |.+||.
T Consensus 159 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlG~il~el~t~g~~pf~ 220 (297)
T cd05089 159 KIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLN----------YSVYTTKSDVWSFGVLLWEIVSLGGTPYC 220 (297)
T ss_pred EECCcCCCccccce--------eccCCCCcCccccCchhhc----------cCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 99999987532110 0001112244699999663 3457889999999999999997 888986
Q ss_pred chHHHHHHh-cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 243 LSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 243 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
......... .........+...+..+++||.+||+.||.+||+++++++.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 221 GMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred CCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 544332211 1111112234455678999999999999999999999987654
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=311.86 Aligned_cols=252 Identities=19% Similarity=0.191 Sum_probs=198.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~ 101 (1553)
+|+..+.||+|+||.||+|.+. +..|++|++...............+.+|+.+++.++||||+++++++.+ +...|
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6889999999999999999875 3679999987653322334455678888999999999999999998865 46789
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+++||++ ++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 9999998 599999987777999999999999999999999999999999999999999999999999988754211110
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHhcCC-CCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRRGQY-DPSQ 258 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~~~~-~~~~ 258 (1553)
.. ......++..|+|||.+. +..++.++|+||+||++|||++|.+||..... ..+..... ...+
T Consensus 163 ~~----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 228 (266)
T cd06651 163 GT----GIRSVTGTPYWMSPEVIS----------GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP 228 (266)
T ss_pred CC----ccccCCccccccCHHHhC----------CCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCC
Confidence 00 011234677899999764 33568899999999999999999999964432 22222111 1223
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...++.++++| +||..+|++||+++|+++|
T Consensus 229 ~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 229 QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 34555567899999 6777899999999999998
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-32 Score=316.42 Aligned_cols=256 Identities=15% Similarity=0.109 Sum_probs=197.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
.+|++.+.||+|+||.||+|.+++ ..||+|.+.... . ......+.+|..+++.++||||+++++++.+.
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---S-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---C-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 379999999999999999997642 359999875431 1 22234566788899999999999999999988
Q ss_pred CEEEEEecccc-CCHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEe
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLS 166 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~ 166 (1553)
...|+||||++ |+|.+++... +.++...+..++.||+.||.|||++||+||||||+|||+++++.++|+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 99999999998 6999999642 335677889999999999999999999999999999999999999999
Q ss_pred ecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH
Q 000410 167 DFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH 245 (1553)
Q Consensus 167 DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~ 245 (1553)
|||+++........ .......++..|+|||.+. ...++.++|||||||++|||++ |.+||....
T Consensus 162 Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~----------~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~ 226 (288)
T cd05061 162 DFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLK----------DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 226 (288)
T ss_pred cCCccccccccccc-----cccCCCcccccccCHHHhc----------cCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99988754221110 0111223356799999764 3457889999999999999998 688886544
Q ss_pred HHHHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCC
Q 000410 246 LLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299 (1553)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP 299 (1553)
...+...... .....+...++.+++++.+||+.||++||++.++++.++....|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 227 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 3333221111 11122334457899999999999999999999999988766554
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-31 Score=311.68 Aligned_cols=246 Identities=16% Similarity=0.159 Sum_probs=196.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||+|... +..|++|++.+.. .....+.+|+++++.++||||+++++++..+...+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc------hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence 6899999999999999999886 3669999985431 1134567788999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ ++|.+++... ..+++..+..++.|++.||+|||++|++||||||+||++++++.+||+|||.+........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~- 159 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY- 159 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee-
Confidence 99998 6999998653 3589999999999999999999999999999999999999999999999999875421110
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~ 256 (1553)
. .......+..|+|||.+. +..++.++|||||||++|||++ |.+||........ ....+
T Consensus 160 ----~-~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-- 222 (263)
T cd05052 160 ----T-AHAGAKFPIKWTAPESLA----------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY-- 222 (263)
T ss_pred ----e-ccCCCCCccccCCHHHhc----------cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC--
Confidence 0 001122345699999663 3467889999999999999998 8899865443332 22222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
....+...+..+.++|.+||+.||++||++.++++.+..
T Consensus 223 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 223 RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 222344456789999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-32 Score=317.54 Aligned_cols=251 Identities=17% Similarity=0.168 Sum_probs=196.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|++.+.||+|+||.||++.+.+ ..+|+|.+.... . ......+.+|+++++.+ +||||+++++++..+
T Consensus 13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~---~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA---T-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC---C-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 79999999999999999998743 458999886431 1 22334577888899999 799999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC
Q 000410 98 KAAYLLRQYFF-NSLRDRLST----------------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 160 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~----------------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~ 160 (1553)
...|++|||+. |+|.+++.. ...+++.++..++.||+.||+|||++||+||||||+|||++.+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED 168 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence 99999999998 699999853 2358899999999999999999999999999999999999999
Q ss_pred CcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCC
Q 000410 161 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 239 (1553)
Q Consensus 161 ~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~ 239 (1553)
+.+||+|||.++...... .........++..|+|||.+. ...++.++|||||||++|||++ |..
T Consensus 169 ~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g~~ 233 (293)
T cd05053 169 HVMKIADFGLARDIHHID-----YYRKTTNGRLPVKWMAPEALF----------DRVYTHQSDVWSFGVLLWEIFTLGGS 233 (293)
T ss_pred CeEEeCcccccccccccc-----ceeccCCCCCCccccCHHHhc----------cCCcCcccceeehhhHHHHHhcCCCC
Confidence 999999999987652211 111111223456799999663 3457889999999999999997 888
Q ss_pred CCCchHHHHHHhcCC-CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 240 FFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 240 pf~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
||............. ......+...+..+.+|+.+||..||++|||+.|+++++..
T Consensus 234 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 234 PYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred CCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 886544332222111 11112333446789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=320.71 Aligned_cols=248 Identities=21% Similarity=0.261 Sum_probs=193.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. +..|++|++...... ......+.+|+++++.++||||+++++++.+....|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~---~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLV 77 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc---ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEE
Confidence 4788999999999999999985 367999998654211 12234466778899999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||+++....+..
T Consensus 78 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--- 154 (284)
T cd07839 78 FEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR--- 154 (284)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC---
Confidence 99999999998864 56699999999999999999999999999999999999999999999999999875432211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC-CCchHHHHH----Hhc-----
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF-FELSHLLAY----RRG----- 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p-f~~~~~~~~----~~~----- 252 (1553)
......+++.|+|||.+.+ ...++.++|||||||++|+|++|..| |........ .+.
T Consensus 155 ----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 221 (284)
T cd07839 155 ----CYSAEVVTLWYRPPDVLFG---------AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 221 (284)
T ss_pred ----CcCCCccccCCcChHHHhC---------CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 1123345788999998742 23468899999999999999998544 543322111 000
Q ss_pred -----------CCCCCCC---------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 -----------QYDPSQH---------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 -----------~~~~~~~---------~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+..... .....++.++++|.+||+.||.+|||++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 222 EESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000000 011235789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=313.37 Aligned_cols=250 Identities=16% Similarity=0.131 Sum_probs=195.9
Q ss_pred CccceEEEEEeeccCcEEEEEEEEC--Cc----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHD--EG----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET 96 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~fg~V~~a~~~--~~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~ 96 (1553)
...+|++.+.||+|+||.||+|++. +. .||+|++.... .....+.+.+|..+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT----SPKANKEILDEAYVMAGVGSPYVCRLLGICLT 80 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC----CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC
Confidence 3448999999999999999999863 22 37899886442 23445667788889999999999999998875
Q ss_pred CCEEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
. ..++++||++ |+|.+++..+ +.+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 S-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred C-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 4 4789999999 7999999764 56899999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HH
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YR 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~ 250 (1553)
..... ........+++.|+|||.+. ...++.++|||||||++|||++ |.+||....... ..
T Consensus 160 ~~~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 224 (279)
T cd05109 160 DIDET-----EYHADGGKVPIKWMALESIL----------HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 224 (279)
T ss_pred ccccc-----eeecCCCccchhhCCHHHhc----------cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 32211 11112223456799999764 3457889999999999999998 899987543322 22
Q ss_pred hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 251 RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 251 ~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... ..+...+..+.++|.+||..||++||++.++++.+.
T Consensus 225 ~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 225 EKGERL--PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred HCCCcC--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 221111 123345678999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=309.19 Aligned_cols=243 Identities=18% Similarity=0.205 Sum_probs=199.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+|++.+.||+|+||.||+|...++.|++|.+.... ...+++..|..+++.++||||+++++++.+....|+|||
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDS------TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hccceeeeecCCCceEEEEEecCcEEEEEEeccch------hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 78999999999999999999999999999986541 145567788899999999999999999998899999999
Q ss_pred ccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 106 YFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|++ ++|.+++..+. .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence 999 69999997665 68999999999999999999999999999999999999999999999999987552111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~~ 260 (1553)
.....+..|+|||.+. ...++.++|||||||++|||++ |..||............. ......
T Consensus 157 ------~~~~~~~~~~ape~~~----------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd05039 157 ------DSGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEA 220 (256)
T ss_pred ------ccCCCcccccCchhhc----------CCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 1122345699999764 3456789999999999999997 898986554333221111 111223
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+...++.+.++|.+||..+|++||+++++++.+.
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 221 PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 3445678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=309.74 Aligned_cols=246 Identities=13% Similarity=0.119 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc-eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~-~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||++++.++ .+|+|.+.... .. ...+.+|..+++.++||||+++++++......|++|
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~--~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc--cc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 789999999999999999988764 59999875431 11 234677888999999999999999999888899999
Q ss_pred cccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||+. |+|.+++... ..+++.++..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.++....+.
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---- 154 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE---- 154 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc----
Confidence 9998 6999999763 468999999999999999999999999999999999999999999999999887542211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHH-hcCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~-~~~~~~~~~~ 260 (1553)
.. ......++..|+|||.+. ...++.++|||||||++|+|++ |..||......... ..........
T Consensus 155 -~~-~~~~~~~~~~y~~pe~~~----------~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd05113 155 -YT-SSVGSKFPVRWSPPEVLL----------YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR 222 (256)
T ss_pred -ee-ecCCCccChhhCCHHHHh----------cCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCC
Confidence 00 011122456799999764 3357889999999999999998 88888643322211 1111111123
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...++.+++++.+||+.||.+||++.++++.+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 344568999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=312.97 Aligned_cols=250 Identities=14% Similarity=0.097 Sum_probs=196.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||++...+ ..|++|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 78999999999999999998753 459999975431 1223445677889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEee
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSD 167 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~D 167 (1553)
..|+||||++ |+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECC
Confidence 9999999998 6999998542 2367889999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL 246 (1553)
Q Consensus 168 FG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~ 246 (1553)
||.++...... .........++..|+|||.+. ...++.++|||||||++|||++ |.+||.....
T Consensus 163 fg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 227 (277)
T cd05032 163 FGMTRDIYETD-----YYRKGGKGLLPVRWMAPESLK----------DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227 (277)
T ss_pred cccchhhccCc-----ccccCCCCCccccccCHHHHh----------cCCCCcccchHHHHHHHHHhhccCCCCCccCCH
Confidence 99987553221 111112334567899999764 3457889999999999999998 8999965433
Q ss_pred HHHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 LAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 ~~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
....+.. .......+...+..+.++|.+||+.+|++|||+.++++.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 228 EEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 2221111 11112233344678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-31 Score=314.87 Aligned_cols=246 Identities=17% Similarity=0.182 Sum_probs=195.1
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|+..+.||+|+||.||++.+.. +.||+|.+.+... ........+..|+.+++.++|+||+++++.+.+++..|+||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhc--cchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence 6778999999999999999864 6799999865421 12233445667888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--- 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc---
Confidence 9998 5999988543 348999999999999999999999999999999999999999999999999886431110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~ 257 (1553)
......|+..|+|||.+. +..++.++||||+||++|+|++|.+||..... ...........
T Consensus 157 -----~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05630 157 -----TIKGRVGTVGYMAPEVVK----------NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ 221 (285)
T ss_pred -----cccCCCCCccccChHHHc----------CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh
Confidence 012235788899999764 34578899999999999999999999974321 11111111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
...+...++.+++||.+||+.||++||| ++|+++|
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 222 EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 2233445678999999999999999999 8999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.2e-32 Score=314.80 Aligned_cols=248 Identities=19% Similarity=0.168 Sum_probs=196.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|++.... ......+.+|..+++.++||||+++++.+..+...|+|
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 68888999999999999998853 669999986542 11223466778899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ ++|.+++...+.+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+.........
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~-- 162 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK-- 162 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc--
Confidence 99999 599999988888999999999999999999999999999999999999999999999999988654221111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HH---HHHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LL---AYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~---~~~~~~~~~~~ 258 (1553)
.....|+..|+|||.+... ....++.++|+||+||++|+|++|.+||.... .. ........+..
T Consensus 163 -----~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T cd06645 163 -----RKSFIGTPYWMAPEVAAVE-------RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPK 230 (267)
T ss_pred -----cccccCcccccChhhhccc-------cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCc
Confidence 1123467889999987421 23457889999999999999999988874322 11 11222222211
Q ss_pred CCC-CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLE-KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~-~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... ...+..++++|.+||..||++||+++++++|
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 231 LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 111 1235679999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=328.18 Aligned_cols=250 Identities=16% Similarity=0.170 Sum_probs=194.7
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEe
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQET 96 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~ 96 (1553)
.+|++++.||+|+||.||+|.+.. ..||||++.... .....+.+.+|+++++.+. ||||+++++++..
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA----RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC----ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 378899999999999999998632 259999985431 1233456788889999996 9999999999999
Q ss_pred CCEEEEEecccc-CCHHHHhcCC---------------------------------------------------------
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP--------------------------------------------------------- 118 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~~--------------------------------------------------------- 118 (1553)
....|||||||+ |+|.+++..+
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 999999999999 6999887532
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec
Q 000410 119 ---------------------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 159 (1553)
Q Consensus 119 ---------------------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~ 159 (1553)
..+++.++..++.||+.||+|||++||+||||||+|||++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC
Confidence 13778888999999999999999999999999999999999
Q ss_pred CCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CC
Q 000410 160 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 238 (1553)
Q Consensus 160 ~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 238 (1553)
++.+||+|||+++........ .......+++.|+|||.+. +..++.++|||||||++|||++ |.
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ellt~g~ 337 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIF----------DNLYTTLSDVWSYGILLWEIFSLGG 337 (400)
T ss_pred CCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhc----------CCCCCchhhHHHHHHHHHHHHHCCC
Confidence 999999999998754221110 0112233567799999764 3457889999999999999997 78
Q ss_pred CCCCchH----HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 239 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 239 ~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.||.... .......... ...+...+..+.+++.+||+.||++||++.++.+.+..
T Consensus 338 ~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 338 TPYPGMIVDSTFYNKIKSGYR--MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred CCCcccchhHHHHHHHhcCCC--CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 8885421 1111222211 12233446789999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.5e-32 Score=314.85 Aligned_cols=244 Identities=23% Similarity=0.252 Sum_probs=188.6
Q ss_pred EEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 28 VLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 28 ~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
++.+.||.|.||.||+|.+. +..|+||++... ...+..+.+.+|.+.++.++||||+++++++......+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~----~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~ 77 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS----SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLF 77 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT----SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc----cccccceeeeeccccccccccccccccccccccccccc
Confidence 57899999999999999987 356999999432 22334567778889999999999999999999888899
Q ss_pred EEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 102 LLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+|+||++ |+|.+++... ..+++.++..|+.||+.||.|||+++++||||+++||++++++.+||+|||++......
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~- 156 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK- 156 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999 6999999876 66999999999999999999999999999999999999999999999999998765211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH----HHhcC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA----YRRGQ 253 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~----~~~~~ 253 (1553)
..............|+|||.+. ...++.++||||||+++|||++ |..||....... +.++.
T Consensus 157 ----~~~~~~~~~~~~~~~~aPE~~~----------~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~ 222 (259)
T PF07714_consen 157 ----SKYKNDSSQQLPLRYLAPEVLK----------DGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ 222 (259)
T ss_dssp ----SSEEESTTSESGGGGS-HHHHH----------HSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE
T ss_pred ----cccccccccccccccccccccc----------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 1111222333567799999775 2347899999999999999999 578886433322 22222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. ...+...+..+.++|.+||..||++||++.++++.+
T Consensus 223 ~---~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 R---LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp E---TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred c---ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2 123344567899999999999999999999999864
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=310.02 Aligned_cols=244 Identities=19% Similarity=0.191 Sum_probs=196.7
Q ss_pred EEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|... +..|++|++..... ....+.+.+|++.++.++||||+++++++.++...++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 76 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS----EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLE 76 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc----hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEE
Confidence 46999999999999986 45699999865422 1145667888899999999999999999999999999999
Q ss_pred ccc-CCHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 106 YFF-NSLRDRLSTP---------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~---------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
|++ ++|.+++... ..+++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+....
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 996 7999999875 679999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY 254 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~ 254 (1553)
.... ........++..|+|||.+. ...++.++||||+||++|+|++ |.+||.......+.....
T Consensus 157 ~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~ 221 (262)
T cd00192 157 DDDY-----YRKKTGGKLPIRWMAPESLK----------DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR 221 (262)
T ss_pred cccc-----cccccCCCcCccccCHHHhc----------cCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 2211 01112334577899999764 2367889999999999999999 599997554333222111
Q ss_pred -CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 -DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 -~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
......+...+..+.+++.+||+.||.+||+++|+++++
T Consensus 222 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 222 KGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred cCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 112223444467899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=306.58 Aligned_cols=247 Identities=21% Similarity=0.260 Sum_probs=196.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-CCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-DKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~~~~~l 102 (1553)
+|++.+.||.|+||.||++.+.. +.|++|.+..... .....+.+.+|.++++.++|||++++++.+.. +...|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~l 77 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA---SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYI 77 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc---CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEE
Confidence 48999999999999999998854 5699999865421 12334557788899999999999999988764 456899
Q ss_pred Eecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 103 LRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
+|||++ ++|.+++.. ...+++.+++.++.|++.||.+||++||+||||||+||+++.++.++|+|||+++.......
T Consensus 78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 999998 599999865 34589999999999999999999999999999999999999999999999999875532211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~~ 258 (1553)
......+++.|+|||.+. +..++.++|+||+||++|+|++|++||...+......... ...+
T Consensus 158 -------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
T cd08223 158 -------MASTLIGTPYYMSPELFS----------NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP 220 (257)
T ss_pred -------ccccccCCcCccChhHhc----------CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC
Confidence 112334678899999764 3457789999999999999999999997654333211111 1111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...++.+.++|.+||+.||++||++.++++|
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 2334456789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-33 Score=324.35 Aligned_cols=260 Identities=19% Similarity=0.176 Sum_probs=205.3
Q ss_pred ccccccCCCccceEEEEEeeccCcEEEEEEEECCc--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEE
Q 000410 15 EYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQF 92 (1553)
Q Consensus 15 ~~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~ 92 (1553)
++.-.|+...--|.++..||.|+||+||+|..++. ..|.|++... . ++..+.+.-|++||..++||+|+++++
T Consensus 22 ehv~rdlnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk----s-eEELEDylVEIeILa~CdHP~ivkLl~ 96 (1187)
T KOG0579|consen 22 EHVYRDLNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK----S-EEELEDYLVEIEILAECDHPVIVKLLS 96 (1187)
T ss_pred HHHhccCCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc----c-hhHHhhhhhhhhhhhcCCChHHHHHHH
Confidence 34445565555688889999999999999998763 2677877543 1 233344556779999999999999999
Q ss_pred EEEeCCEEEEEeccccCC-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 93 WQETDKAAYLLRQYFFNS-LRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 93 ~~~~~~~~~lV~E~~~gs-L~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
.|..++.++|+.|||+|. ....+-. ...|++.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.
T Consensus 97 ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGV 176 (1187)
T KOG0579|consen 97 AYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGV 176 (1187)
T ss_pred HHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccc
Confidence 998899999999999964 4444432 34599999999999999999999999999999999999999999999999997
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-H---
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-L--- 246 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~--- 246 (1553)
+.... ......++..|||+|||||+..... ....+|+.++||||||++|.||.-+.||...-+ +
T Consensus 177 SAKn~-------~t~qkRDsFIGTPYWMAPEVvmCET-----~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl 244 (1187)
T KOG0579|consen 177 SAKNK-------STRQKRDSFIGTPYWMAPEVVMCET-----FKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL 244 (1187)
T ss_pred cccch-------hHHhhhccccCCcccccchheeecc-----ccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH
Confidence 64321 1122346778999999999987543 457899999999999999999999999986433 2
Q ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 247 LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++.+... |....+...+..+.+++.+||.+||..||++.++|+|
T Consensus 245 lKiaKSeP-PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 245 LKIAKSEP-PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHhhcCC-CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 22222221 2223444556789999999999999999999999998
|
|
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-31 Score=312.90 Aligned_cols=250 Identities=16% Similarity=0.115 Sum_probs=194.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||+|.+.+ ..|++|.+... ........+.+|..+++.++||||+++++++.+..
T Consensus 7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~----~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES----CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 68999999999999999998854 45888877433 11233455777888999999999999999998888
Q ss_pred EEEEEecccc-CCHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC---cEEEee
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPP-------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN---WLYLSD 167 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~~-------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~---~vkL~D 167 (1553)
..|+||||+. ++|.+++.... .+++.++..++.||+.||+|||++|++||||||+||+++.++ .+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999998 69999986532 488999999999999999999999999999999999998765 599999
Q ss_pred cCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL 246 (1553)
Q Consensus 168 FG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~ 246 (1553)
||+++...... ..........+..|+|||.+. +..++.++|||||||++|||++ |..||.....
T Consensus 163 fg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~ 227 (277)
T cd05036 163 FGMARDIYRAS-----YYRKGGRAMLPIKWMPPEAFL----------DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN 227 (277)
T ss_pred CccccccCCcc-----ceecCCCCCccHhhCCHHHHh----------cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99987652111 000011112245799999764 3457899999999999999997 8999976443
Q ss_pred HHHHhcCC-CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 LAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 ~~~~~~~~-~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
........ ......+...+..+.+++.+||+.||++||++.++++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 228 QEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 33222111 1112233444678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-31 Score=318.20 Aligned_cols=252 Identities=18% Similarity=0.175 Sum_probs=196.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~ 95 (1553)
+|.+.+.||+|+||.||++++.+ ..+|+|++.... . ......+.+|.++++.+ +||||+++++++.
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---T-EKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---C-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 79999999999999999998632 359999886431 1 22234566788889988 7999999999999
Q ss_pred eCCEEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
.+...|+||||++ |+|.+++..+ ..+++.++..++.|++.||+|||++|++||||||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 9999999999999 6999999653 2478899999999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 237 (1553)
.++.++|+|||.++....... ........+++.|+|||.+. +..++.++|||||||++|||++ |
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~el~~~g 239 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALF----------DRIYTHQSDVWSFGVLLWEIFTLG 239 (307)
T ss_pred CCCcEEECCCcccccccccch-----hhccccCCCccceeChHHhc----------cCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999999999998865421110 00011122346799999764 3457889999999999999998 7
Q ss_pred CCCCCchHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcc
Q 000410 238 VPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 238 ~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 296 (1553)
.+||............ .......+...+..+.+||.+||..+|++||++.++++++...
T Consensus 240 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 240 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred CCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 8888765543322211 1111123344567899999999999999999999999987643
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.7e-31 Score=308.66 Aligned_cols=251 Identities=17% Similarity=0.129 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. ++.||||.+..... ........+.+|+++++.++||||+++++++.+.+..|++
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM--MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc--CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 7999999999999999999885 46799998865321 1234455677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+||++ ++|.+++. ....+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 99999 59988874 23458999999999999999999999999999999999999999999999999887542111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhc--CC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRG--QY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~--~~ 254 (1553)
.......+++.|+|||.+. +..++.++|+||+||++|||++|..||.... ...+... ..
T Consensus 161 -------~~~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T cd08228 161 -------TAAHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC 223 (267)
T ss_pred -------HHHhcCCCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC
Confidence 0112334678899999764 2356788999999999999999987874321 1111111 11
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...+......+..++++|.+||+.+|++||+++++++.+++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 11112223345789999999999999999999999998654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-33 Score=344.28 Aligned_cols=253 Identities=19% Similarity=0.235 Sum_probs=207.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+++.||+|+||.|.+++++. ..||+|++.|-. .-......-|.+|+.+|...+.+.|+.++-.|++++++|+|
T Consensus 76 DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~e--MlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 76 DFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWE--MLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred hhHHHHHhcccccceeEEEEeeccccchhHHHhhHHH--HhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 78999999999999999999975 569999997631 00112234588999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|..++++...+++..+++|+..|+.||.-+|+.|+|||||||+|||++..|++||+|||.+-... .
T Consensus 154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~------~ 227 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD------A 227 (1317)
T ss_pred EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC------C
Confidence 99999 6999999998899999999999999999999999999999999999999999999999999886542 2
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-HHhcCCC-CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRRGQYD-PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~~~~~-~~~~~ 260 (1553)
+......+..|||.|++||++...+.+ .+.|++.+|.||+|+++|||+.|..||..+.+.. |.+..-. ....+
T Consensus 228 dG~V~s~~aVGTPDYISPEvLqs~~~~-----~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~F 302 (1317)
T KOG0612|consen 228 DGTVRSSVAVGTPDYISPEVLQSQGDG-----KGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSF 302 (1317)
T ss_pred CCcEEeccccCCCCccCHHHHHhhcCC-----ccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCC
Confidence 334455678899999999999754432 4789999999999999999999977776555433 3221111 11112
Q ss_pred C--CCCCHHHHHHHHHhcccCcCCCCC---HHHHHHh
Q 000410 261 E--KIPDSGIRKMILHMIQLEPELRFS---AESYLQN 292 (1553)
Q Consensus 261 ~--~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 292 (1553)
| ...++++++||.+++. +|+.|.. ++++-.|
T Consensus 303 P~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 303 PDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred CcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 2 2357899999999996 6888997 9999998
|
|
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.1e-31 Score=308.59 Aligned_cols=245 Identities=15% Similarity=0.127 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||+|.+.+ +.||+|.+.... . ..+.+.+|..+++.++||||+++++++...+..|++|
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--M----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--c----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 68999999999999999998755 569999885431 1 1344677888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++.... .+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE- 159 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-
Confidence 9996 79999997654 6899999999999999999999999999999999999999999999999998765311100
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~~ 257 (1553)
.......+..|+|||.+. ...++.++|||||||++|||++ |++||........ ....+..
T Consensus 160 -----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~- 223 (261)
T cd05068 160 -----AREGAKFPIKWTAPEAAL----------YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM- 223 (261)
T ss_pred -----ccCCCcCceeccCccccc----------cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 001111235699999653 3457889999999999999999 8999965433221 1222211
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..+...+..+.+++.+||+.||++||+++++++.++
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 224 -PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred -CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 123344678999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.8e-31 Score=312.80 Aligned_cols=250 Identities=18% Similarity=0.151 Sum_probs=195.0
Q ss_pred cceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
.+|++.+.||+|+||.||++... +..+++|.+... .......+.+|.++++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-----SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 47899999999999999999742 245888887543 133445688888999999999999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP---------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~---------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
...|++|||++ ++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 99999999999 69999986532 478999999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.++|+|||++....... .........+++.|+|||.+. +..++.++|||||||++|||++ |.+|
T Consensus 160 ~~kL~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g~~p 224 (280)
T cd05092 160 VVKIGDFGMSRDIYSTD-----YYRVGGRTMLPIRWMPPESIL----------YRKFTTESDIWSFGVVLWEIFTYGKQP 224 (280)
T ss_pred CEEECCCCceeEcCCCc-----eeecCCCccccccccCHHHhc----------cCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence 99999999887542111 111112223457799999764 3457889999999999999998 7889
Q ss_pred CCchHHH-HHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 241 FELSHLL-AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 241 f~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
|...... .+...........+...++.+.++|.+||+.||++||+++++++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 225 WYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 8543222 12111111111223344678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-31 Score=315.11 Aligned_cols=254 Identities=19% Similarity=0.216 Sum_probs=199.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+.. +.|++|.+.+.. .........+.+|+++++.++||||+++++.+..+...|+|
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQN--LILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhh--hhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence 68899999999999999999865 569999886541 12233445677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ ++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++........
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 99999 599999988778999999999999999999999999999999999999999999999999988642111100
Q ss_pred ------CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh---
Q 000410 181 ------PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR--- 251 (1553)
Q Consensus 181 ------~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~--- 251 (1553)
............++..|+|||.+. ...++.++|||||||++|||++|..||..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~ 229 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVIL----------RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI 229 (305)
T ss_pred cccccccchhhccccCCccCccccCchhcc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 000011111234677899999764 2357889999999999999999988886544333222
Q ss_pred -cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHHHh
Q 000410 252 -GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS---AESYLQN 292 (1553)
Q Consensus 252 -~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 292 (1553)
+... .+......+..++++|.+||+.||++||+ +.++++|
T Consensus 230 ~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 230 SDDIE-WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred hcccC-CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 2111 11122245678999999999999999998 6777776
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.2e-32 Score=324.89 Aligned_cols=250 Identities=18% Similarity=0.186 Sum_probs=192.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEe-
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQET- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~- 96 (1553)
+|++.+.||.|+||.||+|...+ +.||+|++.... . ....+.+..|..+++.+ +||||+++++++..
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~---~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA---T-ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC---C-HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 78999999999999999997532 469999885431 1 22334566778889888 79999999998754
Q ss_pred CCEEEEEecccc-CCHHHHhcCC---------------------------------------------------------
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP--------------------------------------------------------- 118 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~~--------------------------------------------------------- 118 (1553)
+...|++|||++ ++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 467899999999 5999988532
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCC
Q 000410 119 ----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKR 194 (1553)
Q Consensus 119 ----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt 194 (1553)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++....... ........++
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-----~~~~~~~~~~ 238 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGDARLP 238 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----hhhccCCCCC
Confidence 1478899999999999999999999999999999999999999999999999876522110 0111233445
Q ss_pred ccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH----HHHHHhcCCCCCCCCCCCCCHHHH
Q 000410 195 LCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIR 269 (1553)
Q Consensus 195 ~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 269 (1553)
..|+|||.+. +..++.++|||||||++|||++ |.+||.... ......... ....+...++.+.
T Consensus 239 ~~y~aPE~~~----------~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 306 (337)
T cd05054 239 LKWMAPESIF----------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT--RMRAPEYATPEIY 306 (337)
T ss_pred ccccCcHHhc----------CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC--CCCCCccCCHHHH
Confidence 6799999764 3468899999999999999997 899986422 111111111 1122334567899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHhhhcc
Q 000410 270 KMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa~elL~~~~~~ 296 (1553)
+++.+||+.+|++||+++|+++++...
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 999999999999999999999997643
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-31 Score=316.01 Aligned_cols=244 Identities=14% Similarity=0.113 Sum_probs=196.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+.. ..+++|.+... ........+.+|+++++.++||||+++++++.+++..|+|
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE----IKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc----cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEE
Confidence 68999999999999999999864 45888887543 1234556678899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++...+.+++..+..++.|++.||.|||+ +|++||||||+|||++.++.++|+|||++......
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 153 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 153 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc----
Confidence 99998 5999999887789999999999999999999997 69999999999999999999999999987643211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh---cCCC---
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR---GQYD--- 255 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~---~~~~--- 255 (1553)
......++..|+|||.+. +..++.++|+|||||++|+|++|.+||...+...... ....
T Consensus 154 -----~~~~~~~~~~~~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 218 (308)
T cd06615 154 -----MANSFVGTRSYMSPERLQ----------GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGE 218 (308)
T ss_pred -----ccccCCCCcCccChhHhc----------CCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCcccccc
Confidence 112345678899999763 3357889999999999999999998886433222111 0000
Q ss_pred -------------------------------CCCCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 -------------------------------PSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 -------------------------------~~~~~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.. ....+.+++++|.+||..||++||+++++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 219 AKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001 11245679999999999999999999999998
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=318.16 Aligned_cols=248 Identities=15% Similarity=0.110 Sum_probs=192.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--c--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|.+.. . .+++|.+... ........+.+|++++..+ +||||+++++++..++..
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc----CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 78999999999999999998753 2 2566665422 1234456677888899999 899999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 101 YLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
|+||||++ ++|.+++... +.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcE
Confidence 99999998 6999998643 257899999999999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~ 242 (1553)
||+|||+++....... ......+..|+|||.+. ...++.++|||||||++|||++ |.+||.
T Consensus 164 kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~ellt~g~~p~~ 225 (303)
T cd05088 164 KIADFGLSRGQEVYVK--------KTMGRLPVRWMAIESLN----------YSVYTTNSDVWSYGVLLWEIVSLGGTPYC 225 (303)
T ss_pred EeCccccCcccchhhh--------cccCCCcccccCHHHHh----------ccCCcccccchhhhhHHHHHHhcCCCCcc
Confidence 9999998763211000 01112345699999764 3357889999999999999998 888986
Q ss_pred chHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 243 LSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
........... .......+...++.+.+||.+||+.+|++||+++++++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 226 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred cCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 44333222111 111111223345789999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=310.06 Aligned_cols=246 Identities=16% Similarity=0.125 Sum_probs=194.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||++++.. +.+|+|++.+... . ...+.+|.++++.++||||+++++++......|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM--S----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC--C----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence 68899999999999999998865 4699999854311 1 234566778999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||++ ++|.+++..+ ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||.++........
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-- 156 (256)
T cd05059 79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-- 156 (256)
T ss_pred ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc--
Confidence 9998 5999999653 46899999999999999999999999999999999999999999999999988754211100
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHH-hcCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~-~~~~~~~~~~ 260 (1553)
......++..|+|||.+. ...++.++|||||||++|+|++ |.+||......... ..........
T Consensus 157 ----~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd05059 157 ----SSQGTKFPVKWAPPEVFD----------YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYR 222 (256)
T ss_pred ----ccCCCCCCccccCHHHhc----------cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence 001112345699999764 3457889999999999999999 69998643322221 1111112223
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...+..+.+++.+||..+|++||++.++++.+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 445678999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=315.65 Aligned_cols=250 Identities=16% Similarity=0.140 Sum_probs=197.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHV 87 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnI 87 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|++.... .......+.+|+++++.++||||
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA----SDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc----CHHHHHHHHHHHHHHHhcCCCCE
Confidence 78999999999999999998753 348999886542 12445678888899999999999
Q ss_pred eEEEEEEEeCCEEEEEecccc-CCHHHHhcCCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcE
Q 000410 88 WAFQFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 155 (1553)
Q Consensus 88 v~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~~-----------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NI 155 (1553)
+++++++..+...+++|||+. ++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999998 69999987654 689999999999999999999999999999999999
Q ss_pred EEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH
Q 000410 156 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235 (1553)
Q Consensus 156 Lv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 235 (1553)
+++.++.++|+|||.++...... .........+++.|+|||.+. ...++.++|||||||++|||+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~el~ 226 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSD-----YYRVQGRAPLPIRWMAWESVL----------LGKFTTKSDVWAFGVTLWEIL 226 (296)
T ss_pred eecCCCceEEccccceeecccCc-----ceeecCcCCCCceecCHHHhh----------cCCCCccchhhhhHHHHHHHH
Confidence 99999999999999887543221 111222334567899999764 335788999999999999999
Q ss_pred c--CCCCCCchHHHHH-H--hcC-----CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 236 L--EVPFFELSHLLAY-R--RGQ-----YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 236 t--g~~pf~~~~~~~~-~--~~~-----~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+ +.+||........ . ... .......+...+.++.++|.+||+.||++||++.|+++.+.
T Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 227 TLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred hcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 8 5778764322211 1 111 11111122344578999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=308.66 Aligned_cols=242 Identities=15% Similarity=0.118 Sum_probs=191.1
Q ss_pred EeeccCcEEEEEEEEC----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 32 VLGGSRFFKSILCKHD----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
.||+|+||.||+|.+. +..+|+|++.... ......+.+.+|+.+++.++||||++++++++. ...++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~ 77 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN---NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELA 77 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC---CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecC
Confidence 6899999999999653 3569999985442 223455678888899999999999999998764 4678999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++..+..++.|++.||+|||++||+||||||.|||++.++.++|+|||.+........ ...
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~----~~~ 153 (257)
T cd05116 78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN----YYK 153 (257)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCC----eee
Confidence 9 69999998777799999999999999999999999999999999999999999999999999876532211 000
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH---H-HHhcCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL---A-YRRGQYDPSQHLE 261 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~---~-~~~~~~~~~~~~~ 261 (1553)
......++..|+|||.+. ...++.++|||||||++|||++ |.+||...... . +..+. ....+
T Consensus 154 ~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~---~~~~~ 220 (257)
T cd05116 154 AKTHGKWPVKWYAPECMN----------YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE---RMECP 220 (257)
T ss_pred ecCCCCCCccccCHhHhc----------cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC---CCCCC
Confidence 111223356799999763 3357789999999999999998 89999643322 2 22222 12244
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...++++.++|.+||+.||++||+++++.+.+.
T Consensus 221 ~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 221 QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 455688999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-31 Score=308.73 Aligned_cols=245 Identities=14% Similarity=0.096 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.++||+|+||.||+|...+ ..|++|.+.... ...+.+.+|..+++.++||||+++++.+...+..|++|
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT------MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc------hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 79999999999999999998765 569999875431 12356778889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++.. ...+++.++..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 157 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE--- 157 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc---
Confidence 9998 699999865 3458889999999999999999999999999999999999999999999999987542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~~ 257 (1553)
........++..|+|||.+. ...++.++|||||||++|+|++ |.+||........ .......
T Consensus 158 ---~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~- 223 (261)
T cd05072 158 ---YTAREGAKFPIKWTAPEAIN----------FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM- 223 (261)
T ss_pred ---eeccCCCccceecCCHHHhc----------cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 00111223456799999764 3457889999999999999998 8999964332221 1222211
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+ .....+..+.+++.+||..||++||+++++++.++
T Consensus 224 ~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 224 P-RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred C-CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 1 22234578999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-31 Score=316.05 Aligned_cols=251 Identities=18% Similarity=0.236 Sum_probs=198.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|.+. +..|++|.+...............+..|.++++.++||||+++++++.+....|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788899999999999999985 36799999976533222234455667788899999999999999999999999999
Q ss_pred eccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.++|.+++.... .+++.++..++.||++||.|||++||+||||||+|||++.++.++|+|||+++........
T Consensus 81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-- 158 (298)
T cd07841 81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK-- 158 (298)
T ss_pred EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc--
Confidence 9999889999998765 7999999999999999999999999999999999999999999999999998765332211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCC--
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDP-- 256 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~-- 256 (1553)
.....+++.|+|||.+.+ ...++.++||||+||++|||++|.++|....... .......+
T Consensus 159 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (298)
T cd07841 159 -----MTHQVVTRWYRAPELLFG---------ARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTE 224 (298)
T ss_pred -----ccccccceeeeCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCch
Confidence 112234677999997742 2356889999999999999999988886433211 11000000
Q ss_pred ----------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 ----------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ----------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........+..+.++|.+||+.||++|||+.|+++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 225 ENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000112235678999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.7e-33 Score=315.50 Aligned_cols=252 Identities=23% Similarity=0.255 Sum_probs=208.4
Q ss_pred cCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 20 DLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 20 ~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
|+..-|++--.+.||+|.||+||-|+|+. +.||||++.|-.-+. ..+..++.|+.||+.+.||.||.+...|++.
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~---kqesqlR~EVaILq~l~HPGiV~le~M~ET~ 635 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT---KQESQLRNEVAILQNLHHPGIVNLECMFETP 635 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCC---chHHHHHHHHHHHHhcCCCCeeEEEEeecCC
Confidence 44555555567899999999999999864 669999998863322 2236789999999999999999999999999
Q ss_pred CEEEEEeccccCCHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC---cEEEeecCccc
Q 000410 98 KAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN---WLYLSDFASFK 172 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l--~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~---~vkL~DFG~a~ 172 (1553)
+.+++|||-+.|+..+.| ++.++|++...+.++.||+.||.|||-+||+|+||||||||+.+.. .+||||||+|+
T Consensus 636 ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 636 ERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred ceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeecccccee
Confidence 999999999999988887 3467899999999999999999999999999999999999998653 79999999999
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-H-HHHH
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-L-LAYR 250 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~-~~~~ 250 (1553)
.+.. ..+..+..|||.|+|||++. ...|+..-|+||+|+|+|--+.|..||+.+. + .++.
T Consensus 716 iIgE--------ksFRrsVVGTPAYLaPEVLr----------nkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQ 777 (888)
T KOG4236|consen 716 IIGE--------KSFRRSVVGTPAYLAPEVLR----------NKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQ 777 (888)
T ss_pred ecch--------hhhhhhhcCCccccCHHHHh----------hccccccccceeeeEEEEEEecccccCCCccchhHHhh
Confidence 7621 22446778999999999876 3457788999999999999999999997543 2 3344
Q ss_pred hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+-.++...+..+++..+||..+|+..-.+|+|.+..|.|
T Consensus 778 NAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 778 NAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred ccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 444443333333445689999999999999999999999998
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.1e-31 Score=307.99 Aligned_cols=252 Identities=20% Similarity=0.212 Sum_probs=198.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|++.+.||+|+||.||++.+.+ ..|++|.+.............+.+.+|+.+++.+.||||+++++++.+. ...|
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 68999999999999999998854 5699998865432223334456788888999999999999999988653 5688
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
++|||++ ++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+.........
T Consensus 83 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 162 (265)
T cd06652 83 IFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS 162 (265)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc
Confidence 9999998 599999987777899999999999999999999999999999999999999999999999988754321111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCC-CCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYD-PSQ 258 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~-~~~ 258 (1553)
... .....++..|+|||.+. +..++.++|||||||++|||++|++||.... ...+...... ..+
T Consensus 163 ~~~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 228 (265)
T cd06652 163 GTG----MKSVTGTPYWMSPEVIS----------GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP 228 (265)
T ss_pred ccc----cccCCCCccccChhhhc----------CCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCC
Confidence 111 12234678899999764 2356889999999999999999999986432 2222222222 122
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..+.++|.+|+. +|++||+++++++|
T Consensus 229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 3444456789999999995 99999999999988
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=340.61 Aligned_cols=257 Identities=15% Similarity=0.171 Sum_probs=196.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+.. +.||+|++.... ...+...+++.+|+++++.++||||+++++++.+++..|++
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l--~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDL--SENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccc--ccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 79999999999999999999863 679999986532 22344566788899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 104 RQYFF-NSLRDRLSTP-----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
|||++ |+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 99999 5999988531 23556778899999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCc-----------ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC
Q 000410 172 KPTYIPYDDPSDF-----------SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 240 (1553)
Q Consensus 172 ~~~~~~~~~~~~~-----------~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 240 (1553)
+......+..... ........||+.|+|||++. +..++.++||||+||++|||++|.+|
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~----------g~~~S~kSDIWSLGVILyELLTG~~P 230 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL----------GVPASESTDIYALGVILYQMLTLSFP 230 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc----------CCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 7652211111000 00112345899999999764 34678899999999999999999999
Q ss_pred CCchHHHHHHhc--CCCCCCC-CCCCCCHHHHHHHHHhcccCcCCCCCH-HHHHHhhh
Q 000410 241 FELSHLLAYRRG--QYDPSQH-LEKIPDSGIRKMILHMIQLEPELRFSA-ESYLQNYA 294 (1553)
Q Consensus 241 f~~~~~~~~~~~--~~~~~~~-~~~~~~~~l~~LI~~mL~~dP~~Rpsa-~elL~~~~ 294 (1553)
|........... ...+... .....++.+.+++.+||+.||++||+. +++++.+.
T Consensus 231 F~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 231 YRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred CCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 975443322111 1111111 112335689999999999999999865 44544443
|
|
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.9e-31 Score=316.48 Aligned_cols=252 Identities=16% Similarity=0.157 Sum_probs=196.5
Q ss_pred cceEEEEEeeccCcEEEEEEEEC---------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD---------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQ 94 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~---------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~ 94 (1553)
.+|.+.+.||+|+||.||+|++. ...||+|++.... .....+.+.+|+.+++.+ +||||+++++++
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc----chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 38999999999999999999752 1358999875431 123345677888899998 799999999999
Q ss_pred EeCCEEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEE
Q 000410 95 ETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 157 (1553)
Q Consensus 95 ~~~~~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv 157 (1553)
......|++|||+. |+|.+++..+ ..++..++..++.||+.||.|||++||+||||||+|||+
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili 170 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV 170 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE
Confidence 99999999999999 6999998653 247788899999999999999999999999999999999
Q ss_pred ecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-
Q 000410 158 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 236 (1553)
Q Consensus 158 ~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt- 236 (1553)
+.++.+||+|||.++....... ........+++.|+|||.+. +..++.++|||||||++|+|++
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~ 235 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDY-----YKKTTNGRLPVKWMAPEALF----------DRVYTHQSDVWSFGVLMWEIFTL 235 (304)
T ss_pred cCCCcEEECCCccceecccccc-----cccccCCCCCceeeCchhhc----------cCCCCchhhHHHHHHHHHHHHcC
Confidence 9999999999999875522111 11112233456799999764 3457889999999999999998
Q ss_pred CCCCCCchHHHHHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 237 EVPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 237 g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
|.+||.............. .....+...+..+++||.+||..+|++||++.|+++.++.
T Consensus 236 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 236 GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred CCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 6888875544333221111 1112233456789999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-31 Score=311.88 Aligned_cols=249 Identities=14% Similarity=0.111 Sum_probs=192.7
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--Cc----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EG----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
.+|++.+.||.|+||.||+|... +. .+++|.+... .......++..|..+++.+.||||+++++++.. .
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~ 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR----SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-A 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc----cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-C
Confidence 37889999999999999999874 23 2566665322 223334566677778899999999999998754 4
Q ss_pred EEEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 99 AAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
..++++||++ |+|.+++.. .+.+++..+..|+.||+.||.|||++|++||||||+|||++.++.+||+|||.++....
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 5788999998 799999975 45689999999999999999999999999999999999999999999999999875421
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HHhc
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YRRG 252 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~~~ 252 (1553)
. ..........++..|+|||.+. ...++.++|||||||++|||++ |.+||....... ....
T Consensus 162 ~-----~~~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 226 (279)
T cd05111 162 D-----DKKYFYSEHKTPIKWMALESIL----------FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK 226 (279)
T ss_pred C-----CcccccCCCCCcccccCHHHhc----------cCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence 1 1112223445667899999764 3467899999999999999998 898986543322 2221
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.. ....+...+..+.+++.+||..||++||++.|+++.+..
T Consensus 227 ~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~ 267 (279)
T cd05111 227 GE--RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTR 267 (279)
T ss_pred CC--cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 11 112233456789999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=4e-31 Score=315.52 Aligned_cols=255 Identities=22% Similarity=0.229 Sum_probs=199.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|.+.+.. .......+.+..|.++++.++||||+++++.+......|+|
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKE--MIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccc--cchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence 68999999999999999999864 679999997652 12223456688888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||+. ++|.+++... ..+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||++.........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 99998 5999998754 46899999999999999999999999999999999999999999999999987654221110
Q ss_pred CCC----------------------cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCC
Q 000410 181 PSD----------------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 238 (1553)
Q Consensus 181 ~~~----------------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 238 (1553)
... .........|+..|+|||.+. +..++.++|||||||++|+|++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----------~~~~~~~~Di~slG~ll~~l~~g~ 229 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS----------GDGHGSAVDWWTLGILLYEMLYGT 229 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc----------CCCCCchHHHHHHHHHHHHHhhCC
Confidence 000 000111234678899999764 335688999999999999999999
Q ss_pred CCCCchHHHHHHhcCCCCCCCCCC--CCCHHHHHHHHHhcccCcCCCCC----HHHHHHh
Q 000410 239 PFFELSHLLAYRRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFS----AESYLQN 292 (1553)
Q Consensus 239 ~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~LI~~mL~~dP~~Rps----a~elL~~ 292 (1553)
.||...+..............++. ..++.++++|.+||+.||++||+ ++|+++|
T Consensus 230 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 230 TPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred CCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 999654432211111111111111 24678999999999999999999 9999988
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.3e-31 Score=309.40 Aligned_cols=240 Identities=18% Similarity=0.139 Sum_probs=191.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. ++.||+|++.+.. .......+.+|.++++.++||||+++++.+..++..++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI----TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISIC 77 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC----ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEE
Confidence 5788899999999999999885 3669999986541 233445678888999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ +|..+ ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~---- 149 (279)
T cd06619 78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI---- 149 (279)
T ss_pred EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc----
Confidence 999995 66544 236888999999999999999999999999999999999999999999999987542111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-------HHHHhcC--
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-------LAYRRGQ-- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-------~~~~~~~-- 253 (1553)
.....++..|+|||.+. +..++.++|+|||||++|+|++|..||..... .......
T Consensus 150 -----~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 214 (279)
T cd06619 150 -----AKTYVGTNAYMAPERIS----------GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD 214 (279)
T ss_pred -----ccCCCCChhhcCceeec----------CCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc
Confidence 12235678899999764 34578899999999999999999988853210 1111111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...........++.++++|.+||+.||++||+++++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 215 EDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111111223356789999999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-31 Score=310.70 Aligned_cols=246 Identities=17% Similarity=0.195 Sum_probs=195.2
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|+..+.||+|+||+||++.+. ++.||+|++.+... ........+.+|+++++.++|+||+++++.+..++..|++|
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI--KKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh--hhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence 678899999999999999986 36799999865411 11223345667889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--- 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--- 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC---
Confidence 9999 5898887543 359999999999999999999999999999999999999999999999999886431110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~ 257 (1553)
......|+..|+|||.+. +..++.++|+||+||++|+|++|.+||..... ...........
T Consensus 157 -----~~~~~~g~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05632 157 -----SIRGRVGTVGYMAPEVLN----------NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE 221 (285)
T ss_pred -----cccCCCCCcCccChHHhc----------CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc
Confidence 112345788999999764 34578899999999999999999999965322 12222222222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
.......++.+.+|+.+||+.||++||+ ++++++|
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 222 EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 2334445678999999999999999999 7788877
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-31 Score=310.01 Aligned_cols=247 Identities=18% Similarity=0.243 Sum_probs=202.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|++. +..|++|++.+... ......+.+.+|.+++++++||||++++++++++...|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC--VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh--cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEE
Confidence 4889999999999999999986 46799999976421 1223456788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||+. ++|.+++.....+++.++..++.||++||.|||++|++|+||||+||++++++.++|+|||.+.......
T Consensus 79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 154 (258)
T cd05578 79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---- 154 (258)
T ss_pred EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc----
Confidence 99998 5999999887779999999999999999999999999999999999999999999999999876542211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHHHHhcCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLAYRRGQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~~~~~~~~~~~~ 259 (1553)
......++..|+|||.+. ...++.++|+||+||++|+|++|..||.... ...+..........
T Consensus 155 ----~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (258)
T cd05578 155 ----LTTSTSGTPGYMAPEVLC----------RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVL 220 (258)
T ss_pred ----cccccCCChhhcCHHHHc----------ccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccccc
Confidence 112334677899999764 2347889999999999999999999987543 23332222213333
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCH--HHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSA--ESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa--~elL~~ 292 (1553)
.+...+..+.++|.+||+.||.+||++ .|+++|
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 221 YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred CcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence 444556799999999999999999999 888876
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.3e-32 Score=332.99 Aligned_cols=256 Identities=20% Similarity=0.233 Sum_probs=206.9
Q ss_pred cccccCCCccceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCee
Q 000410 16 YYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVW 88 (1553)
Q Consensus 16 ~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv 88 (1553)
.+..+++.. +.++.+.||+|+||+||+|+..+ ..||||.++.. ...+..++|++|++++..++|||||
T Consensus 478 ~~~~~i~r~-~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~----a~~~~~~dF~REaeLla~l~H~nIV 552 (774)
T KOG1026|consen 478 LKVLEIPRS-DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK----AENQARQDFRREAELLAELQHPNIV 552 (774)
T ss_pred cceeEechh-heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc----ccHHHHHHHHHHHHHHHhccCCCeE
Confidence 344455543 78899999999999999998754 34999999654 3355778899999999999999999
Q ss_pred EEEEEEEeCCEEEEEecccc-CCHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000410 89 AFQFWQETDKAAYLLRQYFF-NSLRDRLSTP--------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 153 (1553)
Q Consensus 89 ~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~--------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~ 153 (1553)
++++++..++..|||+|||. |||.++|..+ +.|+..+.+.|+.||+.|+.||-++.+|||||-..
T Consensus 553 rLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATR 632 (774)
T KOG1026|consen 553 RLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATR 632 (774)
T ss_pred EEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhh
Confidence 99999999999999999999 9999999432 34889999999999999999999999999999999
Q ss_pred cEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHH
Q 000410 154 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233 (1553)
Q Consensus 154 NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 233 (1553)
|+||.+.-.|||+|||+++..|..+ +...-....-...|||||-+. .++++.++||||+||+|||
T Consensus 633 NCLVge~l~VKIsDfGLsRdiYssD-----YYk~~~~t~lPIRWMppEsIl----------y~kFTteSDVWs~GVvLWE 697 (774)
T KOG1026|consen 633 NCLVGENLVVKISDFGLSRDIYSSD-----YYKVRGNTLLPIRWMPPESIL----------YGKFTTESDVWSFGVVLWE 697 (774)
T ss_pred hceeccceEEEecccccchhhhhhh-----hhcccCCceeeeecCCHHHhh----------cCcccchhhhhhhhhhhhh
Confidence 9999999999999999999876432 111111222246799999765 5689999999999999999
Q ss_pred HHc-CCCCC-CchHHH---HHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 234 LFL-EVPFF-ELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 234 Llt-g~~pf-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+|+ |..|| ..++.+ .++++.. ..-+...+.++.+|+..||+.+|.+||++.||-..++
T Consensus 698 IFsyG~QPy~glSn~EVIe~i~~g~l---L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 698 IFSYGKQPYYGLSNQEVIECIRAGQL---LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred hhccccCcccccchHHHHHHHHcCCc---ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 998 56555 444332 2334443 2245556689999999999999999999999876654
|
|
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-31 Score=316.05 Aligned_cols=249 Identities=18% Similarity=0.164 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC---------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD---------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~---------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~ 95 (1553)
+|++.+.||+|+||.||+|++. ...+|+|++.... . ......+..|+.+++.+ +||||+++++++.
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~---~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA---T-DKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC---C-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 7999999999999999999763 2358999876432 1 22344567788889888 6999999999999
Q ss_pred eCCEEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
.+...|++|||+. |+|.+++... ..+++.++..++.||+.||.|||++||+||||||+|||++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT 168 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc
Confidence 9999999999999 6999999653 3488899999999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 237 (1553)
.++.+||+|||.++....... ........++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~el~~~g 233 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDY-----YKKTSNGRLPVKWMAPEALF----------DRVYTHQSDVWSFGILMWEIFTLG 233 (314)
T ss_pred CCCcEEEcccccccccccccc-----ccccccCCCCccccCHHHHc----------cCCcCccchhhHHHHHHHHHHhCC
Confidence 999999999999875421110 00011122345799999764 3457889999999999999999 7
Q ss_pred CCCCCchHHHH---HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 238 VPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 238 ~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..||....... ....... ...+...+..++++|.+||..||++||++.++++.+..
T Consensus 234 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 292 (314)
T cd05099 234 GSPYPGIPVEELFKLLREGHR--MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK 292 (314)
T ss_pred CCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 88887543322 2222111 12233445689999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.9e-31 Score=288.93 Aligned_cols=307 Identities=19% Similarity=0.260 Sum_probs=262.5
Q ss_pred CCCcccCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcE
Q 000410 1122 DSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1122 ~~~W~p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~ 1201 (1553)
+..|-|+-.++..+.+|+.+|+.+-|+|+-..+++||+|+++|+||..+++ ....+.+|...+.++.|...|..
T Consensus 91 ~~~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~------~e~~LrGHt~sv~di~~~a~Gk~ 164 (406)
T KOG0295|consen 91 PALWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGE------LERSLRGHTDSVFDISFDASGKY 164 (406)
T ss_pred hhhcCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchh------hhhhhhccccceeEEEEecCccE
Confidence 567999989999999999999999999999999999999999999999887 34567789988999999999999
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+|+|+.|-.+++||.+.. ..+++...+|...|.++.|-|. |.++++++.|.+|+.||+.++-++
T Consensus 165 l~tcSsDl~~~LWd~~~~-------------~~c~ks~~gh~h~vS~V~f~P~---gd~ilS~srD~tik~We~~tg~cv 228 (406)
T KOG0295|consen 165 LATCSSDLSAKLWDFDTF-------------FRCIKSLIGHEHGVSSVFFLPL---GDHILSCSRDNTIKAWECDTGYCV 228 (406)
T ss_pred EEecCCccchhheeHHHH-------------HHHHHHhcCcccceeeEEEEec---CCeeeecccccceeEEecccceeE
Confidence 999999999999999731 1234445677888999999998 679999999999999999999999
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCcc-----c-cCCC
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAV-----S-TTAR 1355 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~-----~-s~~~ 1355 (1553)
+++.. |..+|..+....||..+++|+.|.+|++|-+.++.+...+.. |.-+|.++.| .|....-. . ...+
T Consensus 229 ~t~~~--h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~-hEh~vEci~w-ap~~~~~~i~~at~~~~~~ 304 (406)
T KOG0295|consen 229 KTFPG--HSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELRE-HEHPVECIAW-APESSYPSISEATGSTNGG 304 (406)
T ss_pred EeccC--chHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhc-cccceEEEEe-cccccCcchhhccCCCCCc
Confidence 99987 788999999999999999999999999999999977666654 5668999988 55433111 1 1234
Q ss_pred CEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCc
Q 000410 1356 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1356 ~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
.++.+++.|+.|++||+.+|.|+.++.++ ..+|
T Consensus 305 ~~l~s~SrDktIk~wdv~tg~cL~tL~gh-----------------------------------------------dnwV 337 (406)
T KOG0295|consen 305 QVLGSGSRDKTIKIWDVSTGMCLFTLVGH-----------------------------------------------DNWV 337 (406)
T ss_pred cEEEeecccceEEEEeccCCeEEEEEecc-----------------------------------------------ccee
Confidence 68999999999999999999999988743 3389
Q ss_pred EEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhh
Q 000410 1436 RSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1514 (1553)
Q Consensus 1436 ~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1514 (1553)
+.++|+|.| +|+++.+|+++|+||+++..+...+.
T Consensus 338 r~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~-------------------------------------------- 373 (406)
T KOG0295|consen 338 RGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE-------------------------------------------- 373 (406)
T ss_pred eeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC--------------------------------------------
Confidence 999999999 67799999999999998765544222
Q ss_pred hhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1515 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1515 ~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|...|+++ .|+.+..|++||+-|-.+|||.
T Consensus 374 -------ah~hfvt~l-Dfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 374 -------AHEHFVTSL-DFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred -------CCcceeEEE-ecCCCCceEEeccccceeeeee
Confidence 288889999 6888899999999999999994
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-31 Score=312.05 Aligned_cols=249 Identities=20% Similarity=0.228 Sum_probs=196.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. +..|++|++...... ......+.+|+.+++.++||||+++++++..+...|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v 77 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE---GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLV 77 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc---chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEE
Confidence 4889999999999999999985 467999998765211 23345677888999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.++|.+++.. ...+++.+++.++.||+.||+|||++|++||||||+||+++.++.++|+|||.+........
T Consensus 78 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 78 MEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred ecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 99997799999864 45689999999999999999999999999999999999999999999999998875532211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh-------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR------- 251 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~------- 251 (1553)
.......++..|+|||.+.+ ...++.++||||+||++|||++|.++|....... ...
T Consensus 155 ---~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07832 155 ---RLYSHQVATRWYRAPELLYG---------ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNE 222 (286)
T ss_pred ---CccccccCcccccCceeeec---------cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCCh
Confidence 11223457888999997642 2346889999999999999999988886432111 000
Q ss_pred --------------cCCCCCC-----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 --------------GQYDPSQ-----HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 --------------~~~~~~~-----~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.... ......+..+.++|.+||..||++||+++++++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 223 ETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred HHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 0111234789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-31 Score=308.33 Aligned_cols=240 Identities=22% Similarity=0.265 Sum_probs=195.2
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||.|+||.||+|++. ++.+++|++.+.. .......+.+.+|+.+++.++||||+++++++.++...|++|||++ +
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRH--IVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhc--chhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCC
Confidence 699999999999997 5779999997642 1223445678889999999999999999999999999999999998 6
Q ss_pred CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeee
Q 000410 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189 (1553)
Q Consensus 110 sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 189 (1553)
+|.+++.....+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.++....... ..
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~--------~~ 150 (262)
T cd05572 79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK--------TW 150 (262)
T ss_pred cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc--------cc
Confidence 9999998877799999999999999999999999999999999999999999999999998875532110 11
Q ss_pred cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHH-HHhcCC-CCCCCCCCCCC
Q 000410 190 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLA-YRRGQY-DPSQHLEKIPD 265 (1553)
Q Consensus 190 ~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~-~~~~~~-~~~~~~~~~~~ 265 (1553)
...+++.|+|||.+. ...++.++|+||+||++|+|++|.+||.... ... +..... ......+...+
T Consensus 151 ~~~~~~~~~~PE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (262)
T cd05572 151 TFCGTPEYVAPEIIL----------NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYID 220 (262)
T ss_pred cccCCcCccChhHhc----------CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccC
Confidence 224577899999764 3356789999999999999999999996554 222 221110 11222333346
Q ss_pred HHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 266 SGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 266 ~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
+.++++|.+||+.||++||+ ++|+++|
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 78999999999999999999 9999998
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-31 Score=308.61 Aligned_cols=254 Identities=20% Similarity=0.228 Sum_probs=201.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCC-cCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDY-IDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~-~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|+..+.||+|+||.||+++.. +..||+|++...... .......+.+..|+.+++.++||||+++++++.+....++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4778899999999999999874 467999998754222 2233456778899999999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCccccccCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~~~ 180 (1553)
|+||+. ++|.+++...+.+++..+..++.||+.||.|||++|++||||||+||+++.++ .++|+|||.+.........
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 999999 59999998777799999999999999999999999999999999999998776 6999999998655322111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHh-cCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRR-GQYD 255 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~-~~~~ 255 (1553)
. ........++..|+|||.+. +..++.++|+||+||++|+|++|.+||..... ..+.+ ....
T Consensus 161 ~---~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (268)
T cd06630 161 A---GEFQGQLLGTIAFMAPEVLR----------GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT 227 (268)
T ss_pred C---CccccccccccceeCHhHhc----------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccC
Confidence 1 11122334678899999764 23567899999999999999999999864321 11111 1111
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+...++.+.+++.+||..||++||++.++++|
T Consensus 228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 2233444556789999999999999999999999988
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.9e-31 Score=311.89 Aligned_cols=252 Identities=19% Similarity=0.157 Sum_probs=197.5
Q ss_pred ccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
...|++.+.||.|+||.||+|++.. ..+++|++... .....+.+.+|+.+++.++||||+++++.+..+...|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEE
Confidence 3468999999999999999999864 56999998653 1234456777888999999999999999999999999
Q ss_pred EEeccccC-CHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 102 LLRQYFFN-SLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 102 lV~E~~~g-sL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
+||||++| +|..++.+ ...+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 99999995 78777654 45689999999999999999999999999999999999999999999999998764321111
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-HHhcC--CCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRRGQ--YDP 256 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~~~--~~~ 256 (1553)
......+++.|+|||.+.... .....++.++|+|||||++|||++|.+||....... +.+.. ..+
T Consensus 166 -------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 233 (292)
T cd06644 166 -------RRDSFIGTPYWMAPEVVMCET-----MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP 233 (292)
T ss_pred -------ccceecCCccccCceeecccc-----ccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc
Confidence 012234577899999875321 123457889999999999999999999986433222 11111 111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+...+..+.++|.+||+.||++||+++++++|
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 234 TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 112233445789999999999999999999999988
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-31 Score=306.11 Aligned_cols=250 Identities=20% Similarity=0.224 Sum_probs=203.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+..+.||+|+||+||+|... ++.|++|++..........+..+.+.+|..+++.++||||+++++++..+...|++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3677899999999999999885 46799999876543333455567788899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---- 156 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc----
Confidence 99998 5999999877779999999999999999999999999999999999999999999999999876542211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-H-HhcCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-Y-RRGQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~-~~~~~~~~~~~ 260 (1553)
......++..|+|||.+.. ...++.++|+||+||++|+|++|.+||....... . ...........
T Consensus 157 ----~~~~~~~~~~y~~pe~~~~---------~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 223 (258)
T cd06632 157 ----FAKSFKGSPYWMAPEVIAQ---------QGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPI 223 (258)
T ss_pred ----cccccCCCcceeCHHHhcC---------CCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCc
Confidence 1123456788999997642 1137889999999999999999999996443211 1 11111222234
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+...++.+++++.+||+.+|++||+++++++|
T Consensus 224 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 224 PDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 45567889999999999999999999999987
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=308.84 Aligned_cols=251 Identities=14% Similarity=0.073 Sum_probs=192.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE--
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA-- 99 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~-- 99 (1553)
|++.+.||+|+||.||+|.... ..||+|++..... .......+..|.+.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 77 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH---TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQ 77 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccc
Confidence 4678999999999999998743 4599999865321 12334567788899999999999999998765443
Q ss_pred ----EEEEecccc-CCHHHHhcC------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 100 ----AYLLRQYFF-NSLRDRLST------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 100 ----~~lV~E~~~-gsL~d~l~~------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
.+++|||+. |+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++++++.+||+||
T Consensus 78 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 78 KIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred cCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCc
Confidence 799999999 699888733 235899999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|.++........ ........+..|+|||.+. ...++.++|||||||++|||++ |.+||......
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~ 222 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLA----------DRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH 222 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcc----------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 998765322110 0011122356799999653 3467889999999999999999 78998654332
Q ss_pred HHHhcCC-CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 248 AYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 248 ~~~~~~~-~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
....... ......+...+..+.+++.+||+.||++||++.|+++++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 223 EIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 2211111 11222344556789999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-31 Score=321.55 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=197.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe----CCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----DKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~----~~~ 99 (1553)
+|++.+.||.|+||.||+|.+. +..||+|++.+.... ......+.+|..+++.++||||+++++++.. ...
T Consensus 6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV---PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc---ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 7899999999999999999875 467999998654221 1233456678899999999999999988753 356
Q ss_pred EEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 100 AYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 100 ~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
.|+||||+.++|.+.+.....+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 83 VYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred EEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 89999999999999998777799999999999999999999999999999999999999999999999999875533221
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----Hh--c-
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RR--G- 252 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~--~- 252 (1553)
. ...+.....++..|+|||.+.. ...++.++||||+||++|||++|++||........ .. +
T Consensus 163 ~---~~~~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~ 230 (334)
T cd07855 163 E---HKYFMTEYVATRWYRAPELLLS---------LPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGS 230 (334)
T ss_pred C---CCcccccccccccccChHHhcC---------CcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCC
Confidence 1 1112233457888999997642 23578899999999999999999999965432110 00 0
Q ss_pred -------------------CCCCCCC-----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 -------------------QYDPSQH-----LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 -------------------~~~~~~~-----~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....... .....++.++++|.+||+.||++||++++++.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 231 PSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred ChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0010000 112246789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-31 Score=313.05 Aligned_cols=249 Identities=20% Similarity=0.214 Sum_probs=195.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||+|.... ..+++|++.... . ......+..|+.+++.++||||+++++.+..+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---S-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC---C-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC
Confidence 47888999999999999998742 358888875432 1 233456778889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 153 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~ 153 (1553)
..|+++||+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ 156 (290)
T cd05045 77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAAR 156 (290)
T ss_pred CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhh
Confidence 9999999999 6999987532 23788899999999999999999999999999999
Q ss_pred cEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHH
Q 000410 154 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233 (1553)
Q Consensus 154 NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 233 (1553)
|||+++++.++|+|||+++........ . ......++..|+|||.+. +..++.++|||||||++||
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~----~-~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~~l~e 221 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSY----V-KRSKGRIPVKWMAIESLF----------DHIYTTQSDVWSFGVLLWE 221 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccch----h-cccCCCCCccccCHHHHc----------cCCcchHhHHHHHHHHHHH
Confidence 999999999999999998754221110 0 011223456799999764 3457889999999999999
Q ss_pred HHc-CCCCCCchHHHH---HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 234 LFL-EVPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 234 Llt-g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
|++ |.+||....... .....+.. ..+...+..+++++.+||+.||++||++.++++.++.
T Consensus 222 l~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 222 IVTLGGNPYPGIAPERLFNLLKTGYRM--ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred HHhcCCCCCCCCCHHHHHHHHhCCCCC--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 998 899997544333 22222221 2234456789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-31 Score=303.88 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=203.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+|+.||++.+. ++.|++|++...... ....+.+..|..+++.++||||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND---PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIF 77 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc---hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEE
Confidence 4888999999999999999875 467999998765321 45667788999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++...+.+++.++..++.|++.||.|||++||+||||||+||+++.++.+||+|||.+..........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 99999 6999999887779999999999999999999999999999999999999999999999999987653322211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-HH--HHHHhcCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-HL--LAYRRGQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-~~--~~~~~~~~~~~~~ 259 (1553)
...+....++..|+|||.+.... ...++.++||||+||++|+|++|.+||... .. ..+.... .....
T Consensus 157 --~~~~~~~~~~~~~~~PE~~~~~~-------~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~ 226 (264)
T cd06626 157 --GEEVQSLAGTPAYMAPEVITGGK-------GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPP 226 (264)
T ss_pred --cccccCCcCCcCccChhhccCCC-------CCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCC
Confidence 11123345678899999875221 134788999999999999999999999633 11 1122121 22222
Q ss_pred CCCCC--CHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIP--DSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~--~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++... ++.+.++|.+||+.||.+||++++++.|
T Consensus 227 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 227 IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 33332 6789999999999999999999999987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=305.59 Aligned_cols=244 Identities=16% Similarity=0.119 Sum_probs=191.2
Q ss_pred EEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|.+.. ..+|+|.+..... ....+.+.+|..+++.+.||||++++++++. ...++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e 75 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI----AAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVME 75 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccc----hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEE
Confidence 479999999999997632 4699999865421 1445667888899999999999999998764 46799999
Q ss_pred ccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCc
Q 000410 106 YFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
|+. |+|.+++...+.+++..+..++.|++.||+|||.+|++||||||+|||++.++.+||+|||.++....... .
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~----~ 151 (257)
T cd05060 76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD----Y 151 (257)
T ss_pred eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc----c
Confidence 998 69999998877899999999999999999999999999999999999999999999999999875532111 0
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HHhcCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YRRGQYDPSQHL 260 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~~~~~~~~~~~ 260 (1553)
........++..|+|||.+. ...++.++|||||||++|+|++ |.+||....... ...... ....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~--~~~~ 219 (257)
T cd05060 152 YRATTAGRWPLKWYAPECIN----------YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE--RLPR 219 (257)
T ss_pred cccccCccccccccCHHHhc----------CCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC--cCCC
Confidence 00011112345799999764 3457889999999999999998 899996543222 222111 1123
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
+...+..++++|.+||..||++||++.++++.++.
T Consensus 220 ~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 220 PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 33445789999999999999999999999988654
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-34 Score=304.88 Aligned_cols=244 Identities=18% Similarity=0.109 Sum_probs=200.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
-|.++++||+|+||.||+|.|++ ..+|||.+... .-.+++.+|+.++++++.|+||+||+.|.....+|+|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-------chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEee
Confidence 35677899999999999999975 56999988443 3345677888999999999999999999888999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||+ |++.|.++- +..|++.++..+++.-++||+|||...-+|||||..|||++.+|.+||+|||.+....
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT------ 180 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT------ 180 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhh------
Confidence 99999 899999975 4569999999999999999999999999999999999999999999999999986542
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYDPSQHL 260 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~~~~~~ 260 (1553)
+......+..|||.|||||++.. -.|+.++||||||++..||..|+|||..-. +..+.-.-..+++.+
T Consensus 181 -DTMAKRNTVIGTPFWMAPEVI~E----------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF 249 (502)
T KOG0574|consen 181 -DTMAKRNTVIGTPFWMAPEVIEE----------IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTF 249 (502)
T ss_pred -hhHHhhCccccCcccccHHHHHH----------hccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCC
Confidence 22223457789999999998753 357789999999999999999999996322 111111112233322
Q ss_pred --CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 --EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 --~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...+.++.++|++||.++|++|-||.++++|-
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 334567899999999999999999999999983
|
|
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=313.55 Aligned_cols=250 Identities=17% Similarity=0.187 Sum_probs=194.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWA 89 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~ 89 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|++.... .......+.+|+++++.++||||++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV----TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 79999999999999999998642 248999885431 1334456888999999999999999
Q ss_pred EEEEEEeCCEEEEEecccc-CCHHHHhcCCC------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEE
Q 000410 90 FQFWQETDKAAYLLRQYFF-NSLRDRLSTPP------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 156 (1553)
Q Consensus 90 ~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~~------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NIL 156 (1553)
+++++..+...|+||||+. ++|.+++.... .+++.++..++.|++.||+|||++|++||||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999 59999885432 3678899999999999999999999999999999999
Q ss_pred EecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc
Q 000410 157 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 236 (1553)
Q Consensus 157 v~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 236 (1553)
++.++.+||+|||++...... ..........++..|+|||.+. ...++.++|||||||++|+|++
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlG~~l~el~~ 226 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSG-----DYYRIQGRAVLPIRWMAWESIL----------LGKFTTASDVWAFGVTLWEMFT 226 (295)
T ss_pred EcCCCcEEecccccccccccC-----cceeccCcCcCceeecChhhhc----------cCCcCchhhHHHHHHHHHHHHH
Confidence 999999999999988754211 1111112233466899999764 3457899999999999999998
Q ss_pred --CCCCCCchHHHHHHh--------cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 237 --EVPFFELSHLLAYRR--------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 237 --g~~pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+..||.......... .........+...++.+.+||.+||+.||++||+++++++.++
T Consensus 227 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 227 LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 577886432222111 1111111223344678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-31 Score=313.53 Aligned_cols=248 Identities=16% Similarity=0.177 Sum_probs=196.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|.+.+.||+|+||+||++.+. ...||+|++.+.. .....+.+.+|..+++++ +||||+++++++...
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA----HSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC----ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 7899999999999999999752 1358999886442 123345678888999999 799999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
+..|++|||+. |+|.+++... ..+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||.++..
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 99999999999 6999999653 23899999999999999999999999999999999999999999999999998754
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH----HHH
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL----LAY 249 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~----~~~ 249 (1553)
.... . ........++..|+|||.+. ...++.++||||+||++|||++ |.+||..... ...
T Consensus 192 ~~~~----~-~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~ 256 (302)
T cd05055 192 MNDS----N-YVVKGNARLPVKWMAPESIF----------NCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL 256 (302)
T ss_pred cCCC----c-eeecCCCCcccccCCHhhhc----------cCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH
Confidence 2211 0 11122334567899999764 3457889999999999999998 8888864322 122
Q ss_pred HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 250 RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... ...+...++.+.+++.+||..+|++||++.|+++.+.
T Consensus 257 ~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 257 IKEGYR--MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred HHcCCc--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 222221 1223345678999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=308.33 Aligned_cols=249 Identities=18% Similarity=0.164 Sum_probs=190.1
Q ss_pred eEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CC
Q 000410 27 LVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DK 98 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~ 98 (1553)
|++.+.||+|+||+||++... +..||+|++.... .......+.+|+++++.++||||+++++++.. ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC----GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 488999999999999887532 3569999986542 12344567788899999999999999998765 34
Q ss_pred EEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
..|++|||+. ++|.+++.... +++.++..++.|++.||.|||++||+||||||+|||+++++.++|+|||+++.....
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~~-l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKHK-LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 6899999999 59999987654 899999999999999999999999999999999999999999999999998755221
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhcCC-
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRGQY- 254 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~~~- 254 (1553)
.. .........++..|+|||.+. ...++.++|||||||++|||++|..||.... .........
T Consensus 161 ~~----~~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 161 HE----YYRVREDGDSPVFWYAVECLK----------ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred ch----hhccCCCCCCCceeeCHhHhc----------ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 11 000111223456799999764 3457889999999999999999987875321 111110000
Q ss_pred -------------CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 255 -------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 255 -------------~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
......+...+..+++++.+||+.||++||+++++++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 227 QMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred ccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 0011123344578999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=309.68 Aligned_cols=250 Identities=17% Similarity=0.176 Sum_probs=193.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE-----eC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE-----TD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~-----~~ 97 (1553)
+|++.+.||+|+||.||+|.+.. ..+++|++.... .....+..|..+++.+ +||||+++++++. .+
T Consensus 19 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 92 (286)
T cd06638 19 TWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH------DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNG 92 (286)
T ss_pred ceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc------chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCC
Confidence 79999999999999999998854 569999875421 1224566777888888 6999999999873 45
Q ss_pred CEEEEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
...|+||||++ ++|.+++. ....+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++.
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 172 (286)
T cd06638 93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSA 172 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCcee
Confidence 67999999998 59988764 33568899999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR 251 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~ 251 (1553)
...... .......|++.|+|||.+.... .....++.++||||+||++|||++|.+||..... ..+..
T Consensus 173 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~ 240 (286)
T cd06638 173 QLTSTR-------LRRNTSVGTPFWMAPEVIACEQ-----QLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK 240 (286)
T ss_pred ecccCC-------CccccccCCCcccChhhhchhh-----hccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh
Confidence 542111 0112345788999999875321 1234578899999999999999999888864332 22222
Q ss_pred cCCC--CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 252 GQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 252 ~~~~--~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.... +....+...+..+.++|.+||+.||++||++.|+++|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 241 IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1111 11123344567899999999999999999999999984
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=321.24 Aligned_cols=244 Identities=20% Similarity=0.274 Sum_probs=191.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.+... .......+.+|+.+++.++||||+++++++...
T Consensus 17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ---NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc---ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 7999999999999999999985 46799999865421 122334566788999999999999999988644
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+||||+.++|.+.+... +++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 171 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 171 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence 357999999999999998755 899999999999999999999999999999999999999999999999998754221
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----H----
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----Y---- 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~---- 249 (1553)
. ......++..|+|||.+. +..++.++|||||||++|+|++|+.||...+... +
T Consensus 172 ~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 233 (353)
T cd07850 172 F--------MMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQL 233 (353)
T ss_pred C--------CCCCCcccccccCHHHHh----------CCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhc
Confidence 1 112234678899999774 3467889999999999999999999996432110 0
Q ss_pred ------------------HhcC--CCCC---CCC------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 ------------------RRGQ--YDPS---QHL------------EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ------------------~~~~--~~~~---~~~------------~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... .... ... ....++.++++|.+||+.||++|||+.|+|+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 234 GTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred CCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 0000 000 11234568999999999999999999999998
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=308.27 Aligned_cols=250 Identities=14% Similarity=0.079 Sum_probs=189.2
Q ss_pred EEEEEeeccCcEEEEEEEECCc----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 28 VLKEVLGGSRFFKSILCKHDEG----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 28 ~~~~~LG~G~fg~V~~a~~~~~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
.+++.||+|+||.||+|..... .+|+|.+.... ......+.+.+|..+++.++||||+++++++...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI---CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCC
Confidence 4678999999999999987542 48899875431 1233345677888999999999999999876322
Q ss_pred CEEEEEecccc-CCHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 98 KAAYLLRQYFF-NSLRDRLS------TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~------~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
...+++|||+. |+|.+++. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCc
Confidence 25789999999 69988773 223488999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY 249 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~ 249 (1553)
++....... ........+++.|+|||.+. ...++.++|||||||++|||++ |.+||.......+
T Consensus 159 ~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 223 (272)
T cd05075 159 SKKIYNGDY-----YRQGRIAKMPVKWIAIESLA----------DRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI 223 (272)
T ss_pred ccccCcccc-----eecCCcccCCcccCCHHHcc----------CCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 876532110 00112223466799999653 3467889999999999999999 6899965332222
Q ss_pred HhcCC-CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 250 RRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 250 ~~~~~-~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..... ......+...+..+.++|.+||+.||++|||++++++++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 224 YDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11111 11111223345689999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=311.10 Aligned_cols=247 Identities=21% Similarity=0.296 Sum_probs=192.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. +..||+|.+....... ....+.+|+++++.++||||+++++++.+++..|+|
T Consensus 6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG----APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC----CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 7999999999999999999885 3679999986542111 112345688999999999999999999999999999
Q ss_pred eccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||.+.....+....
T Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~- 160 (291)
T cd07844 82 FEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY- 160 (291)
T ss_pred EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccc-
Confidence 999999999988653 468999999999999999999999999999999999999999999999999886543222111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----HHHHHhcCC---
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQY--- 254 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~~~~--- 254 (1553)
....++..|+|||.+.+ ...++.++||||+||++|+|++|.+||.... ...+.+...
T Consensus 161 ------~~~~~~~~~~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
T cd07844 161 ------SNEVVTLWYRPPDVLLG---------STEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPT 225 (291)
T ss_pred ------cccccccccCCcHHhhc---------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCC
Confidence 11234678999997642 2346789999999999999999999995432 111100000
Q ss_pred ---------------------CCC---CCCCCCC-CHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 ---------------------DPS---QHLEKIP-DSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ---------------------~~~---~~~~~~~-~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... ...+.+. ...+.++|.+||+.||++||++.++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 226 EETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000 0001111 1578899999999999999999999987
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-31 Score=310.68 Aligned_cols=245 Identities=16% Similarity=0.140 Sum_probs=195.7
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||++.+. ++.|++|.+..... .....+.+|..+++.+.||||+++++.+..+...|+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 38999999999999999999874 36799999865421 123456778889999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ ++|.+++... .+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||.+........
T Consensus 95 v~e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-- 171 (296)
T cd06654 95 VMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (296)
T ss_pred eecccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--
Confidence 999998 5999998654 489999999999999999999999999999999999999999999999998775421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-H-Hh-cCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-Y-RR-GQYDPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~-~~-~~~~~~~ 258 (1553)
......+++.|+|||.+. ...++.++||||+||++|+|++|.+||....... . .. ....+..
T Consensus 172 -----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (296)
T cd06654 172 -----KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 236 (296)
T ss_pred -----ccCcccCCccccCHHHHc----------CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCC
Confidence 112234678899999764 3356789999999999999999999996543221 1 11 1111111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..+.++|.+||..||++||++++++++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 2233345789999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=308.81 Aligned_cols=248 Identities=18% Similarity=0.176 Sum_probs=195.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||.|+||.||++.+.. ..+++|.+... . ....+.+.+|+++++.++||||+++++++..+...|+|+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~----~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK----S-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC----C-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEE
Confidence 6778999999999999999865 45788887543 1 233445677888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||++ ++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 9999 588877754 4568999999999999999999999999999999999999999999999999876432111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.......+++.|+|||.+.... .....++.++||||+||++|||++|.+||....... ...... +..
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~ 228 (282)
T cd06643 158 ---QRRDSFIGTPYWMAPEVVMCET-----SKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP-PTL 228 (282)
T ss_pred ---cccccccccccccCHhhccccC-----CCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC-CCC
Confidence 1112334678899999875321 224567889999999999999999999996433221 222211 111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..++++|.+||+.||.+||+++++++|
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2233456789999999999999999999999988
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-31 Score=301.98 Aligned_cols=245 Identities=24% Similarity=0.340 Sum_probs=199.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||.++... ..+++|.+..... . ......+.+|+++++.++|+||+++++++.+.+..+++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~ 77 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL--S-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIE 77 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc--c-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEE
Confidence 48899999999999999988754 6699999865421 1 23345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ ++|.+++... ..+++.++..++.|++.||.|||+.|++||||||+||+++.++.+||+|||.+........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99998 5999999764 4589999999999999999999999999999999999999999999999998875422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~ 256 (1553)
......+++.|+|||.+. +..++.++|+||+||++|||++|..||........ ..+...+
T Consensus 157 ------~~~~~~~~~~y~ape~~~----------~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQ----------GVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP 220 (256)
T ss_pred ------cccccCCCccccCHhhcC----------CCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 112345688899999764 23467889999999999999999999976543332 2222222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.....+..+.++|.+||..||++||+++++++++
T Consensus 221 ---~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 ---VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ---CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 2244467899999999999999999999999984
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-31 Score=303.95 Aligned_cols=248 Identities=19% Similarity=0.179 Sum_probs=198.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|.+.. ..+++|++.... ....+.+.+|.++++.++||||+++++++......|++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP-----GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc-----hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 79999999999999999999853 669999997542 12346677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 156 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA-- 156 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh--
Confidence 99999 5999988765 6799999999999999999999999999999999999999999999999998865421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~~~ 257 (1553)
......++..|+|||.+... ....++.++|+||+||++|+|++|.+||.... ........+.+.
T Consensus 157 -----~~~~~~~~~~y~~Pe~~~~~-------~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 224 (262)
T cd06613 157 -----KRKSFIGTPYWMAPEVAAVE-------RKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP 224 (262)
T ss_pred -----ccccccCCccccCchhhccc-------ccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc
Confidence 11223467789999976421 11367889999999999999999998886432 222222322221
Q ss_pred C-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 Q-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. ......+.++.++|.+||..||.+||++.++++|
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 225 KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1 1122335679999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=307.95 Aligned_cols=241 Identities=17% Similarity=0.223 Sum_probs=187.4
Q ss_pred EeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHH---HHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 32 VLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIR---ETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~---~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
.||+|+||.||++++.. ..+|+|++.+........ .....++. .++....||||+.+++++..++..|+||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--ETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH--HHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence 48999999999999854 679999987652211111 11122222 344445799999999999999999999999
Q ss_pred cc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcc
Q 000410 107 FF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 185 (1553)
Q Consensus 107 ~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 185 (1553)
+. ++|.+++..++.+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 79 ~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~------- 151 (279)
T cd05633 79 MNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------- 151 (279)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-------
Confidence 99 6999999887789999999999999999999999999999999999999999999999999886432111
Q ss_pred eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch---HHHHHHhcCCCCCCCCCC
Q 000410 186 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---HLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 186 ~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~---~~~~~~~~~~~~~~~~~~ 262 (1553)
.....|++.|+|||.+. .+..++.++||||+||++|+|++|..||... ...............++.
T Consensus 152 --~~~~~~~~~y~aPE~~~---------~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 220 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQ---------KGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPD 220 (279)
T ss_pred --ccCcCCCcCccCHHHhc---------CCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCcc
Confidence 11235788999999763 1235788999999999999999999998532 222222222222333455
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
..+..++++|.+||..||.+|| ++.++++|
T Consensus 221 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 221 SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 5678999999999999999999 69999998
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-31 Score=306.08 Aligned_cols=250 Identities=15% Similarity=0.133 Sum_probs=195.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--C---ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--E---GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~---~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|.+. + ..+++|.+.... .....+.+.+|..+++.++||||+++++++.+++..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 7899999999999999999874 1 258888875431 133455778888999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|+||||++ ++|.+++... +.+++.++..++.|++.||.|||++|++||||||+|||++.++.++|+|||.+.......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 99999998 5999999764 458999999999999999999999999999999999999999999999999887542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH---HHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL---AYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~---~~~~~~~ 254 (1553)
. .........++..|+|||.+. ...++.++|+|||||++||+++ |..||...... ......+
T Consensus 161 ~----~~~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~ 226 (267)
T cd05066 161 E----AAYTTRGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY 226 (267)
T ss_pred c----eeeecCCCccceeecCHhHhc----------cCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC
Confidence 1 111111222356799999764 3457889999999999999886 88888543221 1111112
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.. ..+...++.+.+++.+||+.+|.+||++.++++.+..
T Consensus 227 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 227 RL--PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred cC--CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 11 1223345789999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-31 Score=312.91 Aligned_cols=248 Identities=19% Similarity=0.278 Sum_probs=195.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|++.+.||.|+||.||+|.+.. ..+++|.+...... +.....+.+|+.+++.+.||||+++++++... ...|
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK---EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc---ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 68889999999999999999863 56999998654221 22334456778899999999999999998877 8899
Q ss_pred EEeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||++++|.+++... ..+++.+++.++.||+.||+|||++|++||||||+||+++.++.++|+|||.+.....+...
T Consensus 83 lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 162 (293)
T cd07843 83 MVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP 162 (293)
T ss_pred EEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccc
Confidence 99999999999998764 35899999999999999999999999999999999999999999999999988765432211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----Hhc----
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRG---- 252 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~---- 252 (1553)
.....+++.|+|||.+.+ ...++.++||||+||++|+|++|.+||........ ...
T Consensus 163 -------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~ 226 (293)
T cd07843 163 -------YTQLVVTLWYRAPELLLG---------AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTP 226 (293)
T ss_pred -------cccccccccccCchhhcC---------CccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 122335778999997742 22467899999999999999999999964322111 000
Q ss_pred -----------------C-----CC-CCCCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 -----------------Q-----YD-PSQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 -----------------~-----~~-~~~~~~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. +. ....++.. .++.+.++|.+||+.||++|||++|+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 227 TEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 00 01112222 36789999999999999999999999988
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=314.93 Aligned_cols=252 Identities=20% Similarity=0.290 Sum_probs=193.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||.|+||.||+|.+.. +.||+|.+...... +.....+.+|..+++.++||||+++++++....
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc---CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 79999999999999999999863 67999998654221 112233456778999999999999999886543
Q ss_pred ---EEEEEeccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 99 ---AAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 99 ---~~~lV~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
..|+||||+.++|.+.+.... .+++.+++.++.||+.||+|||++|++||||||+||+++.++.+||+|||.+...
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 459999999999999887653 6899999999999999999999999999999999999999999999999998766
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----H
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----R 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~ 250 (1553)
..+.... ........++..|+|||.+.+ ...++.++||||+||++|||++|.+||........ .
T Consensus 170 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~ 237 (310)
T cd07865 170 SLSKNSK---PNRYTNRVVTLWYRPPELLLG---------ERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLIS 237 (310)
T ss_pred cCCcccC---CCCccCcccCccccCcHHhcC---------CcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 4333221 111123345778999997642 23467899999999999999999999965432110 0
Q ss_pred --hcCCCC--------------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 --RGQYDP--------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 --~~~~~~--------------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...+ ......+.+..++++|.+||..||.+|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 238 QLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred HHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 010000 000112335678899999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=307.80 Aligned_cols=247 Identities=16% Similarity=0.136 Sum_probs=197.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||.|+||.||+|.+.+ +.+++|++.+.. ......+..|..+++.++||||+++++++.+....|+||
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc-----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 68999999999999999999876 569999986542 222345777889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++... ..+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~--- 158 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV--- 158 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc---
Confidence 9999 5999999753 358999999999999999999999999999999999999999999999999886542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH-HhcCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~ 259 (1553)
.......++..|+|||.+. ...++.++|||||||++|+|++ |+.||........ ..........
T Consensus 159 ----~~~~~~~~~~~~~~PE~~~----------~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 224 (261)
T cd05148 159 ----YLSSDKKIPYKWTAPEAAS----------HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP 224 (261)
T ss_pred ----ccccCCCCceEecCHHHHc----------cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC
Confidence 1112333466799999764 3457889999999999999998 7999965432221 1111111122
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...++.+.++|.+||+.||.+|||+.++++.+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 225 CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 33455678999999999999999999999998865
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=309.07 Aligned_cols=247 Identities=20% Similarity=0.302 Sum_probs=191.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. ++.|++|++...... .....+.+|..+++.++|+||+++++++..+...|+|
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE----GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC----CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 7999999999999999999875 467999998654211 1122345677899999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.++|.+++.. ...+++.+++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++....+...
T Consensus 82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-- 159 (291)
T cd07870 82 FEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT-- 159 (291)
T ss_pred EecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC--
Confidence 99999999887754 345888999999999999999999999999999999999999999999999988754322111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH--HHHHh-----c---
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL--LAYRR-----G--- 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~--~~~~~-----~--- 252 (1553)
.....+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||..... ..+.. +
T Consensus 160 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (291)
T cd07870 160 -----YSSEVVTLWYRPPDVLLG---------ATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPT 225 (291)
T ss_pred -----CCCccccccccCCceeec---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCC
Confidence 122235788999997642 22467789999999999999999999963221 11000 0
Q ss_pred -----------CCCC-------CCC----CCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 -----------QYDP-------SQH----LEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 -----------~~~~-------~~~----~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+.. ... +.. ..+..+.+++.+||..||++|||++|++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 226 EDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000 000 000 124578999999999999999999999988
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-34 Score=296.78 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=196.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET------- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~------- 96 (1553)
.|.-..+||+|.||.||+|++++ +.||+|+.....+. +.+-..-.+|+++|..++|+|++.+++++.+
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK---eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc---cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 67778899999999999999865 45788765443211 1122234467789999999999998877632
Q ss_pred -CCEEEEEeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 97 -DKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 -~~~~~lV~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
...+|+|+.+|+.+|...++.+ ..++..+++.++.+++.||.|+|...|+|||+|++|+||+.+|.+||+|||+++..
T Consensus 95 ~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 95 DRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred ccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 2358999999999999999887 57999999999999999999999999999999999999999999999999999877
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----H-
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----Y- 249 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~- 249 (1553)
..+....... +.....|.+|++||.+.+ ...|++++|||..|||++||+++.|.|.+....+ +
T Consensus 175 s~~~n~~kpr---ytnrvvTLwYrppEllLG---------~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is 242 (376)
T KOG0669|consen 175 STSKNVVKPR---YTNRVVTLWYRPPELLLG---------DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLIS 242 (376)
T ss_pred ecccccCCCC---cccceeeeecCCHHHhhc---------ccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHH
Confidence 6554322111 334556899999998864 4578999999999999999999999996543211 1
Q ss_pred --------------------HhcCCCCCC--C--------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 --------------------RRGQYDPSQ--H--------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 --------------------~~~~~~~~~--~--------~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+.+ . -+...+++..+|+.+||..||.+|+.++++|+|
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 111111000 0 011225578899999999999999999999998
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-32 Score=321.25 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=199.1
Q ss_pred CCccceEEEEEeeccCcEEEEEEEECCce--EEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-
Q 000410 22 PSSYNLVLKEVLGGSRFFKSILCKHDEGL--VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK- 98 (1553)
Q Consensus 22 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~--vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~- 98 (1553)
|...-.++...||+|+|-+||+|.+...- ||---+.. .+........++|..|+.+|+.|+||||++||.++.+..
T Consensus 37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~-~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n 115 (632)
T KOG0584|consen 37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKI-RDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN 115 (632)
T ss_pred CCCceeehhhhcccccceeeeeccccccchhhHHHHHhH-HHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC
Confidence 43333467789999999999999996522 33221111 112233455678999999999999999999999997665
Q ss_pred -EEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEecC-CcEEEeecCcccc
Q 000410 99 -AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVLVTSW-NWLYLSDFASFKP 173 (1553)
Q Consensus 99 -~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~g--IvHrDIKp~NILv~~~-~~vkL~DFG~a~~ 173 (1553)
...+|+|++. |+|..|+++.+.++...++.|++||++||.|||++. |+|||||.+||+|+.+ |.|||+|+|+|..
T Consensus 116 ~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 116 KTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL 195 (632)
T ss_pred ceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHH
Confidence 4889999999 899999999999999999999999999999999985 9999999999999865 8999999999986
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc-hHHHH-HHh
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL-SHLLA-YRR 251 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~-~~~~~-~~~ 251 (1553)
...+ ......|||.|||||++. ..|++.+||||||+++.||.|+..||.. ....+ |++
T Consensus 196 ~r~s---------~aksvIGTPEFMAPEmYE-----------E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKK 255 (632)
T KOG0584|consen 196 LRKS---------HAKSVIGTPEFMAPEMYE-----------ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKK 255 (632)
T ss_pred hhcc---------ccceeccCccccChHHHh-----------hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHH
Confidence 5221 112357999999999773 4789999999999999999999989853 22222 332
Q ss_pred cCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
-... .+..+.++.++++++||.+||.. ..+|||+.|+|+|
T Consensus 256 V~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 256 VTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 2221 22357888899999999999999 8999999999998
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=307.71 Aligned_cols=248 Identities=15% Similarity=0.164 Sum_probs=196.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-CC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-DK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~~ 98 (1553)
+|++.+.||+|+||.||+|.+.+ ..|++|++... ........+.+|..+++.++||||+++++++.. +.
T Consensus 7 ~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 7 RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH----ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred heEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 79999999999999999999864 45888887533 123334567788889999999999999998765 56
Q ss_pred EEEEEecccc-CCHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP--------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA 169 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~--------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG 169 (1553)
..+++++|+. ++|.+++... ..+++.++..++.||+.||+|||++|++||||||+||++++++.+||+|||
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCC
Confidence 7899999998 6999998653 358899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA 248 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~ 248 (1553)
+++...... .........++..|+|||.+. ...++.++|||||||++||+++ |++||.......
T Consensus 163 ~~~~~~~~~-----~~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 227 (280)
T cd05043 163 LSRDLFPMD-----YHCLGDNENRPVKWMALESLV----------NKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE 227 (280)
T ss_pred CcccccCCc-----eEEeCCCCCcchhccCHHHHh----------cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH
Confidence 987542211 111112234566799999764 3457889999999999999998 899997544333
Q ss_pred HH---hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 249 YR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 249 ~~---~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+. ...+... .....++.+.+++.+||..||++|||+.++++.+.
T Consensus 228 ~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 228 MAAYLKDGYRLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHHHHcCCCCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 22 2222211 22334678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-31 Score=303.24 Aligned_cols=243 Identities=16% Similarity=0.090 Sum_probs=188.9
Q ss_pred EeeccCcEEEEEEEEC--C--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 32 VLGGSRFFKSILCKHD--E--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~--~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
.||+|+||.||+|.+. + ..||+|++... ......+.+.+|+.+++.++||||++++++++. ...++||||+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~----~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~ 76 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE----NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMA 76 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccc----cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeC
Confidence 4899999999999764 2 34899988543 123455678889999999999999999998864 4689999999
Q ss_pred c-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcc
Q 000410 108 F-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 185 (1553)
Q Consensus 108 ~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 185 (1553)
+ ++|.+++.. +..+++.++..++.||+.||.|||++|++||||||+|||++.++.+||+|||.+........ ..
T Consensus 77 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~----~~ 152 (257)
T cd05115 77 SGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS----YY 152 (257)
T ss_pred CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCcc----ce
Confidence 8 699999874 45689999999999999999999999999999999999999999999999998874422111 00
Q ss_pred eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCCCCCCC
Q 000410 186 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDPSQHLE 261 (1553)
Q Consensus 186 ~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~~~~~~ 261 (1553)
.......+++.|+|||.+. ...++.++|||||||++|||++ |.+||........ ..... ....+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~ 220 (257)
T cd05115 153 KARSAGKWPLKWYAPECIN----------FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK--RLDCP 220 (257)
T ss_pred eccCCCCCCcccCCHHHHc----------cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC--CCCCC
Confidence 0111122346799999764 3357889999999999999996 8999964332221 11111 12234
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...++++.++|.+||..||++||++.++.+.++.
T Consensus 221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 4556899999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=307.35 Aligned_cols=245 Identities=18% Similarity=0.159 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|++.. ..|++|++.... .......+.+|..+++.++||||+++++++.++...|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE----AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc----cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEE
Confidence 57888999999999999999854 569999986542 122334567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++... .+++.++..++.|++.||.|||++|++||||+|+||++++++.++|+|||.++........
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-- 154 (274)
T cd06609 78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK-- 154 (274)
T ss_pred EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccc--
Confidence 99999 5999999876 6899999999999999999999999999999999999999999999999998765332111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc-CCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG-QYDPSQHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~-~~~~~~~~~ 261 (1553)
.....+++.|+|||.+. +..++.++|||||||++|+|++|.+||...+....... .....+.+.
T Consensus 155 -----~~~~~~~~~y~~PE~~~----------~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 219 (274)
T cd06609 155 -----RNTFVGTPFWMAPEVIK----------QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE 219 (274)
T ss_pred -----cccccCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCc
Confidence 11234567799999764 23478999999999999999999999965432221111 111111222
Q ss_pred CC-CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KI-PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. .++.+.+++.+||..||++||+++++++|
T Consensus 220 ~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 220 GNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 22 56789999999999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7e-32 Score=286.33 Aligned_cols=254 Identities=15% Similarity=0.152 Sum_probs=194.1
Q ss_pred cccccCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHH-HHhcCCCCCeeEEEE
Q 000410 16 YYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRE-TFRSIDHPHVWAFQF 92 (1553)
Q Consensus 16 ~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~-~l~~l~hpnIv~~~~ 92 (1553)
.|..|+. +++.+..||+|.-|.|+++++.. ...|||.+.+.++. ++ .+++....+ +++.-+.|+||+.++
T Consensus 86 r~~~din---dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk---ee-~kRILmDldvv~~s~dcpyIV~c~G 158 (391)
T KOG0983|consen 86 RYQADIN---DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK---EE-NKRILMDLDVVLKSHDCPYIVQCFG 158 (391)
T ss_pred ccccChH---HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCH---HH-HHHHHHhhhHHhhccCCCeeeeeee
Confidence 3444444 56667789999999999999976 67999999877433 22 333333334 444445899999999
Q ss_pred EEEeCCEEEEEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 93 WQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 93 ~~~~~~~~~lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
+|..+..+++.||.|...+..+++. .++++|.-+-.+..-++.||.||.+ +||+|||+||+|||++..|.+||||||.
T Consensus 159 yFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGI 238 (391)
T KOG0983|consen 159 YFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGI 238 (391)
T ss_pred EEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccc
Confidence 9999999999999998544444432 3448899899999999999999986 6999999999999999999999999998
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----- 245 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----- 245 (1553)
+....... ......|-+.|||||++.-. ....|+-++||||||++++||.||..||.+.+
T Consensus 239 sGrlvdSk--------AhtrsAGC~~YMaPERidp~-------~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ 303 (391)
T KOG0983|consen 239 SGRLVDSK--------AHTRSAGCAAYMAPERIDPP-------DKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV 303 (391)
T ss_pred cceeeccc--------ccccccCCccccCccccCCC-------CCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH
Confidence 86553222 22345677889999998532 24578999999999999999999999997632
Q ss_pred HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 246 LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.++.. ..++......-.++.+++++..||.+|+.+||...++|+|
T Consensus 304 ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 304 LTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 223333 2222211122367899999999999999999999999998
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=318.72 Aligned_cols=249 Identities=19% Similarity=0.269 Sum_probs=193.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC-----C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD-----K 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~-----~ 98 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++... ........+.+|+.+++.++||||+++++++... .
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF----EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc----ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 7999999999999999999875 467999998532 1223445566788999999999999999876543 3
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|+++||++++|.+++..+ .+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 82 DVYIVQELMETDLYKLIKTQ-HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred eEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 58999999999999988654 48999999999999999999999999999999999999999999999999987653322
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH----h---
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR----R--- 251 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~----~--- 251 (1553)
.... ......+++.|+|||.+.+ ...++.++||||+||++|+|++|++||...+..... .
T Consensus 161 ~~~~----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~ 227 (336)
T cd07849 161 DHTG----FLTEYVATRWYRAPEIMLN---------SKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLG 227 (336)
T ss_pred cccC----CcCCcCcCCCccChHHhhC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 1111 1223456888999997632 235688999999999999999999999654321100 0
Q ss_pred ---------------------cCCCCCCC---CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ---------------------GQYDPSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ---------------------~~~~~~~~---~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........ .....++.+.++|.+||+.||++||++.|+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 228 TPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 011225679999999999999999999999998
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=308.48 Aligned_cols=248 Identities=22% Similarity=0.287 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. +..||+|++...... ....+.+.+|+.+++.++||||++++++++.+...|+|
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD---PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC---ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEE
Confidence 6899999999999999999986 367999998654211 12334567788999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ .|..++.....+++.+++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--- 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD--- 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc---
Confidence 999996 5555555555699999999999999999999999999999999999999999999999999875532211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhc------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRG------ 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~------ 252 (1553)
......++..|+|||.+.+ ...++.++||||+||++|+|++|.+||..... ......
T Consensus 156 ----~~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07847 156 ----DYTDYVATRWYRAPELLVG---------DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIP 222 (286)
T ss_pred ----cccCcccccccCCHHHHhC---------CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 0112235678999997642 23567899999999999999999999964321 111110
Q ss_pred ---------C-----CCCCC-C------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ---------Q-----YDPSQ-H------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ---------~-----~~~~~-~------~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. ..+.. . .....+..+.+||.+||+.||++||++.|+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 223 RHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred HHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0 00000 0 001235678999999999999999999999988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4e-31 Score=309.65 Aligned_cols=250 Identities=18% Similarity=0.151 Sum_probs=198.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+. +..+++|++... .....+.+..|+++++.++||||+++++++..+...|+|
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE-----SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC-----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 6889999999999999999985 366999998643 123335577788999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++... ..+++.+++.++.|++.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-- 158 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-- 158 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc--
Confidence 99999 5999988663 4699999999999999999999999999999999999999999999999998764321111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-HhcCCC--CCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-RRGQYD--PSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-~~~~~~--~~~ 258 (1553)
......+++.|+|||.+.... .....++.++|+|||||++|+|++|.+||........ ...... +..
T Consensus 159 -----~~~~~~~~~~y~~PE~~~~~~-----~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 228 (280)
T cd06611 159 -----KRDTFIGTPYWMAPEVVACET-----FKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL 228 (280)
T ss_pred -----ccceeecchhhcCHHHHhhcc-----cCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc
Confidence 111234678899999875322 1234678899999999999999999999975433221 111111 111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..+.++|.+||+.||.+||+++++++|
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 2233456789999999999999999999999998
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=316.38 Aligned_cols=252 Identities=17% Similarity=0.172 Sum_probs=196.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~ 95 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|++... ......+.+.+|+.+++.+ +||||+++++++.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD----ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc----cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 69999999999999999997632 25899987543 1223345677888899999 7999999999999
Q ss_pred eCCEEEEEecccc-CCHHHHhcCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
.+...|++|||++ |+|.+++..+. .++..++..++.|++.||.|||++||+||||||+|||++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~ 168 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT 168 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence 9999999999998 69999986532 377888999999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 237 (1553)
.++.+||+|||.++...... .........++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g 233 (334)
T cd05100 169 EDNVMKIADFGLARDVHNID-----YYKKTTNGRLPVKWMAPEALF----------DRVYTHQSDVWSFGVLLWEIFTLG 233 (334)
T ss_pred CCCcEEECCcccceeccccc-----ccccccCCCcCceEcCHHHhc----------cCCcCchhhhHHHHHHHHHHHhcC
Confidence 99999999999987542111 000111222345799999764 3457889999999999999998 7
Q ss_pred CCCCCchHHHHHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcc
Q 000410 238 VPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 238 ~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 296 (1553)
.+||.............. .....+...+..+.++|.+||+.+|++||++.|++++++..
T Consensus 234 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 234 GSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 888875544333221111 11122334457899999999999999999999999997654
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=306.24 Aligned_cols=243 Identities=16% Similarity=0.201 Sum_probs=189.3
Q ss_pred EeeccCcEEEEEEEECC--ceEEEEEEeccCCCc-CHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 32 VLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYI-DLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~-~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
.||+|+||.||+|++.. +.||+|++.+..... ..+........+...++...||||+++++++......|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999998853 679999987652111 111111111222344555689999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
++|.+++...+.+++.+++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--------- 151 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--------- 151 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---------
Confidence 5999999887789999999999999999999999999999999999999999999999999886442111
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch---HHHHHHhcCCCCCCCCCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---HLLAYRRGQYDPSQHLEKIP 264 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~---~~~~~~~~~~~~~~~~~~~~ 264 (1553)
.....|+..|+|||.+.. +..++.++||||+||++|||++|..||... ...............++...
T Consensus 152 ~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (278)
T cd05606 152 PHASVGTHGYMAPEVLQK---------GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 222 (278)
T ss_pred CcCcCCCcCCcCcHHhcC---------CCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcC
Confidence 123357888999997641 235788999999999999999999999654 22222222222233345555
Q ss_pred CHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 265 DSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
+..+.++|.+||..||.+|| ++.++++|
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 78999999999999999999 99999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=309.49 Aligned_cols=244 Identities=22% Similarity=0.295 Sum_probs=187.9
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeC--CEEE
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~--~~~~ 101 (1553)
|++.+.||+|+||.||+|.+. +..||+|++.+..... . ... ..+|..+++++. ||||+++++++.++ +..|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~-~~~-~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 76 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL--E-QVN-NLREIQALRRLSPHPNILRLIEVLFDRKTGRLA 76 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc--h-hhh-HHHHHHHHhhcCCCCCccceEEEEecCCCCcEE
Confidence 578899999999999999885 3669999986542111 1 112 234556777774 99999999999887 8899
Q ss_pred EEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||++++|.+.+.. ...+++.++..++.|++.||+|||++|++||||||+||+++. +.+||+|||.++.......
T Consensus 77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 77 LVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred EEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 9999999999998875 356899999999999999999999999999999999999999 9999999998875422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhc----
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRG---- 252 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~---- 252 (1553)
+....++..|+|||.+.. ...++.++||||+||++|||++|.+||...+... ....
T Consensus 155 -------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~ 218 (282)
T cd07831 155 -------YTEYISTRWYRAPECLLT---------DGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTP 218 (282)
T ss_pred -------cCCCCCCcccCChhHhhc---------CCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCC
Confidence 112235778999997642 2356789999999999999999999997543211 1000
Q ss_pred --------------CCCCCC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 --------------QYDPSQ-------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 --------------~~~~~~-------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+.... .+....+..++++|.+||+.||++||+++++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 219 DAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred CHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000 0011235789999999999999999999999998
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-31 Score=308.07 Aligned_cols=249 Identities=18% Similarity=0.203 Sum_probs=193.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD-- 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~-- 97 (1553)
-|++.+.||+|+||.||+|+.. +..||+|.+... ........+.+|+.+++.+.||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE----SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 80 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc----ccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 5788999999999999999752 356999998543 1233456788899999999999999999988775
Q ss_pred CEEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
...|+||||++ ++|.+++... ..+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 57899999998 5999999654 358999999999999999999999999999999999999999999999999987553
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--H-------
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--L------- 246 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~------- 246 (1553)
.... .........++..|+|||.+. +..++.++|||||||++|||+++..|+.... .
T Consensus 161 ~~~~----~~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd05079 161 TDKE----YYTVKDDLDSPVFWYAPECLI----------QSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPT 226 (284)
T ss_pred cCcc----ceeecCCCCCCccccCHHHhc----------cCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccc
Confidence 2211 111223345667799999764 3457889999999999999999855432110 0
Q ss_pred ---------HH-HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 247 ---------LA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 247 ---------~~-~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.. ...+. ....+...+..+.+||.+||+.||++||++++++++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 227 HGQMTVTRLVRVLEEGK---RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred cccccHHHHHHHHHcCc---cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 00 01111 111223346789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=303.60 Aligned_cols=255 Identities=20% Similarity=0.236 Sum_probs=199.9
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCC-----cCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDY-----IDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~-----~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
++|.+.+.||.|+||+||+|... +..+|+|.+...... .......+.+..|..+++.++||||+++++++...
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 80 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE 80 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence 36899999999999999999875 467999988643111 11233445678888999999999999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
...++||||+. ++|.+++...+.+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||.++....
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 99999999998 59999998877899999999999999999999999999999999999999999999999998875421
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh---c
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR---G 252 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~---~ 252 (1553)
..... ......++..|+|||.+... ...++.++|+|||||++|+|++|.+||...+. ..+.. .
T Consensus 161 ~~~~~-----~~~~~~~~~~y~~PE~~~~~--------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 227 (272)
T cd06629 161 IYDND-----QNMSMQGSVFWMAPEVIHSY--------SQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK 227 (272)
T ss_pred ccccc-----ccccccCCccccCHHHhccc--------cCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc
Confidence 11100 11223467889999987521 12478899999999999999999988864332 22221 1
Q ss_pred CCC--CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~--~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... .........+..++++|.+||..||++||+++++++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 RSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 111 1111222335789999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=309.41 Aligned_cols=250 Identities=16% Similarity=0.161 Sum_probs=192.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHV 87 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnI 87 (1553)
+|++.+.||+|+||.||++++.+ ..+|+|++... ........+.+|+.+++.++||||
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED----ANKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCc
Confidence 79999999999999999986432 24889988543 123445677888899999999999
Q ss_pred eEEEEEEEeCCEEEEEecccc-CCHHHHhcCCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcE
Q 000410 88 WAFQFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 155 (1553)
Q Consensus 88 v~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~~-----------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NI 155 (1553)
+++++++..+...|++|||+. ++|.+++.... .+++.++..++.||+.||+|||++|++||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999998 69999986532 366788999999999999999999999999999999
Q ss_pred EEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH
Q 000410 156 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235 (1553)
Q Consensus 156 Lv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 235 (1553)
|++.++.++|+|||+++...... .....+...+++.|+|||... ...++.++|||||||++|||+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~DiwSlG~~l~el~ 226 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGD-----YYRIQGRAVLPIRWMSWESIL----------LGKFTTASDVWAFGVTLWEIL 226 (296)
T ss_pred EEcCCCCEEeccCcccccccCCc-----ceeccCcCcCccccCCHHHHh----------cCCccchhhhhHHHHHHHHHH
Confidence 99999999999999987542211 011112223356799999653 346788999999999999999
Q ss_pred c--CCCCCCchHHHHHHh--------cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 236 L--EVPFFELSHLLAYRR--------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 236 t--g~~pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+ |..||......+... .........+...++.+++|+.+||+.||++||++.++++.++
T Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 227 TLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 8 677885432222111 1111111122334578999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=305.89 Aligned_cols=249 Identities=18% Similarity=0.162 Sum_probs=192.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD----- 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~----- 97 (1553)
.|++.+.||.|+||.||+|...+ ..||+|++..... . ...+..|..+++.+ +||||+++++++...
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--E----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc--c----HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 67888999999999999998854 5699999865421 1 23455666788887 699999999988653
Q ss_pred -CEEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccc
Q 000410 98 -KAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173 (1553)
Q Consensus 98 -~~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~ 173 (1553)
...|++|||++ ++|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++..
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 46899999999 5999998753 3589999999999999999999999999999999999999999999999999875
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHh-
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRR- 251 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~- 251 (1553)
...... ......|++.|+|||.+.... .....++.++||||+||++|||++|.+||.... ......
T Consensus 161 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~ 228 (272)
T cd06637 161 LDRTVG-------RRNTFIGTPYWMAPEVIACDE-----NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228 (272)
T ss_pred cccccc-------cCCcccccccccCHhHhcccc-----CcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 421110 112345778899999875321 123467889999999999999999988885322 222211
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.............+..+++||.+||..||.+||+++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred hcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 11111112223445789999999999999999999999998
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-31 Score=309.94 Aligned_cols=245 Identities=16% Similarity=0.136 Sum_probs=196.4
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||++.+. ++.||+|.+..... ...+.+.+|..+++.++||||+++++++..++..|+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ-----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc-----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 37999999999999999999874 46799999865421 123456778889999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ ++|.+++... .+++.++..++.|++.||.|||+.||+||||||+|||++.++.++|+|||.+........
T Consensus 94 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-- 170 (297)
T cd06656 94 VMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (297)
T ss_pred eecccCCCCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc--
Confidence 999998 5999998654 489999999999999999999999999999999999999999999999998865321110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh--cC-CCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR--GQ-YDPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~--~~-~~~~~ 258 (1553)
......+++.|+|||.+. +..++.++|+||+||++|+|++|.+||...+...... .. ..+..
T Consensus 171 -----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~ 235 (297)
T cd06656 171 -----KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL 235 (297)
T ss_pred -----CcCcccCCccccCHHHHc----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCC
Confidence 112334678899999764 3456789999999999999999999996543321111 11 11111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..++++|.+||..||++||+++++++|
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2233456789999999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=310.05 Aligned_cols=250 Identities=17% Similarity=0.141 Sum_probs=198.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++. +..||+|.+.... . ......+.+|.++++.++||||+++++.+..++..|+|
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---D-ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---C-HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEE
Confidence 5888999999999999999986 4679999886431 1 22335677888999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFFN-SLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++| +|..++... ..+++..+.+++.||+.||.|||+ .||+||||||+||+++.++.++|+|||.+......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 999995 898888653 368999999999999999999997 59999999999999999999999999988644211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~ 254 (1553)
...+..+++.|+|||.+.+... .....++.++||||+||++|+|++|..||....... +.....
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~----~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 224 (286)
T cd06622 157 --------LAKTNIGCQSYMAPERIKSGGP----NQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD 224 (286)
T ss_pred --------ccccCCCccCccCcchhcCCCC----CccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh
Confidence 1123346778999998753321 123457889999999999999999999996432211 111111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....++...+++++++|.+||+.+|++||+++++++|
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 225 GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 12223344467899999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-31 Score=308.67 Aligned_cols=248 Identities=17% Similarity=0.151 Sum_probs=194.2
Q ss_pred cceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
.+|++.+.||.|+||.||+|.+. ++.||+|++.... .......+.+|+.+++.+.||||+++++++..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc----CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 37899999999999999999874 3569999986432 133456688888999999999999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCc
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP----------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 154 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~----------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~N 154 (1553)
...|++|||++ |+|.+++... ..+++.++..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999 6999998632 237788899999999999999999999999999999
Q ss_pred EEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHH
Q 000410 155 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234 (1553)
Q Consensus 155 ILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 234 (1553)
||++.++.++|+|||.+.......... .......+..|+|||.+. ...++.++|||||||++|||
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el 225 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYK-----ASENDAIPIRWMPPESIF----------YNRYTTESDVWAYGVVLWEI 225 (288)
T ss_pred eEecCCCceEECccccceecccCcccc-----ccCCCccChhhcCHHHHh----------cCCCCchhHHHHHHHHHHHH
Confidence 999999999999999887543221100 011122345699999653 34678899999999999999
Q ss_pred Hc-CCCCCCchHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 235 FL-EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 235 lt-g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
++ |..||....... +..+... ..+...+..+.+||.+||+.||.+||+++|+++.++
T Consensus 226 ~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 226 FSYGMQPYYGMAHEEVIYYVRDGNVL---SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HhCCCCCCCCCCHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 97 776764322222 2222211 123344678999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-31 Score=302.89 Aligned_cols=246 Identities=15% Similarity=0.121 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||+|...+ ..+++|.+.... .. .+.+.+|+.+++.++||||+++++++..+...|+||
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~--~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred heeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc--cC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 79999999999999999998865 459999886432 11 245677889999999999999999999988999999
Q ss_pred cccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++.... .+++.++..++.|++.||.|||++|++||||||+||++++++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-- 158 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY-- 158 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhh--
Confidence 9998 59999997643 589999999999999999999999999999999999999999999999998875422110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhc-CCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRG-QYDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~ 259 (1553)
. .......+..|+|||.+. +..++.++||||+||++|+|++ |++||...+....... .......
T Consensus 159 ---~-~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~ 224 (261)
T cd05034 159 ---T-AREGAKFPIKWTAPEAAN----------YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP 224 (261)
T ss_pred ---h-hhhccCCCccccCHHHhc----------cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 0 001112345799999764 3457889999999999999998 8999965433221111 1111111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.+...+..+++++.+||..||++||+++++++-+
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l 258 (261)
T cd05034 225 RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFL 258 (261)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 2233367899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-31 Score=305.57 Aligned_cols=249 Identities=20% Similarity=0.192 Sum_probs=196.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||.|+||.||+|+... ..+++|.+... ..+.....+.+|+++++.++||||+++++++.+..
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT----KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc----cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 78999999999999999999642 45899988543 22335567888889999999999999999999989
Q ss_pred EEEEEecccc-CCHHHHhcCCC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPP---------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~~---------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
..|+||||++ |+|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999 69999997654 6899999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|+++...... ........++..|+|||.+. +...+.++|||||||++|+|++ |.+||......
T Consensus 162 ~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~ 225 (275)
T cd05046 162 SLSKDVYNSE------YYKLRNALIPLRWLAPEAVQ----------EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE 225 (275)
T ss_pred ccccccCccc------ccccCCceeEEeecChhhhc----------cCCCCchhhHHHHHHHHHHHHhCCCCCccccchH
Confidence 9876432111 01112233467799999764 3346788999999999999998 68888542222
Q ss_pred HHHhcCC--CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 248 AYRRGQY--DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 248 ~~~~~~~--~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+..... ......+...+..+.+++.+||+.||++||++.|+++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 226 EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 2211111 1111123345678999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=306.31 Aligned_cols=245 Identities=17% Similarity=0.115 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|+..+.||.|+||.||+|.+.. ..||+|++.... .......+.+|+.+++.+.||||+++++++.++...|+|
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc----cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 57788999999999999998853 569999986542 133456788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ ++|.+++... .+++.++..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~i~~~-~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--- 156 (277)
T cd06640 81 MEYLGGGSALDLLRAG-PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--- 156 (277)
T ss_pred EecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc---
Confidence 99998 5999998765 489999999999999999999999999999999999999999999999998865421110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPSQHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~~~~~ 261 (1553)
......++..|+|||.+. +..++.++|+|||||++|||++|.+||............. ...+.+.
T Consensus 157 ----~~~~~~~~~~y~apE~~~----------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (277)
T cd06640 157 ----KRNTFVGTPFWMAPEVIQ----------QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLT 222 (277)
T ss_pred ----ccccccCcccccCHhHhc----------cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCc
Confidence 111224567799999764 3357889999999999999999999997543322211111 1122233
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+..+.++|.+||+.+|++||+++++++|
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 3445789999999999999999999999998
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=305.95 Aligned_cols=250 Identities=18% Similarity=0.148 Sum_probs=191.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+. +..||+|.+.+.... +...+.+.++...++.++||||+++++++..+...|++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS---QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc---HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 6899999999999999999986 467999998654211 12222333333346777999999999999999999999
Q ss_pred eccccCCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFFNSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++|+|.+++.. ...+++..+..++.||+.||+|||++ +++||||||+||+++.++.+||+|||.+.......
T Consensus 79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 158 (283)
T cd06617 79 MEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV 158 (283)
T ss_pred hhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 99999998887743 34689999999999999999999997 99999999999999999999999999986542110
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch--HHHHHHhcCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS--HLLAYRRGQYDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~--~~~~~~~~~~~~ 256 (1553)
......++..|+|||.+.+.. ....++.++|+||+||++|+|++|..||... ....+.......
T Consensus 159 --------~~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 224 (283)
T cd06617 159 --------AKTIDAGCKPYMAPERINPEL------NQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP 224 (283)
T ss_pred --------ccccccCCccccChhhcCCcc------cccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC
Confidence 011124577899999875321 1245788999999999999999999888631 122222211111
Q ss_pred CCCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... ....++++.++|.+||..+|++||+++++++|
T Consensus 225 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 225 SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112 22346789999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=314.02 Aligned_cols=248 Identities=22% Similarity=0.263 Sum_probs=194.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-EEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK-AAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~-~~~lV 103 (1553)
+|.-...||+|+||.||+|...+ ..||||.+..... .. .+++..|++++.+++|||++++++||.+.+ ..+||
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~----~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSG----QG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCC----cc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 56666899999999999999988 6799997754321 11 445889999999999999999999999888 59999
Q ss_pred ecccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 104 RQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKG---ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~g---IvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
+||++ |+|.+++..+. .++|..+..|+.++++||+|||+.. |+||||||+|||+|++..+||+|||+++.. +
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~--~ 228 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLG--P 228 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccC--C
Confidence 99999 89999997654 7999999999999999999999854 999999999999999999999999999643 1
Q ss_pred CCCCCCcceeeecC-CCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH------HHHH-
Q 000410 178 YDDPSDFSFFFDTG-GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH------LLAY- 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~-~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~------~~~~- 249 (1553)
.. ... ..+. .||.+|+|||.+. .+.++.++||||||+++.||++|+++.+... +..+
T Consensus 229 ~~---~~~--~~~~~~gt~gY~~PEy~~----------~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~ 293 (361)
T KOG1187|consen 229 EG---DTS--VSTTVMGTFGYLAPEYAS----------TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA 293 (361)
T ss_pred cc---ccc--eeeecCCCCccCChhhhc----------cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence 10 111 1122 6899999999653 4678999999999999999999987776321 2222
Q ss_pred ----HhcCCC--CCCCCC-CCCC--H---HHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 250 ----RRGQYD--PSQHLE-KIPD--S---GIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 250 ----~~~~~~--~~~~~~-~~~~--~---~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..+... ..+.+. ...+ . .+..+..+|++.+|.+||++.|+++.++.
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~ 351 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEG 351 (361)
T ss_pred HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHh
Confidence 122111 122222 1111 2 35677889999999999999999888743
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=302.02 Aligned_cols=251 Identities=20% Similarity=0.136 Sum_probs=198.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|...+ ..+++|++.+... ......+.+|+++++.++||||+++++.+..++..|++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC----QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc----chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEE
Confidence 68999999999999999998753 5699999865421 12445678888899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 104 RQYFF-NSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
|||++ ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++++++.++|+|||++.....+..
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99998 5999998653 4589999999999999999999999999999999999999999999999998876543322
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYD 255 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~ 255 (1553)
... .......++..|+|||.+.. ...++.++|+|||||++|+|++|+.||......+ .......
T Consensus 158 ~~~---~~~~~~~~~~~y~~Pe~~~~---------~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 225 (267)
T cd06610 158 RTR---KVRKTFVGTPCWMAPEVMEQ---------VHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPP 225 (267)
T ss_pred ccc---cccccccCChhhcChHHHcc---------ccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCC
Confidence 210 11123346788999997742 1256889999999999999999999986543222 2222111
Q ss_pred CCCCCC--CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 PSQHLE--KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~--~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...... ...++.+.+++.+||..||++||+++++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111111 1335789999999999999999999999998
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-31 Score=302.02 Aligned_cols=243 Identities=19% Similarity=0.148 Sum_probs=196.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+.. ..+++|.+.... ..+.+.+|.++++.++||||+++++++.++...|++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-------DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 78999999999999999999864 679999985431 156788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
+||++ ++|.+++.. ...+++.++..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++........
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence 99999 599999864 45689999999999999999999999999999999999999999999999999876532211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC---CCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY---DPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~---~~~~ 258 (1553)
......++..|+|||.+. +..++.++||||+||++|+|++|.+||............. ....
T Consensus 155 -----~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 219 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQ----------EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTL 219 (256)
T ss_pred -----ccccccCCccccCHHHHh----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCC
Confidence 011223577899999764 3357889999999999999999999986543222111111 1111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..+.++|.+||+.||++||++.|+++|
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 1223345789999999999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=308.55 Aligned_cols=255 Identities=20% Similarity=0.269 Sum_probs=203.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
+|.+.+.||+|+||.||++... +..|++|++.+... ......+.+.+|.++++.+. ||||+++++++..++..|+
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL--IKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc--cchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 6899999999999999999885 46799999876421 12233466778889999998 9999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ ++|.+++.+.+.+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus 80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence 999996 7999999888889999999999999999999999999999999999999999999999999887553322110
Q ss_pred CC-------------cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH
Q 000410 182 SD-------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA 248 (1553)
Q Consensus 182 ~~-------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~ 248 (1553)
.. .........++..|+|||.+. ...++.++|||||||+++++++|.+||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN----------EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhC----------CCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 00 001122334678899999764 2347889999999999999999999997554332
Q ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCH----HHHHHh
Q 000410 249 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA----ESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa----~elL~~ 292 (1553)
..+........++...++.+.++|.+||+.||.+||++ +++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 230 TFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 22211122223444446789999999999999999999 999988
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=308.15 Aligned_cols=244 Identities=17% Similarity=0.161 Sum_probs=196.3
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||.|+||.||++.+. ++.|++|.+..... ...+.+.+|..+++.++||||+++++++......|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-----PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-----chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEE
Confidence 37999999999999999999874 46799999865421 123456778889999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|+||+. ++|.+++... .+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 94 v~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-- 170 (296)
T cd06655 94 VMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-- 170 (296)
T ss_pred EEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--
Confidence 999999 5898888755 489999999999999999999999999999999999999999999999998775421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~~~~~~ 257 (1553)
......++..|+|||.+. ...++.++|||||||++|+|++|.+||...+.. ....... +.
T Consensus 171 -----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~-~~ 234 (296)
T cd06655 171 -----KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PE 234 (296)
T ss_pred -----cCCCcCCCccccCcchhc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-cc
Confidence 112234677899999764 345678999999999999999999999754322 1222211 11
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+...++.++++|.+||..||.+||++.++++|
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 235 LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 12233446789999999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=334.04 Aligned_cols=249 Identities=17% Similarity=0.135 Sum_probs=183.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc---eEEEEE--------------EeccCCCcCHHHHHHHHHHHHHHHhcCCCCCee
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG---LVLVKV--------------YFKRGDYIDLREYERRLFHIRETFRSIDHPHVW 88 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~---~vavKv--------------~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv 88 (1553)
+|++.+.||+|+||+||+|..+.. ..++|. +.+. ..........+.+|+.+|+.++||||+
T Consensus 149 ~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 149 HFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKR--VKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred ccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHH--hhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 699999999999999999876431 122221 1111 011123455678899999999999999
Q ss_pred EEEEEEEeCCEEEEEeccccCCHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 89 AFQFWQETDKAAYLLRQYFFNSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 89 ~~~~~~~~~~~~~lV~E~~~gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
+++++++..+..|+|++++.++|.+++... ......+++.|+.||+.||+|||++||+||||||+|||++.++.+
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~v 306 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKI 306 (501)
T ss_pred cEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999887543 223466788899999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCC-CCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-PFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~-~pf~ 242 (1553)
||+|||+++....... .......|++.|+|||++. +..++.++|||||||++|||++|. +||.
T Consensus 307 kL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~~~~~p~~ 370 (501)
T PHA03210 307 VLGDFGTAMPFEKERE------AFDYGWVGTVATNSPEILA----------GDGYCEITDIWSCGLILLDMLSHDFCPIG 370 (501)
T ss_pred EEEeCCCceecCcccc------cccccccCCcCCCCchhhc----------CCCCCcHHHHHHHHHHHHHHHHCCCCCcc
Confidence 9999999876522111 1112345789999999764 345788999999999999999984 4553
Q ss_pred ch------HHHHHHhcCCCCCC-----------------------CC-----CCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000410 243 LS------HLLAYRRGQYDPSQ-----------------------HL-----EKIPDSGIRKMILHMIQLEPELRFSAES 288 (1553)
Q Consensus 243 ~~------~~~~~~~~~~~~~~-----------------------~~-----~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 288 (1553)
.. ++.+.......... .+ ....+..+.++|.+||+.||++|||+.|
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~e 450 (501)
T PHA03210 371 DGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAE 450 (501)
T ss_pred CCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHH
Confidence 21 11111110000000 00 0012456788899999999999999999
Q ss_pred HHHh
Q 000410 289 YLQN 292 (1553)
Q Consensus 289 lL~~ 292 (1553)
+|+|
T Consensus 451 lL~h 454 (501)
T PHA03210 451 LLAL 454 (501)
T ss_pred HhhC
Confidence 9998
|
|
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=302.18 Aligned_cols=252 Identities=14% Similarity=0.085 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--c---eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~---~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|+..+.||+|+||.||+|+... + .+++|.+.... .....+.+..|+++++.++||||+++++++...+..
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY----TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC----CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 78889999999999999998752 2 58888875431 123345677888999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|+||||++ ++|.+++.. .+.+++.++..++.|++.||+|||++|++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 99999999 599999865 3568999999999999999999999999999999999999999999999999886542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCCC-C
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYD-P 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~~-~ 256 (1553)
. . .........+..|+|||.+. ...++.++|||||||++|||++ |..||.............. .
T Consensus 162 ~--~--~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~ 227 (268)
T cd05063 162 E--G--TYTTSGGKIPIRWTAPEAIA----------YRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF 227 (268)
T ss_pred c--c--ceeccCCCcCceecCHHHhh----------cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC
Confidence 1 0 01111112245699999764 3357889999999999999997 8888854332222111111 1
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
........+..+.+++.+||+.||++||++.++++.+..
T Consensus 228 ~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 228 RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 111122345789999999999999999999999988754
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=304.35 Aligned_cols=251 Identities=16% Similarity=0.141 Sum_probs=198.3
Q ss_pred cceEEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
.+|++.+.||+|+||.||+|.+.. ..+++|++.+.. .......+.+|+.+++.++||||+++++++.. .
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET----SPKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 378999999999999999998642 248888875542 23455667888899999999999999999887 6
Q ss_pred EEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
..++||||+. |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||.++....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 7899999998 6999999763 4689999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCCC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYD 255 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~~ 255 (1553)
... ........++..|+|||.+. ...++.++|+||+||++|||++ |.+||.......+......
T Consensus 162 ~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 226 (279)
T cd05057 162 DEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK 226 (279)
T ss_pred ccc-----ceecCCCcccccccCHHHhh----------cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC
Confidence 111 11112223356799999663 3457889999999999999998 8999976444332221111
Q ss_pred -CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 256 -PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 256 -~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.....+...+..+.+++.+||..||++||++.++++.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~ 267 (279)
T cd05057 227 GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSK 267 (279)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 1122344556789999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-31 Score=302.36 Aligned_cols=242 Identities=15% Similarity=0.158 Sum_probs=193.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
.+|++.+.||+|+||.||++...+..||+|++... .....+.+|+.+++.++||||+++++++..+ ..|++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~-------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCD-------VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCc-------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 37999999999999999999988888999998542 1234567788899999999999999998655 479999
Q ss_pred cccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+.......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 9999 59999997543 48899999999999999999999999999999999999999999999999887542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~ 259 (1553)
.....+..|+|||.+. ...++.++|+|||||++|||++ |.+||............. .....
T Consensus 155 -------~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 217 (254)
T cd05083 155 -------DNSKLPVKWTAPEALK----------HKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRME 217 (254)
T ss_pred -------CCCCCCceecCHHHhc----------cCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCC
Confidence 1122345699999663 3457889999999999999997 899997554433221111 11111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.....++.+.+++.+||+.+|++||+++++++.++
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 23344678999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.2e-31 Score=303.12 Aligned_cols=246 Identities=15% Similarity=0.108 Sum_probs=191.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||+|...+ ..+|+|.+..... . .+.+.+|+.+++.++||||+++++++.. ...|++|
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--S----PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--C----HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEE
Confidence 68999999999999999998765 5699998865321 1 2346778899999999999999998754 5689999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||++++++.++|+|||.+........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 9998 5999998653 3489999999999999999999999999999999999999999999999999865421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~ 259 (1553)
. ......++..|+|||.+. ...++.++|||||||++|+|++ |.+||............. .....
T Consensus 158 ---~-~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 223 (260)
T cd05070 158 ---T-ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 223 (260)
T ss_pred ---c-cccCCCCCccccChHHHh----------cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 0 011122355699999763 3457889999999999999999 799996543322211111 11122
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...+..+++++.+||..||++|||++++++-++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 34455678999999999999999999999987543
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-31 Score=313.24 Aligned_cols=252 Identities=20% Similarity=0.253 Sum_probs=193.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~ 99 (1553)
+|.+.+.||+|+||.||+|.+.. ..||+|++..... ........+.+|+.+++.++||||+++++++.+. ..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE--QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKS 78 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc--cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCce
Confidence 47889999999999999999844 6799999976421 1122334456777899999999999999999888 88
Q ss_pred EEEEeccccCCHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec----CCcEEEeecCc
Q 000410 100 AYLLRQYFFNSLRDRLST-----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS----WNWLYLSDFAS 170 (1553)
Q Consensus 100 ~~lV~E~~~gsL~d~l~~-----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~----~~~vkL~DFG~ 170 (1553)
.|+||||++++|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 79 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 79 VYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999999988887742 236899999999999999999999999999999999999999 89999999998
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH--
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-- 248 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-- 248 (1553)
++........ ........+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||.......
T Consensus 159 ~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~ 225 (316)
T cd07842 159 ARLFNAPLKP----LADLDPVVVTIWYRAPELLLG---------ARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKK 225 (316)
T ss_pred ccccCCCccc----ccccCCccccccccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccc
Confidence 8755332211 111123346788999997642 2356889999999999999999999996322110
Q ss_pred -----------HHhc----------------CC------CCCCCCC-----------CCCCHHHHHHHHHhcccCcCCCC
Q 000410 249 -----------YRRG----------------QY------DPSQHLE-----------KIPDSGIRKMILHMIQLEPELRF 284 (1553)
Q Consensus 249 -----------~~~~----------------~~------~~~~~~~-----------~~~~~~l~~LI~~mL~~dP~~Rp 284 (1553)
+... .+ ......+ ...+..+.++|.+||+.||++||
T Consensus 226 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 305 (316)
T cd07842 226 SNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRI 305 (316)
T ss_pred cchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCc
Confidence 0000 00 0000011 13456789999999999999999
Q ss_pred CHHHHHHh
Q 000410 285 SAESYLQN 292 (1553)
Q Consensus 285 sa~elL~~ 292 (1553)
|+.|+++|
T Consensus 306 s~~eil~~ 313 (316)
T cd07842 306 TAEEALEH 313 (316)
T ss_pred CHHHHhcC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-31 Score=320.99 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=194.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~ 97 (1553)
+|.+.+.||+|+||.||+|++.+ ..||+|++..... ....+.+.+|++++..+. ||||+++++++...
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR----SSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC----hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 68888999999999999998642 4699999965421 222345778889999997 99999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCC----------------------------------------------------------
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP---------------------------------------------------------- 118 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~---------------------------------------------------------- 118 (1553)
+..|+||||+. |+|.+++...
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999 6999998542
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 119 ----------------------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 119 ----------------------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
+.+++..+..|+.||+.||.|||++||+||||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC 273 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe
Confidence 2366778889999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 237 (1553)
.++.+||+|||+++......... ......+++.|+|||.+. ...++.++|||||||++|||++ |
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslGvil~e~l~~g 338 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYI-----SKGSTFLPLKWMAPESIF----------NNLYTTLSDVWSFGILLWEIFTLG 338 (401)
T ss_pred CCCEEEEEecCcceecccccccc-----cCCCcCCCCceeChHHhc----------CCCCCcHhHHHHHHHHHHHHHHcC
Confidence 99999999999987542111100 011223567799999764 3357889999999999999998 7
Q ss_pred CCCCCchHH----HHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 238 VPFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 238 ~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..||..... ......... ...+...+..+.+|+.+||..+|.+||+++++++.++.
T Consensus 339 ~~P~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 339 GTPYPELPMNEQFYNAIKRGYR--MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred CCCCCCCCchHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 888864321 122222221 12334456789999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=299.44 Aligned_cols=244 Identities=16% Similarity=0.116 Sum_probs=190.5
Q ss_pred EEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-
Q 000410 31 EVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF- 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~- 108 (1553)
+.||+|+||.||+|...+ ..+|+|++.... .......+.+|.++++.++||||+++++++......++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL----PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC----CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCC
Confidence 368999999999998765 569999875431 23344567788899999999999999999999999999999998
Q ss_pred CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
++|.+++.. ...+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........ ..
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------~~ 150 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY------SS 150 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc------cc
Confidence 699998865 34589999999999999999999999999999999999999999999999998864321100 00
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHh-cCCCCCCCCCCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRR-GQYDPSQHLEKIPD 265 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~ 265 (1553)
.....++..|+|||.+. ...++.++|||||||++|+|++ |..||.......... .........+...+
T Consensus 151 ~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (250)
T cd05085 151 SGLKQIPIKWTAPEALN----------YGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCP 220 (250)
T ss_pred CCCCCCcccccCHHHhc----------cCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 11123356699999764 3457889999999999999998 888986543322211 11111112233446
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 266 SGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 266 ~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..+.+++.+||..+|++||++.++++.+.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 78999999999999999999999998753
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.2e-31 Score=305.13 Aligned_cols=250 Identities=17% Similarity=0.176 Sum_probs=186.6
Q ss_pred EEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 31 EVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
+.||+|+||+||+|.... ..+++|.+... ........+.+|+..++.++||||+++++.+......|+||||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~ 76 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS----ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEF 76 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc----CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEe
Confidence 368999999999997543 34777766432 1233445677788899999999999999999999999999999
Q ss_pred cc-CCHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 107 FF-NSLRDRLSTPP-----FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 107 ~~-gsL~d~l~~~~-----~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
++ |+|.+++.... ..++.....++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--- 153 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE--- 153 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccc---
Confidence 99 69999986532 2467788899999999999999999999999999999999999999999987643211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH----HHH-hcCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL----AYR-RGQY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~----~~~-~~~~ 254 (1553)
..........+++.|+|||.+...... .....++.++|||||||++|||++ |.+||...... ... ....
T Consensus 154 --~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~ 228 (269)
T cd05042 154 --DYYITKDCHAVPLRWLAPELVEIRGQD---LLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDI 228 (269)
T ss_pred --hheeccCCCCCcccccCHHHHhhcccc---ccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCc
Confidence 000111223345679999987533211 123467889999999999999999 68888643221 111 1111
Q ss_pred C-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 D-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 ~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. +.+.++...++.+.+++..|+ .||++||+++++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 1 223344456678899999998 5999999999999764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=280.26 Aligned_cols=304 Identities=20% Similarity=0.299 Sum_probs=247.3
Q ss_pred CCCcccCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcE
Q 000410 1122 DSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1122 ~~~W~p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~ 1201 (1553)
.+.|...-++-+.+.+|.++|.|+++.|.+.+|+|||.|+|+||||+.++. -.+++.+|...|..+++++-..+
T Consensus 134 rPeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~------LkltltGhi~~vr~vavS~rHpY 207 (460)
T KOG0285|consen 134 RPEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ------LKLTLTGHIETVRGVAVSKRHPY 207 (460)
T ss_pred CccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe------EEEeecchhheeeeeeecccCce
Confidence 346776678899999999999999999999999999999999999999886 56788899999999999998899
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+.+|+.|+.|+.||++.. .+.....+|-..|.+++.+|. -.+|++|+.|.++++||+|+...+
T Consensus 208 lFs~gedk~VKCwDLe~n--------------kvIR~YhGHlS~V~~L~lhPT---ldvl~t~grDst~RvWDiRtr~~V 270 (460)
T KOG0285|consen 208 LFSAGEDKQVKCWDLEYN--------------KVIRHYHGHLSGVYCLDLHPT---LDVLVTGGRDSTIRVWDIRTRASV 270 (460)
T ss_pred EEEecCCCeeEEEechhh--------------hhHHHhccccceeEEEecccc---ceeEEecCCcceEEEeeecccceE
Confidence 999999999999999841 122233456778999999998 569999999999999999999999
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
.++.+ |..+|.++.+.|-.-.+++||.|++|++||+|.++....+.+ |...+.+++. +|... .++++
T Consensus 271 ~~l~G--H~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~-hkksvral~l-hP~e~---------~fASa 337 (460)
T KOG0285|consen 271 HVLSG--HTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTH-HKKSVRALCL-HPKEN---------LFASA 337 (460)
T ss_pred EEecC--CCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeec-ccceeeEEec-CCchh---------hhhcc
Confidence 99977 999999999999888999999999999999999998888876 6677888888 77654 45555
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+. ..|+-|++..|...+-+. +|..-|+++...
T Consensus 338 s~-dnik~w~~p~g~f~~nls-----------------------------------------------gh~~iintl~~n 369 (460)
T KOG0285|consen 338 SP-DNIKQWKLPEGEFLQNLS-----------------------------------------------GHNAIINTLSVN 369 (460)
T ss_pred CC-ccceeccCCccchhhccc-----------------------------------------------cccceeeeeeec
Confidence 44 458999999886543332 233468888888
Q ss_pred CCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccC
Q 000410 1442 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAG 1521 (1553)
Q Consensus 1442 p~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1521 (1553)
.||.+++||+.|.|.+||.+++-+=+-.... + +| ..+.
T Consensus 370 sD~v~~~G~dng~~~fwdwksg~nyQ~~~t~---------------------v-----qp----------------GSl~ 407 (460)
T KOG0285|consen 370 SDGVLVSGGDNGSIMFWDWKSGHNYQRGQTI---------------------V-----QP----------------GSLE 407 (460)
T ss_pred cCceEEEcCCceEEEEEecCcCccccccccc---------------------c-----cC----------------Cccc
Confidence 9999999999999999999865321111000 0 00 0010
Q ss_pred CCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1522 CHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1522 ~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-...|.+. +|+..|..|+||..|.+|++||
T Consensus 408 -sEagI~as-~fDktg~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 408 -SEAGIFAS-CFDKTGSRLITGEADKTIKMYK 437 (460)
T ss_pred -cccceeEE-eecccCceEEeccCCcceEEEe
Confidence 23467777 7888899999999999999997
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-31 Score=309.22 Aligned_cols=248 Identities=20% Similarity=0.299 Sum_probs=193.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+..+.||.|+||.||+|++. +..|+||++...... ......+.+|+++++.++||||+++++++.+++..|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 77 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc---cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEE
Confidence 4788999999999999999885 367999988644211 12334577788999999999999999999999999999
Q ss_pred eccccCCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFFNSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+.++|.+++.. ...+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+.........
T Consensus 78 ~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~- 156 (284)
T cd07860 78 FEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT- 156 (284)
T ss_pred eeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc-
Confidence 99999999998855 345899999999999999999999999999999999999999999999999988654222110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhcCCCC-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYDP- 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~~~~~- 256 (1553)
.....+++.|+|||.+.+ ...++.++|||||||++|||++|.+||...... .+.+....+
T Consensus 157 ------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 221 (284)
T cd07860 157 ------YTHEVVTLWYRAPEILLG---------CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 221 (284)
T ss_pred ------cccccccccccCCeEEec---------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 122235678999997642 234578899999999999999999998643221 111100000
Q ss_pred ---------------------C---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 ---------------------S---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ---------------------~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. .......++.++++|.+||+.||.+||+++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 222 EVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0 00112345788999999999999999999999988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=302.69 Aligned_cols=245 Identities=15% Similarity=0.097 Sum_probs=191.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.++||+|+||.||+|++.+ ..|++|++.+... ..+.+.+|..+++.++||||+++++++.. ...|+||
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc------CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 69999999999999999998865 4699999865321 12356778899999999999999998754 4579999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ |+|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+.........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~- 158 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 158 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-
Confidence 9999 5999999753 35889999999999999999999999999999999999999999999999988754221110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcC-CCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~ 259 (1553)
......++..|+|||... ...++.++|||||||++|||++ |.+||............ ......
T Consensus 159 -----~~~~~~~~~~y~~PE~~~----------~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~ 223 (262)
T cd05071 159 -----ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 223 (262)
T ss_pred -----cccCCcccceecCHhHhc----------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCC
Confidence 111233466799999653 3467889999999999999999 68899654322221111 111111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.....++.+.++|.+||+.||++||+++++++-+
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l 257 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 257 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 2233467899999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=303.76 Aligned_cols=249 Identities=20% Similarity=0.160 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCC----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDK---- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~---- 98 (1553)
+|++.+.||.|+||.||+|.+.. ..+++|++.... .....+.+|..+++.+ .||||+++++++....
T Consensus 7 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE------DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred heeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc------hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 79999999999999999999854 569999986542 1234577888889988 6999999999986544
Q ss_pred --EEEEEecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 99 --AAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 99 --~~~lV~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
..|+||||++ ++|.+++.. +..+++.++..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999 599888754 346899999999999999999999999999999999999999999999999988
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHH
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYR 250 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~ 250 (1553)
........ ......++..|+|||.+..... ....++.++|||||||++|+|++|.+||.... .....
T Consensus 161 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~-----~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 228 (275)
T cd06608 161 AQLDSTLG-------RRNTFIGTPYWMAPEVIACDEQ-----PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF 228 (275)
T ss_pred eecccchh-------hhcCccccccccCHhHhccccc-----ccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence 65421111 1123346788999998753321 23467889999999999999999999986432 22222
Q ss_pred hcCCCCCCC--CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~~~~~~~--~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......... .+...+..++++|.+||..||++|||++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 229 KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 211111111 112245689999999999999999999999987
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=309.99 Aligned_cols=248 Identities=20% Similarity=0.259 Sum_probs=192.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|++.+.||.|+||.||+|.+. +..||+|++...... ......+.+|+.+++.++||||+++++++... +..|
T Consensus 8 ~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER---DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC---CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 7999999999999999999985 467999998654211 11122345677899999999999999998755 5689
Q ss_pred EEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||+.++|.+++.. +..+++.++..++.||+.||.|||++|++||||||+||+++.++.+||+|||.+.........
T Consensus 85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 164 (309)
T cd07845 85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP 164 (309)
T ss_pred EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC
Confidence 9999999999988865 356899999999999999999999999999999999999999999999999998765322110
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcC---
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQ--- 253 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~--- 253 (1553)
.....+++.|+|||.+.+ ...++.++||||+||++|||++|.+||........ ....
T Consensus 165 -------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~ 228 (309)
T cd07845 165 -------MTPKVVTLWYRAPELLLG---------CTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTP 228 (309)
T ss_pred -------CCcccccccccChhhhcC---------CCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 111224677999997642 23568899999999999999999999964432211 1100
Q ss_pred ----------------CCCC-CCC------CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ----------------YDPS-QHL------EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ----------------~~~~-~~~------~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+... ... ....++.+.++|.+||+.||++|||++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 229 NESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 000 01236788999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=302.71 Aligned_cols=251 Identities=15% Similarity=0.138 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|.+.. ..|++|++.+.. .......+..|..+++.++||||+++++++.++...
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 68999999999999999998753 249999985431 233456788899999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
++||||++ ++|.+++.. .+.+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 99999999 599999875 3568999999999999999999999999999999999999999999999999886542211
Q ss_pred CCCCCcceeeecCC--CCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-
Q 000410 179 DDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY- 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~- 254 (1553)
..+ . +..... .+..|+|||.+. ...++.++||||+||++|||++ |.+||.............
T Consensus 161 ~~~---~-~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~ 226 (269)
T cd05065 161 SDP---T-YTSSLGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ 226 (269)
T ss_pred ccc---c-cccccCCCcceeecCHhHhc----------cCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc
Confidence 111 1 111111 234699999764 3457889999999999999886 888886443322221111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
......+...+..+.+++.+||+.+|.+||++++++..+.
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 227 DYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111122234568999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=302.90 Aligned_cols=247 Identities=17% Similarity=0.176 Sum_probs=194.3
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
.+|++.+.||.|+||.||+|.+.+ ..|++|.+.... .....+.+.+|+.+++.++||||+++++++.++ .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~ 80 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT----SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-P 80 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC----CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-C
Confidence 478999999999999999998743 258889885432 134456778888999999999999999988764 5
Q ss_pred EEEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
.|+||||++ |+|.+++.... .+++..+..++.|++.||+|||++|++||||||+|||++.++.++|+|||+++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 789999998 69999997643 5899999999999999999999999999999999999999999999999988754221
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH----HHhc
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA----YRRG 252 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~----~~~~ 252 (1553)
. ........++..|+|||.+. ...++.++|||||||++|||++ |.+||....... +..+
T Consensus 161 ~------~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~ 224 (270)
T cd05056 161 S------YYKASKGKLPIKWMAPESIN----------FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG 224 (270)
T ss_pred c------ceecCCCCccccccChhhhc----------cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Confidence 0 01111222345799999653 3457889999999999999986 999996543222 2222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
... ..+...+..+.++|.+|+..+|++||++.++++.+..
T Consensus 225 ~~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~ 264 (270)
T cd05056 225 ERL---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD 264 (270)
T ss_pred CcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 211 2233446789999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=301.89 Aligned_cols=244 Identities=16% Similarity=0.146 Sum_probs=192.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.++||+|+||.||+|...+ ..||+|.+.... .. ...+.+|..+++.++||||+++++++. ++..|++|
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~--~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS--MS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCC--Cc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 78999999999999999998865 569999986432 11 235667888999999999999999874 45689999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++... ..+++.++..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+.........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc-
Confidence 9998 6999998653 35889999999999999999999999999999999999999999999999988654211110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHH---hcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR---RGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~---~~~~~~~ 257 (1553)
......++..|+|||.+. ...++.++|||||||++|||++ |++||......... .....
T Consensus 159 -----~~~~~~~~~~y~~pe~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-- 221 (260)
T cd05067 159 -----AREGAKFPIKWTAPEAIN----------YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR-- 221 (260)
T ss_pred -----cccCCcccccccCHHHhc----------cCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC--
Confidence 011223456799999764 3457889999999999999998 89999654332221 11111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...+...+..+.++|.+||..+|++||+++++++.++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 222 MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 1233445678999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=299.24 Aligned_cols=247 Identities=21% Similarity=0.259 Sum_probs=197.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.+|+++... +.|++|.+..... . ......+.+|+.+++.++||||++++++++..+..|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--S-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIV 77 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--C-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEE
Confidence 48899999999999999998853 6799999865421 1 22335677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||+. ++|.+++... ..+++.++..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||.+........
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 99998 5999998653 2478999999999999999999999999999999999999999999999998875422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc-CCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG-QYDPSQH 259 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~-~~~~~~~ 259 (1553)
......+++.|+|||.+. +..++.++|+||+||++|+|++|..||........... .......
T Consensus 157 ------~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08218 157 ------LARTCIGTPYYLSPEICE----------NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP 220 (256)
T ss_pred ------hhhhccCCccccCHHHhC----------CCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC
Confidence 111234677899999764 34567899999999999999999988875543322211 1111112
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...+..+.++|.+||+.+|++||++.++++|
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 221 VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 334456789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=306.35 Aligned_cols=244 Identities=18% Similarity=0.158 Sum_probs=197.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+. +..+++|.+.+... ......+.+|+++++.+.||||+++++.+..++..|++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN----EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC----hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEE
Confidence 5778899999999999999997 46799999866421 24456677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||++ ++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++.++|+|||.+.....+..
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 99999 6999999765 678999999999999999999999 9999999999999999999999999998865422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHh-cCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRR-GQY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~-~~~ 254 (1553)
....++..|+|||.+. +..++.++||||+||++|+|++|.+||... ......+ ...
T Consensus 157 --------~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 218 (265)
T cd06605 157 --------KTFVGTSSYMAPERIQ----------GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN 218 (265)
T ss_pred --------hcccCChhccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc
Confidence 0134677899999764 336788999999999999999998888543 2222211 111
Q ss_pred CCCCCCCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+..+. ..++.++++|.+||..||++||++.++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 219 EPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 11222222 256789999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=299.71 Aligned_cols=246 Identities=24% Similarity=0.235 Sum_probs=201.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|++|.||+|.+.+ +.|++|++..... ......+.+|...++.++||||+++++++..+...|+|
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD----EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIV 77 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc----hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEE
Confidence 68899999999999999999864 6799999866522 14556788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++.....+++..+..++.|++.||.|||+ +|++||||+|+||+++.++.++|+|||.+.........
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~- 156 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ- 156 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc-
Confidence 99999 6999999887789999999999999999999999 99999999999999999999999999988765322111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHHHH-hcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLAYR-RGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~~~-~~~~~~~ 257 (1553)
.....++..|+|||.+. ...++.++|+|||||++|+|++|.+||.... ..... .......
T Consensus 157 ------~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 220 (264)
T cd06623 157 ------CNTFVGTVTYMSPERIQ----------GESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP 220 (264)
T ss_pred ------ccceeecccccCHhhhC----------CCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC
Confidence 11234577899999764 2367889999999999999999999986542 22211 1111222
Q ss_pred CCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++.. .+..+.++|.+||..+|++||++++++++
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 223333 56789999999999999999999999997
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=308.58 Aligned_cols=244 Identities=18% Similarity=0.155 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+. +..||+|++.... .....+.+.+|+++++.++||||+++++++......|+|
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA----KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC----cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 6888999999999999999986 4569999886542 233456788889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++...+.+++..+..++.|++.||.|||+ +|++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 99999 5999999887779999999999999999999997 699999999999999999999999999876431111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-----------HHHH
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-----------LAYR 250 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-----------~~~~ 250 (1553)
.....++..|+|||.+. ...++.++||||+||++|+|++|.+||..... ....
T Consensus 159 ------~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd06620 159 ------ADTFVGTSTYMSPERIQ----------GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLL 222 (284)
T ss_pred ------cCccccCcccCCHHHHc----------cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHH
Confidence 11235788899999764 23677899999999999999999999964322 1111
Q ss_pred hcC-CCCCCCCCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQ-YDPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~-~~~~~~~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... ......++. ..+..+.+||.+||+.||++||+++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 223 QQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred HHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111 111111221 245689999999999999999999999987
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=300.66 Aligned_cols=247 Identities=21% Similarity=0.273 Sum_probs=197.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE--eCCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQE--TDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~--~~~~~~ 101 (1553)
+|++.+.||.|+||.||++.+.. +.+++|++..... .....+++..|+++++.++||||+++++++. .....|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM---TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEE
Confidence 48889999999999999998854 5699998865421 2334456778889999999999999998775 345689
Q ss_pred EEecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 102 LLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCH-----EKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH-----~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
++|||++ ++|.+++.. ...+++.++..++.||+.||.||| +.+++||||||+||+++.++.++|+|||++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999998 599998854 356899999999999999999999 999999999999999999999999999998
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR 251 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~ 251 (1553)
....... .......+++.|+|||.+. ...++.++|+||||+++|+|++|..||.......+.+
T Consensus 158 ~~~~~~~-------~~~~~~~~~~~~~~pE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 220 (265)
T cd08217 158 KILGHDS-------SFAKTYVGTPYYMSPEQLN----------HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLAS 220 (265)
T ss_pred ccccCCc-------ccccccccCCCccChhhhc----------CCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHH
Confidence 7653211 1122345788899999764 2347889999999999999999999997654333322
Q ss_pred cCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... ....++...+..+.+++.+||+.+|++||++.++++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 221 KIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 2111 1223444556789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=309.34 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=194.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.+.... ....+.+.+|.++++.++||||+++++++..++..|+|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD---KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc---chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE
Confidence 6889999999999999999986 367999998654221 23345567788999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ .|.++......+++.+++.++.||+.||.|||++|++||||+|+||++++++.++|+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 155 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--- 155 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc---
Confidence 999996 6666666555689999999999999999999999999999999999999999999999998875422211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh--cC---
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR--GQ--- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~--~~--- 253 (1553)
......++.+|+|||.+.+ ...++.++||||+||++|||++|.+||....... +.. +.
T Consensus 156 ----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07846 156 ----VYTDYVATRWYRAPELLVG---------DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIP 222 (286)
T ss_pred ----ccCcccceeeccCcHHhcc---------ccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCch
Confidence 1122345788999997742 2346788999999999999999999996433211 110 00
Q ss_pred ---------------CCCCC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ---------------YDPSQ-------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ---------------~~~~~-------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.. ......+..+.+|+.+||+.||++||++.++++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 223 RHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000 0011235679999999999999999999999988
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=298.70 Aligned_cols=245 Identities=17% Similarity=0.145 Sum_probs=192.3
Q ss_pred EEeeccCcEEEEEEEEC-CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-
Q 000410 31 EVLGGSRFFKSILCKHD-EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF- 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~-~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~- 108 (1553)
+.||.|+||.||+|.+. ++.|++|.+..... ......+..|+++++.++||||+++++++.+....|+||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP----PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 46899999999999986 46799998865421 2445678888899999999999999999999999999999998
Q ss_pred CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
++|.+++.. ...+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||.++...... +...
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-----~~~~ 151 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI-----YTVS 151 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCc-----ceec
Confidence 599999865 3458899999999999999999999999999999999999999999999999987542110 0000
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCCCCCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQHLEKIPD 265 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~ 265 (1553)
......+..|+|||.+. +..++.++|||||||++|||++ |.+||............. ......+...+
T Consensus 152 ~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (251)
T cd05041 152 DGLKQIPIKWTAPEALN----------YGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCP 221 (251)
T ss_pred cccCcceeccCChHhhc----------cCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCC
Confidence 01122345699999764 3457889999999999999999 688886543322221111 11112334456
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 266 SGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 266 ~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..+.+++.+||+.+|.+||+++|+++.+.
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 78999999999999999999999998764
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=298.92 Aligned_cols=249 Identities=18% Similarity=0.167 Sum_probs=197.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|.+. +..|++|.+..... ......+.+.+|+++++.++|+||+++++++..++..++|
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM--MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc--cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 6899999999999999999986 46799998864321 1123356678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++ ++|.+++.. ...+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 99999 599988853 3458999999999999999999999999999999999999999999999999876442111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHH----Hhc
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAY----RRG 252 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~----~~~ 252 (1553)
.. .....+++.|+|||.+. +..++.++|+||+||++|+|++|..||.... .... ..+
T Consensus 161 ~~-------~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T cd08224 161 TA-------AHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC 223 (267)
T ss_pred cc-------cceecCCccccCHHHhc----------cCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC
Confidence 10 11223577899999764 3457889999999999999999988885432 1111 222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...+ ......+..++++|.+||..+|++||++.++++.++.
T Consensus 224 ~~~~--~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 224 DYPP--LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred CCCC--CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 2211 1122445689999999999999999999999987653
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=300.72 Aligned_cols=245 Identities=18% Similarity=0.162 Sum_probs=195.2
Q ss_pred EEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 28 VLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 28 ~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
++.+.||.|+||.||+|.+.+ ..||+|++.... .....+.+..|...++.++||||+++++++.+.+..|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA----DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC----ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE
Confidence 567899999999999999875 569999985431 1224556778889999999999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
++|||++ ++|.+++..... +++.++..++.|++.||++||++|++||||||+||++++++.++|+|||.+.......
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999998 599999976543 8999999999999999999999999999999999999999999999999987653221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHh-cCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRR-GQYDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~-~~~~~ 256 (1553)
.. ......+++.|+|||.+. ...++.++||||+||++|+|++ |.+||.......+.. .....
T Consensus 158 ~~------~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~ 221 (258)
T smart00219 158 YY------KKKGGKLPIRWMAPESLK----------DGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY 221 (258)
T ss_pred cc------ccccCCCcccccChHHhc----------cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC
Confidence 10 001122567899999663 3457889999999999999998 689987544333221 11111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+...+..+.+++.+||..||++|||+.|+++.
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 122333456789999999999999999999999875
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-30 Score=305.99 Aligned_cols=252 Identities=21% Similarity=0.239 Sum_probs=198.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
+|++.+.||.|+||.||+|+.. +..||+|++.+... .......+.+.+|+.+++.+ +||||++++++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI-VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTK 79 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh-hhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCe
Confidence 4788999999999999999873 46699999865311 12223445667788899999 59999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.|+||||++ ++|.+++..+..+++.++..++.||+.||.|||++|++||||||+|||++.++.++|+|||++.......
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 999999999 5999999887789999999999999999999999999999999999999999999999999887542111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~ 254 (1553)
.. ......|+..|+|||.+.. ....++.++||||+||++|+|++|.+||... ....+.....
T Consensus 160 ~~------~~~~~~~~~~y~aPE~~~~--------~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~ 225 (290)
T cd05613 160 VE------RAYSFCGTIEYMAPDIVRG--------GDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL 225 (290)
T ss_pred cc------ccccccCCcccCChhhccC--------CCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh
Confidence 00 1112346788999997642 1234678899999999999999999998632 2222322222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
......+...++.+.+++.+||+.||++|| +++++++|
T Consensus 226 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 226 KSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 222233445567899999999999999997 88999987
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=302.68 Aligned_cols=234 Identities=18% Similarity=0.163 Sum_probs=183.3
Q ss_pred EEeeccCcEEEEEEEECC--------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe
Q 000410 31 EVLGGSRFFKSILCKHDE--------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET 96 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~ 96 (1553)
+.||+|+||.||+|+... ..|++|++... .......+.+|..+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-----HRDISLAFFETASMMRQVSHKHIVLLYGVCVR 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 468999999999997531 24788876432 23344567778889999999999999999999
Q ss_pred CCEEEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCc-------EEEee
Q 000410 97 DKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW-------LYLSD 167 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~-------vkL~D 167 (1553)
+...++||||++ |+|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 889999999999 588888764 356899999999999999999999999999999999999987664 89999
Q ss_pred cCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH-cCCCCCCchHH
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSHL 246 (1553)
Q Consensus 168 FG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl-tg~~pf~~~~~ 246 (1553)
||.+...... ....++..|+|||.+. ....++.++|||||||++|||+ .|.+||.....
T Consensus 156 ~g~~~~~~~~-----------~~~~~~~~y~aPE~~~---------~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (262)
T cd05077 156 PGIPITVLSR-----------QECVERIPWIAPECVE---------DSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL 215 (262)
T ss_pred CCCCccccCc-----------ccccccccccChhhhc---------CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence 9987644211 1233567799999763 1345788999999999999997 57888875443
Q ss_pred HHHH---hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 247 LAYR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 247 ~~~~---~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.... ..... .....++++++||.+||+.||++||++.++++++
T Consensus 216 ~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 216 AEKERFYEGQCM----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hHHHHHHhcCcc----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 3222 22211 1112246799999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=300.66 Aligned_cols=243 Identities=16% Similarity=0.117 Sum_probs=192.0
Q ss_pred EEeeccCcEEEEEEEECC---c--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHDE---G--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~---~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|.+.. . .||+|.+.... .....+.+.+|..++++++||||+++++++.. ...++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e 75 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDK----LSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTE 75 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcc----cHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEE
Confidence 468999999999998743 2 48999886542 11566778889999999999999999999988 88999999
Q ss_pred ccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 106 YFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|++ ++|.+++..+. .+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||+++.......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~--- 152 (257)
T cd05040 76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED--- 152 (257)
T ss_pred ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc---
Confidence 998 69999997654 589999999999999999999999999999999999999999999999999876532211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~~~ 258 (1553)
.........++..|+|||.+. ...++.++|||||||++|||++ |.+||........ ..... ...
T Consensus 153 -~~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~ 220 (257)
T cd05040 153 -HYVMEEHLKVPFAWCAPESLR----------TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-ERL 220 (257)
T ss_pred -ceecccCCCCCceecCHHHhc----------ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-CcC
Confidence 111111234567899999764 3457889999999999999998 9999854322221 11111 111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
..+...+..+.+++.+||+.+|++||++.++++.+
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 22334467899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=299.52 Aligned_cols=246 Identities=15% Similarity=0.128 Sum_probs=194.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||.|+||.||++.+. ++.+++|++.... .. ...+..|.++++.++||||++++++++.....|+||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~--~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA--MS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC--CC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 7899999999999999999886 4679999885431 11 234667888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||+. ++|.+++... +.+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--- 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--- 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc---
Confidence 9999 5999998653 4589999999999999999999999999999999999999999999999998865421110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCCC-CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYD-PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~~-~~~~~ 260 (1553)
. ......++..|+|||.+. ...++.++|||||||++|||++ |.+||.............. .....
T Consensus 156 --~-~~~~~~~~~~~~aPe~~~----------~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd05112 156 --T-SSTGTKFPVKWSSPEVFS----------FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK 222 (256)
T ss_pred --c-ccCCCccchhhcCHhHhc----------cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC
Confidence 0 011112346799999764 3457789999999999999998 8999975543322221111 11123
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...+..+.+|+.+||+.+|++||++.++++++
T Consensus 223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 345578999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=304.42 Aligned_cols=240 Identities=18% Similarity=0.221 Sum_probs=191.5
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|+||+||+|.+. +..|++|++.+.. .........+..|.++++.++||||++++++++..+..|+||||++ +
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKR--LKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhh--hhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCC
Confidence 699999999999875 4679999987542 1112234455678899999999999999999999999999999999 5
Q ss_pred CHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 110 SLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 110 sL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
+|.+++.... .+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+....... .
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--------~ 150 (277)
T cd05577 79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--------K 150 (277)
T ss_pred cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--------c
Confidence 9999987654 68999999999999999999999999999999999999999999999999876542110 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCCCCCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPSQHLEKI 263 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~~~~~~~ 263 (1553)
.....++..|+|||.+. +..++.++||||+||++|+|++|+.||..... ..+...........+..
T Consensus 151 ~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQ----------GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDK 220 (277)
T ss_pred cccccCCCCcCCHHHhc----------CCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCcc
Confidence 12234567899999764 23478899999999999999999999964322 22333322223334445
Q ss_pred CCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 264 PDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 264 ~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
.++.++++|.+||+.||.+|| ++.++++|
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 578999999999999999999 88889887
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2e-30 Score=304.02 Aligned_cols=250 Identities=19% Similarity=0.136 Sum_probs=192.9
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE------
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE------ 95 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~------ 95 (1553)
..|++.+.||.|+||.||+|++.. ..+|+|++.... .....+..|..+++.+ +||||+++++++.
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE------DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh------HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 378999999999999999999854 569999986531 2224466677788887 6999999999884
Q ss_pred eCCEEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
.....|++|||++ |+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 3467899999999 5999988653 348888899999999999999999999999999999999999999999999876
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHh
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRR 251 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~ 251 (1553)
........ .....+++.|+|||.+.... .....++.++|+|||||++|||++|.+||.... ...+..
T Consensus 170 ~~~~~~~~-------~~~~~~~~~y~aPE~l~~~~-----~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 170 QLDRTVGR-------RNTFIGTPYWMAPEVIACDE-----NPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred hhhccccC-------CCcccccccccCHhhcCccc-----CcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 54221111 12234678899999875321 124467889999999999999999998885332 222211
Q ss_pred cCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... .........+..+.++|.+||+.||.+||++.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 1111 1112223456789999999999999999999999988
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=331.67 Aligned_cols=253 Identities=18% Similarity=0.230 Sum_probs=191.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET------- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~------- 96 (1553)
+|+..+.||+||||.||+++.+ +..||||.+..+. .......+.+|+..|++|+|||||+||..+.+
T Consensus 480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~----s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA----SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch----HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 5666789999999999999985 5679999986652 34556678899999999999999999754310
Q ss_pred --------------------------------------------------------------------------------
Q 000410 97 -------------------------------------------------------------------------------- 96 (1553)
Q Consensus 97 -------------------------------------------------------------------------------- 96 (1553)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CEEEEEeccccC-CHHHHhcCCCCC-CHHHHHHHHHHHHHHHHHHHH
Q 000410 97 ------------------------D--------KAAYLLRQYFFN-SLRDRLSTPPFL-SLVEKKWLAFQLLLAVKQCHE 142 (1553)
Q Consensus 97 ------------------------~--------~~~~lV~E~~~g-sL~d~l~~~~~l-~~~~~~~i~~Qll~aL~~LH~ 142 (1553)
+ ..+||-||||+. .|.+++..+.+. ...+.+.+++||++||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 136899999995 566666666554 477889999999999999999
Q ss_pred CCCeecCCCCCcEEEecCCcEEEeecCcccccc------CC----C-CCCCCcceeeecCCCCccccCcchhcccCCccc
Q 000410 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTY------IP----Y-DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ 211 (1553)
Q Consensus 143 ~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~------~~----~-~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~ 211 (1553)
+|||||||||.||++++++.|||+|||+++... .. . ...+....-.+...||.-|+|||++.+..
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~---- 791 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS---- 791 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc----
Confidence 999999999999999999999999999998621 00 0 01111111234456889999999986432
Q ss_pred cccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000410 212 VAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 286 (1553)
Q Consensus 212 ~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa 286 (1553)
...|+.|+|+||||+|++||+. ||.-+ .+..++.+..+....+..-.-+.-..+|++||+.||++||||
T Consensus 792 ---~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA 865 (1351)
T KOG1035|consen 792 ---SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTA 865 (1351)
T ss_pred ---cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCH
Confidence 2479999999999999999994 36422 233445555543322232223456899999999999999999
Q ss_pred HHHHHh
Q 000410 287 ESYLQN 292 (1553)
Q Consensus 287 ~elL~~ 292 (1553)
.|+|+.
T Consensus 866 ~eLL~s 871 (1351)
T KOG1035|consen 866 TELLNS 871 (1351)
T ss_pred HHHhhc
Confidence 999986
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-30 Score=298.16 Aligned_cols=246 Identities=23% Similarity=0.287 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.... ..+++|.+..... . ......+.+|.++++.++||||+++++.+..++..++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM--T-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIV 77 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc--c-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEE
Confidence 48899999999999999998853 6699999875421 1 22346688889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCccccccCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~~ 179 (1553)
|||++ ++|.+++... ..+++.++..++.|++.||+|||++||+||||||+||+++.++ .++|+|||.+........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 99998 5999999763 3489999999999999999999999999999999999998654 689999999876532211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC-CCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ-YDPSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~-~~~~~ 258 (1553)
.....++..|+|||.+. ...++.++|+||+||++|+|++|..||...+........ .....
T Consensus 158 --------~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (256)
T cd08220 158 --------AYTVVGTPCYISPELCE----------GKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA 219 (256)
T ss_pred --------ccccccCCcccCchhcc----------CCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC
Confidence 11234677899999763 345678999999999999999999999765443322111 11122
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...++.++++|.+||..||++|||++|+++|
T Consensus 220 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 2334456789999999999999999999999988
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=303.03 Aligned_cols=243 Identities=15% Similarity=0.099 Sum_probs=187.2
Q ss_pred EEeeccCcEEEEEEEECC--c--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHDE--G--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|+..+ . .+++|.+... ......+.+..|+++++.+ +||||+++++++......|++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 76 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 76 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc----CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEE
Confidence 368999999999998854 2 3677877532 1223445677888899989 79999999999999999999999
Q ss_pred ccc-CCHHHHhcCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 106 YFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
|++ |+|.+++.... .+++.++.+++.|++.||+|||++|++||||||+|||++.++.+||+||
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCC
Confidence 998 69999986532 4789999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|++...... .. ......+..|+|||.+. ...++.++|||||||++|||++ |.+||......
T Consensus 157 gl~~~~~~~---~~-----~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~ 218 (270)
T cd05047 157 GLSRGQEVY---VK-----KTMGRLPVRWMAIESLN----------YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 218 (270)
T ss_pred CCccccchh---hh-----ccCCCCccccCChHHHc----------cCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH
Confidence 987532100 00 01112345699999763 3457889999999999999997 88898654332
Q ss_pred HHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 248 AYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 248 ~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...... .......+...+..+.+++.+||..||.+||+++++++.+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 219 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 221111 111112233456789999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-30 Score=305.30 Aligned_cols=247 Identities=19% Similarity=0.183 Sum_probs=196.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|...+.||+|+||.||+|.+. ++.|++|++..... ...+..+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc--CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 5889999999999999999885 46799999864421 2233445677888999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.|+|.+.+.. ...+++.++..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 94 ~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~----- 168 (307)
T cd06607 94 MEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA----- 168 (307)
T ss_pred HHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-----
Confidence 99999999888753 456899999999999999999999999999999999999999999999999988643111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-HhcCC-CCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-RRGQY-DPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-~~~~~-~~~~~~ 260 (1553)
....+++.|+|||.+... ....++.++||||+||++|||++|.+||........ ..... ......
T Consensus 169 ------~~~~~~~~y~aPE~~~~~-------~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (307)
T cd06607 169 ------NSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLS 235 (307)
T ss_pred ------CCccCCccccCceeeecc-------CCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCC
Confidence 123456789999977421 234578899999999999999999888865433221 11111 111111
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+..++++|.+||+.||++||++.++++|
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 236 SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 22345789999999999999999999999987
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.1e-31 Score=308.33 Aligned_cols=245 Identities=17% Similarity=0.112 Sum_probs=195.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|+..+.||+|+||.||+|.+.. ..||+|++.... .....+.+.+|+++++.++||||+++++++..+...|+|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc----chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE
Confidence 35667889999999999998753 569999886441 233456788889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ ++|.+++... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--- 156 (277)
T cd06642 81 MEYLGGGSALDLLKPG-PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--- 156 (277)
T ss_pred EEccCCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch---
Confidence 99999 5999988654 589999999999999999999999999999999999999999999999998865421110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC-CCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ-YDPSQHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~-~~~~~~~~ 261 (1553)
......++..|+|||.+. +..++.++|+|||||++|||++|.+||............ ......+.
T Consensus 157 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (277)
T cd06642 157 ----KRNTFVGTPFWMAPEVIK----------QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLE 222 (277)
T ss_pred ----hhhcccCcccccCHHHhC----------cCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCC
Confidence 111234677899999764 335678999999999999999999998643322211111 11122233
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+..+.++|.+||+.+|++||++.++++|
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 4456789999999999999999999999998
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-30 Score=302.13 Aligned_cols=250 Identities=16% Similarity=0.118 Sum_probs=196.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+. ++.++||.+.+... ........+.+|..+++.++||||+++++++..++..|++
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL--MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh--hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 6888999999999999999974 46799998865421 2233445677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++ ++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 99999 599988753 4558999999999999999999999999999999999999999999999999876432111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH--HHHHhcC--C
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL--LAYRRGQ--Y 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~--~~~~~~~--~ 254 (1553)
.......++..|+|||.+. ...++.++|+||+||++|+|++|..||..... ....+.. .
T Consensus 161 -------~~~~~~~~~~~~~ape~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T cd08229 161 -------TAAHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC 223 (267)
T ss_pred -------cccccccCCcCccCHHHhc----------CCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC
Confidence 0112334678899999764 33567899999999999999999888854322 1111111 1
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...+......++.++++|.+||..||++|||+.++++.++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 1111122345678999999999999999999999888654
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=314.76 Aligned_cols=248 Identities=17% Similarity=0.206 Sum_probs=190.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEe-
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQET- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~- 96 (1553)
+|++.+.||+|+||.||+|.+. ++.||||++.... .......+.+|..++..+ +||||+++++++..
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC----ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 7999999999999999999752 2569999986431 123345677788899999 68999999987754
Q ss_pred CCEEEEEecccc-CCHHHHhcCC---------------------------------------------------------
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP--------------------------------------------------------- 118 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~~--------------------------------------------------------- 118 (1553)
+...|++|||++ |+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 456899999999 6999988542
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceee
Q 000410 119 ----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFF 188 (1553)
Q Consensus 119 ----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~ 188 (1553)
..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----~~~~ 238 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRK 238 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-----hhhc
Confidence 1367788889999999999999999999999999999999999999999998875421110 0011
Q ss_pred ecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH----HHH-HHhcCCCCCCCCCC
Q 000410 189 DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLA-YRRGQYDPSQHLEK 262 (1553)
Q Consensus 189 ~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~-~~~~~~~~~~~~~~ 262 (1553)
....++..|+|||.+. ...++.++|||||||++|+|++ |.+||.... ... +..+. ....+.
T Consensus 239 ~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~ 305 (343)
T cd05103 239 GDARLPLKWMAPETIF----------DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---RMRAPD 305 (343)
T ss_pred CCCCCCcceECcHHhc----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC---CCCCCC
Confidence 2233456799999764 3457889999999999999997 788886432 111 11121 112233
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..++.+.+++.+||+.||++||++.|+++++..
T Consensus 306 ~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~ 338 (343)
T cd05103 306 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 338 (343)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 456789999999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=301.72 Aligned_cols=244 Identities=18% Similarity=0.160 Sum_probs=196.4
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|+..+.||+|+||.||+|.+. +..||+|++... ........+.+|+.+++.++||||+++++++..+...|+||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE----EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccc----cchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 677889999999999999875 367999988543 22334567888889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||++ ++|.+++... .+++.++..++.|++.||.+||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~l~~~i~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06641 82 EYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred EeCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch-----
Confidence 9999 5899888654 58999999999999999999999999999999999999999999999999886542111
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCCCCCCC
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPSQHLEK 262 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~~~~~~ 262 (1553)
.......++..|+|||.+. ....+.++|+||+||++|+|++|.+||............. ...+.+..
T Consensus 156 --~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (277)
T cd06641 156 --IKRNTFVGTPFWMAPEVIK----------QSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEG 223 (277)
T ss_pred --hhhccccCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCc
Confidence 0112234677899999764 2356788999999999999999999997543322221111 11223444
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+..+.++|.+||+.+|.+||++.++++|
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 556789999999999999999999999998
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=305.82 Aligned_cols=247 Identities=25% Similarity=0.351 Sum_probs=193.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|++|.||+|++. +..||+|++...... .....+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 76 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE----GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLV 76 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc----cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEE
Confidence 4889999999999999999985 356999998654221 1223455678899999999999999999999999999
Q ss_pred eccccCCHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFFNSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++++|.+++... ..+++..+..++.|++.||+|||++|++||||||+||++++++.++|+|||.+.....+..
T Consensus 77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 77 FEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred EecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 999999999988653 3589999999999999999999999999999999999999999999999998864422211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcC---
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ--- 253 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~--- 253 (1553)
......++..|+|||.+.+ ...++.++|||||||++|+|++|.+||....... +....
T Consensus 156 ------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd07836 156 ------TFSNEVVTLWYRAPDVLLG---------SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTP 220 (284)
T ss_pred ------ccccccccccccChHHhcC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 1122345778999998742 2346789999999999999999999996433211 10000
Q ss_pred -------------CCCC---------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -------------YDPS---------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -------------~~~~---------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+... ..+....+..++++|.+||+.||.+||+++++++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 221 TESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred ChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000 00111235678999999999999999999999987
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=303.27 Aligned_cols=245 Identities=15% Similarity=0.163 Sum_probs=190.1
Q ss_pred EEeeccCcEEEEEEEECC--------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 31 EVLGGSRFFKSILCKHDE--------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+.||+|+||.||+|++.+ ..+++|.+.+.. .......+.+|..+++.++||||+++++++......|+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 76 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA----TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYI 76 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc----chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEE
Confidence 368999999999998753 358999875431 12334567778899999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-----cEEEeecC
Q 000410 103 LRQYFF-NSLRDRLST-------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-----WLYLSDFA 169 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~-------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-----~vkL~DFG 169 (1553)
||||++ ++|.+++.. ...+++.++..++.||+.||.|||++|++||||||+||+++.++ .++|+|||
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999998 699999853 23478899999999999999999999999999999999999887 89999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA 248 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~ 248 (1553)
+++....... ........++..|+|||.+. ...++.++|||||||++|||++ |.+||.......
T Consensus 157 ~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~ 221 (269)
T cd05044 157 LARDIYKSDY-----YRKEGEGLLPVRWMAPESLL----------DGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE 221 (269)
T ss_pred cccccccccc-----cccCcccCCCccccCHHHHc----------cCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH
Confidence 9875532211 00112223457799999764 3457889999999999999998 899986443222
Q ss_pred HHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 249 YRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 249 ~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..... .......+...+..+.++|.+||..+|.+||+++++++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 222 VLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 22111 11111233344678999999999999999999999998753
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=294.22 Aligned_cols=249 Identities=21% Similarity=0.210 Sum_probs=202.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|++.+.||+|++|.||+|.+. +..|++|++...... ....+.+.+|..++++++||||+++++.+... ...+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS---EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc---hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEE
Confidence 4788899999999999999987 467999998665221 34566788899999999999999999999888 8999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+++||++ ++|.+++...+.+++.++..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+.........
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9999997 699999988778999999999999999999999999999999999999999999999999988765322110
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhcC-CCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRGQ-YDPS 257 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~~-~~~~ 257 (1553)
.......++..|+|||.+. ....+.++|||||||++|+|++|..||.... ........ ....
T Consensus 158 -----~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (260)
T cd06606 158 -----EGTGSVRGTPYWMAPEVIR----------GEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEP 222 (260)
T ss_pred -----ccccCCCCCccccCHhhhc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCC
Confidence 0122344678899999764 2347889999999999999999998986543 11111111 1122
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++...+..++++|.+||+.||++||++.++++|
T Consensus 223 ~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 223 PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 23444557899999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-31 Score=304.72 Aligned_cols=237 Identities=21% Similarity=0.228 Sum_probs=185.7
Q ss_pred EEeeccCcEEEEEEEECC---------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 31 EVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~---------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
+.||+|+||.||+|.+.. ..+++|.+.+. .....+.+.+|..+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch-----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcE
Confidence 468999999999998743 23777776432 2344556778888999999999999999999989999
Q ss_pred EEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCc--------EEEeecCcc
Q 000410 102 LLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW--------LYLSDFASF 171 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~--------vkL~DFG~a 171 (1553)
+||||++ |+|.+++..+ ..+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|||.+
T Consensus 76 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred EEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 9999999 6999999764 35899999999999999999999999999999999999987764 699999987
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHHHHH
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYR 250 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~~~~ 250 (1553)
..... .....+++.|+|||.+.. ...++.++|||||||++|||++| .+||.........
T Consensus 156 ~~~~~-----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~ 215 (258)
T cd05078 156 ITVLP-----------KEILLERIPWVPPECIEN---------PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL 215 (258)
T ss_pred cccCC-----------chhccccCCccCchhccC---------CCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH
Confidence 64321 112345678999997642 23468899999999999999999 6777644332211
Q ss_pred hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 251 RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 251 ~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.. ......++...+..+.++|.+||+.||++|||++++++.+
T Consensus 216 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 216 QF-YEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HH-HHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11 1111223334457899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=313.46 Aligned_cols=248 Identities=22% Similarity=0.291 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC-----C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD-----K 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~-----~ 98 (1553)
+|.+.+.||.|+||.||+|++. +..||||.+..... .......+.+|+.+++.++||||+++++++... .
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD---NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc---ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 6899999999999999999985 36799999865321 112234456788899999999999999887544 3
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|+|+||+.++|.+++...+.+++.++..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred cEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 58999999999999999888889999999999999999999999999999999999999999999999999987653221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----------
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA---------- 248 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~---------- 248 (1553)
.......++..|+|||.+.. ...++.++|||||||++|+|++|.+||...+...
T Consensus 163 -------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 226 (337)
T cd07858 163 -------DFMTEYVVTRWYRAPELLLN---------CSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLG 226 (337)
T ss_pred -------ccccccccccCccChHHHhc---------CCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhC
Confidence 11123346788999998742 1247889999999999999999999996532110
Q ss_pred -----------------HHhcC-CCCC---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -----------------YRRGQ-YDPS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -----------------~~~~~-~~~~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+.. .... .......++.++++|.+||+.||++|||++++++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 227 SPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000 0000 01112345679999999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3e-30 Score=300.46 Aligned_cols=250 Identities=19% Similarity=0.195 Sum_probs=186.2
Q ss_pred EEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 31 EVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
+.||+|+||.||+|...+ ..+++|.+.... . ......+.+|..+++.++||||+++++++.+....|+||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~---~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 76 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA---S-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEF 76 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC---C-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEEC
Confidence 368999999999998643 358888775432 1 22334677788999999999999999999988899999999
Q ss_pred cc-CCHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 107 FF-NSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 107 ~~-gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
++ |+|.+++... ..+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~--- 153 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE--- 153 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc---
Confidence 99 6999998642 23567778889999999999999999999999999999999999999999988643111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HH--hcCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YR--RGQY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~--~~~~ 254 (1553)
..........++..|+|||.+...... .....++.++||||+||++|||++ |.+||....... +. ....
T Consensus 154 --~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (269)
T cd05087 154 --DYYVTPDQLWVPLRWIAPELVDEVHGN---LLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQL 228 (269)
T ss_pred --ceeecCCCcCCcccccCHhHhcccccc---ccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccC
Confidence 111111233457789999987532111 112246889999999999999996 998986432221 11 1111
Q ss_pred C-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 D-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 ~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. +.+.+....++.+.+++.+|+ .+|++|||++|+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 229 KLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred CCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 1 222233345678999999998 6899999999999764
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-30 Score=301.30 Aligned_cols=249 Identities=20% Similarity=0.188 Sum_probs=189.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--D 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~ 97 (1553)
+|++.+.||+|+||.||+|... +..|++|.+... .....+.+.+|+++++.++||||+++++++.. .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-----TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC-----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 7899999999999999999753 356999998543 12334567888899999999999999987643 3
Q ss_pred CEEEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
...|+||||++ ++|.+++.. +..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 56899999998 699999965 3568999999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-------
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA------- 248 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~------- 248 (1553)
.... .........++..|+|||.+. +..++.++|||||||++|||++|..++.......
T Consensus 160 ~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd05081 160 QDKE----YYKVREPGESPIFWYAPESLT----------ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGND 225 (284)
T ss_pred CCCc----ceeecCCCCCceEeeCHHHhc----------cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccc
Confidence 2111 101111122345699999764 3457889999999999999999855543211110
Q ss_pred ------------HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 249 ------------YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 249 ------------~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...... ....+...+..+.+||.+||..+|++|||+.|+++.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 226 KQGQMIVYHLIELLKNNG--RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred cccccchHHHHHHHhcCC--cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 011110 111223345789999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=306.05 Aligned_cols=247 Identities=20% Similarity=0.295 Sum_probs=193.9
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||.|++|.||+|.+. +..|++|++...... ......+.+|+++++.++|||++++++++.++...|++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~ 77 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED---EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVF 77 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc---ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEE
Confidence 567899999999999999875 467999998654211 223345667888999999999999999999999999999
Q ss_pred ccccCCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||++++|.+++...+ .+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||.+.....+...
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~-- 155 (283)
T cd07835 78 EFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT-- 155 (283)
T ss_pred eccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc--
Confidence 999999999997765 6899999999999999999999999999999999999999999999999998654222111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhcC-----
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQ----- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~~----- 253 (1553)
.....+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||...... .+.+..
T Consensus 156 -----~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 221 (283)
T cd07835 156 -----YTHEVVTLWYRAPEILLG---------SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDE 221 (283)
T ss_pred -----cCccccccCCCCCceeec---------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 112235778999997642 234678999999999999999999998643221 111100
Q ss_pred ---------------C-----CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ---------------Y-----DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ---------------~-----~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+ ..........+..+.++|.+||+.||++||+++|+++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 222 DVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred HHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00001112334689999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=303.29 Aligned_cols=233 Identities=17% Similarity=0.161 Sum_probs=182.1
Q ss_pred EeeccCcEEEEEEEECC--------------------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCC
Q 000410 32 VLGGSRFFKSILCKHDE--------------------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~--------------------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hp 85 (1553)
.||+|+||.||+|.... ..|++|++... .......+.+|..+++.++||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~ 76 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-----HRDIALAFFETASLMSQVSHI 76 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-----HHHHHHHHHHHHHHHhcCCCC
Confidence 69999999999997411 23788887432 233445677788899999999
Q ss_pred CeeEEEEEEEeCCEEEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC--
Q 000410 86 HVWAFQFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-- 161 (1553)
Q Consensus 86 nIv~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-- 161 (1553)
||+++++++..+...|+||||++ |+|.+++.. ++.+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 77 niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 77 HLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred CeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcc
Confidence 99999999999999999999999 589888864 56789999999999999999999999999999999999998654
Q ss_pred -----cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH-
Q 000410 162 -----WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF- 235 (1553)
Q Consensus 162 -----~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl- 235 (1553)
.++|+|||.+...... ....++..|+|||.+.+ ...++.++|||||||++|||+
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~---------~~~~~~~~Dv~slG~~l~el~~ 216 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPG---------GNSLSTAADKWSFGTTLLEICF 216 (274)
T ss_pred cCccceeeecCCccccccccc-----------cccccCCcccCchhhcC---------CCCCCcHHHHHHHHHHHHHHHh
Confidence 4899999987543111 11235677999997642 245788999999999999995
Q ss_pred cCCCCCCchHHH---HHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 236 LEVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 236 tg~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+|.+||...... .+..... ..+....+.+.++|.+||+.+|++||++.++++++
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 217 DGEVPLKERTPSEKERFYEKKH----RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred CCCCCccccChHHHHHHHHhcc----CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 678888643322 1211111 12222346799999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=306.40 Aligned_cols=248 Identities=21% Similarity=0.265 Sum_probs=189.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCE---
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKA--- 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~--- 99 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++...... ......+.+|+.+++.+. ||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 78 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE---EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK 78 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc---cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence 6889999999999999999985 357999987654211 112345667778899885 6999999998876655
Q ss_pred --EEEEeccccCCHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCcc
Q 000410 100 --AYLLRQYFFNSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASF 171 (1553)
Q Consensus 100 --~~lV~E~~~gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a 171 (1553)
.|+||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|+|||.+
T Consensus 79 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 79 PSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred ceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999999999988532 34799999999999999999999999999999999999998 889999999988
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HH--
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LA-- 248 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~-- 248 (1553)
.....+... .....+++.|+|||.+.+ ...++.++||||+||++|+|++|.+||..... ..
T Consensus 159 ~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~ 222 (295)
T cd07837 159 RAFSIPVKS-------YTHEIVTLWYRAPEVLLG---------STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLL 222 (295)
T ss_pred eecCCCccc-------cCCcccccCCCChHHhhC---------CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 755322111 011235678999997642 23568899999999999999999989864321 11
Q ss_pred -HHhcCCCC-C-----------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -YRRGQYDP-S-----------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -~~~~~~~~-~-----------------------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+......+ . .......++.+.++|.+||..||.+||+++|++.|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 223 HIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred HHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 11100000 0 00011245689999999999999999999999998
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=301.50 Aligned_cols=248 Identities=18% Similarity=0.150 Sum_probs=190.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD----- 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~----- 97 (1553)
+|.+.+.||+|+||.||++...+ ..+|+|++.... .....+.+|..+++.+ +||||+++++++...
T Consensus 23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~------~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS------DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc------cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 79999999999999999999853 569999985431 1234456677788888 799999999988643
Q ss_pred CEEEEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
...|+||||++ ++|.+++. ....+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||.+.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 36899999998 59998875 23468999999999999999999999999999999999999999999999999887
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HH---
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LA--- 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~--- 248 (1553)
....... ......++..|+|||.+.... .....++.++||||+||++|||++|++||..... ..
T Consensus 177 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 177 QLTSTRL-------RRNTSVGTPFWMAPEVIACEQ-----QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred hcccccc-------cccCccCCccccChhhhcCCC-----CcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 5421111 112234678899999875321 1123468899999999999999999988864322 22
Q ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+..... ...+......+.++|.+||+.||++||++.|+++|
T Consensus 245 ~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 245 IPRNPPPT-LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HhcCCCCC-CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 22221111 11122234679999999999999999999999998
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=293.89 Aligned_cols=247 Identities=22% Similarity=0.256 Sum_probs=201.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|++|.||++.+.. ..|++|.+.+.... +.....+.+|+++++.+.|||++++++++.+....|++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK---EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYII 77 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC---HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEE
Confidence 47889999999999999998853 57999999765221 34556788899999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ +|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+.........
T Consensus 78 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 155 (254)
T cd06627 78 LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-- 155 (254)
T ss_pred EecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--
Confidence 999994 99999988778999999999999999999999999999999999999999999999999988755322111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-HHHHHHhcCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-HLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-~~~~~~~~~~~~~~~~~ 261 (1553)
.....++..|+|||.+. ...++.++||||+|+++|+|++|.+||... ....+..........++
T Consensus 156 -----~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
T cd06627 156 -----DASVVGTPYWMAPEVIE----------MSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLP 220 (254)
T ss_pred -----ccccccchhhcCHhhhc----------CCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCC
Confidence 12234577899999653 234678999999999999999998888533 22222222222223344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...++.++++|.+||..+|++||++.+++.+
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 221 EGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 5556789999999999999999999999987
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=314.09 Aligned_cols=250 Identities=18% Similarity=0.191 Sum_probs=201.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--c---e-EEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G---L-VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~---~-vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
+..+.++||+|+||.||+|+... + . ||+|..... ....++...++.+|++++++++||||+++||+...+..
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~--~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS--SELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeeccc--ccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 56677999999999999998743 2 3 788877532 22346667788999999999999999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~-l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
+|||||+|. |+|.++|.+.+. ++..++.+++.|.+.||+|||+++++||||-.+|+|++.++.+||+|||+++...
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~-- 313 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS-- 313 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc--
Confidence 999999999 599999998874 9999999999999999999999999999999999999999999999999987442
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcC-CC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YD 255 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~ 255 (1553)
.+........-...|+|||.+. ...|++++||||+||++||+++ |..||.+-+....+... ..
T Consensus 314 -----~~~~~~~~~klPirWLAPEtl~----------~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~ 378 (474)
T KOG0194|consen 314 -----QYVMKKFLKKLPIRWLAPETLN----------TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN 378 (474)
T ss_pred -----ceeeccccccCcceecChhhhc----------cCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc
Confidence 0000000112345699999663 4489999999999999999999 67788776655544333 11
Q ss_pred -CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 256 -PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 256 -~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.....+...+..+..++.+|+..||++||++.++.+.+.
T Consensus 379 ~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 379 GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 112244456678999999999999999999999998754
|
|
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=298.60 Aligned_cols=246 Identities=14% Similarity=0.092 Sum_probs=191.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|.+.+.||+|+||.||+|.+.+ ..+++|.+.... ...+.+.+|+.+++.++|||++++++++.. ...|++|
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT------MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC------ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEE
Confidence 68999999999999999998866 469999875431 123456778899999999999999988754 5688999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++++++.++|+|||.+.........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-
Confidence 9999 5999999653 34789999999999999999999999999999999999999999999999998654221110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH-HhcCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~ 259 (1553)
......++..|+|||... ...++.++|||||||++|||++ |.+||........ ..........
T Consensus 159 -----~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 223 (260)
T cd05069 159 -----ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMP 223 (260)
T ss_pred -----ccCCCccchhhCCHHHhc----------cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 011223456799999653 3467889999999999999999 7999965432221 1111111112
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...+..+++++.+||..||++||+++++++-++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 23345678999999999999999999999998654
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=299.09 Aligned_cols=248 Identities=13% Similarity=0.112 Sum_probs=187.0
Q ss_pred EEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE-eCCEEEEEe
Q 000410 31 EVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQE-TDKAAYLLR 104 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~-~~~~~~lV~ 104 (1553)
+.||+|+||.||+|.+.+ ..+|+|.+.... .....+.+.+|..+++.++||||+++++++. .++..|++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT----DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC----CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEE
Confidence 368999999999998632 358999874321 1233456677888999999999999999764 456689999
Q ss_pred cccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||+. |+|.+++... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~- 155 (262)
T cd05058 77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS- 155 (262)
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCccee-
Confidence 9999 6999999764 346788889999999999999999999999999999999999999999999987543211000
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHHHHHhcCCC-CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYD-PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~~~~~~~~~-~~~~~ 260 (1553)
........++..|+|||.+. ...++.++|||||||++|||++| .+||.............. .....
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (262)
T cd05058 156 --VHNHTGAKLPVKWMALESLQ----------TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQ 223 (262)
T ss_pred --ecccccCcCCccccChhHhc----------cCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 00011223456799999764 34578899999999999999995 888865443332221111 11112
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
+...++.+.+++.+||..+|++||++.++++.+..
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 33345789999999999999999999999998653
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=306.10 Aligned_cols=244 Identities=20% Similarity=0.207 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|.....||.|+||.||++.+. +..||||.+... .....+.+.+|..+++.++||||+++++.+...+..|+|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR-----KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc-----hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEE
Confidence 3455678999999999999875 467999988543 123445577888899999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ +|.+++.. +.+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 98 ~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--- 173 (292)
T cd06658 98 MEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--- 173 (292)
T ss_pred EeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc---
Confidence 999984 88888754 4589999999999999999999999999999999999999999999999998864321111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-H--hcCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-R--RGQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-~--~~~~~~~~~ 259 (1553)
......++..|+|||.+. ...++.++||||+||++|||++|..||........ . .........
T Consensus 174 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T cd06658 174 ----KRKSLVGTPYWMAPEVIS----------RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVK 239 (292)
T ss_pred ----cCceeecCccccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccc
Confidence 011234678899999764 33567899999999999999999888865433221 1 112222211
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+..+.+++.+||..||.+|||++++++|
T Consensus 240 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 222346789999999999999999999999998
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=301.29 Aligned_cols=246 Identities=19% Similarity=0.165 Sum_probs=194.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC---CCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID---HPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~---hpnIv~~~~~~~~~~~~ 100 (1553)
.|++.+.||+|+||.||+|.+. +..|++|++...... .....+.+|..+++.+. ||||+++++++..+...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~ 77 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD----DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRL 77 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc----hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEE
Confidence 4677899999999999999985 367999998654221 22345666777777775 99999999999999999
Q ss_pred EEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
|+||||++ ++|.+++... .+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||.+........
T Consensus 78 ~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred EEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 99999998 5999998765 689999999999999999999999999999999999999999999999998875532211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC-CCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD-PSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~-~~~ 258 (1553)
. .....|+..|+|||.+.. +..++.++|+|||||++|+|++|.+||.............. ..+
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 220 (277)
T cd06917 157 K-------RSTFVGTPYWMAPEVITE---------GKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPP 220 (277)
T ss_pred c-------cccccCCcceeCHHHhcc---------CCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCC
Confidence 0 112346778999997642 23568899999999999999999999976554333221111 111
Q ss_pred CCCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+.. ..+..+.+++.+||+.||++||++.+++++
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 221 RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 2222 245789999999999999999999999987
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=297.06 Aligned_cols=243 Identities=19% Similarity=0.190 Sum_probs=203.2
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~ 101 (1553)
-+|.++.+||.|+||+|.+|..++ +.+|||++.|.-...+ +..+-. ..|.++|... +-|.+++++.+|++-+.+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQd-DDvect-m~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQD-DDVECT-MVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeec-Ccccce-ehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 378899999999999999998876 5699999987621111 111111 1233455544 4678899999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||+. |+|--.|++-+.+.+..+..++..|+-||-+||++||+.||||.+|||++.+|++||+|||+++....+.
T Consensus 427 FVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~-- 504 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG-- 504 (683)
T ss_pred eEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCC--
Confidence 9999999 5999999998999999999999999999999999999999999999999999999999999998643222
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHL 260 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~ 260 (1553)
....+.+|||.|+|||++. ..+|+.++|.||+|++||||+.|+|||++++...+.+.+.+.....
T Consensus 505 -----~TTkTFCGTPdYiAPEIi~----------YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsy 569 (683)
T KOG0696|consen 505 -----VTTKTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSY 569 (683)
T ss_pred -----cceeeecCCCcccccceEE----------ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcC
Confidence 1235778999999999764 4589999999999999999999999999988777766666656667
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCH
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSA 286 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa 286 (1553)
++..+.+..+++...|.+.|.+|..+
T Consensus 570 PKslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 570 PKSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred cccccHHHHHHHHHHhhcCCccccCC
Confidence 88888999999999999999999865
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=296.54 Aligned_cols=244 Identities=14% Similarity=0.122 Sum_probs=192.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|.+.+.||+|+||.||++...+ ..+++|.+... ......+.+|.++++.++|+||+++++++.. ...|++|
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG------SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCC------hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 79999999999999999998755 55999987542 1234567778899999999999999999877 7789999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++.+. ..+++.++..++.||+.||.|||++|++||||||+||+++..+.++|+|||.+........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 157 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-- 157 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc--
Confidence 9998 6999999753 3578889999999999999999999999999999999999999999999998865421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHH---hcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR---RGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~---~~~~~~~ 257 (1553)
.......++..|+|||.+. ...++.++|+|||||++|++++ |.+||......... ...+..
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~- 222 (260)
T cd05073 158 ----TAREGAKFPIKWTAPEAIN----------FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM- 222 (260)
T ss_pred ----ccccCCcccccccCHhHhc----------cCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC-
Confidence 0011122345699999764 3457889999999999999998 89999754332222 122211
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
......+..+.+++.+||+.||++||++.++++.+.
T Consensus 223 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 223 -PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred -CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 122344578999999999999999999999987653
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=302.06 Aligned_cols=257 Identities=14% Similarity=0.122 Sum_probs=185.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc-----eEEEEEEeccCCCcCHHHH------HHHHHHHHHHHhcCCCCCeeEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-----LVLVKVYFKRGDYIDLREY------ERRLFHIRETFRSIDHPHVWAFQFWQ 94 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~-----~vavKv~~~~~~~~~~~~~------~~~l~~e~~~l~~l~hpnIv~~~~~~ 94 (1553)
+|++.+.||+|+||+||+|.+.+. .+++|+..........+.. ......+...+..+.|+||+++++..
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 799999999999999999997643 4677765433222111111 11112223445677899999999876
Q ss_pred EeCC----EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 95 ETDK----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 95 ~~~~----~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
.... ..|+++|++..++.+.+......++..++.|+.|++.||+|||++||+||||||+|||++.++.++|+|||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGl 172 (294)
T PHA02882 93 SFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGI 172 (294)
T ss_pred eEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCC
Confidence 5443 457899998888888877655568888999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----H
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----L 246 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~ 246 (1553)
++....................||+.|+|||.+. +..++.++|||||||++|||++|.+||.... .
T Consensus 173 a~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~----------~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 173 ASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN----------GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred ceeeccCCcccccccccccccCCCccccCHHHhC----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 8765322111100011112345899999999654 4467899999999999999999999996431 1
Q ss_pred HH-----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 247 LA-----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 247 ~~-----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.. +...........+ ..++.+.+++..|+..+|++||+++++++-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 243 IHAAKCDFIKRLHEGKIKIK-NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhHHHHHHHhhhhhhccC-CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11 1111111111122 2357899999999999999999999998753
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=305.19 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+.+ ..|++|++..... .......+.+|.++++.++||||+++++++..++..|++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED---DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc---cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEE
Confidence 68999999999999999999864 5699999865421 233456678888999999999999999999999999999
Q ss_pred eccccCCHH-HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLR-DRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~-d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++++. .++.....+++.++..++.||+.||.|||++|++||||||+||+++.++.++|+|||.+........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--- 155 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA--- 155 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc---
Confidence 999997554 4455556699999999999999999999999999999999999999999999999999876532221
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh-------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR------- 251 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~------- 251 (1553)
.......++..|+|||.+.. ...++.++||||+||++|+|++|.+||....... ...
T Consensus 156 ---~~~~~~~~~~~~~~PE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (288)
T cd07833 156 ---SPLTDYVATRWYRAPELLVG---------DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPP 223 (288)
T ss_pred ---ccccCcccccCCcCCchhcC---------CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 01122345778999998742 1257889999999999999999999986432211 100
Q ss_pred ---------cCCCC----C--------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ---------GQYDP----S--------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ---------~~~~~----~--------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.. . ...+...+..++++|.+||..||++||+++++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 224 SHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred HHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 0 01122336789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.4e-30 Score=292.89 Aligned_cols=243 Identities=21% Similarity=0.249 Sum_probs=197.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|++|.||++.+. +..+++|++..... .....+.+|.++++.++||||+++++++..+...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 4788999999999999999986 46699999865421 3456778888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
+||++ ++|.+++... ..+++.++..++.|++.||.+||++|++||||+|+||+++.++.++|+|||.+........
T Consensus 76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 99999 6999999776 5699999999999999999999999999999999999999999999999998875532211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHH-HhcCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAY-RRGQYDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~-~~~~~~~~~~ 259 (1553)
.....++..|+|||.+. ...++.++|+||+||++|+|++|.+||..... ... .... .....
T Consensus 154 ------~~~~~~~~~~~~PE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~ 216 (253)
T cd05122 154 ------RNTMVGTPYWMAPEVIN----------GKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPG 216 (253)
T ss_pred ------ccceecCCcccCHHHHc----------CCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCC
Confidence 12334677899999764 23478899999999999999999988865421 111 1111 11111
Q ss_pred CCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... ..+..+.++|.+||+.||++|||+.++++|
T Consensus 217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 217 LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 221 226789999999999999999999999987
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=304.20 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=192.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|.+.. ..||+|.+...... ......+.+|.++++.++||||+++++++.++...|+|
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED---EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc---ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 68999999999999999999863 56999988654211 22334566788999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCCCCC
Q 000410 104 RQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++++|.+.+...+. +++..+..++.||+.||+|||++|++||||||+||+++. ++.+||+|||++........
T Consensus 80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~- 158 (294)
T PLN00009 80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR- 158 (294)
T ss_pred EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc-
Confidence 99999999998865443 578888899999999999999999999999999999985 45799999998865422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh---cCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR---GQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~---~~~~~ 256 (1553)
......+++.|+|||.+.+ ...++.++||||+||++|+|++|.+||..... ..+.+ ....+
T Consensus 159 ------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~ 223 (294)
T PLN00009 159 ------TFTHEVVTLWYRAPEILLG---------SRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTP 223 (294)
T ss_pred ------ccccCceeecccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 1122345788999997642 23578899999999999999999999964321 11110 00000
Q ss_pred -C----------------C--------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 -S----------------Q--------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 -~----------------~--------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. + ......++.+.++|.+||+.||++||+++++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 224 NEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred ChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0 0111235678999999999999999999999997
|
|
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=296.50 Aligned_cols=244 Identities=22% Similarity=0.251 Sum_probs=192.1
Q ss_pred EEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 29 LKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 29 ~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
....||+|+||.||+|++.+ ..|++|.+.... ....+.+.+|+.+++.++||||+++++++..+...|+|+||
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCC-----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence 44689999999999998754 469999875431 23345678888999999999999999999999999999999
Q ss_pred cc-CCHHHHhcCC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCCCCCC
Q 000410 107 FF-NSLRDRLSTP-PFL--SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 107 ~~-gsL~d~l~~~-~~l--~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
++ ++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||.+...... +.
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~--~~ 164 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI--NP 164 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC--CC
Confidence 98 5999998754 345 78889999999999999999999999999999999986 679999999988644211 11
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHHHHhcCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLAYRRGQYDPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~~~~~~~~~~~ 258 (1553)
. .....+++.|+|||.+... ...++.++|+||+|+++|+|++|.+||.... ............+
T Consensus 165 ~-----~~~~~~~~~~~aPE~~~~~--------~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 231 (268)
T cd06624 165 C-----TETFTGTLQYMAPEVIDKG--------PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP 231 (268)
T ss_pred c-----cccCCCCccccChhhhccc--------cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCC
Confidence 0 1122367889999977421 2346789999999999999999999986422 1122222222233
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...++.+++++.+||+.+|.+||++.|+++|
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 3455566789999999999999999999999998
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=298.73 Aligned_cols=247 Identities=17% Similarity=0.254 Sum_probs=201.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|..-++||+|+||.||-|+.. ++.+|+|.+.|+.. ....-+..-..|..+|..++.+.||.+--.|++.+.+++|
T Consensus 186 ~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRi--Kkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 186 TFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRI--KKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHH--HHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 5778899999999999999775 45699998876521 2223344456778899999999999999899999999999
Q ss_pred ecccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+..|. |+|.-+|...+ .+++.+++.++.+|+.||++||+.+||+||+||+|||+|+.|++.|+|+|+|..+ ++..
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei--~~g~ 341 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEI--PEGK 341 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEec--CCCC
Confidence 99999 59988886644 6999999999999999999999999999999999999999999999999999755 2222
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~~ 256 (1553)
+ .....||.+|||||++. ...|+...|.|||||+||||+.|+.||.... ...+.+.....
T Consensus 342 ~------~~~rvGT~GYMAPEvl~----------ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~ 405 (591)
T KOG0986|consen 342 P------IRGRVGTVGYMAPEVLQ----------NEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED 405 (591)
T ss_pred c------cccccCcccccCHHHHc----------CCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc
Confidence 2 23447899999999764 4458999999999999999999999996432 12233333344
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
...++...++++++|.+.+|.+||.+|. +++++.+|
T Consensus 406 ~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 406 PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 4456667788999999999999999998 45677777
|
|
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-30 Score=294.98 Aligned_cols=247 Identities=22% Similarity=0.241 Sum_probs=202.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||.|+||.||++.+. +..+++|++..... .......+.+|.++++.++|||++++++.+......++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv 77 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM---SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIV 77 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC---ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEE
Confidence 4888999999999999999997 46799999865421 134455677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+||++ ++|.+++... ..+++.++..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999 4999999763 669999999999999999999999999999999999999999999999999887542221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPS 257 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~ 257 (1553)
.......+++.|+|||.+. ...++.++|+||+|+++++|++|.+||.......+..... ...
T Consensus 158 -------~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 220 (258)
T cd08215 158 -------DLAKTVVGTPYYLSPELCQ----------NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY 220 (258)
T ss_pred -------ceecceeeeecccChhHhc----------cCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC
Confidence 1223345778899999764 3357789999999999999999999997665443332211 122
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++...+..+.+++.+||..+|++||++.++|+|
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 23444566789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=303.15 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=195.9
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEEE
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAYL 102 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~l 102 (1553)
|++.+.||+|+||.||+|.+.+ ..+++|++.... ........+.+|.++++.++|||++++++++..+ +..|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN---EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc---ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEE
Confidence 5788999999999999999865 569999997652 1233445567788899999999999999999888 88999
Q ss_pred EeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|+||++++|.+++... ..+++.++..++.||+.||+|||++|++|+||||+||++++++.++|+|||.+.........
T Consensus 78 v~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~- 156 (287)
T cd07840 78 VFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA- 156 (287)
T ss_pred EeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-
Confidence 9999999999998765 56899999999999999999999999999999999999999999999999998765333210
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCC-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDP- 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~- 256 (1553)
......++..|+|||.+.+ ...++.++|||||||++|||++|.+||........ ......+
T Consensus 157 -----~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd07840 157 -----DYTNRVITLWYRPPELLLG---------ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPT 222 (287)
T ss_pred -----cccccccccccCCceeeEc---------cccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCc
Confidence 1122235677999997642 23468899999999999999999999964432211 1100000
Q ss_pred C--------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 S--------------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~--------------------------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. ..+....++.+.++|.+||+.||.+||++++++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 223 DENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 00111226788999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-32 Score=309.50 Aligned_cols=255 Identities=20% Similarity=0.178 Sum_probs=211.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECCce--EEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGL--VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~--vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+++.+..||-|+||.|-+++.+... +|+|+++|.... ....++.+..|+.+|..+..|.|+++|..|.+++++|+.
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIV--dtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIV--DTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhcc--chhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 6777889999999999999887654 899999877432 223445677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||-|- |.|+..++.++.+.+...+.++.-+++|++|||++|||+|||||||.|++.+|++||.|||+||.+....
T Consensus 499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---- 574 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---- 574 (732)
T ss_pred HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC----
Confidence 99998 6999999999999999999999999999999999999999999999999999999999999999774322
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC--CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD--PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~--~~~~~ 260 (1553)
..-|.+|||.|.|||++.+.+ .+.++|.||||+++|||++|.|||...+..+....... ....+
T Consensus 575 ----KTwTFcGTpEYVAPEIILnKG----------HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~ 640 (732)
T KOG0614|consen 575 ----KTWTFCGTPEYVAPEIILNKG----------HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEF 640 (732)
T ss_pred ----ceeeecCCcccccchhhhccC----------cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhc
Confidence 234678999999999987554 45689999999999999999999987654433222222 11235
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHhhhcccCCCCCCchhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFS-----AESYLQNYAAVVFPTYFSPFLH 307 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~~~~~~fP~~f~~fl~ 307 (1553)
|........+||+++...+|.+|.. +.++-+| .||..|-.
T Consensus 641 Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-------~Wf~gfdw 685 (732)
T KOG0614|consen 641 PRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-------RWFEGFDW 685 (732)
T ss_pred ccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-------hhhhcCCh
Confidence 5555678999999999999999985 7888888 45655533
|
|
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.8e-30 Score=305.60 Aligned_cols=246 Identities=18% Similarity=0.188 Sum_probs=197.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|...+.||+|+||.||++++.. ..+|+|++.+... ...+....+..|+++++.++|||++++++++.++...|+|
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK--QSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--CchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 47889999999999999999853 5699999865422 2234445677888999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.|+|.+.+.. ...+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 104 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------ 177 (317)
T cd06635 104 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP------ 177 (317)
T ss_pred EeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC------
Confidence 99999999888754 45589999999999999999999999999999999999999999999999998764311
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-H---HHHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-L---AYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~---~~~~~~~~~~~ 258 (1553)
.....+++.|+|||.+... ....++.++|+||+||++|||++|.+||..... . ........ .
T Consensus 178 -----~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--~ 243 (317)
T cd06635 178 -----ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--T 243 (317)
T ss_pred -----cccccCCccccChhhhhcC-------CCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC--C
Confidence 1123467789999987421 134578899999999999999999888754322 1 22222211 1
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
......++.++++|.+||+.+|.+||++.++++|.
T Consensus 244 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 244 LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 12234457899999999999999999999999984
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-30 Score=298.88 Aligned_cols=249 Identities=20% Similarity=0.192 Sum_probs=184.9
Q ss_pred EeeccCcEEEEEEEECC-c---eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 32 VLGGSRFFKSILCKHDE-G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~-~---~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
.||+|+||+||+++..+ . .+++|.+... ......+.+.+|..+++.++||||+++++.+.+....|+||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN----ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYC 77 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC----CChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecC
Confidence 69999999999997543 2 3556665432 11234556778888999999999999999999999999999999
Q ss_pred c-CCHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 108 F-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 108 ~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+ |+|.+++... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||++......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----- 152 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE----- 152 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc-----
Confidence 9 6999999753 23667788899999999999999999999999999999999999999999987532111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHH-HH---Hhc-CCC-
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLL-AY---RRG-QYD- 255 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~-~~---~~~-~~~- 255 (1553)
..........++..|+|||.+....+. .....++.++|||||||++|||+++ .+||...... .+ ... ...
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 229 (268)
T cd05086 153 DYIETEDDKCVPLRWLAPELVGEFHGG---LITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKL 229 (268)
T ss_pred hhhhcccCCcCcccccCchhcccccCc---cccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccccc
Confidence 001111233467789999987532211 1223568899999999999999975 7888543221 11 111 111
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
..+.+....++.+.+++..|| .+|++||+++++++.+
T Consensus 230 ~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 230 FKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 223334445678999999999 6899999999998864
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.1e-30 Score=295.98 Aligned_cols=252 Identities=20% Similarity=0.211 Sum_probs=199.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|.+.+.||+|+||.||+|.+.. ..|++|++...............+.+|+++++.++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 68999999999999999998753 6799998865422222334456788899999999999999999988664 5688
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+++||++ ++|.+++...+.+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||.++........
T Consensus 83 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 162 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS 162 (264)
T ss_pred EEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc
Confidence 9999998 599999987777899999999999999999999999999999999999999999999999998754221111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcC-CCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQ-YDPSQ 258 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~-~~~~~ 258 (1553)
... .....++..|+|||.+. +..++.++|+|||||++|+|++|++||.... .....+.. ....+
T Consensus 163 ~~~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 228 (264)
T cd06653 163 GTG----IKSVTGTPYWMSPEVIS----------GEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKP 228 (264)
T ss_pred Ccc----ccccCCcccccCHhhhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCC
Confidence 111 11234678899999764 2356789999999999999999999996443 22222222 12233
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...++.+.++|.+||. +|.+||++.++++|
T Consensus 229 ~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 229 MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 4555667789999999999 57999999999987
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=268.86 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=215.6
Q ss_pred cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEe
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s 1206 (1553)
..|..+..|.||..-|+.++.++||.|++|||.||++++||+.+++ +.+.+.+|...|++++|+++.+.+++||
T Consensus 51 ~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~------~t~~f~GH~~dVlsva~s~dn~qivSGS 124 (315)
T KOG0279|consen 51 KYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGE------STRRFVGHTKDVLSVAFSTDNRQIVSGS 124 (315)
T ss_pred ccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCc------EEEEEEecCCceEEEEecCCCceeecCC
Confidence 3488999999999999999999999999999999999999999886 6778999999999999999999999999
Q ss_pred CCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceecc
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286 (1553)
Q Consensus 1207 ~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~ 1286 (1553)
.|.+|++|++-... + .......+...|.|++|+|+. +..+|+.++.|++|++||+++-+....+.+
T Consensus 125 rDkTiklwnt~g~c-------k------~t~~~~~~~~WVscvrfsP~~-~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g 190 (315)
T KOG0279|consen 125 RDKTIKLWNTLGVC-------K------YTIHEDSHREWVSCVRFSPNE-SNPIIVSASWDKTVKVWNLRNCQLRTTFIG 190 (315)
T ss_pred CcceeeeeeecccE-------E------EEEecCCCcCcEEEEEEcCCC-CCcEEEEccCCceEEEEccCCcchhhcccc
Confidence 99999999986210 1 111122236799999999984 356999999999999999999888888865
Q ss_pred CCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1287 ~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~ 1366 (1553)
|.+.++.++++|||...++|+.||.+.+||++.++.+.++. +...|+.++| .|. .++++.+. +..
T Consensus 191 --h~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~--a~~~v~sl~f-spn---------rywL~~at-~~s 255 (315)
T KOG0279|consen 191 --HSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE--AFDIVNSLCF-SPN---------RYWLCAAT-ATS 255 (315)
T ss_pred --ccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc--CCCeEeeEEe-cCC---------ceeEeecc-CCc
Confidence 99999999999999999999999999999999999977665 4567888888 553 44555554 445
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-e
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D 1445 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ 1445 (1553)
|+|||++++.|+..+....... ..........+++|+++| .
T Consensus 256 IkIwdl~~~~~v~~l~~d~~g~--------------------------------------s~~~~~~~clslaws~dG~t 297 (315)
T KOG0279|consen 256 IKIWDLESKAVVEELKLDGIGP--------------------------------------SSKAGDPICLSLAWSADGQT 297 (315)
T ss_pred eEEEeccchhhhhhcccccccc--------------------------------------ccccCCcEEEEEEEcCCCcE
Confidence 9999999999887776322100 001112245778999999 7
Q ss_pred EEEccCCCeEEEEeCC
Q 000410 1446 LLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1446 llTgg~Dg~IrlWDl~ 1461 (1553)
|++|-.|+.||+|.+.
T Consensus 298 Lf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 298 LFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEeeecCCcEEEEEee
Confidence 8899999999999875
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=310.02 Aligned_cols=251 Identities=19% Similarity=0.162 Sum_probs=186.6
Q ss_pred EEeecc--CcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 31 EVLGGS--RFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 31 ~~LG~G--~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
..||+| +|++||++++. ++.||+|++..... .....+.+.+|..+++.++||||+++++++..+...|+|+||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~ 80 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC---TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPF 80 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEec
Confidence 456666 99999999984 47799999865421 123446788888899999999999999999999999999999
Q ss_pred cc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 107 FF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 107 ~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
+. ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++++||+.+............
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 81 MAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred ccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99 5999988753 34899999999999999999999999999999999999999999999999854322111111000
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-H---HhcCC-CC--
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-Y---RRGQY-DP-- 256 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~---~~~~~-~~-- 256 (1553)
.........++..|+|||.+.+. ...++.++||||+||++|||++|.+||....... + ..... .+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQD--------LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLD 232 (328)
T ss_pred cccccccccCccCccChhhhcCC--------CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcc
Confidence 00001112345669999987521 2347889999999999999999999996432111 1 11000 00
Q ss_pred ----------------------------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 ----------------------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ----------------------------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........++.+.+||.+||+.||++|||++|+|+|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000011234578999999999999999999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=300.55 Aligned_cols=250 Identities=20% Similarity=0.227 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--D 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~ 97 (1553)
+|++.+.||+|+||.||++.+. +..+|+|++..... ....+.+.+|+++++.+.||||+++++++.. .
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE----EQHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc----hHHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 6788899999999999999864 25699999865422 1445678888899999999999999999877 5
Q ss_pred CEEEEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
...|++|||++ ++|.+++...+ .+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||.+....
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 67999999998 69999997654 58999999999999999999999999999999999999999999999999887653
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH--------
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL-------- 247 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~-------- 247 (1553)
.... .........++..|+|||.+. ...++.++|||||||++|||++|..||......
T Consensus 161 ~~~~----~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 226 (284)
T cd05038 161 EDKD----YYYVKEPGESPIFWYAPECLR----------TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA 226 (284)
T ss_pred cCCc----ceeccCCCCCcccccCcHHHc----------cCCCCcccchHHHhhhhheeeccCCCcccccchhccccccc
Confidence 1111 111111223455699999764 336788999999999999999997776532111
Q ss_pred ----------HHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 248 ----------AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 248 ----------~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
....... ....+...+..+.+++.+||+.||++||++.|+++.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 227 QGQMIVTRLLELLKEGE--RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred cccccHHHHHHHHHcCC--cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 1111111 111122335689999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=298.64 Aligned_cols=236 Identities=20% Similarity=0.195 Sum_probs=183.1
Q ss_pred EEeeccCcEEEEEEEECCc------------eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 31 EVLGGSRFFKSILCKHDEG------------LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~~------------~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+.||+|+||.||+|.+.+. .+++|++.... .. ...+.+|..+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RD-SLAFFETASLMSQLSHKHLVKLYGVCVR-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hh-HHHHHHHHHHHHcCCCcchhheeeEEec-C
Confidence 4689999999999998642 26777664321 11 5667788889999999999999999887 7
Q ss_pred EEEEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-------cEEEeecC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-------WLYLSDFA 169 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-------~vkL~DFG 169 (1553)
..|+||||++ |+|.+++...+ .++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 7899999999 69999998765 689999999999999999999999999999999999999887 79999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHHH
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLA 248 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~~ 248 (1553)
++..... .....++..|+|||.+... ...++.++|||||||++|||++| .+||.......
T Consensus 154 ~a~~~~~-----------~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~ 214 (259)
T cd05037 154 IPITVLS-----------REERVERIPWIAPECIRNG--------QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE 214 (259)
T ss_pred ccccccc-----------ccccccCCCccChhhhcCC--------CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh
Confidence 9875422 0122345679999977521 13678899999999999999995 77775432211
Q ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 249 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.... +......+......+.++|.+||..+|.+||++.++++.+
T Consensus 215 ~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 215 KERF-YQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHHH-HhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1110 0011111222236899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-30 Score=311.30 Aligned_cols=248 Identities=19% Similarity=0.262 Sum_probs=189.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|.+.+.||.|+||.||+|.+.. +.||+|++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 79999999999999999998854 6799999865422 2334566788999999999999998776543
Q ss_pred --------CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeec
Q 000410 98 --------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDF 168 (1553)
Q Consensus 98 --------~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DF 168 (1553)
...|+||||++++|.+++... .+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|+||
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMETDLANVLEQG-PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccccccceEEEEeecccccHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 357999999999999988754 4899999999999999999999999999999999999985 457899999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA 248 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~ 248 (1553)
|.++........ ........++..|+|||.+.. ...++.++|||||||++|+|++|.+||.......
T Consensus 160 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~ 226 (342)
T cd07854 160 GLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLS---------PNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE 226 (342)
T ss_pred ccceecCCcccc----ccccccccccccccCHHHHhC---------ccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 998754221111 111122346778999997642 2357789999999999999999999996432111
Q ss_pred ----HHhc-----------------------CCCCC---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 ----YRRG-----------------------QYDPS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ----~~~~-----------------------~~~~~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... ..... .......+.++++||.+||+.||++|||++++++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 227 QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 00000 00112345678999999999999999999999998
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-30 Score=308.54 Aligned_cols=256 Identities=20% Similarity=0.162 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
.+++++.+|.|+++.++++...+..||+|++.... ........+.+|+++++.++||||+++++++..+...|++||
T Consensus 3 ~~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e 79 (314)
T cd08216 3 LTLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDS---CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSP 79 (314)
T ss_pred hhhhhHhhcCCceEEEEEecCCCCEEEEEEEeccc---cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEe
Confidence 35667777888888888888777889999997542 112345568888999999999999999999999999999999
Q ss_pred ccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 106 YFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|++ |+|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+...........
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 80 LMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred ccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999 6999998753 3588999999999999999999999999999999999999999999999998875533222111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH-HH---HhcCCCC--
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL-AY---RRGQYDP-- 256 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~-~~---~~~~~~~-- 256 (1553)
..........++..|+|||.+... ...++.++|+||+||++|||++|.+||...... .+ ..+....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQN--------LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLL 231 (314)
T ss_pred ccccccccccccccccCHHHhcCC--------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCcccc
Confidence 222222344567789999987521 234788999999999999999999998643211 11 1111000
Q ss_pred ----------------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 ----------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ----------------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........+..+.+|+.+||+.||++|||++++|+|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 232 DKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred ccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000001113568899999999999999999999998
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=303.56 Aligned_cols=247 Identities=19% Similarity=0.216 Sum_probs=195.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
-|...+.||+|+||.||+|++. +..|++|++..... ........+.+|.++++.++|||++++++++.+....|+|
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 99 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK--QTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLV 99 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc--CchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 3666788999999999999875 35699999865422 1223345677788999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.|+|.+.+.. ...+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 100 ~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~------ 173 (313)
T cd06633 100 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP------ 173 (313)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC------
Confidence 99999999888865 34589999999999999999999999999999999999999999999999998753210
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHh-cCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRR-GQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~-~~~~~~~~~ 260 (1553)
.....++..|+|||.+... ....++.++|||||||++|+|++|.+||...+ ...... .........
T Consensus 174 -----~~~~~~~~~y~aPE~~~~~-------~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
T cd06633 174 -----ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQ 241 (313)
T ss_pred -----CCCccccccccChhhcccc-------CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Confidence 1123467889999987421 13457889999999999999999988875433 222211 111112222
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+..+++|+.+||+.+|.+||++.++++|
T Consensus 242 ~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33345679999999999999999999999987
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=311.89 Aligned_cols=251 Identities=20% Similarity=0.261 Sum_probs=198.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||.|+||.||+|++.+ +.|++|++.+.. ......+.+.+|..+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF---DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFN 77 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc---ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccccc
Confidence 48899999999999999999864 679999986542 11334456778889999999999999999987765
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|++|||++++|.+++..+..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||.+.......
T Consensus 78 ~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 78 DVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred ceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 78999999999999999887789999999999999999999999999999999999999999999999999988654332
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH----hcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR----RGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~----~~~~ 254 (1553)
.... ......++..|+|||.+.+ ...++.++|+||+||++|+|++|.+||......... ....
T Consensus 158 ~~~~----~~~~~~~~~~y~aPE~~~~---------~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 224 (330)
T cd07834 158 DEKG----FLTEYVVTRWYRAPELLLS---------SSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLG 224 (330)
T ss_pred cccc----cccccccccCcCCceeeec---------ccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcC
Confidence 1111 1122346788999997742 126788999999999999999999999654322111 0000
Q ss_pred CC------------------------C---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DP------------------------S---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~------------------------~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+ . .......+..+.++|.+||+.||++||+++++++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred CCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00 0 00111235679999999999999999999999988
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-30 Score=304.02 Aligned_cols=248 Identities=16% Similarity=0.107 Sum_probs=192.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--Cc----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EG----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
+|+..+.||+|+||.||+|.+. +. .+|+|++... ........+.+|..+++.++||||+++++++... .
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET----TGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 7889999999999999999874 22 3677777533 1233344577888899999999999999988754 4
Q ss_pred EEEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
.++++||++ |+|.+++..+. .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 678999999 79999987654 5899999999999999999999999999999999999999999999999998754221
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH---HHHHHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH---LLAYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~---~~~~~~~~ 253 (1553)
.. ........++..|+|||.+. +..++.++|||||||++|||++ |..||.... ...+....
T Consensus 163 ~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 227 (303)
T cd05110 163 EK-----EYNADGGKMPIKWMALECIH----------YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG 227 (303)
T ss_pred cc-----ccccCCCccccccCCHHHhc----------cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC
Confidence 11 11112233456799999763 3467889999999999999997 788886432 22333222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
... ..+...+..+.+++.+||..||++||+++++++.++.
T Consensus 228 ~~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~ 267 (303)
T cd05110 228 ERL--PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR 267 (303)
T ss_pred CCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 211 1233456789999999999999999999999988653
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-30 Score=298.60 Aligned_cols=248 Identities=19% Similarity=0.242 Sum_probs=194.0
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||.|+||.||++++. +..+++|++.+.. .......+.+.+|.++++.++||||+++++.++.++..|+++||+. +
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKAD--MIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchh--hhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCC
Confidence 689999999999996 4679999986542 1223456678888899999999999999999999999999999998 5
Q ss_pred CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC-CCCcceee
Q 000410 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-PSDFSFFF 188 (1553)
Q Consensus 110 sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~~~ 188 (1553)
+|.+++...+.+++.++..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++......... ........
T Consensus 79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 158 (265)
T cd05579 79 DLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKED 158 (265)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccc
Confidence 99999987678999999999999999999999999999999999999999999999999988754332110 00000111
Q ss_pred ecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCC--CCH
Q 000410 189 DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKI--PDS 266 (1553)
Q Consensus 189 ~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~ 266 (1553)
....++..|+|||.+. ....+.++|+|||||++|+|++|.+||..................++.. .+.
T Consensus 159 ~~~~~~~~~~~Pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (265)
T cd05579 159 KRIVGTPDYIAPEVIL----------GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSD 228 (265)
T ss_pred cCcccCccccCHHHhc----------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCH
Confidence 2233567799999764 2346789999999999999999999997554433222111111112222 267
Q ss_pred HHHHHHHHhcccCcCCCCCH---HHHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSA---ESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa---~elL~~ 292 (1553)
.+.++|.+||+.+|.+||++ .++|+|
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 229 EAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred HHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 89999999999999999999 888887
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-30 Score=295.42 Aligned_cols=247 Identities=20% Similarity=0.217 Sum_probs=196.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||++.... +.+|+|.+...... ....+.+.+|+.+++.++||||+++++.+..+...|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv 77 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP---VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIV 77 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc---chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEE
Confidence 48899999999999999999864 66999998654211 12234567888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCccccccCCCC
Q 000410 104 RQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~~ 179 (1553)
+||+. ++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++++++ .++|+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99998 59999986543 478999999999999999999999999999999999999886 46999999886542111
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC-CCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD-PSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~-~~~ 258 (1553)
. ......|++.|+|||.+. ...++.++|+||+||++|||++|.+||...+.......... ...
T Consensus 157 ---~---~~~~~~~~~~~~ape~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 220 (257)
T cd08225 157 ---E---LAYTCVGTPYYLSPEICQ----------NRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA 220 (257)
T ss_pred ---c---cccccCCCccccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC
Confidence 1 112335678899999764 34578899999999999999999999975543332221111 112
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+..++++|.+||..+|++|||+.++++|
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 2333445789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=306.74 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=191.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||.|+||.||+|.+. ++.+++|++....... .....+.+|.++++.++||||+++++++...
T Consensus 9 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD---GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC---CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 8999999999999999999985 3679999987542211 1122345677899999999999999877433
Q ss_pred --CEEEEEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 98 --KAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 98 --~~~~lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
...|+||||+.++|.+.+.. ...+++.+++.++.||++||.|||++||+||||||+||++++++.++|+|||++...
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 35799999999999888765 346999999999999999999999999999999999999999999999999988755
Q ss_pred cCCCCCCCC----cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-
Q 000410 175 YIPYDDPSD----FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY- 249 (1553)
Q Consensus 175 ~~~~~~~~~----~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~- 249 (1553)
......... ....+....+++.|+|||.+.+ ...++.++||||+||++|||++|.+||........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG---------ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhC---------CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 332211110 1111223345788999997642 23578899999999999999999999964332211
Q ss_pred ---Hh--cCCCC---------------------CCCC---CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 ---RR--GQYDP---------------------SQHL---EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ---~~--~~~~~---------------------~~~~---~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. +...+ ...+ .....+.+.++|.+||+.||.+|||+.|++.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00 00000 0000 01123578899999999999999999999988
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.8e-30 Score=309.71 Aligned_cols=258 Identities=17% Similarity=0.180 Sum_probs=195.4
Q ss_pred ceE-EEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCH---------HHHHHHHHHHHHHHhcCCCCCeeEEEEE
Q 000410 26 NLV-LKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDL---------REYERRLFHIRETFRSIDHPHVWAFQFW 93 (1553)
Q Consensus 26 ~y~-~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~---------~~~~~~l~~e~~~l~~l~hpnIv~~~~~ 93 (1553)
+|. +.+.||.|+||.||+|.+. +..||+|++......... ......+.+|.++++.++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 454 5678999999999999875 367999998654221110 0012246678889999999999999999
Q ss_pred EEeCCEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccc
Q 000410 94 QETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173 (1553)
Q Consensus 94 ~~~~~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~ 173 (1553)
+..+...|+||||+.|+|.+++..+..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+..
T Consensus 89 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~ 168 (335)
T PTZ00024 89 YVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARR 168 (335)
T ss_pred EecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceee
Confidence 99999999999999999999998888899999999999999999999999999999999999999999999999998875
Q ss_pred ccCCCCCCC-------CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH
Q 000410 174 TYIPYDDPS-------DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL 246 (1553)
Q Consensus 174 ~~~~~~~~~-------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~ 246 (1553)
...+..... ..........+++.|+|||.+.+ ...++.++|||||||++|||++|.+||...+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 169 YGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG---------AEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred cccccccccccccccccccccccccccccCCCCChhccc---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 531110000 00111122345778999997642 23467899999999999999999999964432
Q ss_pred HH----HHh--c-C----CC---------C-----CC---CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 247 LA----YRR--G-Q----YD---------P-----SQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 247 ~~----~~~--~-~----~~---------~-----~~---~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. +.. + . +. + .. ......+..+.++|.+||+.||++||+++|++.|
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 11 110 0 0 00 0 00 0111235678999999999999999999999998
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=294.99 Aligned_cols=239 Identities=21% Similarity=0.224 Sum_probs=186.5
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHH-HHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRE-TFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~-~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||.|+||.||+|.+. ++.||+|++.+... ........+..|.. +....+||||++++++++.++..|+|+||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDM--IAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhh--hHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEecc
Confidence 57999999999999885 36799999865421 11122222333333 344568999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ ++|.+++...+.+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||+++....
T Consensus 80 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 80 NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 8 59999998877799999999999999999999999999999999999999999999999998864321
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEK 262 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~~~~~~~ 262 (1553)
.....++..|+|||.+. +..++.++||||+|+++|+|++|.+||...+.... ..+..........
T Consensus 150 -~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (260)
T cd05611 150 -NKKFVGTPDYLAPETIL----------GVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKE 218 (260)
T ss_pred -cccCCCCcCccChhhhc----------CCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccc
Confidence 11223567799999764 23478899999999999999999999975543332 2222222222333
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCH---HHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSA---ESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 292 (1553)
..++.+.++|.+||+.||++||++ +|+++|
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 456789999999999999999955 688777
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=297.00 Aligned_cols=244 Identities=18% Similarity=0.174 Sum_probs=192.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~ 101 (1553)
+|...+.||.|++|.||+|.+.+ +.+|+|++..... ......+.+|+++++.++||||+++++++.. ....|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN----PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc----hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEE
Confidence 68899999999999999999854 6699999865421 2445667888899999999999999998754 34789
Q ss_pred EEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 102 LLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
+||||++ ++|.+++. ....+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++.....
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 9999998 58988764 234589999999999999999999999999999999999999999999999998865432
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch--------HHHH
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS--------HLLA 248 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~--------~~~~ 248 (1553)
... ....++..|+|||.+. +..++.++|||||||++|+|++|..||... ....
T Consensus 158 ~~~---------~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (287)
T cd06621 158 SLA---------GTFTGTSFYMAPERIQ----------GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLS 218 (287)
T ss_pred ccc---------ccccCCccccCHHHhc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHH
Confidence 111 1223567799999764 345788999999999999999999998654 1122
Q ss_pred HHhcCCCCC--CCCC--CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQYDPS--QHLE--KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~~~--~~~~--~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+......+. .... ...++.++++|.+||+.||.+|||+.|+++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 219 YIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 222111110 0111 1234679999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-30 Score=301.39 Aligned_cols=248 Identities=15% Similarity=0.080 Sum_probs=191.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
+|+..+.||+|+||.||++.+.. ..+|+|.+.+... ......+.+|..++.++. ||||+++++++..+...++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD----EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC----hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 56778899999999999999864 6799999865421 134456777888888885 9999999999999999999
Q ss_pred EeccccCCHHHHh---c--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 103 LRQYFFNSLRDRL---S--TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 103 V~E~~~gsL~d~l---~--~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
+|||+.++|.++. . ....+++..+..++.|++.||+|||+ .||+||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 81 CMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred EEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9999997665543 2 23568999999999999999999997 4999999999999999999999999999875432
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhcCC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRGQY 254 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~~~ 254 (1553)
+... ....+++.|+|||.+.... ...++.++||||+||++|+|++|++||.... .....+...
T Consensus 161 ~~~~--------~~~~~~~~y~aPE~~~~~~-------~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 225 (288)
T cd06616 161 SIAK--------TRDAGCRPYMAPERIDPSA-------RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK 225 (288)
T ss_pred CCcc--------ccccCccCccCHHHhcccc-------ccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC
Confidence 2111 1224677899999875221 2367889999999999999999999996432 122222111
Q ss_pred CCCCCC----CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQHL----EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~----~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+.+ ....+..+.+||.+||+.||++||+++++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 226 GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 12246789999999999999999999999998
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=310.23 Aligned_cols=252 Identities=21% Similarity=0.329 Sum_probs=193.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC--CEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD--KAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~--~~~ 100 (1553)
+|++.+.||+|+||.||+|.+. +..+|+|.+.+... . ......+.+|..+++.+ +||||+++++++... ...
T Consensus 8 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~-~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR--N-ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred HHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC--c-chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 6888999999999999999885 35699998865311 1 12234466788899999 999999999988543 468
Q ss_pred EEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 101 YLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 101 ~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|+||||++++|.+++..+ .+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.........
T Consensus 85 ~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 85 YLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred EEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 999999999999999876 6889999999999999999999999999999999999999999999999988755322211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh-----
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR----- 251 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~----- 251 (1553)
.. ........++..|+|||.+.+ ...++.++||||+||++|+|++|++||....... +..
T Consensus 164 ~~--~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 232 (337)
T cd07852 164 PE--NPVLTDYVATRWYRAPEILLG---------STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP 232 (337)
T ss_pred cc--CcchhcccccccccCceeeec---------cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 00 011122346788999997642 2356789999999999999999999996432111 000
Q ss_pred ----------------------cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ----------------------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ----------------------~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.............+..+.++|.+||+.||++|||+.++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00001111112245789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=305.52 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEe----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQET---- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~---- 96 (1553)
+|++.+.||+|+||.||++++.. ..||+|++.... ......+.+.+|.++++.+ +||||+++++....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 77 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF---SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN 77 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc---ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc
Confidence 48899999999999999999864 369999985431 1122344566777888888 59999999986532
Q ss_pred CCEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 97 DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 97 ~~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
....|++++|++++|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||.++....
T Consensus 78 ~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 78 FNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred CCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 24689999999999999998877899999999999999999999999999999999999999999999999999875532
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH----h-
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR----R- 251 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~----~- 251 (1553)
..... ........|++.|+|||.+.+ ...++.++||||+||++|+|++|.+||...+..... .
T Consensus 158 ~~~~~---~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~ 225 (332)
T cd07857 158 NPGEN---AGFMTEYVATRWYRAPEIMLS---------FQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQV 225 (332)
T ss_pred ccccc---cccccCcccCccccCcHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHH
Confidence 21111 111123457888999997642 235788999999999999999999999653321100 0
Q ss_pred ------------------------cCCC--CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ------------------------GQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ------------------------~~~~--~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... .........+..+++++.+||+.||++|||+.++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 226 LGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 0011112235789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=299.70 Aligned_cols=249 Identities=15% Similarity=0.139 Sum_probs=190.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|++.+.||+|+||.||+|.+. +..||||++.+... ......+.++..++... .||||+++++++.++...|+
T Consensus 16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN----KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC----hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 7899999999999999999997 56799999975421 11223333444444444 59999999999999999999
Q ss_pred EeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 103 LRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|||++++|.+.+.. ...+++..+..++.||+.||.|||+ .||+||||+|+||++++++.++|+|||.+........
T Consensus 92 v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~- 170 (296)
T cd06618 92 CMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA- 170 (296)
T ss_pred EeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-
Confidence 999999888777754 3468999999999999999999997 6999999999999999999999999998865421111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhcCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRGQYDPSQ 258 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~~~~~~~ 258 (1553)
.....++..|+|||.+.... ....++.++|||||||++|+|++|++||.... ...+.........
T Consensus 171 -------~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 237 (296)
T cd06618 171 -------KTRSAGCAAYMAPERIDPPD------PNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP 237 (296)
T ss_pred -------ccCCCCCccccCHhhcCCCC------CccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC
Confidence 11223567899999875321 12457889999999999999999999996522 1122111111111
Q ss_pred CC--CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HL--EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~--~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+ ....++++++||.+||..||++||+++++++|
T Consensus 238 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 238 SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 12346789999999999999999999999988
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-30 Score=293.78 Aligned_cols=245 Identities=19% Similarity=0.250 Sum_probs=199.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+.. ..+++|.+.+... .......+.+|.++++.++||||+++++++.+....|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM---SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIV 77 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc---cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEE
Confidence 48899999999999999998753 5699999865421 123345566788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++ ++|.+++.. +..+++..+..++.|++.||.|||++|++||||+|+||+++.++.+||+|||+++.....
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99998 599998865 355899999999999999999999999999999999999999999999999998765321
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPS 257 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~ 257 (1553)
......+++.|+|||.+. +..++.++|+||+|+++|+|++|++||.......+..... ...
T Consensus 157 --------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 218 (256)
T cd08530 157 --------MAKTQIGTPHYMAPEVWK----------GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY 218 (256)
T ss_pred --------CcccccCCccccCHHHHC----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC
Confidence 112334678899999764 3456789999999999999999999998665543322211 111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+..+...+.+++++|.+||..+|++||++.++++|
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 22334556789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.6e-30 Score=302.10 Aligned_cols=244 Identities=20% Similarity=0.205 Sum_probs=191.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|.....||.|+||.||++.+. +..||+|++..... ...+.+.+|+.+++.++||||+++++++..++..|++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-----chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEE
Confidence 3445568999999999999885 46799999865321 2234567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++.. ..+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 97 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--- 172 (297)
T cd06659 97 MEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--- 172 (297)
T ss_pred EecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc---
Confidence 99999 588887755 4589999999999999999999999999999999999999999999999998864321110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh--cCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR--GQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~--~~~~~~~~ 259 (1553)
......++..|+|||.+. +..++.++||||+||++|||++|.+||..... ..+.. ........
T Consensus 173 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 238 (297)
T cd06659 173 ----KRKSLVGTPYWMAPEVIS----------RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLK 238 (297)
T ss_pred ----cccceecCccccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCcc
Confidence 012234678899999774 33568899999999999999999888854332 22221 11111111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+..+.++|.+||+.+|++||+++++++|
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 222345689999999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=306.12 Aligned_cols=244 Identities=20% Similarity=0.227 Sum_probs=192.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||.||++.+. +..||+|++.+.. ........+.+|+.+++.++||||+++++++..+.
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF---QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc---cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 7999999999999999999875 3669999986532 22344556778999999999999999999987654
Q ss_pred -EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 99 -AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 99 -~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
..|+||||++++|.+++... .+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMKHE-KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred ceEEEEEecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 46899999988999888754 5899999999999999999999999999999999999999999999999988754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~~ 253 (1553)
.....+++.|+|||.+.+ ...++.++|+||+||++|+|++|.+||...... .+....
T Consensus 172 ----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~ 232 (343)
T cd07880 172 ----------MTGYVVTRWYRAPEVILN---------WMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVT 232 (343)
T ss_pred ----------ccccccCCcccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 112245778999997742 124688999999999999999999999643221 111100
Q ss_pred CC-----------------------C----CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 YD-----------------------P----SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~-----------------------~----~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. . ...+....++.+.++|.+||+.||++|||+.++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred CCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0 001112345678999999999999999999999987
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.7e-30 Score=307.37 Aligned_cols=243 Identities=19% Similarity=0.256 Sum_probs=189.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|.+.+.||.|+||.||+|.+. +..||+|++.+... .+.....+.+|+.+++.+.||||+++++++...
T Consensus 16 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ---SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc---cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 7899999999999999999875 46799999865421 122344567788999999999999999988654
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+|+||+.++|.+++. ..+++.++..++.|++.||+|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 93 ~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 93 QDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred ceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence 3469999999988888764 34899999999999999999999999999999999999999999999999998753111
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~ 253 (1553)
. ....++..|+|||.+.+ ...++.++|||||||++|||++|+.||....... +....
T Consensus 171 ------~----~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 231 (342)
T cd07879 171 ------M----TGYVVTRWYRAPEVILN---------WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 231 (342)
T ss_pred ------C----CCceeeecccChhhhcC---------ccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 0 12235678999997642 2357889999999999999999999997543211 11000
Q ss_pred ----------------------CC--CCCC---CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ----------------------YD--PSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ----------------------~~--~~~~---~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. +... .....++.+.+||.+||+.||++||++++++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 232 GVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred CCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0000 011235678999999999999999999999988
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=297.35 Aligned_cols=245 Identities=21% Similarity=0.196 Sum_probs=186.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHh---cCCCCCeeEEEEEEEeCCE--
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFR---SIDHPHVWAFQFWQETDKA-- 99 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~---~l~hpnIv~~~~~~~~~~~-- 99 (1553)
|++.+.||+|+||.||+|++.. ..||+|++...... ......+..|..+++ .++||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE---EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc---chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC
Confidence 5788999999999999999864 67999999754221 112223444545554 4469999999999987766
Q ss_pred ---EEEEeccccCCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 100 ---AYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 100 ---~~lV~E~~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
.|++|||+.++|.+++...+ .+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+...
T Consensus 78 ~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 78 ELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred CceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence 99999999999999886543 4899999999999999999999999999999999999999999999999988765
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HH
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YR 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~ 250 (1553)
..... .....++..|+|||.+. +..++.++|+||+||++|||++|.+||....... +.
T Consensus 158 ~~~~~--------~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07838 158 SFEMA--------LTSVVVTLWYRAPEVLL----------QSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIF 219 (287)
T ss_pred cCCcc--------cccccccccccChHHhc----------cCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHH
Confidence 22111 11223577899999764 3356789999999999999999999997543221 11
Q ss_pred hcC------------------CCCC--CCC---CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQ------------------YDPS--QHL---EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~------------------~~~~--~~~---~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... +... ... ....++.+.++|.+||+.||.+||+++++++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 220 DVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred HHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 100 0000 000 00123578899999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=293.44 Aligned_cols=236 Identities=24% Similarity=0.275 Sum_probs=183.5
Q ss_pred ceEEEEE--eeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 26 NLVLKEV--LGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~--LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
+|.+.+. ||+|+||.||++.+.. ..+|+|++.+.... ..+... ..++ .+||||+++++.+..++..|
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~---~~~~--~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMV---HQLM--KDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHH---HHHh--hcCCCEEEEEEEEecCCeeE
Confidence 3444444 5999999999999854 56999998654111 110000 0111 26999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCccccccCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~~ 179 (1553)
+||||++ ++|.+++..+..+++.++..++.||+.||.|||+.|++||||||+||+++.++ .++|+|||.+......
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-- 163 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-- 163 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC--
Confidence 9999998 69999998877899999999999999999999999999999999999999988 9999999988654211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----HHHHHhcCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQY 254 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~~~~ 254 (1553)
....++..|+|||.+. +..++.++|+||+||++|+|++|..||.... ...+....
T Consensus 164 ---------~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~- 223 (267)
T PHA03390 164 ---------SCYDGTLDYFSPEKIK----------GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ- 223 (267)
T ss_pred ---------ccCCCCCcccChhhhc----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-
Confidence 1224678899999764 3456789999999999999999999996432 12222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCC-HHHHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFS-AESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rps-a~elL~~ 292 (1553)
..........++.++++|.+||+.||.+||+ ++|+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 224 QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 2222233456789999999999999999996 5999988
|
|
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-29 Score=298.16 Aligned_cols=243 Identities=17% Similarity=0.173 Sum_probs=197.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|+..+.||+|+||.||++.+. ++.+++|++..... ....+.+|.+.++.++||||+++++.+..+...|++
T Consensus 20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ------NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch------hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 5788899999999999999997 57799999965421 345567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
+||++ ++|.+++...+ .+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+.........
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 172 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK- 172 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh-
Confidence 99999 69999998876 7999999999999999999999999999999999999999999999999987644221110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~ 257 (1553)
.....++..|+|||.+. +..++.++|+|||||++|+|++|.+||....... .........
T Consensus 173 ------~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd06614 173 ------RNSVVGTPYWMAPEVIK----------RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPL 236 (286)
T ss_pred ------hccccCCcccCCHhHhc----------CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence 11223567899999764 3357889999999999999999999987543221 111111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+..++++|.+||+.+|.+||++.+++++
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 237 -KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1122245789999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=298.72 Aligned_cols=244 Identities=17% Similarity=0.146 Sum_probs=194.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++... ++.|++|.+.... ....+.+.+|..+++.++||||+++++++......|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 20 KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-----QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-----chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 7899999999999999999864 4679999985431 12234567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++.+. .+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 95 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--- 170 (293)
T cd06647 95 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--- 170 (293)
T ss_pred EecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc---
Confidence 99998 5999998765 478999999999999999999999999999999999999999999999998764421111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC-CC--CCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ-YD--PSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~-~~--~~~~ 259 (1553)
......+++.|+|||.+. ...++.++|+||+||++|+|++|.+||...+........ .. +...
T Consensus 171 ----~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd06647 171 ----KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ 236 (293)
T ss_pred ----ccccccCChhhcCchhhc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCC
Confidence 112234678899999764 235688999999999999999999999755432211111 01 1111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...+..++++|.+||..+|++||++++++.|
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 222335689999999999999999999999988
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=308.77 Aligned_cols=244 Identities=20% Similarity=0.220 Sum_probs=192.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA---- 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~---- 99 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.... ........+.+|..+++.+.||||+++++++..+..
T Consensus 16 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 16 RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF---QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc---chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 78999999999999999999864 569999886431 112334556678899999999999999887765544
Q ss_pred --EEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 --AYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 --~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
.|+|+||++++|.+++... .+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+......
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~~-~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKCQ-KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE 171 (343)
T ss_pred ccEEEEEecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence 8999999999999999764 5899999999999999999999999999999999999999999999999998754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~ 253 (1553)
.....++..|+|||.+.+ ...++.++|||||||++|+|++|++||....... +....
T Consensus 172 ----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~ 232 (343)
T cd07851 172 ----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLV 232 (343)
T ss_pred ----------ccCCcccccccCHHHHhC---------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Confidence 122345778999997642 2256889999999999999999999996433221 11100
Q ss_pred CC------------------------CCC---CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 YD------------------------PSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~------------------------~~~---~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. ... ......++.+.++|.+||+.||++|||+.++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00 000 0111236789999999999999999999999998
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=295.24 Aligned_cols=251 Identities=14% Similarity=0.068 Sum_probs=189.4
Q ss_pred eEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC---
Q 000410 27 LVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK--- 98 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~--- 98 (1553)
|++.+.||+|+||.||+|... +..||||++.... ......+++.+|..+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI---FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG 77 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc---CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC
Confidence 567889999999999999863 2569999986542 11233455778889999999999999999875432
Q ss_pred ---EEEEEecccc-CCHHHHhcC-----C-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 99 ---AAYLLRQYFF-NSLRDRLST-----P-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 99 ---~~~lV~E~~~-gsL~d~l~~-----~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
..++++||+. |+|.+++.. + ..++...+..++.|++.||+|||++||+||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 78 RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcc
Confidence 3578999998 699887632 1 14788999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|.++....... ........+++.|++||.+. ...++.++|||||||++|||++ |.+||......
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~ 222 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLA----------DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS 222 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHh----------cCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH
Confidence 98875422110 00111223456799999664 3456789999999999999999 78998655433
Q ss_pred HHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 248 AYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
........ .....+...++.+.+++.+||+.+|++||++.++++.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 223 EIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 22211111 1111222345789999999999999999999999998754
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-29 Score=304.11 Aligned_cols=244 Identities=19% Similarity=0.171 Sum_probs=190.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.+.. ......+.+.+|+.+++.++||||+++++++...
T Consensus 18 ~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc---hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 7899999999999999999874 3569999986531 1122345567788999999999999999988543
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|++++++.++|.+++..+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 95 ~~~~lv~~~~~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~ 173 (345)
T cd07877 95 NDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 173 (345)
T ss_pred ccEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc
Confidence 347899999988999888765 4899999999999999999999999999999999999999999999999988754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~ 253 (1553)
.....++..|+|||.+.+ ...++.++||||+||++|+|++|.+||..... ..+.+..
T Consensus 174 ----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (345)
T cd07877 174 ----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234 (345)
T ss_pred ----------ccccccCCCccCHHHHhC---------ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 112346788999997642 23567899999999999999999999963321 1111100
Q ss_pred ------------------------CCCCCC---CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ------------------------YDPSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ------------------------~~~~~~---~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+... .....++.++++|.+||+.||.+||++.++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000 011235679999999999999999999999998
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=303.08 Aligned_cols=244 Identities=19% Similarity=0.240 Sum_probs=191.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-CCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-DKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~~~~~l 102 (1553)
+|++.+.||.|+||.||+|.+.. ..||+|++.+... .....+.+..|.++++.++||||+++++++.. ....|+
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS---TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc---ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 79999999999999999998763 5699998865421 12234556678899999999999999998865 567899
Q ss_pred EeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
++||++++|.+++...+ +++..+..++.||++||.|||++||+||||||.|||++.++.++|+|||.+......
T Consensus 88 v~e~~~~~L~~~~~~~~-~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~----- 161 (328)
T cd07856 88 VTELLGTDLHRLLTSRP-LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ----- 161 (328)
T ss_pred EeehhccCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC-----
Confidence 99999999998887654 788899999999999999999999999999999999999999999999988743111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH--------------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-------------- 248 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-------------- 248 (1553)
.....++..|+|||.+.+ ...++.++||||+||++|+|++|.+||.......
T Consensus 162 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 162 -----MTGYVSTRYYRAPEIMLT---------WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred -----cCCCcccccccCceeeec---------cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 112245678999997531 2357889999999999999999999996432110
Q ss_pred -HHh-------------cCCC---CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -YRR-------------GQYD---PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -~~~-------------~~~~---~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... .... +........++.++++|.+||+.+|++||++++++.|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0000 0000112235789999999999999999999999988
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=296.48 Aligned_cols=252 Identities=21% Similarity=0.255 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
+|++.+.||+|+||.||+++.. +..||||++.+... .........+.+|..++..+ +||||+++++.+..+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~ 79 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI-VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTK 79 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH-HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCE
Confidence 4788999999999999999863 35699999875411 12233445677888899999 59999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.|+||||+. ++|.+++..+..+++.+++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred EEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 999999999 5999999877779999999999999999999999999999999999999999999999999876542221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~ 254 (1553)
.. ......++..|+|||.+.+. ....+.++|+||+|+++|||++|..||... ....+.+...
T Consensus 160 ~~------~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 225 (288)
T cd05583 160 EE------RAYSFCGTIEYMAPEVIRGG--------SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRIL 225 (288)
T ss_pred cc------ccccccCCccccCHHHhcCC--------CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHH
Confidence 10 01123467889999976421 123678999999999999999999998532 1222222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHH---HHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE---SYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~---elL~~ 292 (1553)
......+...+..++++|.+||+.||++|||+. ++|+|
T Consensus 226 ~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 226 KSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 222233444567899999999999999999865 45555
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=300.54 Aligned_cols=245 Identities=17% Similarity=0.178 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|...+.||.|+||.||+|++.. ..+++|.+..... ........+.+|+++++.++|||++++++++......|+|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc--cChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 57788999999999999999854 5699998864311 1223345567788999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.|+|.+.+.. ...+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 94 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----- 168 (308)
T cd06634 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----- 168 (308)
T ss_pred EEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-----
Confidence 99999999887753 445899999999999999999999999999999999999999999999999987644211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~~ 258 (1553)
....+++.|+|||.+... ....++.++|||||||++|+|++|.+||...+. ..+..+.. ..
T Consensus 169 ------~~~~~~~~y~aPE~~~~~-------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~ 233 (308)
T cd06634 169 ------NXFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PA 233 (308)
T ss_pred ------ccccCCccccCHHHHhhc-------ccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC--CC
Confidence 122357789999987421 123567899999999999999999887753321 11222221 11
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+..++++|.+||..+|++||+++++++|
T Consensus 234 ~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 1233456789999999999999999999999998
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=290.43 Aligned_cols=241 Identities=22% Similarity=0.270 Sum_probs=196.0
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||.|+||.||++.+. +..+++|++.+... ........+..|+.+++.++||||+++++.++.+...|+||||++ +
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI--IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh--cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCC
Confidence 699999999999986 46799999876521 122345567788899999999999999999999999999999996 7
Q ss_pred CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeee
Q 000410 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189 (1553)
Q Consensus 110 sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 189 (1553)
+|.+++.....+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+....... ....
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-------~~~~ 151 (250)
T cd05123 79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-------SRTN 151 (250)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-------Cccc
Confidence 999999887779999999999999999999999999999999999999999999999999887552211 1112
Q ss_pred cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHHHH
Q 000410 190 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 269 (1553)
Q Consensus 190 ~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (1553)
...++..|+|||.+. +...+.++|+|||||++|+|++|..||.........+........++...+..+.
T Consensus 152 ~~~~~~~~~~Pe~~~----------~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (250)
T cd05123 152 TFCGTPEYLAPEVLL----------GKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEAR 221 (250)
T ss_pred CCcCCccccChHHhC----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 334677899999764 2346789999999999999999999997555333222222223335555577899
Q ss_pred HHHHHhcccCcCCCCCH---HHHHHh
Q 000410 270 KMILHMIQLEPELRFSA---ESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa---~elL~~ 292 (1553)
++|.+||..||++||++ +++++|
T Consensus 222 ~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 222 DLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred HHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 99999999999999999 888887
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=299.11 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=192.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||.|+||.||+|.+.. ..|++|++...... ......+.+|.++++.++||||+++++++.+..
T Consensus 8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 8 KFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK---EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc---cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 68899999999999999999863 56999998654221 122234566778999999999999999887654
Q ss_pred -----EEEEEeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 99 -----AAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 99 -----~~~lV~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
..|+|+||++++|.+.+... ..+++.++..++.||+.||+|||++||+||||||+||++++++.+||+|||.+.
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence 79999999999998888764 358999999999999999999999999999999999999999999999999887
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA---- 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~---- 248 (1553)
........+ .....++..|+|||.+.+ ...++.++||||+||++|||++|++||.......
T Consensus 165 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~---------~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~ 229 (302)
T cd07864 165 LYNSEESRP------YTNKVITLWYRPPELLLG---------EERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL 229 (302)
T ss_pred cccCCcccc------cccceeccCccChHHhcC---------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 542221111 111234667999997642 2346789999999999999999999997443211
Q ss_pred HHhcCCCC-C-------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQYDP-S-------------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~~-~-------------------------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+....+ . .......+..+.++|.+||+.||.+||+++++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 230 ISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred HHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11100000 0 00111236789999999999999999999999987
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-30 Score=294.58 Aligned_cols=249 Identities=23% Similarity=0.271 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||++++.. ..+++|++...............+..|..+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 48899999999999999998864 3366666543211111111223455677899999999999999999988899999
Q ss_pred ecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+||++ ++|.+++. ....+++.+++.++.|++.||.|||++|++||||||+||+++. +.++|+|||.++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999 59988774 2456899999999999999999999999999999999999975 679999999887653221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPS 257 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~ 257 (1553)
. ......+++.|+|||.+. ...++.++|+||+|+++|+|++|..||............. ...
T Consensus 160 ~-------~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T cd08222 160 D-------LATTFTGTPYYMSPEALK----------HQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPT 222 (260)
T ss_pred c-------cccCCCCCcCccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC
Confidence 1 112344678899999764 2346778999999999999999999997655443322221 222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+..+...+..+.++|.+||..||++||++.++++|
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 223 PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 33445556789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=298.13 Aligned_cols=245 Identities=22% Similarity=0.295 Sum_probs=190.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEEE
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~lV 103 (1553)
|++.+.||+|+||.||+|...+ +.|++|.+.+..... ......+|...++.+. ||||+++++++..+...|+|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 76 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW----EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFV 76 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch----hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEE
Confidence 6788999999999999999853 569999986542211 1122335667888888 99999999999999999999
Q ss_pred eccccCCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+.|+|.+++.... .+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.++.......
T Consensus 77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 77 FEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred EecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 9999999999997654 689999999999999999999999999999999999999999999999998875422111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhc-----
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRG----- 252 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~----- 252 (1553)
.....++..|+|||.+.. ...++.++|+||||++++||++|.+||....... ....
T Consensus 155 ------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (283)
T cd07830 155 ------YTDYVSTRWYRAPEILLR---------STSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPT 219 (283)
T ss_pred ------cCCCCCcccccCceeeec---------CcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCC
Confidence 122345778999997642 2356889999999999999999999996433211 1000
Q ss_pred ------------CC--C----C---CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ------------QY--D----P---SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ------------~~--~----~---~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. . . ........+..++++|.+||+.||++||+++|++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 220 KQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00 0 0 000011124689999999999999999999999987
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=276.65 Aligned_cols=294 Identities=20% Similarity=0.323 Sum_probs=234.4
Q ss_pred CCCCcccCccEeeecc---ccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec
Q 000410 1121 PDSGWRPRGILVAHLQ---EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR 1197 (1553)
Q Consensus 1121 ~~~~W~p~G~lv~~l~---~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~ 1197 (1553)
-+..|+..--++..+. +....|+|+.+ |...++||+.|+||||||..+.+ +...+.+|++.|.|+.|+
T Consensus 176 idsNWr~Gr~~~~rinc~Se~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~------c~~~L~GHtGSVLCLqyd- 246 (499)
T KOG0281|consen 176 IESNWRCGRHLLQRINCRSENSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLE------CLKILTGHTGSVLCLQYD- 246 (499)
T ss_pred hhcchhccceeeeeecCCcccCCceEEEEe--cchhhhcccccCceEEeccccHH------HHHhhhcCCCcEEeeecc-
Confidence 3568986555566654 56789999998 56789999999999999998765 555778999999999995
Q ss_pred CCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCC
Q 000410 1198 HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS 1277 (1553)
Q Consensus 1198 ~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt 1277 (1553)
.+.+++||.|.+|+|||+++. .......+|-+.|..+.|+.+ ++++++.|.+|.+||+..
T Consensus 247 -~rviisGSSDsTvrvWDv~tg--------------e~l~tlihHceaVLhlrf~ng-----~mvtcSkDrsiaVWdm~s 306 (499)
T KOG0281|consen 247 -ERVIVSGSSDSTVRVWDVNTG--------------EPLNTLIHHCEAVLHLRFSNG-----YMVTCSKDRSIAVWDMAS 306 (499)
T ss_pred -ceEEEecCCCceEEEEeccCC--------------chhhHHhhhcceeEEEEEeCC-----EEEEecCCceeEEEeccC
Confidence 459999999999999999851 122334467778888889876 999999999999999988
Q ss_pred Cccc---ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCC
Q 000410 1278 NSNT---WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTA 1354 (1553)
Q Consensus 1278 ~~~~---~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~ 1354 (1553)
...+ ..+.+ |...|+.+.|+. +++++++.|.+|++||+.+...++.+.. |...|.++.+ +
T Consensus 307 ps~it~rrVLvG--HrAaVNvVdfd~--kyIVsASgDRTikvW~~st~efvRtl~g-HkRGIAClQY------------r 369 (499)
T KOG0281|consen 307 PTDITLRRVLVG--HRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNG-HKRGIACLQY------------R 369 (499)
T ss_pred chHHHHHHHHhh--hhhheeeecccc--ceEEEecCCceEEEEeccceeeehhhhc-ccccceehhc------------c
Confidence 7633 44555 899999999975 4999999999999999999999998876 6778888776 5
Q ss_pred CCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccC
Q 000410 1355 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1434 (1553)
Q Consensus 1355 ~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1434 (1553)
++++++|+.|++|++||++.|.|++++.++.. -
T Consensus 370 ~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEe-----------------------------------------------L 402 (499)
T KOG0281|consen 370 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-----------------------------------------------L 402 (499)
T ss_pred CeEEEecCCCceEEEEeccccHHHHHHhchHH-----------------------------------------------h
Confidence 78999999999999999999999888864432 5
Q ss_pred cEEeccCCCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhh
Q 000410 1435 IRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1514 (1553)
Q Consensus 1435 V~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1514 (1553)
|+|+.| .+.+|++|+.||+|++||+..+...+..++.- + -
T Consensus 403 vRciRF-d~krIVSGaYDGkikvWdl~aaldpra~~~~~--------C-------------------------l------ 442 (499)
T KOG0281|consen 403 VRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--------C-------------------------L------ 442 (499)
T ss_pred hhheee-cCceeeeccccceEEEEecccccCCcccccch--------H-------------------------H------
Confidence 899998 45689999999999999998765543222100 0 0
Q ss_pred hhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1515 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1515 ~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
..+..|.+.|-.+ . .+..-|+|++.|.+|-||+
T Consensus 443 ---~~lv~hsgRVFrL-Q--FD~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 443 ---RTLVEHSGRVFRL-Q--FDEFQIISSSHDDTILIWD 475 (499)
T ss_pred ---HhhhhccceeEEE-e--ecceEEEeccCCCeEEEEE
Confidence 0011288888877 3 4666799999999999996
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-29 Score=293.38 Aligned_cols=243 Identities=19% Similarity=0.217 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|...+.||+|++|.||++.+.. ..+++|++.... ....+.+.+|+.+++.++||||+++++++...+..|++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEE
Confidence 56667899999999999998753 669999875431 22334567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||+. ++|.+++.. ..+++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+...... .+
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~--~~- 170 (285)
T cd06648 95 MEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE--VP- 170 (285)
T ss_pred EeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC--Cc-
Confidence 99998 599999887 55899999999999999999999999999999999999999999999999987643211 11
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
......|++.|+|||.+. +..++.++||||+||++|+|++|.+||...+... .... ..+..
T Consensus 171 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~ 235 (285)
T cd06648 171 ----RRKSLVGTPYWMAPEVIS----------RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKL 235 (285)
T ss_pred ----ccccccCCccccCHHHhc----------CCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCC
Confidence 112234678899999764 3357889999999999999999988886543222 1222 11111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+..+.++|.+||+.||++||++.++++|
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 236 KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 1122245789999999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=292.24 Aligned_cols=249 Identities=16% Similarity=0.214 Sum_probs=194.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---ceEEEEEEeccCCC-----cCHHHHHHHHHHHHHHHh-cCCCCCeeEEEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---GLVLVKVYFKRGDY-----IDLREYERRLFHIRETFR-SIDHPHVWAFQFWQET 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---~~vavKv~~~~~~~-----~~~~~~~~~l~~e~~~l~-~l~hpnIv~~~~~~~~ 96 (1553)
+|++.+.||+|+||.||++.+.. ..+|+|.+...... ........++..|..++. .++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999865 56999988643111 122233344556666665 4799999999999999
Q ss_pred CCEEEEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 97 DKAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
++..|++|||++ ++|.+++. ....+++..++.++.|++.||.|||+ .|++||||||+||++++++.++|+|||.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 999999999999 48988773 33458999999999999999999996 7899999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR 250 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~ 250 (1553)
+....... ......++..|+|||.+. ...++.++|+|||||++|+|++|.+||.........
T Consensus 161 ~~~~~~~~--------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~ 222 (269)
T cd08528 161 AKQKQPES--------KLTSVVGTILYSCPEIVK----------NEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA 222 (269)
T ss_pred eeeccccc--------ccccccCcccCcChhhhc----------CCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHH
Confidence 87542211 122344678899999764 345788999999999999999999999765443322
Q ss_pred ----hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 251 ----RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 251 ----~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...+.+ ......++.+.++|.+||+.||++||++.|+..+++
T Consensus 223 ~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 223 TKIVEAVYEP--LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHhhccCCc--CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 222221 122245678999999999999999999999988753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.6e-29 Score=320.49 Aligned_cols=244 Identities=17% Similarity=0.225 Sum_probs=200.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--c-----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G-----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~-----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
..++.+.||+|.||.||.|...+ + .||+|.+.+. ...+...+|.+|..+|+.++||||+++++++.+..
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~----~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL----SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc----CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 68899999999999999998754 3 2888887554 33556677889999999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP-------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~-------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
..+|++|||+ |+|..+|++. ..|+..+...++.||++|.+||+++++|||||-..|+|++....|||+|||+
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 9999999999 6999999765 2489999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCC--CCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|+.++..+ ++..... -...|||||.|. .+.++.|+|||||||+|||+|+ |..||....-.
T Consensus 849 ArDiy~~~-------yyr~~~~a~lPvkWm~PEsl~----------d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~ 911 (1025)
T KOG1095|consen 849 ARDIYDKD-------YYRKHGEAMLPVKWMPPESLK----------DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF 911 (1025)
T ss_pred hHhhhhch-------heeccCccccceecCCHHHHh----------hcccccccchhhhHHHHHHHHhCCCCCCCCcchH
Confidence 99554221 1211111 134699999875 4689999999999999999998 59999654332
Q ss_pred H----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 248 A----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 248 ~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+ +..+. .-..+...++.+.+++..||+.+|++||++..++++.
T Consensus 912 ~v~~~~~~gg---RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 912 EVLLDVLEGG---RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred HHHHHHHhCC---ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 2 33333 2223444556788999999999999999999999864
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=295.27 Aligned_cols=246 Identities=23% Similarity=0.313 Sum_probs=195.1
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||+|+||.||+|++.. ..+++|++.... ......+.+..|+.+++.++||||+++++++.+....|+||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 77 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN---EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVF 77 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc---ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEe
Confidence 5677899999999999999864 679999997652 11233445667788999999999999999999999999999
Q ss_pred ccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||++++|.+++... ..+++.++..++.|++.||+|||++||+||||+|+||+++.++.++|+|||.++.......
T Consensus 78 e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---- 153 (282)
T cd07829 78 EYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR---- 153 (282)
T ss_pred cCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc----
Confidence 99999999999876 4699999999999999999999999999999999999999999999999998875532211
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----Hh--------
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RR-------- 251 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~-------- 251 (1553)
......++..|+|||.+.. ...++.++|+|||||++|||++|.+||........ ..
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (282)
T cd07829 154 ---TYTHEVVTLWYRAPEILLG---------SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEE 221 (282)
T ss_pred ---ccCccccCcCcCChHHhcC---------CcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHH
Confidence 1122234677999997642 23578899999999999999999999975432211 00
Q ss_pred ------------cCCCC-----C-CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ------------GQYDP-----S-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ------------~~~~~-----~-~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.. . ..++.. +..+.++|.+||..||++||+++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 222 SWPGVTKLPDYKPTFPKFPPKDLEKVLPRL-DPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred HHHhhcccccccccccccCccchHHhcccc-cHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000 0 011122 5689999999999999999999999988
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=324.11 Aligned_cols=145 Identities=20% Similarity=0.274 Sum_probs=130.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||+||+|.+. ++.||||++.+... ........+..|+.+++.++||||+++++++......|||
T Consensus 5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM--INKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc--cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 7999999999999999999997 46799999965421 2234456788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
|||+. ++|.+++...+.+++..++.|+.||+.||+|||.+||+||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99997 6999999877789999999999999999999999999999999999999999999999999876
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=275.18 Aligned_cols=289 Identities=17% Similarity=0.278 Sum_probs=222.6
Q ss_pred ccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCc
Q 000410 1178 RSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA 1257 (1553)
Q Consensus 1178 ~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s 1257 (1553)
++...+.+|++.|.|+.|+|+|..+|+|+.|-++++||+++.. ....-..|...|.|++|+|+
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT--------------p~~t~KgH~~WVlcvawsPD--- 168 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET--------------PLFTCKGHKNWVLCVAWSPD--- 168 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC--------------cceeecCCccEEEEEEECCC---
Confidence 4556778999999999999999999999999999999998522 12223468889999999999
Q ss_pred ceEEEEEeCCceEEEEeCCCCccc-ceeccCCCCcceEEEEEcC-----CCCEEEEEeCCCcEEEEeCCCCcccceeecc
Q 000410 1258 SHMFMYSTQNCGIHLWDTRSNSNT-WTLKAIPEEGYVSSLVTGP-----CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS 1331 (1553)
Q Consensus 1258 ~~~l~~~s~dg~I~iwDlrt~~~~-~~l~~~~h~g~Itsl~~sp-----~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~ 1331 (1553)
+..|++|+.||.|++||..+|+++ ..|.+ |...|++++|.| ..+.|++++.||.++|||+.-+.++..+..
T Consensus 169 gk~iASG~~dg~I~lwdpktg~~~g~~l~g--H~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsg- 245 (480)
T KOG0271|consen 169 GKKIASGSKDGSIRLWDPKTGQQIGRALRG--HKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSG- 245 (480)
T ss_pred cchhhccccCCeEEEecCCCCCcccccccC--cccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEecc-
Confidence 789999999999999999999875 46655 999999999976 457999999999999999999989888775
Q ss_pred ccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCccccc--------CCC
Q 000410 1332 QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFA--------RPS 1403 (1553)
Q Consensus 1332 ~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~--------~p~ 1403 (1553)
|..+|++++| .. ..++++|+.|++|++|+...|.|.+.+.++.. .++.+..+-+ .|.
T Consensus 246 HT~~VTCvrw-GG----------~gliySgS~DrtIkvw~a~dG~~~r~lkGHah----wvN~lalsTdy~LRtgaf~~t 310 (480)
T KOG0271|consen 246 HTASVTCVRW-GG----------EGLIYSGSQDRTIKVWRALDGKLCRELKGHAH----WVNHLALSTDYVLRTGAFDHT 310 (480)
T ss_pred CccceEEEEE-cC----------CceEEecCCCceEEEEEccchhHHHhhcccch----heeeeeccchhhhhccccccc
Confidence 7779999999 22 24899999999999999999999988886543 2222211100 000
Q ss_pred CCC-CCC----------------cccccc--ccccccc---------cccCCCCCCccCcEEeccCCCC-eEEEccCCCe
Q 000410 1404 SRS-NPK----------------TDLRRN--VNQKYRV---------DELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLK 1454 (1553)
Q Consensus 1404 ~~~-~~~----------------~~~~~~--~~~~~~~---------~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~ 1454 (1553)
... .+. ....+. ..+++.+ ..+...++|..-|+.+.|+||+ .+++++-|..
T Consensus 311 ~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkS 390 (480)
T KOG0271|consen 311 GRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKS 390 (480)
T ss_pred cccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccc
Confidence 000 000 000000 0122221 1223457888899999999999 5669999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeee
Q 000410 1455 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1534 (1553)
Q Consensus 1455 IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1534 (1553)
||+||-.+++... .+++|.+.|..| +|+
T Consensus 391 VkLW~g~tGk~la---------------------------------------------------sfRGHv~~VYqv-aws 418 (480)
T KOG0271|consen 391 VKLWDGRTGKFLA---------------------------------------------------SFRGHVAAVYQV-AWS 418 (480)
T ss_pred eeeeeCCCcchhh---------------------------------------------------hhhhccceeEEE-Eec
Confidence 9999988765432 234599999999 699
Q ss_pred cCCcEEEEEcCCceEEEcC
Q 000410 1535 LNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1535 ~~~~~LvSas~DG~IkVWk 1553 (1553)
.+.++|||||.|.++|||+
T Consensus 419 aDsRLlVS~SkDsTLKvw~ 437 (480)
T KOG0271|consen 419 ADSRLLVSGSKDSTLKVWD 437 (480)
T ss_pred cCccEEEEcCCCceEEEEE
Confidence 9999999999999999995
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.8e-30 Score=303.97 Aligned_cols=236 Identities=23% Similarity=0.295 Sum_probs=189.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHh-cCCCCCeeEEEEEEEeCCEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFR-SIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~-~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
-+|.+...+|.|+|+.|-.|.+.. ...++|++.+.... ..+|..++. .-+||||+++++++.++...|
T Consensus 322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~---------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD---------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred hhhccccccCCCCccceeeeeccccccchhheeccccccc---------cccccchhhhhcCCCcceeecceecCCceee
Confidence 378888899999999999998854 56999999776211 122223333 347999999999999999999
Q ss_pred EEeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEE-ecCCcEEEeecCccccccCCCC
Q 000410 102 LLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV-TSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 102 lV~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv-~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
+|||++.| -|.+++...+... .++..|+.||+.|+.|||++||+||||||+|||+ ++.|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 99999995 7777777666555 8888899999999999999999999999999999 58899999999999865211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHhcCCCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRRGQYDPSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~~~~~~~~ 258 (1553)
..+.+-|..|.|||++. ...|++++||||||++||+|++|..||....- ..+......+.
T Consensus 470 --------~~tp~~t~~y~APEvl~----------~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~- 530 (612)
T KOG0603|consen 470 --------CDTPALTLQYVAPEVLA----------IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK- 530 (612)
T ss_pred --------hcccchhhcccChhhhc----------cCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc-
Confidence 34445577899999664 55799999999999999999999999964322 23333222222
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+....+..+++||.+||+.||.+|+++.+++.|
T Consensus 531 -~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 531 -FSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred -cccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 225667899999999999999999999999998
|
|
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=295.41 Aligned_cols=247 Identities=21% Similarity=0.271 Sum_probs=194.3
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||.|++|.||+|.+. +..+++|.+..... .......+.+|..+++.++||||+++++++..+...|+|+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 77 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE---SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVF 77 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc---cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEE
Confidence 466789999999999999985 35699998865421 1234456777888999999999999999999999999999
Q ss_pred ccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||++++|.+++..+ ..+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.....+.
T Consensus 78 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 78 EFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred eccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 99999999988764 468999999999999999999999999999999999999999999999999887553221
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCC---
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDP--- 256 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~--- 256 (1553)
.......++..|+|||.+.+ ...++.++|+||+||++|+|++|++||...+... .......+
T Consensus 153 --~~~~~~~~~~~~~~PE~~~~---------~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (283)
T cd05118 153 --RPYTHYVVTRWYRAPELLLG---------DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPE 221 (283)
T ss_pred --ccccCccCcccccCcHHHhc---------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchH
Confidence 01112335677999997642 2357889999999999999999999996433211 11000000
Q ss_pred -----------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 -----------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 -----------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........+..++++|.+||+.||.+||++++++.|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 222 VWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000111235789999999999999999999999988
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=294.12 Aligned_cols=243 Identities=19% Similarity=0.204 Sum_probs=190.9
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|.....||+|+||.||++... +..||+|++... .......+.+|..+++.++||||+++++.+..++..|++|
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 96 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR-----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 96 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc-----chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEE
Confidence 333468999999999999885 366999987432 1233456778888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||++ ++|.+++... .+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++........ .
T Consensus 97 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~---~ 172 (292)
T cd06657 97 EFLEGGALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP---R 172 (292)
T ss_pred ecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc---c
Confidence 9999 4888877554 589999999999999999999999999999999999999999999999998764422110 0
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH---HhcCCCCCCCC
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY---RRGQYDPSQHL 260 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~---~~~~~~~~~~~ 260 (1553)
.....+++.|+|||.+. ...++.++|+||+||++|+|++|.+||........ ...........
T Consensus 173 ----~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T cd06657 173 ----RKSLVGTPYWMAPELIS----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKN 238 (292)
T ss_pred ----ccccccCccccCHHHhc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCC
Confidence 11234678899999763 23567899999999999999999999865433221 11112111111
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+..+.+++.+||+.||.+||+++++++|
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 22345789999999999999999999999997
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.2e-28 Score=255.41 Aligned_cols=303 Identities=20% Similarity=0.264 Sum_probs=238.1
Q ss_pred cEeeeccccccCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~-~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D 1208 (1553)
.+..++.+|.+.|+.++..+.+ ..++++|.|.++-+|++.+.+.. .-.....+.+|+..|..+..+++|+..+++|.|
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~-~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD 84 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIK-YGVPVRRLTGHSHFVSDVVLSSDGNFALSASWD 84 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccc-cCceeeeeeccceEecceEEccCCceEEecccc
Confidence 4568999999999999998874 69999999999999999875321 223556788999999999999999999999999
Q ss_pred CcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCC
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1288 (1553)
Q Consensus 1209 G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~ 1288 (1553)
|++++||+.+. .......+|...|.+++|+++ ...+++|+.|.+|.+|+.. +.+..++....
T Consensus 85 ~~lrlWDl~~g--------------~~t~~f~GH~~dVlsva~s~d---n~qivSGSrDkTiklwnt~-g~ck~t~~~~~ 146 (315)
T KOG0279|consen 85 GTLRLWDLATG--------------ESTRRFVGHTKDVLSVAFSTD---NRQIVSGSRDKTIKLWNTL-GVCKYTIHEDS 146 (315)
T ss_pred ceEEEEEecCC--------------cEEEEEEecCCceEEEEecCC---CceeecCCCcceeeeeeec-ccEEEEEecCC
Confidence 99999999741 223345578888999999999 6799999999999999997 45666666555
Q ss_pred CCcceEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000410 1289 EEGYVSSLVTGPC--GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1289 h~g~Itsl~~sp~--g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~ 1366 (1553)
+.+.|+|++|+|+ ..++++++.|++|++||++..+....+.. |..-++.+.+ +++|..+++|+.||+
T Consensus 147 ~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g-h~~~v~t~~v----------SpDGslcasGgkdg~ 215 (315)
T KOG0279|consen 147 HREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIG-HSGYVNTVTV----------SPDGSLCASGGKDGE 215 (315)
T ss_pred CcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcccc-ccccEEEEEE----------CCCCCEEecCCCCce
Confidence 6889999999997 67899999999999999998877666554 5555666655 445668899999999
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeE
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDL 1446 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~l 1446 (1553)
+.+||+..+++.+.+.. ...|++++|+|+...
T Consensus 216 ~~LwdL~~~k~lysl~a------------------------------------------------~~~v~sl~fspnryw 247 (315)
T KOG0279|consen 216 AMLWDLNEGKNLYSLEA------------------------------------------------FDIVNSLCFSPNRYW 247 (315)
T ss_pred EEEEEccCCceeEeccC------------------------------------------------CCeEeeEEecCCcee
Confidence 99999999998777641 126999999999988
Q ss_pred EEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccc
Q 000410 1447 LTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1526 (1553)
Q Consensus 1447 lTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1526 (1553)
+.++.+-.|++||+.+......+. .+..++ ..+.-.-.
T Consensus 248 L~~at~~sIkIwdl~~~~~v~~l~---~d~~g~---------------------------------------s~~~~~~~ 285 (315)
T KOG0279|consen 248 LCAATATSIKIWDLESKAVVEELK---LDGIGP---------------------------------------SSKAGDPI 285 (315)
T ss_pred EeeccCCceEEEeccchhhhhhcc---cccccc---------------------------------------ccccCCcE
Confidence 888888889999998654433222 111000 00001112
Q ss_pred eeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1527 ILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1527 I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-+++ +|+.+|.-|.+|-.||.|+||.
T Consensus 286 clsl-aws~dG~tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 286 CLSL-AWSADGQTLFAGYTDNVIRVWQ 311 (315)
T ss_pred EEEE-EEcCCCcEEEeeecCCcEEEEE
Confidence 3455 6899999999999999999994
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-30 Score=289.27 Aligned_cols=261 Identities=17% Similarity=0.177 Sum_probs=207.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEecc--CCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-CCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKR--GDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-DKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~--~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~~~~ 100 (1553)
+|-++..||+|+|+.||+|.+-. +.||||+-... ......+.|.+...+|.+|-+.|+||.||++|++|.- .+.+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 67788899999999999998853 67999986543 2223345567778889999999999999999999954 4568
Q ss_pred EEEeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCcEEEec---CCcEEEeecCccccc
Q 000410 101 YLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--GICHGDIKCENVLVTS---WNWLYLSDFASFKPT 174 (1553)
Q Consensus 101 ~lV~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~--gIvHrDIKp~NILv~~---~~~vkL~DFG~a~~~ 174 (1553)
|-|+|||+| +|.-||+....+++.+++.|+.||+.||.||.+. .|+|-||||.|||+.+ .|.+||+|||+++..
T Consensus 544 CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM 623 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM 623 (775)
T ss_pred eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence 999999997 8888999998999999999999999999999986 5999999999999964 468999999999987
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH-HHHh--
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL-AYRR-- 251 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~-~~~~-- 251 (1553)
.....+..+.......+.||.||++||.|.-.. ....++.++||||+|+|+|.++.|+.||...+.. ++.+
T Consensus 624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgk------ePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGK------EPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred cCCccCcccceeeecccCceeeecCcceeecCC------CCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 655555555555566778999999999986221 1346789999999999999999999999643321 1111
Q ss_pred cCCC-CCCCC--CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYD-PSQHL--EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~-~~~~~--~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... ....+ ....+.+.+++|++||++.-++|....++..+
T Consensus 698 TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 698 TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 1111 11112 23456789999999999999999999988876
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=291.89 Aligned_cols=255 Identities=17% Similarity=0.180 Sum_probs=203.1
Q ss_pred cCCCccceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 20 DLPSSYNLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 20 ~l~~~~~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
++|.+ ...++++||+|-||.|.+|...+ ..||||.+... ........|.+|+++|.+|+||||++++++|..++
T Consensus 534 EfPRs-~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~----a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De 608 (807)
T KOG1094|consen 534 EFPRS-RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD----ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD 608 (807)
T ss_pred hcchh-heehhhhhcCcccceeEEEEecCceEEEEeecCcc----cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC
Confidence 34443 57889999999999999999988 66999998543 33445678999999999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
.+++|+||++ |+|.+++... +.+.......|+.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++..+
T Consensus 609 PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccc
Confidence 9999999999 8999999876 444566677899999999999999999999999999999999999999999998665
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC--CCCCCchHHHHHHh--
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE--VPFFELSHLLAYRR-- 251 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg--~~pf~~~~~~~~~~-- 251 (1553)
... +...-+...-...|||||.+. .++++.++|+|++|+++||+++- ..||..-.-.+..+
T Consensus 689 sg~-----yy~vqgr~vlpiRwmawEsil----------lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~ 753 (807)
T KOG1094|consen 689 SGD-----YYRVQGRAVLPIRWMAWESIL----------LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA 753 (807)
T ss_pred cCC-----ceeeecceeeeeeehhHHHHH----------hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh
Confidence 332 111111222246799999775 45789999999999999999764 77885333222221
Q ss_pred -cCCC-----CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 252 -GQYD-----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 252 -~~~~-----~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..++ .-...+...+..+.+++.+||..|-++||+++++-.++.
T Consensus 754 ~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 754 GEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred hhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 1111 112245566778999999999999999999999988764
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=262.57 Aligned_cols=334 Identities=15% Similarity=0.225 Sum_probs=262.4
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
-+.+|.+|++.|.+++.+|+..+.|||+.|....||++.+++ -.....+|...|+|+.|+.+|.+||+|+-+|.
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge------~~~eltgHKDSVt~~~FshdgtlLATGdmsG~ 129 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE------FAGELTGHKDSVTCCSFSHDGTLLATGDMSGK 129 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc------ceeEecCCCCceEEEEEccCceEEEecCCCcc
Confidence 367899999999999999999999999999999999999987 34567789999999999999999999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
|+||++.+.. ...... .+..-+..+.|||. +..|++|+.||.+.+|.+..+...+.+.+ |.
T Consensus 130 v~v~~~stg~-------------~~~~~~-~e~~dieWl~WHp~---a~illAG~~DGsvWmw~ip~~~~~kv~~G--h~ 190 (399)
T KOG0296|consen 130 VLVFKVSTGG-------------EQWKLD-QEVEDIEWLKWHPR---AHILLAGSTDGSVWMWQIPSQALCKVMSG--HN 190 (399)
T ss_pred EEEEEcccCc-------------eEEEee-cccCceEEEEeccc---ccEEEeecCCCcEEEEECCCcceeeEecC--CC
Confidence 9999997411 111111 34556677899998 67999999999999999998877777766 89
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000410 1291 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1291 g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vW 1370 (1553)
.++++-.|.|+|+.+++|..||+|++||+.++.++.........+.+++.+ +..+..++.|+.++.+.+-
T Consensus 191 ~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~----------~~~~~~~~~g~~e~~~~~~ 260 (399)
T KOG0296|consen 191 SPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISL----------NLAGSTLTKGNSEGVACGV 260 (399)
T ss_pred CCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCcccc----------ccccceeEeccCCccEEEE
Confidence 999999999999999999999999999999998887776544333333333 3345678888888999999
Q ss_pred EcCCCcEEEEEecccC-------CCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCC
Q 000410 1371 NAENGSCHQVLRTANY-------DGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1443 (1553)
Q Consensus 1371 Dl~tg~~~~~l~~~~~-------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~ 1443 (1553)
+..+|+.+.+...... ...-+++.++++-.-|+.+......+. ...+++...+.....|..+|..+.|.++
T Consensus 261 ~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i--~iyD~a~~~~R~~c~he~~V~~l~w~~t 338 (399)
T KOG0296|consen 261 NNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTI--AIYDLAASTLRHICEHEDGVTKLKWLNT 338 (399)
T ss_pred ccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceE--EEEecccchhheeccCCCceEEEEEcCc
Confidence 9888888777763111 112234445555444555443322111 1233333444555677788999999997
Q ss_pred CeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCC
Q 000410 1444 GDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1523 (1553)
Q Consensus 1444 g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1523 (1553)
..|+|+..||+||.||.+++...+.+.| |
T Consensus 339 ~~l~t~c~~g~v~~wDaRtG~l~~~y~G---------------------------------------------------H 367 (399)
T KOG0296|consen 339 DYLLTACANGKVRQWDARTGQLKFTYTG---------------------------------------------------H 367 (399)
T ss_pred chheeeccCceEEeeeccccceEEEEec---------------------------------------------------C
Confidence 7999999999999999998876665544 9
Q ss_pred ccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1524 RDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1524 ~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+..|.++ +..+++++++|+|.|++.+||+
T Consensus 368 ~~~Il~f-~ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 368 QMGILDF-ALSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred chheeEE-EEcCCCcEEEEecCCCeEEEEe
Confidence 9999999 6899999999999999999985
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=291.64 Aligned_cols=254 Identities=18% Similarity=0.206 Sum_probs=196.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
-|+.++.||-|+||+|.+++..+ ..||+|.+.|.+- -.......++.|++||...+.+.||++|-.|++++.+|+|
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDV--l~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADV--LMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHH--HhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 58889999999999999998755 5599999977632 2233445678899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc--------
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT-------- 174 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~-------- 174 (1553)
|+|++ |++-.+|-+-+.++|..+++++..|.+|+++.|..|+|||||||+|||||.+|++||+|||++.-.
T Consensus 708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 99999 599999988899999999999999999999999999999999999999999999999999987532
Q ss_pred cCCCCCCC-----------Ccce----------------eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHH
Q 000410 175 YIPYDDPS-----------DFSF----------------FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 227 (1553)
Q Consensus 175 ~~~~~~~~-----------~~~~----------------~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 227 (1553)
+...+... +.+. ......||+.|+|||++. ...|+..+|.||.
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~----------r~g~~q~cdwws~ 857 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA----------RTGYTQLCDWWSV 857 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc----------ccCccccchhhHh
Confidence 11111110 0000 011235899999999875 3457888999999
Q ss_pred HHHHHHHHcCCCCCCchHHHH--HHhcCCCC--CCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHHHh
Q 000410 228 GCVIAELFLEVPFFELSHLLA--YRRGQYDP--SQHLEKIPDSGIRKMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 228 G~il~eLltg~~pf~~~~~~~--~~~~~~~~--~~~~~~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
|+|||||+.|++||....... ++-..+.. ........++++.+||.++.. +++.|. .++|+-.|
T Consensus 858 gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAH 928 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcC
Confidence 999999999999996443221 12122221 112233456889999988764 678888 45667666
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=284.15 Aligned_cols=223 Identities=17% Similarity=0.184 Sum_probs=176.2
Q ss_pred cCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-CCHH
Q 000410 36 SRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-NSLR 112 (1553)
Q Consensus 36 G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-gsL~ 112 (1553)
|.|++||++++.. +.||+|++.+... ..++...+....||||+++++++......|+||||++ |+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence 8999999999854 5699999865421 1122233444569999999999999999999999999 5999
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCC
Q 000410 113 DRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG 192 (1553)
Q Consensus 113 d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 192 (1553)
+++...+.+++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+...... .....
T Consensus 74 ~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------~~~~~ 143 (237)
T cd05576 74 SHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------CDGEA 143 (237)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----------cccCC
Confidence 99987777999999999999999999999999999999999999999999999999977543211 11223
Q ss_pred CCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q 000410 193 KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMI 272 (1553)
Q Consensus 193 gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LI 272 (1553)
++..|+|||.+. ...++.++|+||+||++|||++|.+||........ ......++...++.++++|
T Consensus 144 ~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li 209 (237)
T cd05576 144 VENMYCAPEVGG----------ISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----THTTLNIPEWVSEEARSLL 209 (237)
T ss_pred cCccccCCcccC----------CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----cccccCCcccCCHHHHHHH
Confidence 456799999653 34578899999999999999999888764321100 0111123445567899999
Q ss_pred HHhcccCcCCCCCH-----HHHHHh
Q 000410 273 LHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 273 ~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
.+||+.||++||++ +++++|
T Consensus 210 ~~~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 210 QQLLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred HHHccCCHHHhcCCCccchHHHHcC
Confidence 99999999999986 788877
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-29 Score=275.49 Aligned_cols=282 Identities=15% Similarity=0.233 Sum_probs=236.2
Q ss_pred ccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEe
Q 000410 1137 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1216 (1553)
Q Consensus 1137 ~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi 1216 (1553)
.-+.+|+.|.|.|+|+.|+|||..|.+.+|+..... .....+.|...|.++.|++++..+++|+.+|.|++|+.
T Consensus 94 Kvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fn------FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqp 167 (464)
T KOG0284|consen 94 KVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFN------FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQP 167 (464)
T ss_pred ccccceeeEEEcCCCceeEeecccccEEEecCceee------HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEeccc
Confidence 345689999999999999999999999999985433 44566789999999999999999999999999999988
Q ss_pred eecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEE
Q 000410 1217 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1296 (1553)
Q Consensus 1217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1296 (1553)
.. ..+......|...|.+++|+|+ ...+++|+.||+|++||.+..+....+.+ |...|+|+
T Consensus 168 nm--------------nnVk~~~ahh~eaIRdlafSpn---DskF~t~SdDg~ikiWdf~~~kee~vL~G--HgwdVksv 228 (464)
T KOG0284|consen 168 NM--------------NNVKIIQAHHAEAIRDLAFSPN---DSKFLTCSDDGTIKIWDFRMPKEERVLRG--HGWDVKSV 228 (464)
T ss_pred ch--------------hhhHHhhHhhhhhhheeccCCC---CceeEEecCCCeEEEEeccCCchhheecc--CCCCccee
Confidence 62 1223334456688999999997 45999999999999999999999888866 88889999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCc
Q 000410 1297 VTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS 1376 (1553)
Q Consensus 1297 ~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~ 1376 (1553)
+|+|....+++|+.|..|++||.|++.++.++.. |...|..+.| .| ++++++++|.|..++++|+++.+
T Consensus 229 dWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~-HKntVl~~~f-~~---------n~N~Llt~skD~~~kv~DiR~mk 297 (464)
T KOG0284|consen 229 DWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHG-HKNTVLAVKF-NP---------NGNWLLTGSKDQSCKVFDIRTMK 297 (464)
T ss_pred ccCCccceeEEccCCceeEeecCCCcchhhhhhh-ccceEEEEEE-cC---------CCCeeEEccCCceEEEEehhHhH
Confidence 9999999999999999999999999999999876 6667888877 44 45799999999999999999776
Q ss_pred EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC--eEEEccCCCe
Q 000410 1377 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLTGGTDLK 1454 (1553)
Q Consensus 1377 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g--~llTgg~Dg~ 1454 (1553)
.+.+++. |...|+++.|+|-. .+.+||+||.
T Consensus 298 El~~~r~-----------------------------------------------Hkkdv~~~~WhP~~~~lftsgg~Dgs 330 (464)
T KOG0284|consen 298 ELFTYRG-----------------------------------------------HKKDVTSLTWHPLNESLFTSGGSDGS 330 (464)
T ss_pred HHHHhhc-----------------------------------------------chhhheeeccccccccceeeccCCCc
Confidence 5555543 33368999999944 6779999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeee
Q 000410 1455 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1534 (1553)
Q Consensus 1455 IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1534 (1553)
|.+|.+...+. ......+|...|+++ .++
T Consensus 331 vvh~~v~~~~p--------------------------------------------------~~~i~~AHd~~iwsl-~~h 359 (464)
T KOG0284|consen 331 VVHWVVGLEEP--------------------------------------------------LGEIPPAHDGEIWSL-AYH 359 (464)
T ss_pred eEEEecccccc--------------------------------------------------ccCCCcccccceeee-ecc
Confidence 99999862111 011223499999999 799
Q ss_pred cCCcEEEEEcCCceEEEc
Q 000410 1535 LNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1535 ~~~~~LvSas~DG~IkVW 1552 (1553)
|-|.+|+|||.|.++++|
T Consensus 360 PlGhil~tgsnd~t~rfw 377 (464)
T KOG0284|consen 360 PLGHILATGSNDRTVRFW 377 (464)
T ss_pred ccceeEeecCCCcceeee
Confidence 999999999999999999
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.8e-30 Score=307.91 Aligned_cols=247 Identities=24% Similarity=0.283 Sum_probs=195.3
Q ss_pred EEEEEeeccCcE-EEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEec
Q 000410 28 VLKEVLGGSRFF-KSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 28 ~~~~~LG~G~fg-~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
.-.+.+|.|+-| .||+|...++.||||.+. .+......+|+..|+.- +||||++||+.-.++...||..|
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll--------~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVYEGREVAVKRLL--------EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred ccHHHcccCCCCcEEEEEeeCCceehHHHHh--------hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 334578888887 589999999999999874 34555677888888776 59999999999999999999999
Q ss_pred cccCCHHHHhcCC--C--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec---CC--cEEEeecCccccccC
Q 000410 106 YFFNSLRDRLSTP--P--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS---WN--WLYLSDFASFKPTYI 176 (1553)
Q Consensus 106 ~~~gsL~d~l~~~--~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~---~~--~vkL~DFG~a~~~~~ 176 (1553)
.|..+|.|++... . .....+.+.++.|++.||+|||+.+||||||||.||||+. ++ .++|+|||++|....
T Consensus 584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 9999999999773 1 1222566788999999999999999999999999999987 33 699999999997632
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCch--HHHHHHhcC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELS--HLLAYRRGQ 253 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~--~~~~~~~~~ 253 (1553)
++..+.. ..+..||-+|+|||++... .-+.++|||||||++|+.++| ..||... ....+..+.
T Consensus 664 ---~~sS~~r-~s~~sGt~GW~APE~L~~~----------~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~ 729 (903)
T KOG1027|consen 664 ---GKSSFSR-LSGGSGTSGWQAPEQLRED----------RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN 729 (903)
T ss_pred ---Ccchhhc-ccCCCCcccccCHHHHhcc----------ccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc
Confidence 2233333 4566789999999988633 234589999999999999998 9999643 333455555
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCc
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSP 304 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~ 304 (1553)
+.... +....+.+.++||.+||..||..||+|.++|.| |.|++
T Consensus 730 ~~L~~-L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H-------PlFW~ 772 (903)
T KOG1027|consen 730 YTLVH-LEPLPDCEAKDLISRMLNPDPQLRPSATDVLNH-------PLFWD 772 (903)
T ss_pred cceee-eccCchHHHHHHHHHhcCCCcccCCCHHHHhCC-------CccCC
Confidence 54322 222333389999999999999999999999999 66665
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=277.97 Aligned_cols=276 Identities=20% Similarity=0.296 Sum_probs=221.7
Q ss_pred CCCCCcccccCCCCCCcccCc-cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCC
Q 000410 1109 TGLPSFVRTSSIPDSGWRPRG-ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEG 1187 (1553)
Q Consensus 1109 ~g~~~~~~~~~~~~~~W~p~G-~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~ 1187 (1553)
+|......+.+....+|+-.+ ..-..+++|..+|.++.|++++.+++||+.||+||+|+..-.. ....+..|.
T Consensus 107 eGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn------Vk~~~ahh~ 180 (464)
T KOG0284|consen 107 EGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN------VKIIQAHHA 180 (464)
T ss_pred CCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh------hHHhhHhhh
Confidence 444333333334467898542 3345678999999999999999999999999999999987533 222334455
Q ss_pred CceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCC
Q 000410 1188 SRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN 1267 (1553)
Q Consensus 1188 ~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~d 1267 (1553)
..|.|++|+|+...|++||+||+|+|||..... -.....+|+.-|.++.|+|. ..++++++.|
T Consensus 181 eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k--------------ee~vL~GHgwdVksvdWHP~---kgLiasgskD 243 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK--------------EERVLRGHGWDVKSVDWHPT---KGLIASGSKD 243 (464)
T ss_pred hhhheeccCCCCceeEEecCCCeEEEEeccCCc--------------hhheeccCCCCcceeccCCc---cceeEEccCC
Confidence 789999999999999999999999999986311 11122578889999999998 6699999999
Q ss_pred ceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCC
Q 000410 1268 CGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPN 1347 (1553)
Q Consensus 1268 g~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~ 1347 (1553)
..|++||.|+++|+.++.. |...|..+.|+|+++||+++|.|..++++|+|+.+.+..++. |...+.++.| +|-..
T Consensus 244 nlVKlWDprSg~cl~tlh~--HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~-Hkkdv~~~~W-hP~~~ 319 (464)
T KOG0284|consen 244 NLVKLWDPRSGSCLATLHG--HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG-HKKDVTSLTW-HPLNE 319 (464)
T ss_pred ceeEeecCCCcchhhhhhh--ccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc-chhhheeecc-ccccc
Confidence 9999999999999999976 899999999999999999999999999999998888888775 6678999999 77653
Q ss_pred CccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCC
Q 000410 1348 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1427 (1553)
Q Consensus 1348 ~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 1427 (1553)
.++.+|+.||.|..|.+...+.+.. .
T Consensus 320 --------~lftsgg~Dgsvvh~~v~~~~p~~~----------------------------------------------i 345 (464)
T KOG0284|consen 320 --------SLFTSGGSDGSVVHWVVGLEEPLGE----------------------------------------------I 345 (464)
T ss_pred --------cceeeccCCCceEEEeccccccccC----------------------------------------------C
Confidence 4788899999999999862211100 1
Q ss_pred CCCCccCcEEeccCCCCeEE-EccCCCeEEEEeCCCCCC
Q 000410 1428 PPPRLLGIRSLLPLPGGDLL-TGGTDLKIRRWDHCSPGR 1465 (1553)
Q Consensus 1428 ~~~~~~~V~sl~~sp~g~ll-Tgg~Dg~IrlWDl~~~~~ 1465 (1553)
..+|...|++++|+|-|.|+ ||+.|+++|||.-..+..
T Consensus 346 ~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d 384 (464)
T KOG0284|consen 346 PPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPGD 384 (464)
T ss_pred CcccccceeeeeccccceeEeecCCCcceeeeccCCCCC
Confidence 24577799999999999655 999999999999876543
|
|
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=283.65 Aligned_cols=241 Identities=22% Similarity=0.343 Sum_probs=186.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC--CCC----eeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID--HPH----VWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~--hpn----Iv~~~~~~~~~ 97 (1553)
+|++.+.+|+|.||+|..|.+.+ ..||||++. ....|.+.-.-|+++|.++. -|+ ++++.++|+-.
T Consensus 90 Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik------~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 90 RYEIVDLLGEGTFGKVVECWDRETKEHVALKIIK------NVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ceehhhhhcCCcccceEEEeecCCCceehHHHHH------HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 78999999999999999999875 469999984 34566666677778888883 233 78889999999
Q ss_pred CEEEEEeccccCCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC---------------
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW--------------- 160 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~--------------- 160 (1553)
++.+||+|.++-+++|++..+.. ++...++.|++||++++++||+.+++|-||||||||+.+.
T Consensus 164 ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 164 GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcccee
Confidence 99999999999899999988754 7889999999999999999999999999999999998531
Q ss_pred -----CcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH
Q 000410 161 -----NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235 (1553)
Q Consensus 161 -----~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 235 (1553)
-.|+|+|||.|..... . ..+..-|..|+|||++.+ -..+..+||||+||||+||+
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e--~--------hs~iVsTRHYRAPEViLg----------LGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHE--H--------HSTIVSTRHYRAPEVILG----------LGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred ccCCCcceEEEecCCcceecc--C--------cceeeeccccCCchheec----------cCcCCccCceeeeeEEEEee
Confidence 2489999999874311 1 123345778999998873 45778999999999999999
Q ss_pred cCCCCCCchH----HHHH---------------------HhcCCCCCC---------------CCC------CCCCHHHH
Q 000410 236 LEVPFFELSH----LLAY---------------------RRGQYDPSQ---------------HLE------KIPDSGIR 269 (1553)
Q Consensus 236 tg~~pf~~~~----~~~~---------------------~~~~~~~~~---------------~~~------~~~~~~l~ 269 (1553)
+|...|...+ +..+ .++..+... .+. .....++.
T Consensus 304 tG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred ccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 9988884221 1110 011111000 000 00123688
Q ss_pred HHHHHhcccCcCCCCCHHHHHHh
Q 000410 270 KMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+||++||..||.+|+|+.|+|.|
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHccCccccccHHHHhcC
Confidence 99999999999999999999998
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=247.02 Aligned_cols=275 Identities=16% Similarity=0.247 Sum_probs=218.6
Q ss_pred CCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCcccccc
Q 000410 1151 HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYS 1230 (1553)
Q Consensus 1151 ~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~ 1230 (1553)
.-+|||+|.|.|||+|.+.++. +..+.....+.|..+...|+++.||+|+. ..|++||+++.+.
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~------C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np--------- 73 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGI------CSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNP--------- 73 (311)
T ss_pred ceEEEeccCcceeeeeehhcCe------EEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCC---------
Confidence 3589999999999999999886 55566666778999999999999998885 6799999985221
Q ss_pred ccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeC
Q 000410 1231 GISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSS 1310 (1553)
Q Consensus 1231 ~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~ 1310 (1553)
..+..+. .+..-|..+.|.-+ |+.+++|+.||++++||+|...+.+.++ +..+|++++.+|++.-|++|..
T Consensus 74 --~Pv~t~e-~h~kNVtaVgF~~d---grWMyTgseDgt~kIWdlR~~~~qR~~~---~~spVn~vvlhpnQteLis~dq 144 (311)
T KOG0315|consen 74 --NPVATFE-GHTKNVTAVGFQCD---GRWMYTGSEDGTVKIWDLRSLSCQRNYQ---HNSPVNTVVLHPNQTELISGDQ 144 (311)
T ss_pred --CceeEEe-ccCCceEEEEEeec---CeEEEecCCCceEEEEeccCcccchhcc---CCCCcceEEecCCcceEEeecC
Confidence 1222222 34445778889998 8899999999999999999988877776 4689999999999999999999
Q ss_pred CCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCC
Q 000410 1311 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1390 (1553)
Q Consensus 1311 dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~ 1390 (1553)
+|.|++||++...+...+-.....+|.++.. .|+ |.+++.+...|...+|++-+.+....+.
T Consensus 145 sg~irvWDl~~~~c~~~liPe~~~~i~sl~v-~~d---------gsml~a~nnkG~cyvW~l~~~~~~s~l~-------- 206 (311)
T KOG0315|consen 145 SGNIRVWDLGENSCTHELIPEDDTSIQSLTV-MPD---------GSMLAAANNKGNCYVWRLLNHQTASELE-------- 206 (311)
T ss_pred CCcEEEEEccCCccccccCCCCCcceeeEEE-cCC---------CcEEEEecCCccEEEEEccCCCccccce--------
Confidence 9999999999887777666656667888877 554 5588888889999999997643211111
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCC-CCceE
Q 000410 1391 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSP-GRSYC 1468 (1553)
Q Consensus 1391 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~-~~s~~ 1468 (1553)
|+. ....|...+..+.++|++ .|+|+|+|.++++|++++. +...
T Consensus 207 -----------P~~----------------------k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~- 252 (311)
T KOG0315|consen 207 -----------PVH----------------------KFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLEL- 252 (311)
T ss_pred -----------Ehh----------------------heecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEE-
Confidence 111 123455678889999999 5779999999999998754 1111
Q ss_pred EeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCce
Q 000410 1469 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGA 1548 (1553)
Q Consensus 1469 ~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~ 1548 (1553)
.+.||+.++.|. +|+.+|++|+|||.|+.
T Consensus 253 --------------------------------------------------~l~gh~rWvWdc-~FS~dg~YlvTassd~~ 281 (311)
T KOG0315|consen 253 --------------------------------------------------VLTGHQRWVWDC-AFSADGEYLVTASSDHT 281 (311)
T ss_pred --------------------------------------------------EeecCCceEEee-eeccCccEEEecCCCCc
Confidence 123599999999 79999999999999999
Q ss_pred EEEcC
Q 000410 1549 IKVWK 1553 (1553)
Q Consensus 1549 IkVWk 1553 (1553)
+++|+
T Consensus 282 ~rlW~ 286 (311)
T KOG0315|consen 282 ARLWD 286 (311)
T ss_pred eeecc
Confidence 99996
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=278.97 Aligned_cols=294 Identities=17% Similarity=0.239 Sum_probs=235.4
Q ss_pred ccEeeeccccccCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeC
Q 000410 1129 GILVAHLQEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~sp-d~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~ 1207 (1553)
-+++.+++||+..|+++.|.| .+.+|+|||.|+.|+||++-... ++..+|.+|..+|.+++|+..|..|.++|.
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~-----~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf 278 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR-----RCLRTFKGHRKPVRDASFNNCGTSFLSASF 278 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCc-----ceehhhhcchhhhhhhhccccCCeeeeeec
Confidence 357899999999999999999 88999999999999999997632 367799999999999999999999999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|+.|++||+++.. .......+..+.|+.|+|++ .+.+++|+.|+.|+.||+|+++.+..+..
T Consensus 279 D~~lKlwDtETG~---------------~~~~f~~~~~~~cvkf~pd~--~n~fl~G~sd~ki~~wDiRs~kvvqeYd~- 340 (503)
T KOG0282|consen 279 DRFLKLWDTETGQ---------------VLSRFHLDKVPTCVKFHPDN--QNIFLVGGSDKKIRQWDIRSGKVVQEYDR- 340 (503)
T ss_pred ceeeeeeccccce---------------EEEEEecCCCceeeecCCCC--CcEEEEecCCCcEEEEeccchHHHHHHHh-
Confidence 9999999998521 11122346678899999995 46999999999999999999999988866
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
|.+.|.++.|-++|+.+++.+.|+.+++|+.+...+++-...++.....++.. +| +++++++=+.|+.|
T Consensus 341 -hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~-~P---------~~~~~~aQs~dN~i 409 (503)
T KOG0282|consen 341 -HLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTL-HP---------NGKWFAAQSMDNYI 409 (503)
T ss_pred -hhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceec-CC---------CCCeehhhccCceE
Confidence 89999999999999999999999999999999988887766554444444444 44 45688888889999
Q ss_pred EEEEcCCCc---EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC
Q 000410 1368 SLWNAENGS---CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1444 (1553)
Q Consensus 1368 ~vWDl~tg~---~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g 1444 (1553)
.++.+.-.- ..+.|.++.. .+.-..+.|+|||
T Consensus 410 ~ifs~~~~~r~nkkK~feGh~v---------------------------------------------aGys~~v~fSpDG 444 (503)
T KOG0282|consen 410 AIFSTVPPFRLNKKKRFEGHSV---------------------------------------------AGYSCQVDFSPDG 444 (503)
T ss_pred EEEecccccccCHhhhhcceec---------------------------------------------cCceeeEEEcCCC
Confidence 888854211 1111111110 1134567899999
Q ss_pred -eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCC
Q 000410 1445 -DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1523 (1553)
Q Consensus 1445 -~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1523 (1553)
+|++|.+||++.+||.++.+... .+.+|
T Consensus 445 ~~l~SGdsdG~v~~wdwkt~kl~~---------------------------------------------------~lkah 473 (503)
T KOG0282|consen 445 RTLCSGDSDGKVNFWDWKTTKLVS---------------------------------------------------KLKAH 473 (503)
T ss_pred CeEEeecCCccEEEeechhhhhhh---------------------------------------------------ccccC
Confidence 67799999999999987543322 23348
Q ss_pred ccceeEEeeeecC-CcEEEEEcCCceEEEcC
Q 000410 1524 RDSILSLGSVKLN-QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1524 ~d~I~~va~~~~~-~~~LvSas~DG~IkVWk 1553 (1553)
...+..+ .|+|. ..-+||||.||.||+|+
T Consensus 474 ~~~ci~v-~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 474 DQPCIGV-DWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CcceEEE-EecCCCcceeEecccCceeEecC
Confidence 8888888 78887 55799999999999996
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-27 Score=269.40 Aligned_cols=287 Identities=25% Similarity=0.401 Sum_probs=231.0
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I 1211 (1553)
+.++.+|.++|++++|+|+++++++|+.||.|++||..+.+ .......|...+.++.|+++++.+++++.||.|
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 75 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE------LLRTLKGHTGPVRDVAASADGTYLASGSSDKTI 75 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC------cEEEEecCCcceeEEEECCCCCEEEEEcCCCeE
Confidence 46788999999999999999999999999999999998654 334566777888999999999999999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCc
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
++|++.... ..... ..+...+.++.|+++ +.++++++.+|.|.+||+++++....+.. |.+
T Consensus 76 ~i~~~~~~~-------------~~~~~-~~~~~~i~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~ 136 (289)
T cd00200 76 RLWDLETGE-------------CVRTL-TGHTSYVSSVAFSPD---GRILSSSSRDKTIKVWDVETGKCLTTLRG--HTD 136 (289)
T ss_pred EEEEcCccc-------------ceEEE-eccCCcEEEEEEcCC---CCEEEEecCCCeEEEEECCCcEEEEEecc--CCC
Confidence 999997310 11111 234557888899997 56888888899999999998888777764 778
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000410 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1371 (1553)
Q Consensus 1292 ~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWD 1371 (1553)
.|++++|+|++.++++|+.+|.+.+||++.+..+..+.. +...+..+.+ .|. +..+++++.++.|.+||
T Consensus 137 ~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~-~~~---------~~~l~~~~~~~~i~i~d 205 (289)
T cd00200 137 WVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG-HTGEVNSVAF-SPD---------GEKLLSSSSDGTIKLWD 205 (289)
T ss_pred cEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEec-CccccceEEE-CCC---------cCEEEEecCCCcEEEEE
Confidence 899999999999999988899999999998888877764 5557888887 553 45788888899999999
Q ss_pred cCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEE-Ecc
Q 000410 1372 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGG 1450 (1553)
Q Consensus 1372 l~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~ll-Tgg 1450 (1553)
+.+++....+. .+...+.++.|+|++.++ +++
T Consensus 206 ~~~~~~~~~~~-----------------------------------------------~~~~~i~~~~~~~~~~~~~~~~ 238 (289)
T cd00200 206 LSTGKCLGTLR-----------------------------------------------GHENGVNSVAFSPDGYLLASGS 238 (289)
T ss_pred CCCCceecchh-----------------------------------------------hcCCceEEEEEcCCCcEEEEEc
Confidence 98876544432 112268899999988555 555
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEE
Q 000410 1451 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1530 (1553)
Q Consensus 1451 ~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1530 (1553)
.|+.|++||+.+.+....+. .|...|.++
T Consensus 239 ~~~~i~i~~~~~~~~~~~~~---------------------------------------------------~~~~~i~~~ 267 (289)
T cd00200 239 EDGTIRVWDLRTGECVQTLS---------------------------------------------------GHTNSVTSL 267 (289)
T ss_pred CCCcEEEEEcCCceeEEEcc---------------------------------------------------ccCCcEEEE
Confidence 59999999987543222111 277889999
Q ss_pred eeeecCCcEEEEEcCCceEEEcC
Q 000410 1531 GSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1531 a~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|++++.+|++++.||.|+||+
T Consensus 268 -~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 268 -AWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred -EECCCCCEEEEecCCCeEEecC
Confidence 7999999999999999999997
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-27 Score=245.69 Aligned_cols=269 Identities=19% Similarity=0.264 Sum_probs=216.1
Q ss_pred CCCcc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1122 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1122 ~~~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
-+.|. ..|++..+++...+.|+++...||+++||+|+. -.||++|+++...+ +..+|.+|...|+++.|..+|+
T Consensus 22 IRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~----Pv~t~e~h~kNVtaVgF~~dgr 96 (311)
T KOG0315|consen 22 IRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPN----PVATFEGHTKNVTAVGFQCDGR 96 (311)
T ss_pred eeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCC----ceeEEeccCCceEEEEEeecCe
Confidence 45798 669999999988899999999999999999887 56999999987632 6779999998999999999999
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++||.||+++|||++.. ...| ..++.++|+++..+|+ +..|++|+++|.|++||++...+
T Consensus 97 WMyTgseDgt~kIWdlR~~-------------~~qR--~~~~~spVn~vvlhpn---QteLis~dqsg~irvWDl~~~~c 158 (311)
T KOG0315|consen 97 WMYTGSEDGTVKIWDLRSL-------------SCQR--NYQHNSPVNTVVLHPN---QTELISGDQSGNIRVWDLGENSC 158 (311)
T ss_pred EEEecCCCceEEEEeccCc-------------ccch--hccCCCCcceEEecCC---cceEEeecCCCcEEEEEccCCcc
Confidence 9999999999999999831 1222 2245588999999999 66999999999999999999877
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------ccceeeccccCCcceEEeecCCCCCccccCC
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV------PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTA 1354 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~------~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~ 1354 (1553)
...+-- ...-.|+++.+.|||.+|+.+...|.+.+|++-... ++..++. |.+-|.++.+ +++
T Consensus 159 ~~~liP-e~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~a-h~~~il~C~l----------SPd 226 (311)
T KOG0315|consen 159 THELIP-EDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQA-HNGHILRCLL----------SPD 226 (311)
T ss_pred ccccCC-CCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheec-ccceEEEEEE----------CCC
Confidence 765542 244679999999999999999999999999987543 2333332 3444555444 456
Q ss_pred CCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccC
Q 000410 1355 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1434 (1553)
Q Consensus 1355 ~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1434 (1553)
+++++++|.|.+++||+.++. ..-.+. ..+|...
T Consensus 227 ~k~lat~ssdktv~iwn~~~~-~kle~~---------------------------------------------l~gh~rW 260 (311)
T KOG0315|consen 227 VKYLATCSSDKTVKIWNTDDF-FKLELV---------------------------------------------LTGHQRW 260 (311)
T ss_pred CcEEEeecCCceEEEEecCCc-eeeEEE---------------------------------------------eecCCce
Confidence 679999999999999999976 111111 0234458
Q ss_pred cEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeC
Q 000410 1435 IRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICG 1471 (1553)
Q Consensus 1435 V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g 1471 (1553)
|+.++|+.+| +|+||++|+.+|+||+..++..+...|
T Consensus 261 vWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g 298 (311)
T KOG0315|consen 261 VWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG 298 (311)
T ss_pred EEeeeeccCccEEEecCCCCceeecccccCceeeecCC
Confidence 9999999999 788999999999999998877665554
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=272.76 Aligned_cols=243 Identities=22% Similarity=0.328 Sum_probs=189.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|.-++.+|.|.- .|..|-+. +..||+|....+ .......++-.+|...+..++|+||++++.+|.-.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p---f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP---FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCc---cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 7888899999988 66666553 577999988766 22244455667777899999999999999998543
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+||||+..+|...+..+ +.-..+..|++|+++|++|||+.||+||||||+||++..++.+||.|||++...
T Consensus 94 ~e~y~v~e~m~~nl~~vi~~e--lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e--- 168 (369)
T KOG0665|consen 94 QEVYLVMELMDANLCQVILME--LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE--- 168 (369)
T ss_pred HhHHHHHHhhhhHHHHHHHHh--cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc---
Confidence 358999999999999988743 788999999999999999999999999999999999999999999999998743
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH---------
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--------- 248 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~--------- 248 (1553)
+..+.......+..|.|||++. +..+.+.+||||+||++.||++|+..|.+.+...
T Consensus 169 -----~~~~~mtpyVvtRyyrapevil----------~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~l 233 (369)
T KOG0665|consen 169 -----DTDFMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQL 233 (369)
T ss_pred -----CcccccCchhheeeccCchhee----------ccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHh
Confidence 1223344556688899999875 3348889999999999999999998886432110
Q ss_pred -----------------HHh--cC---CC-----CCC------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -----------------YRR--GQ---YD-----PSQ------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -----------------~~~--~~---~~-----~~~------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
|.. .+ +. +.. ..++.....+++++.+||..||++|.+++++|+|
T Consensus 234 gtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 234 GTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred cCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000 00 11 111 1112334578999999999999999999999999
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=285.77 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=189.4
Q ss_pred EEEEeeccCcEEEEEEEECC---c---eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 29 LKEVLGGSRFFKSILCKHDE---G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 29 ~~~~LG~G~fg~V~~a~~~~---~---~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+.+.||.|-||.||+|.+.+ + .||||.-+..... +. .+.|..|..+|+.++||||+++++++.+ ...||
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~---d~-tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP---DD-TEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh---hh-HHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 34579999999999998743 2 2888988664322 22 5567788899999999999999999875 46899
Q ss_pred Eecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||+++ |.|..++..+. .|+......+++||..||.|||+.++|||||-..||||.+...|||+|||+++...
T Consensus 468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e----- 542 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE----- 542 (974)
T ss_pred EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc-----
Confidence 999999 99999998764 58999999999999999999999999999999999999999999999999998652
Q ss_pred CCCcceeeecC-CCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH----HHHHHhcCC
Q 000410 181 PSDFSFFFDTG-GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~-~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~~~~~~~ 254 (1553)
+..++..+. .-..-|||||-+. -..++.++|||-||+++||++. |..||.+-. +..+.+|..
T Consensus 543 --d~~yYkaS~~kLPIKWmaPESIN----------fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR 610 (974)
T KOG4257|consen 543 --DDAYYKASRGKLPIKWMAPESIN----------FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER 610 (974)
T ss_pred --ccchhhccccccceeecCccccc----------hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC
Confidence 223333222 2234599999553 4578999999999999999986 666774321 122233332
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. ..+...++.+..|+.+||..||.+||++.++...+
T Consensus 611 l---P~P~nCPp~LYslmskcWayeP~kRPrftei~~~l 646 (974)
T KOG4257|consen 611 L---PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAIL 646 (974)
T ss_pred C---CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHH
Confidence 2 34555667899999999999999999999887654
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-29 Score=295.94 Aligned_cols=199 Identities=24% Similarity=0.274 Sum_probs=166.0
Q ss_pred CccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC--
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK-- 98 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~-- 98 (1553)
..|-|...+.||+|+||.||+++++. +.||||.+.+..... -.+...+|+++|++++|||||+++++-++..
T Consensus 11 ~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r----~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~ 86 (732)
T KOG4250|consen 11 ENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLR----PRERWCREIEILKKLNHPNIVKLFDIEETKFLG 86 (732)
T ss_pred CCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccc----hHHHHHHHHHHHHHcCchhhhhhcccCCccccC
Confidence 44678888999999999999999864 669999997753222 2345667789999999999999999876544
Q ss_pred ----EEEEEecccc-CCHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec--CC--cEEEe
Q 000410 99 ----AAYLLRQYFF-NSLRDRLSTPP---FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS--WN--WLYLS 166 (1553)
Q Consensus 99 ----~~~lV~E~~~-gsL~d~l~~~~---~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~--~~--~vkL~ 166 (1553)
...+|||||. |+|+.++.+.. .|++.+.+.++..+..||.|||++||+||||||.||++-. +| ..||+
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeee
Confidence 4689999999 69999997642 4999999999999999999999999999999999999853 34 47999
Q ss_pred ecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC
Q 000410 167 DFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 242 (1553)
Q Consensus 167 DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~ 242 (1553)
|||.|+.... ...+.+..||..|++||++.. .+.|+..+|.||+||++|++.||..||.
T Consensus 167 DfG~Arel~d--------~s~~~S~vGT~~YLhPel~E~---------q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 167 DFGAARELDD--------NSLFTSLVGTEEYLHPELYER---------QKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cccccccCCC--------CCeeeeecCchhhcChHHHhh---------ccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 9999997621 125677789999999998742 3578999999999999999999988884
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=264.90 Aligned_cols=292 Identities=19% Similarity=0.240 Sum_probs=228.7
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
..|++|++.|.-+.||++|+++||||.|.|+-||++..... ++-..+..+|..+|.-+.|+|+.+++++|+.|..+.
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~---~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~ 294 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH---FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS 294 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc---eeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence 46899999999999999999999999999999999875442 445668889999999999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcc
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1292 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1292 (1553)
+||+++.. ....+...++..+.+++|.|+ +..+++|+.|++|..||+.. .....-++ .....
T Consensus 295 lwDv~tgd-------------~~~~y~~~~~~S~~sc~W~pD---g~~~V~Gs~dr~i~~wdlDg-n~~~~W~g-vr~~~ 356 (519)
T KOG0293|consen 295 LWDVDTGD-------------LRHLYPSGLGFSVSSCAWCPD---GFRFVTGSPDRTIIMWDLDG-NILGNWEG-VRDPK 356 (519)
T ss_pred eccCCcch-------------hhhhcccCcCCCcceeEEccC---CceeEecCCCCcEEEecCCc-chhhcccc-cccce
Confidence 99998522 122233335677888899999 66899999999999999974 33322222 12356
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000410 1293 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1372 (1553)
Q Consensus 1293 Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl 1372 (1553)
|.++++.+||.++++-+.|..+++++........... ...+|++++. + .+++++++--.+.++.+||+
T Consensus 357 v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis--e~~~its~~i-S---------~d~k~~LvnL~~qei~LWDl 424 (519)
T KOG0293|consen 357 VHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS--EEQPITSFSI-S---------KDGKLALVNLQDQEIHLWDL 424 (519)
T ss_pred eEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc--ccCceeEEEE-c---------CCCcEEEEEcccCeeEEeec
Confidence 9999999999999999999999999998777665433 3457888887 3 35678888889999999999
Q ss_pred CCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC-CCCeEEEccC
Q 000410 1373 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL-PGGDLLTGGT 1451 (1553)
Q Consensus 1373 ~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s-p~g~llTgg~ 1451 (1553)
+.....+.+.++.. ++ --|+++.-- .+.++++|+.
T Consensus 425 ~e~~lv~kY~Ghkq-------------------------------------------~~-fiIrSCFgg~~~~fiaSGSE 460 (519)
T KOG0293|consen 425 EENKLVRKYFGHKQ-------------------------------------------GH-FIIRSCFGGGNDKFIASGSE 460 (519)
T ss_pred chhhHHHHhhcccc-------------------------------------------cc-eEEEeccCCCCcceEEecCC
Confidence 85544333332211 00 024443322 2347889999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEe
Q 000410 1452 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLG 1531 (1553)
Q Consensus 1452 Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va 1531 (1553)
|++|++|+..+++...+++| |...|++|
T Consensus 461 D~kvyIWhr~sgkll~~LsG---------------------------------------------------Hs~~vNcV- 488 (519)
T KOG0293|consen 461 DSKVYIWHRISGKLLAVLSG---------------------------------------------------HSKTVNCV- 488 (519)
T ss_pred CceEEEEEccCCceeEeecC---------------------------------------------------CcceeeEE-
Confidence 99999999988877666654 99999999
Q ss_pred eeecC-CcEEEEEcCCceEEEcC
Q 000410 1532 SVKLN-QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1532 ~~~~~-~~~LvSas~DG~IkVWk 1553 (1553)
+|+|. -.|+||||+||+|+||+
T Consensus 489 swNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 489 SWNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred ecCCCCHHHhhccCCCCeEEEec
Confidence 69886 67999999999999995
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-27 Score=250.48 Aligned_cols=290 Identities=16% Similarity=0.241 Sum_probs=230.9
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I 1211 (1553)
+..+.+|++.|+.+.|+|+|.+||||+.|..|-+|++..-.++ ..+.++|++.|+.+.|..+++.+++||.|.+|
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-----~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-----FWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-----eeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 4567899999999999999999999999999999997754432 23556999999999999999999999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCc
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
+.||+++.. .+++. ..|...|+.+. |..-...++.+++.|+++++||+|+..+++++++ .-
T Consensus 115 ~~wD~~tG~-------------~~rk~-k~h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~---ky 175 (338)
T KOG0265|consen 115 RGWDAETGK-------------RIRKH-KGHTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN---KY 175 (338)
T ss_pred EEEecccce-------------eeehh-ccccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhcccc---ce
Confidence 999998522 12222 24566777765 3322245889999999999999999999998875 55
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000410 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1371 (1553)
Q Consensus 1292 ~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWD 1371 (1553)
.+++++|...+..+.+|+-|+.|++||+|....+..... |..+|+.+.. ++. |..+.+-+-|..+++||
T Consensus 176 qltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsG-h~DtIt~lsl-s~~---------gs~llsnsMd~tvrvwd 244 (338)
T KOG0265|consen 176 QLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSG-HADTITGLSL-SRY---------GSFLLSNSMDNTVRVWD 244 (338)
T ss_pred eEEEEEecccccceeeccccCceeeeccccCcceEEeec-ccCceeeEEe-ccC---------CCccccccccceEEEEE
Confidence 799999999999999999999999999999888887775 6778988877 554 45788888999999999
Q ss_pred cCC----CcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEE
Q 000410 1372 AEN----GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL 1447 (1553)
Q Consensus 1372 l~t----g~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~ll 1447 (1553)
++- ..|+.++.++.-.- ......+.|+|++..+
T Consensus 245 ~rp~~p~~R~v~if~g~~hnf-------------------------------------------eknlL~cswsp~~~~i 281 (338)
T KOG0265|consen 245 VRPFAPSQRCVKIFQGHIHNF-------------------------------------------EKNLLKCSWSPNGTKI 281 (338)
T ss_pred ecccCCCCceEEEeecchhhh-------------------------------------------hhhcceeeccCCCCcc
Confidence 973 34566665332100 0023466889998544
Q ss_pred -EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccc
Q 000410 1448 -TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1526 (1553)
Q Consensus 1448 -Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1526 (1553)
+|+.|+.+++||.......+.+ .||.+.
T Consensus 282 ~ags~dr~vyvwd~~~r~~lykl---------------------------------------------------pGh~gs 310 (338)
T KOG0265|consen 282 TAGSADRFVYVWDTTSRRILYKL---------------------------------------------------PGHYGS 310 (338)
T ss_pred ccccccceEEEeecccccEEEEc---------------------------------------------------CCccee
Confidence 7888999999997654333322 349999
Q ss_pred eeEEeeeecCCcEEEEEcCCceEEE
Q 000410 1527 ILSLGSVKLNQRLLISSSRDGAIKV 1551 (1553)
Q Consensus 1527 I~~va~~~~~~~~LvSas~DG~IkV 1551 (1553)
|+++ .|+|...+|.|++.|.+|.+
T Consensus 311 vn~~-~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 311 VNEV-DFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred EEEe-eecCCCcEEEEeccCceeEe
Confidence 9999 79999999999999999875
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=289.26 Aligned_cols=250 Identities=18% Similarity=0.157 Sum_probs=201.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--c---eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~---~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
.++++.+.||+|.||.|++|.++. + .||||.+.... .......|.+|+.+|.+|+|||++++|++..+ ..
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~----l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp 184 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDS----LNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QP 184 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCc----cchhHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence 367888999999999999999864 2 39999985432 22255678899999999999999999999887 67
Q ss_pred EEEEecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 100 AYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
..||||+++ |+|.++|.+ ++.|-......++.||+.|+.||.++++|||||-..|+|+-+...|||+|||+.+....
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 899999999 899999976 45588899999999999999999999999999999999999999999999999987744
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHHHHHhcCCC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYD 255 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~~~~~~~~~ 255 (1553)
.++ ...+.....-...|+|||.+. ...++.++|+|++||+|||||++ +.||.+..-..+.+..-.
T Consensus 265 ned----~Yvm~p~rkvPfAWCaPEsLr----------h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~ 330 (1039)
T KOG0199|consen 265 NED----MYVMAPQRKVPFAWCAPESLR----------HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA 330 (1039)
T ss_pred CCc----ceEecCCCcCcccccCHhHhc----------cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc
Confidence 332 112222223345699999664 56789999999999999999996 889976554443332222
Q ss_pred -CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 256 -PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 256 -~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
..-.-++..++++.+++..||..+|++||++..+.+++
T Consensus 331 ~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 331 GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 11223556678999999999999999999999997653
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-27 Score=289.45 Aligned_cols=300 Identities=21% Similarity=0.323 Sum_probs=240.3
Q ss_pred ccCccEeeecccc-ccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEE
Q 000410 1126 RPRGILVAHLQEH-CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV 1204 (1553)
Q Consensus 1126 ~p~G~lv~~l~~H-~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las 1204 (1553)
.+...+...+..| ..+|+++.|+++|+++++++.|+++++|+...... .......+|...|.+++|+|+++.+++
T Consensus 145 ~~~~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~----~~~~~l~~h~~~v~~~~fs~d~~~l~s 220 (456)
T KOG0266|consen 145 SRVFSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS----NLLRELSGHTRGVSDVAFSPDGSYLLS 220 (456)
T ss_pred cccceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc----hhhccccccccceeeeEECCCCcEEEE
Confidence 3333457777666 78999999999999999999999999999965542 122334678888999999999999999
Q ss_pred EeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccccee
Q 000410 1205 GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1205 ~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
|+.|++|+|||+.... .......+|...|.+++|+|. ++++++|+.|++|++||++++++...+
T Consensus 221 ~s~D~tiriwd~~~~~-------------~~~~~l~gH~~~v~~~~f~p~---g~~i~Sgs~D~tvriWd~~~~~~~~~l 284 (456)
T KOG0266|consen 221 GSDDKTLRIWDLKDDG-------------RNLKTLKGHSTYVTSVAFSPD---GNLLVSGSDDGTVRIWDVRTGECVRKL 284 (456)
T ss_pred ecCCceEEEeeccCCC-------------eEEEEecCCCCceEEEEecCC---CCEEEEecCCCcEEEEeccCCeEEEee
Confidence 9999999999994210 122333478888899999999 679999999999999999999999999
Q ss_pred ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--ccceeeccccC-CcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV--PVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1285 ~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~--~l~s~~~~~~~-~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
.. |.+.|++++|++++++|++++.||.|++||+..+. ++..+...... ++..+++ +| ++.+++++
T Consensus 285 ~~--hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~f-sp---------~~~~ll~~ 352 (456)
T KOG0266|consen 285 KG--HSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQF-SP---------NGKYLLSA 352 (456)
T ss_pred ec--cCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEE-CC---------CCcEEEEe
Confidence 87 99999999999999999999999999999999988 55555554433 5777776 55 45699999
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.|+.+++||+.++.+...+..+... ...+.+...+
T Consensus 353 ~~d~~~~~w~l~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~ 388 (456)
T KOG0266|consen 353 SLDRTLKLWDLRSGKSVGTYTGHSNL--------------------------------------------VRCIFSPTLS 388 (456)
T ss_pred cCCCeEEEEEccCCcceeeecccCCc--------------------------------------------ceeEeccccc
Confidence 99999999999999998888754331 0022233335
Q ss_pred CCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCcc
Q 000410 1442 PGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSA 1520 (1553)
Q Consensus 1442 p~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1520 (1553)
+++ .+++|+.|+.|.+||+.+......+
T Consensus 389 ~~~~~i~sg~~d~~v~~~~~~s~~~~~~l--------------------------------------------------- 417 (456)
T KOG0266|consen 389 TGGKLIYSGSEDGSVYVWDSSSGGILQRL--------------------------------------------------- 417 (456)
T ss_pred CCCCeEEEEeCCceEEEEeCCccchhhhh---------------------------------------------------
Confidence 566 6779999999999999864433322
Q ss_pred CCC-ccceeEEeeeecCCcEEEEEc--CCceEEEcC
Q 000410 1521 GCH-RDSILSLGSVKLNQRLLISSS--RDGAIKVWK 1553 (1553)
Q Consensus 1521 ~~H-~d~I~~va~~~~~~~~LvSas--~DG~IkVWk 1553 (1553)
.+| ...|.++ .+++...++++++ .|+.|++|+
T Consensus 418 ~~h~~~~~~~~-~~~~~~~~~~s~s~~~d~~~~~w~ 452 (456)
T KOG0266|consen 418 EGHSKAAVSDL-SSHPTENLIASSSFEGDGLIRLWK 452 (456)
T ss_pred cCCCCCceecc-ccCCCcCeeeecCcCCCceEEEec
Confidence 237 7788888 6899999999999 899999996
|
|
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=267.03 Aligned_cols=242 Identities=19% Similarity=0.250 Sum_probs=191.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|.+++.||+|+|++|.++++.. +.+|+|+++|.--. ..+-..-++.|..+..+. +||.++.++.+|+++..+++
T Consensus 251 df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n--ddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 251 DFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN--DDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cceeeeeecCcchhhhhheehcccceeeehhhHHHHhcC--CcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 78999999999999999999865 66999999876111 011111233444444444 69999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|.||++ |+|--.+....+|+++.++.+...|..||.|||++||+.||||.+|+|++..|++||+|+|+++....|.+.
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~- 407 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT- 407 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc-
Confidence 999999 598888887778999999999999999999999999999999999999999999999999999976554443
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc-------hHHHHHH-hcC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL-------SHLLAYR-RGQ 253 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~-------~~~~~~~-~~~ 253 (1553)
..+.+|||.|+|||++. +..|+..+|.|+||++++||+.|+.||+- .+...|. +..
T Consensus 408 ------tstfcgtpnyiapeilr----------geeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi 471 (593)
T KOG0695|consen 408 ------TSTFCGTPNYIAPEILR----------GEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI 471 (593)
T ss_pred ------cccccCCCcccchhhhc----------ccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH
Confidence 35678999999999765 55789999999999999999999999962 1112221 111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 286 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa 286 (1553)
......++...+-....+++..|.+||.+|...
T Consensus 472 lekqiriprslsvkas~vlkgflnkdp~erlgc 504 (593)
T KOG0695|consen 472 LEKQIRIPRSLSVKASHVLKGFLNKDPKERLGC 504 (593)
T ss_pred hhhcccccceeehhhHHHHHHhhcCCcHHhcCC
Confidence 111122344445567789999999999999854
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-29 Score=267.63 Aligned_cols=247 Identities=16% Similarity=0.104 Sum_probs=186.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHH-HHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRE-TFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~-~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+.+-+..||.|.||.|++..|+. ...|||.+..... +...+++..|.+ +++.-+.||||+||+....++..||
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~----~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWi 140 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI----EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWI 140 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc----hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceee
Confidence 34455689999999999999974 6699999865522 334445555555 4555579999999999989999999
Q ss_pred EeccccCCH---HHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 103 LRQYFFNSL---RDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 103 V~E~~~gsL---~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
.||+|.-+| |.++. ++..++|.-+-.|+.-.+.||.||-. .+|+||||||+|||++..|.+||||||.+.....
T Consensus 141 CMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 141 CMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred eHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 999999654 44442 33458999999999999999999986 6899999999999999999999999998765422
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc--hHHHHHHhcCC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL--SHLLAYRRGQY 254 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~--~~~~~~~~~~~ 254 (1553)
.. ....-.|-..|||||++.. ....|+-++|+||||++|||+.||..||.. +.+.++.+...
T Consensus 221 Si--------AkT~daGCrpYmAPERi~p--------~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~ 284 (361)
T KOG1006|consen 221 SI--------AKTVDAGCRPYMAPERIDP--------SDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI 284 (361)
T ss_pred HH--------HhhhccCCccccChhccCC--------ccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc
Confidence 11 1122234566999999852 233588999999999999999999999863 22333333222
Q ss_pred CCCC--CCCC---CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQ--HLEK---IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~--~~~~---~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+ ..+. ..+..+..+|..||.+|-..||...+++++
T Consensus 285 gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 285 GDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2111 1111 246789999999999999999999999875
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=293.54 Aligned_cols=258 Identities=16% Similarity=0.198 Sum_probs=208.5
Q ss_pred cccccCCCccceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEE
Q 000410 16 YYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAF 90 (1553)
Q Consensus 16 ~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~ 90 (1553)
.+..++... ..++.++||.|.||.|++|+.+- ..||||.++.. ..+.....|..|+.||-+++||||+++
T Consensus 621 eFakEId~s-~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G----ytekqrrdFL~EAsIMGQFdHPNIIrL 695 (996)
T KOG0196|consen 621 EFAKEIDPS-CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG----YTEKQRRDFLSEASIMGQFDHPNIIRL 695 (996)
T ss_pred HhhhhcChh-heEEEEEEecccccceecccccCCCCcceeEEEeeeccC----ccHHHHhhhhhhhhhcccCCCCcEEEE
Confidence 344555444 47889999999999999998852 35999999654 345667789999999999999999999
Q ss_pred EEEEEeCCEEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 91 QFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 91 ~~~~~~~~~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
.++....+.++||+|||+ |+|..+|+++ +.++..+...+++.|+.|++||-+.|+|||||-..||||+++-..|++||
T Consensus 696 EGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 696 EGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred EEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccc
Confidence 999999999999999999 8999999765 56999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCC--CccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C-CCCCCch
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGK--RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E-VPFFELS 244 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g-~~pf~~~ 244 (1553)
|+++... +++ .....+.+| ...|.|||.+ ...++|.++|+||+|++|||.++ | +|.|+.+
T Consensus 776 GLSRvle---dd~---~~~ytt~GGKIPiRWTAPEAI----------a~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS 839 (996)
T KOG0196|consen 776 GLSRVLE---DDP---EAAYTTLGGKIPIRWTAPEAI----------AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 839 (996)
T ss_pred cceeecc---cCC---CccccccCCccceeecChhHh----------hhcccCchhhccccceEEEEecccCCCcccccc
Confidence 9998542 222 112233333 4569999965 35689999999999999999876 6 6777776
Q ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 245 HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+..-++..+.......+--.+..+.+|+..||++|-.+||.+.|++..|.
T Consensus 840 NQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 840 NQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred hHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 65554433322111123334578999999999999999999999998865
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-28 Score=304.71 Aligned_cols=252 Identities=17% Similarity=0.229 Sum_probs=166.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEE------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFW------ 93 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~------ 93 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|.+..... .+.. + .+ .++...+.++..+...
T Consensus 133 ~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~---~-~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIW---M-NE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred CeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHH---H-HH--HHHhhchhhHHHHHHhhhcccc
Confidence 89999999999999999999853 4699998754311 1111 1 11 1112222222222111
Q ss_pred EEeCCEEEEEecccc-CCHHHHhcCCCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000410 94 QETDKAAYLLRQYFF-NSLRDRLSTPPF--------------------LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 152 (1553)
Q Consensus 94 ~~~~~~~~lV~E~~~-gsL~d~l~~~~~--------------------l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp 152 (1553)
...+...++|+||++ ++|++++..+.. .....+..|+.||+.||.|||++||+||||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 245667999999999 699999875431 12334667999999999999999999999999
Q ss_pred CcEEEec-CCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCcccc------------ccCCCCC
Q 000410 153 ENVLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQV------------AQDAPLK 219 (1553)
Q Consensus 153 ~NILv~~-~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~------------~~~~~~t 219 (1553)
+|||++. ++.+||+|||+++...... .+......+++.|+|||.+......... .....++
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 9999996 5799999999997542211 1122344578899999977533221100 0112356
Q ss_pred CcccHHHHHHHHHHHHcCCCCCCchHHHH---HHhcCCC---------CC--C------CCCCCCCHHHHHHHHHhcccC
Q 000410 220 PSMDIFAVGCVIAELFLEVPFFELSHLLA---YRRGQYD---------PS--Q------HLEKIPDSGIRKMILHMIQLE 279 (1553)
Q Consensus 220 ~~~DIwSlG~il~eLltg~~pf~~~~~~~---~~~~~~~---------~~--~------~~~~~~~~~l~~LI~~mL~~d 279 (1553)
.++||||+||++|||+++..+++...... +....++ .. . ......+....+||.+||+.|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 78899999999999999766655332111 1111110 00 0 001112334569999999999
Q ss_pred cCCCCCHHHHHHh
Q 000410 280 PELRFSAESYLQN 292 (1553)
Q Consensus 280 P~~Rpsa~elL~~ 292 (1553)
|++|||++|+|+|
T Consensus 438 P~kR~ta~e~L~H 450 (566)
T PLN03225 438 GRQRISAKAALAH 450 (566)
T ss_pred cccCCCHHHHhCC
Confidence 9999999999998
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-28 Score=291.31 Aligned_cols=249 Identities=20% Similarity=0.180 Sum_probs=202.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEe-----C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQET-----D 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~-----~ 97 (1553)
.|++.+.||.|.+|+||++++. +..+|+|+.... .+..++++.|.++|+.+ .|||++.+|++|.. +
T Consensus 20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~------~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT------EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC------ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 5899999999999999999875 356999998543 22344566677888876 69999999998843 4
Q ss_pred CEEEEEecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
+.+|||||||. |+.-|+++. ...+.|+.+..|++.++.||.+||.+.++|||||-.|||++.++.|||+|||.+...
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 67999999999 698888864 356899999999999999999999999999999999999999999999999988755
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCC-CchHHHHHHhcC
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF-ELSHLLAYRRGQ 253 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf-~~~~~~~~~~~~ 253 (1553)
..... ...++.|||+|||||++.... .....|+..+|+||||++..||.-|.||+ +......+....
T Consensus 174 dsT~g-------rRnT~iGtP~WMAPEViac~e-----~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip 241 (953)
T KOG0587|consen 174 DSTVG-------RRNTFIGTPYWMAPEVIACDE-----SPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP 241 (953)
T ss_pred ecccc-------cccCcCCCcccccceeeeccc-----CCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC
Confidence 32221 235678999999999986432 33557888999999999999999997776 455555554444
Q ss_pred CCCCCCC--CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 YDPSQHL--EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~~~~~~--~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+|++.+ ++..++.+.++|..||.+|-++||+..++|+|
T Consensus 242 RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 242 RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 4444433 34556789999999999999999999999998
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-28 Score=279.26 Aligned_cols=244 Identities=16% Similarity=0.187 Sum_probs=199.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+++...+||.|.||.||.+.++.. .||||.++.. ....++|.+|+.+|+.++|||+|+++++|..+-.+|||
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED------tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi 341 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII 341 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc------chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence 678889999999999999999873 4999988432 23345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|||. |+|.|||+.. ..++......++.||..|++||..+++|||||-..|.||.++..||++|||+++...-.
T Consensus 342 TEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD--- 418 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD--- 418 (1157)
T ss_pred EecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC---
Confidence 99999 8999999764 34788888999999999999999999999999999999999999999999999865211
Q ss_pred CCCcceee-ecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC---chHHHHHHhcCCC
Q 000410 181 PSDFSFFF-DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE---LSHLLAYRRGQYD 255 (1553)
Q Consensus 181 ~~~~~~~~-~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~---~~~~~~~~~~~~~ 255 (1553)
++.. ....-..-|.|||-+. ...++.|+|||+||++|||+.| |-.||. .++...+....|.
T Consensus 419 ----TYTAHAGAKFPIKWTAPEsLA----------yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR 484 (1157)
T KOG4278|consen 419 ----TYTAHAGAKFPIKWTAPESLA----------YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR 484 (1157)
T ss_pred ----ceecccCccCcccccCccccc----------ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc
Confidence 1100 0111134599999653 4467889999999999999988 677885 4556666666665
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.. -+.-.++.+.+|++.||+++|.+||++.|+-+.|+
T Consensus 485 M~--~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 485 MD--GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred cc--CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 43 23445678999999999999999999999987754
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=258.37 Aligned_cols=284 Identities=18% Similarity=0.242 Sum_probs=235.3
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeec
Q 000410 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1219 (1553)
Q Consensus 1140 ~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~ 1219 (1553)
..||+++|+.+|.+||||+.||.++||+.... ...++..|.++|.++.|...|++|++++-||++.+||..+.
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~-------l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g 308 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDGN-------LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTG 308 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecCch-------hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCc
Confidence 57999999999999999999999999998753 23477889999999999999999999999999999999631
Q ss_pred ccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEc
Q 000410 1220 SRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTG 1299 (1553)
Q Consensus 1220 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~s 1299 (1553)
.......-+..+...+.|-.+ ..+++++.|+.|+++-+.....+.++.+ |++.|.++.|+
T Consensus 309 --------------~~~q~f~~~s~~~lDVdW~~~----~~F~ts~td~~i~V~kv~~~~P~~t~~G--H~g~V~alk~n 368 (524)
T KOG0273|consen 309 --------------TVKQQFEFHSAPALDVDWQSN----DEFATSSTDGCIHVCKVGEDRPVKTFIG--HHGEVNALKWN 368 (524)
T ss_pred --------------eEEEeeeeccCCccceEEecC----ceEeecCCCceEEEEEecCCCcceeeec--ccCceEEEEEC
Confidence 112222223333233455544 2899999999999999999999999987 99999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEE
Q 000410 1300 PCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQ 1379 (1553)
Q Consensus 1300 p~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~ 1379 (1553)
|.|..|+++|.||++++|.+....+...++. |...|..+.| +|.+........+-.+++++.|+.|++||++.|.|..
T Consensus 369 ~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~-Hskei~t~~w-sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~ 446 (524)
T KOG0273|consen 369 PTGSLLASCSDDGTLKIWSMGQSNSVHDLQA-HSKEIYTIKW-SPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIH 446 (524)
T ss_pred CCCceEEEecCCCeeEeeecCCCcchhhhhh-hccceeeEee-cCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeE
Confidence 9999999999999999999988888888776 6678999999 8877655555566789999999999999999999988
Q ss_pred EEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEE
Q 000410 1380 VLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRW 1458 (1553)
Q Consensus 1380 ~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlW 1458 (1553)
+|-. |...|.+++|+|+| ++++|+.||.|.+|
T Consensus 447 ~f~k-----------------------------------------------H~~pVysvafS~~g~ylAsGs~dg~V~iw 479 (524)
T KOG0273|consen 447 TLMK-----------------------------------------------HQEPVYSVAFSPNGRYLASGSLDGCVHIW 479 (524)
T ss_pred eecc-----------------------------------------------CCCceEEEEecCCCcEEEecCCCCeeEec
Confidence 8742 33379999999999 67799999999999
Q ss_pred eCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCc
Q 000410 1459 DHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQR 1538 (1553)
Q Consensus 1459 Dl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~ 1538 (1553)
+.+.++.-+... -.+.|..| +|+..|.
T Consensus 480 s~~~~~l~~s~~----------------------------------------------------~~~~Ifel-~Wn~~G~ 506 (524)
T KOG0273|consen 480 STKTGKLVKSYQ----------------------------------------------------GTGGIFEL-CWNAAGD 506 (524)
T ss_pred cccchheeEeec----------------------------------------------------CCCeEEEE-EEcCCCC
Confidence 998765544332 24568999 8999998
Q ss_pred EEEEEcCCceEEEc
Q 000410 1539 LLISSSRDGAIKVW 1552 (1553)
Q Consensus 1539 ~LvSas~DG~IkVW 1552 (1553)
.|..+-.||.|.|-
T Consensus 507 kl~~~~sd~~vcvl 520 (524)
T KOG0273|consen 507 KLGACASDGSVCVL 520 (524)
T ss_pred EEEEEecCCCceEE
Confidence 88888889988874
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=254.74 Aligned_cols=253 Identities=18% Similarity=0.328 Sum_probs=191.0
Q ss_pred ccccCCCccceEEEEEeeccCcEEEEEEEE--CCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEE
Q 000410 17 YLHDLPSSYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFW 93 (1553)
Q Consensus 17 ~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~--~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~ 93 (1553)
+..+-+..-+|++.+++|+|.++.||.|.. .+..++||+++. --++.+.+|+.+|..+. ||||++++++
T Consensus 30 ~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--------VkkkKIkREikIL~nL~gg~NIi~L~Di 101 (338)
T KOG0668|consen 30 LVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP--------VKKKKIKREIKILQNLRGGPNIIKLLDI 101 (338)
T ss_pred eeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech--------HHHHHHHHHHHHHHhccCCCCeeehhhh
Confidence 344445555899999999999999999985 457799999842 23467889999999996 9999999999
Q ss_pred EEeC--CEEEEEeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecC
Q 000410 94 QETD--KAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFA 169 (1553)
Q Consensus 94 ~~~~--~~~~lV~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG 169 (1553)
..+. +..-||+||+.. +..... +.|+.-+++.+++||+.||.|||++||.|||+||.|+||+... .++|+|+|
T Consensus 102 V~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 102 VKDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred hcCccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecc
Confidence 8664 457899999996 433332 4488899999999999999999999999999999999999654 69999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCc----h
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFEL----S 244 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~----~ 244 (1553)
+|... .|.. -......+..|--||.+.. -..|+..-|+|||||+++.|+.. .|+|.+ +
T Consensus 179 LAEFY-Hp~~-------eYnVRVASRyfKGPELLVd---------y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D 241 (338)
T KOG0668|consen 179 LAEFY-HPGK-------EYNVRVASRYFKGPELLVD---------YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 241 (338)
T ss_pred hHhhc-CCCc-------eeeeeeehhhcCCchheee---------chhccccHHHHHHHHHHHHHHhccCcccCCCCCHH
Confidence 99754 2211 1223344667899998853 34678889999999999999998 555542 2
Q ss_pred HHHH------------HHh-cCCCCCCC--------------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHH
Q 000410 245 HLLA------------YRR-GQYDPSQH--------------------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291 (1553)
Q Consensus 245 ~~~~------------~~~-~~~~~~~~--------------------~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~ 291 (1553)
++.+ |.. -.....+. -....++++.+|+.++|..|-.+|+||.|++.
T Consensus 242 QLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 242 QLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 2221 110 00000000 11133578999999999999999999999999
Q ss_pred hhhcccCCCCCCc
Q 000410 292 NYAAVVFPTYFSP 304 (1553)
Q Consensus 292 ~~~~~~fP~~f~~ 304 (1553)
| +||++
T Consensus 322 H-------pyF~~ 327 (338)
T KOG0668|consen 322 H-------PYFAP 327 (338)
T ss_pred C-------chHHH
Confidence 8 67765
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=284.89 Aligned_cols=211 Identities=19% Similarity=0.326 Sum_probs=188.0
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
...++-||.++|+++.|+|+.+||+|||.|++||+|.+.+.. +...|.+|..+|+++.|+|.|.+|||||.|++
T Consensus 443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s------~~V~y~GH~~PVwdV~F~P~GyYFatas~D~t 516 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS------CLVIYKGHLAPVWDVQFAPRGYYFATASHDQT 516 (707)
T ss_pred eeEEeecCCCceeeeeecccccceeeccCCcceeeeecccce------eEEEecCCCcceeeEEecCCceEEEecCCCce
Confidence 456699999999999999999999999999999999998754 67789999999999999999999999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
.++|..+.. ...+...+|-+-|.|+.|||+ ..++++|+.|.+|++||+.+|..++.+.+ |.
T Consensus 517 ArLWs~d~~--------------~PlRifaghlsDV~cv~FHPN---s~Y~aTGSsD~tVRlWDv~~G~~VRiF~G--H~ 577 (707)
T KOG0263|consen 517 ARLWSTDHN--------------KPLRIFAGHLSDVDCVSFHPN---SNYVATGSSDRTVRLWDVSTGNSVRIFTG--HK 577 (707)
T ss_pred eeeeecccC--------------CchhhhcccccccceEEECCc---ccccccCCCCceEEEEEcCCCcEEEEecC--CC
Confidence 999999841 112334566778899999999 67999999999999999999999999977 99
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000410 1291 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1291 g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vW 1370 (1553)
++|++++|+|+|+||++|+.||.|++||+..+..+..+.. |.+.|.++.| + .+|..+++|++|+.|++|
T Consensus 578 ~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~-Ht~ti~SlsF-S---------~dg~vLasgg~DnsV~lW 646 (707)
T KOG0263|consen 578 GPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKG-HTGTIYSLSF-S---------RDGNVLASGGADNSVRLW 646 (707)
T ss_pred CceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhc-ccCceeEEEE-e---------cCCCEEEecCCCCeEEEE
Confidence 9999999999999999999999999999999999998876 4778888887 3 456699999999999999
Q ss_pred EcCCCcE
Q 000410 1371 NAENGSC 1377 (1553)
Q Consensus 1371 Dl~tg~~ 1377 (1553)
|+.+-.+
T Consensus 647 D~~~~~~ 653 (707)
T KOG0263|consen 647 DLTKVIE 653 (707)
T ss_pred Echhhcc
Confidence 9986443
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=284.70 Aligned_cols=198 Identities=26% Similarity=0.277 Sum_probs=167.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHH---HHHHHHHHHHHhcCC---CCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREY---ERRLFHIRETFRSID---HPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~---~~~l~~e~~~l~~l~---hpnIv~~~~~~~~~ 97 (1553)
+|+..+.||.|+||+|++|.|+. ..|+||.+.|...-.+.-.. .-.+--|+.||..++ |+||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 79999999999999999999976 45999998876321111000 112445678888887 99999999999999
Q ss_pred CEEEEEecccc-C-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 98 KAAYLLRQYFF-N-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 98 ~~~~lV~E~~~-g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
+++||+||--+ | +|+++|..++.++|.+++.|++|++.|+++||++||+|||||-||+.++++|-+||+|||.+..+.
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~k 721 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTK 721 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhc
Confidence 99999999888 5 999999999999999999999999999999999999999999999999999999999999886541
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCC
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 241 (1553)
+..|++..||..|.|||++.+..+ .+..-|||+||++||.++..+.||
T Consensus 722 ---------sgpfd~f~gtv~~aapevl~g~~y---------~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 722 ---------SGPFDVFVGTVDYAAPEVLGGEKY---------LGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred ---------CCCcceeeeeccccchhhhCCCcc---------CCCcchhhhhhheeeEEEeccCCC
Confidence 234677788999999998865443 366779999999999999886665
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=279.69 Aligned_cols=242 Identities=24% Similarity=0.331 Sum_probs=189.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC------CCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID------HPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~------hpnIv~~~~~~~~~ 97 (1553)
+|.+....|.|-|+.|.+|++.. ..||||++... +...+.=.+|.++|+.|+ --|+++|+..|...
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN------E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk 506 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN------EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK 506 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecc------hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence 68888889999999999999864 56999999654 344445557778999885 24799999999999
Q ss_pred CEEEEEeccccCCHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC-CcEEEeecCcccc
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPP---FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKP 173 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~---~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~-~~vkL~DFG~a~~ 173 (1553)
+++|||+|-+.-+|.+.|++-+ .|....++.++.||+.||..|-..||+|.||||+||||++. +.+||||||.|..
T Consensus 507 nHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 507 NHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred ceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccc
Confidence 9999999999999999998754 38889999999999999999999999999999999999975 5799999999876
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHH--
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLA-- 248 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~-- 248 (1553)
....+ .+.| ..+..|.|||++. +.+|+...|+||+||+||||+||+..|.+.. ++.
T Consensus 587 ~~ene-----itPY----LVSRFYRaPEIiL----------G~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~ 647 (752)
T KOG0670|consen 587 ASENE-----ITPY----LVSRFYRAPEIIL----------GLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLF 647 (752)
T ss_pred ccccc-----ccHH----HHHHhccCcceee----------cCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHH
Confidence 53222 2211 1234599999876 4577888999999999999999999997542 221
Q ss_pred -----------HHhcCCC-----CCCCC-----CC----------------------------CCC------HHHHHHHH
Q 000410 249 -----------YRRGQYD-----PSQHL-----EK----------------------------IPD------SGIRKMIL 273 (1553)
Q Consensus 249 -----------~~~~~~~-----~~~~~-----~~----------------------------~~~------~~l~~LI~ 273 (1553)
++++.+. ....+ .+ .++ ..+++|+.
T Consensus 648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd 727 (752)
T KOG0670|consen 648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD 727 (752)
T ss_pred HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence 1111111 00000 00 001 36889999
Q ss_pred HhcccCcCCCCCHHHHHHh
Q 000410 274 HMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 274 ~mL~~dP~~Rpsa~elL~~ 292 (1553)
+||..||++|.|..++|+|
T Consensus 728 kml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 728 KMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHhccChhhcCCHHHHhcC
Confidence 9999999999999999998
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=273.13 Aligned_cols=251 Identities=22% Similarity=0.246 Sum_probs=188.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc--CCCCCeeEEEEEEEeCC----E
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRS--IDHPHVWAFQFWQETDK----A 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~--l~hpnIv~~~~~~~~~~----~ 99 (1553)
..++.+.||+|+||.||+|...++.||||+|.. +.++.+..|++|.+. ++|+||++|++.-+... .
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~--------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE--------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhhccCceeEEEecCH--------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 578889999999999999999999999999943 344567777777765 57999999998765544 7
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCcEEEecCCcEEEeecC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK---------GICHGDIKCENVLVTSWNWLYLSDFA 169 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~---------gIvHrDIKp~NILv~~~~~vkL~DFG 169 (1553)
++||++|.+ |+|.++|+.+- +++.+..+|+.-+++||+|||+. .|+|||||..||||.+++...|+|||
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt-isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT-ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc-ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999 89999998765 89999999999999999999972 59999999999999999999999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC--------CCCC
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE--------VPFF 241 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg--------~~pf 241 (1553)
+|.... +....++. -...||..|||||++.+.-. .. ....-.++||||+|.||+||++. .|+|
T Consensus 362 LAl~~~-p~~~~~d~----~~qVGT~RYMAPEvLEgain---l~-d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 362 LALRLE-PGKPQGDT----HGQVGTRRYMAPEVLEGAIN---LQ-DRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred eeEEec-CCCCCcch----hhhhhhhhhcCHHHHhhhcc---cc-cHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 997664 22222221 22568999999999865321 11 12233579999999999999874 2223
Q ss_pred C------------chHHHHHHh-cCCCC--CCCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 242 E------------LSHLLAYRR-GQYDP--SQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 242 ~------------~~~~~~~~~-~~~~~--~~~~~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
. .+++..+.- .+.+| ...+.+. .-..+++.+..||+.||+.|.||.=+-+++.
T Consensus 433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~ 501 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMA 501 (534)
T ss_pred cCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence 2 112222211 11111 1112221 1246899999999999999999988777644
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-27 Score=264.18 Aligned_cols=253 Identities=21% Similarity=0.237 Sum_probs=187.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc--CCCCCeeEEEEEEEeCC----E
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRS--IDHPHVWAFQFWQETDK----A 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~--l~hpnIv~~~~~~~~~~----~ 99 (1553)
++++.+.||+|+||.||+|++.++.||||+|...+ ++...+|.++.+. ++|+||+.|++.-..++ .
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd--------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD--------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEecccc--------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 78999999999999999999999999999997652 2234455566554 58999999998754443 5
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--------GICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~--------gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
+|||++|.+ |+|+|+|... .++.....+++.-++.||+|||.. .|.|||||..||||.++|..-|+|+|+
T Consensus 284 LwLvTdYHe~GSL~DyL~r~-tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN-TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EEEeeecccCCcHHHHHhhc-cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 899999999 8999999884 599999999999999999999962 499999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-----C-----CCC
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-----E-----VPF 240 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-----g-----~~p 240 (1553)
|-...... ...........||..|||||++...-.. ....--..+||||||.|+||+.. | ++|
T Consensus 363 Av~h~~~t---~~idi~~N~rVGTKRYMAPEvLdetin~----~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 363 AVRHDSDT---DTIDIPPNPRVGTKRYMAPEVLDETINM----KHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred eEEecccC---CcccCCCCCccceeeccChHHhhhhcCh----hhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 86543221 2333345667899999999998643111 01111246899999999999974 2 466
Q ss_pred CC-----chHHHHHHhcCC--CCCCCCCC--CCCH---HHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 241 FE-----LSHLLAYRRGQY--DPSQHLEK--IPDS---GIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 241 f~-----~~~~~~~~~~~~--~~~~~~~~--~~~~---~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
|. ..+...+++-.. ...+.++. ..++ .+.+|++.||..||..|.||--+-+.+.
T Consensus 436 yyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 436 YYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred cccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHH
Confidence 63 223334433211 11122222 1223 4567899999999999999988776543
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-28 Score=261.30 Aligned_cols=249 Identities=24% Similarity=0.298 Sum_probs=191.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+++-.+.||-|+||.||.+.+.. +.|++|.+..- ...-...+++.+|..+|..++|.||+..+++.+-..
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv---fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV---FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchH---HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHH
Confidence 55667899999999999998863 56999988432 222334556778888999999999999888775543
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.+|+++|++..+|...|-....|+...++-+++||++||+|||+.||.||||||.|.||+++..+||||||+++.-....
T Consensus 131 EiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 131 ELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence 47899999999999999888889999999999999999999999999999999999999999999999999998542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----H--------
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----L-------- 246 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~-------- 246 (1553)
.........|.+|+|||++++. ..|+.+.||||+|||+.||+..+-.|.... +
T Consensus 211 ------~~hMTqEVVTQYYRAPEiLMGa---------RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLG 275 (449)
T KOG0664|consen 211 ------RLNMTHEVVTQYYRAPELLMGA---------RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLG 275 (449)
T ss_pred ------hhhhHHHHHHHHhccHHHhhcc---------hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhC
Confidence 1112222347789999998753 478999999999999999998888885321 1
Q ss_pred ----HHH------------HhcCCCCC-CCCCCCC-----CHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 247 ----LAY------------RRGQYDPS-QHLEKIP-----DSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 247 ----~~~------------~~~~~~~~-~~~~~~~-----~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+ +.+...+. +.+..+. ..+...++.+||..||++|.+.++++.|
T Consensus 276 TPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 276 TPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred CCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 111 11111111 1111122 2456789999999999999999999987
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=236.90 Aligned_cols=296 Identities=14% Similarity=0.211 Sum_probs=226.0
Q ss_pred cEeeeccccccCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcccccccccee-eecCCCceEEEEEecCCcEEEEEeC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDISFRSRLT-YHLEGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd-~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~-~~~h~~~I~~l~f~~~~~~las~s~ 1207 (1553)
.++..+++|++.|..++|+|. |..|||||.|++||||+...+. . +.++.. -.+|...|.+++|+|.|++||+||.
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~-s--~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGD-S--WTCKTVLDDGHKRSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCC-c--EEEEEeccccchheeeeeeecCCCcEEEEeec
Confidence 357889999999999999998 8899999999999999998532 1 222222 2368888999999999999999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC---ccccee
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN---SNTWTL 1284 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~---~~~~~l 1284 (1553)
|+++-||.-.. +.-.+.....+|...|.+++|+++ |++|++++.|.+|-+|.+..+ ++...|
T Consensus 82 D~t~~Iw~k~~------------~efecv~~lEGHEnEVK~Vaws~s---G~~LATCSRDKSVWiWe~deddEfec~aVL 146 (312)
T KOG0645|consen 82 DATVVIWKKED------------GEFECVATLEGHENEVKCVAWSAS---GNYLATCSRDKSVWIWEIDEDDEFECIAVL 146 (312)
T ss_pred cceEEEeecCC------------CceeEEeeeeccccceeEEEEcCC---CCEEEEeeCCCeEEEEEecCCCcEEEEeee
Confidence 99999996531 111222334467889999999998 789999999999999999854 356667
Q ss_pred ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCC---CCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLR---FLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1285 ~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr---~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
+. |...|.-+.|+|....|++++.|.+|++|+-. ...++.++.. +...|.++.| ++. |..++++
T Consensus 147 ~~--HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g-~~~TVW~~~F-~~~---------G~rl~s~ 213 (312)
T KOG0645|consen 147 QE--HTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG-HENTVWSLAF-DNI---------GSRLVSC 213 (312)
T ss_pred cc--ccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecC-ccceEEEEEe-cCC---------CceEEEe
Confidence 65 88899999999999999999999999999865 2345666665 4446777777 543 4579999
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.|+.|+||-.-+.- . .-|...++.+.|.
T Consensus 214 sdD~tv~Iw~~~~~~-----~----------------------------------------------~~~sr~~Y~v~W~ 242 (312)
T KOG0645|consen 214 SDDGTVSIWRLYTDL-----S----------------------------------------------GMHSRALYDVPWD 242 (312)
T ss_pred cCCcceEeeeeccCc-----c----------------------------------------------hhcccceEeeeec
Confidence 999999999865210 0 0122357888887
Q ss_pred CCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccC
Q 000410 1442 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAG 1521 (1553)
Q Consensus 1442 p~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1521 (1553)
+|.|+|||.|+.||++.-.. ++. .+.| .. ......
T Consensus 243 -~~~IaS~ggD~~i~lf~~s~--------~~d------~p~~---------------------~l---------~~~~~~ 277 (312)
T KOG0645|consen 243 -NGVIASGGGDDAIRLFKESD--------SPD------EPSW---------------------NL---------LAKKEG 277 (312)
T ss_pred -ccceEeccCCCEEEEEEecC--------CCC------CchH---------------------HH---------HHhhhc
Confidence 88999999999999997541 110 0110 00 011223
Q ss_pred CCccceeEEeeeecC-CcEEEEEcCCceEEEcC
Q 000410 1522 CHRDSILSLGSVKLN-QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1522 ~H~d~I~~va~~~~~-~~~LvSas~DG~IkVWk 1553 (1553)
.|...|++| .|++. ...|+|||+||+|++|+
T Consensus 278 aHe~dVNsV-~w~p~~~~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 278 AHEVDVNSV-QWNPKVSNRLASGGDDGIVNFWE 309 (312)
T ss_pred ccccccceE-EEcCCCCCceeecCCCceEEEEE
Confidence 599999999 79985 77899999999999995
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=261.96 Aligned_cols=234 Identities=26% Similarity=0.312 Sum_probs=187.8
Q ss_pred CcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccccC-CHHH
Q 000410 37 RFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRD 113 (1553)
Q Consensus 37 ~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~g-sL~d 113 (1553)
+||.||+|.+.+ ..+++|++...... ...+.+.+|.+.++.++|+||+++++++..+...++++||+++ +|.+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~ 76 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIK----KKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFD 76 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccc----cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHH
Confidence 589999999865 67999998654221 1156778888999999999999999999999999999999996 9999
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCC
Q 000410 114 RLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK 193 (1553)
Q Consensus 114 ~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~g 193 (1553)
++.....++...+..++.|++.++.+||+.|++|+||+|.||+++.++.++|+|||.+....... ......+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~~ 148 (244)
T smart00220 77 LLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------LLTTFVG 148 (244)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--------ccccccC
Confidence 99876668999999999999999999999999999999999999999999999999987653221 1223345
Q ss_pred CccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc-hHHHHHHhcCCCCCCC---CCCCCCHHHH
Q 000410 194 RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL-SHLLAYRRGQYDPSQH---LEKIPDSGIR 269 (1553)
Q Consensus 194 t~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~-~~~~~~~~~~~~~~~~---~~~~~~~~l~ 269 (1553)
+..|+|||.+. ...++.++||||+|+++++|++|.+||.. ................ .....+..+.
T Consensus 149 ~~~~~~pE~~~----------~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (244)
T smart00220 149 TPEYMAPEVLL----------GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAK 218 (244)
T ss_pred CcCCCCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHH
Confidence 77899999764 34567899999999999999999989865 3333222211111111 1111456899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHh
Q 000410 270 KMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+++.+||..+|++||++.+++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHccCCchhccCHHHHhhC
Confidence 99999999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.2e-25 Score=260.03 Aligned_cols=346 Identities=18% Similarity=0.257 Sum_probs=262.2
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1209 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG 1209 (1553)
.+..++.||-+.|++|.|+.|.++|++||.|-++|||+++..+.. ....+.+|...|..+-|..+...+++.+.||
T Consensus 136 vl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~----~~~~l~gHkd~VvacfF~~~~~~l~tvskdG 211 (893)
T KOG0291|consen 136 VLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNL----FTYALNGHKDYVVACFFGANSLDLYTVSKDG 211 (893)
T ss_pred eEeeeecCCccceeEEEeccCCceEEeccccceEEEEEecccccc----ceEeccCCCcceEEEEeccCcceEEEEecCc
Confidence 456788899999999999999999999999999999999876531 2346778999999999999999999999999
Q ss_pred cEEEEEeeecccCCCc-----------------cccccc---cccceecccCCCcEEEEEEecCCCCcceEEEEEeCCce
Q 000410 1210 IIHMFSVDHISRGLGN-----------------VEKYSG---ISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCG 1269 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~ 1269 (1553)
.+.+|.++........ .++..+ ....+.+..+.+..|.+.+||+. .++|++|=..|.
T Consensus 212 ~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~---t~~lvvgFssG~ 288 (893)
T KOG0291|consen 212 ALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKG---TNLLVVGFSSGE 288 (893)
T ss_pred eEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCC---ceEEEEEecCCe
Confidence 9999998721100000 000000 01112333445578899999998 679999999999
Q ss_pred EEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCC-CcEEEEeCCCCcccceeeccccCCcceEEeecCCCCC
Q 000410 1270 IHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSR-GVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1348 (1553)
Q Consensus 1270 I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~d-G~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~ 1348 (1553)
..++++..-.+++.+.. ....|.+++|+..|.|++.|+.. |.+-+|+.+...-+-..+. |...+.++.+ +|
T Consensus 289 f~LyelP~f~lih~LSi--s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQg-H~~~i~~l~Y-Sp---- 360 (893)
T KOG0291|consen 289 FGLYELPDFNLIHSLSI--SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQG-HSDRITSLAY-SP---- 360 (893)
T ss_pred eEEEecCCceEEEEeec--ccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccc-cccceeeEEE-CC----
Confidence 99999999888888876 45679999999999999999875 8999999987776655443 5567888877 55
Q ss_pred ccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCC
Q 000410 1349 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEP 1428 (1553)
Q Consensus 1349 ~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 1428 (1553)
+|.++++|+.||.|+|||..+|-|..+|..+
T Consensus 361 -----Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteH-------------------------------------------- 391 (893)
T KOG0291|consen 361 -----DGQLIATGAEDGKVKVWNTQSGFCFVTFTEH-------------------------------------------- 391 (893)
T ss_pred -----CCcEEEeccCCCcEEEEeccCceEEEEeccC--------------------------------------------
Confidence 4569999999999999999999999998733
Q ss_pred CCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecC--CeEEEEeeecC-Ccch
Q 000410 1429 PPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSS--GVQVVQERKRQ-PLTS 1504 (1553)
Q Consensus 1429 ~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~-~~~~ 1504 (1553)
..+|+++.|+..| .+++.+-||+||.||+.+..+=+.+..|+ +.++..-..+ |-.+....... ..-.
T Consensus 392 ---ts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~------p~QfscvavD~sGelV~AG~~d~F~Ifv 462 (893)
T KOG0291|consen 392 ---TSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPE------PIQFSCVAVDPSGELVCAGAQDSFEIFV 462 (893)
T ss_pred ---CCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCC------ceeeeEEEEcCCCCEEEeeccceEEEEE
Confidence 3379999999888 57799999999999999988888888764 2333333322 33333221000 0000
Q ss_pred hhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1505 KLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1505 ~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+ +.......+.+.||.++|.++ +|++.+..|+|+|+|.+||+|+
T Consensus 463 W----S~qTGqllDiLsGHEgPVs~l-~f~~~~~~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 463 W----SVQTGQLLDILSGHEGPVSGL-SFSPDGSLLASGSWDKTVRIWD 506 (893)
T ss_pred E----EeecCeeeehhcCCCCcceee-EEccccCeEEeccccceEEEEE
Confidence 0 000111245677999999999 8999999999999999999995
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-26 Score=244.57 Aligned_cols=293 Identities=20% Similarity=0.329 Sum_probs=235.9
Q ss_pred ccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--cccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEE
Q 000410 1137 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE--KDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMF 1214 (1553)
Q Consensus 1137 ~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~--~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vw 1214 (1553)
+.+.-+-|..|||||.|++|||-||-+.|||..++. ++..+...-.+-.+...|.|++|+.++..+|+|+.||.|+||
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 345567889999999999999999999999988765 344444444556677889999999999999999999999999
Q ss_pred EeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceE
Q 000410 1215 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1294 (1553)
Q Consensus 1215 di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~It 1294 (1553)
++.+. .++|.++..|...|+++.|+.+ +..+.+++.|.++++..+.+|++...+.+ |...|+
T Consensus 291 ri~tG-------------~ClRrFdrAHtkGvt~l~FSrD---~SqiLS~sfD~tvRiHGlKSGK~LKEfrG--HsSyvn 352 (508)
T KOG0275|consen 291 RIETG-------------QCLRRFDRAHTKGVTCLSFSRD---NSQILSASFDQTVRIHGLKSGKCLKEFRG--HSSYVN 352 (508)
T ss_pred EEecc-------------hHHHHhhhhhccCeeEEEEccC---cchhhcccccceEEEeccccchhHHHhcC--cccccc
Confidence 99852 2677777788888999999999 66899999999999999999999999987 999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeecc-ccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcC
Q 000410 1295 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS-QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1373 (1553)
Q Consensus 1295 sl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~-~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~ 1373 (1553)
...|.++|+.++++++||+|++|+..+..|+.++... ...+|+.+.. .|.. -..++++...++|.|-++.
T Consensus 353 ~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~-~PKn--------peh~iVCNrsntv~imn~q 423 (508)
T KOG0275|consen 353 EATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVIL-LPKN--------PEHFIVCNRSNTVYIMNMQ 423 (508)
T ss_pred ceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEE-cCCC--------CceEEEEcCCCeEEEEecc
Confidence 9999999999999999999999999999999998864 3457777766 3432 2468888889999999987
Q ss_pred CCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCC
Q 000410 1374 NGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTD 1452 (1553)
Q Consensus 1374 tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~D 1452 (1553)
|+..+.+......+. ..|.| ..+|.| ++.+.|.|
T Consensus 424 -GQvVrsfsSGkREgG-------------------------------------------dFi~~-~lSpkGewiYcigED 458 (508)
T KOG0275|consen 424 -GQVVRSFSSGKREGG-------------------------------------------DFINA-ILSPKGEWIYCIGED 458 (508)
T ss_pred -ceEEeeeccCCccCC-------------------------------------------ceEEE-EecCCCcEEEEEccC
Confidence 777776653221100 03444 445766 88899999
Q ss_pred CeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEee
Q 000410 1453 LKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGS 1532 (1553)
Q Consensus 1453 g~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~ 1532 (1553)
+.++.+.+.+++.-..+. -|..-|..+ .
T Consensus 459 ~vlYCF~~~sG~LE~tl~---------------------------------------------------VhEkdvIGl-~ 486 (508)
T KOG0275|consen 459 GVLYCFSVLSGKLERTLP---------------------------------------------------VHEKDVIGL-T 486 (508)
T ss_pred cEEEEEEeecCceeeeee---------------------------------------------------ccccccccc-c
Confidence 999999987665433221 155556667 4
Q ss_pred eecCCcEEEEEcCCceEEEcC
Q 000410 1533 VKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1533 ~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-+|....|+|=+.||.+|+||
T Consensus 487 HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 487 HHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cCcccchhhhhcccchhhhcC
Confidence 678889999999999999997
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-25 Score=253.28 Aligned_cols=286 Identities=16% Similarity=0.237 Sum_probs=230.9
Q ss_pred ccccCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCC----CccccccccceeeecCC----CceEEEEEecCCcEEEEEeC
Q 000410 1137 EHCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRK----LEKDISFRSRLTYHLEG----SRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1137 ~H~~~V~~l~~spd~~-~laSgS~DGtVkIWD~~~----~~~~~~~~~~~~~~~h~----~~I~~l~f~~~~~~las~s~ 1207 (1553)
+|+..|.+++|+|-.. .+++|+.|-+.++|++.. +.....+|....+.+++ ..|++++|+.+|+.||+|+.
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~ 255 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSE 255 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeec
Confidence 3999999999999665 999999999999999874 11112233333333322 46999999999999999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
||.+++|+.+. .+......|..+|..+.|+.. |.+|++++.|+++.+||..+++....+..
T Consensus 256 ~G~~riw~~~G---------------~l~~tl~~HkgPI~slKWnk~---G~yilS~~vD~ttilwd~~~g~~~q~f~~- 316 (524)
T KOG0273|consen 256 DGEARIWNKDG---------------NLISTLGQHKGPIFSLKWNKK---GTYILSGGVDGTTILWDAHTGTVKQQFEF- 316 (524)
T ss_pred CcEEEEEecCc---------------hhhhhhhccCCceEEEEEcCC---CCEEEeccCCccEEEEeccCceEEEeeee-
Confidence 99999999872 122233467888999999998 77999999999999999999998887766
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
|..+-..+.|-. ..-+++.+.||.++++-+.-..|++++.+ |..+|..+.| .|. +.+++++|.|+++
T Consensus 317 -~s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~G-H~g~V~alk~-n~t---------g~LLaS~SdD~Tl 383 (524)
T KOG0273|consen 317 -HSAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIG-HHGEVNALKW-NPT---------GSLLASCSDDGTL 383 (524)
T ss_pred -ccCCccceEEec-CceEeecCCCceEEEEEecCCCcceeeec-ccCceEEEEE-CCC---------CceEEEecCCCee
Confidence 666656677754 35788899999999999999999999998 8889999999 554 4599999999999
Q ss_pred EEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC---
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--- 1444 (1553)
Q Consensus 1368 ~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g--- 1444 (1553)
+||......|...+..++. .|..+.|+|.|
T Consensus 384 kiWs~~~~~~~~~l~~Hsk-----------------------------------------------ei~t~~wsp~g~v~ 416 (524)
T KOG0273|consen 384 KIWSMGQSNSVHDLQAHSK-----------------------------------------------EIYTIKWSPTGPVT 416 (524)
T ss_pred EeeecCCCcchhhhhhhcc-----------------------------------------------ceeeEeecCCCCcc
Confidence 9999988777666654332 46666666644
Q ss_pred -------eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhc
Q 000410 1445 -------DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAAT 1517 (1553)
Q Consensus 1445 -------~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 1517 (1553)
.+++++.|.+|++||+..+...+.+.
T Consensus 417 ~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~----------------------------------------------- 449 (524)
T KOG0273|consen 417 SNPNMNLMLASASFDSTVKLWDVESGVPIHTLM----------------------------------------------- 449 (524)
T ss_pred CCCcCCceEEEeecCCeEEEEEccCCceeEeec-----------------------------------------------
Confidence 58899999999999998776555432
Q ss_pred CccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1518 DSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1518 ~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|+++|.+| .|+++|++++||+.||.|.+|.
T Consensus 450 ----kH~~pVysv-afS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 450 ----KHQEPVYSV-AFSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred ----cCCCceEEE-EecCCCcEEEecCCCCeeEecc
Confidence 299999999 7999999999999999999994
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-25 Score=265.08 Aligned_cols=298 Identities=15% Similarity=0.254 Sum_probs=239.7
Q ss_pred cCccEeeeccccccCeeEEEE-cCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEE
Q 000410 1127 PRGILVAHLQEHCSAVNEIAI-SHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVG 1205 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~-spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~ 1205 (1553)
..++++.++-|..+.|.+++| .|+.+++|.|++.+.+|++++.+.. ...+.+|...|.++.....|..|++|
T Consensus 311 ~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~-------c~ii~GH~e~vlSL~~~~~g~llat~ 383 (775)
T KOG0319|consen 311 DELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSY-------CQIIPGHTEAVLSLDVWSSGDLLATG 383 (775)
T ss_pred cccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCc-------eEEEeCchhheeeeeecccCcEEEEe
Confidence 347788999999999999998 5677899999999999999988765 23788999999999966677899999
Q ss_pred eCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc---
Q 000410 1206 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW--- 1282 (1553)
Q Consensus 1206 s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~--- 1282 (1553)
|.|.++++|+++... ... .+......|...|.+++++..+.+ .+++++.|+++++|+++..+...
T Consensus 384 sKD~svilWr~~~~~---------~~~-~~~a~~~gH~~svgava~~~~~as--ffvsvS~D~tlK~W~l~~s~~~~~~~ 451 (775)
T KOG0319|consen 384 SKDKSVILWRLNNNC---------SKS-LCVAQANGHTNSVGAVAGSKLGAS--FFVSVSQDCTLKLWDLPKSKETAFPI 451 (775)
T ss_pred cCCceEEEEEecCCc---------chh-hhhhhhcccccccceeeecccCcc--EEEEecCCceEEEecCCCcccccccc
Confidence 999999999995211 111 112223356677788888777544 99999999999999998722111
Q ss_pred ee----ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEE
Q 000410 1283 TL----KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1283 ~l----~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l 1358 (1553)
.+ ....|...|+|++++|+...+++||.|.+.++|++.....+..+.. |..++.++.| +|.. ..+
T Consensus 452 ~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG-H~RGvw~V~F-s~~d---------q~l 520 (775)
T KOG0319|consen 452 VLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG-HTRGVWCVSF-SKND---------QLL 520 (775)
T ss_pred eehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC-CccceEEEEe-cccc---------cee
Confidence 11 1224788899999999999999999999999999996666666665 7788999988 5543 489
Q ss_pred EEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEe
Q 000410 1359 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438 (1553)
Q Consensus 1359 ~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1438 (1553)
+++|+|.+|+||.++++.|.++|.++.. .|--+
T Consensus 521 aT~SgD~TvKIW~is~fSClkT~eGH~~-----------------------------------------------aVlra 553 (775)
T KOG0319|consen 521 ATCSGDKTVKIWSISTFSCLKTFEGHTS-----------------------------------------------AVLRA 553 (775)
T ss_pred EeccCCceEEEEEeccceeeeeecCccc-----------------------------------------------eeEee
Confidence 9999999999999999999999975443 45555
Q ss_pred ccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhc
Q 000410 1439 LPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAAT 1517 (1553)
Q Consensus 1439 ~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 1517 (1553)
.|-.+| +|++||.||-|++|++++.++...+-
T Consensus 554 ~F~~~~~qliS~~adGliKlWnikt~eC~~tlD----------------------------------------------- 586 (775)
T KOG0319|consen 554 SFIRNGKQLISAGADGLIKLWNIKTNECEMTLD----------------------------------------------- 586 (775)
T ss_pred eeeeCCcEEEeccCCCcEEEEeccchhhhhhhh-----------------------------------------------
Confidence 555555 89999999999999999877654222
Q ss_pred CccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1518 DSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1518 ~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|.|.|+++ ..++...|++||+.||.|.+|+
T Consensus 587 ----~H~DrvWaL-~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 587 ----AHNDRVWAL-SVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred ----hccceeEEE-eecCccceeEecCCCeEEEEee
Confidence 399999999 6788888999999999999997
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-25 Score=239.12 Aligned_cols=303 Identities=15% Similarity=0.181 Sum_probs=232.2
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---------ccc---ccccceeeecCCCceEEEEEecCC
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE---------KDI---SFRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~---------~~~---~~~~~~~~~~h~~~I~~l~f~~~~ 1199 (1553)
-..+..|++++.+-+|+|||.++||||.|-.|||.|+.++- .+. .-....++..|...|+++.|+|..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 35788999999999999999999999999999999998421 000 011234666788899999999999
Q ss_pred cEEEEEeCCCcEEEEEeeecccCCCccccccccccceec-ccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKK-DTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1278 (1553)
Q Consensus 1200 ~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~ 1278 (1553)
+.|++|+.|++|++||+.... ..+.+ ...+-..|.++.|+|. |.+|+.|+....+++||+.|-
T Consensus 185 ~ILiS~srD~tvKlFDfsK~s-------------aKrA~K~~qd~~~vrsiSfHPs---GefllvgTdHp~~rlYdv~T~ 248 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTS-------------AKRAFKVFQDTEPVRSISFHPS---GEFLLVGTDHPTLRLYDVNTY 248 (430)
T ss_pred heEEeccCCCeEEEEecccHH-------------HHHHHHHhhccceeeeEeecCC---CceEEEecCCCceeEEeccce
Confidence 999999999999999996211 11111 1234568899999998 889999999999999999998
Q ss_pred cccce-eccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccC-CcceEEeecCCCCCccccCCCC
Q 000410 1279 SNTWT-LKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARP 1356 (1553)
Q Consensus 1279 ~~~~~-l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~-~I~~l~~~~p~~~~~~~s~~~~ 1356 (1553)
+|-.. .+...|.+.|+++.+++.|+..++|+.||.|++||--...|+.++...|.+ .|.+..| .-+|+
T Consensus 249 QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~F----------tkn~k 318 (430)
T KOG0640|consen 249 QCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVF----------TKNGK 318 (430)
T ss_pred eEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEE----------ccCCe
Confidence 87532 344568999999999999999999999999999999999999999877665 4555555 44678
Q ss_pred EEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcE
Q 000410 1357 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1436 (1553)
Q Consensus 1357 ~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1436 (1553)
++++.+.|..|++|++.+|.++..+.+....+... --+
T Consensus 319 yiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~------------------------------------------~rt 356 (430)
T KOG0640|consen 319 YILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQK------------------------------------------HRT 356 (430)
T ss_pred EEeecCCcceeeeeeecCCceEEEEecCCcccchh------------------------------------------hhh
Confidence 99999999999999999999999998543211100 001
Q ss_pred EeccCCC-CeEE-EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhh
Q 000410 1437 SLLPLPG-GDLL-TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1514 (1553)
Q Consensus 1437 sl~~sp~-g~ll-Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1514 (1553)
...|+.. .+++ ---..+.+.-||-++..+...++
T Consensus 357 qAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s-------------------------------------------- 392 (430)
T KOG0640|consen 357 QAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS-------------------------------------------- 392 (430)
T ss_pred hhhhcCccceEEccccccCceeeccccchhhhhhcc--------------------------------------------
Confidence 1112222 2333 33446778899987665433221
Q ss_pred hhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1515 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1515 ~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-+|.+.+..+ .-+|.++.+.|||.|-.+++|.
T Consensus 393 ------lgHn~a~R~i-~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 393 ------LGHNGAVRWI-VHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred ------cCCCCCceEE-EeCCCCCceeeecccceeeeee
Confidence 2499999999 6788899999999999999995
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=277.09 Aligned_cols=249 Identities=17% Similarity=0.131 Sum_probs=199.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-C-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-E-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
..+..++||+|+||+||+|.+- + -+||+|++..... .+...++.+|+-+|.+++|||++++++++....
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~----~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~- 771 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS----PKASIELLDEALRMASLDHPNLLRLLGVCMLST- 771 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC----chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-
Confidence 4566789999999999999872 2 3599999876522 233456778888999999999999999998766
Q ss_pred EEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 AYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
..||++|++ |+|.|+++. +..+...+.+.|..||++|+.|||+++++||||-..||||.+-+.+|+.|||+++.....
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 889999999 899999975 466999999999999999999999999999999999999999999999999999865322
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCCCC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDP 256 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~~~ 256 (1553)
+..+......-.+.|||=|.+. ...|+.++||||+||++||++| |..|+..-....+..-....
T Consensus 852 -----~~ey~~~~gK~pikwmale~i~----------~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g 916 (1177)
T KOG1025|consen 852 -----EKEYSAPGGKVPIKWMALESIR----------IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG 916 (1177)
T ss_pred -----cccccccccccCcHHHHHHHhh----------ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc
Confidence 2223333333455688888654 5689999999999999999998 67777655544443221111
Q ss_pred -CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 257 -SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 -~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.-..+.+.+.++.-++.+||..|++.||+++++...+.
T Consensus 917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs 955 (1177)
T KOG1025|consen 917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFS 955 (1177)
T ss_pred ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence 12345677789999999999999999999999998865
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-26 Score=315.54 Aligned_cols=236 Identities=17% Similarity=0.198 Sum_probs=178.6
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+...+.||+|+||.||+|++. +..||+|.+...... . ..|++.+++++||||+++++++.++...|+||
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~--------~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-P--------SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-c--------HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 455678999999999999974 467999988543211 1 12357788999999999999999999999999
Q ss_pred cccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 105 QYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH---EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH---~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
||++ |+|.+++.. +++.++..|+.|++.||+||| +.+|+||||||+||+++.++..++. ||.......
T Consensus 763 Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---- 834 (968)
T PLN00113 763 EYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---- 834 (968)
T ss_pred eCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence 9999 699999963 789999999999999999999 6799999999999999998887775 654432210
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHhcCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRRGQYD 255 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~~~~~ 255 (1553)
.....+++.|+|||.+. ...++.++||||+||++|||++|++||+.. ....+.+..+.
T Consensus 835 -------~~~~~~t~~y~aPE~~~----------~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 897 (968)
T PLN00113 835 -------DTKCFISSAYVAPETRE----------TKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS 897 (968)
T ss_pred -------CCCccccccccCccccc----------CCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC
Confidence 01224678899999654 346889999999999999999999998532 11221111110
Q ss_pred C-------CCCCCC---C---CCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcc
Q 000410 256 P-------SQHLEK---I---PDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 256 ~-------~~~~~~---~---~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 296 (1553)
. .+.+.. . ...++.+++.+||+.||++||+++|+++.++..
T Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 898 DCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred ccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 0 011100 0 112567899999999999999999999987643
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=269.20 Aligned_cols=260 Identities=20% Similarity=0.240 Sum_probs=218.7
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-------------------------cccccccceeee
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE-------------------------KDISFRSRLTYH 1184 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~-------------------------~~~~~~~~~~~~ 1184 (1553)
.+..+++--...|+|..|++|+..+|.|-.|..|++|.+.... .........++.
T Consensus 369 ic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~ 448 (707)
T KOG0263|consen 369 ICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLY 448 (707)
T ss_pred EEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEee
Confidence 3666666555789999999999999999999999999987210 000111234578
Q ss_pred cCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEE
Q 000410 1185 LEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYS 1264 (1553)
Q Consensus 1185 ~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~ 1264 (1553)
+|+++|..+.|+|+.+.|++||.|++||+|.+++- .......+|-.+|+.+.|+|. |-++++|
T Consensus 449 GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~--------------s~~V~y~GH~~PVwdV~F~P~---GyYFata 511 (707)
T KOG0263|consen 449 GHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTW--------------SCLVIYKGHLAPVWDVQFAPR---GYYFATA 511 (707)
T ss_pred cCCCceeeeeecccccceeeccCCcceeeeecccc--------------eeEEEecCCCcceeeEEecCC---ceEEEec
Confidence 99999999999999999999999999999999841 222233378889999999999 6699999
Q ss_pred eCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecC
Q 000410 1265 TQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVP 1344 (1553)
Q Consensus 1265 s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p 1344 (1553)
+.|++-++|........+.+.+ |.+.|.|+.|+|+++++++||+|.+|++||..++..++.+.. |.++|..+++ +|
T Consensus 512 s~D~tArLWs~d~~~PlRifag--hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~~~V~al~~-Sp 587 (707)
T KOG0263|consen 512 SHDQTARLWSTDHNKPLRIFAG--HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-HKGPVTALAF-SP 587 (707)
T ss_pred CCCceeeeeecccCCchhhhcc--cccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-CCCceEEEEE-cC
Confidence 9999999999998888888876 999999999999999999999999999999999999999976 8889999988 54
Q ss_pred CCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccc
Q 000410 1345 PPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDE 1424 (1553)
Q Consensus 1345 ~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 1424 (1553)
+|+++++|+.||.|.+||+.+|..+..+..
T Consensus 588 ---------~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~----------------------------------------- 617 (707)
T KOG0263|consen 588 ---------CGRYLASGDEDGLIKIWDLANGSLVKQLKG----------------------------------------- 617 (707)
T ss_pred ---------CCceEeecccCCcEEEEEcCCCcchhhhhc-----------------------------------------
Confidence 577999999999999999999876655543
Q ss_pred cCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCc
Q 000410 1425 LNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRS 1466 (1553)
Q Consensus 1425 l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s 1466 (1553)
|...|.++.|+.+| .|++||.|..|++||+......
T Consensus 618 ------Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~ 654 (707)
T KOG0263|consen 618 ------HTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIEL 654 (707)
T ss_pred ------ccCceeEEEEecCCCEEEecCCCCeEEEEEchhhccc
Confidence 23368999999998 6679999999999999866544
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=276.10 Aligned_cols=258 Identities=17% Similarity=0.148 Sum_probs=172.3
Q ss_pred ceEEEEEeeccCcEEEEEEEE------------------CCceEEEEEEeccCCCcCHHHHH----------HHHHHHHH
Q 000410 26 NLVLKEVLGGSRFFKSILCKH------------------DEGLVLVKVYFKRGDYIDLREYE----------RRLFHIRE 77 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~------------------~~~~vavKv~~~~~~~~~~~~~~----------~~l~~e~~ 77 (1553)
+|.+.++||+|+||.||+|.. .+..||||.+....... .+++. +....|..
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~-~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGV-RQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhh-HHHHHhhhhhhhcccchhHHHHH
Confidence 899999999999999999964 12459999985432110 11111 11223445
Q ss_pred HHhcCCCCC-----eeEEEEEEEe--------CCEEEEEecccc-CCHHHHhcCC------------------------C
Q 000410 78 TFRSIDHPH-----VWAFQFWQET--------DKAAYLLRQYFF-NSLRDRLSTP------------------------P 119 (1553)
Q Consensus 78 ~l~~l~hpn-----Iv~~~~~~~~--------~~~~~lV~E~~~-gsL~d~l~~~------------------------~ 119 (1553)
++..++|.+ ++++++++.. ....|||+||++ ++|.+++... .
T Consensus 225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~ 304 (507)
T PLN03224 225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD 304 (507)
T ss_pred HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence 556665554 3566666542 346899999999 6998888532 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccC
Q 000410 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLA 199 (1553)
Q Consensus 120 ~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 199 (1553)
.+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++........ . ......+++.|+|
T Consensus 305 ~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~----~--~~~~g~~tp~Y~a 378 (507)
T PLN03224 305 KRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN----F--NPLYGMLDPRYSP 378 (507)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----c--CccccCCCcceeC
Confidence 235667888999999999999999999999999999999999999999999864321110 0 1112234788999
Q ss_pred cchhcccCCcccc------------ccCCCCCCcccHHHHHHHHHHHHcCC-CCCCchHHH------------HH---Hh
Q 000410 200 PERFYEHGGEMQV------------AQDAPLKPSMDIFAVGCVIAELFLEV-PFFELSHLL------------AY---RR 251 (1553)
Q Consensus 200 PE~~~~~~~~~~~------------~~~~~~t~~~DIwSlG~il~eLltg~-~pf~~~~~~------------~~---~~ 251 (1553)
||.+......... ........+.||||+||++|+|+++. .||...... .+ ..
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 9988632211000 00011223579999999999999984 466421111 11 11
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHhcccCc---CCCCCHHHHHHh
Q 000410 252 GQYDPSQHLEKIPDSGIRKMILHMIQLEP---ELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~~~~~~~~~~~~~l~~LI~~mL~~dP---~~Rpsa~elL~~ 292 (1553)
..+.. ......++..++|+.+||..+| .+|+|++|+|+|
T Consensus 459 ~~~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 459 QKYDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred cCCCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 11111 1122345789999999999876 689999999999
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-25 Score=233.94 Aligned_cols=260 Identities=18% Similarity=0.262 Sum_probs=216.4
Q ss_pred Ccc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEE
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~l 1202 (1553)
.|+ ..++-++.+.--..+|-.++|+|.|.++|.|+-|+.+.|+++...+.....+....+.+|.+.+.|+.|.+ ..+|
T Consensus 81 vWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~i 159 (343)
T KOG0286|consen 81 VWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHI 159 (343)
T ss_pred EEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCce
Confidence 476 33455666666778999999999999999999999999999996644444455567889999999999987 5678
Q ss_pred EEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 as~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
+++|.|.+.-+||+++.. ......+|..-|..+.+.|.. ++.+++|+-|+.-++||+|.+.+++
T Consensus 160 lT~SGD~TCalWDie~g~--------------~~~~f~GH~gDV~slsl~p~~--~ntFvSg~cD~~aklWD~R~~~c~q 223 (343)
T KOG0286|consen 160 LTGSGDMTCALWDIETGQ--------------QTQVFHGHTGDVMSLSLSPSD--GNTFVSGGCDKSAKLWDVRSGQCVQ 223 (343)
T ss_pred EecCCCceEEEEEcccce--------------EEEEecCCcccEEEEecCCCC--CCeEEecccccceeeeeccCcceeE
Confidence 899999999999998522 122233566677888999952 7799999999999999999999999
Q ss_pred eeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccc-cCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1283 TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1283 ~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~-~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
+|.+ |...|++++|.|+|.-+++|+.|++.++||+|....+..+++.. ..+|+++.| +..|+++++|
T Consensus 224 tF~g--hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~F----------S~SGRlLfag 291 (343)
T KOG0286|consen 224 TFEG--HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAF----------SKSGRLLFAG 291 (343)
T ss_pred eecc--cccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEE----------cccccEEEee
Confidence 9977 99999999999999999999999999999999988888887543 346666666 4457899999
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
..|..+.+||.-+++...++.+ |...|.|+..+
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~G-----------------------------------------------HeNRvScl~~s 324 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLAG-----------------------------------------------HENRVSCLGVS 324 (343)
T ss_pred ecCCceeEeeccccceEEEeec-----------------------------------------------cCCeeEEEEEC
Confidence 9999999999998887777653 33479999999
Q ss_pred CCC-eEEEccCCCeEEEEe
Q 000410 1442 PGG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1442 p~g-~llTgg~Dg~IrlWD 1459 (1553)
||| .+.||++|..+|+|.
T Consensus 325 ~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 325 PDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCCcEEEecchhHheeecC
Confidence 999 566999999999994
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-25 Score=255.56 Aligned_cols=135 Identities=20% Similarity=0.196 Sum_probs=113.1
Q ss_pred cccCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-----CC---Ce
Q 000410 18 LHDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-----HP---HV 87 (1553)
Q Consensus 18 ~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-----hp---nI 87 (1553)
..|+....+|.+.++||-|.|++||+|.+.. +.||+||.+. .+.|.+.-..|+++|+++. |+ +|
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS------AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~V 144 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS------AQHYTEAALDEIKLLQQVREGDPNDPGKKCV 144 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh------hhHHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 3444444589999999999999999999975 5699999853 3566677777888888762 33 59
Q ss_pred eEEEEEEEe----CCEEEEEeccccCCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEe
Q 000410 88 WAFQFWQET----DKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVT 158 (1553)
Q Consensus 88 v~~~~~~~~----~~~~~lV~E~~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~ 158 (1553)
|++++.|.. ..+++||+|+++.+|..+|... ..++...++.|++|||.||.|||. .||||-||||||||+.
T Consensus 145 V~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 145 VQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 999999854 5689999999999999999654 349999999999999999999997 6999999999999994
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.5e-27 Score=247.78 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=187.4
Q ss_pred ccCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEE-EE
Q 000410 19 HDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQF-WQ 94 (1553)
Q Consensus 19 ~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~-~~ 94 (1553)
.++.+ .|.+.+.||.|.||++.+|+|++ ..+|+|.+.++. ...+.+.+|...--.| .|.||+.-|+ .|
T Consensus 20 v~l~d--~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~------tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 20 VDLED--VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ------TTQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred cchhh--hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch------hhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 44444 68889999999999999999986 559999987652 2234455554433233 5899998665 56
Q ss_pred EeCCEEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC--CcEEEeecCcc
Q 000410 95 ETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW--NWLYLSDFASF 171 (1553)
Q Consensus 95 ~~~~~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~--~~vkL~DFG~a 171 (1553)
++.+.+++++||++ |+|..-+...+ +.+...+.++.|+++||.|||++++||||||.+||||-.. .+|||||||..
T Consensus 92 qt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 92 QTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred hcCceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccc
Confidence 88889999999999 89999988766 8899999999999999999999999999999999999643 48999999988
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-------
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS------- 244 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~------- 244 (1553)
.+...... .......|.|||...... .......+.+|||.||+++|.+++|.+||...
T Consensus 171 ~k~g~tV~----------~~~~~~~y~~pe~~~~~~-----ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y 235 (378)
T KOG1345|consen 171 RKVGTTVK----------YLEYVNNYHAPELCDTVV-----NEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPY 235 (378)
T ss_pred cccCceeh----------hhhhhcccCCcHHHhhcc-----ccceEecccccchheeeeeeeeecCCCcchhhhccCchH
Confidence 76532211 111234599999775332 22345688999999999999999999999632
Q ss_pred -HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000410 245 -HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 289 (1553)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 289 (1553)
...++..+.....+......++.+..+.++-|..+|++|--..+.
T Consensus 236 ~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 236 WEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred HHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 234455554444444445567789999999999999999444333
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-26 Score=234.59 Aligned_cols=218 Identities=19% Similarity=0.173 Sum_probs=165.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHH-HhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRET-FRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~-l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+..-+..||+|++|.|-+.+|.. ...|+|.+...- ..++. +++..|..+ ++...+|.++.||+.+......++
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv---n~q~q-~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV---NSQEQ-KRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc---ChHHH-HHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 34456789999999999998853 568999886552 22333 344445454 444579999999999999999999
Q ss_pred EeccccCCHHHH----hcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 103 LRQYFFNSLRDR----LSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 103 V~E~~~gsL~d~----l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
.||.|..+|..+ +.+.+.++|.-+-+|+.-+++||.|||++ .|+|||+||.||||+.+|+||+||||.+......
T Consensus 123 cME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 123 CMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred eHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 999999887554 45667799999999999999999999985 8999999999999999999999999987654211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc--hHHHHHHhcCCC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL--SHLLAYRRGQYD 255 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~--~~~~~~~~~~~~ 255 (1553)
- .... ..|-..|||||++.... ....|+-++||||||+++.||.+++.||+. ....++++....
T Consensus 203 i------Akt~--daGCkpYmaPEri~~e~------n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 203 I------AKTM--DAGCKPYMAPERINPEL------NQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred h------HHHH--hcCCCccCChhhcCccc------CcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 1 1111 23446699999986432 234799999999999999999999999863 344445554444
Q ss_pred CCCCCC
Q 000410 256 PSQHLE 261 (1553)
Q Consensus 256 ~~~~~~ 261 (1553)
+.+.++
T Consensus 269 p~P~Lp 274 (282)
T KOG0984|consen 269 PSPQLP 274 (282)
T ss_pred CCCCCc
Confidence 444443
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=256.38 Aligned_cols=276 Identities=16% Similarity=0.225 Sum_probs=210.1
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
.|-..+||...++++++||||.++|||++||.|||||..++- +..|+..|++.|+.++|...++.++++|-||+
T Consensus 342 YVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf------C~vTFteHts~Vt~v~f~~~g~~llssSLDGt 415 (893)
T KOG0291|consen 342 YVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF------CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGT 415 (893)
T ss_pred eeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce------EEEEeccCCCceEEEEEEecCCEEEEeecCCe
Confidence 356678999999999999999999999999999999998875 67789999999999999999999999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCc-eEEEEeCCCCcccceeccCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNC-GIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg-~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
|+.||+.. | ...|.+.........|++.+|. |.++.+|+.|. .|.+|++.||+.+-.+.+ |
T Consensus 416 VRAwDlkR----------Y---rNfRTft~P~p~QfscvavD~s---GelV~AG~~d~F~IfvWS~qTGqllDiLsG--H 477 (893)
T KOG0291|consen 416 VRAWDLKR----------Y---RNFRTFTSPEPIQFSCVAVDPS---GELVCAGAQDSFEIFVWSVQTGQLLDILSG--H 477 (893)
T ss_pred EEeeeecc----------c---ceeeeecCCCceeeeEEEEcCC---CCEEEeeccceEEEEEEEeecCeeeehhcC--C
Confidence 99999962 1 2344455555556678888887 77888888887 599999999999999977 9
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~-~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~ 1368 (1553)
.|+|.+++|+|++..|++||.|.+|++||+-.. ..+..++.. ..+.. +.++|+|..++++.-||.|.
T Consensus 478 EgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~--sdvl~----------vsfrPdG~elaVaTldgqIt 545 (893)
T KOG0291|consen 478 EGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIR--SDVLA----------VSFRPDGKELAVATLDGQIT 545 (893)
T ss_pred CCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeec--cceeE----------EEEcCCCCeEEEEEecceEE
Confidence 999999999999999999999999999997432 122222221 12333 44566778999999999999
Q ss_pred EEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEE
Q 000410 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1447 (1553)
Q Consensus 1369 vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ll 1447 (1553)
+||++.+.....+.+...... .+...+.+. ..........+++++++|| .|+
T Consensus 546 f~d~~~~~q~~~IdgrkD~~~-----------------------gR~~~D~~t----a~~sa~~K~Ftti~ySaDG~~Il 598 (893)
T KOG0291|consen 546 FFDIKEAVQVGSIDGRKDLSG-----------------------GRKETDRIT----AENSAKGKTFTTICYSADGKCIL 598 (893)
T ss_pred EEEhhhceeeccccchhhccc-----------------------cccccceee----hhhcccCCceEEEEEcCCCCEEE
Confidence 999987654433332111000 000000000 0111223368999999999 677
Q ss_pred EccCCCeEEEEeCCCCCCceEE
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCI 1469 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~~ 1469 (1553)
+||..+.|+++|+.++-..+.+
T Consensus 599 AgG~sn~iCiY~v~~~vllkkf 620 (893)
T KOG0291|consen 599 AGGESNSICIYDVPEGVLLKKF 620 (893)
T ss_pred ecCCcccEEEEECchhheeeeE
Confidence 9999999999999876554433
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.4e-25 Score=239.08 Aligned_cols=262 Identities=21% Similarity=0.279 Sum_probs=216.0
Q ss_pred CCcc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcE
Q 000410 1123 SGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~ 1201 (1553)
..|+ ..|+|..++.||...|..++||+-+.|+.+|+.|+.||.||+...+ ....|.+|-..|.|++.+|.-+.
T Consensus 176 kIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk------vIR~YhGHlS~V~~L~lhPTldv 249 (460)
T KOG0285|consen 176 KIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK------VIRHYHGHLSGVYCLDLHPTLDV 249 (460)
T ss_pred EEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhh------hHHHhccccceeEEEecccccee
Confidence 4699 5699999999999999999999999999999999999999998765 45578999999999999999999
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
|++|+.|.+++|||+++.. ......+|...|..+.+.|. ...+++|+.|++|++||++.|+..
T Consensus 250 l~t~grDst~RvWDiRtr~--------------~V~~l~GH~~~V~~V~~~~~---dpqvit~S~D~tvrlWDl~agkt~ 312 (460)
T KOG0285|consen 250 LVTGGRDSTIRVWDIRTRA--------------SVHVLSGHTNPVASVMCQPT---DPQVITGSHDSTVRLWDLRAGKTM 312 (460)
T ss_pred EEecCCcceEEEeeecccc--------------eEEEecCCCCcceeEEeecC---CCceEEecCCceEEEeeeccCcee
Confidence 9999999999999998521 12233467778888888877 458999999999999999999999
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
.++.+ |...|.+++.+|....+++++.| .++.|++-.+..+..+.. +..-|+.+.. .. ...+++|
T Consensus 313 ~tlt~--hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsg-h~~iintl~~-ns----------D~v~~~G 377 (460)
T KOG0285|consen 313 ITLTH--HKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSG-HNAIINTLSV-NS----------DGVLVSG 377 (460)
T ss_pred Eeeec--ccceeeEEecCCchhhhhccCCc-cceeccCCccchhhcccc-ccceeeeeee-cc----------CceEEEc
Confidence 99987 88899999999999999999988 589999998888877543 5666777765 22 2368888
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.+|.+.+||.++|.+-+.+.....++. -....+|.+.+|.
T Consensus 378 ~dng~~~fwdwksg~nyQ~~~t~vqpGS---------------------------------------l~sEagI~as~fD 418 (460)
T KOG0285|consen 378 GDNGSIMFWDWKSGHNYQRGQTIVQPGS---------------------------------------LESEAGIFASCFD 418 (460)
T ss_pred CCceEEEEEecCcCcccccccccccCCc---------------------------------------cccccceeEEeec
Confidence 8899999999999977655532221110 1123489999998
Q ss_pred CCC-eEEEccCCCeEEEEeCC
Q 000410 1442 PGG-DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1442 p~g-~llTgg~Dg~IrlWDl~ 1461 (1553)
..| +|+||+.|.+|++|.-.
T Consensus 419 ktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 419 KTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ccCceEEeccCCcceEEEecc
Confidence 877 89999999999999854
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-23 Score=238.02 Aligned_cols=368 Identities=15% Similarity=0.138 Sum_probs=251.1
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D 1208 (1553)
-+...++.+|..=|+|+.|+|||.+|||+|.||++.|+|-.++++...+.. -.+|.+.|.++.|+|++..|+++|.|
T Consensus 180 FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~---~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 180 FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED---SDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred eeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC---CCCccccEEEEEECCCCceEEEecCC
Confidence 456678899999999999999999999999999999999999886544432 35799999999999999999999999
Q ss_pred CcEEEEEeeecccCCCccccccccccceecccC---CCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceec
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTK---EGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1209 G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
.+++|||+.+.+ .++.+... +...+-|+ |-.+ .|++.+-+|.|..++...+.....+.
T Consensus 257 kt~KIWdVs~~s-------------lv~t~~~~~~v~dqqvG~l-Wqkd-----~lItVSl~G~in~ln~~d~~~~~~i~ 317 (603)
T KOG0318|consen 257 KTIKIWDVSTNS-------------LVSTWPMGSTVEDQQVGCL-WQKD-----HLITVSLSGTINYLNPSDPSVLKVIS 317 (603)
T ss_pred ceEEEEEeeccc-------------eEEEeecCCchhceEEEEE-EeCC-----eEEEEEcCcEEEEecccCCChhheec
Confidence 999999997411 22222222 23345554 4443 89999999999999999999888887
Q ss_pred cCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCC
Q 000410 1286 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg 1365 (1553)
+ |...|+++..+|++.+|++|+.||.|.-||...+..-+-....|...|.++.. +.. ..+++.+.|.
T Consensus 318 G--HnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~-~~~----------~~~~t~g~Dd 384 (603)
T KOG0318|consen 318 G--HNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAA-SES----------GELFTIGWDD 384 (603)
T ss_pred c--cccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEee-cCC----------CcEEEEecCC
Confidence 6 99999999999999999999999999999999887765554556677888766 221 2488999999
Q ss_pred eEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccc--ccccc-ccccCCC--CCCccCcEEecc
Q 000410 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNV--NQKYR-VDELNEP--PPRLLGIRSLLP 1440 (1553)
Q Consensus 1366 ~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~-~~~l~~~--~~~~~~V~sl~~ 1440 (1553)
.+++.++..+.+...... .+.. +|.............. ..++. +...... ........++++
T Consensus 385 ~l~~~~~~~~~~t~~~~~----------~lg~---QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv 451 (603)
T KOG0318|consen 385 TLRVISLKDNGYTKSEVV----------KLGS---QPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAV 451 (603)
T ss_pred eEEEEecccCccccccee----------ecCC---CceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEE
Confidence 999999875443221100 0000 1111000000000000 00111 0111100 011224678899
Q ss_pred CCCC-eEEEccCCCeEEEEeCCCCCCceE-EeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcc-hhhhHHHHHhhhhc
Q 000410 1441 LPGG-DLLTGGTDLKIRRWDHCSPGRSYC-ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLT-SKLTAKAVLAAAAT 1517 (1553)
Q Consensus 1441 sp~g-~llTgg~Dg~IrlWDl~~~~~s~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~ 1517 (1553)
+|++ .++.||.|++|+++.+...+.... +.-. +.+..++...+.++..+......+... .+...+. ...
T Consensus 452 ~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~----h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~----~~~ 523 (603)
T KOG0318|consen 452 SPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLE----HRAAITDVAYSPDGAYLAAGDASRKVVLYDVASRE----VKT 523 (603)
T ss_pred cCCCCEEEEecccceEEEEEecCCcccceeeeec----ccCCceEEEECCCCcEEEEeccCCcEEEEEcccCc----eec
Confidence 9998 566999999999999987654222 2211 224556666666666555432221110 0000000 012
Q ss_pred CccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1518 DSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1518 ~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
....-|+..|++| +|+|+..++||||-|-.|.||.
T Consensus 524 ~~w~FHtakI~~~-aWsP~n~~vATGSlDt~Viiys 558 (603)
T KOG0318|consen 524 NRWAFHTAKINCV-AWSPNNKLVATGSLDTNVIIYS 558 (603)
T ss_pred ceeeeeeeeEEEE-EeCCCceEEEeccccceEEEEE
Confidence 2334599999999 7999999999999999999994
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.1e-25 Score=281.20 Aligned_cols=248 Identities=18% Similarity=0.231 Sum_probs=195.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~ 95 (1553)
+.++.+.||+|.||+|++|...+ ..||||.+..... ....+.+..|.++|+.+ .||||+.+.+++.
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~----~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS----SSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccC----cHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 34667799999999999997531 2499998865422 24455677788888888 5999999999998
Q ss_pred eCCEEEEEecccc-CCHHHHhcCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
.+...++|+||+. |+|.++++.+. .++..+...+++||+.|++||++.+++||||-..|||++
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT 452 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec
Confidence 8999999999999 89999997654 488999999999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCc--cccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRL--CYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 236 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~--~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 236 (1553)
.+..+||+|||+++...... .+......++. .|||||.+. ...|+.++||||+|++|||+++
T Consensus 453 ~~~~~kIaDFGlar~~~~~~------~y~~~~~~~~LP~kWmApEsl~----------~~~ft~kSDVWSfGI~L~Eifs 516 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKD------YYRTKSSAGTLPVKWMAPESLF----------DRVFTSKSDVWSFGILLWEIFT 516 (609)
T ss_pred CCCEEEEccccceeccCCCC------ceEecCCCCccceeecCHHHhc----------cCcccccchhhHHHHHHHHHhh
Confidence 99999999999998542111 11112222223 499999764 3578999999999999999998
Q ss_pred -CCCCCCc----hHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 237 -EVPFFEL----SHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 237 -g~~pf~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
|..||.. ..+.++.+..+.. ..+...++++.++++.||+.+|++||++.++.+.+..
T Consensus 517 LG~~PYp~~~~~~~l~~~l~~G~r~--~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 517 LGGTPYPGIPPTEELLEFLKEGNRM--EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred CCCCCCCCCCcHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 4888874 2333333332222 2344557899999999999999999999999987543
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4e-24 Score=221.92 Aligned_cols=249 Identities=18% Similarity=0.262 Sum_probs=202.1
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I 1211 (1553)
...|..|.++|..+.|+-||+|.+||+.|.|||+|+..++. ...+|.+|+..|.+++.+.+...|++|+.|..|
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~------liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v 83 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA------LIKTYSGHGHEVLDAALSSDNSKFASCGGDKAV 83 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccc------eeeeecCCCceeeeccccccccccccCCCCceE
Confidence 56788999999999999999999999999999999998876 567999999999999999999999999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC--cccceeccCCC
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN--SNTWTLKAIPE 1289 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~--~~~~~l~~~~h 1289 (1553)
.+||+.+.. ..|+ ...|...|+.+.|+.+ ..++++|+.|.++++||.|+. +.++.+.. .
T Consensus 84 ~vwDV~TGk-------------v~Rr-~rgH~aqVNtV~fNee---sSVv~SgsfD~s~r~wDCRS~s~ePiQilde--a 144 (307)
T KOG0316|consen 84 QVWDVNTGK-------------VDRR-FRGHLAQVNTVRFNEE---SSVVASGSFDSSVRLWDCRSRSFEPIQILDE--A 144 (307)
T ss_pred EEEEcccCe-------------eeee-cccccceeeEEEecCc---ceEEEeccccceeEEEEcccCCCCccchhhh--h
Confidence 999998521 2222 3367888999999988 569999999999999999976 45666654 5
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1369 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~v 1369 (1553)
.+.|.|+.+. +.-++.|+.||+++.||+|.+......- ..||+++++ +++ ++..++++-|+.+++
T Consensus 145 ~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~---g~pit~vs~-s~d---------~nc~La~~l~stlrL 209 (307)
T KOG0316|consen 145 KDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYF---GHPITSVSF-SKD---------GNCSLASSLDSTLRL 209 (307)
T ss_pred cCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhc---CCcceeEEe-cCC---------CCEEEEeeccceeee
Confidence 6779999886 4579999999999999999987765543 348888888 554 557889999999999
Q ss_pred EEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEEEc
Q 000410 1370 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTG 1449 (1553)
Q Consensus 1370 WDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~llTg 1449 (1553)
.|-++|+.++.+.++.. ..| .+.|..-..+..+++|
T Consensus 210 lDk~tGklL~sYkGhkn-------------------------------~ey-------------kldc~l~qsdthV~sg 245 (307)
T KOG0316|consen 210 LDKETGKLLKSYKGHKN-------------------------------MEY-------------KLDCCLNQSDTHVFSG 245 (307)
T ss_pred cccchhHHHHHhccccc-------------------------------cee-------------eeeeeecccceeEEec
Confidence 99999998877764432 011 1233332234478899
Q ss_pred cCCCeEEEEeCCCCC
Q 000410 1450 GTDLKIRRWDHCSPG 1464 (1553)
Q Consensus 1450 g~Dg~IrlWDl~~~~ 1464 (1553)
+.||.|.+||+.+..
T Consensus 246 SEDG~Vy~wdLvd~~ 260 (307)
T KOG0316|consen 246 SEDGKVYFWDLVDET 260 (307)
T ss_pred cCCceEEEEEeccce
Confidence 999999999997643
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.9e-24 Score=224.62 Aligned_cols=255 Identities=17% Similarity=0.223 Sum_probs=200.5
Q ss_pred cEeeec-cccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC
Q 000410 1130 ILVAHL-QEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1130 ~lv~~l-~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D 1208 (1553)
.+..+| .+|+.+|.+++|+|.|++||+||.|.|+-||.-..++ +.+..++.+|...|.|++|+++|++||+||.|
T Consensus 51 ~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~e----fecv~~lEGHEnEVK~Vaws~sG~~LATCSRD 126 (312)
T KOG0645|consen 51 TCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGE----FECVATLEGHENEVKCVAWSASGNYLATCSRD 126 (312)
T ss_pred EEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCc----eeEEeeeeccccceeEEEEcCCCCEEEEeeCC
Confidence 466666 4799999999999999999999999999999866543 55777899999999999999999999999999
Q ss_pred CcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC---cccceec
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN---SNTWTLK 1285 (1553)
Q Consensus 1209 G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~---~~~~~l~ 1285 (1553)
.+|.||.++. . ..-.+......|..-|..+.|||. ..+|++++.|++|++|+-..+ .+..++.
T Consensus 127 KSVWiWe~de-d----------dEfec~aVL~~HtqDVK~V~WHPt---~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~ 192 (312)
T KOG0645|consen 127 KSVWIWEIDE-D----------DEFECIAVLQEHTQDVKHVIWHPT---EDLLFSCSYDNTIKVYRDEDDDDWECVQTLD 192 (312)
T ss_pred CeEEEEEecC-C----------CcEEEEeeeccccccccEEEEcCC---cceeEEeccCCeEEEEeecCCCCeeEEEEec
Confidence 9999999972 1 111233344567777888999997 569999999999999987732 4567776
Q ss_pred cCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCC
Q 000410 1286 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg 1365 (1553)
+ |.+.|.+++|++.|..|++++.|+++++|-++ ..+...+..++..+.|. . ..|+++++|+
T Consensus 193 g--~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~-----~~~~~~~sr~~Y~v~W~--~----------~~IaS~ggD~ 253 (312)
T KOG0645|consen 193 G--HENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY-----TDLSGMHSRALYDVPWD--N----------GVIASGGGDD 253 (312)
T ss_pred C--ccceEEEEEecCCCceEEEecCCcceEeeeec-----cCcchhcccceEeeeec--c----------cceEeccCCC
Confidence 5 88899999999999999999999999999876 34555566778888772 1 2689999999
Q ss_pred eEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC--C
Q 000410 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP--G 1443 (1553)
Q Consensus 1366 ~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp--~ 1443 (1553)
.|+++.-..+ +.++..+. ..+....|...|+++.|.| .
T Consensus 254 ~i~lf~~s~~-----------~d~p~~~l-----------------------------~~~~~~aHe~dVNsV~w~p~~~ 293 (312)
T KOG0645|consen 254 AIRLFKESDS-----------PDEPSWNL-----------------------------LAKKEGAHEVDVNSVQWNPKVS 293 (312)
T ss_pred EEEEEEecCC-----------CCCchHHH-----------------------------HHhhhcccccccceEEEcCCCC
Confidence 9999875521 00110000 0011234555899999999 4
Q ss_pred CeEEEccCCCeEEEEeCC
Q 000410 1444 GDLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1444 g~llTgg~Dg~IrlWDl~ 1461 (1553)
++|++||+||.|++|.+.
T Consensus 294 ~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 294 NRLASGGDDGIVNFWELE 311 (312)
T ss_pred CceeecCCCceEEEEEec
Confidence 589999999999999874
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.8e-24 Score=236.13 Aligned_cols=254 Identities=18% Similarity=0.274 Sum_probs=217.8
Q ss_pred Ccc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEE
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~l 1202 (1553)
-|+ -.|++++.|+||.++|..|+|+..|+++||||.|-.+++||..+. +++.....+|...|.+++|.|.|+++
T Consensus 134 v~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~-----~~c~ks~~gh~h~vS~V~f~P~gd~i 208 (406)
T KOG0295|consen 134 VFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF-----FRCIKSLIGHEHGVSSVFFLPLGDHI 208 (406)
T ss_pred EEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH-----HHHHHHhcCcccceeeEEEEecCCee
Confidence 577 569999999999999999999999999999999999999998753 24556677888889999999999999
Q ss_pred EEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 as~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
++|+.|.+|+.|++++. -.......|...|.++..+.+ |.+++++++|.+|++|-+.+++|..
T Consensus 209 lS~srD~tik~We~~tg--------------~cv~t~~~h~ewvr~v~v~~D---Gti~As~s~dqtl~vW~~~t~~~k~ 271 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTG--------------YCVKTFPGHSEWVRMVRVNQD---GTIIASCSNDQTLRVWVVATKQCKA 271 (406)
T ss_pred eecccccceeEEecccc--------------eeEEeccCchHhEEEEEecCC---eeEEEecCCCceEEEEEeccchhhh
Confidence 99999999999999841 122334466778999888888 8899999999999999999999988
Q ss_pred eeccCCCCcceEEEEEcCC----------C-----CEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCC
Q 000410 1283 TLKAIPEEGYVSSLVTGPC----------G-----NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPN 1347 (1553)
Q Consensus 1283 ~l~~~~h~g~Itsl~~sp~----------g-----~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~ 1347 (1553)
.+.. |..+|-|++|.|. + .++.+|+.|++|++||+.++.++-++.. |...|..+.+ +|.
T Consensus 272 ~lR~--hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g-hdnwVr~~af-~p~-- 345 (406)
T KOG0295|consen 272 ELRE--HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG-HDNWVRGVAF-SPG-- 345 (406)
T ss_pred hhhc--cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec-ccceeeeeEE-cCC--
Confidence 8877 7888999999663 2 4899999999999999999999998876 6778888877 554
Q ss_pred CccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCC
Q 000410 1348 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1427 (1553)
Q Consensus 1348 ~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 1427 (1553)
|++++++..|+++++||+.+++|..++..
T Consensus 346 -------Gkyi~ScaDDktlrvwdl~~~~cmk~~~a-------------------------------------------- 374 (406)
T KOG0295|consen 346 -------GKYILSCADDKTLRVWDLKNLQCMKTLEA-------------------------------------------- 374 (406)
T ss_pred -------CeEEEEEecCCcEEEEEeccceeeeccCC--------------------------------------------
Confidence 56999999999999999999999887652
Q ss_pred CCCCccCcEEeccCCCC-eEEEccCCCeEEEEe
Q 000410 1428 PPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1428 ~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWD 1459 (1553)
|...|+++.|+.+. +++||+-|.++++|.
T Consensus 375 ---h~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 375 ---HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred ---CcceeEEEecCCCCceEEeccccceeeeee
Confidence 23368899987665 788999999999996
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=231.94 Aligned_cols=282 Identities=18% Similarity=0.234 Sum_probs=217.3
Q ss_pred cccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC---cEEEEEeCCCcEEEE
Q 000410 1138 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS---AQVVVGACDGIIHMF 1214 (1553)
Q Consensus 1138 H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~---~~las~s~DG~I~vw 1214 (1553)
|.+.|.++... +++++||+.||+++|||.... +..++.+|+++|.+++|.-.. ..|++||.|.++++|
T Consensus 104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk-------~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw 174 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGK-------SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLW 174 (423)
T ss_pred chhhhhhhccc--CceEEEeecCCeeEEEecCCc-------eEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEE
Confidence 88889999887 789999999999999998642 567899999999988886432 359999999999999
Q ss_pred EeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCC-----------------
Q 000410 1215 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS----------------- 1277 (1553)
Q Consensus 1215 di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt----------------- 1277 (1553)
.++... ..... .....+|...|.++...++ +..+++|+.|.+|.+|+..+
T Consensus 175 ~~~~~~---------~~~~~-~~~~~GHk~~V~sVsv~~s---gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~ 241 (423)
T KOG0313|consen 175 KWNVGE---------NKVKA-LKVCRGHKRSVDSVSVDSS---GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQ 241 (423)
T ss_pred EecCch---------hhhhH-HhHhcccccceeEEEecCC---CCeEEeecccceeeecccCCCccccccccchhhhhhh
Confidence 997311 01111 1112278888999988887 77999999999999999321
Q ss_pred --------CcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCc
Q 000410 1278 --------NSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA 1349 (1553)
Q Consensus 1278 --------~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~ 1349 (1553)
+..+-++. +|.++|.++.|++ ...+++++.|.+|+.||+.++..+..... ..++.++.. +|.
T Consensus 242 ~~~~~~~~r~P~vtl~--GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~--~ksl~~i~~-~~~---- 311 (423)
T KOG0313|consen 242 KREKEGGTRTPLVTLE--GHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT--NKSLNCISY-SPL---- 311 (423)
T ss_pred hhhhcccccCceEEec--ccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec--CcceeEeec-ccc----
Confidence 11223344 4999999999998 67899999999999999999988877654 345677766 543
Q ss_pred cccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCC
Q 000410 1350 VSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1429 (1553)
Q Consensus 1350 ~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1429 (1553)
..++++|+.|..+++||-+++.-..+-. ...
T Consensus 312 -----~~Ll~~gssdr~irl~DPR~~~gs~v~~--------------------------------------------s~~ 342 (423)
T KOG0313|consen 312 -----SKLLASGSSDRHIRLWDPRTGDGSVVSQ--------------------------------------------SLI 342 (423)
T ss_pred -----cceeeecCCCCceeecCCCCCCCceeEE--------------------------------------------eee
Confidence 4589999999999999998774221111 013
Q ss_pred CCccCcEEeccCCCC--eEEEccCCCeEEEEeCCCCC-CceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhh
Q 000410 1430 PRLLGIRSLLPLPGG--DLLTGGTDLKIRRWDHCSPG-RSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKL 1506 (1553)
Q Consensus 1430 ~~~~~V~sl~~sp~g--~llTgg~Dg~IrlWDl~~~~-~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 1506 (1553)
+|...|.++.|+|.. .+++|+.|+++++||+++.+ ..+.+.
T Consensus 343 gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~------------------------------------ 386 (423)
T KOG0313|consen 343 GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA------------------------------------ 386 (423)
T ss_pred cchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec------------------------------------
Confidence 455689999999977 57799999999999998776 333222
Q ss_pred hHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1507 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1507 ~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+|.|.|.++ .|+ .+..|||||.|..|+|++
T Consensus 387 ---------------~h~DKvl~v-dW~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 387 ---------------GHNDKVLSV-DWN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred ---------------cCCceEEEE-ecc-CCceEEeccCcceEEEec
Confidence 299999999 564 356899999999999985
|
|
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.4e-25 Score=238.01 Aligned_cols=263 Identities=18% Similarity=0.191 Sum_probs=210.3
Q ss_pred CCCcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1122 DSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1122 ~~~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
-+.|+-. -.++..|.||+++|.|+.| |.+.++|||.|.||+|||+++++ +..++-+|...|..+.|+. .
T Consensus 219 ikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge------~l~tlihHceaVLhlrf~n--g 288 (499)
T KOG0281|consen 219 IKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGE------PLNTLIHHCEAVLHLRFSN--G 288 (499)
T ss_pred eEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCc------hhhHHhhhcceeEEEEEeC--C
Confidence 3578844 4678999999999999999 46799999999999999999987 5667888998999999964 5
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.++++|.|.+|.|||+... ....++....+|.+.|+++.|+.. ++++++.|.+|++||+.|+++
T Consensus 289 ~mvtcSkDrsiaVWdm~sp-----------s~it~rrVLvGHrAaVNvVdfd~k-----yIVsASgDRTikvW~~st~ef 352 (499)
T KOG0281|consen 289 YMVTCSKDRSIAVWDMASP-----------TDITLRRVLVGHRAAVNVVDFDDK-----YIVSASGDRTIKVWSTSTCEF 352 (499)
T ss_pred EEEEecCCceeEEEeccCc-----------hHHHHHHHHhhhhhheeeeccccc-----eEEEecCCceEEEEeccceee
Confidence 8999999999999999731 123566677789999999988754 999999999999999999999
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEE
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1360 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s 1360 (1553)
+.++.+ |...|-|+.+ .|+.+++|++|.+|++||+..+.+++.++. |..-|.++.| +.+.+++
T Consensus 353 vRtl~g--HkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeG-HEeLvRciRF------------d~krIVS 415 (499)
T KOG0281|consen 353 VRTLNG--HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF------------DNKRIVS 415 (499)
T ss_pred ehhhhc--ccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhc-hHHhhhheee------------cCceeee
Confidence 999976 8888988887 478999999999999999999999999886 5667888888 3457999
Q ss_pred EEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEecc
Q 000410 1361 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1440 (1553)
Q Consensus 1361 ~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1440 (1553)
|+.||.|+|||+.++.-..... +.+-+..+ ..|.+.|..+.|
T Consensus 416 GaYDGkikvWdl~aaldpra~~-----------------------------------~~~Cl~~l---v~hsgRVFrLQF 457 (499)
T KOG0281|consen 416 GAYDGKIKVWDLQAALDPRAPA-----------------------------------STLCLRTL---VEHSGRVFRLQF 457 (499)
T ss_pred ccccceEEEEecccccCCcccc-----------------------------------cchHHHhh---hhccceeEEEee
Confidence 9999999999998664211110 00001111 112234666666
Q ss_pred CCCCeEEEccCCCeEEEEeCCCCCCc
Q 000410 1441 LPGGDLLTGGTDLKIRRWDHCSPGRS 1466 (1553)
Q Consensus 1441 sp~g~llTgg~Dg~IrlWDl~~~~~s 1466 (1553)
. +-.|++++-|.+|-+||+.++-.+
T Consensus 458 D-~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 458 D-EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred c-ceEEEeccCCCeEEEEEcCCCCcc
Confidence 2 337899999999999999877555
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=8e-24 Score=223.69 Aligned_cols=296 Identities=18% Similarity=0.270 Sum_probs=221.7
Q ss_pred eccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEE
Q 000410 1134 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHM 1213 (1553)
Q Consensus 1134 ~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~v 1213 (1553)
-|+||..+++.|.++.+|.+|.||+.|.+..||-...++ ..-+|.+|.+.|+|+...-+.+.+++|+.|.++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe------rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE------RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCc------eeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence 368999999999999999999999999999999988777 34489999999999999999999999999999999
Q ss_pred EEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCC-----ceEEEEeCCCC-------ccc
Q 000410 1214 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN-----CGIHLWDTRSN-------SNT 1281 (1553)
Q Consensus 1214 wdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~d-----g~I~iwDlrt~-------~~~ 1281 (1553)
||+.+.. .+ .....+.+|..+.|+.+ ++++++++.+ +.|.++|+|.. ++.
T Consensus 79 WDv~tGk-------------~l--a~~k~~~~Vk~~~F~~~---gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~ 140 (327)
T KOG0643|consen 79 WDVETGK-------------QL--ATWKTNSPVKRVDFSFG---GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPY 140 (327)
T ss_pred EEcCCCc-------------EE--EEeecCCeeEEEeeccC---CcEEEEEehhhcCcceEEEEEEccCChhhhcccCce
Confidence 9998521 11 22245678899999998 6677776654 57999999943 333
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
..+.. +...+++..|+|.+.++++|..+|.|..||++++..+..-...|...|+.+++ ++ ++.+++++
T Consensus 141 ~kI~t--~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~-s~---------d~T~FiT~ 208 (327)
T KOG0643|consen 141 LKIPT--PDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQF-SR---------DRTYFITG 208 (327)
T ss_pred EEecC--CccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccc-cC---------CcceEEec
Confidence 34433 56889999999999999999999999999999976554444446668888887 44 45699999
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.|...++||+.+.++++++.... +|++.+++
T Consensus 209 s~Dttakl~D~~tl~v~Kty~te~------------------------------------------------PvN~aais 240 (327)
T KOG0643|consen 209 SKDTTAKLVDVRTLEVLKTYTTER------------------------------------------------PVNTAAIS 240 (327)
T ss_pred ccCccceeeeccceeeEEEeeecc------------------------------------------------cccceecc
Confidence 999999999999999999987321 46777777
Q ss_pred CCC-eEE-EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCc
Q 000410 1442 PGG-DLL-TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDS 1519 (1553)
Q Consensus 1442 p~g-~ll-Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1519 (1553)
|.. .++ -||.+-+ |+.+- ++. .+.=..-|| ...-..-...
T Consensus 241 P~~d~VilgGGqeA~----dVTTT------~~r--~GKFEArFy--------------------------h~i~eEEigr 282 (327)
T KOG0643|consen 241 PLLDHVILGGGQEAM----DVTTT------STR--AGKFEARFY--------------------------HLIFEEEIGR 282 (327)
T ss_pred cccceEEecCCceee----eeeee------ccc--ccchhhhHH--------------------------HHHHHHHhcc
Confidence 744 444 4443322 11100 000 000000011 0011112235
Q ss_pred cCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1520 AGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1520 ~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
.++|-++|++| +|+|+|+..+||+.||.|+|.
T Consensus 283 vkGHFGPINsv-AfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 283 VKGHFGPINSV-AFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred ccccccCccee-EECCCCcccccCCCCceEEEE
Confidence 67899999999 699999999999999999973
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9e-24 Score=244.61 Aligned_cols=250 Identities=16% Similarity=0.265 Sum_probs=211.8
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
..+..|++.|.++.++|...+++++-..|.|.|||.++.. -...++-..-+|.+..|.+.-+.+++|++|+.|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt------mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT------MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIR 80 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccce------eeeeeeecccchhhheeeeccceEEEecCCceEE
Confidence 4566799999999999999999999999999999998765 2224445566799999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC-cccceeccCCCCc
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN-SNTWTLKAIPEEG 1291 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~-~~~~~l~~~~h~g 1291 (1553)
||+.++.. ..+....|..-+.+++.||. ..++++++.|-+|++||-..+ .+.+++++ |..
T Consensus 81 Vfnynt~e--------------kV~~FeAH~DyIR~iavHPt---~P~vLtsSDDm~iKlW~we~~wa~~qtfeG--H~H 141 (794)
T KOG0276|consen 81 VFNYNTGE--------------KVKTFEAHSDYIRSIAVHPT---LPYVLTSSDDMTIKLWDWENEWACEQTFEG--HEH 141 (794)
T ss_pred EEecccce--------------eeEEeeccccceeeeeecCC---CCeEEecCCccEEEEeeccCceeeeeEEcC--cce
Confidence 99997421 12234467888999999998 679999999999999999865 57778877 888
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000410 1292 YVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1292 ~Itsl~~sp-~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vW 1370 (1553)
.|.+++|.| |.+.+++|+-|++|++|.+....+..+++. |...|++++++ +.+ +.+++++|+.|..|+||
T Consensus 142 yVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~g-HekGVN~Vdyy-~~g-------dkpylIsgaDD~tiKvW 212 (794)
T KOG0276|consen 142 YVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEG-HEKGVNCVDYY-TGG-------DKPYLISGADDLTIKVW 212 (794)
T ss_pred EEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeec-cccCcceEEec-cCC-------CcceEEecCCCceEEEe
Confidence 999999999 568999999999999999999999999984 78899999994 333 46899999999999999
Q ss_pred EcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEc
Q 000410 1371 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTG 1449 (1553)
Q Consensus 1371 Dl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTg 1449 (1553)
|..+.+|++++.++ ...|.++.|+|.- .++||
T Consensus 213 DyQtk~CV~TLeGH-----------------------------------------------t~Nvs~v~fhp~lpiiisg 245 (794)
T KOG0276|consen 213 DYQTKSCVQTLEGH-----------------------------------------------TNNVSFVFFHPELPIIISG 245 (794)
T ss_pred ecchHHHHHHhhcc-----------------------------------------------cccceEEEecCCCcEEEEe
Confidence 99999998888633 2368899999976 67799
Q ss_pred cCCCeEEEEeCCCC
Q 000410 1450 GTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1450 g~Dg~IrlWDl~~~ 1463 (1553)
+.||++|+|+-.+-
T Consensus 246 sEDGTvriWhs~Ty 259 (794)
T KOG0276|consen 246 SEDGTVRIWNSKTY 259 (794)
T ss_pred cCCccEEEecCcce
Confidence 99999999996643
|
|
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=236.95 Aligned_cols=283 Identities=19% Similarity=0.306 Sum_probs=215.4
Q ss_pred EeeeccccccCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCC
Q 000410 1131 LVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1209 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~-~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG 1209 (1553)
.|+.|.||.+.|.+++=+|.. ..++|||.||.|+|||+...+ +..++.+|.+.|..+++.. ..++++|+|.
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~------~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDK 129 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE------CIRTFKAHEGLVRGICVTQ--TSFFTVGDDK 129 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhh------hhheeecccCceeeEEecc--cceEEecCCc
Confidence 688999999999999999976 789999999999999998765 6678899999999998865 7899999999
Q ss_pred cEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
+|+.|.++. . ....+ .....+..+.-+.. ++.+++|+. .|.+||..-...+.++.. .
T Consensus 130 tvK~wk~~~------~--------p~~ti--lg~s~~~gIdh~~~---~~~FaTcGe--~i~IWD~~R~~Pv~smsw--G 186 (433)
T KOG0268|consen 130 TVKQWKIDG------P--------PLHTI--LGKSVYLGIDHHRK---NSVFATCGE--QIDIWDEQRDNPVSSMSW--G 186 (433)
T ss_pred ceeeeeccC------C--------cceee--eccccccccccccc---cccccccCc--eeeecccccCCccceeec--C
Confidence 999999872 0 11111 11223333333332 336666655 589999998888888875 5
Q ss_pred CcceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000410 1290 EGYVSSLVTGPCG-NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g-~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~ 1368 (1553)
.+.|.|+.|+|.. ..|++|.+|+.|.++|+|...+++..... -.-+.++| .|. +..+++|+.|..+.
T Consensus 187 ~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~--mRTN~Isw-nPe---------afnF~~a~ED~nlY 254 (433)
T KOG0268|consen 187 ADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT--MRTNTICW-NPE---------AFNFVAANEDHNLY 254 (433)
T ss_pred CCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeee--ccccceec-Ccc---------ccceeeccccccce
Confidence 6679999999966 56777889999999999999999877653 24567778 662 23577888899999
Q ss_pred EEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEE
Q 000410 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1447 (1553)
Q Consensus 1369 vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ll 1447 (1553)
.+|++..+. | +....+|...|.++.|+|.| .++
T Consensus 255 ~~DmR~l~~------------------------p----------------------~~v~~dhvsAV~dVdfsptG~Efv 288 (433)
T KOG0268|consen 255 TYDMRNLSR------------------------P----------------------LNVHKDHVSAVMDVDFSPTGQEFV 288 (433)
T ss_pred ehhhhhhcc------------------------c----------------------chhhcccceeEEEeccCCCcchhc
Confidence 999985431 1 11124566789999999999 799
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccce
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1527 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1527 (1553)
|||.|++||++....+.. +..|. .+ -...|
T Consensus 289 sgsyDksIRIf~~~~~~S--------------RdiYh-----------------------tk-------------RMq~V 318 (433)
T KOG0268|consen 289 SGSYDKSIRIFPVNHGHS--------------RDIYH-----------------------TK-------------RMQHV 318 (433)
T ss_pred cccccceEEEeecCCCcc--------------hhhhh-----------------------Hh-------------hhhee
Confidence 999999999999874321 11110 00 12458
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1528 LSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1528 ~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.+| .|+.+.++|+|||+||.|++||
T Consensus 319 ~~V-k~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 319 FCV-KYSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred eEE-EEeccccEEEecCCCcceeeee
Confidence 888 6999999999999999999997
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=253.38 Aligned_cols=263 Identities=13% Similarity=0.180 Sum_probs=214.8
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC-cEEEEEeC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS-AQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~-~~las~s~ 1207 (1553)
|.--..+.||++.|.++.+..+|.+|+|||.|.+|++|-++... ....+...+.+|.+.|.+++++..+ ..||++|.
T Consensus 355 ~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~--~~~~~~a~~~gH~~svgava~~~~~asffvsvS~ 432 (775)
T KOG0319|consen 355 TSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNC--SKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQ 432 (775)
T ss_pred CCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCc--chhhhhhhhcccccccceeeecccCccEEEEecC
Confidence 43344789999999999977788999999999999999873322 1223556788999999999997755 57899999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|+++++|++.. +.. ......-..+.....|+.-|++++.+|+ ..++++|+.|.+.++|++...+...+|.+
T Consensus 433 D~tlK~W~l~~-s~~----~~~~~~~~~~~t~~aHdKdIN~Vaia~n---dkLiAT~SqDktaKiW~le~~~l~~vLsG- 503 (775)
T KOG0319|consen 433 DCTLKLWDLPK-SKE----TAFPIVLTCRYTERAHDKDINCVAIAPN---DKLIATGSQDKTAKIWDLEQLRLLGVLSG- 503 (775)
T ss_pred CceEEEecCCC-ccc----ccccceehhhHHHHhhcccccceEecCC---CceEEecccccceeeecccCceEEEEeeC-
Confidence 99999999973 111 1111111122233457788999999999 67999999999999999998888899987
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
|...|.|+.|+|..+.++++|.|++|++|.+.++.|++++.. |.+.|-+..|. .++..+++++.||.+
T Consensus 504 -H~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eG-H~~aVlra~F~----------~~~~qliS~~adGli 571 (775)
T KOG0319|consen 504 -HTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEG-HTSAVLRASFI----------RNGKQLISAGADGLI 571 (775)
T ss_pred -CccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecC-ccceeEeeeee----------eCCcEEEeccCCCcE
Confidence 999999999999999999999999999999999999999986 67778887772 245689999999999
Q ss_pred EEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eE
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DL 1446 (1553)
Q Consensus 1368 ~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~l 1446 (1553)
++|++.+++|...+..++. .|++++.++.+ .+
T Consensus 572 KlWnikt~eC~~tlD~H~D-----------------------------------------------rvWaL~~~~~~~~~ 604 (775)
T KOG0319|consen 572 KLWNIKTNECEMTLDAHND-----------------------------------------------RVWALSVSPLLDMF 604 (775)
T ss_pred EEEeccchhhhhhhhhccc-----------------------------------------------eeEEEeecCcccee
Confidence 9999999999888764432 68999998877 67
Q ss_pred EEccCCCeEEEEeCC
Q 000410 1447 LTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1447 lTgg~Dg~IrlWDl~ 1461 (1553)
+|||.||+|.+|.=.
T Consensus 605 ~tgg~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 605 VTGGGDGRIIFWKDV 619 (775)
T ss_pred EecCCCeEEEEeecC
Confidence 799999999999743
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=259.56 Aligned_cols=262 Identities=23% Similarity=0.380 Sum_probs=208.2
Q ss_pred Cccc-Ccc--EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1124 GWRP-RGI--LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1124 ~W~p-~G~--lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
.|.. .+. +...+.+|...|++++|+||++++++|+.|+++||||+.... +...++.+|...|+|++|+|.++
T Consensus 185 ~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~-----~~~~~l~gH~~~v~~~~f~p~g~ 259 (456)
T KOG0266|consen 185 IWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG-----RNLKTLKGHSTYVTSVAFSPDGN 259 (456)
T ss_pred EeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC-----eEEEEecCCCCceEEEEecCCCC
Confidence 4654 344 778889999999999999999999999999999999994332 25668889999999999999999
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc-
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS- 1279 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~- 1279 (1553)
.+++|+.|++|+|||+.+. .+......|...|..++|+++ +..|++++.|+.|++||+.++.
T Consensus 260 ~i~Sgs~D~tvriWd~~~~--------------~~~~~l~~hs~~is~~~f~~d---~~~l~s~s~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 260 LLVSGSDDGTVRIWDVRTG--------------ECVRKLKGHSDGISGLAFSPD---GNLLVSASYDGTIRVWDLETGSK 322 (456)
T ss_pred EEEEecCCCcEEEEeccCC--------------eEEEeeeccCCceEEEEECCC---CCEEEEcCCCccEEEEECCCCce
Confidence 9999999999999999741 222333456778899999999 7799999999999999999999
Q ss_pred -ccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEE
Q 000410 1280 -NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1280 -~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l 1358 (1553)
+...+....+..++++++|+|++.++++++.|+.+++||++....+..+...... + .+++.+.. .+.+.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~-~--~~~~~~~~-----~~~~~~i 394 (456)
T KOG0266|consen 323 LCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL-V--RCIFSPTL-----STGGKLI 394 (456)
T ss_pred eeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc-c--eeEecccc-----cCCCCeE
Confidence 5566654222226999999999999999999999999999999999888765443 2 23323222 4568899
Q ss_pred EEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEe
Q 000410 1359 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438 (1553)
Q Consensus 1359 ~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1438 (1553)
++|+.|+.|.+||+.++..++.+..+. ...+..+
T Consensus 395 ~sg~~d~~v~~~~~~s~~~~~~l~~h~----------------------------------------------~~~~~~~ 428 (456)
T KOG0266|consen 395 YSGSEDGSVYVWDSSSGGILQRLEGHS----------------------------------------------KAAVSDL 428 (456)
T ss_pred EEEeCCceEEEEeCCccchhhhhcCCC----------------------------------------------CCceecc
Confidence 999999999999999876544443210 2357888
Q ss_pred ccCCCC-eEEEcc--CCCeEEEEeCC
Q 000410 1439 LPLPGG-DLLTGG--TDLKIRRWDHC 1461 (1553)
Q Consensus 1439 ~~sp~g-~llTgg--~Dg~IrlWDl~ 1461 (1553)
.+++.. .+++++ .|+.|++|...
T Consensus 429 ~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 429 SSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ccCCCcCeeeecCcCCCceEEEecCC
Confidence 888877 455666 79999999754
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=233.57 Aligned_cols=209 Identities=27% Similarity=0.353 Sum_probs=177.5
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|.+|.||++... +..+++|++...... .....+.+|...++.+.|++|+++++++......++++||++ +
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSS----SLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccch----hHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCC
Confidence 689999999999997 577999999654211 134668888899999999999999999999899999999999 6
Q ss_pred CHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCCCCCCCCccee
Q 000410 110 SLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 110 sL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
+|.+++... ..++...+..++.|++.+|++||++|++|+||+|.||+++. .+.++|+|||.+........ .
T Consensus 77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------h
Confidence 999999775 46899999999999999999999999999999999999999 89999999998875532211 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....+...|++||.+... ...+.+.|+|++|+++++| ..
T Consensus 150 ~~~~~~~~~~~~pe~~~~~---------~~~~~~~D~~~lg~~~~~l-------------------------------~~ 189 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGK---------GYYSEKSDIWSLGVILYEL-------------------------------PE 189 (215)
T ss_pred hhcccCCCCccChhHhccc---------CCCCchhhhHHHHHHHHHH-------------------------------HH
Confidence 1223356679999976421 2567889999999999998 57
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 268 IRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+++.+|++.||++||++++++++
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhC
Confidence 9999999999999999999999976
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-26 Score=265.85 Aligned_cols=248 Identities=21% Similarity=0.204 Sum_probs=201.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+...+|+|.||.||+|++.. ...|+|+++.... .+ ..-++.|+-+++.++||||+.|++.|..+..+++.
T Consensus 16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~-dd----~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG-DD----FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred chhheeeecCCcccchhhhcccccCchhhheeeeccCC-cc----ccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 89999999999999999999864 6799999976521 11 23355566788899999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||||+ |+|.|.-.-.+.+++.++....+..+.||+|||++|-+|||||-.|||+++.|.+||+|||.+..+....
T Consensus 91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati---- 166 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI---- 166 (829)
T ss_pred EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh----
Confidence 99999 6999988878889999999999999999999999999999999999999999999999999875442211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCC-CCCCchHHHHH---HhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-PFFELSHLLAY---RRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~-~pf~~~~~~~~---~~~~~~~~~ 258 (1553)
.......||++|||||+-. +...+.|...+|||++|+...|+---+ |.|+...+... .+..+.+..
T Consensus 167 ---~KrksfiGtpywmapEvaa-------verkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~ 236 (829)
T KOG0576|consen 167 ---AKRKSFIGTPYWMAPEVAA-------VERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPT 236 (829)
T ss_pred ---hhhhcccCCccccchhHHH-------HHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCc
Confidence 1223456899999999753 455678999999999999999987764 45665554332 334444332
Q ss_pred -CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 -HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 -~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.-....++.+.+|++.+|.++|++||+++.+|.|
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 2222446789999999999999999999999987
|
|
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-23 Score=243.98 Aligned_cols=282 Identities=21% Similarity=0.346 Sum_probs=227.4
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
-.+.||+..|.++++|.|+..++||+. +.++||+..++. +..+..+ +.+.|..|.|+++++++|...|.+.
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~k------ciRTi~~--~y~l~~~Fvpgd~~Iv~G~k~Gel~ 437 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLK------CIRTITC--GYILASKFVPGDRYIVLGTKNGELQ 437 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcc------eeEEecc--ccEEEEEecCCCceEEEeccCCceE
Confidence 356799999999999999888888765 789999999876 3334433 3699999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc-----c-------
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS-----N------- 1280 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~-----~------- 1280 (1553)
+||+... .+......|...+..++..|+ +..+++|+.|.+|++||..-.. .
T Consensus 438 vfdlaS~--------------~l~Eti~AHdgaIWsi~~~pD---~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~ 500 (888)
T KOG0306|consen 438 VFDLASA--------------SLVETIRAHDGAIWSISLSPD---NKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLK 500 (888)
T ss_pred EEEeehh--------------hhhhhhhccccceeeeeecCC---CCceEEecCCcEEEEEeEEEEeccCcccceeeeec
Confidence 9999731 111222367788899999999 7799999999999999985321 1
Q ss_pred -cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1281 -TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1281 -~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
..+++. ...|.|+.+||||++|++|--|.++++|-+.+.+-.-++- +|.-||.++.. +|+ +.+++
T Consensus 501 ~~rtLel---~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLY-GHkLPV~smDI-S~D---------Skliv 566 (888)
T KOG0306|consen 501 HTRTLEL---EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLY-GHKLPVLSMDI-SPD---------SKLIV 566 (888)
T ss_pred cceEEec---cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeec-ccccceeEEec-cCC---------cCeEE
Confidence 123332 4579999999999999999999999999888766655554 47789999988 554 56999
Q ss_pred EEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1360 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
+||.|..|+||-+.-|.|.+.+-. |+.+|.++.
T Consensus 567 TgSADKnVKiWGLdFGDCHKS~fA-----------------------------------------------HdDSvm~V~ 599 (888)
T KOG0306|consen 567 TGSADKNVKIWGLDFGDCHKSFFA-----------------------------------------------HDDSVMSVQ 599 (888)
T ss_pred eccCCCceEEeccccchhhhhhhc-----------------------------------------------ccCceeEEE
Confidence 999999999999999999877653 333799999
Q ss_pred cCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcC
Q 000410 1440 PLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATD 1518 (1553)
Q Consensus 1440 ~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1518 (1553)
|.|.. .++|+|.|+.|+.||-..-+....
T Consensus 600 F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~-------------------------------------------------- 629 (888)
T KOG0306|consen 600 FLPKTHLFFTCGKDGKVKQWDGEKFEEIQK-------------------------------------------------- 629 (888)
T ss_pred EcccceeEEEecCcceEEeechhhhhhhee--------------------------------------------------
Confidence 99977 566999999999999665444332
Q ss_pred ccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1519 SAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1519 ~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+.+|+..|+++ +..++|.+++|+|.|..|++|.
T Consensus 630 -L~~H~~ev~cL-av~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 630 -LDGHHSEVWCL-AVSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred -eccchheeeee-EEcCCCCeEEeccCCceeEeee
Confidence 23499999999 6889999999999999999994
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.9e-23 Score=230.41 Aligned_cols=253 Identities=19% Similarity=0.228 Sum_probs=206.1
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeec-CCCceEEEEEecCCcEEEEEeC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~-h~~~I~~l~f~~~~~~las~s~ 1207 (1553)
-++..++.+|..+|.-|.||||.+++++|+.|..+++||+.+++. +..|.. ++..+.|++|+|+|..+++|+.
T Consensus 259 ~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~------~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~ 332 (519)
T KOG0293|consen 259 FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDL------RHLYPSGLGFSVSSCAWCPDGFRFVTGSP 332 (519)
T ss_pred eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchh------hhhcccCcCCCcceeEEccCCceeEecCC
Confidence 457899999999999999999999999999999999999999983 333332 4567999999999999999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|++|..||.+. ++ ...|.......|.+++..++ |..+++.+.|..|++++..+..+.....
T Consensus 333 dr~i~~wdlDg------n~--------~~~W~gvr~~~v~dlait~D---gk~vl~v~~d~~i~l~~~e~~~dr~lis-- 393 (519)
T KOG0293|consen 333 DRTIIMWDLDG------NI--------LGNWEGVRDPKVHDLAITYD---GKYVLLVTVDKKIRLYNREARVDRGLIS-- 393 (519)
T ss_pred CCcEEEecCCc------ch--------hhcccccccceeEEEEEcCC---CcEEEEEecccceeeechhhhhhhcccc--
Confidence 99999999982 11 22333334467888999998 7788999999999999998877665444
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccC-CcceEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~-~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~ 1366 (1553)
.+.+|++++++.+|+++++.-.+..+++||+.....++.+..+..+ -+-+-|| .. .+..++++||.|+.
T Consensus 394 -e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCF-gg--------~~~~fiaSGSED~k 463 (519)
T KOG0293|consen 394 -EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCF-GG--------GNDKFIASGSEDSK 463 (519)
T ss_pred -ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEecc-CC--------CCcceEEecCCCce
Confidence 4678999999999999999999999999999988887777653332 2334444 21 13468999999999
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC--
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-- 1444 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-- 1444 (1553)
|+||+-.+|..+.++.++. ..|+|++|+|..
T Consensus 464 vyIWhr~sgkll~~LsGHs-----------------------------------------------~~vNcVswNP~~p~ 496 (519)
T KOG0293|consen 464 VYIWHRISGKLLAVLSGHS-----------------------------------------------KTVNCVSWNPADPE 496 (519)
T ss_pred EEEEEccCCceeEeecCCc-----------------------------------------------ceeeEEecCCCCHH
Confidence 9999999999888876433 379999999976
Q ss_pred eEEEccCCCeEEEEeCCCC
Q 000410 1445 DLLTGGTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1445 ~llTgg~Dg~IrlWDl~~~ 1463 (1553)
.+++||+||+||+|-....
T Consensus 497 m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 497 MFASASDDGTIRIWGPSDN 515 (519)
T ss_pred HhhccCCCCeEEEecCCcc
Confidence 6779999999999987643
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-23 Score=223.10 Aligned_cols=254 Identities=20% Similarity=0.246 Sum_probs=201.1
Q ss_pred CcccCccE--eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec-CCc
Q 000410 1124 GWRPRGIL--VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSA 1200 (1553)
Q Consensus 1124 ~W~p~G~l--v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~-~~~ 1200 (1553)
+|+-.|.+ ...+++|+++|..+.|.+|+..++|||.|.+|+.||+++++ ....+.+|...|.+++-+. +..
T Consensus 73 LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~------~~rk~k~h~~~vNs~~p~rrg~~ 146 (338)
T KOG0265|consen 73 LWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGK------RIRKHKGHTSFVNSLDPSRRGPQ 146 (338)
T ss_pred EEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccce------eeehhccccceeeecCccccCCe
Confidence 69977765 67888999999999999999999999999999999999987 3445667888888877443 345
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+.+|++||++++||++... .+. .......++.+.|.-. +..+.+|+-|+.|++||+|....
T Consensus 147 lv~SgsdD~t~kl~D~R~k~-------------~~~--t~~~kyqltAv~f~d~---s~qv~sggIdn~ikvWd~r~~d~ 208 (338)
T KOG0265|consen 147 LVCSGSDDGTLKLWDIRKKE-------------AIK--TFENKYQLTAVGFKDT---SDQVISGGIDNDIKVWDLRKNDG 208 (338)
T ss_pred EEEecCCCceEEEEeecccc-------------hhh--ccccceeEEEEEeccc---ccceeeccccCceeeeccccCcc
Confidence 67789999999999998411 111 1123456778888877 56899999999999999999999
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc----cceeecc-ccCCcceEEeecCCCCCccccCCC
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP----VNSWQYS-QVCPIEKMCLFVPPPNAAVSTTAR 1355 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~----l~s~~~~-~~~~I~~l~~~~p~~~~~~~s~~~ 1355 (1553)
..++.+ |.++|+.+..+|+|.++.+-+.|.++++||+|...+ ++.++.+ |+..++.+. ..+++++
T Consensus 209 ~~~lsG--h~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~--------cswsp~~ 278 (338)
T KOG0265|consen 209 LYTLSG--HADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLK--------CSWSPNG 278 (338)
T ss_pred eEEeec--ccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcce--------eeccCCC
Confidence 999987 999999999999999999999999999999996543 4444332 222222222 2345567
Q ss_pred CEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCc
Q 000410 1356 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1356 ~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
..+.+|+.|..+.+||.....++..+. +|...|
T Consensus 279 ~~i~ags~dr~vyvwd~~~r~~lyklp-----------------------------------------------Gh~gsv 311 (338)
T KOG0265|consen 279 TKITAGSADRFVYVWDTTSRRILYKLP-----------------------------------------------GHYGSV 311 (338)
T ss_pred CccccccccceEEEeecccccEEEEcC-----------------------------------------------CcceeE
Confidence 789999999999999988777766654 344579
Q ss_pred EEeccCCCC-eEEEccCCCeEEEE
Q 000410 1436 RSLLPLPGG-DLLTGGTDLKIRRW 1458 (1553)
Q Consensus 1436 ~sl~~sp~g-~llTgg~Dg~IrlW 1458 (1553)
.++.|+|.. .|+++++|++|.+=
T Consensus 312 n~~~Fhp~e~iils~~sdk~i~lg 335 (338)
T KOG0265|consen 312 NEVDFHPTEPIILSCSSDKTIYLG 335 (338)
T ss_pred EEeeecCCCcEEEEeccCceeEee
Confidence 999999987 67799999999873
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-22 Score=228.16 Aligned_cols=292 Identities=15% Similarity=0.222 Sum_probs=231.7
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC--
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD-- 1208 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D-- 1208 (1553)
.+..+.||..+|+-..|||.|-|+|||...|+|||||+...+.. ....+..-.++|.+++|..+++.+++.+..
T Consensus 51 ~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hi----LKnef~v~aG~I~Di~Wd~ds~RI~avGEGre 126 (603)
T KOG0318|consen 51 SVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHI----LKNEFQVLAGPIKDISWDFDSKRIAAVGEGRE 126 (603)
T ss_pred ceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCccee----eeeeeeecccccccceeCCCCcEEEEEecCcc
Confidence 36778999999999999999999999999999999999865432 223455667899999999999999887743
Q ss_pred --CcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceecc
Q 000410 1209 --GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286 (1553)
Q Consensus 1209 --G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~ 1286 (1553)
|.+.+||-.+ ..| ...+|...+..++|-|..+ -.+++|+.|++|.+|+=.--+-..++..
T Consensus 127 rfg~~F~~DSG~---SvG-------------ei~GhSr~ins~~~KpsRP--fRi~T~sdDn~v~ffeGPPFKFk~s~r~ 188 (603)
T KOG0318|consen 127 RFGHVFLWDSGN---SVG-------------EITGHSRRINSVDFKPSRP--FRIATGSDDNTVAFFEGPPFKFKSSFRE 188 (603)
T ss_pred ceeEEEEecCCC---ccc-------------eeeccceeEeeeeccCCCc--eEEEeccCCCeEEEeeCCCeeeeecccc
Confidence 3444555431 011 1225667889999999853 3899999999999997543333334443
Q ss_pred CCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceee--ccccCCcceEEeecCCCCCccccCCCCEEEEEEcC
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ--YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGC 1364 (1553)
Q Consensus 1287 ~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~--~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~d 1364 (1553)
|+..|.|+-|+|||+.+++.++||.+.+||-.++..+..+. .+|.+.|..+.| +|+. ..++++++|
T Consensus 189 --HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsW-sPDs---------~~~~T~SaD 256 (603)
T KOG0318|consen 189 --HSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSW-SPDS---------TQFLTVSAD 256 (603)
T ss_pred --cccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEE-CCCC---------ceEEEecCC
Confidence 88899999999999999999999999999999999887776 357889999999 6654 489999999
Q ss_pred CeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC
Q 000410 1365 NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1444 (1553)
Q Consensus 1365 g~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g 1444 (1553)
.+++|||+.+..+.+++....... +..| .+.| +.+
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~-------------------------------------------dqqv-G~lW-qkd 291 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVE-------------------------------------------DQQV-GCLW-QKD 291 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchh-------------------------------------------ceEE-EEEE-eCC
Confidence 999999999999988886332200 0122 3444 367
Q ss_pred eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCc
Q 000410 1445 DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHR 1524 (1553)
Q Consensus 1445 ~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 1524 (1553)
.|+|.+-+|.|-+++..+++...+++| |.
T Consensus 292 ~lItVSl~G~in~ln~~d~~~~~~i~G---------------------------------------------------Hn 320 (603)
T KOG0318|consen 292 HLITVSLSGTINYLNPSDPSVLKVISG---------------------------------------------------HN 320 (603)
T ss_pred eEEEEEcCcEEEEecccCCChhheecc---------------------------------------------------cc
Confidence 899999999999999998876555554 99
Q ss_pred cceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1525 DSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1525 d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-.|+++ ..++++.+|.|||.||.|.=|+
T Consensus 321 K~ITaL-tv~~d~~~i~SgsyDG~I~~W~ 348 (603)
T KOG0318|consen 321 KSITAL-TVSPDGKTIYSGSYDGHINSWD 348 (603)
T ss_pred cceeEE-EEcCCCCEEEeeccCceEEEEe
Confidence 999999 6899999999999999999995
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-23 Score=217.01 Aligned_cols=282 Identities=17% Similarity=0.249 Sum_probs=225.6
Q ss_pred eccccccCeeEEEEcC---CCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1134 HLQEHCSAVNEIAISH---DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1134 ~l~~H~~~V~~l~~sp---d~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
+-+||+.+|..++||| +|=||+|++.||.=.+-+-+++. -.-++.+|.+.|+..+...+-..-|+++.|-+
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgd------wigtfeghkgavw~~~l~~na~~aasaaadft 82 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGD------WIGTFEGHKGAVWSATLNKNATRAASAAADFT 82 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCC------cEEeeeccCcceeeeecCchhhhhhhhcccch
Confidence 3468999999999986 77899999999987776666554 45588999999999998888888899999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc-cceeccCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN-TWTLKAIPE 1289 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~-~~~l~~~~h 1289 (1553)
-+|||.-+.. ......|..+|..++|+.+ .+.|++|+.+..+++||+...+. ...+ .+|
T Consensus 83 akvw~a~tgd---------------elhsf~hkhivk~~af~~d---s~~lltgg~ekllrvfdln~p~App~E~--~gh 142 (334)
T KOG0278|consen 83 AKVWDAVTGD---------------ELHSFEHKHIVKAVAFSQD---SNYLLTGGQEKLLRVFDLNRPKAPPKEI--SGH 142 (334)
T ss_pred hhhhhhhhhh---------------hhhhhhhhheeeeEEeccc---chhhhccchHHHhhhhhccCCCCCchhh--cCC
Confidence 9999986311 1233467889999999998 67999999999999999987543 2333 359
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1369 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~v 1369 (1553)
.+.|..+.|-...+.+++.+.|++|++||.|+++.+++++.+ .+|+++.+ +++ |. +++.+..+.|.+
T Consensus 143 tg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~--s~VtSlEv-s~d---------G~-ilTia~gssV~F 209 (334)
T KOG0278|consen 143 TGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFN--SPVTSLEV-SQD---------GR-ILTIAYGSSVKF 209 (334)
T ss_pred CCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecC--CCCcceee-ccC---------CC-EEEEecCceeEE
Confidence 999999999887788888899999999999999999999874 46777777 443 44 556666778999
Q ss_pred EEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEE
Q 000410 1370 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLT 1448 (1553)
Q Consensus 1370 WDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llT 1448 (1553)
||..+...++.+..+ ..|.+...+|+. ++++
T Consensus 210 wdaksf~~lKs~k~P------------------------------------------------~nV~SASL~P~k~~fVa 241 (334)
T KOG0278|consen 210 WDAKSFGLLKSYKMP------------------------------------------------CNVESASLHPKKEFFVA 241 (334)
T ss_pred eccccccceeeccCc------------------------------------------------cccccccccCCCceEEe
Confidence 999987765555411 135555566754 7889
Q ss_pred ccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCcccee
Q 000410 1449 GGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1528 (1553)
Q Consensus 1449 gg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~ 1528 (1553)
||.|+.++.+|..+++..-.+ .++|.++|.
T Consensus 242 Gged~~~~kfDy~TgeEi~~~--------------------------------------------------nkgh~gpVh 271 (334)
T KOG0278|consen 242 GGEDFKVYKFDYNTGEEIGSY--------------------------------------------------NKGHFGPVH 271 (334)
T ss_pred cCcceEEEEEeccCCceeeec--------------------------------------------------ccCCCCceE
Confidence 999999999999877553321 134999999
Q ss_pred EEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1529 SLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1529 ~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+| .|+|+|...+|||.||+|++|.
T Consensus 272 cV-rFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 272 CV-RFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred EE-EECCCCceeeccCCCceEEEEE
Confidence 99 7999999999999999999994
|
|
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.6e-22 Score=250.07 Aligned_cols=288 Identities=18% Similarity=0.254 Sum_probs=231.0
Q ss_pred CCcccCccE-eeeccc-cccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1123 SGWRPRGIL-VAHLQE-HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1123 ~~W~p~G~l-v~~l~~-H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
..|++.... ...+.+ |...|++..|. ..++++++.|+++++||...+. .....+.+|.+.|++++|...++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~-----~i~~~l~GH~g~V~~l~~~~~~~ 262 (537)
T KOG0274|consen 190 KNWRKLFRRGYKVLLGTDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGY-----LILTRLVGHFGGVWGLAFPSGGD 262 (537)
T ss_pred ccccccccccceeecccCcchhhhheee--cCeEEecCCCceeEEeecccce-----EEEeeccCCCCCceeEEEecCCC
Confidence 456654333 233443 56789999997 6789999999999999998765 12333889999999999998899
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++|+.|.+++|||+.+. .+......|...+.++...+. .+++|+.|.+|++||+.++.+
T Consensus 263 ~lvsgS~D~t~rvWd~~sg--------------~C~~~l~gh~stv~~~~~~~~-----~~~sgs~D~tVkVW~v~n~~~ 323 (537)
T KOG0274|consen 263 KLVSGSTDKTERVWDCSTG--------------ECTHSLQGHTSSVRCLTIDPF-----LLVSGSRDNTVKVWDVTNGAC 323 (537)
T ss_pred EEEEEecCCcEEeEecCCC--------------cEEEEecCCCceEEEEEccCc-----eEeeccCCceEEEEeccCcce
Confidence 9999999999999997631 233444467788888866655 888899999999999999999
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEE
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1360 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s 1360 (1553)
+.++.+ |.++|+++.++ +..+++|+.||+|++||.+++++++++.. |..+|.++.+ .+. ..+++
T Consensus 324 l~l~~~--h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~g-H~~~V~sl~~-~~~----------~~~~S 387 (537)
T KOG0274|consen 324 LNLLRG--HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSG-HTGRVYSLIV-DSE----------NRLLS 387 (537)
T ss_pred EEEecc--ccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecC-CcceEEEEEe-cCc----------ceEEe
Confidence 999987 99999999998 78999999999999999999999999997 7888999866 221 57999
Q ss_pred EEcCCeEEEEEcCCC-cEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1361 AAGCNEVSLWNAENG-SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1361 ~s~dg~V~vWDl~tg-~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
|+.|+.|++||++++ +|..++..+.. .|.++.
T Consensus 388 gs~D~~IkvWdl~~~~~c~~tl~~h~~-----------------------------------------------~v~~l~ 420 (537)
T KOG0274|consen 388 GSLDTTIKVWDLRTKRKCIHTLQGHTS-----------------------------------------------LVSSLL 420 (537)
T ss_pred eeeccceEeecCCchhhhhhhhcCCcc-----------------------------------------------cccccc
Confidence 999999999999999 89888764332 233333
Q ss_pred cCCCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCc
Q 000410 1440 PLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDS 1519 (1553)
Q Consensus 1440 ~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1519 (1553)
+ -+..|++++.|++|++||...++..+++.++
T Consensus 421 ~-~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~----------------------------------------------- 452 (537)
T KOG0274|consen 421 L-RDNFLVSSSADGTIKLWDAEEGECLRTLEGR----------------------------------------------- 452 (537)
T ss_pred c-ccceeEeccccccEEEeecccCceeeeeccC-----------------------------------------------
Confidence 2 2447889999999999999988877766542
Q ss_pred cCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1520 AGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1520 ~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
|...|+.++ +. ...++++++||.+++|+
T Consensus 453 ---~~~~v~~l~-~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 453 ---HVGGVSALA-LG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred ---CcccEEEee-cC--cceEEEEecCCeeEEEe
Confidence 556777773 22 57899999999999995
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.9e-22 Score=238.34 Aligned_cols=269 Identities=17% Similarity=0.269 Sum_probs=218.7
Q ss_pred CCCCcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC
Q 000410 1121 PDSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1121 ~~~~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~ 1199 (1553)
.-..|+-+ |.|+..|.||.++|..++|+|++.+|+||++|-.||||+.+.. ++..++.+|-..|..+.|++.-
T Consensus 32 ~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r------rclftL~GHlDYVRt~~FHhey 105 (1202)
T KOG0292|consen 32 VIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR------RCLFTLLGHLDYVRTVFFHHEY 105 (1202)
T ss_pred eeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc------eehhhhccccceeEEeeccCCC
Confidence 34689955 9999999999999999999999999999999999999998864 3777888999999999999999
Q ss_pred cEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1279 (1553)
Q Consensus 1200 ~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~ 1279 (1553)
-++++||+|.+|+||+..+ ..+.....+|..-|.|..|+|. ...++++|-|-+|++||+..-+
T Consensus 106 PWIlSASDDQTIrIWNwqs--------------r~~iavltGHnHYVMcAqFhpt---EDlIVSaSLDQTVRVWDisGLR 168 (1202)
T KOG0292|consen 106 PWILSASDDQTIRIWNWQS--------------RKCIAVLTGHNHYVMCAQFHPT---EDLIVSASLDQTVRVWDISGLR 168 (1202)
T ss_pred ceEEEccCCCeEEEEeccC--------------CceEEEEecCceEEEeeccCCc---cceEEEecccceEEEEeecchh
Confidence 9999999999999999973 1334455678889999999997 5699999999999999985311
Q ss_pred ---------------------------ccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeec--
Q 000410 1280 ---------------------------NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY-- 1330 (1553)
Q Consensus 1280 ---------------------------~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~-- 1330 (1553)
.+-..-..+|...|+-++|+|.-..+++|+.|..|++|-+.. .+.|+.
T Consensus 169 kk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne---tKaWEvDt 245 (1202)
T KOG0292|consen 169 KKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE---TKAWEVDT 245 (1202)
T ss_pred ccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc---ccceeehh
Confidence 011111235888899999999999999999999999999863 345553
Q ss_pred --cccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCC
Q 000410 1331 --SQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1408 (1553)
Q Consensus 1331 --~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~ 1408 (1553)
+|...|.++.| ||.. .++++.|.|+.|+|||+.+.+++++|+..+.
T Consensus 246 crgH~nnVssvlf-hp~q---------~lIlSnsEDksirVwDm~kRt~v~tfrrend---------------------- 293 (1202)
T KOG0292|consen 246 CRGHYNNVSSVLF-HPHQ---------DLILSNSEDKSIRVWDMTKRTSVQTFRREND---------------------- 293 (1202)
T ss_pred hhcccCCcceEEe-cCcc---------ceeEecCCCccEEEEecccccceeeeeccCC----------------------
Confidence 35557777777 7754 4899999999999999999999999873221
Q ss_pred CccccccccccccccccCCCCCCccCcEEeccCCCCeEEEccCCCeEEEEeCCCCCCceEEeCC
Q 000410 1409 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGP 1472 (1553)
Q Consensus 1409 ~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~ 1472 (1553)
..+.++.+|...|+.+|.|+-+.++-++.....+.+.+.
T Consensus 294 -------------------------RFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n 332 (1202)
T KOG0292|consen 294 -------------------------RFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGN 332 (1202)
T ss_pred -------------------------eEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCC
Confidence 357777778888888888888888888777777777664
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.8e-22 Score=209.90 Aligned_cols=284 Identities=19% Similarity=0.248 Sum_probs=225.5
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec-CCcEEEEEeCCCcE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGII 1211 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~-~~~~las~s~DG~I 1211 (1553)
..+++|.+.|.+|+|+.+|..+++||.|++++||++.... +.....+.+|++.|-.++|.| +.+.|++++.|.+|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r----~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR----FRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh----hhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 5678999999999999999999999999999999998763 334567889998899999987 67899999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCc
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
++||++... ++...... +.-+ -+.|+|+ +.+++++..|..|...|.|+.+.....+. .-
T Consensus 90 r~wd~r~~k-------------~~~~i~~~-~eni-~i~wsp~---g~~~~~~~kdD~it~id~r~~~~~~~~~~---~~ 148 (313)
T KOG1407|consen 90 RIWDIRSGK-------------CTARIETK-GENI-NITWSPD---GEYIAVGNKDDRITFIDARTYKIVNEEQF---KF 148 (313)
T ss_pred EEEEeccCc-------------EEEEeecc-Ccce-EEEEcCC---CCEEEEecCcccEEEEEecccceeehhcc---cc
Confidence 999998411 11122222 2222 2468998 77999999999999999999887766554 34
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000410 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1371 (1553)
Q Consensus 1292 ~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWD 1371 (1553)
.+.-++|+-++..++..+.-|.|.|-..-..+++.+++. |. .+++|. .++++|+++++|+.|..+.+||
T Consensus 149 e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~A-H~--snCicI--------~f~p~GryfA~GsADAlvSLWD 217 (313)
T KOG1407|consen 149 EVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKA-HP--SNCICI--------EFDPDGRYFATGSADALVSLWD 217 (313)
T ss_pred eeeeeeecCCCCEEEEecCCceEEEEecccccccccccc-CC--cceEEE--------EECCCCceEeeccccceeeccC
Confidence 577889998788888878889999999888888888876 33 344433 3455678999999999999999
Q ss_pred cCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCe-EEEcc
Q 000410 1372 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGD-LLTGG 1450 (1553)
Q Consensus 1372 l~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~-llTgg 1450 (1553)
++..-|.+++.-.+ -+||.+.|+.+|+ |++|+
T Consensus 218 ~~ELiC~R~isRld-----------------------------------------------wpVRTlSFS~dg~~lASaS 250 (313)
T KOG1407|consen 218 VDELICERCISRLD-----------------------------------------------WPVRTLSFSHDGRMLASAS 250 (313)
T ss_pred hhHhhhheeecccc-----------------------------------------------CceEEEEeccCcceeeccC
Confidence 99998988876222 2799999999995 55999
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEE
Q 000410 1451 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1530 (1553)
Q Consensus 1451 ~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1530 (1553)
.|.-|-+=+++++.+..-+. |.++-..|
T Consensus 251 EDh~IDIA~vetGd~~~eI~----------------------------------------------------~~~~t~tV 278 (313)
T KOG1407|consen 251 EDHFIDIAEVETGDRVWEIP----------------------------------------------------CEGPTFTV 278 (313)
T ss_pred ccceEEeEecccCCeEEEee----------------------------------------------------ccCCceeE
Confidence 99999999998887665333 55667788
Q ss_pred eeeecCCcEEEEEcCC---------ceEEEc
Q 000410 1531 GSVKLNQRLLISSSRD---------GAIKVW 1552 (1553)
Q Consensus 1531 a~~~~~~~~LvSas~D---------G~IkVW 1552 (1553)
+|+|...+||-+.+| |.||+|
T Consensus 279 -AWHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 279 -AWHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred -EecCCCceeeEEecCCCCccccccceeEEe
Confidence 699999998887654 678876
|
|
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.3e-22 Score=248.73 Aligned_cols=257 Identities=22% Similarity=0.349 Sum_probs=213.3
Q ss_pred CCcc-cCccEeee-ccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1123 SGWR-PRGILVAH-LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1123 ~~W~-p~G~lv~~-l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
..|+ -.|.++.. +.||.+.|.++++...+.+++|||.|.|++|||+.+++ +..++.+|.+.|.|+.. .+.
T Consensus 231 ~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~------C~~~l~gh~stv~~~~~--~~~ 302 (537)
T KOG0274|consen 231 HLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE------CTHSLQGHTSSVRCLTI--DPF 302 (537)
T ss_pred EEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc------EEEEecCCCceEEEEEc--cCc
Confidence 3688 44888877 99999999999998777899999999999999999987 66778899998988866 445
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++||.|.+|+||++.+. .+......|...|.++.++.+ ++++|+.|++|.+||++++++
T Consensus 303 ~~~sgs~D~tVkVW~v~n~--------------~~l~l~~~h~~~V~~v~~~~~-----~lvsgs~d~~v~VW~~~~~~c 363 (537)
T KOG0274|consen 303 LLVSGSRDNTVKVWDVTNG--------------ACLNLLRGHTGPVNCVQLDEP-----LLVSGSYDGTVKVWDPRTGKC 363 (537)
T ss_pred eEeeccCCceEEEEeccCc--------------ceEEEeccccccEEEEEecCC-----EEEEEecCceEEEEEhhhcee
Confidence 7888999999999999731 222333348889999988844 999999999999999999999
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cccceeeccccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~-~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
+.++.+ |.+.|+++.+++. ..+++|+.|++|++||++.+ .++..+.. |..-+..+.+ .+..++
T Consensus 364 l~sl~g--H~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~-h~~~v~~l~~------------~~~~Lv 427 (537)
T KOG0274|consen 364 LKSLSG--HTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQG-HTSLVSSLLL------------RDNFLV 427 (537)
T ss_pred eeeecC--CcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcC-Cccccccccc------------ccceeE
Confidence 999987 9999999999876 79999999999999999999 88888876 3334444433 356899
Q ss_pred EEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1360 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
+++.|+.|++||.++++|++++... +..+|.+++
T Consensus 428 s~~aD~~Ik~WD~~~~~~~~~~~~~----------------------------------------------~~~~v~~l~ 461 (537)
T KOG0274|consen 428 SSSADGTIKLWDAEEGECLRTLEGR----------------------------------------------HVGGVSALA 461 (537)
T ss_pred eccccccEEEeecccCceeeeeccC----------------------------------------------CcccEEEee
Confidence 9999999999999999999998742 112566666
Q ss_pred cCCCCeEEEccCCCeEEEEeCCCCCCceEE
Q 000410 1440 PLPGGDLLTGGTDLKIRRWDHCSPGRSYCI 1469 (1553)
Q Consensus 1440 ~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~ 1469 (1553)
+. +..+++++.||++++||+.+++..+.+
T Consensus 462 ~~-~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 462 LG-KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred cC-cceEEEEecCCeeEEEecccCchhhhh
Confidence 64 457899999999999999988776644
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-24 Score=242.70 Aligned_cols=248 Identities=20% Similarity=0.285 Sum_probs=183.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
.|..+++||.|.|+.||++.+.. ..||+|.+.... .-.++..|.++|..+ .+.||+++.+++..++.
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-------~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-------SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-------CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 57889999999999999997643 569999986542 223467777888887 48999999999999999
Q ss_pred EEEEeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC-CcEEEeecCcccccc--
Q 000410 100 AYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKPTY-- 175 (1553)
Q Consensus 100 ~~lV~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~-~~vkL~DFG~a~~~~-- 175 (1553)
..+||||++. .-.++... ++..+++++++.++.||.++|.+|||||||||.|+|.+.. +.-.|+|||++....
T Consensus 110 v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~ 186 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY 186 (418)
T ss_pred eEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence 9999999995 66666654 6789999999999999999999999999999999999854 678999999986110
Q ss_pred C--------------C--C-----------CCCCCcce--------eeecCCCCccccCcchhcccCCccccccCCCCCC
Q 000410 176 I--------------P--Y-----------DDPSDFSF--------FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKP 220 (1553)
Q Consensus 176 ~--------------~--~-----------~~~~~~~~--------~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~ 220 (1553)
. + . ..|..+.. ..-...||++|+|||++...+ ..++
T Consensus 187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~---------~Qtt 257 (418)
T KOG1167|consen 187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP---------RQTT 257 (418)
T ss_pred hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc---------CcCC
Confidence 0 0 0 00111111 011345899999999986432 4578
Q ss_pred cccHHHHHHHHHHHHcCCCCC-CchH----H------------HH--HHhcC---------------------------C
Q 000410 221 SMDIFAVGCVIAELFLEVPFF-ELSH----L------------LA--YRRGQ---------------------------Y 254 (1553)
Q Consensus 221 ~~DIwSlG~il~eLltg~~pf-~~~~----~------------~~--~~~~~---------------------------~ 254 (1553)
++||||.|+|+..++++..|| ...+ + .+ ...+. +
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 999999999999999996665 2100 0 00 00000 0
Q ss_pred C------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 D------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~------~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. .........+..+.+|+.+||+.||.+|.||+++|+|
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0 0001122334578999999999999999999999999
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-22 Score=238.96 Aligned_cols=256 Identities=17% Similarity=0.216 Sum_probs=204.4
Q ss_pred ccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEE
Q 000410 1135 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMF 1214 (1553)
Q Consensus 1135 l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vw 1214 (1553)
|..-+..|.+++|+|.-.+++|+-..|.|++||-+-+. ..-.+..|.++|..++|+|....||+||+|-.|+||
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~t------li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGT------LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVW 78 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhh------HHhhhhccCCccceeeecCCCCeEEecCCccEEEEE
Confidence 44456789999999999999999999999999998654 344678899999999999999999999999999999
Q ss_pred EeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceE
Q 000410 1215 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1294 (1553)
Q Consensus 1215 di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~It 1294 (1553)
+... ..+.....+|-.-|..+.||+. ...++++|.|-+|++|+-.+++++..+.+ |...|.
T Consensus 79 nYk~--------------rrclftL~GHlDYVRt~~FHhe---yPWIlSASDDQTIrIWNwqsr~~iavltG--HnHYVM 139 (1202)
T KOG0292|consen 79 NYKT--------------RRCLFTLLGHLDYVRTVFFHHE---YPWILSASDDQTIRIWNWQSRKCIAVLTG--HNHYVM 139 (1202)
T ss_pred eccc--------------ceehhhhccccceeEEeeccCC---CceEEEccCCCeEEEEeccCCceEEEEec--CceEEE
Confidence 9863 1222234467788899999998 77999999999999999999999999988 777899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcc----------------------------cceeeccccCCcceEEeecCCC
Q 000410 1295 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVP----------------------------VNSWQYSQVCPIEKMCLFVPPP 1346 (1553)
Q Consensus 1295 sl~~sp~g~~LvsGs~dG~l~lWDlr~~~~----------------------------l~s~~~~~~~~I~~l~~~~p~~ 1346 (1553)
|..|+|....++++|-|.+|++||+.-... ++-.-.+|...|+.+.| ||
T Consensus 140 cAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAf-hp-- 216 (1202)
T KOG0292|consen 140 CAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAF-HP-- 216 (1202)
T ss_pred eeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEe-cC--
Confidence 999999999999999999999999742110 11111234445555555 44
Q ss_pred CCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccC
Q 000410 1347 NAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELN 1426 (1553)
Q Consensus 1347 ~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 1426 (1553)
.-+.+++|+.|..|++|.+...+ .|+..
T Consensus 217 -------TlpliVSG~DDRqVKlWrmnetK---------------------------------------------aWEvD 244 (1202)
T KOG0292|consen 217 -------TLPLIVSGADDRQVKLWRMNETK---------------------------------------------AWEVD 244 (1202)
T ss_pred -------CcceEEecCCcceeeEEEecccc---------------------------------------------ceeeh
Confidence 34689999999999999986322 23333
Q ss_pred CCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEe
Q 000410 1427 EPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCIC 1470 (1553)
Q Consensus 1427 ~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~ 1470 (1553)
...+|...|.++.|+|.. .|++.|.|+.||+||+...+...++.
T Consensus 245 tcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfr 289 (1202)
T KOG0292|consen 245 TCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFR 289 (1202)
T ss_pred hhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeee
Confidence 445777789999999965 67799999999999998766555443
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.3e-23 Score=229.30 Aligned_cols=289 Identities=14% Similarity=0.202 Sum_probs=232.8
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
..+..|.+.|+.+.|-++...|+||+.|..|++|++.... .....++.+..+.|+++.|.++++++++++.|+.++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k----~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r 244 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK----SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLR 244 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccch----hhhhhhhhccCCCcceeeecCCCceEEeecCCCcee
Confidence 4567899999999999998999999999999999987543 112335566677899999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcc
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1292 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1292 (1553)
+|+++.. ..+....+|...|+++.|.-. ...+++|+.|.+|+.||+....|..++-. ...
T Consensus 245 ~Wnvd~~--------------r~~~TLsGHtdkVt~ak~~~~---~~~vVsgs~DRtiK~WDl~k~~C~kt~l~---~S~ 304 (459)
T KOG0288|consen 245 LWNVDSL--------------RLRHTLSGHTDKVTAAKFKLS---HSRVVSGSADRTIKLWDLQKAYCSKTVLP---GSQ 304 (459)
T ss_pred eeeccch--------------hhhhhhcccccceeeehhhcc---ccceeeccccchhhhhhhhhhheeccccc---ccc
Confidence 9999731 223334457888899888876 33599999999999999999888877643 345
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000410 1293 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1372 (1553)
Q Consensus 1293 Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl 1372 (1553)
+..++.+ +..+++|-.|+.|++||.|...++.+.... +.|+++.. .+ +|..+.+++-|..+.+.|+
T Consensus 305 cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g--g~vtSl~l-s~---------~g~~lLsssRDdtl~viDl 370 (459)
T KOG0288|consen 305 CNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLG--GRVTSLDL-SM---------DGLELLSSSRDDTLKVIDL 370 (459)
T ss_pred ccceEec--ceeeeecccccceEEEeccCCceeeEeecC--cceeeEee-cc---------CCeEEeeecCCCceeeeec
Confidence 6677776 457889999999999999999988877653 37887776 33 4557888899999999999
Q ss_pred CCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccC
Q 000410 1373 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGT 1451 (1553)
Q Consensus 1373 ~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~ 1451 (1553)
++.+.++++...... +++ ..+.+.|+|++ ++++||.
T Consensus 371 Rt~eI~~~~sA~g~k-----------------------------------------~as--DwtrvvfSpd~~YvaAGS~ 407 (459)
T KOG0288|consen 371 RTKEIRQTFSAEGFK-----------------------------------------CAS--DWTRVVFSPDGSYVAAGSA 407 (459)
T ss_pred ccccEEEEeeccccc-----------------------------------------ccc--ccceeEECCCCceeeeccC
Confidence 999988888743321 111 26778899999 6669999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCcc-ceeEE
Q 000410 1452 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRD-SILSL 1530 (1553)
Q Consensus 1452 Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d-~I~~v 1530 (1553)
||.|++|++.+++.-++++++ |.+ .|+++
T Consensus 408 dgsv~iW~v~tgKlE~~l~~s--------------------------------------------------~s~~aI~s~ 437 (459)
T KOG0288|consen 408 DGSVYIWSVFTGKLEKVLSLS--------------------------------------------------TSNAAITSL 437 (459)
T ss_pred CCcEEEEEccCceEEEEeccC--------------------------------------------------CCCcceEEE
Confidence 999999999998887777753 233 79999
Q ss_pred eeeecCCcEEEEEcCCceEEEcC
Q 000410 1531 GSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1531 a~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|++.|..|+++|+++.+.+|.
T Consensus 438 -~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 438 -SWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred -EEcCCCchhhcccCCcceEecC
Confidence 7999999999999999999995
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.7e-22 Score=209.88 Aligned_cols=283 Identities=20% Similarity=0.264 Sum_probs=209.2
Q ss_pred eEEEEcC--CCCE-EEEEe-----CCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC-CcEEEEEeCCCcEEE
Q 000410 1143 NEIAISH--DHSF-FVSAS-----DDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACDGIIHM 1213 (1553)
Q Consensus 1143 ~~l~~sp--d~~~-laSgS-----~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~-~~~las~s~DG~I~v 1213 (1553)
+++.||| ++++ +||+. ..|++.|-++.+..... ..+.|.-..+ +.+++|+++ .+.+++|+.||++++
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~---e~~s~d~~D~-LfdV~Wse~~e~~~~~a~GDGSLrl 87 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQ---ECQSYDTEDG-LFDVAWSENHENQVIAASGDGSLRL 87 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeE---EEEeeecccc-eeEeeecCCCcceEEEEecCceEEE
Confidence 5778888 4443 33333 46889999987443222 2334544444 999999985 678889999999999
Q ss_pred EEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcce
Q 000410 1214 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYV 1293 (1553)
Q Consensus 1214 wdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~I 1293 (1553)
||..... ..+.. ..+|...|.++.|++.. ...+++++.|++|++||...+.-+.++.+ |...|
T Consensus 88 ~d~~~~s------------~Pi~~-~kEH~~EV~Svdwn~~~--r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g--h~~~I 150 (311)
T KOG0277|consen 88 FDLTMPS------------KPIHK-FKEHKREVYSVDWNTVR--RRIFLTSSWDGTIKLWDPNRPNSVQTFNG--HNSCI 150 (311)
T ss_pred eccCCCC------------cchhH-HHhhhhheEEecccccc--ceeEEeeccCCceEeecCCCCcceEeecC--CccEE
Confidence 9964211 12222 33566778888999874 56888889999999999999999999877 89999
Q ss_pred EEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000410 1294 SSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1372 (1553)
Q Consensus 1294 tsl~~sp-~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl 1372 (1553)
...+|+| .++.++++|.||++++||+|..-....+.. |...|.++.| +. .+.+.+++|+.|+.|+.||+
T Consensus 151 y~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~a-h~~Eil~cdw-~k--------y~~~vl~Tg~vd~~vr~wDi 220 (311)
T KOG0277|consen 151 YQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEA-HNSEILCCDW-SK--------YNHNVLATGGVDNLVRGWDI 220 (311)
T ss_pred EEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEe-ccceeEeecc-cc--------cCCcEEEecCCCceEEEEeh
Confidence 9999999 568999999999999999997644444444 5567777777 22 23468999999999999999
Q ss_pred CCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC--eEEEcc
Q 000410 1373 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLTGG 1450 (1553)
Q Consensus 1373 ~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g--~llTgg 1450 (1553)
++.+.. ++ +..+|...||.+.|+|.. .|+|++
T Consensus 221 r~~r~p-l~---------------------------------------------eL~gh~~AVRkvk~Sph~~~lLaSas 254 (311)
T KOG0277|consen 221 RNLRTP-LF---------------------------------------------ELNGHGLAVRKVKFSPHHASLLASAS 254 (311)
T ss_pred hhcccc-ce---------------------------------------------eecCCceEEEEEecCcchhhHhhhcc
Confidence 865410 00 012455579999999976 677999
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEE
Q 000410 1451 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1530 (1553)
Q Consensus 1451 ~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1530 (1553)
.|.++|+||...+.... +....|++-|.++
T Consensus 255 YDmT~riw~~~~~ds~~--------------------------------------------------e~~~~HtEFv~g~ 284 (311)
T KOG0277|consen 255 YDMTVRIWDPERQDSAI--------------------------------------------------ETVDHHTEFVCGL 284 (311)
T ss_pred ccceEEecccccchhhh--------------------------------------------------hhhhccceEEecc
Confidence 99999999987543211 0111388999998
Q ss_pred eeeecC-CcEEEEEcCCceEEEcC
Q 000410 1531 GSVKLN-QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1531 a~~~~~-~~~LvSas~DG~IkVWk 1553 (1553)
.|+.- ...+|+++.|+.++||.
T Consensus 285 -Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 285 -DWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred -ccccccCceeeecccccceeeec
Confidence 67664 77899999999999995
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=215.86 Aligned_cols=254 Identities=17% Similarity=0.251 Sum_probs=198.7
Q ss_pred cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEe
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s 1206 (1553)
..|--|.+|.||+++|.+.....+...-|||++|=|.||||.-++.... .-.|...|.+++|+.+.+.|++|+
T Consensus 47 ~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelh-------sf~hkhivk~~af~~ds~~lltgg 119 (334)
T KOG0278|consen 47 DTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELH-------SFEHKHIVKAVAFSQDSNYLLTGG 119 (334)
T ss_pred CCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhh-------hhhhhheeeeEEecccchhhhccc
Confidence 4477799999999999999999888899999999999999998876322 224566699999999999999999
Q ss_pred CCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceecc
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286 (1553)
Q Consensus 1207 ~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~ 1286 (1553)
.+..++|||++.... ....+. .|...|..+-|... .+.+++++.|++|++||.|+|..+.+++.
T Consensus 120 ~ekllrvfdln~p~A------------pp~E~~-ghtg~Ir~v~wc~e---D~~iLSSadd~tVRLWD~rTgt~v~sL~~ 183 (334)
T KOG0278|consen 120 QEKLLRVFDLNRPKA------------PPKEIS-GHTGGIRTVLWCHE---DKCILSSADDKTVRLWDHRTGTEVQSLEF 183 (334)
T ss_pred hHHHhhhhhccCCCC------------Cchhhc-CCCCcceeEEEecc---CceEEeeccCCceEEEEeccCcEEEEEec
Confidence 999999999974221 111122 23334444445554 34788889999999999999999999986
Q ss_pred CCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1287 ~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~ 1366 (1553)
...|+|+-++++|++|.++ ..+.|.+||......+++...+- .|++..+ +|.. ..+++|+.|..
T Consensus 184 ---~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~--nV~SASL-~P~k---------~~fVaGged~~ 247 (334)
T KOG0278|consen 184 ---NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPC--NVESASL-HPKK---------EFFVAGGEDFK 247 (334)
T ss_pred ---CCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCcc--ccccccc-cCCC---------ceEEecCcceE
Confidence 5579999999999887665 45679999999999999887653 4555555 5543 46778888999
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeE
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDL 1446 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~l 1446 (1553)
+..||+.+|+.+..+. .+|..+|.|+.|+|+|.+
T Consensus 248 ~~kfDy~TgeEi~~~n----------------------------------------------kgh~gpVhcVrFSPdGE~ 281 (334)
T KOG0278|consen 248 VYKFDYNTGEEIGSYN----------------------------------------------KGHFGPVHCVRFSPDGEL 281 (334)
T ss_pred EEEEeccCCceeeecc----------------------------------------------cCCCCceEEEEECCCCce
Confidence 9999999998655531 245558999999999965
Q ss_pred E-EccCCCeEEEEeCCCCCC
Q 000410 1447 L-TGGTDLKIRRWDHCSPGR 1465 (1553)
Q Consensus 1447 l-Tgg~Dg~IrlWDl~~~~~ 1465 (1553)
. +|+.||+||+|.+.-+..
T Consensus 282 yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 282 YASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred eeccCCCceEEEEEecCCCc
Confidence 5 999999999999865443
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-22 Score=207.98 Aligned_cols=224 Identities=17% Similarity=0.213 Sum_probs=181.0
Q ss_pred CCcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcE
Q 000410 1123 SGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~ 1201 (1553)
.+|+|. |.|+.+..+|...|..++.+.|+..|++|+.|..|.+||+.++. ....+.+|.+.|+.+.|.+....
T Consensus 42 rLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk------v~Rr~rgH~aqVNtV~fNeesSV 115 (307)
T KOG0316|consen 42 RLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK------VDRRFRGHLAQVNTVRFNEESSV 115 (307)
T ss_pred EeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCe------eeeecccccceeeEEEecCcceE
Confidence 589965 99999999999999999999999999999999999999999986 44567899999999999999999
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+++||.|.++++||.+... ...+...+. ....|.++..+.. .|++|+.||+++.||+|.|+..
T Consensus 116 v~SgsfD~s~r~wDCRS~s-----------~ePiQilde-a~D~V~Si~v~~h-----eIvaGS~DGtvRtydiR~G~l~ 178 (307)
T KOG0316|consen 116 VASGSFDSSVRLWDCRSRS-----------FEPIQILDE-AKDGVSSIDVAEH-----EIVAGSVDGTVRTYDIRKGTLS 178 (307)
T ss_pred EEeccccceeEEEEcccCC-----------CCccchhhh-hcCceeEEEeccc-----EEEeeccCCcEEEEEeecceee
Confidence 9999999999999998411 122222222 2334555555543 8999999999999999999876
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
...- ..+|+|++|+++++..+.|+.+++|++-|-.+++.++++.. |...-.++..+- ......+++|
T Consensus 179 sDy~----g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG-hkn~eykldc~l--------~qsdthV~sg 245 (307)
T KOG0316|consen 179 SDYF----GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG-HKNMEYKLDCCL--------NQSDTHVFSG 245 (307)
T ss_pred hhhc----CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc-cccceeeeeeee--------cccceeEEec
Confidence 6553 35799999999999999999999999999999999999886 333333333311 1123479999
Q ss_pred EcCCeEEEEEcCCCcEEEEEe
Q 000410 1362 AGCNEVSLWNAENGSCHQVLR 1382 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~ 1382 (1553)
+.||.|.+||+........+.
T Consensus 246 SEDG~Vy~wdLvd~~~~sk~~ 266 (307)
T KOG0316|consen 246 SEDGKVYFWDLVDETQISKLS 266 (307)
T ss_pred cCCceEEEEEeccceeeeeec
Confidence 999999999999877655554
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-21 Score=225.16 Aligned_cols=253 Identities=25% Similarity=0.388 Sum_probs=204.5
Q ss_pred CcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEE
Q 000410 1124 GWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~l 1202 (1553)
.|+.. +.....+.+|...|..+.|+|+++++++|+.||.|++||+.+.+ ....+..|...|.++.|.++++.+
T Consensus 35 i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~ 108 (289)
T cd00200 35 VWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE------CVRTLTGHTSYVSSVAFSPDGRIL 108 (289)
T ss_pred EEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc------ceEEEeccCCcEEEEEEcCCCCEE
Confidence 57643 55778889999999999999999999999999999999998753 334556777789999999998888
Q ss_pred EEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 as~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
++++.||.|++|++.... ..... ..+...+.++.|+|+ +.++++++.+|.|++||+++++...
T Consensus 109 ~~~~~~~~i~~~~~~~~~-------------~~~~~-~~~~~~i~~~~~~~~---~~~l~~~~~~~~i~i~d~~~~~~~~ 171 (289)
T cd00200 109 SSSSRDKTIKVWDVETGK-------------CLTTL-RGHTDWVNSVAFSPD---GTFVASSSQDGTIKLWDLRTGKCVA 171 (289)
T ss_pred EEecCCCeEEEEECCCcE-------------EEEEe-ccCCCcEEEEEEcCc---CCEEEEEcCCCcEEEEEccccccce
Confidence 888889999999996211 11111 145567888999997 5688888889999999999988888
Q ss_pred eeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEE
Q 000410 1283 TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1362 (1553)
Q Consensus 1283 ~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s 1362 (1553)
.+.. |.+.+++++|+|+++.+++|+.+|.+++||++.+..+..+.. +..++..+.+ +|. +.++++++
T Consensus 172 ~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~-~~~---------~~~~~~~~ 238 (289)
T cd00200 172 TLTG--HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG-HENGVNSVAF-SPD---------GYLLASGS 238 (289)
T ss_pred eEec--CccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhh-cCCceEEEEE-cCC---------CcEEEEEc
Confidence 7764 777999999999999999999999999999998888777643 4557888877 543 34677777
Q ss_pred cCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC
Q 000410 1363 GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP 1442 (1553)
Q Consensus 1363 ~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp 1442 (1553)
.++.|.+||+.+++....+.. +...|.++.|++
T Consensus 239 ~~~~i~i~~~~~~~~~~~~~~-----------------------------------------------~~~~i~~~~~~~ 271 (289)
T cd00200 239 EDGTIRVWDLRTGECVQTLSG-----------------------------------------------HTNSVTSLAWSP 271 (289)
T ss_pred CCCcEEEEEcCCceeEEEccc-----------------------------------------------cCCcEEEEEECC
Confidence 799999999998776655541 122689999999
Q ss_pred CC-eEEEccCCCeEEEEe
Q 000410 1443 GG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1443 ~g-~llTgg~Dg~IrlWD 1459 (1553)
++ .+++++.|+.|++||
T Consensus 272 ~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 272 DGKRLASGSADGTIRIWD 289 (289)
T ss_pred CCCEEEEecCCCeEEecC
Confidence 86 777999999999996
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.3e-22 Score=219.40 Aligned_cols=275 Identities=18% Similarity=0.221 Sum_probs=210.9
Q ss_pred CCCcccCccEeeeccccccCeeEEEEcC-C--CCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC
Q 000410 1122 DSGWRPRGILVAHLQEHCSAVNEIAISH-D--HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1198 (1553)
Q Consensus 1122 ~~~W~p~G~lv~~l~~H~~~V~~l~~sp-d--~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~ 1198 (1553)
-..|+..|+.+.++.||.++|.+++|.- + ...|+|||.|.++++|.++.++.... ......+|...|-++...++
T Consensus 127 ~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~--~~~~~~GHk~~V~sVsv~~s 204 (423)
T KOG0313|consen 127 SRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVK--ALKVCRGHKRSVDSVSVDSS 204 (423)
T ss_pred eEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhh--HHhHhcccccceeEEEecCC
Confidence 3579999999999999999999988843 2 23799999999999999987663322 22233489999999999999
Q ss_pred CcEEEEEeCCCcEEEEEeeecccCC---------C--ccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCC
Q 000410 1199 SAQVVVGACDGIIHMFSVDHISRGL---------G--NVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN 1267 (1553)
Q Consensus 1199 ~~~las~s~DG~I~vwdi~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~d 1267 (1553)
|..|++||.|.+|.||+.....-.. + ...+..+.........+|..+|..+.|++. ..++++++|
T Consensus 205 gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~----~v~yS~SwD 280 (423)
T KOG0313|consen 205 GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDA----TVIYSVSWD 280 (423)
T ss_pred CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCC----CceEeeccc
Confidence 9999999999999999943210000 0 001111222222334567889999999885 289999999
Q ss_pred ceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc--cceeeccccCCcceEEeecCC
Q 000410 1268 CGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP--VNSWQYSQVCPIEKMCLFVPP 1345 (1553)
Q Consensus 1268 g~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~--l~s~~~~~~~~I~~l~~~~p~ 1345 (1553)
.+|+.||+.++.+..++.. ....+|+.++|..+.|++|++|..+++||-|.+.. +..--..|...|..+.| +|.
T Consensus 281 HTIk~WDletg~~~~~~~~---~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkw-sp~ 356 (423)
T KOG0313|consen 281 HTIKVWDLETGGLKSTLTT---NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKW-SPT 356 (423)
T ss_pred ceEEEEEeecccceeeeec---CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheec-CCC
Confidence 9999999999999988875 56799999999999999999999999999998632 22212346678888888 665
Q ss_pred CCCccccCCCCEEEEEEcCCeEEEEEcCCCc-EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccc
Q 000410 1346 PNAAVSTTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDE 1424 (1553)
Q Consensus 1346 ~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 1424 (1553)
.. ..+++|+.|+.+++||+++.. .+..+.
T Consensus 357 ~~--------~~~~S~S~D~t~klWDvRS~k~plydI~------------------------------------------ 386 (423)
T KOG0313|consen 357 NE--------FQLVSGSYDNTVKLWDVRSTKAPLYDIA------------------------------------------ 386 (423)
T ss_pred Cc--------eEEEEEecCCeEEEEEeccCCCcceeec------------------------------------------
Confidence 43 578999999999999998654 333333
Q ss_pred cCCCCCCccCcEEeccCCCCeEEEccCCCeEEEEeCC
Q 000410 1425 LNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1425 l~~~~~~~~~V~sl~~sp~g~llTgg~Dg~IrlWDl~ 1461 (1553)
+|...|.++.|...+.|+|||.|.+||++.-.
T Consensus 387 -----~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 387 -----GHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred -----cCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 23336899999888899999999999998743
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.2e-22 Score=217.58 Aligned_cols=255 Identities=15% Similarity=0.211 Sum_probs=201.5
Q ss_pred Ccc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEE
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~l 1202 (1553)
.|+ .+|.....+.||++.|+++.||.||.++|||.-+|.|+||+..++. ....+......|.-+.|+|-++.|
T Consensus 90 lW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~------~~~~~~~e~~dieWl~WHp~a~il 163 (399)
T KOG0296|consen 90 LWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGG------EQWKLDQEVEDIEWLKWHPRAHIL 163 (399)
T ss_pred EEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCc------eEEEeecccCceEEEEecccccEE
Confidence 688 5588999999999999999999999999999999999999999875 233333344558889999999999
Q ss_pred EEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 as~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
++|+.||++.+|.+... ...+...+|...+++=.|.|+ |+.++++..||+|++||+.+++...
T Consensus 164 lAG~~DGsvWmw~ip~~--------------~~~kv~~Gh~~~ct~G~f~pd---GKr~~tgy~dgti~~Wn~ktg~p~~ 226 (399)
T KOG0296|consen 164 LAGSTDGSVWMWQIPSQ--------------ALCKVMSGHNSPCTCGEFIPD---GKRILTGYDDGTIIVWNPKTGQPLH 226 (399)
T ss_pred EeecCCCcEEEEECCCc--------------ceeeEecCCCCCcccccccCC---CceEEEEecCceEEEEecCCCceeE
Confidence 99999999999999731 122334457778888899999 8899999999999999999987665
Q ss_pred eeccC-------------------------------------------------CCCcceEEEEEcCCC---CEEEEEeC
Q 000410 1283 TLKAI-------------------------------------------------PEEGYVSSLVTGPCG---NWFVSGSS 1310 (1553)
Q Consensus 1283 ~l~~~-------------------------------------------------~h~g~Itsl~~sp~g---~~LvsGs~ 1310 (1553)
.+... .+...+.|+.+.|.. ...++|+-
T Consensus 227 ~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~v 306 (399)
T KOG0296|consen 227 KITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSV 306 (399)
T ss_pred EecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccc
Confidence 55410 001112233333322 45688999
Q ss_pred CCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCC
Q 000410 1311 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1390 (1553)
Q Consensus 1311 dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~ 1390 (1553)
||+|.|||+.....-.... |..+|.++.| .+ ..++++++.+|.|+.||.++|+++.++.++
T Consensus 307 dG~i~iyD~a~~~~R~~c~--he~~V~~l~w-~~----------t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH------ 367 (399)
T KOG0296|consen 307 DGTIAIYDLAASTLRHICE--HEDGVTKLKW-LN----------TDYLLTACANGKVRQWDARTGQLKFTYTGH------ 367 (399)
T ss_pred cceEEEEecccchhheecc--CCCceEEEEE-cC----------cchheeeccCceEEeeeccccceEEEEecC------
Confidence 9999999998777666555 4456999988 43 247999999999999999999999998744
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCC
Q 000410 1391 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1391 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~ 1461 (1553)
..+|.+++.+|++ +++|+|.|++.+++++.
T Consensus 368 -----------------------------------------~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 368 -----------------------------------------QMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred -----------------------------------------chheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 3479999999998 56699999999999864
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-21 Score=262.15 Aligned_cols=278 Identities=14% Similarity=0.153 Sum_probs=203.1
Q ss_pred CCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecc
Q 000410 1160 DSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD 1239 (1553)
Q Consensus 1160 DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~ 1239 (1553)
+|.+++|+..+.......+ ......|.+.|++++|+++++.+|+|+.||+|+||+...... .+....+ .. ..
T Consensus 457 ~gl~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~-~~~~~~~----~~--~~ 528 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLK-QGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIK-DGRDIHY----PV--VE 528 (793)
T ss_pred hhhhhhhcccceEEEEeec-cccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccc-ccccccc----ce--EE
Confidence 6778888887654211111 112345788899999999999999999999999999853110 0000000 01 11
Q ss_pred cCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcC-CCCEEEEEeCCCcEEEEe
Q 000410 1240 TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGP-CGNWFVSGSSRGVLTLWD 1318 (1553)
Q Consensus 1240 ~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp-~g~~LvsGs~dG~l~lWD 1318 (1553)
..+...+..++|++.. +.+|++++.||.|++||+.+++.+..+.. |.+.|++++|+| ++.+|++|+.||+|++||
T Consensus 529 ~~~~~~v~~l~~~~~~--~~~las~~~Dg~v~lWd~~~~~~~~~~~~--H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd 604 (793)
T PLN00181 529 LASRSKLSGICWNSYI--KSQVASSNFEGVVQVWDVARSQLVTEMKE--HEKRVWSIDYSSADPTLLASGSDDGSVKLWS 604 (793)
T ss_pred ecccCceeeEEeccCC--CCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence 1223467778898753 45899999999999999999988888765 889999999997 789999999999999999
Q ss_pred CCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcE-EEEEecccCCCCCccCCCcc
Q 000410 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSC-HQVLRTANYDGDTEMSDLPW 1397 (1553)
Q Consensus 1319 lr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~-~~~l~~~~~~~~~~~~~~~~ 1397 (1553)
++.+..+..+.. ...+.++.| .+ .++.++++|+.||.|++||++++.. ...+.
T Consensus 605 ~~~~~~~~~~~~--~~~v~~v~~-~~--------~~g~~latgs~dg~I~iwD~~~~~~~~~~~~--------------- 658 (793)
T PLN00181 605 INQGVSIGTIKT--KANICCVQF-PS--------ESGRSLAFGSADHKVYYYDLRNPKLPLCTMI--------------- 658 (793)
T ss_pred CCCCcEEEEEec--CCCeEEEEE-eC--------CCCCEEEEEeCCCeEEEEECCCCCccceEec---------------
Confidence 999888877764 246777766 22 2356899999999999999986542 22221
Q ss_pred cccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCC
Q 000410 1398 AFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGV 1477 (1553)
Q Consensus 1398 ~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~ 1477 (1553)
+|...|.++.|.++..++||+.|+.|++||+..+.. +.. .
T Consensus 659 --------------------------------~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~-----~~~--~- 698 (793)
T PLN00181 659 --------------------------------GHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSIS-----GIN--E- 698 (793)
T ss_pred --------------------------------CCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCcc-----ccC--C-
Confidence 233478999998666899999999999999874321 000 0
Q ss_pred CCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1478 GNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1478 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
. ......+|...|+.+ .|++++.+|++|+.||.|+||+
T Consensus 699 --~-----------------------------------~l~~~~gh~~~i~~v-~~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 699 --T-----------------------------------PLHSFMGHTNVKNFV-GLSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred --c-----------------------------------ceEEEcCCCCCeeEE-EEcCCCCEEEEEeCCCEEEEEE
Confidence 0 000123488899999 6999999999999999999995
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-22 Score=225.46 Aligned_cols=198 Identities=26% Similarity=0.298 Sum_probs=166.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|.+.+.||.|+++.||++.+.+ ..+++|.+...... ...+.+.+|.+.++.++|+|++++++++......++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 76 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE----KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVM 76 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch----HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEE
Confidence 4678999999999999999975 67999999765221 24567788889999999999999999999989999999
Q ss_pred ccccC-CHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFFN-SLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~g-sL~d~l~~~~~-l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||+++ +|.+++..... +++..+..++.|++.+|.+||++|++|+||+|.||+++.++.++|+|||.+.....+.. .
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--~ 154 (225)
T smart00221 77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--A 154 (225)
T ss_pred eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc--c
Confidence 99996 99999987666 89999999999999999999999999999999999999999999999998876533220 0
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL 243 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~ 243 (1553)
......++..|++||.+. ....++.++|+|++|+++++|++|++||+.
T Consensus 155 ----~~~~~~~~~~~~~pe~~~---------~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ----LLKTVKGTPFYLAPEVLL---------GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccceeccCCcCCHhHhc---------CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 112234567799999763 234667799999999999999999999976
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-22 Score=210.06 Aligned_cols=288 Identities=16% Similarity=0.211 Sum_probs=208.3
Q ss_pred CCCCCCcccccCCCCCCccc-CccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecC
Q 000410 1108 LTGLPSFVRTSSIPDSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLE 1186 (1553)
Q Consensus 1108 ~~g~~~~~~~~~~~~~~W~p-~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h 1186 (1553)
.+|.-.|..+....+..|.. .|..+.++.||+++|+||..+.+.+.++|||+|.++|+||+.++. ...++..
T Consensus 20 ~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk------~la~~k~- 92 (327)
T KOG0643|consen 20 REGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGK------QLATWKT- 92 (327)
T ss_pred CCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCc------EEEEeec-
Confidence 34444444443445678984 899999999999999999999999999999999999999999986 3333333
Q ss_pred CCceEEEEEecCCcEEEEEeCC-----CcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEE
Q 000410 1187 GSRALCTMMLRHSAQVVVGACD-----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMF 1261 (1553)
Q Consensus 1187 ~~~I~~l~f~~~~~~las~s~D-----G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l 1261 (1553)
...|..+.|+.+|+.++.++++ +.|.++|++.... .......+.+....+ ..+..+-|.|- ++.|
T Consensus 93 ~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~------~~~s~ep~~kI~t~~-skit~a~Wg~l---~~~i 162 (327)
T KOG0643|consen 93 NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSS------DIDSEEPYLKIPTPD-SKITSALWGPL---GETI 162 (327)
T ss_pred CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChh------hhcccCceEEecCCc-cceeeeeeccc---CCEE
Confidence 3459999999999998887765 6799999973221 011111233333333 45566679998 7799
Q ss_pred EEEeCCceEEEEeCCCCccc-ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEE
Q 000410 1262 MYSTQNCGIHLWDTRSNSNT-WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1340 (1553)
Q Consensus 1262 ~~~s~dg~I~iwDlrt~~~~-~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~ 1340 (1553)
++|..+|.|..||+++|... ..-+. |...|+++++++|..++++|+.|.+-++||.++...++++.. ..|+++..
T Consensus 163 i~Ghe~G~is~~da~~g~~~v~s~~~--h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t--e~PvN~aa 238 (327)
T KOG0643|consen 163 IAGHEDGSISIYDARTGKELVDSDEE--HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT--ERPVNTAA 238 (327)
T ss_pred EEecCCCcEEEEEcccCceeeechhh--hccccccccccCCcceEEecccCccceeeeccceeeEEEeee--ccccccee
Confidence 99999999999999998543 44443 777999999999999999999999999999999999998875 45777777
Q ss_pred eecCCCCCccccCCCCEEEEEEcCCe--EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccc
Q 000410 1341 LFVPPPNAAVSTTARPLIYVAAGCNE--VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQ 1418 (1553)
Q Consensus 1341 ~~~p~~~~~~~s~~~~~l~s~s~dg~--V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 1418 (1553)
+ .|.. ..++.|++... |+-=+.+.|+ |. .+.-.
T Consensus 239 i-sP~~---------d~VilgGGqeA~dVTTT~~r~GK----FE-------------------------------ArFyh 273 (327)
T KOG0643|consen 239 I-SPLL---------DHVILGGGQEAMDVTTTSTRAGK----FE-------------------------------ARFYH 273 (327)
T ss_pred c-cccc---------ceEEecCCceeeeeeeecccccc----hh-------------------------------hhHHH
Confidence 7 5544 35666655321 2211111111 00 00001
Q ss_pred cccccccCCCCCCccCcEEeccCCCCeEE-EccCCCeEEEEeCC
Q 000410 1419 KYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1419 ~~~~~~l~~~~~~~~~V~sl~~sp~g~ll-Tgg~Dg~IrlWDl~ 1461 (1553)
..-.+++....+|-++|++++|+|+|... +||.||.||+.-+.
T Consensus 274 ~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 274 LIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred HHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 11124555667888899999999999655 99999999998654
|
|
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-20 Score=204.94 Aligned_cols=260 Identities=17% Similarity=0.236 Sum_probs=201.7
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeC--CC
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC--DG 1209 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~--DG 1209 (1553)
.+.|.+-.+.|+++.|+++|.++++++.|.+++|+|+.++. ...+...+...+..++|....+.++.++. |.
T Consensus 7 ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~------~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~ 80 (311)
T KOG1446|consen 7 AKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK------QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDD 80 (311)
T ss_pred ccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc------eeeEeecccccccEEEEecCCceEEEccCCCCC
Confidence 44566677899999999999999999999999999999876 23344445445888999888888888876 88
Q ss_pred cEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
+||..++.+ ....++..+|...|..++.+|. +..+++++.|++|++||+|..+|...+..
T Consensus 81 tIryLsl~d--------------NkylRYF~GH~~~V~sL~~sP~---~d~FlS~S~D~tvrLWDlR~~~cqg~l~~--- 140 (311)
T KOG1446|consen 81 TIRYLSLHD--------------NKYLRYFPGHKKRVNSLSVSPK---DDTFLSSSLDKTVRLWDLRVKKCQGLLNL--- 140 (311)
T ss_pred ceEEEEeec--------------CceEEEcCCCCceEEEEEecCC---CCeEEecccCCeEEeeEecCCCCceEEec---
Confidence 999999874 1345677889999999999998 56999999999999999999888777654
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--cccceeecc--ccCCcceEEeecCCCCCccccCCCCEEEEEEcCC
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL--VPVNSWQYS--QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~--~~l~s~~~~--~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg 1365 (1553)
..-...+|||.|-.+++|...+.|+++|+|.. .+..++... .....+ .+.|+++|+.++.+...+
T Consensus 141 -~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~----------~l~FS~dGK~iLlsT~~s 209 (311)
T KOG1446|consen 141 -SGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWT----------DLEFSPDGKSILLSTNAS 209 (311)
T ss_pred -CCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCcccee----------eeEEcCCCCEEEEEeCCC
Confidence 23446799999999999998889999999953 333333332 112233 344577788999999999
Q ss_pred eEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-
Q 000410 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG- 1444 (1553)
Q Consensus 1366 ~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g- 1444 (1553)
.+.+.|.-+|..+..+........ .--+..|.|++
T Consensus 210 ~~~~lDAf~G~~~~tfs~~~~~~~--------------------------------------------~~~~a~ftPds~ 245 (311)
T KOG1446|consen 210 FIYLLDAFDGTVKSTFSGYPNAGN--------------------------------------------LPLSATFTPDSK 245 (311)
T ss_pred cEEEEEccCCcEeeeEeeccCCCC--------------------------------------------cceeEEECCCCc
Confidence 999999999998777764322110 01355678999
Q ss_pred eEEEccCCCeEEEEeCCCCCCceEEeCC
Q 000410 1445 DLLTGGTDLKIRRWDHCSPGRSYCICGP 1472 (1553)
Q Consensus 1445 ~llTgg~Dg~IrlWDl~~~~~s~~~~g~ 1472 (1553)
++++|++||+|.+|+++++.......|+
T Consensus 246 Fvl~gs~dg~i~vw~~~tg~~v~~~~~~ 273 (311)
T KOG1446|consen 246 FVLSGSDDGTIHVWNLETGKKVAVLRGP 273 (311)
T ss_pred EEEEecCCCcEEEEEcCCCcEeeEecCC
Confidence 6779999999999999888776655553
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-21 Score=241.64 Aligned_cols=299 Identities=15% Similarity=0.199 Sum_probs=220.6
Q ss_pred ccCeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCc-----cccc-cccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1139 CSAVNEIAISHDHSFFVSAS--DDSTVKVWDSRKLE-----KDIS-FRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1139 ~~~V~~l~~spd~~~laSgS--~DGtVkIWD~~~~~-----~~~~-~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
...|.+|.++|||..||||+ .||.++||+.+... ++.. .+..++...|.+.|+|+.|+++|.+||+||+|+.
T Consensus 13 ~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~ 92 (942)
T KOG0973|consen 13 EKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRL 92 (942)
T ss_pred CeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcce
Confidence 46799999999999999999 99999999976422 2222 3456677889999999999999999999999999
Q ss_pred EEEEEeeecccCCCccccc-ccc-----ccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccccee
Q 000410 1211 IHMFSVDHISRGLGNVEKY-SGI-----SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
|.||+.... +.+...+- .+. ........+|..-|..++|+|+ +.++++++.|++|.+||.++.+.+.++
T Consensus 93 v~iW~~~~~--~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~---~~~lvS~s~DnsViiwn~~tF~~~~vl 167 (942)
T KOG0973|consen 93 VMIWERAEI--GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD---DSLLVSVSLDNSVIIWNAKTFELLKVL 167 (942)
T ss_pred EEEeeeccc--CCcccccccccccccceeeEEEEEecCCCccceeccCCC---ccEEEEecccceEEEEccccceeeeee
Confidence 999998731 11111111 011 1122233457777888899998 679999999999999999999999999
Q ss_pred ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccC-----CcceEEeecCCCCCccccCCCCEEE
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-----PIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1285 ~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~-----~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
.. |++.|-.+.|||-|++|++-+.|++|++|++......+++..+... ...++.| +|+|.+++
T Consensus 168 ~~--H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSW----------SPDG~~la 235 (942)
T KOG0973|consen 168 RG--HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSW----------SPDGHHLA 235 (942)
T ss_pred ec--ccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeeccc----------CCCcCeec
Confidence 87 9999999999999999999999999999997776666666554332 2344444 45667887
Q ss_pred EEEc----CCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCc
Q 000410 1360 VAAG----CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1360 s~s~----dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
++.+ -..+.|.+-.+.++-.-|.+|.. ++
T Consensus 236 s~nA~n~~~~~~~IieR~tWk~~~~LvGH~~-----------------------------------------------p~ 268 (942)
T KOG0973|consen 236 SPNAVNGGKSTIAIIERGTWKVDKDLVGHSA-----------------------------------------------PV 268 (942)
T ss_pred chhhccCCcceeEEEecCCceeeeeeecCCC-----------------------------------------------ce
Confidence 7743 23466666655555555544333 34
Q ss_pred EEeccCC---------------C---CeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEee
Q 000410 1436 RSLLPLP---------------G---GDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQER 1497 (1553)
Q Consensus 1436 ~sl~~sp---------------~---g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 1497 (1553)
.+++|+| + ..+++||.|+.|-+|....++..+++...
T Consensus 269 evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l------------------------- 323 (942)
T KOG0973|consen 269 EVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL------------------------- 323 (942)
T ss_pred EEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh-------------------------
Confidence 4444433 0 13558999999999998765444332210
Q ss_pred ecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1498 KRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1498 ~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
-..+|.|+ .|+++|--|..||.||+|.+.
T Consensus 324 -------------------------f~~SI~Dm-sWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 324 -------------------------FNKSIVDM-SWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred -------------------------hcCceeee-eEcCCCCeEEEEecCCeEEEE
Confidence 23579999 899999999999999999875
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.7e-22 Score=229.72 Aligned_cols=256 Identities=16% Similarity=0.273 Sum_probs=197.8
Q ss_pred CCcc--cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC-
Q 000410 1123 SGWR--PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS- 1199 (1553)
Q Consensus 1123 ~~W~--p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~- 1199 (1553)
..|+ ..|.|+.++.||..+|.+++|+++|..|.|||.|+++|+||+++|.. ...+.. +..++|+.|.|++
T Consensus 240 klW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~------~~~f~~-~~~~~cvkf~pd~~ 312 (503)
T KOG0282|consen 240 KLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQV------LSRFHL-DKVPTCVKFHPDNQ 312 (503)
T ss_pred EEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceE------EEEEec-CCCceeeecCCCCC
Confidence 3687 45899999999999999999999999999999999999999999873 223322 2358999999987
Q ss_pred cEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1279 (1553)
Q Consensus 1200 ~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~ 1279 (1553)
+.|++|+.|+.|+.||+++ + .+......|-..+..+.|-++ +..+++++.|+++++|+.+.+-
T Consensus 313 n~fl~G~sd~ki~~wDiRs-----~---------kvvqeYd~hLg~i~~i~F~~~---g~rFissSDdks~riWe~~~~v 375 (503)
T KOG0282|consen 313 NIFLVGGSDKKIRQWDIRS-----G---------KVVQEYDRHLGAILDITFVDE---GRRFISSSDDKSVRIWENRIPV 375 (503)
T ss_pred cEEEEecCCCcEEEEeccc-----h---------HHHHHHHhhhhheeeeEEccC---CceEeeeccCccEEEEEcCCCc
Confidence 8899999999999999984 1 111122234456778889998 7899999999999999999887
Q ss_pred ccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccc---ceeeccccCCcceEEeecCCCCCccccCCCC
Q 000410 1280 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPV---NSWQYSQVCPIEKMCLFVPPPNAAVSTTARP 1356 (1553)
Q Consensus 1280 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l---~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~ 1356 (1553)
.+.-.. ..+.....|+..+|++.|++.-+.|..+-++.+...-.. +.+. .|..+ .....+.|+++|.
T Consensus 376 ~ik~i~-~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~fe-Gh~va--------Gys~~v~fSpDG~ 445 (503)
T KOG0282|consen 376 PIKNIA-DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFE-GHSVA--------GYSCQVDFSPDGR 445 (503)
T ss_pred cchhhc-chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhc-ceecc--------CceeeEEEcCCCC
Confidence 665333 234556889999999999999999999999986533222 1111 12211 1222345677889
Q ss_pred EEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcE
Q 000410 1357 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1436 (1553)
Q Consensus 1357 ~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1436 (1553)
+|++|.++|.+.+||..+.+....+.. |...+.
T Consensus 446 ~l~SGdsdG~v~~wdwkt~kl~~~lka-----------------------------------------------h~~~ci 478 (503)
T KOG0282|consen 446 TLCSGDSDGKVNFWDWKTTKLVSKLKA-----------------------------------------------HDQPCI 478 (503)
T ss_pred eEEeecCCccEEEeechhhhhhhcccc-----------------------------------------------CCcceE
Confidence 999999999999999987665444432 233688
Q ss_pred EeccCCCC--eEEEccCCCeEEEEe
Q 000410 1437 SLLPLPGG--DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1437 sl~~sp~g--~llTgg~Dg~IrlWD 1459 (1553)
.+.|+|.. .++|||.||.|++||
T Consensus 479 ~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 479 GVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEEecCCCcceeEecccCceeEecC
Confidence 89999976 899999999999997
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.6e-22 Score=208.54 Aligned_cols=243 Identities=15% Similarity=0.241 Sum_probs=192.0
Q ss_pred cccCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec-CCcEEEEEeCCCcEEEEE
Q 000410 1138 HCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGIIHMFS 1215 (1553)
Q Consensus 1138 H~~~V~~l~~spd~~-~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~-~~~~las~s~DG~I~vwd 1215 (1553)
-.+++..++|++... .+++|+.||+++|||..... .+...++.|...|.++.|.+ .++.++++|.||+|++|+
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s-----~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~ 133 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS-----KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWD 133 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCC-----cchhHHHhhhhheEEeccccccceeEEeeccCCceEeec
Confidence 457899999998764 89999999999999965443 36667889999999999998 567788999999999999
Q ss_pred eeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEE
Q 000410 1216 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1295 (1553)
Q Consensus 1216 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1295 (1553)
.+... .+. ...+|..+|....|+|.. ++++++++.||.+++||+|....-..++. |...|.|
T Consensus 134 ~~r~~-------------Sv~-Tf~gh~~~Iy~a~~sp~~--~nlfas~Sgd~~l~lwdvr~~gk~~~i~a--h~~Eil~ 195 (311)
T KOG0277|consen 134 PNRPN-------------SVQ-TFNGHNSCIYQAAFSPHI--PNLFASASGDGTLRLWDVRSPGKFMSIEA--HNSEILC 195 (311)
T ss_pred CCCCc-------------ceE-eecCCccEEEEEecCCCC--CCeEEEccCCceEEEEEecCCCceeEEEe--ccceeEe
Confidence 86311 112 244578899999999986 55999999999999999998654444554 7788999
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEeCCCC-cccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcC
Q 000410 1296 LVTGP-CGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1373 (1553)
Q Consensus 1296 l~~sp-~g~~LvsGs~dG~l~lWDlr~~-~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~ 1373 (1553)
+.|+. +.+.|++|+.|+.|++||+|.. .++..+ ..|.-.|.++.+ +|... ..+++++.|-+++|||.+
T Consensus 196 cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL-~gh~~AVRkvk~-Sph~~--------~lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 196 CDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL-NGHGLAVRKVKF-SPHHA--------SLLASASYDMTVRIWDPE 265 (311)
T ss_pred ecccccCCcEEEecCCCceEEEEehhhccccceee-cCCceEEEEEec-Ccchh--------hHhhhccccceEEecccc
Confidence 99997 5688999999999999999975 455555 457778999998 77653 478999999999999998
Q ss_pred CCc-EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC--CCeEEEcc
Q 000410 1374 NGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP--GGDLLTGG 1450 (1553)
Q Consensus 1374 tg~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp--~g~llTgg 1450 (1553)
.++ +++++. -|...|..+.|++ .+.++++|
T Consensus 266 ~~ds~~e~~~-----------------------------------------------~HtEFv~g~Dws~~~~~~vAs~g 298 (311)
T KOG0277|consen 266 RQDSAIETVD-----------------------------------------------HHTEFVCGLDWSLFDPGQVASTG 298 (311)
T ss_pred cchhhhhhhh-----------------------------------------------ccceEEeccccccccCceeeecc
Confidence 553 222221 1223577777776 35899999
Q ss_pred CCCeEEEEeC
Q 000410 1451 TDLKIRRWDH 1460 (1553)
Q Consensus 1451 ~Dg~IrlWDl 1460 (1553)
+|..+.+|+-
T Consensus 299 WDe~l~Vw~p 308 (311)
T KOG0277|consen 299 WDELLYVWNP 308 (311)
T ss_pred cccceeeecc
Confidence 9999999983
|
|
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.1e-22 Score=211.22 Aligned_cols=307 Identities=15% Similarity=0.184 Sum_probs=227.5
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D 1208 (1553)
.+++..|.||++.|..++.......+.|+|.|.|.+||.++++. +..+|.+|.+.|+|++|++.+..+++++.|
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~------CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD 211 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGA------CLATYTGHTGSVNSIKFHNSGLLLLTASGD 211 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecccc------ceeeecccccceeeEEeccccceEEEccCC
Confidence 45889999999999999998777799999999999999999886 788999999999999999999999999999
Q ss_pred CcEEEEEee------ecccCCCc-----c------ccc------cccccce---ecccCCCcEEEEEEecCCCCcceEEE
Q 000410 1209 GIIHMFSVD------HISRGLGN-----V------EKY------SGISDIK---KKDTKEGAIVTLVNYNTDNCASHMFM 1262 (1553)
Q Consensus 1209 G~I~vwdi~------~~~~~~~~-----~------~~~------~~~~~~~---~~~~~~~~~v~~~~~~~~~~s~~~l~ 1262 (1553)
++.+||... ......+. . .+. ..-..++ ....+|..+|.+..|-.. ++.++
T Consensus 212 ~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g---g~Q~v 288 (481)
T KOG0300|consen 212 ETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG---GQQMV 288 (481)
T ss_pred cchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcC---cceee
Confidence 999999832 10000000 0 000 0001122 122356777877788777 77999
Q ss_pred EEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEee
Q 000410 1263 YSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLF 1342 (1553)
Q Consensus 1263 ~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~ 1342 (1553)
++++|.+-.+||+.+++.+..+.+ |....+-++-+|..+.+++.+.|-+.++||+|....--..-.+|...|++..|
T Consensus 289 TaSWDRTAnlwDVEtge~v~~LtG--Hd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF- 365 (481)
T KOG0300|consen 289 TASWDRTANLWDVETGEVVNILTG--HDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF- 365 (481)
T ss_pred eeeccccceeeeeccCceeccccC--cchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE-
Confidence 999999999999999999999987 88889999999999999999999999999999654433333346667887777
Q ss_pred cCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCc-EEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccc
Q 000410 1343 VPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYR 1421 (1553)
Q Consensus 1343 ~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 1421 (1553)
.- +..+++|+.|.+|+|||+++.. .+.+++..
T Consensus 366 ~~----------dd~vVSgSDDrTvKvWdLrNMRsplATIRtd------------------------------------- 398 (481)
T KOG0300|consen 366 NT----------DDRVVSGSDDRTVKVWDLRNMRSPLATIRTD------------------------------------- 398 (481)
T ss_pred ec----------CCceeecCCCceEEEeeeccccCcceeeecC-------------------------------------
Confidence 22 3358999999999999998653 22222211
Q ss_pred ccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecC
Q 000410 1422 VDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQ 1500 (1553)
Q Consensus 1422 ~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 1500 (1553)
..++-++.+.++ .|+.--+.+.||+||+......+.
T Consensus 399 -----------S~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRl-------------------------------- 435 (481)
T KOG0300|consen 399 -----------SPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARL-------------------------------- 435 (481)
T ss_pred -----------CccceeEeecCCceEEeccCCceEEEEecCCCccccC--------------------------------
Confidence 135556666666 444677789999999863322110
Q ss_pred CcchhhhHHHHHhhhhcCccCCCccceeEEeeeec--CCcEEEEEcCCceEEEcC
Q 000410 1501 PLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKL--NQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1501 ~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~--~~~~LvSas~DG~IkVWk 1553 (1553)
| ...-.||...|+|+| |.. +-.-|.||+-|..+.=|+
T Consensus 436 P---------------rtsRqgHrRMV~c~A-W~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 436 P---------------RTSRQGHRRMVTCCA-WLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred C---------------cccccccceeeeeee-ccccCcccccccccccceeeeeE
Confidence 0 001236999999995 543 356699999999998885
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.6e-23 Score=226.48 Aligned_cols=247 Identities=18% Similarity=0.186 Sum_probs=192.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-EeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQ-ETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~-~~~ 97 (1553)
+++....+-+|.||.||+|.+.+ +.|.+|.++... .+-....+..|.-.+..+.|||++++.++. ++.
T Consensus 285 Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A----S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 285 RVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA----SQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred heechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc----cHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 45666678899999999996643 346677664331 122334556666678888999999998876 445
Q ss_pred CEEEEEecccc-CCHHHHhc-----CC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 98 KAAYLLRQYFF-NSLRDRLS-----TP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~-----~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
...+++..+.. |+|..++. +. ..++..+...++.|++.|++|||++||+|.||...|.+|++.-+|||+|=
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccc
Confidence 56788889998 89999986 21 23788899999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH--
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH-- 245 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~-- 245 (1553)
.+++.. -|.++...-+...+...||+||-+. ...|+.++|+||||+++|||+| |+.||..-+
T Consensus 441 aLSRDL-----FP~DYhcLGDnEnRPvkWMslEal~----------n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 441 ALSRDL-----FPGDYHCLGDNENRPVKWMSLEALQ----------NSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred hhcccc-----CcccccccCCCCCCcccccCHHHHh----------hhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 998866 3445555545556677899999664 5578999999999999999998 588885443
Q ss_pred -HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 246 -LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+..|.+..++.. .+...++++..++.-||..+|++||+.+|+..-+
T Consensus 506 Em~~ylkdGyRla--QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 506 EMEHYLKDGYRLA--QPFNCPDELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred HHHHHHhccceec--CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 344555555433 2334557899999999999999999999998754
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=230.16 Aligned_cols=244 Identities=15% Similarity=0.283 Sum_probs=200.4
Q ss_pred eeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEE
Q 000410 1182 TYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMF 1261 (1553)
Q Consensus 1182 ~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l 1261 (1553)
++..++.+|.|+.|+|..-.++++-.+|.|+||+.++.. .++.... ...+|....|-+. .+.+
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt-------------mVksfeV-~~~PvRa~kfiaR---knWi 70 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT-------------MVKSFEV-SEVPVRAAKFIAR---KNWI 70 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccce-------------eeeeeee-cccchhhheeeec---cceE
Confidence 344578899999999999999999999999999998511 1111111 2335555667666 6699
Q ss_pred EEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cccceeeccccCCcceEE
Q 000410 1262 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMC 1340 (1553)
Q Consensus 1262 ~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~-~~l~s~~~~~~~~I~~l~ 1340 (1553)
++|+.|..|++|+..|++.+.+++. |.+.|+|++++|...+++++|.|-+|++||.... .+..+++. |..-|.+++
T Consensus 71 v~GsDD~~IrVfnynt~ekV~~FeA--H~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeG-H~HyVMqv~ 147 (794)
T KOG0276|consen 71 VTGSDDMQIRVFNYNTGEKVKTFEA--HSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEG-HEHYVMQVA 147 (794)
T ss_pred EEecCCceEEEEecccceeeEEeec--cccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcC-cceEEEEEE
Confidence 9999999999999999999999987 9999999999999999999999999999998754 34445543 566788888
Q ss_pred eecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccc
Q 000410 1341 LFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKY 1420 (1553)
Q Consensus 1341 ~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 1420 (1553)
+ .|.. .+.+++++-|++|+||.+....|-.++.
T Consensus 148 f-nPkD--------~ntFaS~sLDrTVKVWslgs~~~nfTl~-------------------------------------- 180 (794)
T KOG0276|consen 148 F-NPKD--------PNTFASASLDRTVKVWSLGSPHPNFTLE-------------------------------------- 180 (794)
T ss_pred e-cCCC--------ccceeeeeccccEEEEEcCCCCCceeee--------------------------------------
Confidence 8 6643 3579999999999999998877766665
Q ss_pred cccccCCCCCCccCcEEeccCCCC---eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEee
Q 000410 1421 RVDELNEPPPRLLGIRSLLPLPGG---DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQER 1497 (1553)
Q Consensus 1421 ~~~~l~~~~~~~~~V~sl~~sp~g---~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 1497 (1553)
+|..+|+|+.+-+.| .|+||++|..|++||.++..+..++.
T Consensus 181 ---------gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLe--------------------------- 224 (794)
T KOG0276|consen 181 ---------GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLE--------------------------- 224 (794)
T ss_pred ---------ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhh---------------------------
Confidence 344489999998887 89999999999999998776655443
Q ss_pred ecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1498 KRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1498 ~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
||..-|+.+ +|+|.-++++|||.||+||||.
T Consensus 225 ------------------------GHt~Nvs~v-~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 225 ------------------------GHTNNVSFV-FFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred ------------------------cccccceEE-EecCCCcEEEEecCCccEEEec
Confidence 488999999 8999999999999999999994
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-21 Score=215.31 Aligned_cols=284 Identities=17% Similarity=0.202 Sum_probs=228.2
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeec
Q 000410 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1219 (1553)
Q Consensus 1140 ~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~ 1219 (1553)
..|+++...|...++.||+.|.++-++|..+.. ...++.+|...|+++.|+++...+++++.|..|+||.+...
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q------~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQ------ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS 293 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhh------hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccc
Confidence 468888888887899999999999999988654 56689999999999999999999999999999999998631
Q ss_pred ccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEc
Q 000410 1220 SRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTG 1299 (1553)
Q Consensus 1220 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~s 1299 (1553)
+ .......|..+|..+..+|. |.+|+++++||+..+.|++++.+..........-.++|.+|+
T Consensus 294 s--------------~~~~~~~h~~~V~~ls~h~t---geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH 356 (506)
T KOG0289|consen 294 S--------------EPTSSRPHEEPVTGLSLHPT---GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFH 356 (506)
T ss_pred c--------------CccccccccccceeeeeccC---CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEc
Confidence 1 11223356788899999998 789999999999999999999987665542233459999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEE
Q 000410 1300 PCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQ 1379 (1553)
Q Consensus 1300 p~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~ 1379 (1553)
|||..|.+|+.||.|++||+..+..+..+.. |.++|..+.| +.+|.|+++++.|++|++||+++.+..+
T Consensus 357 pDgLifgtgt~d~~vkiwdlks~~~~a~Fpg-ht~~vk~i~F----------sENGY~Lat~add~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 357 PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPG-HTGPVKAISF----------SENGYWLATAADDGSVKLWDLRKLKNFK 425 (506)
T ss_pred CCceEEeccCCCceEEEEEcCCccccccCCC-CCCceeEEEe----------ccCceEEEEEecCCeEEEEEehhhcccc
Confidence 9999999999999999999999998888776 7889998887 4568999999999999999999877555
Q ss_pred EEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEE
Q 000410 1380 VLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRW 1458 (1553)
Q Consensus 1380 ~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlW 1458 (1553)
++..... .+|.++.|.+.| +|+.+|.|=+|+++
T Consensus 426 t~~l~~~----------------------------------------------~~v~s~~fD~SGt~L~~~g~~l~Vy~~ 459 (506)
T KOG0289|consen 426 TIQLDEK----------------------------------------------KEVNSLSFDQSGTYLGIAGSDLQVYIC 459 (506)
T ss_pred eeecccc----------------------------------------------ccceeEEEcCCCCeEEeecceeEEEEE
Confidence 5442111 158899999988 56688999888888
Q ss_pred eCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCc
Q 000410 1459 DHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQR 1538 (1553)
Q Consensus 1459 Dl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~ 1538 (1553)
+-.+.+-..+.. ..-|.+..+.+ .|....+
T Consensus 460 ~k~~k~W~~~~~-------------------------------------------------~~~~sg~st~v-~Fg~~aq 489 (506)
T KOG0289|consen 460 KKKTKSWTEIKE-------------------------------------------------LADHSGLSTGV-RFGEHAQ 489 (506)
T ss_pred ecccccceeeeh-------------------------------------------------hhhccccccee-eecccce
Confidence 754332221111 11166677777 7888899
Q ss_pred EEEEEcCCceEEEcC
Q 000410 1539 LLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1539 ~LvSas~DG~IkVWk 1553 (1553)
+++++|.|...+|+.
T Consensus 490 ~l~s~smd~~l~~~a 504 (506)
T KOG0289|consen 490 YLASTSMDAILRLYA 504 (506)
T ss_pred EEeeccchhheEEee
Confidence 999999999998863
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.5e-21 Score=219.71 Aligned_cols=275 Identities=19% Similarity=0.310 Sum_probs=208.0
Q ss_pred cCeeEEEEcCCCC--EEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEee
Q 000410 1140 SAVNEIAISHDHS--FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVD 1217 (1553)
Q Consensus 1140 ~~V~~l~~spd~~--~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~ 1217 (1553)
++|++++|+|.+. +.+|+| -.|.|++..+.. ...++..-...+.+++|..+|..+++|...|.|+|||+.
T Consensus 27 ~~vssl~fsp~~P~d~aVt~S--~rvqly~~~~~~------~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k 98 (487)
T KOG0310|consen 27 NSVSSLCFSPKHPYDFAVTSS--VRVQLYSSVTRS------VRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK 98 (487)
T ss_pred CcceeEecCCCCCCceEEecc--cEEEEEecchhh------hhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccc
Confidence 6899999999664 555555 479999987654 222222333459999999999999999999999999964
Q ss_pred ecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEE
Q 000410 1218 HISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLV 1297 (1553)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~ 1297 (1553)
+ ..+......|..++....|+|.+ +.++++|+.|+.++.||+.+......+. +|.+.|.|.+
T Consensus 99 ~--------------r~iLR~~~ah~apv~~~~f~~~d--~t~l~s~sDd~v~k~~d~s~a~v~~~l~--~htDYVR~g~ 160 (487)
T KOG0310|consen 99 S--------------RVILRQLYAHQAPVHVTKFSPQD--NTMLVSGSDDKVVKYWDLSTAYVQAELS--GHTDYVRCGD 160 (487)
T ss_pred c--------------HHHHHHHhhccCceeEEEecccC--CeEEEecCCCceEEEEEcCCcEEEEEec--CCcceeEeec
Confidence 2 12333445688899999999985 6699999999999999999988644554 4999999999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCc
Q 000410 1298 TGPC-GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS 1376 (1553)
Q Consensus 1298 ~sp~-g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~ 1376 (1553)
|+|- +..+++|+.||.|++||+|... -......|..||..+++ -|.+. .+++++ .+.|+|||+-+|.
T Consensus 161 ~~~~~~hivvtGsYDg~vrl~DtR~~~-~~v~elnhg~pVe~vl~-lpsgs---------~iasAg-Gn~vkVWDl~~G~ 228 (487)
T KOG0310|consen 161 ISPANDHIVVTGSYDGKVRLWDTRSLT-SRVVELNHGCPVESVLA-LPSGS---------LIASAG-GNSVKVWDLTTGG 228 (487)
T ss_pred cccCCCeEEEecCCCceEEEEEeccCC-ceeEEecCCCceeeEEE-cCCCC---------EEEEcC-CCeEEEEEecCCc
Confidence 9995 4689999999999999999885 34444556789999988 66543 555554 5579999998664
Q ss_pred EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeE
Q 000410 1377 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKI 1455 (1553)
Q Consensus 1377 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~I 1455 (1553)
..-+. ...|.-.|+|+++..++ +|+|||-||.+
T Consensus 229 qll~~----------------------------------------------~~~H~KtVTcL~l~s~~~rLlS~sLD~~V 262 (487)
T KOG0310|consen 229 QLLTS----------------------------------------------MFNHNKTVTCLRLASDSTRLLSGSLDRHV 262 (487)
T ss_pred eehhh----------------------------------------------hhcccceEEEEEeecCCceEeecccccce
Confidence 21111 01244579999998877 89999999999
Q ss_pred EEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeec
Q 000410 1456 RRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKL 1535 (1553)
Q Consensus 1456 rlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~ 1535 (1553)
++||+.+-+ ++.+-. -.++|.++ .+++
T Consensus 263 KVfd~t~~K---vv~s~~-------------------------------------------------~~~pvLsi-avs~ 289 (487)
T KOG0310|consen 263 KVFDTTNYK---VVHSWK-------------------------------------------------YPGPVLSI-AVSP 289 (487)
T ss_pred EEEEccceE---EEEeee-------------------------------------------------cccceeeE-EecC
Confidence 999976432 222110 34689999 5788
Q ss_pred CCcEEEEEcCCceEEE
Q 000410 1536 NQRLLISSSRDGAIKV 1551 (1553)
Q Consensus 1536 ~~~~LvSas~DG~IkV 1551 (1553)
+++.++.|..||.+-+
T Consensus 290 dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 290 DDQTVVIGMSNGLVSI 305 (487)
T ss_pred CCceEEEecccceeee
Confidence 8888999999998754
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.88 E-value=6.5e-21 Score=226.82 Aligned_cols=272 Identities=17% Similarity=0.269 Sum_probs=215.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCC
Q 000410 1144 EIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGL 1223 (1553)
Q Consensus 1144 ~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~ 1223 (1553)
=+.|+. ...+|.|. ...|.+|+..++. .......+...|+++.|+++|..|++|..+|.|.|||+...
T Consensus 182 lldWss-~n~laVal-g~~vylW~~~s~~------v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~---- 249 (484)
T KOG0305|consen 182 LLDWSS-ANVLAVAL-GQSVYLWSASSGS------VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ---- 249 (484)
T ss_pred Hhhccc-CCeEEEEe-cceEEEEecCCCc------eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc----
Confidence 355663 33455554 3579999988765 12222333677999999999999999999999999999731
Q ss_pred CccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccce-eccCCCCcceEEEEEcCCC
Q 000410 1224 GNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWT-LKAIPEEGYVSSLVTGPCG 1302 (1553)
Q Consensus 1224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~-l~~~~h~g~Itsl~~sp~g 1302 (1553)
..++.....|...|.+++|+.. .+.+|+.++.|..+|+|..+.... +. +|...|..+.|++|+
T Consensus 250 ---------k~~~~~~~~h~~rvg~laW~~~-----~lssGsr~~~I~~~dvR~~~~~~~~~~--~H~qeVCgLkws~d~ 313 (484)
T KOG0305|consen 250 ---------KKTRTLRGSHASRVGSLAWNSS-----VLSSGSRDGKILNHDVRISQHVVSTLQ--GHRQEVCGLKWSPDG 313 (484)
T ss_pred ---------cccccccCCcCceeEEEeccCc-----eEEEecCCCcEEEEEEecchhhhhhhh--cccceeeeeEECCCC
Confidence 1233344447889999999965 999999999999999999877655 44 488899999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEc--CCeEEEEEcCCCcEEEE
Q 000410 1303 NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG--CNEVSLWNAENGSCHQV 1380 (1553)
Q Consensus 1303 ~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~--dg~V~vWDl~tg~~~~~ 1380 (1553)
++|++|+.|+.+.|||.+...+...+.. |.+.|..+.| +|... ..||+|+| |+.|++||..+|.+...
T Consensus 314 ~~lASGgnDN~~~Iwd~~~~~p~~~~~~-H~aAVKA~aw-cP~q~--------~lLAsGGGs~D~~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 314 NQLASGGNDNVVFIWDGLSPEPKFTFTE-HTAAVKALAW-CPWQS--------GLLATGGGSADRCIKFWNTNTGARIDS 383 (484)
T ss_pred CeeccCCCccceEeccCCCccccEEEec-cceeeeEeee-CCCcc--------CceEEcCCCcccEEEEEEcCCCcEecc
Confidence 9999999999999999987777777665 7788999999 78764 57888876 88999999999987655
Q ss_pred EecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEE--EccCCCeEEE
Q 000410 1381 LRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL--TGGTDLKIRR 1457 (1553)
Q Consensus 1381 l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ll--Tgg~Dg~Irl 1457 (1553)
+... ..|.++.|++.. .|+ -|-.+..|++
T Consensus 384 vdtg------------------------------------------------sQVcsL~Wsk~~kEi~sthG~s~n~i~l 415 (484)
T KOG0305|consen 384 VDTG------------------------------------------------SQVCSLIWSKKYKELLSTHGYSENQITL 415 (484)
T ss_pred cccC------------------------------------------------CceeeEEEcCCCCEEEEecCCCCCcEEE
Confidence 4311 158999999977 455 3555889999
Q ss_pred EeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCC
Q 000410 1458 WDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQ 1537 (1553)
Q Consensus 1458 WDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~ 1537 (1553)
|+..+.+....+. +|...|..+ +++|+|
T Consensus 416 w~~ps~~~~~~l~---------------------------------------------------gH~~RVl~l-a~SPdg 443 (484)
T KOG0305|consen 416 WKYPSMKLVAELL---------------------------------------------------GHTSRVLYL-ALSPDG 443 (484)
T ss_pred Eeccccceeeeec---------------------------------------------------CCcceeEEE-EECCCC
Confidence 9987654433332 499999999 799999
Q ss_pred cEEEEEcCCceEEEcC
Q 000410 1538 RLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1538 ~~LvSas~DG~IkVWk 1553 (1553)
..|+||+.|.++++|+
T Consensus 444 ~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 444 ETIVTGAADETLRFWN 459 (484)
T ss_pred CEEEEecccCcEEecc
Confidence 9999999999999996
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-21 Score=210.40 Aligned_cols=260 Identities=18% Similarity=0.309 Sum_probs=201.1
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1209 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG 1209 (1553)
.++.+|-.|.+.|+++.|+|....|+|||.|+|||++|..+......++ .+ .....|.++.|+|.|..+++|++..
T Consensus 163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K---~~-qd~~~vrsiSfHPsGefllvgTdHp 238 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFK---VF-QDTEPVRSISFHPSGEFLLVGTDHP 238 (430)
T ss_pred ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHH---Hh-hccceeeeEeecCCCceEEEecCCC
Confidence 3789999999999999999999999999999999999998643211111 22 2344699999999999999999999
Q ss_pred cEEEEEeeecccCCCcccccccccccee--cccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKK--KDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
++++||+++.+ ++.. -+.+|...|+++.|++. +++.++|+.||.|++||=-+++|+.++...
T Consensus 239 ~~rlYdv~T~Q-------------cfvsanPd~qht~ai~~V~Ys~t---~~lYvTaSkDG~IklwDGVS~rCv~t~~~A 302 (430)
T KOG0640|consen 239 TLRLYDVNTYQ-------------CFVSANPDDQHTGAITQVRYSST---GSLYVTASKDGAIKLWDGVSNRCVRTIGNA 302 (430)
T ss_pred ceeEEecccee-------------EeeecCcccccccceeEEEecCC---ccEEEEeccCCcEEeeccccHHHHHHHHhh
Confidence 99999998522 1111 23357788999999998 789999999999999999999999999874
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEc-CCe
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG-CNE 1366 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~-dg~ 1366 (1553)
.....|.|..|..+|+++++.+.|.++++|.+.++.++..+.......-.. + ...+.|.....+++.-.. .++
T Consensus 303 H~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~--~----rtqAvFNhtEdyVl~pDEas~s 376 (430)
T KOG0640|consen 303 HGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQK--H----RTQAVFNHTEDYVLFPDEASNS 376 (430)
T ss_pred cCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchh--h----hhhhhhcCccceEEccccccCc
Confidence 445569999999999999999999999999999999999887643221100 0 011223333345544433 567
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-e
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D 1445 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ 1445 (1553)
+--||.+++..+..+. .+|++.++++..+|.+ .
T Consensus 377 lcsWdaRtadr~~l~s----------------------------------------------lgHn~a~R~i~HSP~~p~ 410 (430)
T KOG0640|consen 377 LCSWDARTADRVALLS----------------------------------------------LGHNGAVRWIVHSPVEPA 410 (430)
T ss_pred eeeccccchhhhhhcc----------------------------------------------cCCCCCceEEEeCCCCCc
Confidence 8889988775433322 3566689999999987 7
Q ss_pred EEEccCCCeEEEEeCC
Q 000410 1446 LLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1446 llTgg~Dg~IrlWDl~ 1461 (1553)
++|||.|.++|||--+
T Consensus 411 FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 411 FMTCSDDFRARFWYRR 426 (430)
T ss_pred eeeecccceeeeeeec
Confidence 8899999999999743
|
|
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=203.18 Aligned_cols=307 Identities=15% Similarity=0.231 Sum_probs=203.3
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEE-EeCCC
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV-GACDG 1209 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las-~s~DG 1209 (1553)
.++.|++|++.|++++|+.||++|||++.|++|+|||+++.+...-..-+..... +..+.+.|.|+...+++ +....
T Consensus 78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~--dhpT~V~FapDc~s~vv~~~~g~ 155 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEY--DHPTRVVFAPDCKSVVVSVKRGN 155 (420)
T ss_pred hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccC--CCceEEEECCCcceEEEEEccCC
Confidence 4788999999999999999999999999999999999997652211111222222 23678999999877665 44556
Q ss_pred cEEEEEeeecccCCCccccccccccceecc---cCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceecc
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKD---TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~ 1286 (1553)
++++|....... |. ++ .....++ ......+..+.+...+ .+.+|++++.|..|.+||++ |+.+.++..
T Consensus 156 ~l~vyk~~K~~d--G~---~~--~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~idt 226 (420)
T KOG2096|consen 156 KLCVYKLVKKTD--GS---GS--HHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSIDT 226 (420)
T ss_pred EEEEEEeeeccc--CC---CC--cccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-Cceeeeecc
Confidence 799999874222 11 11 1111111 1122222222232221 16799999999999999999 888777754
Q ss_pred CCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------ccceeec-cccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV------PVNSWQY-SQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1287 ~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~------~l~s~~~-~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
.+..-+..+++|+|+++++++-.--|++|..-|++ ..+.++. +|.+.|+.++| ++ +...++
T Consensus 227 --nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aF-sn---------~S~r~v 294 (420)
T KOG2096|consen 227 --NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAF-SN---------SSTRAV 294 (420)
T ss_pred --ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeee-CC---------CcceeE
Confidence 34456678899999999999998899999875432 2233322 35667777777 44 345799
Q ss_pred EEEcCCeEEEEEcCC----CcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCc
Q 000410 1360 VAAGCNEVSLWNAEN----GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~t----g~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
++|.||..+|||+.- ++-.++++... .|+.... + ..+
T Consensus 295 tvSkDG~wriwdtdVrY~~~qDpk~Lk~g~---------------~pl~aag----------------------~--~p~ 335 (420)
T KOG2096|consen 295 TVSKDGKWRIWDTDVRYEAGQDPKILKEGS---------------APLHAAG----------------------S--EPV 335 (420)
T ss_pred EEecCCcEEEeeccceEecCCCchHhhcCC---------------cchhhcC----------------------C--Cce
Confidence 999999999999752 11111111100 0111100 0 023
Q ss_pred EEeccCCCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhh
Q 000410 1436 RSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAA 1515 (1553)
Q Consensus 1436 ~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 1515 (1553)
-+..+|+|.+++.+....+.++..++++.--.
T Consensus 336 -RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~----------------------------------------------- 367 (420)
T KOG2096|consen 336 -RLELSPSGDSLAVSFGSDLKVFASEDGKDYPE----------------------------------------------- 367 (420)
T ss_pred -EEEeCCCCcEEEeecCCceEEEEcccCccchh-----------------------------------------------
Confidence 56778999888888888899998776433110
Q ss_pred hcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1516 ATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1516 ~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
.-+-|...|+++ .|+++|++++||+ |..++|+
T Consensus 368 ---~e~~h~~~Is~i-s~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 368 ---LEDIHSTTISSI-SYSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred ---HHHhhcCceeeE-EecCCCcEEeeec-ceeeeee
Confidence 001299999999 7999999999998 5566654
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=232.07 Aligned_cols=266 Identities=13% Similarity=0.123 Sum_probs=188.4
Q ss_pred cccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccc-------cccceeeecCCCceEEEEEec-CCcEEEEEeCCC
Q 000410 1138 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDIS-------FRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDG 1209 (1553)
Q Consensus 1138 H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~-------~~~~~~~~~h~~~I~~l~f~~-~~~~las~s~DG 1209 (1553)
|-..|+....++|+..+++|+.+..+..|+...+..... ......+.+|.+.|++++|+| +++.|++|+.||
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 344566666777877788888888888888654321100 011224678999999999999 789999999999
Q ss_pred cEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
+|++||+..... . ............|...|.+++|+|++ +++|++++.|+.|++||+++++....+.. |
T Consensus 99 tIkIWdi~~~~~-----~--~~~~~~l~~L~gH~~~V~~l~f~P~~--~~iLaSgs~DgtVrIWDl~tg~~~~~l~~--h 167 (493)
T PTZ00421 99 TIMGWGIPEEGL-----T--QNISDPIVHLQGHTKKVGIVSFHPSA--MNVLASAGADMVVNVWDVERGKAVEVIKC--H 167 (493)
T ss_pred EEEEEecCCCcc-----c--cccCcceEEecCCCCcEEEEEeCcCC--CCEEEEEeCCCEEEEEECCCCeEEEEEcC--C
Confidence 999999963110 0 00001112233567789999999974 35999999999999999999988877765 8
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEE----cCC
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA----GCN 1365 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s----~dg 1365 (1553)
.+.|++++|+|+|..|++|+.||.|++||+|.+..+..+..+....+.++.| .+. +..+++++ .|+
T Consensus 168 ~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w-~~~---------~~~ivt~G~s~s~Dr 237 (493)
T PTZ00421 168 SDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLW-AKR---------KDLIITLGCSKSQQR 237 (493)
T ss_pred CCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEE-cCC---------CCeEEEEecCCCCCC
Confidence 8899999999999999999999999999999998887776533333344555 443 23455543 378
Q ss_pred eEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-
Q 000410 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG- 1444 (1553)
Q Consensus 1366 ~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g- 1444 (1553)
.|++||+++......... . .....+....|++++
T Consensus 238 ~VklWDlr~~~~p~~~~~--~-------------------------------------------d~~~~~~~~~~d~d~~ 272 (493)
T PTZ00421 238 QIMLWDTRKMASPYSTVD--L-------------------------------------------DQSSALFIPFFDEDTN 272 (493)
T ss_pred eEEEEeCCCCCCceeEec--c-------------------------------------------CCCCceEEEEEcCCCC
Confidence 999999986542111110 0 001135556778887
Q ss_pred eEEEcc-CCCeEEEEeCCCCCCceEE
Q 000410 1445 DLLTGG-TDLKIRRWDHCSPGRSYCI 1469 (1553)
Q Consensus 1445 ~llTgg-~Dg~IrlWDl~~~~~s~~~ 1469 (1553)
.+++|| .|+.||+||+.+++..+..
T Consensus 273 ~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 273 LLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred EEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 455666 6999999999987655443
|
|
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-21 Score=227.44 Aligned_cols=264 Identities=15% Similarity=0.270 Sum_probs=208.4
Q ss_pred ccccCee---EEEEc-CCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1137 EHCSAVN---EIAIS-HDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1137 ~H~~~V~---~l~~s-pd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
.|...|+ .+..+ |.+++|.|||.||++++|+.........-......+.|...|.++..+.+++.|++||.|-+|+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK 98 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK 98 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence 4666677 55555 4667899999999999999875432111223456778999999999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEe-cCCCCcceEEEEEeCCceEEEEeCCCCc--ccceecc---
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNY-NTDNCASHMFMYSTQNCGIHLWDTRSNS--NTWTLKA--- 1286 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~s~~~l~~~s~dg~I~iwDlrt~~--~~~~l~~--- 1286 (1553)
+|+..... .-+......|...|.|+++ -.+ ...+++|+-|+.|.+||+.++. .+.++.+
T Consensus 99 ~W~~~~~~------------~~c~stir~H~DYVkcla~~ak~---~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~ 163 (735)
T KOG0308|consen 99 VWNAHKDN------------TFCMSTIRTHKDYVKCLAYIAKN---NELVASGGLDRKIFLWDINTGTATLVASFNNVTV 163 (735)
T ss_pred EeecccCc------------chhHhhhhcccchheeeeecccC---ceeEEecCCCccEEEEEccCcchhhhhhcccccc
Confidence 99987311 0111222357788899988 444 6699999999999999999883 3332221
Q ss_pred ---C-CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEE
Q 000410 1287 ---I-PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1362 (1553)
Q Consensus 1287 ---~-~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s 1362 (1553)
. ++...|.|++.++.|..+++|+..+.|++||-|+...+..++ +|..-|..+.. +.+|..++++|
T Consensus 164 ~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr~ll~----------~dDGt~~ls~s 232 (735)
T KOG0308|consen 164 NSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVRVLLV----------NDDGTRLLSAS 232 (735)
T ss_pred ccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee-ccccceEEEEE----------cCCCCeEeecC
Confidence 1 467789999999999999999999999999999999998888 46667777766 34567899999
Q ss_pred cCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC
Q 000410 1363 GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP 1442 (1553)
Q Consensus 1363 ~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp 1442 (1553)
.||+|++||+...+|+.++..+.. +|+++..+|
T Consensus 233 SDgtIrlWdLgqQrCl~T~~vH~e-----------------------------------------------~VWaL~~~~ 265 (735)
T KOG0308|consen 233 SDGTIRLWDLGQQRCLATYIVHKE-----------------------------------------------GVWALQSSP 265 (735)
T ss_pred CCceEEeeeccccceeeeEEeccC-----------------------------------------------ceEEEeeCC
Confidence 999999999999999999875543 688888887
Q ss_pred CC-eEEEccCCCeEEEEeCCCCCCceEEeCCC
Q 000410 1443 GG-DLLTGGTDLKIRRWDHCSPGRSYCICGPN 1473 (1553)
Q Consensus 1443 ~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~ 1473 (1553)
+- .+++||.||.|..=|+.++..+..++...
T Consensus 266 sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~d 297 (735)
T KOG0308|consen 266 SFTHVYSGGRDGNIYRTDLRNPAKSTLICKED 297 (735)
T ss_pred CcceEEecCCCCcEEecccCCchhheEeecCC
Confidence 76 68899999999999999987777666543
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.9e-21 Score=203.93 Aligned_cols=251 Identities=14% Similarity=0.184 Sum_probs=181.6
Q ss_pred ccCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEee
Q 000410 1139 CSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVD 1217 (1553)
Q Consensus 1139 ~~~V~~l~~sp-d~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~ 1217 (1553)
.+.|.+|+||| ...+++.||.||+||+|+++..... .+ .....|.++|.|++|+.+|..+++|+.|+.+++||+.
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~---~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL---VP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCcc---cc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 46799999999 4557779999999999999863211 12 2345688899999999999999999999999999997
Q ss_pred ecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEE
Q 000410 1218 HISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLV 1297 (1553)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~ 1297 (1553)
+.+ ... ...|..+|..++|-+... ...|++|++|.+|+.||.|....+.+++.+ +.+.++
T Consensus 103 S~Q--------------~~~-v~~Hd~pvkt~~wv~~~~-~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP---eRvYa~- 162 (347)
T KOG0647|consen 103 SGQ--------------VSQ-VAAHDAPVKTCHWVPGMN-YQCLVTGSWDKTLKFWDTRSSNPVATLQLP---ERVYAA- 162 (347)
T ss_pred CCC--------------eee-eeecccceeEEEEecCCC-cceeEecccccceeecccCCCCeeeeeecc---ceeeeh-
Confidence 421 111 224677788888877632 358999999999999999999999888763 334444
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCc-ccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC-
Q 000410 1298 TGPCGNWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG- 1375 (1553)
Q Consensus 1298 ~sp~g~~LvsGs~dG~l~lWDlr~~~-~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg- 1375 (1553)
+-....+++++.+..|.+++|+... ..+..+.+-...+.++.+| .+.. ..+.|+-.|.+.|..+..+
T Consensus 163 -Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f-~d~~---------~~alGsiEGrv~iq~id~~~ 231 (347)
T KOG0647|consen 163 -DVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACF-QDKD---------GFALGSIEGRVAIQYIDDPN 231 (347)
T ss_pred -hccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEE-ecCC---------ceEeeeecceEEEEecCCCC
Confidence 3345689999999999999997543 3333333444456677663 3322 3488999999999988765
Q ss_pred -cEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCC-CeEEEccCCC
Q 000410 1376 -SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG-GDLLTGGTDL 1453 (1553)
Q Consensus 1376 -~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~-g~llTgg~Dg 1453 (1553)
.--.+|+.+..... ..+....|++++|+|. |.|+|+|+||
T Consensus 232 ~~~nFtFkCHR~~~~--------------------------------------~~~~VYaVNsi~FhP~hgtlvTaGsDG 273 (347)
T KOG0647|consen 232 PKDNFTFKCHRSTNS--------------------------------------VNDDVYAVNSIAFHPVHGTLVTAGSDG 273 (347)
T ss_pred ccCceeEEEeccCCC--------------------------------------CCCceEEecceEeecccceEEEecCCc
Confidence 32334443332100 0112347899999995 6999999999
Q ss_pred eEEEEeCCC
Q 000410 1454 KIRRWDHCS 1462 (1553)
Q Consensus 1454 ~IrlWDl~~ 1462 (1553)
++.|||-..
T Consensus 274 tf~FWDkda 282 (347)
T KOG0647|consen 274 TFSFWDKDA 282 (347)
T ss_pred eEEEecchh
Confidence 999999653
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-21 Score=217.31 Aligned_cols=230 Identities=20% Similarity=0.237 Sum_probs=169.4
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc-ccccccceeeecCCCceEEEEEecCCcEEEEEeC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEK-DISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~-~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~ 1207 (1553)
+..-..|.+|+..|.++++.|.|..|+|||.|-+|+.||...+.. ...++...- +.+..|.++.|++.|+.|++.+.
T Consensus 157 ~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P--~E~h~i~sl~ys~Tg~~iLvvsg 234 (641)
T KOG0772|consen 157 GSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQP--CETHQINSLQYSVTGDQILVVSG 234 (641)
T ss_pred ccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCc--ccccccceeeecCCCCeEEEEec
Confidence 345667899999999999999999999999999999999997762 223333222 23446999999999999999998
Q ss_pred CCcEEEEEeeecccCCCccccccccccceec--ccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc-cccee
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKK--DTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS-NTWTL 1284 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~-~~~~l 1284 (1553)
...++|+|-+-.. ...-..+-..++.. ..+|-+.+++.+|+|.. .+.+++++.||++++||+...+ ....+
T Consensus 235 ~aqakl~DRdG~~----~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~--k~~FlT~s~DgtlRiWdv~~~k~q~qVi 308 (641)
T KOG0772|consen 235 SAQAKLLDRDGFE----IVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN--KEEFLTCSYDGTLRIWDVNNTKSQLQVI 308 (641)
T ss_pred CcceeEEccCCce----eeeeeccchhhhhhhccCCceeeeeccccccCc--ccceEEecCCCcEEEEecCCchhheeEE
Confidence 8899999876210 00111111222322 23567788999999995 5699999999999999997643 22222
Q ss_pred c---cCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--ccceeeccccC--CcceEEeecCCCCCccccCCCCE
Q 000410 1285 K---AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV--PVNSWQYSQVC--PIEKMCLFVPPPNAAVSTTARPL 1357 (1553)
Q Consensus 1285 ~---~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~--~l~s~~~~~~~--~I~~l~~~~p~~~~~~~s~~~~~ 1357 (1553)
+ ..+..-.+++++|+|+|.|+++|..||.|.+||.+... +.......|.. .|+++.| +.+|++
T Consensus 309 k~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F----------S~dg~~ 378 (641)
T KOG0772|consen 309 KTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF----------SYDGNY 378 (641)
T ss_pred eeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe----------ccccch
Confidence 2 22344579999999999999999999999999986442 33333333433 5666666 556779
Q ss_pred EEEEEcCCeEEEEEcCCCc
Q 000410 1358 IYVAAGCNEVSLWNAENGS 1376 (1553)
Q Consensus 1358 l~s~s~dg~V~vWDl~tg~ 1376 (1553)
|++-+.|+.+++||++..+
T Consensus 379 LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 379 LLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred hhhccCCCceeeeeccccc
Confidence 9999999999999998653
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-20 Score=232.80 Aligned_cols=226 Identities=12% Similarity=0.164 Sum_probs=166.3
Q ss_pred Cccc-CccEeeeccccccCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcccc-c-cccceeeecCCCceEEEEEecCC
Q 000410 1124 GWRP-RGILVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDI-S-FRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1124 ~W~p-~G~lv~~l~~H~~~V~~l~~spd-~~~laSgS~DGtVkIWD~~~~~~~~-~-~~~~~~~~~h~~~I~~l~f~~~~ 1199 (1553)
.|+. +...+..+.+|.++|++++|+|+ +.+|||||.||+|+|||+.+..... . ......+.+|...|.+++|+|++
T Consensus 58 L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g 137 (568)
T PTZ00420 58 LENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMN 137 (568)
T ss_pred eeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCC
Confidence 4652 34578899999999999999997 7899999999999999997542111 0 11334677899999999999988
Q ss_pred cE-EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC
Q 000410 1200 AQ-VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1278 (1553)
Q Consensus 1200 ~~-las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~ 1278 (1553)
.. +++|+.||+|+|||+.... ..... .+...+.+++|+++ |.+|++++.|+.|++||+|++
T Consensus 138 ~~iLaSgS~DgtIrIWDl~tg~-------------~~~~i--~~~~~V~Slswspd---G~lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 138 YYIMCSSGFDSFVNIWDIENEK-------------RAFQI--NMPKKLSSLKWNIK---GNLLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred CeEEEEEeCCCeEEEEECCCCc-------------EEEEE--ecCCcEEEEEECCC---CCEEEEEecCCEEEEEECCCC
Confidence 65 5789999999999997311 11111 23456889999998 779999999999999999999
Q ss_pred cccceeccCCCCcceEEE-----EEcCCCCEEEEEeCCC----cEEEEeCCC-CcccceeeccccCCcceEEeecCCCCC
Q 000410 1279 SNTWTLKAIPEEGYVSSL-----VTGPCGNWFVSGSSRG----VLTLWDLRF-LVPVNSWQYSQVCPIEKMCLFVPPPNA 1348 (1553)
Q Consensus 1279 ~~~~~l~~~~h~g~Itsl-----~~sp~g~~LvsGs~dG----~l~lWDlr~-~~~l~s~~~~~~~~I~~l~~~~p~~~~ 1348 (1553)
+.+.++.. |.+.+.+. .|++++.++++++.++ .|+|||+|. ..++..+.......+-...+ .+
T Consensus 200 ~~i~tl~g--H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~-D~---- 272 (568)
T PTZ00420 200 EIASSFHI--HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHY-DE---- 272 (568)
T ss_pred cEEEEEec--ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEee-eC----
Confidence 98888765 76654433 3458888988877664 799999995 55665554422211111112 11
Q ss_pred ccccCCCCEEEEEEcCCeEEEEEcCCCcEE
Q 000410 1349 AVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378 (1553)
Q Consensus 1349 ~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~ 1378 (1553)
..+.++++|++|+.|++|++..+.+.
T Consensus 273 ----~tg~l~lsGkGD~tIr~~e~~~~~~~ 298 (568)
T PTZ00420 273 ----STGLIYLIGKGDGNCRYYQHSLGSIR 298 (568)
T ss_pred ----CCCCEEEEEECCCeEEEEEccCCcEE
Confidence 23568889999999999999877543
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=231.85 Aligned_cols=220 Identities=12% Similarity=0.175 Sum_probs=164.7
Q ss_pred eccccccCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCccc-cccccceeeecCCCceEEEEEecCC-cEEEEEeCCCc
Q 000410 1134 HLQEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKD-ISFRSRLTYHLEGSRALCTMMLRHS-AQVVVGACDGI 1210 (1553)
Q Consensus 1134 ~l~~H~~~V~~l~~sp-d~~~laSgS~DGtVkIWD~~~~~~~-~~~~~~~~~~~h~~~I~~l~f~~~~-~~las~s~DG~ 1210 (1553)
.+.+|.+.|++++|+| ++.+|+|||.||+|+|||+.+.... ........+.+|...|.+++|+|.+ +.|++|+.||+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 4679999999999999 8889999999999999999764311 1112445678899999999999975 78999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
|+|||+.+.. .......|...|.+++|+|+ +.+|++++.|+.|++||+|+++.+.++.. |.
T Consensus 150 VrIWDl~tg~--------------~~~~l~~h~~~V~sla~spd---G~lLatgs~Dg~IrIwD~rsg~~v~tl~~--H~ 210 (493)
T PTZ00421 150 VNVWDVERGK--------------AVEVIKCHSDQITSLEWNLD---GSLLCTTSKDKKLNIIDPRDGTIVSSVEA--HA 210 (493)
T ss_pred EEEEECCCCe--------------EEEEEcCCCCceEEEEEECC---CCEEEEecCCCEEEEEECCCCcEEEEEec--CC
Confidence 9999997311 11122345667899999998 77999999999999999999998887765 55
Q ss_pred cc-eEEEEEcCCCCEEEEEe----CCCcEEEEeCCCCc-ccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEE-c
Q 000410 1291 GY-VSSLVTGPCGNWFVSGS----SRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-G 1363 (1553)
Q Consensus 1291 g~-Itsl~~sp~g~~LvsGs----~dG~l~lWDlr~~~-~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s-~ 1363 (1553)
+. +..+.|.+++..+++++ .||.|++||+|... ++....... .....+.++++ ++.++++++ +
T Consensus 211 ~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~-~~~~~~~~~d~---------d~~~L~lggkg 280 (493)
T PTZ00421 211 SAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQ-SSALFIPFFDE---------DTNLLYIGSKG 280 (493)
T ss_pred CCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCC-CCceEEEEEcC---------CCCEEEEEEeC
Confidence 44 45677888877776543 47999999999754 333332222 22222223233 455777776 6
Q ss_pred CCeEEEEEcCCCcEEEEEe
Q 000410 1364 CNEVSLWNAENGSCHQVLR 1382 (1553)
Q Consensus 1364 dg~V~vWDl~tg~~~~~l~ 1382 (1553)
|+.|++||+.+++......
T Consensus 281 Dg~Iriwdl~~~~~~~~~~ 299 (493)
T PTZ00421 281 EGNIRCFELMNERLTFCSS 299 (493)
T ss_pred CCeEEEEEeeCCceEEEee
Confidence 9999999999988766544
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-21 Score=233.99 Aligned_cols=257 Identities=15% Similarity=0.221 Sum_probs=198.1
Q ss_pred eeecc-ccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC----------------------------Ccc----cc---
Q 000410 1132 VAHLQ-EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRK----------------------------LEK----DI--- 1175 (1553)
Q Consensus 1132 v~~l~-~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~----------------------------~~~----~~--- 1175 (1553)
...+. +|+++|.++.||+||+|||||+.||.|+||.+.. .+. ..
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 45566 8999999999999999999999999999998765 000 00
Q ss_pred -------------------ccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccce
Q 000410 1176 -------------------SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIK 1236 (1553)
Q Consensus 1176 -------------------~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~ 1236 (1553)
.-++.+.|.+|.+.|.++.|+.+ +.|+++|.|.||++|++... .++.
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~-------------~CL~ 404 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRK-------------ECLK 404 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCc-------------ceee
Confidence 01345567899999999999865 57889999999999999631 1222
Q ss_pred ecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEE
Q 000410 1237 KKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTL 1316 (1553)
Q Consensus 1237 ~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~l 1316 (1553)
. ..|...|+|++|+|.+ .+++++|+-||.|++|++...+.+.-... +..||++||.|+|+..++||.+|.+++
T Consensus 405 ~--F~HndfVTcVaFnPvD--DryFiSGSLD~KvRiWsI~d~~Vv~W~Dl---~~lITAvcy~PdGk~avIGt~~G~C~f 477 (712)
T KOG0283|consen 405 V--FSHNDFVTCVAFNPVD--DRYFISGSLDGKVRLWSISDKKVVDWNDL---RDLITAVCYSPDGKGAVIGTFNGYCRF 477 (712)
T ss_pred E--EecCCeeEEEEecccC--CCcEeecccccceEEeecCcCeeEeehhh---hhhheeEEeccCCceEEEEEeccEEEE
Confidence 2 2577899999999985 56999999999999999998777644443 478999999999999999999999999
Q ss_pred EeCCCCcccceeeccc-------cCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCC
Q 000410 1317 WDLRFLVPVNSWQYSQ-------VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGD 1389 (1553)
Q Consensus 1317 WDlr~~~~l~s~~~~~-------~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~ 1389 (1553)
|+.+..+....++... ...|+.+.+ .|... ..|++.+.|..|+|+|.++-+.+..|.+.....
T Consensus 478 Y~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~-~p~~~--------~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~- 547 (712)
T KOG0283|consen 478 YDTEGLKLVSDFHIRLHNKKKKQGKRITGLQF-FPGDP--------DEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTS- 547 (712)
T ss_pred EEccCCeEEEeeeEeeccCccccCceeeeeEe-cCCCC--------CeEEEecCCCceEEEeccchhhhhhhcccccCC-
Confidence 9999887777766432 226888888 44332 268899999999999997766666665322100
Q ss_pred CccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCC
Q 000410 1390 TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1390 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~ 1463 (1553)
.=....|+.+| .|++|+.|..|++|+....
T Consensus 548 --------------------------------------------SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 548 --------------------------------------------SQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred --------------------------------------------cceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 11233455677 7889999999999998543
|
|
| >KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-20 Score=201.24 Aligned_cols=253 Identities=17% Similarity=0.238 Sum_probs=186.2
Q ss_pred ccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeee
Q 000410 1139 CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDH 1218 (1553)
Q Consensus 1139 ~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~ 1218 (1553)
.+.|.++.|+|.+..|+.+|.||+++++|+...+ .++.+ .|++++++++|.+ ...+++|+-||.|+.+|+.+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~------l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANS------LKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchh------hhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecC
Confidence 4789999999999999999999999999998753 22233 3677899999986 56788999999999999984
Q ss_pred cccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEE
Q 000410 1219 ISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1298 (1553)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~ 1298 (1553)
.. ......|...+.|+++.+. ...+++|++|++|++||.|......++.. ...|.|+..
T Consensus 85 ~~---------------~~~igth~~~i~ci~~~~~---~~~vIsgsWD~~ik~wD~R~~~~~~~~d~---~kkVy~~~v 143 (323)
T KOG1036|consen 85 GN---------------EDQIGTHDEGIRCIEYSYE---VGCVISGSWDKTIKFWDPRNKVVVGTFDQ---GKKVYCMDV 143 (323)
T ss_pred Cc---------------ceeeccCCCceEEEEeecc---CCeEEEcccCccEEEEecccccccccccc---CceEEEEec
Confidence 11 0112346778999999977 45899999999999999998766666654 336776665
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCccccee-eccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC--
Q 000410 1299 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSW-QYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG-- 1375 (1553)
Q Consensus 1299 sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~-~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg-- 1375 (1553)
.|+.|++|+.+..+.+||+|........ ...-.-.+.++++ .|.. .-.++++-+|.|.+=.+...
T Consensus 144 --~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~-~pn~---------eGy~~sSieGRVavE~~d~s~~ 211 (323)
T KOG1036|consen 144 --SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVAL-VPNG---------EGYVVSSIEGRVAVEYFDDSEE 211 (323)
T ss_pred --cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEE-ecCC---------CceEEEeecceEEEEccCCchH
Confidence 5789999999999999999975443211 1112235677777 4533 23678888999888666655
Q ss_pred --cEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCC-CeEEEccCC
Q 000410 1376 --SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG-GDLLTGGTD 1452 (1553)
Q Consensus 1376 --~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~-g~llTgg~D 1452 (1553)
....+|+.|..... ......+|++|+|+|- ++++|||+|
T Consensus 212 ~~skkyaFkCHr~~~~--------------------------------------~~~~~yPVNai~Fhp~~~tfaTgGsD 253 (323)
T KOG1036|consen 212 AQSKKYAFKCHRLSEK--------------------------------------DTEIIYPVNAIAFHPIHGTFATGGSD 253 (323)
T ss_pred HhhhceeEEeeecccC--------------------------------------CceEEEEeceeEeccccceEEecCCC
Confidence 44556665443111 0112247999999994 689999999
Q ss_pred CeEEEEeCCCCCCceEEe
Q 000410 1453 LKIRRWDHCSPGRSYCIC 1470 (1553)
Q Consensus 1453 g~IrlWDl~~~~~s~~~~ 1470 (1553)
|.|-+||+.+.++...+.
T Consensus 254 G~V~~Wd~~~rKrl~q~~ 271 (323)
T KOG1036|consen 254 GIVNIWDLFNRKRLKQLA 271 (323)
T ss_pred ceEEEccCcchhhhhhcc
Confidence 999999998877665443
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=216.73 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=203.7
Q ss_pred CCcccCc---cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC
Q 000410 1123 SGWRPRG---ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1123 ~~W~p~G---~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~ 1199 (1553)
..|+..| .++.+|.|-.++|+++.|.++++.++++|.|+.+++|++.... .+.++.+|...|+++.|.-..
T Consensus 200 k~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r------~~~TLsGHtdkVt~ak~~~~~ 273 (459)
T KOG0288|consen 200 KLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLR------LRHTLSGHTDKVTAAKFKLSH 273 (459)
T ss_pred hhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchh------hhhhhcccccceeeehhhccc
Confidence 4688443 3789999999999999999999999999999999999998764 666888999999999998877
Q ss_pred cEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1279 (1553)
Q Consensus 1200 ~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~ 1279 (1553)
..+++|+.|.+|+.||+.. .. +.+.... +..+..+..++ ..+++|-.|+.|++||+|++.
T Consensus 274 ~~vVsgs~DRtiK~WDl~k-~~------------C~kt~l~--~S~cnDI~~~~-----~~~~SgH~DkkvRfwD~Rs~~ 333 (459)
T KOG0288|consen 274 SRVVSGSADRTIKLWDLQK-AY------------CSKTVLP--GSQCNDIVCSI-----SDVISGHFDKKVRFWDIRSAD 333 (459)
T ss_pred cceeeccccchhhhhhhhh-hh------------eeccccc--cccccceEecc-----eeeeecccccceEEEeccCCc
Confidence 7799999999999999973 11 1111111 12223333332 278888999999999999999
Q ss_pred ccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1280 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1280 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
+....+. .|.|+|+..+++|..|++++.|.++.+.|+|+......+....- +. ..+...+.|++++.+++
T Consensus 334 ~~~sv~~---gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~----k~---asDwtrvvfSpd~~Yva 403 (459)
T KOG0288|consen 334 KTRSVPL---GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGF----KC---ASDWTRVVFSPDGSYVA 403 (459)
T ss_pred eeeEeec---CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccc----cc---ccccceeEECCCCceee
Confidence 9988876 57999999999999999999999999999998776655544211 10 22344556677788999
Q ss_pred EEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1360 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
+||.||.|+||++.+|+|..++..... .++|+++.
T Consensus 404 AGS~dgsv~iW~v~tgKlE~~l~~s~s---------------------------------------------~~aI~s~~ 438 (459)
T KOG0288|consen 404 AGSADGSVYIWSVFTGKLEKVLSLSTS---------------------------------------------NAAITSLS 438 (459)
T ss_pred eccCCCcEEEEEccCceEEEEeccCCC---------------------------------------------CcceEEEE
Confidence 999999999999999999888763322 12699999
Q ss_pred cCCCC-eEEEccCCCeEEEE
Q 000410 1440 PLPGG-DLLTGGTDLKIRRW 1458 (1553)
Q Consensus 1440 ~sp~g-~llTgg~Dg~IrlW 1458 (1553)
|+|.| .+++++.++.+++|
T Consensus 439 W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 439 WNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EcCCCchhhcccCCcceEec
Confidence 99988 68899999999999
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.8e-20 Score=227.41 Aligned_cols=241 Identities=15% Similarity=0.140 Sum_probs=170.6
Q ss_pred EEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC-CcEEEEEeCCCcEEEEEeeecccCCCcccccccccc
Q 000410 1156 SASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISD 1234 (1553)
Q Consensus 1156 SgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~-~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~ 1234 (1553)
+|+.+|.|++|+..+.. ....+.+|.+.|.+++|+|+ ++.||+|+.||+|+|||+...... .... ..
T Consensus 49 gGG~~gvI~L~~~~r~~------~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~---~~~i---~~ 116 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKP------PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDES---VKEI---KD 116 (568)
T ss_pred CCCceeEEEeeecCCCc------eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcc---cccc---cc
Confidence 37789999999987542 44567889999999999996 789999999999999999631100 0000 01
Q ss_pred ceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcE
Q 000410 1235 IKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVL 1314 (1553)
Q Consensus 1235 ~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l 1314 (1553)
.......|...|.+++|+|++ ..++++++.|++|++||+++++....+. +.+.|++++|+|+|.+|++|+.||.|
T Consensus 117 p~~~L~gH~~~V~sVaf~P~g--~~iLaSgS~DgtIrIWDl~tg~~~~~i~---~~~~V~SlswspdG~lLat~s~D~~I 191 (568)
T PTZ00420 117 PQCILKGHKKKISIIDWNPMN--YYIMCSSGFDSFVNIWDIENEKRAFQIN---MPKKLSSLKWNIKGNLLSGTCVGKHM 191 (568)
T ss_pred ceEEeecCCCcEEEEEECCCC--CeEEEEEeCCCeEEEEECCCCcEEEEEe---cCCcEEEEEECCCCCEEEEEecCCEE
Confidence 111223567789999999984 3367899999999999999998777664 45689999999999999999999999
Q ss_pred EEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCC----eEEEEEcCC-CcEEEEEecccCCCC
Q 000410 1315 TLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN----EVSLWNAEN-GSCHQVLRTANYDGD 1389 (1553)
Q Consensus 1315 ~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg----~V~vWDl~t-g~~~~~l~~~~~~~~ 1389 (1553)
++||+|.+..+..+.. |.+.+....++. ..+++++.++++++.++ +|+|||+++ ++++..+.....
T Consensus 192 rIwD~Rsg~~i~tl~g-H~g~~~s~~v~~-----~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~--- 262 (568)
T PTZ00420 192 HIIDPRKQEIASSFHI-HDGGKNTKNIWI-----DGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA--- 262 (568)
T ss_pred EEEECCCCcEEEEEec-ccCCceeEEEEe-----eeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC---
Confidence 9999999988887765 444433322211 11234556788877663 799999985 444443321110
Q ss_pred CccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCC
Q 000410 1390 TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPG 1464 (1553)
Q Consensus 1390 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~ 1464 (1553)
...+......++| .+++|+.|+.||+|++..+.
T Consensus 263 ------------------------------------------~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 263 ------------------------------------------SAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred ------------------------------------------ccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc
Confidence 0012222223456 46699999999999997653
|
|
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.7e-21 Score=204.62 Aligned_cols=268 Identities=20% Similarity=0.322 Sum_probs=203.7
Q ss_pred CCCcc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeC------CC--------Cc--------------
Q 000410 1122 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDS------RK--------LE-------------- 1172 (1553)
Q Consensus 1122 ~~~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~------~~--------~~-------------- 1172 (1553)
...|. ..|.|+.++.||.+.|++|+|++.+.+++|||.|++..||.. .+ .+
T Consensus 172 A~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d 251 (481)
T KOG0300|consen 172 ARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTD 251 (481)
T ss_pred eeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccc
Confidence 34798 559999999999999999999999999999999999999972 11 00
Q ss_pred ---cc--cccc-cceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEE
Q 000410 1173 ---KD--ISFR-SRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIV 1246 (1553)
Q Consensus 1173 ---~~--~~~~-~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 1246 (1553)
+. .+.+ +...+.+|.+.|.+..|..+|+.++++++|.+..+||+++. .+.....+|....
T Consensus 252 ~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg--------------e~v~~LtGHd~EL 317 (481)
T KOG0300|consen 252 SSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG--------------EVVNILTGHDSEL 317 (481)
T ss_pred cccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccC--------------ceeccccCcchhc
Confidence 00 0112 34567789999999999999999999999999999999851 2223334566666
Q ss_pred EEEEecCCCCcceEEEEEeCCceEEEEeCCCC-cccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cc
Q 000410 1247 TLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN-SNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VP 1324 (1553)
Q Consensus 1247 ~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~-~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~-~~ 1324 (1553)
+.++.+|. +.++++++.|.+.++||.|.. ..+..|++ |...|++..|..+ ..+++|+.|.+|++||+|.. .+
T Consensus 318 tHcstHpt---QrLVvTsSrDtTFRLWDFReaI~sV~VFQG--HtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRsp 391 (481)
T KOG0300|consen 318 THCSTHPT---QRLVVTSSRDTTFRLWDFREAIQSVAVFQG--HTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSP 391 (481)
T ss_pred cccccCCc---ceEEEEeccCceeEeccchhhcceeeeecc--cccceeEEEEecC-CceeecCCCceEEEeeeccccCc
Confidence 66678888 789999999999999999943 23445655 9999999999875 47899999999999999864 35
Q ss_pred cceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCC
Q 000410 1325 VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSS 1404 (1553)
Q Consensus 1325 l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~ 1404 (1553)
+.++.. .++++++.. +..++.++.--.+..|++||+. |..+..+...
T Consensus 392 lATIRt--dS~~NRvav----------s~g~~iIAiPhDNRqvRlfDln-G~RlaRlPrt-------------------- 438 (481)
T KOG0300|consen 392 LATIRT--DSPANRVAV----------SKGHPIIAIPHDNRQVRLFDLN-GNRLARLPRT-------------------- 438 (481)
T ss_pred ceeeec--CCccceeEe----------ecCCceEEeccCCceEEEEecC-CCccccCCcc--------------------
Confidence 555543 456777766 2234567777778899999997 4433222210
Q ss_pred CCCCCccccccccccccccccCCCCCCccCcEEeccCCCC---eEEEccCCCeEEEEeCCCCC
Q 000410 1405 RSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG---DLLTGGTDLKIRRWDHCSPG 1464 (1553)
Q Consensus 1405 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g---~llTgg~Dg~IrlWDl~~~~ 1464 (1553)
...+|..-|.|++|..+. .|+|+|-|+.+.=|.+..+.
T Consensus 439 ----------------------sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 439 ----------------------SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred ----------------------cccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 113566679999997543 79999999999999987664
|
|
| >KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=200.97 Aligned_cols=309 Identities=17% Similarity=0.233 Sum_probs=209.5
Q ss_pred ccccCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCc--c--cccccc-----ceeeecCCCceEEEEEec-CCcEEEEE
Q 000410 1137 EHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLE--K--DISFRS-----RLTYHLEGSRALCTMMLR-HSAQVVVG 1205 (1553)
Q Consensus 1137 ~H~~~V~~l~~sp-d~~~laSgS~DGtVkIWD~~~~~--~--~~~~~~-----~~~~~~h~~~I~~l~f~~-~~~~las~ 1205 (1553)
-|.+.|+++.+.+ .|++++||+.||.+.|||++... . ....+. +..-.+|.-.|.++.|.| +...|.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 4889999999987 68999999999999999998644 1 111111 112235666899999999 56688899
Q ss_pred eCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceec
Q 000410 1206 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1206 s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
|.|.+++|||.++.+ ......-...|...+++|-..+.-++++|+.+..|++.|+.+|.+..+|.
T Consensus 121 SFDhtlKVWDtnTlQ---------------~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~Ls 185 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQ---------------EAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLS 185 (397)
T ss_pred cccceEEEeecccce---------------eeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeec
Confidence 999999999997521 11122234456666777765444588999999999999999999999998
Q ss_pred cCCCCcceEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcC
Q 000410 1286 AIPEEGYVSSLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGC 1364 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g~~-LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~d 1364 (1553)
+ |.+.|.++.|+|...| |++|+.||.+++||+|.- .
T Consensus 186 G--Hr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra-----------------------------------------s 222 (397)
T KOG4283|consen 186 G--HRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA-----------------------------------------S 222 (397)
T ss_pred c--ccCceEEEEeccCceeEEEecCCCceEEEEEeecc-----------------------------------------c
Confidence 7 9999999999999888 578999999999998721 1
Q ss_pred CeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC
Q 000410 1365 NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1444 (1553)
Q Consensus 1365 g~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g 1444 (1553)
|.+++.|..+++....+ +..+.|.+.|..++|..+|
T Consensus 223 gcf~~lD~hn~k~~p~~--------------------------------------------~~n~ah~gkvngla~tSd~ 258 (397)
T KOG4283|consen 223 GCFRVLDQHNTKRPPIL--------------------------------------------KTNTAHYGKVNGLAWTSDA 258 (397)
T ss_pred ceeEEeecccCccCccc--------------------------------------------cccccccceeeeeeecccc
Confidence 22334444433211111 1124566689999999988
Q ss_pred -eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCC
Q 000410 1445 -DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1523 (1553)
Q Consensus 1445 -~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1523 (1553)
.++++|.|.++|+|+..+++.+..-.|+-.....-.+-+..+....-.++--...... .--+..+......+..|
T Consensus 259 ~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~l----all~~~sgs~ir~l~~h 334 (397)
T KOG4283|consen 259 RYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSL----ALLNLLEGSFVRRLSTH 334 (397)
T ss_pred hhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeE----EEEEccCceEEEeeecc
Confidence 6889999999999999999887766665432111111111122111111111000000 00000111122355678
Q ss_pred ccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1524 RDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1524 ~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
...|++. ++.++.+-..++++||.|.-|
T Consensus 335 ~k~i~c~-~~~~~fq~~~tg~~d~ni~~w 362 (397)
T KOG4283|consen 335 LKRINCA-AYRPDFEQCFTGDMNGNIYMW 362 (397)
T ss_pred cceeeEE-eecCchhhhhccccCCccccc
Confidence 7788877 788888889999999999888
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.5e-20 Score=219.67 Aligned_cols=257 Identities=18% Similarity=0.249 Sum_probs=205.0
Q ss_pred Ccc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeec-CCCceEEEEEecCCcE
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~-h~~~I~~l~f~~~~~~ 1201 (1553)
+|+ ..|....-..-|...|+++.|+++|.+||.|-.+|+|.|||.....+ ..++.+ |..+|-|++|. +..
T Consensus 201 lW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~------~~~~~~~h~~rvg~laW~--~~~ 272 (484)
T KOG0305|consen 201 LWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKK------TRTLRGSHASRVGSLAWN--SSV 272 (484)
T ss_pred EEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccc------cccccCCcCceeEEEecc--Cce
Confidence 587 44664443344489999999999999999999999999999987653 234445 88999999997 778
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+.+|+.||.|..+|++.... ... ....|...|..+.|+++ +.++++|++|+.+.+||.......
T Consensus 273 lssGsr~~~I~~~dvR~~~~------------~~~-~~~~H~qeVCgLkws~d---~~~lASGgnDN~~~Iwd~~~~~p~ 336 (484)
T KOG0305|consen 273 LSSGSRDGKILNHDVRISQH------------VVS-TLQGHRQEVCGLKWSPD---GNQLASGGNDNVVFIWDGLSPEPK 336 (484)
T ss_pred EEEecCCCcEEEEEEecchh------------hhh-hhhcccceeeeeEECCC---CCeeccCCCccceEeccCCCcccc
Confidence 99999999999999984221 111 24467888999999999 789999999999999999888888
Q ss_pred ceeccCCCCcceEEEEEcCC-CCEEEEEe--CCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPC-GNWFVSGS--SRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~-g~~LvsGs--~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l 1358 (1553)
.++.. |.+.|..++|+|. ...|++|+ .|+.|++||..++..+..... ...|..+.| .+... -+
T Consensus 337 ~~~~~--H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt--gsQVcsL~W-sk~~k---------Ei 402 (484)
T KOG0305|consen 337 FTFTE--HTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT--GSQVCSLIW-SKKYK---------EL 402 (484)
T ss_pred EEEec--cceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc--CCceeeEEE-cCCCC---------EE
Confidence 77766 9999999999995 47888754 699999999999998887654 457888888 55442 45
Q ss_pred EEEEc--CCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcE
Q 000410 1359 YVAAG--CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1436 (1553)
Q Consensus 1359 ~s~s~--dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1436 (1553)
+++.| ++.|.||+..+.+....+. +|...|.
T Consensus 403 ~sthG~s~n~i~lw~~ps~~~~~~l~-----------------------------------------------gH~~RVl 435 (484)
T KOG0305|consen 403 LSTHGYSENQITLWKYPSMKLVAELL-----------------------------------------------GHTSRVL 435 (484)
T ss_pred EEecCCCCCcEEEEeccccceeeeec-----------------------------------------------CCcceeE
Confidence 65554 6789999999865544443 3444699
Q ss_pred EeccCCCC-eEEEccCCCeEEEEeCCCCCC
Q 000410 1437 SLLPLPGG-DLLTGGTDLKIRRWDHCSPGR 1465 (1553)
Q Consensus 1437 sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~ 1465 (1553)
.++++|+| .++||+.|.++|||++-....
T Consensus 436 ~la~SPdg~~i~t~a~DETlrfw~~f~~~~ 465 (484)
T KOG0305|consen 436 YLALSPDGETIVTGAADETLRFWNLFDERP 465 (484)
T ss_pred EEEECCCCCEEEEecccCcEEeccccCCCC
Confidence 99999998 788999999999999976533
|
|
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.6e-20 Score=206.82 Aligned_cols=211 Identities=17% Similarity=0.293 Sum_probs=176.8
Q ss_pred cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEe
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s 1206 (1553)
|.++++++|.||...|+.+.++|+...++++|.|..++||...... .......|.++|+.+..+|+|.+|++++
T Consensus 249 ~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s------~~~~~~~h~~~V~~ls~h~tgeYllsAs 322 (506)
T KOG0289|consen 249 PSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS------EPTSSRPHEEPVTGLSLHPTGEYLLSAS 322 (506)
T ss_pred chhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc------CccccccccccceeeeeccCCcEEEEec
Confidence 7788999999999999999999999999999999999999987543 3445667999999999999999999999
Q ss_pred CCCcEEEEEeeecccCCCccccccccccceeccc-CCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceec
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDT-KEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1207 ~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
.||+.-..|+.... .+..... ..+-.+.+.+|||| |.++.+|+.||.|++||+..+..+..|.
T Consensus 323 ~d~~w~Fsd~~~g~-------------~lt~vs~~~s~v~~ts~~fHpD---gLifgtgt~d~~vkiwdlks~~~~a~Fp 386 (506)
T KOG0289|consen 323 NDGTWAFSDISSGS-------------QLTVVSDETSDVEYTSAAFHPD---GLIFGTGTPDGVVKIWDLKSQTNVAKFP 386 (506)
T ss_pred CCceEEEEEccCCc-------------EEEEEeeccccceeEEeeEcCC---ceEEeccCCCceEEEEEcCCccccccCC
Confidence 99999988887311 1111211 23345778899999 8899999999999999999999888775
Q ss_pred cCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCC
Q 000410 1286 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg 1365 (1553)
+ |.++|++++|+.+|.||++++.||.|++||+|..+..+++......++..+++ .+. |.+++.++.+=
T Consensus 387 g--ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~f-D~S---------Gt~L~~~g~~l 454 (506)
T KOG0289|consen 387 G--HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSF-DQS---------GTYLGIAGSDL 454 (506)
T ss_pred C--CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEE-cCC---------CCeEEeeccee
Confidence 5 99999999999999999999999999999999999999998877778888888 443 55787775555
Q ss_pred eEEEEE
Q 000410 1366 EVSLWN 1371 (1553)
Q Consensus 1366 ~V~vWD 1371 (1553)
.|.+++
T Consensus 455 ~Vy~~~ 460 (506)
T KOG0289|consen 455 QVYICK 460 (506)
T ss_pred EEEEEe
Confidence 555555
|
|
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.6e-19 Score=180.26 Aligned_cols=310 Identities=18% Similarity=0.230 Sum_probs=223.1
Q ss_pred cccCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------ccccccc---ceeeecCCCceEEEEE
Q 000410 1125 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE------KDISFRS---RLTYHLEGSRALCTMM 1195 (1553)
Q Consensus 1125 W~p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~------~~~~~~~---~~~~~~h~~~I~~l~f 1195 (1553)
-+++-..|..|. ...+|.+++|+|.|.+.+.||+..|.+|-...... ......+ ...-+.|.+.|.|.+|
T Consensus 19 ~k~~f~~i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~w 97 (350)
T KOG0641|consen 19 EKKHFEAINILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAW 97 (350)
T ss_pred cccceEEEEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEe
Confidence 345555666664 67889999999999999999999999998543211 1111111 1123457789999999
Q ss_pred ecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCc-ceEEEEEe-CCceEEEE
Q 000410 1196 LRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA-SHMFMYST-QNCGIHLW 1273 (1553)
Q Consensus 1196 ~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s-~~~l~~~s-~dg~I~iw 1273 (1553)
+|.|..+++|+.|.+|++...+.... ...+ .-..++ -|...|..++|-.+..+ +.+|++++ .|..|++-
T Consensus 98 s~~geliatgsndk~ik~l~fn~dt~------~~~g--~dle~n-mhdgtirdl~fld~~~s~~~il~s~gagdc~iy~t 168 (350)
T KOG0641|consen 98 SPCGELIATGSNDKTIKVLPFNADTC------NATG--HDLEFN-MHDGTIRDLAFLDDPESGGAILASAGAGDCKIYIT 168 (350)
T ss_pred cCccCeEEecCCCceEEEEecccccc------cccC--cceeee-ecCCceeeeEEecCCCcCceEEEecCCCcceEEEe
Confidence 99999999999999999988763110 1111 111112 24556677777654333 34555544 47789999
Q ss_pred eCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccc-c-----CCcceEEeecCCCC
Q 000410 1274 DTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-V-----CPIEKMCLFVPPPN 1347 (1553)
Q Consensus 1274 Dlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~-~-----~~I~~l~~~~p~~~ 1347 (1553)
|..+|+....+.+ |.|-|.++ ++-+|-.+++|+.|.+|++||+|-..+++.+.... . +.|..++.
T Consensus 169 dc~~g~~~~a~sg--htghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v------ 239 (350)
T KOG0641|consen 169 DCGRGQGFHALSG--HTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV------ 239 (350)
T ss_pred ecCCCCcceeecC--CcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE------
Confidence 9999998888876 88888876 34567789999999999999999998888775431 1 23444544
Q ss_pred CccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCC
Q 000410 1348 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1427 (1553)
Q Consensus 1348 ~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 1427 (1553)
.+.|+++++|-.|....+||++.|..++.|..+.
T Consensus 240 ----dpsgrll~sg~~dssc~lydirg~r~iq~f~phs------------------------------------------ 273 (350)
T KOG0641|consen 240 ----DPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHS------------------------------------------ 273 (350)
T ss_pred ----CCCcceeeeccCCCceEEEEeeCCceeeeeCCCc------------------------------------------
Confidence 3457799999999999999999988877775322
Q ss_pred CCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhh
Q 000410 1428 PPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKL 1506 (1553)
Q Consensus 1428 ~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 1506 (1553)
..|+|+.|+|.. +++||+.|.+|++=|++.. ... .-...++.|
T Consensus 274 -----adir~vrfsp~a~yllt~syd~~ikltdlqgd-la~--------------------el~~~vv~e---------- 317 (350)
T KOG0641|consen 274 -----ADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD-LAH--------------------ELPIMVVAE---------- 317 (350)
T ss_pred -----cceeEEEeCCCceEEEEecccceEEEeecccc-hhh--------------------cCceEEEEe----------
Confidence 269999999988 7889999999999998631 000 012334444
Q ss_pred hHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1507 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1507 ~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
|.|.+..+ .|++..--++|.|.|.++-+|
T Consensus 318 ----------------hkdk~i~~-rwh~~d~sfisssadkt~tlw 346 (350)
T KOG0641|consen 318 ----------------HKDKAIQC-RWHPQDFSFISSSADKTATLW 346 (350)
T ss_pred ----------------ccCceEEE-EecCccceeeeccCcceEEEe
Confidence 88877777 688887778999999999999
|
|
| >KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-20 Score=212.35 Aligned_cols=285 Identities=16% Similarity=0.223 Sum_probs=216.4
Q ss_pred cccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEE
Q 000410 1136 QEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFS 1215 (1553)
Q Consensus 1136 ~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwd 1215 (1553)
-.|..-|.+++.|...+.+.||+. |.|||||+...+ +....+.+-.......|.++...|+|+.|++|+.-.++.|||
T Consensus 416 L~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg-~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWD 493 (705)
T KOG0639|consen 416 LAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPG-NKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWD 493 (705)
T ss_pred hccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCC-CCCccccccccCcccceeeeEecCCCceEEeccccceeeeee
Confidence 358899999999999999999986 899999998653 111112222222456789999999999999999999999999
Q ss_pred eeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEE
Q 000410 1216 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1295 (1553)
Q Consensus 1216 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1295 (1553)
+..... .+.............++.+|+ .++.+++..||.|.+||++....+..|++ |.+.+.|
T Consensus 494 LAapTp------------rikaeltssapaCyALa~spD---akvcFsccsdGnI~vwDLhnq~~VrqfqG--htDGasc 556 (705)
T KOG0639|consen 494 LAAPTP------------RIKAELTSSAPACYALAISPD---AKVCFSCCSDGNIAVWDLHNQTLVRQFQG--HTDGASC 556 (705)
T ss_pred ccCCCc------------chhhhcCCcchhhhhhhcCCc---cceeeeeccCCcEEEEEcccceeeecccC--CCCCcee
Confidence 974221 122222223345566788998 67999999999999999999999999987 9999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC
Q 000410 1296 LVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG 1375 (1553)
Q Consensus 1296 l~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg 1375 (1553)
+.++++|..|.+|+-|.+|++||+|.+..+....+ .+.|.++.+ +| .+.|+++|-.++.|.|......
T Consensus 557 Idis~dGtklWTGGlDntvRcWDlregrqlqqhdF--~SQIfSLg~-cP---------~~dWlavGMens~vevlh~skp 624 (705)
T KOG0639|consen 557 IDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF--SSQIFSLGY-CP---------TGDWLAVGMENSNVEVLHTSKP 624 (705)
T ss_pred EEecCCCceeecCCCccceeehhhhhhhhhhhhhh--hhhheeccc-CC---------CccceeeecccCcEEEEecCCc
Confidence 99999999999999999999999999887765443 335655555 44 4569999999999888776544
Q ss_pred cEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCe
Q 000410 1376 SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLK 1454 (1553)
Q Consensus 1376 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~ 1454 (1553)
+..+ + .-|...|.++.|.+.| ++++.|.|.-
T Consensus 625 ~kyq-l-----------------------------------------------hlheScVLSlKFa~cGkwfvStGkDnl 656 (705)
T KOG0639|consen 625 EKYQ-L-----------------------------------------------HLHESCVLSLKFAYCGKWFVSTGKDNL 656 (705)
T ss_pred ccee-e-----------------------------------------------cccccEEEEEEecccCceeeecCchhh
Confidence 3211 1 1233478999999988 7889999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeee
Q 000410 1455 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1534 (1553)
Q Consensus 1455 IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1534 (1553)
+-.|.+--+...+... -...|+++ .++
T Consensus 657 LnawrtPyGasiFqsk----------------------------------------------------E~SsVlsC-DIS 683 (705)
T KOG0639|consen 657 LNAWRTPYGASIFQSK----------------------------------------------------ESSSVLSC-DIS 683 (705)
T ss_pred hhhccCccccceeecc----------------------------------------------------ccCcceee-eec
Confidence 9999865443322111 24578888 689
Q ss_pred cCCcEEEEEcCCceEEEc
Q 000410 1535 LNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1535 ~~~~~LvSas~DG~IkVW 1552 (1553)
.+.++|||||-|...-||
T Consensus 684 ~ddkyIVTGSGdkkATVY 701 (705)
T KOG0639|consen 684 FDDKYIVTGSGDKKATVY 701 (705)
T ss_pred cCceEEEecCCCcceEEE
Confidence 999999999999776665
|
|
| >KOG0294 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=199.74 Aligned_cols=245 Identities=15% Similarity=0.197 Sum_probs=189.4
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc--EEEEEeC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA--QVVVGAC 1207 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~--~las~s~ 1207 (1553)
..+.+++.|.++|+++|++ +.|+||||.|-+|+|||..+.. .......|.+.|+++.|.++.. .|++|++
T Consensus 34 ~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~------qlg~ll~HagsitaL~F~~~~S~shLlS~sd 105 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK------QLGILLSHAGSITALKFYPPLSKSHLLSGSD 105 (362)
T ss_pred eccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchh------hhcceeccccceEEEEecCCcchhheeeecC
Confidence 3466788999999999995 8999999999999999998754 3345567889999999998764 8999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
||.|.+||+.. ..+......|...|+.++.+|. +++.++.+.|+.++.||+-.|+....+..
T Consensus 106 DG~i~iw~~~~--------------W~~~~slK~H~~~Vt~lsiHPS---~KLALsVg~D~~lr~WNLV~Gr~a~v~~L- 167 (362)
T KOG0294|consen 106 DGHIIIWRVGS--------------WELLKSLKAHKGQVTDLSIHPS---GKLALSVGGDQVLRTWNLVRGRVAFVLNL- 167 (362)
T ss_pred CCcEEEEEcCC--------------eEEeeeecccccccceeEecCC---CceEEEEcCCceeeeehhhcCccceeecc-
Confidence 99999999962 2333444556666999999998 78999999999999999999998877654
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
....+.+.|+|.|.+++.+..++ |-+|-+...........+ ..+.++.| .++..+++|+.|+.|
T Consensus 168 --~~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~~~--~r~l~~~~-----------l~~~~L~vG~d~~~i 231 (362)
T KOG0294|consen 168 --KNKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIENP--KRILCATF-----------LDGSELLVGGDNEWI 231 (362)
T ss_pred --CCcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhhcc--ccceeeee-----------cCCceEEEecCCceE
Confidence 23355699999999998888774 889998766555554442 23444443 135679999999999
Q ss_pred EEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC--CCC-
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL--PGG- 1444 (1553)
Q Consensus 1368 ~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s--p~g- 1444 (1553)
++||..++.|...+.. |...|.++.+- |.+
T Consensus 232 ~~~D~ds~~~~~~~~A-----------------------------------------------H~~RVK~i~~~~~~~~~ 264 (362)
T KOG0294|consen 232 SLKDTDSDTPLTEFLA-----------------------------------------------HENRVKDIASYTNPEHE 264 (362)
T ss_pred EEeccCCCccceeeec-----------------------------------------------chhheeeeEEEecCCce
Confidence 9999988766555543 22345566532 344
Q ss_pred eEEEccCCCeEEEEeCCCC
Q 000410 1445 DLLTGGTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1445 ~llTgg~Dg~IrlWDl~~~ 1463 (1553)
.|+|+|+||.|++||++..
T Consensus 265 ~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 265 YLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEEeccCceEEEEEcccc
Confidence 6779999999999999754
|
|
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=218.38 Aligned_cols=268 Identities=15% Similarity=0.179 Sum_probs=220.1
Q ss_pred CCCcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1122 DSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1122 ~~~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
-..|+-. ++++.++... .+.+..|-|.++++++|...|.+.|+|+....- .-+...|.+.|++++..|++.
T Consensus 396 ikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l------~Eti~AHdgaIWsi~~~pD~~ 467 (888)
T KOG0306|consen 396 IKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASASL------VETIRAHDGAIWSISLSPDNK 467 (888)
T ss_pred EEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehhhh------hhhhhccccceeeeeecCCCC
Confidence 3469844 8999999755 888999999999999999999999999987652 224457999999999999999
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++||.|.+|++||........+.-.+.-.....+.. .-...|.|+.++|+ +.+|+++--|++|++|=+.+.+-
T Consensus 468 g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL--el~ddvL~v~~Spd---gk~LaVsLLdnTVkVyflDtlKF 542 (888)
T KOG0306|consen 468 GFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL--ELEDDVLCVSVSPD---GKLLAVSLLDNTVKVYFLDTLKF 542 (888)
T ss_pred ceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEE--eccccEEEEEEcCC---CcEEEEEeccCeEEEEEecceee
Confidence 99999999999999987533211211121111111222 23457889999999 88999999999999999998876
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEE
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1360 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s 1360 (1553)
--++- +|.=+|.|+.++||++.+++||.|..|++|-+.|+.|-+++-. |+..|.++.| .|.. ..+++
T Consensus 543 flsLY--GHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fA-HdDSvm~V~F-~P~~---------~~FFt 609 (888)
T KOG0306|consen 543 FLSLY--GHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFA-HDDSVMSVQF-LPKT---------HLFFT 609 (888)
T ss_pred eeeec--ccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhc-ccCceeEEEE-cccc---------eeEEE
Confidence 65664 4999999999999999999999999999999999999999875 7778999988 6643 47899
Q ss_pred EEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEecc
Q 000410 1361 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1440 (1553)
Q Consensus 1361 ~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1440 (1553)
+|-|+.|+-||-++.++.+.+.++ ...|+|++.
T Consensus 610 ~gKD~kvKqWDg~kFe~iq~L~~H-----------------------------------------------~~ev~cLav 642 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKFEEIQKLDGH-----------------------------------------------HSEVWCLAV 642 (888)
T ss_pred ecCcceEEeechhhhhhheeeccc-----------------------------------------------hheeeeeEE
Confidence 999999999999999988887633 336999999
Q ss_pred CCCC-eEEEccCCCeEEEEeCCC
Q 000410 1441 LPGG-DLLTGGTDLKIRRWDHCS 1462 (1553)
Q Consensus 1441 sp~g-~llTgg~Dg~IrlWDl~~ 1462 (1553)
.|+| +++|+|.|..||+|...+
T Consensus 643 ~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 643 SPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred cCCCCeEEeccCCceeEeeeccC
Confidence 9998 788999999999999754
|
|
| >KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.6e-20 Score=215.24 Aligned_cols=242 Identities=17% Similarity=0.300 Sum_probs=187.3
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEE-EEEec-CCcEEEEEeC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC-TMMLR-HSAQVVVGAC 1207 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~-l~f~~-~~~~las~s~ 1207 (1553)
++-+.+.||+..|..+++. ++..+++||.||++|+|+-...+ +.....+.+|.+.|.+ ++|.+ ++-.+++|+.
T Consensus 5 ~ls~~l~gH~~DVr~v~~~-~~~~i~s~sRd~t~~vw~~~~~~----~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~ 79 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVT-DGVCIISGSRDGTVKVWAKKGKQ----YLETHAFEGPKGFIANSICYAESDKGRLVVGGM 79 (745)
T ss_pred eeEEEeccCccchheeEec-CCeEEeecCCCCceeeeeccCcc----cccceecccCcceeeccceeccccCcceEeecc
Confidence 5678899999999888876 45589999999999999976543 2233456667776766 88886 4446999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|++|.+|...... .+ -...+|..-|.+++...+ + .+++|++|.++++|-. +++...+++
T Consensus 80 D~~i~v~~~~~~~-------------P~-~~LkgH~snVC~ls~~~~---~-~~iSgSWD~TakvW~~--~~l~~~l~g- 138 (745)
T KOG0301|consen 80 DTTIIVFKLSQAE-------------PL-YTLKGHKSNVCSLSIGED---G-TLISGSWDSTAKVWRI--GELVYSLQG- 138 (745)
T ss_pred cceEEEEecCCCC-------------ch-hhhhccccceeeeecCCc---C-ceEecccccceEEecc--hhhhcccCC-
Confidence 9999999886211 11 123356677777765554 2 5999999999999965 456666655
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
|...|++++.-|++ .+++|+.|.+|++|.- ++.++++.. |..-|..+++ -+.. .+++++.||.|
T Consensus 139 -H~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~g-HtD~VRgL~v-l~~~----------~flScsNDg~I 202 (745)
T KOG0301|consen 139 -HTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSG-HTDCVRGLAV-LDDS----------HFLSCSNDGSI 202 (745)
T ss_pred -cchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhhcc-chhheeeeEE-ecCC----------CeEeecCCceE
Confidence 99999999999987 8999999999999985 677788876 6667888877 4432 48999999999
Q ss_pred EEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec-cCCCCeE
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL-PLPGGDL 1446 (1553)
Q Consensus 1368 ~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~-~sp~g~l 1446 (1553)
++|++ +|+|+..+.+ |...|+++. ..+++.+
T Consensus 203 r~w~~-~ge~l~~~~g-----------------------------------------------htn~vYsis~~~~~~~I 234 (745)
T KOG0301|consen 203 RLWDL-DGEVLLEMHG-----------------------------------------------HTNFVYSISMALSDGLI 234 (745)
T ss_pred EEEec-cCceeeeeec-----------------------------------------------cceEEEEEEecCCCCeE
Confidence 99999 6888777653 333678888 5567789
Q ss_pred EEccCCCeEEEEeCC
Q 000410 1447 LTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1447 lTgg~Dg~IrlWDl~ 1461 (1553)
+|+|.||++|+|+..
T Consensus 235 vs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 235 VSTGEDRTLRIWKKD 249 (745)
T ss_pred EEecCCceEEEeecC
Confidence 999999999999976
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.4e-21 Score=208.20 Aligned_cols=156 Identities=21% Similarity=0.186 Sum_probs=120.1
Q ss_pred CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++..+ ..+++.+++.|+.||+.||+|||+++ ||+|||++.++.+++ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999864 45999999999999999999999999 999999999999999 9988754211
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----HHHHHhcCCCCC----C
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQYDPS----Q 258 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~~~~~~~----~ 258 (1553)
...|++.|+|||++. +..++.++||||+||++|||++|.+||.... ...+........ .
T Consensus 63 --~~~g~~~y~aPE~~~----------~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (176)
T smart00750 63 --QSRVDPYFMAPEVIQ----------GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRS 130 (176)
T ss_pred --cCCCcccccChHHhc----------CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccc
Confidence 124678999999774 3467889999999999999999999986432 112221111110 0
Q ss_pred CCCCCCC-HHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 259 HLEKIPD-SGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 259 ~~~~~~~-~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
....... ..++++|.+||..||++||++.|+++|..
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 1111111 26999999999999999999999999964
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.2e-19 Score=183.70 Aligned_cols=259 Identities=18% Similarity=0.225 Sum_probs=190.9
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC----CcEEEEE
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH----SAQVVVG 1205 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~----~~~las~ 1205 (1553)
.+...-+.|++.|+|.+|||+|++++|||+|.+||+--.+....+.+ -..+.+..|.+.|.+++|..+ +..++++
T Consensus 80 v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~-g~dle~nmhdgtirdl~fld~~~s~~~il~s~ 158 (350)
T KOG0641|consen 80 VLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNAT-GHDLEFNMHDGTIRDLAFLDDPESGGAILASA 158 (350)
T ss_pred EEeeeccccCccEEEEEecCccCeEEecCCCceEEEEeccccccccc-CcceeeeecCCceeeeEEecCCCcCceEEEec
Confidence 34555677999999999999999999999999999986654332222 245678889999999999753 4566665
Q ss_pred e-CCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccccee
Q 000410 1206 A-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1206 s-~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
+ .|..|++-|... + . .+..+..+.+.+...-.|+ +.++++|+.|.+|++||+|-..++.++
T Consensus 159 gagdc~iy~tdc~~-----g-----~---~~~a~sghtghilalyswn-----~~m~~sgsqdktirfwdlrv~~~v~~l 220 (350)
T KOG0641|consen 159 GAGDCKIYITDCGR-----G-----Q---GFHALSGHTGHILALYSWN-----GAMFASGSQDKTIRFWDLRVNSCVNTL 220 (350)
T ss_pred CCCcceEEEeecCC-----C-----C---cceeecCCcccEEEEEEec-----CcEEEccCCCceEEEEeeeccceeeec
Confidence 4 445555544432 1 1 1122233445566665665 449999999999999999999999888
Q ss_pred ccCCCC-----cceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1285 KAIPEE-----GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1285 ~~~~h~-----g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
.+..|. ..|.+++++|.|+.|++|-.|....+||+|-+.++..+. +|...|.++.| +|. ..+++
T Consensus 221 ~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~-phsadir~vrf-sp~---------a~yll 289 (350)
T KOG0641|consen 221 DNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH-PHSADIRCVRF-SPG---------AHYLL 289 (350)
T ss_pred cCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC-CCccceeEEEe-CCC---------ceEEE
Confidence 765443 469999999999999999999999999999999998875 47778888877 554 35899
Q ss_pred EEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1360 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
+++.|..|++-|+. |.....+... .. ..|...+-.+.
T Consensus 290 t~syd~~ikltdlq-gdla~el~~~---------------------------------------vv---~ehkdk~i~~r 326 (350)
T KOG0641|consen 290 TCSYDMKIKLTDLQ-GDLAHELPIM---------------------------------------VV---AEHKDKAIQCR 326 (350)
T ss_pred EecccceEEEeecc-cchhhcCceE---------------------------------------EE---EeccCceEEEE
Confidence 99999999999986 3322111100 00 11222466788
Q ss_pred cCCCC-eEEEccCCCeEEEEeCC
Q 000410 1440 PLPGG-DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1440 ~sp~g-~llTgg~Dg~IrlWDl~ 1461 (1553)
|+|.. .+++.+.|+++.+|-+.
T Consensus 327 wh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 327 WHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ecCccceeeeccCcceEEEeccC
Confidence 99987 57799999999999763
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.7e-20 Score=207.05 Aligned_cols=278 Identities=15% Similarity=0.215 Sum_probs=207.8
Q ss_pred eeeccccccCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcccc----ccccceeeecCCCceEEEEEecC-CcEEEEE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRKLEKDI----SFRSRLTYHLEGSRALCTMMLRH-SAQVVVG 1205 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~-~laSgS~DGtVkIWD~~~~~~~~----~~~~~~~~~~h~~~I~~l~f~~~-~~~las~ 1205 (1553)
+.+.-.|.+.|+++.+-|... .+||++..+.|.|||..+-.... .+++.+++.+|...-++++|++. .-.+++|
T Consensus 117 i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~ 196 (422)
T KOG0264|consen 117 ISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG 196 (422)
T ss_pred EEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeec
Confidence 344556999999999999765 78888999999999987643211 45667788888887888999885 4578999
Q ss_pred eCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceec
Q 000410 1206 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1206 s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
+.|++|.+||+..... -.+....+.....|...|..++|++.. ..++++++.|+.+.+||+|+++..-...
T Consensus 197 ~~d~~i~lwdi~~~~~-------~~~~~~p~~~~~~h~~~VeDV~~h~~h--~~lF~sv~dd~~L~iwD~R~~~~~~~~~ 267 (422)
T KOG0264|consen 197 SDDHTICLWDINAESK-------EDKVVDPKTIFSGHEDVVEDVAWHPLH--EDLFGSVGDDGKLMIWDTRSNTSKPSHS 267 (422)
T ss_pred cCCCcEEEEecccccc-------CCccccceEEeecCCcceehhhccccc--hhhheeecCCCeEEEEEcCCCCCCCccc
Confidence 9999999999974221 122234455667889999999999985 4599999999999999999642222223
Q ss_pred cCCCCcceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCc-ccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEc
Q 000410 1286 AIPEEGYVSSLVTGPCG-NWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1363 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g-~~LvsGs~dG~l~lWDlr~~~-~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~ 1363 (1553)
...|.+.|+|++|+|.+ ..|++|++|++|.+||+|... ++.++.. |...|.++.| +|... ..+++++.
T Consensus 268 ~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~-H~dev~~V~W-SPh~e--------tvLASSg~ 337 (422)
T KOG0264|consen 268 VKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEG-HEDEVFQVEW-SPHNE--------TVLASSGT 337 (422)
T ss_pred ccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccC-CCcceEEEEe-CCCCC--------ceeEeccc
Confidence 34599999999999955 667899999999999999764 4455544 7778999999 77654 57888889
Q ss_pred CCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCC
Q 000410 1364 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1443 (1553)
Q Consensus 1364 dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~ 1443 (1553)
|+.+.|||+..-...+. .... .+...+.+-.+.+|...|..+.|+|+
T Consensus 338 D~rl~vWDls~ig~eq~--~eda-------------------------------~dgppEllF~HgGH~~kV~DfsWnp~ 384 (422)
T KOG0264|consen 338 DRRLNVWDLSRIGEEQS--PEDA-------------------------------EDGPPELLFIHGGHTAKVSDFSWNPN 384 (422)
T ss_pred CCcEEEEeccccccccC--hhhh-------------------------------ccCCcceeEEecCcccccccccCCCC
Confidence 99999999974321111 0000 00001122234678889999999998
Q ss_pred C--eEEEccCCCeEEEEeCC
Q 000410 1444 G--DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1444 g--~llTgg~Dg~IrlWDl~ 1461 (1553)
. .|+|++.|+.+.+|...
T Consensus 385 ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 385 EPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCeEEEEecCCceEEEeecc
Confidence 7 56699999999999986
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1553 | ||||
| 3gre_A | 437 | Crystal Structure Of Saccharomyces Cerevisiae Vps15 | 3e-10 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 1e-09 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-09 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 3e-09 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 4e-09 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 8e-08 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 8e-08 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-07 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-07 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 7e-07 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 2e-06 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 2e-06 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 2e-06 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 2e-06 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-06 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 2e-06 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-06 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 2e-06 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 2e-06 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 2e-06 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 2e-06 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 2e-06 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 4e-06 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 4e-06 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 5e-06 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 9e-06 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 9e-06 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 9e-06 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 1e-05 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 1e-05 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 2e-05 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-05 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-05 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 3e-05 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 3e-05 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 3e-05 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 3e-05 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 3e-05 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 4e-05 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 4e-05 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 4e-05 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 5e-05 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 5e-05 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 7e-05 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 7e-05 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 7e-05 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 8e-05 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 8e-05 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 8e-05 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 8e-05 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 1e-04 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 1e-04 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 1e-04 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 1e-04 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 1e-04 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 1e-04 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-04 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 1e-04 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 2e-04 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 2e-04 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-04 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 2e-04 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-04 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-04 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 2e-04 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-04 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 2e-04 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 2e-04 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 2e-04 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 2e-04 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 2e-04 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 2e-04 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 3e-04 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-04 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 3e-04 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 3e-04 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 4e-04 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 4e-04 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 4e-04 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 4e-04 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 4e-04 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 5e-04 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 5e-04 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 5e-04 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 5e-04 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 5e-04 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 5e-04 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 6e-04 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 6e-04 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 6e-04 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 6e-04 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 6e-04 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 6e-04 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 6e-04 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 6e-04 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 6e-04 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 6e-04 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 6e-04 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 6e-04 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 6e-04 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 6e-04 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 6e-04 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 6e-04 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 6e-04 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-04 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 7e-04 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 7e-04 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 7e-04 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 7e-04 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 7e-04 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 7e-04 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 7e-04 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 7e-04 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 7e-04 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 7e-04 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 7e-04 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 7e-04 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 7e-04 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 7e-04 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 7e-04 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 7e-04 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 7e-04 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 7e-04 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 7e-04 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 7e-04 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 8e-04 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 8e-04 | ||
| 2nyl_A | 582 | Crystal Structure Of Protein Phosphatase 2a (Pp2a) | 9e-04 | ||
| 3fga_A | 588 | Structural Basis Of Pp2a And Sgo Interaction Length | 9e-04 |
| >pdb|3GRE|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Vps15 Wd Repeat Domain Length = 437 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|2NYL|A Chain A, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 582 | Back alignment and structure |
|
| >pdb|3FGA|A Chain A, Structural Basis Of Pp2a And Sgo Interaction Length = 588 | Back alignment and structure |
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1553 | ||||
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-26 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-25 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-24 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 5e-24 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-23 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 5e-23 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 7e-23 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 9e-23 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-22 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 2e-22 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 2e-22 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 5e-22 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 6e-22 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-21 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-21 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 4e-21 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 6e-21 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-20 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-20 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 3e-20 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 3e-20 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 1e-19 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 1e-19 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 3e-19 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 4e-19 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 5e-19 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 6e-19 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 6e-19 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 6e-19 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 7e-19 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 7e-19 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-18 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 2e-18 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 2e-18 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-18 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 4e-18 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 4e-18 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 5e-18 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 6e-18 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 8e-18 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-17 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-17 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-17 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-17 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-17 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 4e-17 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-16 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 2e-16 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 3e-16 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 5e-16 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 6e-16 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 8e-16 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-15 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-14 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 5e-14 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-14 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-13 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-07 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 0.003 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 3e-13 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 4e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 9e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 6e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-04 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 8e-04 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 0.002 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 2e-12 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 5e-09 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 1e-07 | |
| d1u6gc_ | 1207 | a.118.1.2 (C:) Cullin-associated NEDD8-dissociated | 4e-05 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 2e-12 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-11 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 1e-09 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-06 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-05 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 3e-11 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 1e-09 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 4e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 5e-11 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-10 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 6e-10 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 1e-09 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 3e-09 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 3e-07 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 3e-07 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 4e-04 | |
| d1b3ua_ | 588 | a.118.1.2 (A:) Constant regulatory domain of prote | 7e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-09 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 5e-09 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 9e-04 | |
| d1qgra_ | 876 | a.118.1.1 (A:) Importin beta {Human (Homo sapiens) | 6e-09 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 6e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 6e-08 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-04 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 7e-08 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-07 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 3e-06 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 7e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 5e-04 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 0.001 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-07 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 5e-07 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-06 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 0.002 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 2e-06 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 7e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 8e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-04 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 1e-05 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 1e-05 | |
| d1ibrb_ | 458 | a.118.1.1 (B:) Importin beta {Human (Homo sapiens) | 1e-04 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 4e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 0.002 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-05 | |
| d2bpta1 | 861 | a.118.1.1 (A:1-861) Importin beta {Baker's yeast ( | 9e-05 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 9e-05 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-04 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.001 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 0.001 | |
| d2vglb_ | 579 | a.118.1.10 (B:) Adaptin beta subunit N-terminal fr | 0.003 |
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 109 bits (274), Expect = 1e-26
Identities = 58/296 (19%), Positives = 110/296 (37%), Gaps = 29/296 (9%)
Query: 26 NLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
+ ++LG F +L + +K+ KR +I + R+ +D
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKR--HIIKENKVPYVTRERDVMSRLD 66
Query: 84 HPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
HP F + D+ Y Y N L + ++ +++ A++ H
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
KGI H D+K EN+L+ + ++DF + K P ++ Y++PE
Sbjct: 127 KGIIHRDLKPENILLNEDMHIQITDFGTAK-----VLSPESKQARANSFVGTAQYVSPE- 180
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLE 261
+ + S D++A+GC+I +L PF + L +++ E
Sbjct: 181 ---------LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 231
Query: 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLH 317
K R ++ ++ L+ R E ++ Y + PF + W LH
Sbjct: 232 KFFPK-ARDLVEKLLVLDATKRLGCEE-MEGYGPLK----AHPFFESV--TWENLH 279
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 105 bits (263), Expect = 2e-25
Identities = 53/270 (19%), Positives = 102/270 (37%), Gaps = 26/270 (9%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
+ + LG +F L + + ++ +KV FK ++ E +L E +
Sbjct: 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK--AQLEKAGVEHQLRREVEIQSHLR 64
Query: 84 HPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
HP++ + YL+ +Y ++ L +L A+ CH
Sbjct: 65 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 124
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
K + H DIK EN+L+ S L ++DF + S + T L YL PE
Sbjct: 125 KRVIHRDIKPENLLLGSAGELKIADFGWSV-----HAPSSRRTTLCGT----LDYLPPE- 174
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLE 261
+ + +D++++G + E + + PF ++ Y+R +
Sbjct: 175 ---------MIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 225
Query: 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ + G R +I +++ P R L+
Sbjct: 226 FVTE-GARDLISRLLKHNPSQRPMLREVLE 254
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (258), Expect = 1e-24
Identities = 48/271 (17%), Positives = 96/271 (35%), Gaps = 26/271 (9%)
Query: 29 LKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
+ LG F K ++ E L KV + + E + S DHP+
Sbjct: 16 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE-----EELEDYMVEIDILASCDHPN 70
Query: 87 VWAFQFWQETDKAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLAVKQCHEKG 144
+ + ++L ++ D + L+ + + + Q L A+ H+
Sbjct: 71 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 130
Query: 145 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFY 204
I H D+K N+L T + L+DF D+ ++APE
Sbjct: 131 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ-------RRDSFIGTPYWMAPEVVM 183
Query: 205 EHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSH---LLAYRRGQYDPSQHL 260
++D P D++++G + E+ +E P EL+ LL + +
Sbjct: 184 CET-----SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP 238
Query: 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ + + + ++ + R++ LQ
Sbjct: 239 SRWSSN-FKDFLKKCLEKNVDARWTTSQLLQ 268
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 102 bits (255), Expect = 5e-24
Identities = 45/271 (16%), Positives = 102/271 (37%), Gaps = 23/271 (8%)
Query: 26 NLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
+ +L ++LG F K L + +K K+ + + E + R + +
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKA-LKKDVVLMDDDVECTMVEKRVLSLAWE 61
Query: 84 HPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
HP + +T + + + +Y L + + L + A +++L ++ H
Sbjct: 62 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 121
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
KGI + D+K +N+L+ + ++DF K + + F Y+APE
Sbjct: 122 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTP-------DYIAPE- 173
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLE 261
+ S+D ++ G ++ E+ + + PF + + D +
Sbjct: 174 ---------ILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 224
Query: 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292
+ + +++ + EPE R ++
Sbjct: 225 WLEKE-AKDLLVKLFVREPEKRLGVRGDIRQ 254
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 100 bits (249), Expect = 1e-23
Identities = 56/275 (20%), Positives = 98/275 (35%), Gaps = 24/275 (8%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRG----DYIDLREYERRLFHIRETFRSI 82
KE+LG C H VK+ G +++E + R +
Sbjct: 7 PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKV 66
Query: 83 -DHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQC 140
HP++ + ET+ +L+ L D L+ LS E + + LL +
Sbjct: 67 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICAL 126
Query: 141 HEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAP 200
H+ I H D+K EN+L+ + L+DF D T YLAP
Sbjct: 127 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSC----QLDPGEKLREVCGT----PSYLAP 178
Query: 201 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYRR---GQYDP 256
E + +D+++ G ++ L PF+ +L R G Y
Sbjct: 179 EIIECSMNDNHPGYG----KEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQF 234
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
++ ++ + ++P+ R++AE L
Sbjct: 235 GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.5 bits (245), Expect = 5e-23
Identities = 47/278 (16%), Positives = 94/278 (33%), Gaps = 26/278 (9%)
Query: 21 LPSSYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRET 78
+P + L + LG + + L + E V VK+ + + +
Sbjct: 1 VPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMK----RAVDCPENIKKEICI 56
Query: 79 FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSL-RDRLSTPPFLSLVEKKWLAFQLLLAV 137
+ ++H +V F + YL +Y DR+ + + + QL+ V
Sbjct: 57 NKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV 116
Query: 138 KQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCY 197
H GI H DIK EN+L+ + L +SDF Y++ L Y
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLAT--VFRYNNRERLLN---KMCGTLPY 171
Query: 198 LAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQ 253
+APE +D+++ G V+ + + + + + +
Sbjct: 172 VAPELLKRREFHA---------EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 222
Query: 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+KI + ++ ++ P R + +
Sbjct: 223 KTYLNPWKKIDSA-PLALLHKILVENPSARITIPDIKK 259
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.1 bits (244), Expect = 7e-23
Identities = 45/275 (16%), Positives = 93/275 (33%), Gaps = 27/275 (9%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85
+ + + +G F K V VK+ + + + R H
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAP---TPQQLQAFKNEVGVLRKTRHV 64
Query: 86 HVWAFQFWQETDKAAYLLRQYFFN-SLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEK 143
++ F T ++ Q+ SL L +++ +A Q + H K
Sbjct: 65 NILLF-MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123
Query: 144 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 203
I H D+K N+ + + + DF S F+ + ++APE
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----VKSRWSGSHQFEQLSGSILWMAPEVI 178
Query: 204 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSH----LLAYRRGQYDP-- 256
P D++A G V+ EL ++P+ +++ + RG P
Sbjct: 179 RMQ-------DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
S+ P + +++++ ++ + + R L
Sbjct: 232 SKVRSNCPKA-MKRLMAECLKKKRDERPLFPQILA 265
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 97.9 bits (243), Expect = 9e-23
Identities = 53/270 (19%), Positives = 101/270 (37%), Gaps = 29/270 (10%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
L E+LG + L + V VKV D + R + +++HP
Sbjct: 11 LGEILGFGGMSEVHLARDLRLHRDVAVKVLRA--DLARDPSFYLRFRREAQNAAALNHPA 68
Query: 87 V----WAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH 141
+ + Y++ +Y +LRD + T ++ + A+ H
Sbjct: 69 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 128
Query: 142 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE 201
+ GI H D+K N+++++ N + + DF + + + + T YL+PE
Sbjct: 129 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ----YLSPE 184
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY----RRGQYDP 256
A+ + D++++GCV+ E+ E PF S + R P
Sbjct: 185 ----------QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPP 234
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSA 286
S E + + ++L + PE R+
Sbjct: 235 SARHEGLSAD-LDAVVLKALAKNPENRYQT 263
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 98.6 bits (245), Expect = 1e-22
Identities = 50/282 (17%), Positives = 102/282 (36%), Gaps = 43/282 (15%)
Query: 28 VLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85
V +VLG K + + + +K+ L++ + + +R+ P
Sbjct: 15 VTSQVLGLGINGKVLQIFNKRTQEKFALKM---------LQDCPKARREVELHWRASQCP 65
Query: 86 HV----WAFQFWQETDKAAYLLRQYFFN-SLRDRLST--PPFLSLVEKKWLAFQLLLAVK 138
H+ ++ K ++ + L R+ + E + + A++
Sbjct: 66 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 125
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYL 198
H I H D+K EN+L TS + F S + + Y+
Sbjct: 126 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT-----PYYV 180
Query: 199 APERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--------YR 250
APE V S D++++G ++ L P F +H LA R
Sbjct: 181 APE----------VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 230
Query: 251 RGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
GQY+ P+ ++ + ++ +I ++++ EP R + ++
Sbjct: 231 MGQYEFPNPEWSEVSEE-VKMLIRNLLKTEPTQRMTITEFMN 271
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.9 bits (243), Expect = 2e-22
Identities = 42/279 (15%), Positives = 88/279 (31%), Gaps = 25/279 (8%)
Query: 22 PSSYNLVLKEVLGGSRF---FKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRET 78
PSS + EV+G F + L +D + V K + I +
Sbjct: 24 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV--KSLNRITDIGEVSQFLTEGII 81
Query: 79 FRSIDHPH-VWAFQFWQETDKAAYLLRQYFFNSLRDRLST--PPFLSLVEKKWLAFQLLL 135
+ HP+ + ++ + ++ Y + ++ + Q+
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAK 141
Query: 136 AVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRL 195
+K K H D+ N ++ + ++DF + YD D +
Sbjct: 142 GMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM---YDKEFDSVHNKTGAKLPV 198
Query: 196 CYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSHL--LAYRRG 252
++A E Q D+++ G ++ EL P + + +
Sbjct: 199 KWMALE----------SLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL 248
Query: 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
Q E PD + +++L + E+R S +
Sbjct: 249 QGRRLLQPEYCPDP-LYEVMLKCWHPKAEMRPSFSELVS 286
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 97.0 bits (241), Expect = 2e-22
Identities = 43/270 (15%), Positives = 92/270 (34%), Gaps = 31/270 (11%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRE--TFRSIDH 84
E +G V ++ ++L++ ++ I E R +
Sbjct: 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQ-------MNLQQQPKKELIINEILVMRENKN 76
Query: 85 PHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG 144
P++ + +++ +Y + T + + + + L A++ H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 145 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFY 204
+ H DIK +N+L+ + L+DF T ++APE
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-------KRSTMVGTPYWMAPEVVT 189
Query: 205 EHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLEKI 263
P +DI+++G + E+ E P+ + L A + + L+
Sbjct: 190 RK----------AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP 239
Query: 264 PD--SGIRKMILHMIQLEPELRFSAESYLQ 291
+ R + + ++ E R SA+ LQ
Sbjct: 240 EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.4 bits (237), Expect = 5e-22
Identities = 51/282 (18%), Positives = 105/282 (37%), Gaps = 35/282 (12%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRE--TFRSID 83
+ + +G + + + ++ K DY + E E+++ + E R +
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVW--KELDYGSMTEAEKQML-VSEVNLLRELK 61
Query: 84 HPHVWAFQ--FWQETDKAAYLLRQY-----FFNSLRDRLSTPPFLSLVEKKWLAFQLLLA 136
HP++ + T+ Y++ +Y + + +L + QL LA
Sbjct: 62 HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 121
Query: 137 VKQCHEKG-----ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTG 191
+K+CH + + H D+K NV + + L DF + + + F+
Sbjct: 122 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR----ILNHDTSFA---KAF 174
Query: 192 GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSHLLAYR 250
Y++PE+ DI+++GC++ EL L PF S
Sbjct: 175 VGTPYYMSPEQMNRM----------SYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 224
Query: 251 RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292
+ + + + + ++I M+ L+ R S E L+N
Sbjct: 225 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 266
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.1 bits (236), Expect = 6e-22
Identities = 46/272 (16%), Positives = 88/272 (32%), Gaps = 33/272 (12%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85
L L + +G F +L + V VK I + + H
Sbjct: 8 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKC-------IKNDATAQAFLAEASVMTQLRHS 60
Query: 86 HVWAF-QFWQETDKAAYLLRQYFFN-SLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCH 141
++ E Y++ +Y SL D L + L + + A++
Sbjct: 61 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120
Query: 142 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE 201
H D+ NVLV+ N +SDF K + S DTG + + APE
Sbjct: 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK----------EASSTQDTGKLPVKWTAPE 170
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQH 259
++ D+++ G ++ E++ VP+ + R +
Sbjct: 171 ----------ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 220
Query: 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ +++ + L+ +R S +
Sbjct: 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 95.5 bits (237), Expect = 1e-21
Identities = 49/283 (17%), Positives = 97/283 (34%), Gaps = 26/283 (9%)
Query: 14 TEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERR 71
E + D P L+E +G F + + +V +K G E +
Sbjct: 5 AELFFKDDPEKLFSDLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSYSG--KQSNEKWQD 61
Query: 72 LFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLA 130
+ + + HP+ ++ + A+L+ +Y + L VE +
Sbjct: 62 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT 121
Query: 131 FQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDT 190
L + H + H D+K N+L++ + L DF S + + F T
Sbjct: 122 HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM-------APANSFVGT 174
Query: 191 GGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL-LA 248
++APE + +D++++G EL + P F ++ +
Sbjct: 175 ----PYWMAPEVILAMD-------EGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL 223
Query: 249 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
Y Q + R + +Q P+ R ++E L+
Sbjct: 224 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 94.8 bits (235), Expect = 1e-21
Identities = 43/287 (14%), Positives = 95/287 (33%), Gaps = 22/287 (7%)
Query: 12 SATEYYLHDLPSSYNLVLKEVLGGSRF---FKSILCKHDEGLVLVKVYFKRGDYIDLREY 68
A + ++ S + +++V+G F L + + V + K +
Sbjct: 14 EAVREFAKEIDIS-CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAI--KTLKSGYTEKQ 70
Query: 69 ERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRL--STPPFLSLVEK 126
R DHP+V + ++ ++ N D ++++
Sbjct: 71 RRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL 130
Query: 127 KWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186
+ + +K + H D+ N+LV S +SDF + DP+ S
Sbjct: 131 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 190
Query: 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELS 244
R + AP + Q + D+++ G V+ E+ E P+++++
Sbjct: 191 LGGKIPIR--WTAP----------EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 238
Query: 245 HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ + D S + +++L Q + R +
Sbjct: 239 NQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN 285
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.9 bits (230), Expect = 4e-21
Identities = 46/273 (16%), Positives = 85/273 (31%), Gaps = 26/273 (9%)
Query: 26 NLVLKEVLGGSRF---FKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI 82
+ L +G +F + I + + V + K + T R
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAI--KTCKNCTSDSVREKFLQEALTMRQF 65
Query: 83 DHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQC 140
DHPH+ T+ +++ + LR L + L L A+QL A+
Sbjct: 66 DHPHIVKL-IGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124
Query: 141 HEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAP 200
K H DI NVLV+S + + L DF + + G + ++AP
Sbjct: 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSR------YMEDSTYYKASKGKLPIKWMAP 178
Query: 201 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQ 258
E + D++ G + E+ + PF + + R +
Sbjct: 179 ESI----------NFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 228
Query: 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ + ++ +P R
Sbjct: 229 PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 261
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 94.0 bits (233), Expect = 6e-21
Identities = 44/273 (16%), Positives = 82/273 (30%), Gaps = 33/273 (12%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
+ E LG F K + + +T + HP
Sbjct: 30 IHEELGTGAFGVVHRVTERATGNNFAAKFVMT-----PHESDKETVRKEIQTMSVLRHPT 84
Query: 87 VWAFQFWQETDKAAYLLRQYFFN-SLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKG 144
+ E D ++ ++ L +++ +S E Q+ + HE
Sbjct: 85 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 144
Query: 145 ICHGDIKCENVLVTSW--NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
H D+K EN++ T+ N L L DF D + APE
Sbjct: 145 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHL--------DPKQSVKVTTGTAEFAAPE- 195
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQ 258
VA+ P+ D+++VG + L + F + L + ++
Sbjct: 196 ---------VAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD 246
Query: 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ I ++ +P R + L+
Sbjct: 247 SAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 279
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 92.9 bits (230), Expect = 1e-20
Identities = 38/265 (14%), Positives = 96/265 (36%), Gaps = 24/265 (9%)
Query: 26 NLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
+ ++LG F K IL + +K+ K + I ++ ++
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK--EVIIAKDEVAHTVTESRVLQNTR 63
Query: 84 HPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
HP + A ++ +T + +Y L LS + ++ +++ A++ H
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
+ + + DIK EN+++ + ++DF G +
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDF-------------GLCKEGISDGATMKTFCGTPE 170
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDPSQHLE 261
+ +V +D ++D + +G V+ E+ +PF+ H + + +
Sbjct: 171 YL----APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226
Query: 262 KIPDSGIRKMILHMIQLEPELRFSA 286
+ + ++ +++ +P+ R
Sbjct: 227 TLSPE-AKSLLAGLLKKDPKQRLGG 250
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.6 bits (224), Expect = 2e-20
Identities = 46/275 (16%), Positives = 83/275 (30%), Gaps = 25/275 (9%)
Query: 26 NLVLKEVLGGSRF---FKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI 82
+L L E LG F + V V V + D + E S+
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 83 DHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCH 141
DH ++ T + SL DRL L A Q+ +
Sbjct: 69 DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 142 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE 201
K H D+ N+L+ + + + + DF + D + + AP
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMR----ALPQNDDHYVMQEHRKVPFAWCAP- 183
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSH---LLAYRRGQYDP 256
+ + + D + G + E+F + P+ L+ L +
Sbjct: 184 ---------ESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ E P I +++ +PE R + +
Sbjct: 235 PRP-EDCPQD-IYNVMVQCWAHKPEDRPTFVALRD 267
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 90.4 bits (224), Expect = 3e-20
Identities = 44/274 (16%), Positives = 96/274 (35%), Gaps = 32/274 (11%)
Query: 29 LKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH-- 86
+G F E V V + + + +R E + + HP+
Sbjct: 13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIV 71
Query: 87 --VWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK 143
+++ + K L+ + + +L+ L + + + Q+L ++ H +
Sbjct: 72 RFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR 131
Query: 144 G--ICHGDIKCENVLVTSWNW-LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAP 200
I H D+KC+N+ +T + + D S T ++AP
Sbjct: 132 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT-----LKRASFAKAVIGT----PEFMAP 182
Query: 201 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL--LAYRRGQYDPS 257
E + + S+D++A G + E+ E P+ E + + R
Sbjct: 183 EMY-----------EEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKP 231
Query: 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+K+ ++++I I+ + R+S + L
Sbjct: 232 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.8 bits (222), Expect = 3e-20
Identities = 36/272 (13%), Positives = 87/272 (31%), Gaps = 27/272 (9%)
Query: 26 NLVLKEVLGGSRFFKSILCKH-DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDH 84
+L + LG +F K + V +K+ + E + ++ H
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG------SMSEDEFIEEAKVMMNLSH 58
Query: 85 PHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHE 142
+ + +++ +Y N L + L + + + A++
Sbjct: 59 EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 118
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
K H D+ N LV + +SDF + Y+ D+ + + + PE
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSR--YVLDDEYTSSVGSKFP----VRWSPPEV 172
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHL 260
+ DI+A G ++ E++ ++P+ ++ +
Sbjct: 173 L----------MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 222
Query: 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292
+ + ++ + + R + + L N
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLSN 254
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 89.3 bits (221), Expect = 1e-19
Identities = 75/283 (26%), Positives = 121/283 (42%), Gaps = 36/283 (12%)
Query: 20 DLPSSYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRE 77
D+ Y+ +VLG F + IL + + LV +K K+ L E + +
Sbjct: 6 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKK----ALEGKEGSMENEIA 59
Query: 78 TFRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLA 136
I HP++ A E+ YL+ Q L DR+ F + + L FQ+L A
Sbjct: 60 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA 119
Query: 137 VKQCHEKGICHGDIKCENVLVTSWN---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK 193
VK H+ GI H D+K EN+L S + + +SDF K D S S T
Sbjct: 120 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----MEDPGSVLSTACGT--- 172
Query: 194 RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRR- 251
Y+APE P ++D +++G + L PF++ + + +
Sbjct: 173 -PGYVAPEVL----------AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 221
Query: 252 --GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+Y+ S + + I DS + I H+++ +PE RF+ E LQ
Sbjct: 222 LKAEYEFDSPYWDDISDS-AKDFIRHLMEKDPEKRFTCEQALQ 263
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 89.3 bits (221), Expect = 1e-19
Identities = 45/274 (16%), Positives = 96/274 (35%), Gaps = 34/274 (12%)
Query: 28 VLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85
++ E LG F C + K +G L + E + H
Sbjct: 8 MIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISIL------NIARHR 61
Query: 86 HVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEK 143
++ E+ + ++ ++ + +R++T F L+ E Q+ A++ H
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 144 GICHGDIKCENVLVTSWNW--LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE 201
I H DI+ EN++ + + + +F + RL + APE
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQAR-------------QLKPGDNFRLLFTAPE 168
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH---LLAYRRGQYDPS 257
+ +V Q + + D++++G ++ L PF ++ + +Y
Sbjct: 169 YYA-----PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFD 223
Query: 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ K + ++ E + R +A LQ
Sbjct: 224 EEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 89.0 bits (220), Expect = 3e-19
Identities = 47/273 (17%), Positives = 88/273 (32%), Gaps = 33/273 (12%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
+ E LG F C + + K + + + + HP
Sbjct: 33 ILEELGSGAFGVVHRCVEKATGRVFVAKFINT-----PYPLDKYTVKNEISIMNQLHHPK 87
Query: 87 VWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKG 144
+ E L+ ++ L DR++ + +S E Q +K HE
Sbjct: 88 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 147
Query: 145 ICHGDIKCENVLVTSWNW--LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
I H DIK EN++ + + + DF + T + APE
Sbjct: 148 IVHLDIKPENIMCETKKASSVKIIDFGLATKL-------NPDEIVKVTTATA-EFAAPE- 198
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPSQ 258
+ P+ D++A+G + L + F +L L +R ++ +
Sbjct: 199 ---------IVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE 249
Query: 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ I +++Q EP R + L+
Sbjct: 250 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 282
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 88.4 bits (218), Expect = 4e-19
Identities = 51/272 (18%), Positives = 97/272 (35%), Gaps = 26/272 (9%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEG-----LVLVKVYFKRGDYIDLREYERRLFHIRETFR 80
N L +VLG + K L + G L +KV K+ + + R+
Sbjct: 25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV-LKKATIVQKAKTTEHTRTERQVLE 83
Query: 81 SIDH-PHVWAFQFWQETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVK 138
I P + + +T+ +L+ Y L LS + E + +++LA++
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 143
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYL 198
H+ GI + DIK EN+L+ S + L+DF S F Y
Sbjct: 144 HLHKLGIIYRDIKLENILLDSNGHVVLTDF--------------GLSKEFVADETERAYD 189
Query: 199 APERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQY 254
++ D+ ++D +++G ++ EL F E + R
Sbjct: 190 FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 249
Query: 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 286
+ + + +I ++ +P+ R
Sbjct: 250 KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGC 281
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.8 bits (217), Expect = 5e-19
Identities = 46/265 (17%), Positives = 92/265 (34%), Gaps = 27/265 (10%)
Query: 26 NLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
+ + LG F + L + + +KV K + + + R +
Sbjct: 5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK--EIVVRLKQVEHTNDERLMLSIVT 62
Query: 84 HPHVWAFQFWQETDKAAYLLRQYFFNS-LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
HP + + + +++ Y L L K+ A ++ LA++ H
Sbjct: 63 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 122
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
K I + D+K EN+L+ + ++DF K T Y+APE
Sbjct: 123 KDIIYRDLKPENILLDKNGHIKITDFGFAK----------YVPDVTYTLCGTPDYIAPE- 171
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYRRGQYDPSQHLE 261
V P S+D ++ G +I E L PF++ + + Y + +
Sbjct: 172 ---------VVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 222
Query: 262 KIPDSGIRKMILHMIQLEPELRFSA 286
+ ++ ++ +I + R
Sbjct: 223 FFNED-VKDLLSRLITRDLSQRLGN 246
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 87.9 bits (217), Expect = 6e-19
Identities = 44/260 (16%), Positives = 94/260 (36%), Gaps = 27/260 (10%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
+ LG F + +L KH +K+ + + L++ E L R ++++ P
Sbjct: 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKI-LDKQKVVKLKQIEHTLNEKR-ILQAVNFPF 102
Query: 87 -VWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGI 145
V +++ ++ + L S ++ A Q++L + H +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 146 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 205
+ D+K EN+L+ ++ ++DF K T LAPE
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT----------WTLCGTPEALAPEIILS 212
Query: 206 HGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYRRGQYDPSQHLEKIP 264
++D +A+G +I E PFF + Y + +
Sbjct: 213 K----------GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFS 262
Query: 265 DSGIRKMILHMIQLEPELRF 284
++ ++ +++Q++ RF
Sbjct: 263 SD-LKDLLRNLLQVDLTKRF 281
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.8 bits (214), Expect = 6e-19
Identities = 49/279 (17%), Positives = 94/279 (33%), Gaps = 28/279 (10%)
Query: 22 PSSYNLVLKEVLGGSRF---FKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRET 78
PS ++V+G F +K +L K G V V K +
Sbjct: 6 PSCVTR--QKVIGAGEFGEVYKGML-KTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI 62
Query: 79 FRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLA 136
H ++ + K ++ +Y N D+ S+++ + +
Sbjct: 63 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 122
Query: 137 VKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC 196
+K H D+ N+LV S +SDF + +D + ++ G +
Sbjct: 123 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR----VLEDDPEATYTTSGGKIPIR 178
Query: 197 YLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQY 254
+ APE + D+++ G V+ E+ E P++ELS+ +
Sbjct: 179 WTAPE----------AISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK--AI 226
Query: 255 DPSQHLEKIPD--SGIRKMILHMIQLEPELRFSAESYLQ 291
+ L D S I ++++ Q E R +
Sbjct: 227 NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.3 bits (213), Expect = 6e-19
Identities = 43/275 (15%), Positives = 93/275 (33%), Gaps = 29/275 (10%)
Query: 22 PSSYNLVLKEVLGGSRFFKSILCKH-DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFR 80
PS V + +G +F L ++ V +K + E E
Sbjct: 4 PSELTFV--QEIGSGQFGLVHLGYWLNKDKVAIKTIREG------AMSEEDFIEEAEVMM 55
Query: 81 SIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEK-KWLAFQLLLAVK 138
+ HP + L+ ++ + L D L T L E + + +
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMA 115
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYL 198
E + H D+ N LV + +SDF + ++ D + + + +
Sbjct: 116 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTR--FVLDDQYTSSTGTKFP----VKWA 169
Query: 199 APERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDP 256
+PE V + D+++ G ++ E+F ++P+ S+
Sbjct: 170 SPE----------VFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 219
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ ++ + + +++ H + PE R + L+
Sbjct: 220 RLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLR 254
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.2 bits (213), Expect = 7e-19
Identities = 45/277 (16%), Positives = 99/277 (35%), Gaps = 32/277 (11%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDH 84
L L E LG +F + + ++ V VK + + + + + H
Sbjct: 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQ--GSMSPDAFLAEA----NLMKQLQH 67
Query: 85 PHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWL--AFQLLLAVKQCH 141
+ + T + Y++ +Y N SL D L TP + L K L A Q+ +
Sbjct: 68 QRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 142 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE 201
E+ H D++ N+LV+ ++DF + + + + + APE
Sbjct: 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLI------EDNEYTAREGAKFPIKWTAPE 180
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQH 259
D+++ G ++ E+ +P+ +++ + +
Sbjct: 181 AI----------NYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230
Query: 260 LEKIPDSGIRKMILHMIQLEPELRFSAE---SYLQNY 293
+ +++ + PE R + + S L+++
Sbjct: 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.3 bits (213), Expect = 7e-19
Identities = 34/246 (13%), Positives = 74/246 (30%), Gaps = 19/246 (7%)
Query: 45 KHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104
K V VK+ + L++ L + +D+P++ E + ++
Sbjct: 31 KKVVKTVAVKILKNEANDPALKD---ELLAEANVMQQLDNPYIVRMIGICEAESWMLVME 87
Query: 105 QYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLY 164
L L + L Q+ + +K E H D+ NVL+ + ++
Sbjct: 88 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAK 147
Query: 165 LSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDI 224
+SDF K + + + + APE D+
Sbjct: 148 ISDFGLSKALRADENYYKAQTHGKWP----VKWYAPE----------CINYYKFSSKSDV 193
Query: 225 FAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPEL 282
++ G ++ E F + P+ + + + ++ + E
Sbjct: 194 WSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVEN 253
Query: 283 RFSAES 288
R +
Sbjct: 254 RPGFAA 259
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 85.9 bits (212), Expect = 1e-18
Identities = 40/271 (14%), Positives = 91/271 (33%), Gaps = 25/271 (9%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85
++ +K LGG ++ + + + V V + D +++ E+ + + I HP
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEA----AVMKEIKHP 73
Query: 86 HVWAFQFWQETDKAAYLLRQYFFNSLRDRL---STPPFLSLVEKKWLAFQLLLAVKQCHE 142
++ + Y++ ++ +S V ++A Q+ A++ +
Sbjct: 74 NLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 133
Query: 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPER 202
K H D+ N LV + + ++DF + D + + AP
Sbjct: 134 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM------TGDTYTAHAGAKFPIKWTAP-- 185
Query: 203 FYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHL 260
+ D++A G ++ E+ P+ + Y + D
Sbjct: 186 --------ESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMER 237
Query: 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ + +++ Q P R S Q
Sbjct: 238 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 87.1 bits (215), Expect = 2e-18
Identities = 40/269 (14%), Positives = 90/269 (33%), Gaps = 29/269 (10%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRET---FR 80
+ + ++G F + C+ + + +K K+ I +++ E + R
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKK--RIKMKQGETLALNERIMLSLVS 62
Query: 81 SIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQ 139
+ D P + + T + L LS S + ++ A +++L ++
Sbjct: 63 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 122
Query: 140 CHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLA 199
H + + + D+K N+L+ + +SD D K+
Sbjct: 123 MHNRFVVYRDLKPANILLDEHGHVRISDLGLAC----------------DFSKKKPHASV 166
Query: 200 PERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH--LLAYRRGQYDP 256
Y + + S D F++GC++ +L PF + R
Sbjct: 167 GTHGYMA--PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 224
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFS 285
+ L +R ++ ++Q + R
Sbjct: 225 AVELPDSFSPELRSLLEGLLQRDVNRRLG 253
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 86.0 bits (212), Expect = 2e-18
Identities = 45/296 (15%), Positives = 95/296 (32%), Gaps = 44/296 (14%)
Query: 22 PSSY------NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHI 75
P+ Y ++ ++V+G F + + + + + + KR ++ R
Sbjct: 1 PTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGE 60
Query: 76 RETFRSI-DHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRL----------------ST 117
E + HP++ E YL +Y + +L D L ST
Sbjct: 61 LEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 120
Query: 118 PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177
LS + A + + +K H D+ N+LV ++DF
Sbjct: 121 ASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG-------- 172
Query: 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 236
S + K+ P R+ ++ + + D+++ G ++ E+
Sbjct: 173 ------LSRGQEVYVKKTMGRLPVRWM----AIESLNYSVYTTNSDVWSYGVLLWEIVSL 222
Query: 237 -EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
P+ ++ Y + D + ++ + +P R S L
Sbjct: 223 GGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 278
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 85.6 bits (211), Expect = 2e-18
Identities = 55/272 (20%), Positives = 88/272 (32%), Gaps = 24/272 (8%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRE--TFRSIDH 84
E LG +F C+ K KR R R RE + I H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSILKEIQH 72
Query: 85 PHVWAFQFWQETDKAAYLLRQYF-FNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK 143
P+V E L+ + L D L+ L+ E Q+L V H
Sbjct: 73 PNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 132
Query: 144 GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERF 203
I H D+K EN+++ N D ++F F T ++APE
Sbjct: 133 QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP----EFVAPE-- 186
Query: 204 YEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH---LLAYRRGQYDPSQH 259
+ PL D++++G + L PF + L Y+
Sbjct: 187 --------IVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDE 238
Query: 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ + I ++ +P+ R + + LQ
Sbjct: 239 YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.5 bits (208), Expect = 4e-18
Identities = 51/292 (17%), Positives = 86/292 (29%), Gaps = 47/292 (16%)
Query: 31 EVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVW 88
+ LG +F + +V +K R + + + HP++
Sbjct: 4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 63
Query: 89 AFQFWQETDKAAYLLRQYFFNS-LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICH 147
L+ + L+ K L ++ H+ I H
Sbjct: 64 GLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 123
Query: 148 GDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHG 207
D+K N+L+ L L+DF K P + Y APE
Sbjct: 124 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ-------VVTRWYRAPE------ 170
Query: 208 GEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF-------------------------E 242
+ +D++AVGC++AEL L VPF +
Sbjct: 171 ---LLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD 227
Query: 243 LSHLLAYRRGQYDPSQHLEKIP---DSGIRKMILHMIQLEPELRFSAESYLQ 291
+ L Y + P L I + +I + P R +A L+
Sbjct: 228 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.0 bits (207), Expect = 4e-18
Identities = 54/272 (19%), Positives = 94/272 (34%), Gaps = 34/272 (12%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFK-RGDYIDLREYERRLFHIRETFRSIDHP 85
+ +LG F D V +K K R R+ + +
Sbjct: 8 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSG 67
Query: 86 H--VWAFQFWQETDKAAYLLRQYFFN--SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH 141
V W E + L+ + L D ++ L + +Q+L AV+ CH
Sbjct: 68 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 127
Query: 142 EKGICHGDIKCENVLVT-SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAP 200
G+ H DIK EN+L+ + L L DF S + ++ F T Y P
Sbjct: 128 NCGVLHRDIKDENILIDLNRGELKLIDFGSGA-----LLKDTVYTDFDGTRV----YSPP 178
Query: 201 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYRRGQYDPSQH 259
E + S ++++G ++ + + ++PF ++ RGQ Q
Sbjct: 179 E---------WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII---RGQVFFRQR 226
Query: 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ S + +I + L P R + E
Sbjct: 227 V----SSECQHLIRWCLALRPSDRPTFEEIQN 254
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 84.7 bits (209), Expect = 5e-18
Identities = 45/298 (15%), Positives = 86/298 (28%), Gaps = 41/298 (13%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
+ LG H ++ K+ ++ + +
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----PAIRNQIIRELQVLHECN 62
Query: 84 HPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE 142
P++ F +D + ++ SL L + ++ ++ + E
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 143 K-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLC----Y 197
K I H D+K N+LV S + L DF D+ Y
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-------------QLIDSMANSFVGTRSY 169
Query: 198 LAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRG 252
++PE Q DI+++G + E+ + P L+ +
Sbjct: 170 MSPE----------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQV 219
Query: 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPT-YFSPFLHNF 309
+ D ++ + G M P F Y+ N P+ FS +F
Sbjct: 220 EGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDF 277
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.6 bits (206), Expect = 6e-18
Identities = 41/275 (14%), Positives = 89/275 (32%), Gaps = 28/275 (10%)
Query: 26 NLVLKEV-LGGSRF---FKSILCKHDEGL-VLVKVYFKRGDYIDLREYERRLFHIRETFR 80
NL++ ++ LG F + + + + V +KV + + D E R +
Sbjct: 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA----QIMH 64
Query: 81 SIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRL-STPPFLSLVEKKWLAFQLLLAVK 138
+D+P++ + + L+ + L L + + L Q+ + +K
Sbjct: 65 QLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMK 123
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYL 198
EK H D+ NVL+ + ++ +SDF K + G L +
Sbjct: 124 YLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSK----ALGADDSYYTARSAGKWPLKWY 179
Query: 199 APERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDP 256
AP + D+++ G + E + P+ ++ +
Sbjct: 180 AP----------ECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 229
Query: 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ ++ + E R + Q
Sbjct: 230 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 264
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 83.7 bits (206), Expect = 8e-18
Identities = 34/278 (12%), Positives = 69/278 (24%), Gaps = 32/278 (11%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
L +G F L V +K+ ++ +L + ++ +
Sbjct: 11 LGRKIGSGSFGDIYLGTDIAAGEEVAIKL-------ECVKTKHPQLHIESKIYKMMQGGV 63
Query: 87 VWAFQFWQETDKAAYLLRQYFFNS--LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG 144
W + ++ SL LA Q++ ++ H K
Sbjct: 64 GIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123
Query: 145 ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKR---LCYLAPE 201
H D+K +N L+ L F D + + Y +
Sbjct: 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASIN 183
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQYDP 256
D+ ++G V+ L ++ R +
Sbjct: 184 ----------THLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM 233
Query: 257 SQHLEKIPD---SGIRKMILHMIQLEPELRFSAESYLQ 291
S +E + S + L + + Q
Sbjct: 234 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.0 bits (204), Expect = 1e-17
Identities = 55/300 (18%), Positives = 94/300 (31%), Gaps = 47/300 (15%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85
+VL+E +G RF + K V VK++ R + RE E + H
Sbjct: 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIY------QTVMLRHE 57
Query: 86 HVWAFQFWQETDKAA----YLLRQYFFN-SLRDRLSTPPF-------LSLVEKKWLAFQL 133
++ F D +L+ Y + SL D L+ L+L LA
Sbjct: 58 NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 117
Query: 134 LLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK 193
+ V + I H D+K +N+LV ++D + D D + G K
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL-GLAVRHDSATDTIDIAPNHRVGTK 176
Query: 194 RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR-- 251
R Y+APE + DI+A+G V E+ +
Sbjct: 177 R--YMAPEVLDDSINMKHF----ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230
Query: 252 ---GQYDPSQHLEKIPDSGIR-----------------KMILHMIQLEPELRFSAESYLQ 291
+ + + + +R K++ R +A +
Sbjct: 231 LVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.3 bits (205), Expect = 2e-17
Identities = 43/302 (14%), Positives = 85/302 (28%), Gaps = 56/302 (18%)
Query: 26 NLVLKEVLGGSRFFKSILCKHDEG-------LVLVKVYFKRGDYIDLREYERRLFHIRET 78
NL +VLG F K + V VK+ ++ D + L +
Sbjct: 38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT-- 95
Query: 79 FRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRL---------------------- 115
+ H ++ YL+ +Y L + L
Sbjct: 96 -QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 154
Query: 116 -STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174
L+ + A+Q+ ++ K H D+ NVLVT + + DF +
Sbjct: 155 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDI 214
Query: 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234
+ ++APE + D+++ G ++ E+
Sbjct: 215 M-----SDSNYVVRGNARLPVKWMAPESL----------FEGIYTIKSDVWSYGILLWEI 259
Query: 235 FL--EVPFFELSH---LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 289
F P+ + + + Q + I ++ + R S +
Sbjct: 260 FSLGVNPYPGIPVDANFYKLIQNGFKMDQP-FYATEE-IYIIMQSCWAFDSRKRPSFPNL 317
Query: 290 LQ 291
Sbjct: 318 TS 319
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.3 bits (205), Expect = 2e-17
Identities = 36/268 (13%), Positives = 79/268 (29%), Gaps = 20/268 (7%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
+VLG F + V + V K + + + S+D+PH
Sbjct: 13 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPH 72
Query: 87 VWAFQFWQETDKAAYLLRQYFFNSLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGI 145
V T + + F L D + + Q+ + ++ +
Sbjct: 73 VCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRL 132
Query: 146 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 205
H D+ NVLV + + ++DF K + + + G + ++A E
Sbjct: 133 VHRDLAARNVLVKTPQHVKITDFGLAK-----LLGAEEKEYHAEGGKVPIKWMALE---- 183
Query: 206 HGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKI 263
D+++ G + EL P+ + + I
Sbjct: 184 ------SILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI 237
Query: 264 PDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ +++ ++ + R +
Sbjct: 238 CTIDVYMIMVKCWMIDADSRPKFRELII 265
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 83.3 bits (205), Expect = 2e-17
Identities = 58/307 (18%), Positives = 97/307 (31%), Gaps = 52/307 (16%)
Query: 20 DLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETF 79
D+ Y + +G + + V V + K+ + + Y +R +
Sbjct: 5 DVGPRYTNL--SYIGEGAYGMVCSAYDNVNKVRVAI--KKISPFEHQTYCQRTLREIKIL 60
Query: 80 RSIDHPHV----WAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLL 135
H ++ + L + + +L LS + +Q+L
Sbjct: 61 LRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILR 120
Query: 136 AVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRL 195
+K H + H D+K N+L+ + L + DF + D D + F
Sbjct: 121 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----VADPDHDHTGFLTEYVATR 176
Query: 196 CYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRR 251
Y APE G S+DI++VGC++AE+ P F L L
Sbjct: 177 WYRAPEIMLNSKGYT---------KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 227
Query: 252 GQYDPSQ-------------------HLEKIP--------DSGIRKMILHMIQLEPELRF 284
PSQ H K+P DS ++ M+ P R
Sbjct: 228 ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 287
Query: 285 SAESYLQ 291
E L
Sbjct: 288 EVEQALA 294
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.6 bits (203), Expect = 2e-17
Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 43/303 (14%)
Query: 12 SATEYYLHD---LPSSYNLVLKEVLGGSRF-------FKSILCKHDEGLVLVKVYFKRGD 61
SA + Y+ D + + + LG F K ++ E V +K +
Sbjct: 5 SAADVYVPDEWEVARE-KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 63
Query: 62 YIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRL----- 115
+ E+ + + HV + ++ + L+ L
Sbjct: 64 MRERIEFLNEA----SVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRP 119
Query: 116 -----STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170
SL + +A ++ + + H D+ N +V + + DF
Sbjct: 120 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM 179
Query: 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCV 230
+ Y +D+ G + +++PE +D D+++ G V
Sbjct: 180 TRDIY-----ETDYYRKGGKGLLPVRWMSPE----------SLKDGVFTTYSDVWSFGVV 224
Query: 231 IAELFL--EVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAES 288
+ E+ E P+ LS+ R + +++ Q P++R S
Sbjct: 225 LWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLE 284
Query: 289 YLQ 291
+
Sbjct: 285 IIS 287
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 81.8 bits (201), Expect = 4e-17
Identities = 49/301 (16%), Positives = 93/301 (30%), Gaps = 55/301 (18%)
Query: 26 NLVLKEVLGGSRF-------FKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRET 78
N+ +G F +L +V VK+ + + +
Sbjct: 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS----ADMQADFQREAAL 69
Query: 79 FRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRL---------------------- 115
D+P++ K LL +Y L + L
Sbjct: 70 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 129
Query: 116 --STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173
PP LS E+ +A Q+ + E+ H D+ N LV + ++DF +
Sbjct: 130 SSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRN 189
Query: 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233
Y +D+ + ++ PE + + D++A G V+ E
Sbjct: 190 IY-----SADYYKADGNDAIPIRWMPPESIFYN----------RYTTESDVWAYGVVLWE 234
Query: 234 LFL--EVPFFELSHL-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 290
+F P++ ++H + Y + E P + ++ P R S S
Sbjct: 235 IFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLE-LYNLMRLCWSKLPADRPSFCSIH 293
Query: 291 Q 291
+
Sbjct: 294 R 294
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 80.1 bits (197), Expect = 1e-16
Identities = 40/285 (14%), Positives = 87/285 (30%), Gaps = 32/285 (11%)
Query: 26 NLVLKEVLGGSRFFKSILCKH-DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDH 84
+L L+ LG F + + V +K + + + H
Sbjct: 18 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG------TMSPEAFLQEAQVMKKLRH 71
Query: 85 PHVWAFQFWQETDKAAYLLRQYFFNSLRDRL---STPPFLSLVEKKWLAFQLLLAVKQCH 141
+ + Y++ +Y T +L L + +A Q+ +
Sbjct: 72 EKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130
Query: 142 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE 201
H D++ N+LV ++DF + + + + AP
Sbjct: 131 RMNYVHRDLRAANILVGENLVCKVADFGLARLI------EDNEYTARQGAKFPIKWTAP- 183
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--EVPFFELSHLLAYRRGQYDPSQH 259
+ A D+++ G ++ EL VP+ + + + +
Sbjct: 184 ---------EAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 234
Query: 260 LEKIPDSGIRKMILHMIQLEPELRFSAE---SYLQNYAAVVFPTY 301
+ ++ + EPE R + E ++L++Y P Y
Sbjct: 235 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 279
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 79.5 bits (195), Expect = 2e-16
Identities = 41/280 (14%), Positives = 78/280 (27%), Gaps = 34/280 (12%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
+ +G F + + V +K +R D LR+ R +
Sbjct: 9 VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLA------GCTG 62
Query: 87 VWAFQFWQETDKAAYLLRQYFFNSLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGI 145
+ ++ + L+ SL D L S+ A Q+L V+ HEK +
Sbjct: 63 IPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSL 122
Query: 146 CHGDIKCENVLVTS-----WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAP 200
+ DIK +N L+ N +Y+ DF K P Y++
Sbjct: 123 VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSI 182
Query: 201 ERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF---------ELSHLLAYRR 251
D+ A+G V + + + ++
Sbjct: 183 N----------THLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK 232
Query: 252 GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ P+ K + + L + +
Sbjct: 233 QSTPLRELCAGFPEE-FYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 79.2 bits (194), Expect = 3e-16
Identities = 59/322 (18%), Positives = 105/322 (32%), Gaps = 68/322 (21%)
Query: 29 LKEVLGGSRF---FKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85
+G + FK+ K+ V +K + + R + + +HP
Sbjct: 11 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHP 70
Query: 86 HV-----WAFQFWQETDKAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLAVK 138
+V + + L+ ++ L L P + K + FQLL +
Sbjct: 71 NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLD 130
Query: 139 QCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYL 198
H + H D+K +N+LVTS + L+DF + Y + T L Y
Sbjct: 131 FLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR----IYSFQMALTSVVVT----LWYR 182
Query: 199 APERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE---------------- 242
AP +V + +D+++VGC+ AE+F P F
Sbjct: 183 AP----------EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 232
Query: 243 ------------LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 290
L + + + + I + G + ++L + P R SA S L
Sbjct: 233 LPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELG-KDLLLKCLTFNPAKRISAYSAL 291
Query: 291 QNYAAVVFPTYFSPFLHNFYCC 312
P+ + C
Sbjct: 292 S-----------HPYFQDLERC 302
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.4 bits (192), Expect = 5e-16
Identities = 53/299 (17%), Positives = 99/299 (33%), Gaps = 52/299 (17%)
Query: 26 NLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
N E +G + ++ +V +K + + ++
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELN 59
Query: 84 HPHVWAFQFWQETDKAAYLLRQYFFNSLRD--RLSTPPFLSLVEKKWLAFQLLLAVKQCH 141
HP++ T+ YL+ ++ L+ S + L K FQLL + CH
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 142 EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPE 201
+ H D+K +N+L+ + + L+DF + +P + L Y APE
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-------TYTHEVVTLWYRAPE 172
Query: 202 RFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPS 257
++DI+++GC+ AE+ F E+ L R P
Sbjct: 173 ILLGCKYYS---------TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 258 QHLEKIP-------------------------DSGIRKMILHMIQLEPELRFSAESYLQ 291
+ + D R ++ M+ +P R SA++ L
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 77.6 bits (190), Expect = 6e-16
Identities = 49/294 (16%), Positives = 97/294 (32%), Gaps = 50/294 (17%)
Query: 29 LKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHV 87
E +G + +++ G +K + + + H ++
Sbjct: 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED---EGIPSTTIREISILKELKHSNI 62
Query: 88 WAFQFWQETDKAAYLLRQYFFNSLRDRL-STPPFLSLVEKKWLAFQLLLAVKQCHEKGIC 146
T K L+ ++ L+ L L V K QLL + CH++ +
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 147 HGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEH 206
H D+K +N+L+ L ++DF + F ++ + +Y
Sbjct: 123 HRDLKPQNLLINREGELKIADF--------------GLARAFGIPVRKYTHEIVTLWYRA 168
Query: 207 GGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQYDPS----- 257
+ ++DI++VGC+ AE+ P F E L+ R P+
Sbjct: 169 --PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226
Query: 258 --------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ K D ++ M++L+P R +A+ L+
Sbjct: 227 NVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.0 bits (191), Expect = 8e-16
Identities = 46/294 (15%), Positives = 95/294 (32%), Gaps = 46/294 (15%)
Query: 26 NLVLKEVLGGSRFFKSILCKH---------DEGLVLVKVYFKRGDYIDLREYERRLFHIR 76
LVL + LG F + +L + V VK+ DL + + ++
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73
Query: 77 ETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRL----------------STPP 119
H ++ D Y++ +Y +LR+ L +
Sbjct: 74 ---MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 130
Query: 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179
LS + A+Q+ ++ K H D+ NVLVT N + ++DF + +
Sbjct: 131 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY 190
Query: 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL--E 237
+ ++APE D D+++ G ++ E+F
Sbjct: 191 YKKTTNGRLPVK-----WMAPEAL----------FDRIYTHQSDVWSFGVLLWEIFTLGG 235
Query: 238 VPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
P+ + ++ + + + M+ P R + + ++
Sbjct: 236 SPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.9 bits (188), Expect = 2e-15
Identities = 59/315 (18%), Positives = 103/315 (32%), Gaps = 63/315 (20%)
Query: 29 LKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
E +G + K+ E +V +K D + R + + + H +
Sbjct: 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICL---LKELKHKN 62
Query: 87 -VWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGI 145
V K + + + S L K FQLL + CH + +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 146 CHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYE 205
H D+K +N+L+ L L++F + IP S L Y P+ +
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE-------VVTLWYRPPDVLFG 175
Query: 206 HGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFF----ELSHLLAYRRGQYDPSQH- 259
S+D+++ GC+ AEL P F L R P++
Sbjct: 176 AK---------LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226
Query: 260 ---LEKIPD---------------------SGIRKMILHMIQLEPELRFSAESYLQNYAA 295
+ K+PD + R ++ ++++ P R SAE LQ+
Sbjct: 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH--- 283
Query: 296 VVFPTYFSPFLHNFY 310
P+ +F
Sbjct: 284 --------PYFSDFC 290
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.8 bits (180), Expect = 3e-14
Identities = 53/333 (15%), Positives = 95/333 (28%), Gaps = 67/333 (20%)
Query: 20 DLPSSYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRE 77
++P Y + +G + V VK + I + +R +
Sbjct: 15 EVPERYQNL--SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI---IHAKRTYRELR 69
Query: 78 TFRSIDHPHVWAFQFWQET-----DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQ 132
+ + H +V + L + + + + L+ ++L +Q
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ 129
Query: 133 LLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG 192
+L +K H I H D+K N+ V L + DF
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF----------GLARHTDDEMTGYV 179
Query: 193 KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLA 248
Y APE ++DI++VGC++AEL F + L
Sbjct: 180 ATRWYRAPEIMLNWM---------HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 249 YRRGQYDPSQHLEKIPDSGIRKM---------------------------ILHMIQLEPE 281
R P L K S + + M+ L+ +
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 282 LRFSAE-----SYLQNYAAVVFPTYFSPFLHNF 309
R +A +Y Y P+ +F
Sbjct: 291 KRITAAQALAHAYFAQYHDPDDEPVADPYDQSF 323
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.6 bits (177), Expect = 5e-14
Identities = 50/336 (14%), Positives = 100/336 (29%), Gaps = 74/336 (22%)
Query: 29 LKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH 86
+G F + +H V +K + + + + + H +
Sbjct: 14 KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHEN 70
Query: 87 VWAF--------QFWQETDKAAYLLRQYF-FNSLRDRLSTPPFLSLVEKKWLAFQLLLAV 137
V + + YL+ + + + +L E K + LL +
Sbjct: 71 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 130
Query: 138 KQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCY 197
H I H D+K NVL+T L L+DF + S + + + Y
Sbjct: 131 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR--AFSLAKNSQPNRYTNRVVTL-WY 187
Query: 198 LAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF----ELSHLLAYRRGQ 253
PE + + P +D++ GC++AE++ P E L +
Sbjct: 188 RPPE---------LLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 238
Query: 254 YDPSQHL----------------------------EKIPDSGIRKMILHMIQLEPELRFS 285
+ + + D +I ++ L+P R
Sbjct: 239 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID 298
Query: 286 AESYLQNYAAVVFPTYFSPFLHNFYCCWNPLHSDMR 321
++ L F + +P+ SD++
Sbjct: 299 SDDALN-----------HDFFWS-----DPMPSDLK 318
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.5 bits (177), Expect = 7e-14
Identities = 66/328 (20%), Positives = 107/328 (32%), Gaps = 68/328 (20%)
Query: 6 AKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYI 63
+K T AT D P + +V+G F K + LV +K + +
Sbjct: 1 SKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK 60
Query: 64 DLREYERRLFHIRETFRSIDHPHV----WAFQFWQETDKAAYL------LRQYFFNSLRD 113
+ RE + R +DH ++ + F E YL + + + R
Sbjct: 61 N-RE--------LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH 111
Query: 114 RLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFK 172
L ++ K +QL ++ H GICH DIK +N+L+ L L DF S K
Sbjct: 112 YSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
Query: 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 232
+ +P + Y APE + S+D+++ GCV+A
Sbjct: 172 --QLVRGEP------NVSYICSRYYRAPELIFGAT---------DYTSSIDVWSAGCVLA 214
Query: 233 ELFL-EVPFFELSHLLAYRR-----GQYDPSQHLEKIPDSGIRKM--------------- 271
EL L + F S + G Q E P+ K
Sbjct: 215 ELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPR 274
Query: 272 --------ILHMIQLEPELRFSAESYLQ 291
+++ P R +
Sbjct: 275 TPPEAIALCSRLLEYTPTARLTPLEACA 302
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 71.7 bits (174), Expect = 1e-13
Identities = 52/347 (14%), Positives = 103/347 (29%), Gaps = 44/347 (12%)
Query: 1125 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYH 1184
W PR L H S V + S VSAS+D+T+KVWD + F L H
Sbjct: 3 WIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD----FERTLKGH 58
Query: 1185 LEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGA 1244
+ + + + F R + +
Sbjct: 59 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN--------------- 103
Query: 1245 IVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNW 1304
V+ + + ++++ I +W+ ++ T +V + G
Sbjct: 104 ----VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG--HREWVRMVRPNQDGTL 157
Query: 1305 FVSGSSRGVLTLWDLRFLVPV-------NSWQYSQVCPIEKMCLFVPPPNAAVSTTARPL 1357
S S+ + +W + + + P + + +P
Sbjct: 158 IASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPG 217
Query: 1358 IYVAAGC--NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPS--SRSNPKTDLR 1413
++ +G + +W+ G C L D + + + S ++ KT
Sbjct: 218 PFLLSGSRDKTIKMWDVSTGMCLMTLV----GHDNWVRGVLFHSGGKFILSCADDKTLRV 273
Query: 1414 RNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGGTDLKIRRWD 1459
+ K + LN + SL + TG D ++ W+
Sbjct: 274 WDYKNKRCMKTLNAHEHF---VTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 51.7 bits (122), Expect = 4e-07
Identities = 32/207 (15%), Positives = 62/207 (29%), Gaps = 13/207 (6%)
Query: 1010 SDSVLQVNSLGIGSSTMPWMDTTNQSFSLASSVPPPNLVSGSF--SISNGSKQFYRVVHE 1067
D +++ + G + + + + S S ++ E
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180
Query: 1068 PEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRP 1127
+ + A GS P L+G S +T + D
Sbjct: 181 LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSG--SRDKTIKMWD---VS 235
Query: 1128 RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEG 1187
G+ + L H + V + F +S +DD T++VWD + L H
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC----MKTLNAH--E 289
Query: 1188 SRALCTMMLRHSAQVVVGACDGIIHMF 1214
+ + VV G+ D + ++
Sbjct: 290 HFVTSLDFHKTAPYVVTGSVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 39.3 bits (90), Expect = 0.003
Identities = 41/297 (13%), Positives = 83/297 (27%), Gaps = 33/297 (11%)
Query: 1270 IHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ 1329
I +WD + TLK V + G S S+ + LWD + + +
Sbjct: 41 IKVWDYETGDFERTLKG--HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH 98
Query: 1330 YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCH--------QVL 1381
+ + S ++ V + ++
Sbjct: 99 GHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 158
Query: 1382 RTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441
+ + D + + + R + + + ++E
Sbjct: 159 ASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS---ETKKSGK 215
Query: 1442 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPN-----LKGVGNDEFYETRSSSGVQVVQE 1496
PG LL+G D I+ WD + + G + + +F + + V +
Sbjct: 216 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 275
Query: 1497 RKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553
K + L A H + SL +++ S D +KVW+
Sbjct: 276 YKNKRCMKTLNA--------------HEHFVTSL-DFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.6 bits (172), Expect = 3e-13
Identities = 48/333 (14%), Positives = 99/333 (29%), Gaps = 67/333 (20%)
Query: 20 DLPSSYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRE 77
++ + Y + + +G + V +K ++ + +R +
Sbjct: 15 EVRAVYRDL--QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRP---FQSELFAKRAYRELR 69
Query: 78 TFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-----NSLRDRLSTPPFLSLVEKKWLAFQ 132
+ + H +V D+ ++ + +L L ++L +Q
Sbjct: 70 LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQ 129
Query: 133 LLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG 192
+L ++ H GI H D+K N+ V L + DF +
Sbjct: 130 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM----------TGYV 179
Query: 193 KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE-LFLEVPFFELSHLLAYR- 250
Y APE + ++DI++VGC++AE + + F HL +
Sbjct: 180 VTRWYRAPE---------VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKE 230
Query: 251 --RGQYDPSQHLEKIPDSGIRKM---------------------------ILHMIQLEPE 281
+ P + S K + M+ L+ E
Sbjct: 231 IMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAE 290
Query: 282 LRFSAE-----SYLQNYAAVVFPTYFSPFLHNF 309
R +A Y ++ + +F
Sbjct: 291 QRVTAGEALAHPYFESLHDTEDEPQVQKYDDSF 323
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.5 bits (169), Expect = 4e-13
Identities = 42/291 (14%), Positives = 85/291 (29%), Gaps = 40/291 (13%)
Query: 26 NLVLKEVLGGSRF---FKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI 82
L L + LG F ++ D+ V K R L + I
Sbjct: 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 73
Query: 83 DHPH--VWAFQFWQETDKAAYLL-----------------RQYFFNSLRDRLSTPPFLSL 123
H V + ++ ++ + FL+L
Sbjct: 74 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 133
Query: 124 VEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183
+FQ+ ++ + H D+ N+L++ N + + DF + Y D
Sbjct: 134 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY----KDPD 189
Query: 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF--LEVPFF 241
+ D L ++A + D D+++ G ++ E+F P+
Sbjct: 190 YVRKGDARLP-LKWMA----------PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 238
Query: 242 ELSHL-LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291
+ RR + + + +L EP R + ++
Sbjct: 239 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 289
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 69.8 bits (169), Expect = 9e-13
Identities = 40/300 (13%), Positives = 87/300 (29%), Gaps = 44/300 (14%)
Query: 1126 RPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE------------- 1172
R + + +H S V + S+D + + + T +V+
Sbjct: 49 REIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNK-TTQVYRVSDGSLVARLSDDSAANK 107
Query: 1173 -----------------KDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFS 1215
+ + F + G+ + + +V G
Sbjct: 108 DPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY 167
Query: 1216 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNC-------ASHMFMYSTQNC 1268
+ SG ++ D + G ++ + +
Sbjct: 168 SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDR 227
Query: 1269 GIHLWDTRSNSNTWTLKAIPE-----EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV 1323
+ +WD+ + L + E + V S+V G VSGS + LW+L+
Sbjct: 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 287
Query: 1324 PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR-PLIYVAAGCNEVSLWNAENGSCHQVLR 1382
+ + E + +V+TT I + V W+ ++G+ +L+
Sbjct: 288 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.8 bits (104), Expect = 6e-05
Identities = 44/351 (12%), Positives = 104/351 (29%), Gaps = 70/351 (19%)
Query: 1244 AIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE-------------- 1289
++V V ++ D ++ + N ++ S L
Sbjct: 63 SVVCCVKFSNDG----EYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 1290 --EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPN 1347
+ Y+ S+ P G + +G+ ++ +WD+ V Q +
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD-- 176
Query: 1348 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSN 1407
+ +G + ++ + + L + DG T ++ P ++ S
Sbjct: 177 -----------KLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 225
Query: 1408 PKTDLRRNVNQKYRVDELNEPPPRLLG----IRSLLPLPGGD-LLTGGTDLKIRRWDHCS 1462
+ + + V+ L+ G + S++ G +++G D ++ W+ +
Sbjct: 226 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQN 285
Query: 1463 PGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSA-- 1520
PN V Q + + + + D
Sbjct: 286 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY------------ILSGSKDRGVL 333
Query: 1521 -------------GCHRDSILSL-----GSVKLNQRLLISSSRDGAIKVWK 1553
HR+S++S+ S+ + + S D ++WK
Sbjct: 334 FWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.0 bits (102), Expect = 1e-04
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Query: 1125 WRPR-GILVAHLQEHCSAVNEIAISHDHSF------FVSASDDSTVKVWDSRKL 1171
W + G + LQ H ++V +A+++ S F + S D ++W +K+
Sbjct: 335 WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.3 bits (95), Expect = 8e-04
Identities = 15/119 (12%), Positives = 35/119 (29%), Gaps = 1/119 (0%)
Query: 1102 ASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSA-VNEIAISHDHSFFVSASDD 1160
S D + ++ ++ P V +A + + + +S S D
Sbjct: 270 VSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD 329
Query: 1161 STVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1219
V WD + + + + + A + + G+ D ++ I
Sbjct: 330 RGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 388
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.8 bits (91), Expect = 0.002
Identities = 33/250 (13%), Positives = 77/250 (30%), Gaps = 36/250 (14%)
Query: 1116 RTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI 1175
R S + P + + + + S D F + ++D +++WD + +
Sbjct: 98 RLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM 157
Query: 1176 SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKY------ 1229
+ L + + +S G
Sbjct: 158 ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG 217
Query: 1230 ----SGISD--IKKKDTKEGAIVTLVNYNTDNCASH--------------MFMYSTQNCG 1269
+G D ++ D++ G +V ++ ++ H + + +
Sbjct: 218 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 277
Query: 1270 IHLWDTRSNSN----------TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDL 1319
+ LW+ ++ +N T + I + +V S+ T + +SGS + WD
Sbjct: 278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 337
Query: 1320 RFLVPVNSWQ 1329
+ P+ Q
Sbjct: 338 KSGNPLLMLQ 347
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 70.2 bits (170), Expect = 2e-12
Identities = 48/350 (13%), Positives = 102/350 (29%), Gaps = 20/350 (5%)
Query: 513 PHYRRAAILLLK---SSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLV 569
+R A L D+D ++V+ ++ +L D V+ A++ L PLV
Sbjct: 17 KDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLG---PLV 73
Query: 570 RNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGV 629
E I+ L +E +R + + + + L+
Sbjct: 74 SKVKEYQV----ETIVDTLCTNMLSDKEQLRDISSIGLKTV-IGELPPASSGSALAANVC 128
Query: 630 LDKLSAPHKSPSSSNETSVQLQRLNADVQL-----SQLRKSIAEVVQELVMGPK-QTPSI 683
+ + + SVQL+ L+ + L ++ L+ ++
Sbjct: 129 KKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAV 188
Query: 684 RRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVE 743
R+ + +G+L G D + +L + + I + G R E
Sbjct: 189 RKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGE 248
Query: 744 --EYLLPYIEQALSDATEAVIVNALDCLAILCKS-GYLRKRILLEMIERAFPLLCYPSQW 800
E ++P + + + + + + + + +I L Y +
Sbjct: 249 YLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNY 308
Query: 801 VRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCL 850
A G D A+ K L + +
Sbjct: 309 NYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVV 358
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.6 bits (140), Expect = 5e-09
Identities = 60/417 (14%), Positives = 123/417 (29%), Gaps = 34/417 (8%)
Query: 424 STFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPF 483
++F + + + + L + + + + ++ L L+SE D + F
Sbjct: 653 ASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISF 712
Query: 484 LPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHV 543
L + S+L + V+ P + A+ + + +
Sbjct: 713 LTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDL 772
Query: 544 IAMLSDPAAIVRCAAL--ETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRI 601
+ ML+ P A ++ I V + K P + + + +
Sbjct: 773 LRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIR 832
Query: 602 CYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQ 661
A L + G + H I LS L + S S + A L
Sbjct: 833 LLA-------LLSLGEVGHHIDLSGQLELKSVILEAFSSPSEE------VKSAASYALGS 879
Query: 662 L-RKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAF---LND 717
+ ++ E + ++ P + LL + + S ++ I
Sbjct: 880 ISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCEC 939
Query: 718 RDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLA-ILCKSG 776
+E R V V C E LLP ++ L + + + + +
Sbjct: 940 AEEGTRNV-----VAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHP 994
Query: 777 YLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFL 833
+L I L P VRR + +++ + + +IR L
Sbjct: 995 QPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPS---------LIRDLL 1042
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (129), Expect = 1e-07
Identities = 39/304 (12%), Positives = 100/304 (32%), Gaps = 17/304 (5%)
Query: 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESV 599
+ +++ ++ R A L L ++ D + ++ M+ L +D V
Sbjct: 5 ISNLLEKMTSSDKDFRFMATNDLMTE--LQKDSIKLDDDSERK-VVKMILKLLEDKNGEV 61
Query: 600 RICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL 659
+ + L + V +I + + + + + +S+ L+ + ++
Sbjct: 62 QNLAVKCLGPLVSKVKEYQVETIVDT---LCTNMLSD--KEQLRDISSIGLKTVIGELPP 116
Query: 660 SQLRKSIAEVVQELVMG-------PKQTPSIRRALLQDIGNLCSFFGQRQSNDF--LLPI 710
+ ++A V + + G ++ S++ L + ++ S G N +L
Sbjct: 117 ASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTC 176
Query: 711 LPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLA 770
L L +R + ++ G + + + + + + + + C+A
Sbjct: 177 LLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKNDSMSTTRTYIQCIA 236
Query: 771 ILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIR 830
+ + R LE I C R S + Y ++ +I
Sbjct: 237 AISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIIN 296
Query: 831 PFLR 834
L+
Sbjct: 297 ICLK 300
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.9 bits (107), Expect = 4e-05
Identities = 55/336 (16%), Positives = 107/336 (31%), Gaps = 28/336 (8%)
Query: 394 LLGDISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAFRKNG 453
+L L+ G + ++ M S + S S + + +++ A K G
Sbjct: 752 MLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEG 811
Query: 454 HPFLKKITMNNLSSLMSEYDSQSDTFGMPFL-PLPEDSMKCEGIVLIASLLCSCVRNVKL 512
+ + + +S ++ + + + S + E +I S V
Sbjct: 812 PAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEV-- 869
Query: 513 PHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNF 572
+ AA L S S+ E LP V+ ++ + L +L +I+
Sbjct: 870 ---KSAASYALGSISVGNLPE-----YLPFVLQEITS-QPKRQYLLLHSLKEIISSA--- 917
Query: 573 PPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDK 632
K + E I +L + EE R A + KL L L+ +
Sbjct: 918 SVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRL-------KGY 970
Query: 633 LSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQT-PSIRRALLQDI 691
L + S + + V + + + + + + + ++RR L
Sbjct: 971 LISGS---SYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTF 1027
Query: 692 GNLCSFFGQ--RQSNDFLLPILPAFLNDRDEQLRAV 725
+ R D +LP L R E +R V
Sbjct: 1028 NSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREV 1063
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.5 bits (164), Expect = 2e-12
Identities = 35/295 (11%), Positives = 83/295 (28%), Gaps = 47/295 (15%)
Query: 26 NLVLKEVLGGSRF-------FKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRET 78
L + LG F ++ V VK+ + L +
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS-- 81
Query: 79 FRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRDRL------------------STPP 119
+H ++ ++ +Y L + L
Sbjct: 82 -YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179
L L + ++Q+ + K H D+ N+L+T + DF +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLAR----DIK 196
Query: 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEV 238
+ S++ + + ++AP + + D+++ G + ELF L
Sbjct: 197 NDSNYVVKGNARLP-VKWMAP----------ESIFNCVYTFESDVWSYGIFLWELFSLGS 245
Query: 239 PFFELSHLLAYRRGQYDPSQHLEKIPD--SGIRKMILHMIQLEPELRFSAESYLQ 291
+ + + + + + ++ +P R + + +Q
Sbjct: 246 SPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.8 bits (156), Expect = 2e-11
Identities = 48/301 (15%), Positives = 81/301 (26%), Gaps = 37/301 (12%)
Query: 1104 SPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTV 1163
+ AD T + R R L + H + + + D VSAS D +
Sbjct: 24 ACADATLSQITNNIDPVGRIQMRTRRTL----RGHLAKIYAMHWGTDSRLLVSASQDGKL 79
Query: 1164 KVWDSRK----------------LEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1207
+WDS S L+ ++ + R V
Sbjct: 80 IIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTL------VNYNTDNCASHMF 1261
G S V + T V + + +F
Sbjct: 140 AGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 1262 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRF 1321
+ + LWD R T E ++++ P GN F +GS L+DLR
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTG--HESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
Query: 1322 LVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVL 1381
+ ++ + + F L+ ++W+A VL
Sbjct: 258 DQELMTYSHDNIICGITSVSFSKSGR---------LLLAGYDDFNCNVWDALKADRAGVL 308
Query: 1382 R 1382
Sbjct: 309 A 309
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 59.4 bits (142), Expect = 1e-09
Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 23/181 (12%)
Query: 1138 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR 1197
H V ++++ D FVS + D++ K+WD R+ R T H A+C
Sbjct: 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM----CRQTFTGHESDINAIC--FFP 236
Query: 1198 HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA 1257
+ G+ D +F + + +T V+++
Sbjct: 237 NGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG------------ITSVSFSKS--- 281
Query: 1258 SHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLW 1317
+ + + ++WD L + VS L G +GS L +W
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAGVLAG--HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 1318 D 1318
+
Sbjct: 340 N 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 47.8 bits (112), Expect = 7e-06
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1167
+ L H + V+ + ++ D + S DS +K+W+
Sbjct: 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.9 bits (107), Expect = 3e-05
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 6/82 (7%)
Query: 1134 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCT 1193
+ ++ S ++ DD VWD+ K ++ L H +R C
Sbjct: 265 SHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADR----AGVLAGH--DNRVSCL 318
Query: 1194 MMLRHSAQVVVGACDGIIHMFS 1215
+ V G+ D + +++
Sbjct: 319 GVTDDGMAVATGSWDSFLKIWN 340
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 64.9 bits (156), Expect = 3e-11
Identities = 42/357 (11%), Positives = 90/357 (25%), Gaps = 68/357 (19%)
Query: 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSR 1189
+ V L+EH V + + D + V+ D VW +
Sbjct: 42 VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK--------------- 86
Query: 1190 ALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLV 1249
T+++ + + ++ + +D + I + V
Sbjct: 87 --PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTV 144
Query: 1250 NYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP----------------EEGYV 1293
+ S + + + ++ P G+V
Sbjct: 145 LSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 204
Query: 1294 SSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTT 1353
+ G+ S + L D + + + + ++
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADK---KMAVATLASETLPLLAVTFITESS----- 256
Query: 1354 ARPLIYVAAGC-NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDL 1412
VAAG L+ ++ + D+P S R +
Sbjct: 257 -----LVAAGHDCFPVLFTYDSAAGKLSF--------GGRLDVPKQS---SQRGLTARER 300
Query: 1413 RRNVNQKYRVDELNEPPPRLLG-----IRSLLPLPGGD-----LLTGGTDLKIRRWD 1459
+N+++K + L + + L GG T G D + WD
Sbjct: 301 FQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 59.5 bits (142), Expect = 1e-09
Identities = 41/423 (9%), Positives = 99/423 (23%), Gaps = 70/423 (16%)
Query: 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC 1192
A+ ++ A + D + ++ V +++ L H +
Sbjct: 1 AYHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSG--NKWVQVHELKEHNGQVTGVD 58
Query: 1193 TMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYN 1252
S ++V D +++++ + V +
Sbjct: 59 WA--PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARC-------------VRW 103
Query: 1253 TDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRG 1312
N ++ I ++ ++ P V SL P +GS
Sbjct: 104 APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 163
Query: 1313 VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1372
++ + + + S++ + V N +
Sbjct: 164 KCRIFSAY----IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWV 219
Query: 1373 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL 1432
+ S + ++ +
Sbjct: 220 SHDSTVCLADADKKMAVATLASETLPLLAVT----------------------------- 250
Query: 1433 LGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQ 1492
+ L+ G D + + S G + S +
Sbjct: 251 -------FITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRL----------DVPKQSSQR 293
Query: 1493 VVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL---GSVKLNQRLLISSSRDGAI 1549
+ R+R K + AAA H++S+ + K ++ DG +
Sbjct: 294 GLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 353
Query: 1550 KVW 1552
+W
Sbjct: 354 SIW 356
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 42.2 bits (97), Expect = 4e-04
Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
Query: 1138 HCSAVNEIAISHDHSF----FVSASDDSTVKVWDSRKLEKDIS 1176
H ++V++I++ F + D + +WD R LE +
Sbjct: 324 HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALK 366
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.8 bits (154), Expect = 5e-11
Identities = 60/318 (18%), Positives = 110/318 (34%), Gaps = 47/318 (14%)
Query: 15 EYYLHDLPSSYNLVLK-----EVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLRE 67
++Y ++ S VLK + +G + V +K + +
Sbjct: 2 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP---FQNQT 58
Query: 68 YERRLFHIRETFRSIDHPH------VWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFL 121
+ +R + + ++H + V+ Q E + YL+ + +L +
Sbjct: 59 HAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMEL-- 116
Query: 122 SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181
+L +Q+L +K H GI H D+K N++V S L + DF +
Sbjct: 117 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----TAGTS 172
Query: 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241
+ + T Y APE K ++DI++VGC++ E+ F
Sbjct: 173 FMMTPYVVT----RYYRAPEVILGM----------GYKENVDIWSVGCIMGEMVRHKILF 218
Query: 242 ELSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTY 301
D K+ + M +L+P +R E+ + YA + FP
Sbjct: 219 P----------GRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK-YAGLTFPKL 267
Query: 302 FSPFLHNFYCCWNPLHSD 319
F L N L +
Sbjct: 268 FPDSLFPADSEHNKLKAS 285
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.8 bits (148), Expect = 2e-10
Identities = 48/356 (13%), Positives = 97/356 (27%), Gaps = 40/356 (11%)
Query: 1125 WR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE----------- 1172
WR L+ H V + + VS SDD+T+KVW + +
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 1173 -KDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYS 1230
R + R L + + + G+ +
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 1231 GISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290
+ DI+ + + + + + +WD + + TL+
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNR 179
Query: 1291 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAV 1350
Y G VSGS + +WD+ +++ Q N
Sbjct: 180 VYSLQ----FDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL----TSGMELKDN--- 228
Query: 1351 STTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKT 1410
++ + V +W+ + G C Q L+ N + + S+ T
Sbjct: 229 ------ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCL-QFNKNFVITSSDDGT 281
Query: 1411 DLRRNVNQKYRVDELNEPPPRLLG--IRSLLPLPGGDLLTGGT-----DLKIRRWD 1459
++ + L G + + + G+ + K+ D
Sbjct: 282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 60.2 bits (145), Expect = 6e-10
Identities = 44/311 (14%), Positives = 106/311 (34%), Gaps = 73/311 (23%)
Query: 26 NLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID 83
+ L LG ++ + + + V+VK+ + + ++ I+
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKI-------LKPVKKKKIKREIKILENLRG 88
Query: 84 HPHVWAFQ--FWQETDKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQC 140
P++ + L+ ++ N + T L+ + ++ +++L A+ C
Sbjct: 89 GPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYC 145
Query: 141 HEKGICHGDIKCENVLVTSWNW-LYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLA 199
H GI H D+K NV++ + L L D+ + F+ G + +A
Sbjct: 146 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWG--------------LAEFYHPGQEYNVRVA 191
Query: 200 PERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL-FLEVPFFE---------------- 242
F + S+D++++GC++A + F + PFF
Sbjct: 192 SRYFKGP---ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG 248
Query: 243 ----------------------LSHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEP 280
L R ++ S++ + + + +++ +
Sbjct: 249 TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD-FLDKLLRYDH 307
Query: 281 ELRFSAESYLQ 291
+ R +A ++
Sbjct: 308 QSRLTAREAME 318
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.6 bits (145), Expect = 1e-09
Identities = 42/373 (11%), Positives = 101/373 (27%), Gaps = 13/373 (3%)
Query: 245 HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSP 304
+ + + ++ + + + T P
Sbjct: 225 EACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVP 284
Query: 305 FLHNFYCCWNPLHSDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQER 364
N + + N I + +S +
Sbjct: 285 AFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQI---LPCIKELVSDANQHVK 341
Query: 365 VTKQNLNLAKALLEKREEMEKGRVQNRFRLLGDISTLIGDGKESNQCSNVKPMPEDVPNS 424
++ + + + ++ + + L D + SN + + +
Sbjct: 342 SALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQ 401
Query: 425 TFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEY--DSQSDTFGMP 482
+ + + ++ + +I + + L+SL + D
Sbjct: 402 SLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAA 461
Query: 483 FLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHY--RRAAILLLKSSSLFIDDEDRLQRVL 540
L + K A+++ + P+Y R + + S + + +L
Sbjct: 462 TSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHML 521
Query: 541 PHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVR 600
P V+ M DP A VR ++L I P++ D + P+L L D + V+
Sbjct: 522 PTVLRMAGDPVANVRFNVAKSLQKIGPIL------DNSTLQSEVKPILEKLTQDQDVDVK 575
Query: 601 ICYASNIAKLALT 613
+ L+L
Sbjct: 576 YFAQEALTVLSLA 588
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.0 bits (141), Expect = 3e-09
Identities = 57/320 (17%), Positives = 107/320 (33%), Gaps = 17/320 (5%)
Query: 513 PHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNF 572
R +I L + +L + E +LP + + D V A E L LV
Sbjct: 24 VQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDE-VLLALAEQLGTFTTLV--- 79
Query: 573 PPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDK 632
+ +LP L L E VR ++ ++ HS EA +
Sbjct: 80 ---GGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHE------HSPSDLEAHFVPL 130
Query: 633 LSAPHKSPSSSNETSV-QLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDI 691
+ ++ TS L + S ++ + + + L TP +RRA +
Sbjct: 131 VKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCS--DDTPMVRRAAASKL 188
Query: 692 GNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIE 751
G ++P+ +D + +R + V + + + +E ++P +
Sbjct: 189 GEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLR 248
Query: 752 QALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAA 811
QA D + V D L K+ + +++ L+ VR + +
Sbjct: 249 QAAEDKSWRVRYMVADKFTELQKAVG-PEITKTDLVPAFQNLMKDCEAEVRAAASHKVKE 307
Query: 812 SSESLGAVDSYVFLAPVIRP 831
E+L A + I P
Sbjct: 308 FCENLSADCRENVIMSQILP 327
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.5 bits (124), Expect = 3e-07
Identities = 26/191 (13%), Positives = 67/191 (35%), Gaps = 8/191 (4%)
Query: 652 RLNADVQLSQL------RKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSND 705
RLN+ +LS + ++ +E++ L + AL + +G + G +
Sbjct: 27 RLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVH 86
Query: 706 FLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNA 765
LLP L + + +R + + +E + +P +++ +A
Sbjct: 87 CLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSA 146
Query: 766 LDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGAVDSYVFL 825
++ + + E+ + L + VRR+ + + ++ L + +
Sbjct: 147 CGLFSVCYP--RVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEI 204
Query: 826 APVIRPFLRRQ 836
P+ +
Sbjct: 205 IPMFSNLASDE 215
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.5 bits (124), Expect = 3e-07
Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 3/125 (2%)
Query: 679 QTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVG 738
+IR A ++ L FG+ ++ ++P + A D + R I + G
Sbjct: 453 HVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCG 512
Query: 739 ERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAF-PLLCYP 797
+ +++LP + + D V N L + L L ++ L
Sbjct: 513 QDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGP--ILDNSTLQSEVKPILEKLTQDQ 570
Query: 798 SQWVR 802
V+
Sbjct: 571 DVDVK 575
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (99), Expect = 4e-04
Identities = 49/272 (18%), Positives = 98/272 (36%), Gaps = 16/272 (5%)
Query: 503 LCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETL 562
+ + H + A ++ S + ++ ++ +LP +A L D VR + L
Sbjct: 328 CIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNL 387
Query: 563 CDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLA--LTAYGFLVH 620
+ ++ S + +LP + L +D + VR+ + LA L F
Sbjct: 388 DCVNEVIGIRQLS------QSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEK 441
Query: 621 SIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQT 680
L A ++D + A ++ +S+ L++L +I V + P
Sbjct: 442 LNSLCMAWLVDHVYAIREAATSN------LKKLVEKFGKEWAHATIIPKVLAMSGDPN-- 493
Query: 681 PSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGER 740
R L I L GQ + +LP + D +R + + +
Sbjct: 494 YLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNS 553
Query: 741 SVEEYLLPYIEQALSDATEAVIVNALDCLAIL 772
+++ + P +E+ D V A + L +L
Sbjct: 554 TLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 588 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.7 bits (96), Expect = 7e-04
Identities = 43/184 (23%), Positives = 64/184 (34%), Gaps = 11/184 (5%)
Query: 703 SNDFLLPI--LPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEA 760
+D L PI L L + D QLR ++ + +G LLP++ + D E
Sbjct: 5 GDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDE- 63
Query: 761 VIVNALDCLAILCK--SGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGA 818
V++ + L G LL +E L VR V + A S
Sbjct: 64 VLLALAEQLGTFTTLVGGPEYVHCLLPPLES---LATVEETVVRDKAVESLRAISHEHSP 120
Query: 819 VDSYVFLAPVI-RPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENARS--SDMLERQ 875
D P++ R S S L S P VS V ++ + R+ SD
Sbjct: 121 SDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDTPMV 180
Query: 876 RKIW 879
R+
Sbjct: 181 RRAA 184
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 59.7 bits (143), Expect = 1e-09
Identities = 48/229 (20%), Positives = 76/229 (33%), Gaps = 28/229 (12%)
Query: 28 VLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYE----RRLFHI-RETFR 80
+L LG F L K + V +K+ Y + E E +R+
Sbjct: 16 ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKED 75
Query: 81 SIDHPHV----WAFQFWQETDKAAYLLRQYF--FNSLRDRLSTPPFLSLVEKKWLAFQLL 134
S+ H+ F ++ + + + L+ K ++ QLL
Sbjct: 76 SMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLL 135
Query: 135 LAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK 193
L + H + GI H DIK ENVL+ + + K + D +
Sbjct: 136 LGLDYMHRRCGIIHTDIKPENVLMEIVDS--PENLIQIKIADLGNACWYDEHYTNSIQ-- 191
Query: 194 RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 242
Y +PE V AP DI++ C+I EL FE
Sbjct: 192 TREYRSPE----------VLLGAPWGCGADIWSTACLIFELITGDFLFE 230
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 56.9 bits (135), Expect = 5e-09
Identities = 28/332 (8%), Positives = 77/332 (23%), Gaps = 38/332 (11%)
Query: 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGS 1188
G + H A+ ++ S D SA + + WD +
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD-----------------ISTG 44
Query: 1189 RALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTL 1248
+ H+ + +F V + + + + +
Sbjct: 45 ISNRVFPDVHATMITGIKTTSKGDLF----------TVSWDDHLKVVPAGGSGVDSSKAV 94
Query: 1249 VNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSG 1308
N + + + + L +P S + +
Sbjct: 95 ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVA-- 152
Query: 1309 SSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368
+ K + + + + +V
Sbjct: 153 --------VGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVI 204
Query: 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPS-SRSNPKTDLRRNVNQKYRVDELNE 1427
++ N + + + S + + N+N+ + +
Sbjct: 205 PYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIK 264
Query: 1428 PPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWD 1459
+ + S++ L +++ G D I+ W+
Sbjct: 265 GAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 43.4 bits (100), Expect = 1e-04
Identities = 7/72 (9%), Positives = 21/72 (29%)
Query: 1250 NYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGS 1309
+ + + + + + +W+ S+ + + V VS
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG 287
Query: 1310 SRGVLTLWDLRF 1321
+ W++ F
Sbjct: 288 QDSNIKFWNVPF 299
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 40.7 bits (93), Expect = 9e-04
Identities = 10/42 (23%), Positives = 17/42 (40%)
Query: 1126 RPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1167
+P + H + I + + VSA DS +K W+
Sbjct: 255 KPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 876 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.2 bits (139), Expect = 6e-09
Identities = 43/319 (13%), Positives = 94/319 (29%), Gaps = 47/319 (14%)
Query: 427 SQDLRNSSVESSGELLQSISDAFRKNGHPFLKKI---TMNNLSSLMSEYDSQSD-----T 478
S R + L ++ + RK H +I M +L +
Sbjct: 570 STSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDAL 629
Query: 479 FGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLK--SSSLFIDDEDRL 536
+ L + + L ++N AA+ L+ +L +
Sbjct: 630 MAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFC 689
Query: 537 QRVLPHVIAMLSDPAAI--VRCAALETLCDILPLVRNFPPSDAKIFPEYILPML---SML 591
V+ ++ L + V+ L DI + + K + E +L L S
Sbjct: 690 DEVMQLLLENLGNENVHRSVKPQILSVFGDIALAI----GGEFKKYLEVVLNTLQQASQA 745
Query: 592 PDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQ 651
D + + Y + + + L AY +V ++ + V +
Sbjct: 746 QVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVML---------------- 789
Query: 652 RLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQR-----QSNDF 706
+ + I + + T + IG+LC+ FG+ ++
Sbjct: 790 -------VQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPM 842
Query: 707 LLPILPAFLNDRDEQLRAV 725
+ +L + + + +
Sbjct: 843 IHELLTEGRRSKTNKAKTL 861
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 56.3 bits (134), Expect = 1e-08
Identities = 35/330 (10%), Positives = 88/330 (26%), Gaps = 27/330 (8%)
Query: 1145 IAISHDHSFFVSASDDSTVKVWD--SRKLEKDISFRSR-----LTYHLEGSRALCTMMLR 1197
A+ H + + + + + V D S + K + + A
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 1198 HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA 1257
+ ++ + +G IS K+ V T
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKE-------VYATVNPTQ--- 111
Query: 1258 SHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLW 1317
Y + + ++ T ++ P V + G+ +V+G + +
Sbjct: 112 RLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVK 171
Query: 1318 DLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSC 1377
++ V + +++ L+ P + + ++ A+
Sbjct: 172 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 231
Query: 1378 HQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL---- 1433
+ + G T + + D + R+ + + +L+
Sbjct: 232 YLSVDLKT--GKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAAN 289
Query: 1434 ---GIRSLLPLPGGDLL-TGGTDLKIRRWD 1459
+ GD L GGT + ++
Sbjct: 290 LDHTYYCVAFDKKGDKLYLGGTFNDLAVFN 319
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 41.6 bits (96), Expect = 6e-04
Identities = 18/302 (5%), Positives = 63/302 (20%), Gaps = 62/302 (20%)
Query: 1137 EHCSAVNEIAISHDHSF-FVSASDDSTVKVWD--SRKLEKDISFRSRLTYHLEGSRALCT 1193
++ D+ +V + + D + K + S +
Sbjct: 37 PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI 96
Query: 1194 MMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVN--- 1250
V + + V + + ++ +
Sbjct: 97 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156
Query: 1251 --YNTDNCASHMFMYSTQ-----------------NCGIHLWDTRSNSNTWTLKAIPEEG 1291
Y M + + + ++ W +S + ++
Sbjct: 157 SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFS-------M 209
Query: 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDL-------RFLVPVNSWQYSQVCPIEKMCLFVP 1344
+ + DL + + ++ + +
Sbjct: 210 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG 269
Query: 1345 PPN-------------AAVSTTARP----------LIYVAAGCNEVSLWNAENGSCHQVL 1381
N A + +Y+ N+++++N + + +
Sbjct: 270 VLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329
Query: 1382 RT 1383
+
Sbjct: 330 KL 331
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.7 bits (127), Expect = 6e-08
Identities = 39/268 (14%), Positives = 73/268 (27%), Gaps = 35/268 (13%)
Query: 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFR--------SRLTY 1183
+ E V + +D VS D+T+K+WD LE +
Sbjct: 8 IHCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
Query: 1184 HLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEG 1243
+ + + + + I H +V H+ G + S I D
Sbjct: 66 RVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASP 125
Query: 1244 AIVTLVNYNTDNCASHMFMYS--------TQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1295
+TL + A+ + + + I +W+T + TL
Sbjct: 126 TDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQ 185
Query: 1296 LVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR 1355
VSGSS + LWD+ + + +
Sbjct: 186 ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDN------------- 228
Query: 1356 PLIYVAAGCNEVSLWNAENGSCHQVLRT 1383
I A ++ +W+ +
Sbjct: 229 KRIVSGAYDGKIKVWDLVAALDPRAPAG 256
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (117), Expect = 1e-06
Identities = 39/210 (18%), Positives = 62/210 (29%), Gaps = 38/210 (18%)
Query: 1116 RTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI 1175
R+ ++ D L L H +AVN + D + VSAS D T+KVW++ E
Sbjct: 115 RSIAVWDMASPTDITLRRVLVGHRAAVNVV--DFDDKYIVSASGDRTIKVWNTSTCE--- 169
Query: 1176 SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDI 1235
L G + + VV G+ D I ++ DI
Sbjct: 170 -----FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLW-------------------DI 205
Query: 1236 KKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE------ 1289
+ + + + I +WD + +
Sbjct: 206 ECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE 265
Query: 1290 -EGYVSSLVTGPCGNWFVSGSSRGVLTLWD 1318
G V L VS S + +WD
Sbjct: 266 HSGRVFRLQ--FDEFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.7 bits (101), Expect = 1e-04
Identities = 38/280 (13%), Positives = 75/280 (26%), Gaps = 37/280 (13%)
Query: 1300 PCGNWFVSGSSRGVLTLWDLRFL----------VPVNSWQYSQVCPIEKMCLFVPPPNAA 1349
VSG + +WD L V QY + I
Sbjct: 23 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDV 82
Query: 1350 VS-----------------TTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEM 1392
+ ++ + +++W+ + + + R
Sbjct: 83 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 142
Query: 1393 SDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTD 1452
+ S S +T N + V LN + + +++G +D
Sbjct: 143 VV-DFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACL----QYRDRLVVSGSSD 197
Query: 1453 LKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVL 1512
IR WD + G + S + K L + L +A
Sbjct: 198 NTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYD--GKIKVWDLVAALDPRAPA 255
Query: 1513 AAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552
+ H + ++ ++ ++SSS D I +W
Sbjct: 256 GTLCLRTLVEHSGRVFR---LQFDEFQIVSSSHDDTILIW 292
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.3 bits (126), Expect = 1e-07
Identities = 24/218 (11%), Positives = 60/218 (27%), Gaps = 10/218 (4%)
Query: 1107 DLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVW 1166
+ ++ S V + IS + ++ TV++
Sbjct: 152 KFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER-GLIATGFNNGTVQIS 210
Query: 1167 DSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNV 1226
+ L +F S+ + + + + + ++ +
Sbjct: 211 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET-EFGERI 269
Query: 1227 EKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286
S + + E A + V + N + + + + WD ++ TL
Sbjct: 270 GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNM 329
Query: 1287 IPE--EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL 1322
+ E L G+ ++D++FL
Sbjct: 330 HCDDIEIEEDILAVDEHGDSLAEPG------VFDVKFL 361
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.7 bits (114), Expect = 3e-06
Identities = 27/229 (11%), Positives = 71/229 (31%), Gaps = 28/229 (12%)
Query: 1135 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTM 1194
+ H + + ++ + F VS S D +KVWD++ L+ + ++ + S
Sbjct: 10 GKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 1195 MLRHSAQ-------VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVT 1247
+L+ + V + G + + + + + + K
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRIT--REDETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 1248 LVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWT----------------LKAIPEEG 1291
+ D SH + + ++W ++ +
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185
Query: 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1340
+ +S+ G +G + G + + +L L P+ +++
Sbjct: 186 FATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 233
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (103), Expect = 7e-05
Identities = 23/208 (11%), Positives = 56/208 (26%), Gaps = 19/208 (9%)
Query: 1132 VAHLQEHCSAVNEIAISHD-----HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLE 1186
+ + + V+ T +W + + +
Sbjct: 112 LLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTL 171
Query: 1187 GSRALCTMMLRHSAQV-----------VVGACDGIIHMFSVDHISRGLGNVEKYSGISDI 1235
+ + S G +G + + + + ++S I++
Sbjct: 172 ELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNS 231
Query: 1236 KKKDTKEGAIVTLVNYNT--DNCASHMFMYSTQNC-GIHLWDTRSNSNTWTLKAIPEEGY 1292
+ + + + N + +Y T+ I ++S+ +L +
Sbjct: 232 NSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 291
Query: 1293 VSSLVTGPCGNWFVSGSSRGVLTLWDLR 1320
V SL G S G L WD++
Sbjct: 292 VMSLSFNDSGETLCSAGWDGKLRFWDVK 319
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.8 bits (96), Expect = 5e-04
Identities = 24/253 (9%), Positives = 60/253 (23%), Gaps = 18/253 (7%)
Query: 1148 SHDHSFFVSASDDSTVKVWDSRKLEKDISFRS------RLTYHLEGSRALC---TMMLRH 1198
+ + + S + + + ++ AL +
Sbjct: 76 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 135
Query: 1199 SAQVVVGACDGIIHMFSV----DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTD 1254
S ++V G +++ D + N + + T V+ +
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 195
Query: 1255 NCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRG-- 1312
+ F T + I + S+ P G+
Sbjct: 196 GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255
Query: 1313 -VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVP--PPNAAVSTTARPLIYVAAGCNEVSL 1369
+TL++ F + S + F + + + A ++
Sbjct: 256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 315
Query: 1370 WNAENGSCHQVLR 1382
W+ + L
Sbjct: 316 WDVKTKERITTLN 328
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.6 bits (93), Expect = 0.001
Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 4/95 (4%)
Query: 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA 1349
+ + S+ C ++ VS S G L +WD + L N S + K L A
Sbjct: 14 DADIFSVS--ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA 71
Query: 1350 VSTTARPLIYVAAGC--NEVSLWNAENGSCHQVLR 1382
+ A L VA ++ + + +
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITREDETKKVI 106
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.9 bits (125), Expect = 2e-07
Identities = 22/255 (8%), Positives = 59/255 (23%), Gaps = 29/255 (11%)
Query: 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRA 1190
+V Q +++I I S + S D ++ V+ K++ L Y
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRY---KHPL 59
Query: 1191 LCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVN 1250
LC + ++ + + L
Sbjct: 60 LCCNFIDNTDLQIYVGTVQGEILKVDLI---------------GSPSFQALTNNEANLGI 104
Query: 1251 YNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS----SLVTGPCGNWFV 1306
+ ++ + I + D R+ + + +
Sbjct: 105 CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLI 164
Query: 1307 SGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366
G + + + L N + + + P + ++
Sbjct: 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE-------QEGYACSSIDGR 217
Query: 1367 VSLWNAENGSCHQVL 1381
V++ ++
Sbjct: 218 VAVEFFDDQGDDYNS 232
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 49.4 bits (117), Expect = 5e-07
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 15/135 (11%)
Query: 53 VKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFNSLR 112
VK GD R + + + V W+ +L +
Sbjct: 42 VKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEGN----AVLMELIDAKEL 97
Query: 113 DRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172
R+ +++ +L V + + +GI HGD+ NVLV+ +++ DF
Sbjct: 98 YRVRVENPDEVLD------MILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDF---- 146
Query: 173 PTYIPYDDPSDFSFF 187
P + +
Sbjct: 147 PQSVEVGEEGWREIL 161
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 50.2 bits (118), Expect = 1e-06
Identities = 24/204 (11%), Positives = 50/204 (24%), Gaps = 18/204 (8%)
Query: 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRAL 1191
E + +A + D S D V ++ L +D +S
Sbjct: 127 RRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAE-------- 178
Query: 1192 CTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNY 1251
A G++ + + + + D + G +
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDI-DPADPTAYRTGLLTMDLETGEMAMREVR 237
Query: 1252 NTDNCASHMFMYSTQN------CGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWF 1305
D + + + +D N++ +P S+ G+
Sbjct: 238 IMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNASIKR---VPLPHSYYSVNVSTDGSTV 294
Query: 1306 VSGSSRGVLTLWDLRFLVPVNSWQ 1329
G + G L +D L
Sbjct: 295 WLGGALGDLAAYDAETLEKKGQVD 318
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.9 bits (94), Expect = 8e-04
Identities = 19/302 (6%), Positives = 65/302 (21%), Gaps = 47/302 (15%)
Query: 1135 LQEHCSAVNEIAISHDHSF-FVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCT 1193
+ + ++ + + + ++ D + + T
Sbjct: 29 IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-ETLGRIDLSTPEERVKSLFGA 87
Query: 1194 MMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVT------ 1247
+ + + + + + + + + + ++ ++
Sbjct: 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGS 147
Query: 1248 -LVNYNTDNCASHMF------MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGP 1300
L D Q+ + W
Sbjct: 148 KLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARK 207
Query: 1301 CGNWFVSGSSRGVLTLWDL-------RFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTT 1353
+ + R L DL R + ++ + +S K F
Sbjct: 208 DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDL 267
Query: 1354 ARP----------------------LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTE 1391
+ +++ +++ ++AE + + G+
Sbjct: 268 EKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL---EKKGQVDLPGNAS 324
Query: 1392 MS 1393
MS
Sbjct: 325 MS 326
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 39.8 bits (91), Expect = 0.002
Identities = 10/72 (13%), Positives = 23/72 (31%), Gaps = 4/72 (5%)
Query: 1125 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYH 1184
+ + + +S D S + +D+ LEK + ++
Sbjct: 265 FDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK----KGQVDLP 320
Query: 1185 LEGSRALCTMML 1196
S +L ++ L
Sbjct: 321 GNASMSLASVRL 332
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.0 bits (115), Expect = 2e-06
Identities = 34/312 (10%), Positives = 79/312 (25%), Gaps = 20/312 (6%)
Query: 1086 MGTSGTAKGSSINVEDASSPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEI 1145
G G+ S +V + P + IP + + H V +
Sbjct: 4 QGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQ------INTLNHGEVVCAV 57
Query: 1146 AISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVG 1205
IS+ + VKVWD + S S+L + +L ++VG
Sbjct: 58 TISNPTRHVYTGGKG-CVKVWDISH-PGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG 115
Query: 1206 ACDGIIHMFSVDHISRGLGNVEKYSGIS----DIKKKDTKEGAIVTLVNYNTDNCASHMF 1261
+ ++ + + + S + I + + N + +
Sbjct: 116 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTL 175
Query: 1262 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTL----- 1316
+ Q +++ L + V S + + +L
Sbjct: 176 VRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235
Query: 1317 ---WDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1373
+ + ++ L + N ++ W
Sbjct: 236 GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295
Query: 1374 NGSCHQVLRTAN 1385
G+ + ++
Sbjct: 296 YGASIFQSKESS 307
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 7e-05
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 1134 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCT 1193
L H S V + ++ +FVS D+ + W + + E S L
Sbjct: 260 QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-------ESSSVLSC 312
Query: 1194 MMLRHSAQVVVGACDGIIHMFSV 1216
+ +V G+ D ++ V
Sbjct: 313 DISVDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 8e-05
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 1125 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD 1167
WR + S+V IS D + V+ S D V++
Sbjct: 292 WRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.6 bits (101), Expect = 1e-04
Identities = 11/64 (17%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 1258 SHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLW 1317
F+ + ++ ++ W T ++ + K E V S + V+GS T++
Sbjct: 277 GKWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYIVTGSGDKKATVY 333
Query: 1318 DLRF 1321
++ +
Sbjct: 334 EVIY 337
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.9 bits (109), Expect = 1e-05
Identities = 37/331 (11%), Positives = 83/331 (25%), Gaps = 52/331 (15%)
Query: 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRA 1190
++ + H + + ++ +S S D + W S + +D S + +
Sbjct: 5 VLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEY 60
Query: 1191 LCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVN 1250
+ + + G V I + T + +N
Sbjct: 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLN 120
Query: 1251 YNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI--PEEGYVSSLVTGPCGNWFVSG 1308
+ + + S+ + P S + P + +G
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180
Query: 1309 SSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368
G + L+DL+ S + I + A L+ + +
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240
Query: 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEP 1428
+++ + A+ D
Sbjct: 241 IYSVKRPMKIIKALNAHKD----------------------------------------- 259
Query: 1429 PPRLLGIRSLLPLPGGDLLTGGTDLKIRRWD 1459
G+ +LL L++ G D I+RW+
Sbjct: 260 -----GVNNLLWETPSTLVSSGADACIKRWN 285
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (110), Expect = 1e-05
Identities = 45/386 (11%), Positives = 114/386 (29%), Gaps = 50/386 (12%)
Query: 430 LRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTFG--------- 480
++NS ++ + +++ L +L +E S
Sbjct: 60 IKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAE 119
Query: 481 MPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVL 540
+P PE + + + + + AI + +D+ +L
Sbjct: 120 IPVNQWPELIPQLV------ANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEIL 173
Query: 541 PHVIAML--SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEES 598
+I + +P+ V+ AA L + L + D + +I+ ++ P+
Sbjct: 174 TAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANF--DKESERHFIMQVVCEATQCPDTR 231
Query: 599 VRICYASNIAKLALTAYGFLVH-------------------SIRLSEAGVLDKLSAPHKS 639
VR+ N+ K+ Y ++ + L +
Sbjct: 232 VRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMD 291
Query: 640 PSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELV--------MGPKQTPSIRRALLQDI 691
+ + + R + ++ +V L + +A +
Sbjct: 292 LAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCL 351
Query: 692 GNLCSFFGQRQSNDFLLPILPAFLNDRDEQLR---AVFYGQIVYVCFFVGERSVEEYLLP 748
L + +LP + + + D + R + +G I+ + + +P
Sbjct: 352 MLLATCCED-DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMP 410
Query: 749 YIEQALSDATEAVIVNALDCLAILCK 774
+ + + D + V A + +C+
Sbjct: 411 TLIELMKDPSVVVRDTAAWTVGRICE 436
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (102), Expect = 1e-04
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 18/171 (10%)
Query: 430 LRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPED 489
+ S G + S + K +L I L+ D
Sbjct: 294 IEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLML 353
Query: 490 SMKCEG---IVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDE---DRLQRVLPHV 543
C + + + ++N YR AA++ + + + +P +
Sbjct: 354 LATCCEDDIVPHVLPFIKEHIKNPD-WRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTL 412
Query: 544 IAMLSDPAAIVRCAALETL---CDILPLVRNFPPSDAKIFPEYILPMLSML 591
I ++ DP+ +VR A T+ C++LP +A I Y+ P+L L
Sbjct: 413 IELMKDPSVVVRDTAAWTVGRICELLP--------EAAINDVYLAPLLQCL 455
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 46.0 bits (107), Expect = 3e-05
Identities = 17/198 (8%), Positives = 47/198 (23%), Gaps = 21/198 (10%)
Query: 1125 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSR---L 1181
+ G + S A D S S D L S+ +
Sbjct: 164 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 223
Query: 1182 TYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTK 1241
+ +++ + + S ++ G + +
Sbjct: 224 PLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPG--DYRMIIPLESS------ 275
Query: 1242 EGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPC 1301
+ + + + + + + + +D + T K + ++ L
Sbjct: 276 ----ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVK------TRKVTEVKNNLTDLRLSAD 325
Query: 1302 GNWFVSGSSRGVLTLWDL 1319
+ G + + L
Sbjct: 326 RKTVMVRKDDGKIYTFPL 343
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 45.2 bits (105), Expect = 4e-05
Identities = 25/327 (7%), Positives = 63/327 (19%), Gaps = 30/327 (9%)
Query: 1138 HCSAVNEIAISHDHSFFVSASDDS--TVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMM 1195
+ + D + ++D +A
Sbjct: 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD-----------------YRTGKAEKFEE 83
Query: 1196 LRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDN 1255
+ + +G + + D ++E + ++ N
Sbjct: 84 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIA 143
Query: 1256 CASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLT 1315
+ T + A E + + S R +
Sbjct: 144 YGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDP 203
Query: 1316 LWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG 1375
D V ++ + V + L PN +
Sbjct: 204 SPDRV----VLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL----NDMYKR 255
Query: 1376 SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL-- 1433
S + +Y + ++ P ++ +
Sbjct: 256 SSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVKN 315
Query: 1434 GIRSLLPLPGGD-LLTGGTDLKIRRWD 1459
+ L ++ D KI +
Sbjct: 316 NLTDLRLSADRKTVMVRKDDGKIYTFP 342
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 39.8 bits (91), Expect = 0.002
Identities = 6/36 (16%), Positives = 15/36 (41%)
Query: 1135 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRK 1170
+ E + + ++ +S D + DD + + K
Sbjct: 310 VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEK 345
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.3 bits (105), Expect = 4e-05
Identities = 38/328 (11%), Positives = 94/328 (28%), Gaps = 29/328 (8%)
Query: 1135 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTM 1194
L+ H ++V + + ++ ++ +DD ++V+DS + F +L+ H G AL
Sbjct: 8 LRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKK----FLLQLSGHDGGVWALK-- 60
Query: 1195 MLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTD 1254
H +V G+ D + ++ + S + +
Sbjct: 61 -YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRC---------------LDIVE 104
Query: 1255 NCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVL 1314
+ +++ +H+W S ++ EE + P N + G RG +
Sbjct: 105 YKNIKYIVTGSRDNTLHVWKLPKES---SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 161
Query: 1315 TLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAEN 1374
S + + +S + +A
Sbjct: 162 ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM 221
Query: 1375 GS--CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRL 1432
+ L + R S + ++ D +
Sbjct: 222 DTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHH 281
Query: 1433 LGIRSLLPL-PGGDLLTGGTDLKIRRWD 1459
+ ++ ++L G++ + ++
Sbjct: 282 TNLSAITTFYVSDNILVSGSENQFNIYN 309
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 861 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.8 bits (104), Expect = 9e-05
Identities = 33/299 (11%), Positives = 83/299 (27%), Gaps = 50/299 (16%)
Query: 442 LQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSDTFGMPFLPLPEDSMKCEGIVLIAS 501
L ++ + P + L + + + + S+ + +
Sbjct: 580 LAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLET 639
Query: 502 L--LCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDR--LQRVLPHVIAMLSDPAAI--VR 555
N A+ + S ++++ R ++ + M+S+P A ++
Sbjct: 640 FSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELK 699
Query: 556 CAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVR--ICYASNIAKLALT 613
A L DI N + + ++ PE + Y + + L
Sbjct: 700 PAVLSVFGDI---ASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLD 756
Query: 614 AYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQEL 673
AY +V + + L +I + + ++
Sbjct: 757 AYVGIVAGLH------------------------------DKPEALFPYVGTIFQFIAQV 786
Query: 674 VMGPK--QTPSIRRALLQDIGNLCSFFGQRQSNDFLL-PILPAFL------NDRDEQLR 723
P+ + RA + IG++ + F F + ++ + +
Sbjct: 787 AEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTRSGQLFSQATK 845
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 44.1 bits (102), Expect = 9e-05
Identities = 28/274 (10%), Positives = 62/274 (22%), Gaps = 39/274 (14%)
Query: 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWD--------------------S 1168
EH S + S V++WD
Sbjct: 48 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKD 107
Query: 1169 RKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEK 1228
+ + + + E + S + G + + + +
Sbjct: 108 ISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSD 167
Query: 1229 YSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1288
+ ++ + K + + + + G N T +
Sbjct: 168 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 227
Query: 1289 ---------EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKM 1339
G V L P G S S+ + +W++ L + IE
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGT--RIEDQ 285
Query: 1340 CLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1373
L + + + + ++ N E
Sbjct: 286 QLGIIW--------TKQALVSISANGFINFVNPE 311
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.8 bits (96), Expect = 5e-04
Identities = 11/71 (15%), Positives = 22/71 (30%), Gaps = 1/71 (1%)
Query: 1250 NYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL-VTGPCGNWFVSG 1308
+ S F + I +WD ++ ++ + V +S
Sbjct: 255 IFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISL 314
Query: 1309 SSRGVLTLWDL 1319
S G L ++L
Sbjct: 315 SLDGTLNFYEL 325
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.9 bits (94), Expect = 0.001
Identities = 25/285 (8%), Positives = 63/285 (22%), Gaps = 26/285 (9%)
Query: 1047 LVSGSFSISNGSKQFYRVVHEPEGRENDQMASVNCKFPEMGTSGTAKGSSINVEDASSPA 1106
+ + + V + A + GT + D +
Sbjct: 62 AHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLL 121
Query: 1107 DLTGLPSFVRTSSIPDSGWRPRGILVAH--LQEHCSAVNEIAISHDHSFFVSASDDSTVK 1164
P+ + R + V + D S A
Sbjct: 122 FYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 181
Query: 1165 VWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLG 1224
++ + + ++V G IH +D S
Sbjct: 182 EITHTEVFHPEDEFLINHP----------AYSQKAGRLVWPTYTGKIHQ--IDLSSGDAK 229
Query: 1225 NVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMY-------STQNCGIHLWDTRS 1277
+ +++ ++ D V Y+ ++ + T + + + D ++
Sbjct: 230 FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKT 289
Query: 1278 NSNTWTLKAIPEEGYVSSLVTGPCGNW--FVSGSSRGVLTLWDLR 1320
+ S+ + + L + D
Sbjct: 290 GERLAK---FEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 40.2 bits (92), Expect = 0.001
Identities = 29/276 (10%), Positives = 73/276 (26%), Gaps = 28/276 (10%)
Query: 1140 SAVNEIAISHDHSF-FVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1198
S IS D + +V+ + + V + D+ + + + +
Sbjct: 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVT 91
Query: 1199 SAQV------------VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIV 1246
+ V G + G +G + +T A++
Sbjct: 92 NMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151
Query: 1247 -TLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWF 1305
T+ + + + + S +T T I ++
Sbjct: 152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEG 211
Query: 1306 VSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365
V ++ ++ + + + P+ P AV+ + + + CN
Sbjct: 212 TKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-----PAGIAVTPDGKKVYVALSFCN 266
Query: 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFAR 1401
VS+ + + + P+A +
Sbjct: 267 TVSVIDTATNTITATMAVGKN---------PYASGQ 293
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1553 | |||
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.98 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.98 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.98 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.97 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.97 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.96 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.95 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.95 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.93 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.93 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.93 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.92 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.92 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.9 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.9 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.88 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.85 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.83 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.82 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.82 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.81 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.8 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.79 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.73 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.73 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.71 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.7 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.67 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.63 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.62 | |
| d1b3ua_ | 588 | Constant regulatory domain of protein phosphatase | 99.61 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.6 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.5 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.35 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.25 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.18 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.08 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.02 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.85 | |
| d1ibrb_ | 458 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.8 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 98.8 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 98.71 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.64 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.58 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 98.55 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.54 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 98.5 | |
| d1u6gc_ | 1207 | Cullin-associated NEDD8-dissociated protein 1 (Tip | 98.48 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 98.44 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 98.42 | |
| d2vglb_ | 579 | Adaptin beta subunit N-terminal fragment {Human (H | 98.37 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 98.37 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.26 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 98.23 | |
| d2bpta1 | 861 | Importin beta {Baker's yeast (Saccharomyces cerevi | 98.19 | |
| d1qbkb_ | 888 | Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 | 98.19 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.14 | |
| d1qgra_ | 876 | Importin beta {Human (Homo sapiens) [TaxId: 9606]} | 98.07 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 98.05 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 97.96 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.94 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 97.9 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 97.9 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.85 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 97.78 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 97.75 | |
| d1wa5b_ | 503 | Karyopherin alpha {Baker's yeast (Saccharomyces ce | 97.75 | |
| d1q1sc_ | 434 | Importin alpha {Mouse (Mus musculus) [TaxId: 10090 | 97.72 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 97.54 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 97.49 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 97.45 | |
| d1lrva_ | 233 | Leucine-rich repeat variant {Azotobacter vinelandi | 97.4 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 97.36 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 97.22 | |
| d2vgla_ | 584 | Adaptin alpha C subunit N-terminal fragment {Mouse | 97.13 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 96.87 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 96.79 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 96.71 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.61 | |
| d1oyza_ | 276 | Hypothetical protein YibA {Escherichia coli [TaxId | 96.47 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 96.35 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.06 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 95.93 | |
| d1jdha_ | 529 | beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | 95.63 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 95.36 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 95.29 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.12 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 94.95 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 94.46 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 93.77 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 93.45 | |
| d1wa5c_ | 959 | Exportin Cse1p {Baker's yeast (Saccharomyces cerev | 93.14 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 93.07 | |
| d1te4a_ | 111 | MTH187 {Archaeon Methanobacterium thermoautotrophi | 92.79 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 91.62 | |
| d1xqra1 | 264 | Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi | 88.77 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 88.4 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 87.78 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 83.44 |
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=365.17 Aligned_cols=247 Identities=21% Similarity=0.254 Sum_probs=208.2
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. .......+.+.+|.++++.++||||++++++++++...|+|
T Consensus 7 dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv 84 (263)
T d2j4za1 7 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 84 (263)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHH--CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
T ss_conf 7699889851778589999998999499999981688--56768999999999999856888888599999989998999
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
||||+ |+|.+++...+.+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||.++.....
T Consensus 85 mEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~----- 159 (263)
T d2j4za1 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS----- 159 (263)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-----
T ss_pred EEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCEEECCCCEEEECCCC-----
T ss_conf 850479858988750489999999999999999999999889465220234414668998711555633544888-----
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799998268899987899
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
......||+.|+|||++. +..++.++||||+||++|||++|.+||..................++.
T Consensus 160 ----~~~~~~Gt~~Y~APE~~~----------~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~ 225 (263)
T d2j4za1 160 ----RRTTLCGTLDYLPPEMIE----------GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 225 (263)
T ss_dssp ----CCEETTEEGGGCCHHHHT----------TCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT
T ss_pred ----CCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf ----523557887634999975----------899893144046759999983299998889999999999718999986
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 9998799999981001848899999999852
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 263 i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 293 (1553)
..++.+++||.+||+.||++|||++|+|+|.
T Consensus 226 ~~s~~~~~li~~~L~~dp~~R~t~~eil~hp 256 (263)
T d2j4za1 226 FVTEGARDLISRLLKHNPSQRPMLREVLEHP 256 (263)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHTCH
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHHCCC
T ss_conf 6899999999997647976890999997190
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=364.01 Aligned_cols=248 Identities=19% Similarity=0.190 Sum_probs=203.1
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. .....+.+.+|.++++.++||||+++++++++++..|+|
T Consensus 6 dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~----~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~iv 81 (271)
T d1nvra_ 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----AVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 81 (271)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-----------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHH----CCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEE
T ss_conf 6089989721748099999999999799999984566----412799999999999857998884696540467436798
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
|||++ |+|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 82 mEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~---- 157 (271)
T d1nvra_ 82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN---- 157 (271)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETT----
T ss_pred EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCC----
T ss_conf 8645898089997537999999999999999999999997598357546899788789987983231422404688----
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH----HHHHHHCCCCCCC
Q ss_conf 961222048987323684100126886322357999984247999999999980999998337----9999826889998
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~----~~~~~~~~~~~~~ 258 (1553)
......+..||+.|+|||.+... ..++.++||||+||++|||++|.+||.... .............
T Consensus 158 -~~~~~~~~~GT~~Y~APE~~~~~---------~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~ 227 (271)
T d1nvra_ 158 -RERLLNKMCGTLPYVAPELLKRR---------EFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 227 (271)
T ss_dssp -EECCBCCCCSCGGGSCTHHHHCS---------SBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTST
T ss_pred -CCCCCCCEEECCCCCCHHHHCCC---------CCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf -65311132557474287286189---------99997101617379999998299788889859999999863888788
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 7899999879999998100184889999999985
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.. ...++.+++||.+||+.||++|||++|+|+|
T Consensus 228 ~~-~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 260 (271)
T d1nvra_ 228 PW-KKIDSAPLALLHKILVENPSARITIPDIKKD 260 (271)
T ss_dssp TG-GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC-CCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 64-4699999999999767996689099999619
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=359.22 Aligned_cols=245 Identities=27% Similarity=0.337 Sum_probs=206.4
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
.|++.+.||+|+||+||+|++.. ..||+|++.+... ......+.+|..+++.++||||+++++++++++..|+|
T Consensus 10 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv 85 (307)
T d1a06a_ 10 IYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL----EGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLI 85 (307)
T ss_dssp TEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC--------------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHHH----HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 66998899406583999999999998999999815773----12899999999999867998999198999989988898
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEC---CCCEEEEECCCCCCCCCCCC
Q ss_conf 03535-998888609999999999999999999999999889852578899689913---99299941376321268899
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS---WNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~---~~~vkL~DFg~~k~~~~~~~ 179 (1553)
||||+ |+|.+++..++.+++.+++.|+.||+.||+|||++||+||||||+|||++. ++.+||+|||+++....
T Consensus 86 mE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~--- 162 (307)
T d1a06a_ 86 MQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP--- 162 (307)
T ss_dssp ECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-----------
T ss_pred EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCEEEEECCCEEEECCC---
T ss_conf 85268984888653036788789999999999998752413055687046300110468882499831543587258---
Q ss_pred CCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH----HHHHCCCC
Q ss_conf 99996122204898732368410012688632235799998424799999999998099999833799----99826889
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYD 255 (1553)
Q Consensus 180 ~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~----~~~~~~~~ 255 (1553)
.....+..||+.|+|||.+. ...|++++||||+||++|||++|.+||...... .+.++.+.
T Consensus 163 -----~~~~~~~~GT~~y~APE~~~----------~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~ 227 (307)
T d1a06a_ 163 -----GSVLSTACGTPGYVAPEVLA----------QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYE 227 (307)
T ss_dssp ---------------CTTSCHHHHT----------TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCC
T ss_pred -----CCEEEEEEECCCCCCCHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf -----97044003284225918873----------799980787345159999998597999998999999998616877
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9987899999879999998100184889999999985
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.........++.+++||.+||+.||++|||+.|+|+|
T Consensus 228 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 264 (307)
T d1a06a_ 228 FDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 264 (307)
T ss_dssp CCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 7876666789999999999760897579189998629
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=0 Score=353.53 Aligned_cols=244 Identities=18% Similarity=0.171 Sum_probs=205.5
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. ....+.+.+|.++++.++||||++++++++++...|+|
T Consensus 30 ~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-----~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 104 (352)
T d1koba_ 30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-----PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 104 (352)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-----HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC-----HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 3599899931778299999998999799999988726-----46799999999999867997989199999989999999
Q ss_pred ECCCC-CCHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEE--CCCCEEEEECCCCCCCCCCCC
Q ss_conf 03535-99888860999-999999999999999999999988985257889968991--399299941376321268899
Q 000410 104 RQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT--SWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~--~~~~vkL~DFg~~k~~~~~~~ 179 (1553)
||||+ |+|.+++..++ .+++.+++.|+.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++....
T Consensus 105 mE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~--- 181 (352)
T d1koba_ 105 LEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP--- 181 (352)
T ss_dssp EECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCT---
T ss_pred EECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCC---
T ss_conf 98289980888898638998999999999999999999997792651314455311346788489952563034378---
Q ss_pred CCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH----HHHHHCCCC
Q ss_conf 9999612220489873236841001268863223579999842479999999999809999983379----999826889
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYD 255 (1553)
Q Consensus 180 ~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~----~~~~~~~~~ 255 (1553)
. ....+..|++.|+|||.+. ...++.++||||+||++|||++|.+||..... ..+.++.+.
T Consensus 182 --~---~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~ 246 (352)
T d1koba_ 182 --D---EIVKVTTATAEFAAPEIVD----------REPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE 246 (352)
T ss_dssp --T---SCEEEECSSGGGCCHHHHT----------TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC
T ss_pred --C---CCEEECCCCCCCCCHHHHC----------CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf --8---7201004764534899974----------799897633389899999999688998997999999999847889
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9987899999879999998100184889999999985
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.........++.+++||.+||+.||.+|||+.|+|+|
T Consensus 247 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~H 283 (352)
T d1koba_ 247 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 283 (352)
T ss_dssp CCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 8930024799999999999756996689189999609
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=364.46 Aligned_cols=250 Identities=18% Similarity=0.226 Sum_probs=206.9
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+... ......+.+.+|.++++.++||||+++++++++++..|+|
T Consensus 9 dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~--~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 86 (288)
T d1uu3a_ 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI--IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 86 (288)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH--HHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHC--CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEE
T ss_conf 77898898508790999999989997999999865775--5777899999999999876888861799999989988999
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
|||++ |+|.+++..++.+++.+++.++.|++.||+|||++||+||||||+|||++.++.++|+|||.++.......
T Consensus 87 mEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~--- 163 (288)
T d1uu3a_ 87 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK--- 163 (288)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEECCCCCCEECCCCCC---
T ss_conf 97048987777653159999999999999999999762165088476774123668885388603210242256776---
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799998268899987899
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
.....+..||+.|+|||++. +..++.++||||+||++|||++|.+||...+..............++.
T Consensus 164 --~~~~~~~~GT~~Y~APE~~~----------~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~ 231 (288)
T d1uu3a_ 164 --QARANSFVGTAQYVSPELLT----------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE 231 (288)
T ss_dssp --------CCCCGGGCCHHHHH----------TCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCT
T ss_pred --CCCCCCCCCCCCCCCCEEEC----------CCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf --43335556775525844002----------689896662304569999980388998995999999999718999985
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 999879999998100184889999999985
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 263 i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
..++.+++||.+||+.||++|||++|++++
T Consensus 232 ~~s~~~~~li~~~L~~dP~~R~t~~e~~~~ 261 (288)
T d1uu3a_ 232 KFFPKARDLVEKLLVLDATKRLGCEEMEGY 261 (288)
T ss_dssp TCCHHHHHHHHTTSCSSGGGSTTSGGGTCH
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHCCC
T ss_conf 479999999999855797689197897377
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=357.51 Aligned_cols=248 Identities=17% Similarity=0.209 Sum_probs=207.5
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. .......+.+.+|..+++.++||||+++++++++++..|+|
T Consensus 6 dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~--~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv 83 (337)
T d1o6la_ 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV--IIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHH--CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
T ss_conf 4289889831768499999998999899999981565--44979999999999999867999887787640356421110
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
+||+. |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||.++.......
T Consensus 84 ~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~--- 160 (337)
T d1o6la_ 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--- 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC---
T ss_pred EECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCCCCCCCCC---
T ss_conf 00357986055553256775999999999996521134315962246477784765899888820565200356786---
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799998268899987899
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
...+..||+.|+|||.+. +..|+.++||||+||++|||++|.+||.........+........++.
T Consensus 161 ----~~~~~~GT~~Y~aPE~~~----------~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p~ 226 (337)
T d1o6la_ 161 ----TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR 226 (337)
T ss_dssp ----CBCCCEECGGGCCGGGGS----------SSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred ----CCCCCEECHHHHHHHHCC----------CCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf ----205510088996666504----------898883331022306788998789999996999999998528998986
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCC-----HHHHHHH
Q ss_conf 99987999999810018488999-----9999985
Q 000410 263 IPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 263 i~~~~l~~lI~~mL~~dP~~R~s-----a~e~L~~ 292 (1553)
..++.+++||.+||++||.+|++ ++|+++|
T Consensus 227 ~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~H 261 (337)
T d1o6la_ 227 TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHCC
T ss_conf 68999999998666389344225652349999729
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=0 Score=353.62 Aligned_cols=244 Identities=16% Similarity=0.137 Sum_probs=204.1
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.+.. ....+.+.+|..+++.++||||+++++++++++..|+|
T Consensus 27 ~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~-----~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 101 (350)
T d1koaa2 27 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-----ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 101 (350)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS-----HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEE
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC-----HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 7589889840768199999988999899999984524-----31699999999999867997999299999989999999
Q ss_pred ECCCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEC--CCCEEEEECCCCCCCCCCCC
Q ss_conf 03535-998888609-999999999999999999999999889852578899689913--99299941376321268899
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS--WNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~--~~~vkL~DFg~~k~~~~~~~ 179 (1553)
||||+ |+|.+++.. ++.+++.+++.|+.||+.||.|||++||+||||||+|||++. .+.+||+|||+++.....
T Consensus 102 mE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~-- 179 (350)
T d1koaa2 102 YEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 179 (350)
T ss_dssp ECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT--
T ss_pred EECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEEEEEECCHHEECCCC--
T ss_conf 985799889999976237899999999999999999999756976000154673641688986999545210442565--
Q ss_pred CCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH----HHHHHCCCC
Q ss_conf 9999612220489873236841001268863223579999842479999999999809999983379----999826889
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYD 255 (1553)
Q Consensus 180 ~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~----~~~~~~~~~ 255 (1553)
....+..||+.|+|||++. +..++.++||||+||++|||++|.+||..... ..+....+.
T Consensus 180 ------~~~~~~~gT~~Y~aPEv~~----------~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~ 243 (350)
T d1koaa2 180 ------QSVKVTTGTAEFAAPEVAE----------GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN 243 (350)
T ss_dssp ------SCEEEECSCTTTCCHHHHH----------TCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred ------CCCCEECCCCCCCCHHHHC----------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf ------4320006862421889975----------899872676554659999998598998997999999999847889
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9987899999879999998100184889999999985
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.........++.+++||.+||+.||++|||++|+|+|
T Consensus 244 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 280 (350)
T d1koaa2 244 MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 280 (350)
T ss_dssp SCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHS
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 8942235899999999999756896679089998629
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=353.09 Aligned_cols=249 Identities=15% Similarity=0.200 Sum_probs=203.3
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCC-CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEE
Q ss_conf 56999885025709999999889--5599999951699-74789999999999999961899975488799980887999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGD-YIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~-~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~L 102 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+... .............+..+++.++||||+++++++++++..|+
T Consensus 5 dy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~i 84 (364)
T d1omwa3 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF 84 (364)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEE
T ss_conf 68510188428890999999999997999999845875426679999999999999850899858899999998998899
Q ss_pred EECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 903535-9988886099999999999999999999999998898525788996899139929994137632126889999
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~ 181 (1553)
||||++ |+|.+++..+..+++.+++.|+.||+.||.|||++||+||||||+|||++..+.+||+|||+++......
T Consensus 85 vmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~--- 161 (364)
T d1omwa3 85 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 161 (364)
T ss_dssp EECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC---
T ss_pred EEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEECCCCCEEEEEECEEEECCCCC---
T ss_conf 99914898389998732553278999999999999999997796220444221678588967982201023337886---
Q ss_pred CCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCH---HHHHHHHCCCCCCC
Q ss_conf 996122204898732368410012688632235799998424799999999998099999833---79999826889998
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---HLLAYRRGQYDPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~---~~~~~~~~~~~~~~ 258 (1553)
..+..||+.|+|||.+. ....|+.++||||+||++|||++|++||... ......+.......
T Consensus 162 ------~~~~~GT~~y~APE~~~---------~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~ 226 (364)
T d1omwa3 162 ------PHASVGTHGYMAPEVLQ---------KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 226 (364)
T ss_dssp ------CCSCCSCGGGCCHHHHS---------TTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCC
T ss_pred ------CCCCCCCCCCCHHHHHH---------CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf ------43311345542168760---------389998441046778999999859998888998999999986046888
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHHH
Q ss_conf 789999987999999810018488999-----9999985
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 259 ~~~~i~~~~l~~lI~~mL~~dP~~R~s-----a~e~L~~ 292 (1553)
.++...++.+++||.+||+.||++||+ |+|+++|
T Consensus 227 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 227 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp CCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHCC
T ss_conf 788778999999999985669888088743579999749
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=358.89 Aligned_cols=244 Identities=14% Similarity=0.117 Sum_probs=200.3
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+... ......+.+|..+++.++||||++++++++++...|+|
T Consensus 7 ~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV 82 (322)
T d1s9ja_ 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIK----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 82 (322)
T ss_dssp GEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCC----TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHC----HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 88897897127780999999989996999999875409----78999999999999867999999499999989999999
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 03535-9988886099999999999999999999999998-898525788996899139929994137632126889999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~-~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~ 181 (1553)
|||++ |+|.+++.+++.+++.+++.++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.....
T Consensus 83 mEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~---- 158 (322)
T d1s9ja_ 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 158 (322)
T ss_dssp EECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----
T ss_pred EECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEEECCCCCCCCCC----
T ss_conf 9767998689987424999999999999999999999998599971445779946878998999548776256788----
Q ss_pred CCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH--H-----HC--
Q ss_conf 99612220489873236841001268863223579999842479999999999809999983379999--8-----26--
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY--R-----RG-- 252 (1553)
Q Consensus 182 ~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~--~-----~~-- 252 (1553)
...+..||+.|+|||.+. +..|+.++||||+||++|||++|++||...+.... . .+
T Consensus 159 -----~~~~~~GT~~Y~APEvl~----------~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~ 223 (322)
T d1s9ja_ 159 -----MANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 223 (322)
T ss_dssp -----TC---CCSSCCCCHHHHH----------CSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC--------
T ss_pred -----CCCCCCCCCCCCCCHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf -----621113771411946875----------89989488899899999999988899899887899999988751775
Q ss_pred ----------------------------------CCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf ----------------------------------889-9987899999879999998100184889999999985
Q 000410 253 ----------------------------------QYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ----------------------------------~~~-~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
... +........+.++++||.+||+.||++||||+|+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~H 298 (322)
T d1s9ja_ 224 AETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 298 (322)
T ss_dssp ----------------------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHC
T ss_conf 457742123332211112223541347788766502687667644489999999999868994679089999609
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=350.99 Aligned_cols=245 Identities=16% Similarity=0.155 Sum_probs=202.2
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
.|+..+.||+|+||+||+|++.. ..||+|++.+.. .......+.+.+|.++++.++||||+++++++.++...|+|
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~--~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 93 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG--KQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCS--SCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHH--CCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEE
T ss_conf 5676279701888099999998999399999984444--35889999999999999977899982389999989988999
Q ss_pred ECCCCC-CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 035359-9888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~g-sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
+|||.+ +|...+..+..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 94 ~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~------ 167 (309)
T d1u5ra_ 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------ 167 (309)
T ss_dssp EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS------
T ss_pred EEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCCCEEEEECCCCCCCCC------
T ss_conf 98069994578997379999999999999999999999868976667884217987999789844365334677------
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH----HHHHCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799----99826889998
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~----~~~~~~~~~~~ 258 (1553)
..+..||+.|+|||++... ....|+.++||||+||++|||++|.+||...... ....+....
T Consensus 168 -----~~~~~GT~~Y~APE~~~~~-------~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~-- 233 (309)
T d1u5ra_ 168 -----ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA-- 233 (309)
T ss_dssp -----BCCCCSCGGGCCHHHHTTT-------TSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC--
T ss_pred -----CCCCCCCCCCCCHHHHHCC-------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCC--
T ss_conf -----8731347663688998346-------78886721454558999999987889999979999999998289998--
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 7899999879999998100184889999999985
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
..+...++.+++||.+||+.||++|||++|+|+|
T Consensus 234 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~H 267 (309)
T d1u5ra_ 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (309)
T ss_dssp CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHC
T ss_conf 8878889999999999773796579189999719
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=354.46 Aligned_cols=245 Identities=18% Similarity=0.189 Sum_probs=205.5
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. .......+.+.+|..+++.++||||++++++++++...|+|
T Consensus 5 dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~--~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 82 (316)
T d1fota_ 5 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI--VVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 82 (316)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred HEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHH--CCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEECCEEEEE
T ss_conf 7088889720768089999998999799999984577--54889999999999999863696753303568528800567
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
|||+. |+|.+++..+..+++.+.+.++.||+.||.|||++||+||||||+|||++.++.+||+|||.++....
T Consensus 83 mE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~------ 156 (316)
T d1fota_ 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------ 156 (316)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS------
T ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCHHEEECCCCCEEEECCCCCEEECC------
T ss_conf 65037863223432222111007999999998765541247677055681050386899889831752167124------
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799998268899987899
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
...+..||+.|+|||++. +..|+.++||||+||++|||++|.+||..................++.
T Consensus 157 ----~~~~~~Gt~~Y~APE~l~----------~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~ 222 (316)
T d1fota_ 157 ----VTYTLCGTPDYIAPEVVS----------TKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 222 (316)
T ss_dssp ----CBCCCCSCTTTCCHHHHT----------TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT
T ss_pred ----CCCCCCCCCCCCCHHHHC----------CCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf ----564345763435999983----------899980430465333689997598999996999999999708988997
Q ss_pred CCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHH
Q ss_conf 9998799999981001848899-----99999985
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 i~~~~l~~lI~~mL~~dP~~R~-----sa~e~L~~ 292 (1553)
..++.++++|.+||+.||.+|+ +++++++|
T Consensus 223 ~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~H 257 (316)
T d1fota_ 223 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 257 (316)
T ss_dssp TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCC
T ss_conf 78999999999995449976664310219999819
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=354.90 Aligned_cols=243 Identities=16% Similarity=0.142 Sum_probs=201.1
Q ss_pred CEEEEEEEECCCCEEEEEEEEC--CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 5699988502570999999988--95599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~--~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++. +..||+|++.+.... . .+.+.+|.++++.++||||+++++++.+++..|+|
T Consensus 21 ~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~-~----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 95 (293)
T d1yhwa1 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-K----KELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (293)
T ss_dssp TBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS-C----HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCEEEEEEECCCCCEEEEEEECCCCCEEEEEEEECCCCH-H----HHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEEE
T ss_conf 538878981285829999999899989999998430172-7----99999999999867999880585779889998999
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
||||+ |+|.+.+..++ +++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 96 mEy~~gg~L~~~~~~~~-l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~---- 170 (293)
T d1yhwa1 96 MEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---- 170 (293)
T ss_dssp EECCTTCBHHHHHHHSC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT----
T ss_pred EEECCCCCHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCC----
T ss_conf 97037980898864159-9999999999999999999998797226776888688789968642515641321366----
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH----HHHHCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799----99826889998
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~----~~~~~~~~~~~ 258 (1553)
.......||+.|+|||.+. ...++.++||||+||++|||++|.+||...... ....... +..
T Consensus 171 ---~~~~~~~gt~~Y~aPE~~~----------~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~-~~~ 236 (293)
T d1yhwa1 171 ---SKRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PEL 236 (293)
T ss_dssp ---CCBCCCCSCGGGCCHHHHS----------SSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS-CCC
T ss_pred ---CCCCCCCCCCCCCCHHHHC----------CCCCCCHHCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC-CCC
T ss_conf ---6444444477736826644----------79988012031372999998048899899799999999985799-988
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 7899999879999998100184889999999985
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
..+...++.+++||.+||+.||++|||++|+|+|
T Consensus 237 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~H 270 (293)
T d1yhwa1 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (293)
T ss_dssp SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 8855379999999999866996689099999649
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=353.75 Aligned_cols=245 Identities=17% Similarity=0.219 Sum_probs=204.6
Q ss_pred CEEEEEEEECCCCEEEEEEEEC--CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 5699988502570999999988--95599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~--~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++. +..||+|++.+.. .......+.+.+|..+++.++||||+++++++.+....|+|
T Consensus 42 ~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~--~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v 119 (350)
T d1rdqe_ 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHH--CCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC
T ss_conf 7089889611768089999998999899999982677--45889999999999999974877274034444322222322
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
+||+. |+|.+++..++.+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 120 ~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~------ 193 (350)
T d1rdqe_ 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------ 193 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS------
T ss_pred CCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHCCCCCCCCEEEEECEEEEECCC------
T ss_conf 22334662266675158989999999999999989999859986176799993607789788610103332256------
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799998268899987899
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
...+..|++.|+|||++. +..++.++||||+||++|||++|.+||...+...............+.
T Consensus 194 ----~~~~~~Gt~~Y~APE~~~----------~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~ 259 (350)
T d1rdqe_ 194 ----RTWTLCGTPEALAPEIIL----------SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 259 (350)
T ss_dssp ----CBCCCEECGGGCCHHHHT----------TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred ----CCCCCCCCCCCCCHHHHC----------CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf ----664336763567889971----------799885331145007899997588998995999999998617988976
Q ss_pred CCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHH
Q ss_conf 9998799999981001848899-----99999985
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 i~~~~l~~lI~~mL~~dP~~R~-----sa~e~L~~ 292 (1553)
..++.+.+||.+||+.||.+|+ +++++++|
T Consensus 260 ~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~H 294 (350)
T d1rdqe_ 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred CCCHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHCC
T ss_conf 68999999999983409986065534549999719
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=349.33 Aligned_cols=249 Identities=19% Similarity=0.171 Sum_probs=206.1
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEE
Q ss_conf 56999885025709999999889--55999999516997-4789999999999999961899975488799980887999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDY-IDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~-~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~L 102 (1553)
.|++.+.||+|+||+||+|++.. ..||+|++.+.... .......+.+.+|..+++.++||||++++++++++...|+
T Consensus 11 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (293)
T d1jksa_ 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVIL 90 (293)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEE
T ss_conf 77982798117895999999999998999999875663213406899999999999986799899938899997998999
Q ss_pred EECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCC----CEEEEECCCCCCCCCC
Q ss_conf 903535-99888860999999999999999999999999988985257889968991399----2999413763212688
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN----WLYLSDFASFKPTYIP 177 (1553)
Q Consensus 103 V~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~----~vkL~DFg~~k~~~~~ 177 (1553)
|||||. |+|.+++..++.+++.+++.++.|++.||+|||++||+||||||+|||++..+ .+||+|||.++.....
T Consensus 91 v~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~ 170 (293)
T d1jksa_ 91 ILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 170 (293)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTS
T ss_pred EEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCCEEECCHHHHHHCCCC
T ss_conf 99867786431001035642155789999999999876662542211333012798258986664696433442105777
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH----HHHCC
Q ss_conf 99999961222048987323684100126886322357999984247999999999980999998337999----98268
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~----~~~~~ 253 (1553)
. ...+..+++.|+|||.+. ...++.++||||+||++|||++|.+||....... +..+.
T Consensus 171 ~--------~~~~~~~t~~y~APE~~~----------~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~ 232 (293)
T d1jksa_ 171 N--------EFKNIFGTPEFVAPEIVN----------YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN 232 (293)
T ss_dssp C--------BCSCCCCCGGGCCHHHHT----------TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC
T ss_pred C--------CCCCCCCCCCCCCHHHHC----------CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 6--------312247777430999981----------8999976652214099999970889988999999999998168
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 899987899999879999998100184889999999985
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
+..........++.+++||.+||+.||++|||++|+|+|
T Consensus 233 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 233 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCCHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 888701047889999999999863896689199999619
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=343.40 Aligned_cols=243 Identities=18% Similarity=0.223 Sum_probs=198.8
Q ss_pred EEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE----CCEE
Q ss_conf 6999885025709999999889--559999995169974789999999999999961899975488799980----8879
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----DKAA 100 (1553)
Q Consensus 27 y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~----~~~~ 100 (1553)
|++.+.||+|+||+||+|++.. ..||+|++.+... . ....+.+.+|.++++.++||||+++++++++ +...
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~--~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~ 87 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--T-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 87 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--C-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred EEEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHC--C-HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCEE
T ss_conf 8851697008284999999999995999999851227--9-899999999999998579998506999984033458889
Q ss_pred EEEECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCCCCEEEEC-CCCEEEEECCCCCCCCC
Q ss_conf 99903535-998888609999999999999999999999999889--852578899689913-99299941376321268
Q 000410 101 YLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVLVTS-WNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 101 ~LV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~g--IiH~DIKpeNILi~~-~~~vkL~DFg~~k~~~~ 176 (1553)
|+||||++ |+|.+++...+.+++.+++.++.||+.||+|||+++ |+||||||+|||+++ ++.+||+|||+++....
T Consensus 88 ~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~ 167 (270)
T d1t4ha_ 88 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167 (270)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHCEEECCCCCEEEEECCCCEECCC
T ss_conf 99995789894899975135546999999999999999999978997996876743511667999889800576542368
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCH-HHHHHHHC-CC
Q ss_conf 89999996122204898732368410012688632235799998424799999999998099999833-79999826-88
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-HLLAYRRG-QY 254 (1553)
Q Consensus 177 ~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~-~~~~~~~~-~~ 254 (1553)
. ...+..||+.|+|||.+. +.++.++||||+||++|||++|++||... ......+. ..
T Consensus 168 ------~---~~~~~~GT~~Y~aPE~~~-----------~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~ 227 (270)
T d1t4ha_ 168 ------S---FAKAVIGTPEFMAPEMYE-----------EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 227 (270)
T ss_dssp ------T---SBEESCSSCCCCCGGGGG-----------TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred ------C---CCCCCCCCCCCCCHHHHC-----------CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
T ss_conf ------7---667755381300898847-----------89998671100799999998788999876559999999973
Q ss_pred -CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf -99987899999879999998100184889999999985
Q 000410 255 -DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 -~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.....++...++.+++||.+||+.||++|||++|+|+|
T Consensus 228 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~H 266 (270)
T d1t4ha_ 228 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 266 (270)
T ss_dssp TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 899865675578999999999763797589299999677
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=350.15 Aligned_cols=249 Identities=18% Similarity=0.158 Sum_probs=203.1
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
.|++.+.||+|+||+||+|++.. ..||+|++.+.... ..+.+.+|.++++.++||||+++++++.+++..|+|
T Consensus 13 ~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-----~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lv 87 (288)
T d2jfla1 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE-----ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL 87 (288)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSG-----GGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred CEEEEEEEEECCCCEEEEEEECCCCEEEEEEEECCCCHH-----HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
T ss_conf 759847993077819999999999939999998728999-----999999999999867999988498898009958999
Q ss_pred ECCCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 03535-998888609-9999999999999999999999998898525788996899139929994137632126889999
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~ 181 (1553)
||||+ |+|.+++.. ...+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 88 mEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~---- 163 (288)
T d2jfla1 88 IEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT---- 163 (288)
T ss_dssp EECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH----
T ss_pred EECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECCCCCEEEEECHHHHCCCCC----
T ss_conf 9627998188999862899999999999999999999999889887140700314878999899716123035778----
Q ss_pred CCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH----HHHHHHCCCCCC
Q ss_conf 9961222048987323684100126886322357999984247999999999980999998337----999982688999
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~----~~~~~~~~~~~~ 257 (1553)
.....+..|++.|+|||++.... .....|+.++||||+||++|||++|.+||.... +..+.++.....
T Consensus 164 ---~~~~~~~~Gt~~y~APE~l~~~~-----~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~ 235 (288)
T d2jfla1 164 ---IQRRDSFIGTPYWMAPEVVMCET-----SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL 235 (288)
T ss_dssp ---HHHHTCCCSCCTTCCHHHHTTCS-----TTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC
T ss_pred ---CCCCCCCCCCCCCCCHHHHHHCC-----CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf ---64100102562647999983202-----5788888066578789999998208899999899999999970799877
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 87899999879999998100184889999999985
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
..+...++.+++||.+||+.||++|||++|+|+|
T Consensus 236 -~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~h 269 (288)
T d2jfla1 236 -AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQH 269 (288)
T ss_dssp -SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred -CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf -7656699999999999766996689199999629
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=0 Score=344.24 Aligned_cols=255 Identities=21% Similarity=0.228 Sum_probs=210.7
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCC-C---CHHHHHHHHHHHHHHHHCCC-CCCEEEEEEEEEECC
Q ss_conf 56999885025709999999889--55999999516997-4---78999999999999996189-997548879998088
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDY-I---DLREYERRLFHIRETFRSID-HPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~-~---~~~~~~~~l~~e~~~l~~l~-hpnIl~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.... . ......+.+.+|..+++.+. ||||+++++++++++
T Consensus 4 ~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 83 (277)
T d1phka_ 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 83 (277)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred CCEECEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
T ss_conf 38885288417684999999999998999999962446411478889999999999999998507997479976214676
Q ss_pred EEEEEECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCC
Q ss_conf 7999903535-998888609999999999999999999999999889852578899689913992999413763212688
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 99 ~~~LV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~ 177 (1553)
..|+||||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||.++.....
T Consensus 84 ~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 163 (277)
T d1phka_ 84 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 163 (277)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred CEEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCHHEEECCCC
T ss_conf 05999976898668999986599999999999999999999998759943234625489868998387124031672688
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH----HHHHCC
Q ss_conf 9999996122204898732368410012688632235799998424799999999998099999833799----998268
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~----~~~~~~ 253 (1553)
. ......|+..|+|||.+..... .....++.++||||+||++|||++|++||...... .+..+.
T Consensus 164 ~--------~~~~~~gt~~y~~PE~~~~~~~----~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~ 231 (277)
T d1phka_ 164 E--------KLREVCGTPSYLAPEIIECSMN----DNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGN 231 (277)
T ss_dssp C--------CBCCCCSCGGGCCHHHHHHHHC----TTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred C--------CEEEEECCCCCCCHHHHHCCCC----CCCCCCCCHHEECCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 7--------2134524678889888605344----567889923318565602310322888988999999999998189
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 899987899999879999998100184889999999985
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
+..........++.+++||.+||+.||++||+++|+|+|
T Consensus 232 ~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h 270 (277)
T d1phka_ 232 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 270 (277)
T ss_dssp CCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 888985434689999999999765896689199999739
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=343.69 Aligned_cols=243 Identities=16% Similarity=0.142 Sum_probs=202.0
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. .....+.+|.++|+.++||||++++++++++...|+|
T Consensus 6 rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~------~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lv 79 (321)
T d1tkia_ 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG------TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC------CCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
T ss_conf 0588789831778399999998999699999975786------6599999999999857997989098999889988999
Q ss_pred ECCCC-CCHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECC--CCEEEEECCCCCCCCCCCC
Q ss_conf 03535-99888860999-99999999999999999999998898525788996899139--9299941376321268899
Q 000410 104 RQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW--NWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~--~~vkL~DFg~~k~~~~~~~ 179 (1553)
||||. |+|.+++..++ .+++.+++.|+.||+.||+|||++||+||||||+|||++.+ +.++|+|||.++....
T Consensus 80 mE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~--- 156 (321)
T d1tkia_ 80 FEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP--- 156 (321)
T ss_dssp ECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCT---
T ss_pred EECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCHHHCCCC---
T ss_conf 95389980889987538999999999999999999999987699751355444344378851899764411100346---
Q ss_pred CCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH----HHHHCCCC
Q ss_conf 99996122204898732368410012688632235799998424799999999998099999833799----99826889
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYD 255 (1553)
Q Consensus 180 ~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~----~~~~~~~~ 255 (1553)
.....+..+++.|+|||.+. ...++.++||||+||++|+|++|.+||...... .+.++.+.
T Consensus 157 -----~~~~~~~~~t~~y~ape~~~----------~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~ 221 (321)
T d1tkia_ 157 -----GDNFRLLFTAPEYYAPEVHQ----------HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT 221 (321)
T ss_dssp -----TCEEEEEESCGGGSCHHHHT----------TCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC
T ss_pred -----CCCCCCCCCCCCCCCCHHCC----------CCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf -----77532122332223402104----------877784011302799999998289999998999999999838999
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9987899999879999998100184889999999985
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.........++.+++||.+||..||++|||++|+|+|
T Consensus 222 ~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h 258 (321)
T d1tkia_ 222 FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 8802236789999999999866996689099999639
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=348.89 Aligned_cols=245 Identities=19% Similarity=0.275 Sum_probs=202.7
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE--CCEEE
Q ss_conf 56999885025709999999889--559999995169974789999999999999961899975488799980--88799
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~--~~~~~ 101 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+... . +...+.+.+|.++++.++||||+++++++.+ +...|
T Consensus 5 dy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~--~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ 81 (269)
T d2java1 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM--T-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 81 (269)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTS--C-HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEE
T ss_pred HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHC--C-HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEE
T ss_conf 37996798308891999999999997999999874657--9-79999999999999977899982489999917899899
Q ss_pred EEECCCC-CCHHHHHCC----CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CEECCCCCCCEEEECCCCEEEEECCCC
Q ss_conf 9903535-998888609----999999999999999999999999889-----852578899689913992999413763
Q 000410 102 LLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKG-----ICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 102 LV~e~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qil~aL~~lH~~g-----IiH~DIKpeNILi~~~~~vkL~DFg~~ 171 (1553)
+|||||+ |+|.+++.. +..+++.+++.++.|++.||.|||++| |+||||||+|||++.++.+||+|||.+
T Consensus 82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a 161 (269)
T d2java1 82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 161 (269)
T ss_dssp EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCEEEEECCCE
T ss_conf 99956899938999985154578999999999999999999999971677887885867654257478885798001000
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH--
Q ss_conf 212688999999612220489873236841001268863223579999842479999999999809999983379999--
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-- 249 (1553)
Q Consensus 172 k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~-- 249 (1553)
+..... .....+..||+.|+|||.+. ...++.++||||+||++|||++|.+||........
T Consensus 162 ~~~~~~-------~~~~~~~~gt~~Y~APE~l~----------~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~ 224 (269)
T d2java1 162 RILNHD-------TSFAKAFVGTPYYMSPEQMN----------RMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG 224 (269)
T ss_dssp HHC------------------CCCSCCCHHHHT----------TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred EECCCC-------CCCCCCCCCCCCCCCHHHHC----------CCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 322457-------77556677882327999983----------9999938988752789999801889989989999999
Q ss_pred --HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf --82688999878999998799999981001848899999999852
Q 000410 250 --RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 250 --~~~~~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 293 (1553)
..+.+. .++...++.+++||.+||+.||++|||++|+|+|.
T Consensus 225 ~i~~~~~~---~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp 267 (269)
T d2java1 225 KIREGKFR---RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 267 (269)
T ss_dssp HHHHTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred HHHCCCCC---CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHCC
T ss_conf 99718998---89743599999999997679955791899997298
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=342.67 Aligned_cols=248 Identities=17% Similarity=0.173 Sum_probs=200.9
Q ss_pred CEEEEEEEECCCCEEEEEEEECC-------CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC-CCCCEEEEEEEEEEC
Q ss_conf 56999885025709999999889-------5599999951699747899999999999999618-999754887999808
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~-------~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIl~~~~~~~~~ 97 (1553)
+|++.+.||+|+||+||+|++.+ ..||+|++.... .......+.+|..++..+ +||||+++++++.+.
T Consensus 38 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~ 113 (325)
T d1rjba_ 38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA----DSSEREALMSELKMMTQLGSHENIVNLLGACTLS 113 (325)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HEEEEEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEECCCC----CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 939701983078819999998578855420499999966335----8789999999999999715899686877888629
Q ss_pred CEEEEEECCCC-CCHHHHHCCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
Q ss_conf 87999903535-9988886099-----------------------99999999999999999999999889852578899
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP-----------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 153 (1553)
Q Consensus 98 ~~~~LV~e~~~-gsL~d~l~~~-----------------------~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpe 153 (1553)
...|+|||||+ |+|.+++..+ +.+++.+++.|+.|++.||+|||++||+||||||+
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~ 193 (325)
T d1rjba_ 114 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAAR 193 (325)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGG
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHH
T ss_conf 95899997279995999998625777510221000012220012577899999999999999999997399050527032
Q ss_pred CEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 68991399299941376321268899999961222048987323684100126886322357999984247999999999
Q 000410 154 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233 (1553)
Q Consensus 154 NILi~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~e 233 (1553)
|||++.++.+||+|||+++...... ......+..+++.|+|||.+. ...++.++||||+||++||
T Consensus 194 Nill~~~~~~Kl~DFGla~~~~~~~-----~~~~~~~~~gt~~y~aPE~l~----------~~~~~~~~DiwS~Gvil~e 258 (325)
T d1rjba_ 194 NVLVTHGKVVKICDFGLARDIMSDS-----NYVVRGNARLPVKWMAPESLF----------EGIYTIKSDVWSYGILLWE 258 (325)
T ss_dssp GEEEETTTEEEECCCGGGSCGGGCT-----TSEEETTEEECGGGCCHHHHH----------HCCCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEEECCCCCCCCCCC-----CEEEECCCCCCCCCCCHHHHC----------CCCCCCCEECCCHHHHHHH
T ss_conf 1443459828985142222045778-----615623435787657838872----------7999963303000399999
Q ss_pred HHC-CCCCCCCH----HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 980-99999833----79999826889998789999987999999810018488999999998520
Q 000410 234 LFL-EVPFFELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 234 Llt-g~~~f~~~----~~~~~~~~~~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
|++ |.+||... .+.......+.+ ..+...++.+++||.+||+.||++|||++|+++++.
T Consensus 259 mlt~g~~Pf~~~~~~~~~~~~~~~~~~~--~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 259 IFSLGVNPYPGIPVDANFYKLIQNGFKM--DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp HTTTSCCSSTTCCCSHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHCCCCC--CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 9838999999989899999998569989--988767899999999975889668939999999974
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=347.67 Aligned_cols=249 Identities=18% Similarity=0.243 Sum_probs=200.4
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.... ........+.++..+.+.++||||+++++++++++..|+|
T Consensus 3 dy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~-~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEECCCCCEEEEEEECCCCCEEEEEEECHHHCC-CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEE
T ss_conf 718865894087828999999999989999998055533-8489999999999999847999687898897049831677
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
|||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++..+.+||+|||.++.......
T Consensus 82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~--- 158 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--- 158 (320)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC---
T ss_pred EEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECCCCCEECCCCCHHHHCCCCCC---
T ss_conf 75037980899864047899999999999999999999868934034765404444899630155530232356653---
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799998268899987899
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
......||+.|+|||.+. ...++.++||||+||++|||++|++||..................++.
T Consensus 159 ----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p~ 224 (320)
T d1xjda_ 159 ----KTNTFCGTPDYIAPEILL----------GQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 224 (320)
T ss_dssp ----CBCCCCSCGGGCCHHHHT----------TCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred ----CCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf ----345457877768999982----------799883232011227898987388999998999999999718998975
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCHH-HHHHH
Q ss_conf 9998799999981001848899999-99985
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAE-SYLQN 292 (1553)
Q Consensus 263 i~~~~l~~lI~~mL~~dP~~R~sa~-e~L~~ 292 (1553)
..++.+++||.+||+.||++||++. ++++|
T Consensus 225 ~~s~~~~dli~~~L~~dP~~R~s~~~~l~~h 255 (320)
T d1xjda_ 225 WLEKEAKDLLVKLFVREPEKRLGVRGDIRQH 255 (320)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHC
T ss_conf 6799999999996544898783889999809
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=345.95 Aligned_cols=248 Identities=19% Similarity=0.211 Sum_probs=196.1
Q ss_pred EEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEECC
Q ss_conf 99885025709999999889--5599999951699747899999999999999618999754887999808879999035
Q 000410 29 LKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 29 ~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV~e~ 106 (1553)
..+.||+|+||+||+|++.. ..||+|++.+...........+.+.+|..+++.++||||+++++++.++...|+||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred CCEEECCCCCEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHHHH
T ss_conf 56385127282999999999996999999842021245679999999999999867999986898542258740220455
Q ss_pred CCC-CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 359-9888860999999999999999999999999988985257889968991399299941376321268899999961
Q 000410 107 FFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 185 (1553)
Q Consensus 107 ~~g-sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~~~~ 185 (1553)
+.+ ++......+..+++.+++.++.||+.||+|||++||+||||||+|||++..+.+||+|||.++....+..
T Consensus 82 ~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~------ 155 (299)
T d1ua2a_ 82 METDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR------ 155 (299)
T ss_dssp CSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC------
T ss_pred HCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC------
T ss_conf 34507765541266778999999999999999886316355035776258853778411465761000578755------
Q ss_pred EEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH----HHHHHCCCCCC----
Q ss_conf 2220489873236841001268863223579999842479999999999809999983379----99982688999----
Q 000410 186 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPS---- 257 (1553)
Q Consensus 186 ~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~----~~~~~~~~~~~---- 257 (1553)
...+..|++.|+|||.+.. ...++.++||||+||++|||++|.+||..... ..+.+....+.
T Consensus 156 -~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~ 225 (299)
T d1ua2a_ 156 -AYTHQVVTRWYRAPELLFG---------ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW 225 (299)
T ss_dssp -CCCCSCCCCTTCCHHHHTT---------CSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred -CCCCEECCHHHCCHHHHCC---------CCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHC
T ss_conf -4330204733363999726---------778880564363042899998596999999999999999985189972545
Q ss_pred ------------CC--------CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf ------------87--------899999879999998100184889999999985
Q 000410 258 ------------QH--------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ------------~~--------~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.. .....++.+++||.+||+.||++||||+|+|+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~H 280 (299)
T d1ua2a_ 226 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280 (299)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CCHHCCCHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 2100021344303478988678565689999999999763894569089999679
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=339.66 Aligned_cols=252 Identities=16% Similarity=0.175 Sum_probs=202.8
Q ss_pred CEEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEEC
Q ss_conf 56999885025709999999889559999995169974789999999999999961899975488799980887999903
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV~e 105 (1553)
+|++.+.||+|+||.||+|+.++ .||||++...... ....+.+.+|.++++.++||||+++++++. +...|+|+|
T Consensus 9 ~~~~~~~lG~G~fg~Vy~~~~~~-~vAvK~~~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~E 83 (276)
T d1uwha_ 9 QITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPT---PQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQ 83 (276)
T ss_dssp CCCCCSEEEECSSCEEEEEESSS-EEEEEECCCSSCC---TTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred CEEEEEEEEECCCCEEEEEEECC-EEEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCCCEEEEEEEEE-CCEEEEEEE
T ss_conf 18998898307885899999999-8999999734699---899999999999998479987864567971-558999996
Q ss_pred CCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 535-998888609-999999999999999999999999889852578899689913992999413763212688999999
Q 000410 106 YFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 106 ~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~~ 183 (1553)
|++ |+|++++.. +..+++.++..|+.|++.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~----- 158 (276)
T d1uwha_ 84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS----- 158 (276)
T ss_dssp CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC----------
T ss_pred CCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHEEECCCCCEEECCCCCEEECCCCC-----
T ss_conf 589988899985235789999999999999999888750999516147899798189978875002213335567-----
Q ss_pred CCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCH----HHHHHH-HCCCCCC-
Q ss_conf 6122204898732368410012688632235799998424799999999998099999833----799998-2688999-
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYR-RGQYDPS- 257 (1553)
Q Consensus 184 ~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~----~~~~~~-~~~~~~~- 257 (1553)
......+..||+.|+|||.+... ....|+.++||||+||++|||++|.+||... ...... ++...+.
T Consensus 159 ~~~~~~~~~gt~~y~APE~l~~~-------~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~ 231 (276)
T d1uwha_ 159 GSHQFEQLSGSILWMAPEVIRMQ-------DKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDL 231 (276)
T ss_dssp -------CCCCGGGCCHHHHTTC-------SSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCG
T ss_pred CCCCCCCCCCCCCCCCHHHHHCC-------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 76312566557431799999505-------68999953151635999999997889989989699999999658889860
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 8789999987999999810018488999999998520
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
...+...++.+++||.+||+.||++|||+.|++++++
T Consensus 232 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le 268 (276)
T d1uwha_ 232 SKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268 (276)
T ss_dssp GGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 0036555499999999975889768929999999999
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-45 Score=335.40 Aligned_cols=253 Identities=15% Similarity=0.116 Sum_probs=199.5
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--C---EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEE
Q ss_conf 56999885025709999999889--5---599999951699747899999999999999618999754887999808879
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~---~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||+||+|++.. + .||+|++... ......+.+.+|.++++.++||||+++++++.++...
T Consensus 27 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~ 102 (299)
T d1jpaa_ 27 CVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG----YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV 102 (299)
T ss_dssp GEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS----CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred HCEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCC----CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEE
T ss_conf 427856980278829999999579978899999997844----5989999999999999857998886189999628877
Q ss_pred EEEECCCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf 99903535-998888609-9999999999999999999999998898525788996899139929994137632126889
Q 000410 101 YLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~LV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~ 178 (1553)
|+|+|||+ |+|.+++.. .+.+++.++..|+.|++.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 103 ~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~ 182 (299)
T d1jpaa_ 103 MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 182 (299)
T ss_dssp EEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCCEECCCCC
T ss_conf 99997227985300210456799999999999999998898852798357615044898899919988844315756777
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCHHHHHHHHCC-CCC
Q ss_conf 9999961222048987323684100126886322357999984247999999999980-99999833799998268-899
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g~~~f~~~~~~~~~~~~-~~~ 256 (1553)
.... ........+++.|+|||.+. ...++.++||||+||++|||++ |.+||............ ...
T Consensus 183 ~~~~--~~~~~~~~~t~~y~aPE~~~----------~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~ 250 (299)
T d1jpaa_ 183 SDPT--YTSALGGKIPIRWTAPEAIQ----------YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY 250 (299)
T ss_dssp ---------------CGGGSCHHHHH----------SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC
T ss_pred CCCE--EEECCCCCCCCCCCCHHHHH----------CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 7653--65025666883003878883----------69978612144535789999867999999999999999997378
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 98789999987999999810018488999999998520
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 ~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
....+...++.+.+||.+||+.||++||++.|+++.+.
T Consensus 251 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~ 288 (299)
T d1jpaa_ 251 RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288 (299)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 89997422699999999975879768929999999999
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=4.2e-45 Score=331.91 Aligned_cols=253 Identities=19% Similarity=0.218 Sum_probs=206.2
Q ss_pred CEEEEEEEECCCCEEEEEEEEC--CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC----E
Q ss_conf 5699988502570999999988--955999999516997478999999999999996189997548879998088----7
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----A 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~--~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~----~ 99 (1553)
+|++.+.||+|+||.||+|++. +..||+|++.+.. .......+.+.+|.++++.++||||++++++++.+. .
T Consensus 8 rY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~ 85 (277)
T d1o6ya_ 8 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADL--ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 85 (277)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT--TTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEE
T ss_pred EEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECHHH--CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCE
T ss_conf 0698689960899299999999999899999985566--46989999999999999856999887311435432688766
Q ss_pred EEEEECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf 999903535-9988886099999999999999999999999998898525788996899139929994137632126889
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~LV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~ 178 (1553)
.|+||||++ ++|.+++..++.+++.+++.|+.||+.||+|||++||+||||||+|||++..+..+++|||.++......
T Consensus 86 ~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~ 165 (277)
T d1o6ya_ 86 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 165 (277)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC---
T ss_pred EEEEEECCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCC
T ss_conf 99999778898710112035899999999999999999999985795276346755665754320100344432212354
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH----HHHCCC
Q ss_conf 9999961222048987323684100126886322357999984247999999999980999998337999----982688
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~----~~~~~~ 254 (1553)
. ......+..|++.|+|||++. ...+++++||||+||++|||++|.+||....... ..+...
T Consensus 166 ~----~~~~~~~~~Gt~~Y~aPE~~~----------~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~ 231 (277)
T d1o6ya_ 166 N----SVTQTAAVIGTAQYLSPEQAR----------GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP 231 (277)
T ss_dssp -----------------TTCCHHHHT----------TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC
T ss_pred C----CCCCCCCCCCCCCCCCHHHHC----------CCCCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 4----333346425762436999983----------99999663202652899999769799899699999999984699
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-CHHHHHHHHH
Q ss_conf 999878999998799999981001848899-9999998520
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRF-SAESYLQNYA 294 (1553)
Q Consensus 255 ~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~-sa~e~L~~~~ 294 (1553)
.+........++.++++|.+||+.||++|| +++++++.+.
T Consensus 232 ~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~ 272 (277)
T d1o6ya_ 232 IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272 (277)
T ss_dssp CCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCCHHCCCCCHHHHHHHHHHCCCCHHHCHHHHHHHHHHHH
T ss_conf 99710034789999999999866797677739999999999
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=337.48 Aligned_cols=244 Identities=17% Similarity=0.175 Sum_probs=199.2
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.+.. .. .+++.+|.++++.++||||+++++++.++...|+|
T Consensus 18 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~--~~----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (287)
T d1opja_ 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--ME----VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91 (287)
T ss_dssp GEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTC--SC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HEEEEEEEEECCCEEEEEEEECCCCEEEEEEEECCCC--CH----HHHHHHHHHHHHHCCCCCEECCCCCEEECCEEEEE
T ss_conf 9398659820888089999999999699999977761--03----99999999999867999882677527457854787
Q ss_pred ECCCC-CCHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCC
Q ss_conf 03535-998888609--999999999999999999999999889852578899689913992999413763212688999
Q 000410 104 RQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~ 180 (1553)
+||++ |+|.+++.. ...+++..++.|+.|++.||+|||++||+||||||+|||++.++.+||+|||.++.....
T Consensus 92 ~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~--- 168 (287)
T d1opja_ 92 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD--- 168 (287)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS---
T ss_pred EECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCC---
T ss_conf 63146760677753035541579999999999999788898789305760457689989992898324454653788---
Q ss_pred CCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCHHHHHH---HHCCCCC
Q ss_conf 999612220489873236841001268863223579999842479999999999809-999983379999---8268899
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAY---RRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~~~f~~~~~~~~---~~~~~~~ 256 (1553)
.........+++.|+|||.+. ...++.++||||+||++|||+++ .|+|........ ....+.
T Consensus 169 ---~~~~~~~~~g~~~y~aPE~~~----------~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~- 234 (287)
T d1opja_ 169 ---TYTAHAGAKFPIKWTAPESLA----------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYR- 234 (287)
T ss_dssp ---SSEEETTEEECGGGCCHHHHH----------HCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC-
T ss_pred ---CCEEECCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCC-
T ss_conf ---722103556654666927872----------799981043021789999998679988774259999999855888-
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 9878999998799999981001848899999999852
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 257 ~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 293 (1553)
...+...++.+++||.+||+.||++|||+.|+++.+
T Consensus 235 -~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L 270 (287)
T d1opja_ 235 -MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270 (287)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred -CCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHH
T ss_conf -888743309999999997577976893999999999
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=336.30 Aligned_cols=248 Identities=16% Similarity=0.136 Sum_probs=202.2
Q ss_pred CEEEEEEEECCCCEEEEEEEECCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEE
Q ss_conf 569998850257099999998895-5999999516997478999999999999996189997548879998088799990
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~-~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV~ 104 (1553)
+|++.+.||+|+||.||+|++.++ .||||++.+.. .. .+.+.+|.++++.++||||+++++++..+...|+|+
T Consensus 6 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~--~~----~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~ 79 (263)
T d1sm2a_ 6 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVF 79 (263)
T ss_dssp CEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSS--SC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HCEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCC--CC----HHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEE
T ss_conf 958888982088829999998899999999987886--76----899999999999668997565352431599337999
Q ss_pred CCCC-CCHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 3535-9988886099-9999999999999999999999988985257889968991399299941376321268899999
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 e~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
||++ |+|.+++... ..+++..+..|+.|++.||.|+|+++|+||||||+|||++.++.+||+|||+++.......
T Consensus 80 E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~--- 156 (263)
T d1sm2a_ 80 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--- 156 (263)
T ss_dssp ECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC-------------
T ss_pred EECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCCCEEECCCCHHEECCCCCC---
T ss_conf 83699918997520134788999999999999987765316431044315326666887768655321002368873---
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCHHHHHHHHCCC-CCCCCC
Q ss_conf 9612220489873236841001268863223579999842479999999999809-99998337999982688-999878
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQY-DPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~~~f~~~~~~~~~~~~~-~~~~~~ 260 (1553)
.......|++.|+|||.+. ...++.++||||+||++|||+++ .+||.......+..... ......
T Consensus 157 ---~~~~~~~gt~~y~aPE~l~----------~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~ 223 (263)
T d1sm2a_ 157 ---TSSTGTKFPVKWASPEVFS----------FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 223 (263)
T ss_dssp -----------CTTSCCHHHHT----------TCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCC
T ss_pred ---EEECCEECCCCCCCHHHHC----------CCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf ---3504300176667857860----------799984033210599999998789888778999999999980688899
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf 99999879999998100184889999999985201
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 261 ~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~~ 295 (1553)
+...++.+.+||.+||+.||++|||++|++++++.
T Consensus 224 p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 258 (263)
T d1sm2a_ 224 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258 (263)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf 54367999999999765797689199999999999
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=332.97 Aligned_cols=240 Identities=20% Similarity=0.185 Sum_probs=189.3
Q ss_pred CEEEE-EEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHH-HCCCCCCEEEEEEEEEE----C
Q ss_conf 56999-885025709999999889--5599999951699747899999999999999-61899975488799980----8
Q 000410 26 NLVLK-EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETF-RSIDHPHVWAFQFWQET----D 97 (1553)
Q Consensus 26 ~y~~~-~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l-~~l~hpnIl~~~~~~~~----~ 97 (1553)
+|.+. +.||+|+||+||+|++.. ..||+|++.+. . .+.+|.+++ +..+||||+++++++++ +
T Consensus 12 ~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~------~----~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~ 81 (335)
T d2ozaa1 12 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------P----KARREVELHWRASQCPHIVRIVDVYENLYAGR 81 (335)
T ss_dssp TEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS------H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred CEEEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCC------H----HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
T ss_conf 8798107965454869999998899989999998974------7----79999999998669999782989995034689
Q ss_pred CEEEEEECCCC-CCHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEC---CCCEEEEECCCC
Q ss_conf 87999903535-99888860999--9999999999999999999999889852578899689913---992999413763
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS---WNWLYLSDFASF 171 (1553)
Q Consensus 98 ~~~~LV~e~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~---~~~vkL~DFg~~ 171 (1553)
...|+|||||+ |+|++++..++ .+++.+++.|+.||+.||+|||++||+||||||+|||++. .+.+||+|||++
T Consensus 82 ~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a 161 (335)
T d2ozaa1 82 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 161 (335)
T ss_dssp EEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 78999997789984999998627877579999999999999999999769864441002201135555663113545512
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH----H
Q ss_conf 212688999999612220489873236841001268863223579999842479999999999809999983379----9
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----L 247 (1553)
Q Consensus 172 k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~----~ 247 (1553)
+...... ...+..|++.|+|||.+. ...|+.++||||+||++|+|++|.+||..... .
T Consensus 162 ~~~~~~~--------~~~~~~gt~~y~aPE~~~----------~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~ 223 (335)
T d2ozaa1 162 KETTSHN--------SLTTPCYTPYYVAPEVLG----------PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 223 (335)
T ss_dssp EECCCCC--------CCCCCSCCCSSCCCCCCC----------GGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC----
T ss_pred EECCCCC--------CCCCCCCCCCCCCCHHHC----------CCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 3336888--------643226775637927774----------8988888888764516778865889988988778899
Q ss_pred HHHHCCCCCCCCCC----CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 99826889998789----99998799999981001848899999999852
Q 000410 248 AYRRGQYDPSQHLE----KIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 248 ~~~~~~~~~~~~~~----~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 293 (1553)
............++ ...++.+++||.+||+.||++|||+.|+|+|.
T Consensus 224 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp 273 (335)
T d2ozaa1 224 GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 273 (335)
T ss_dssp ----CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSH
T ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCH
T ss_conf 99999853888889854346999999999997569965790999997098
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7e-45 Score=329.82 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=198.4
Q ss_pred CEEEEEE-EECCCCEEEEEEEECC---C-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEE
Q ss_conf 5699988-5025709999999889---5-599999951699747899999999999999618999754887999808879
Q 000410 26 NLVLKEV-LGGSRFFKSILCKHDE---G-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~-LG~G~f~~V~~a~~~~---~-~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~ 100 (1553)
+|.+.+. ||+|+||.||+|.+.. + .||||++.+. ......+.+.+|.++++.++||||++++++++++ ..
T Consensus 9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~----~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~-~~ 83 (285)
T d1u59a_ 9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG----TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE-AL 83 (285)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS----CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SE
T ss_pred CEEECCCEEECCCCEEEEEEEEECCCCCEEEEEEEECHH----CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCC-EE
T ss_conf 718878487306080999999960897689999998820----3978999999999999867998880686560368-07
Q ss_pred EEEECCCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf 99903535-998888609-9999999999999999999999998898525788996899139929994137632126889
Q 000410 101 YLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~LV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~ 178 (1553)
|+||||++ |+|.+++.. +..+++.++..|+.|++.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~ 163 (285)
T d1u59a_ 84 MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 163 (285)
T ss_dssp EEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEECCCHHHHCCCCCC
T ss_conf 99998078996899752125699999999999999998789986881057676466045468854203313421155434
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCHH---HHH-HHHCC
Q ss_conf 9999961222048987323684100126886322357999984247999999999980-999998337---999-98268
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH---LLA-YRRGQ 253 (1553)
Q Consensus 179 ~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g~~~f~~~~---~~~-~~~~~ 253 (1553)
..........+++.|+|||.+. ...++.++||||+||++|||++ |.+||.... ... +.++.
T Consensus 164 ----~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~ 229 (285)
T d1u59a_ 164 ----SYYTARSAGKWPLKWYAPECIN----------FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGK 229 (285)
T ss_dssp ----CEECCCCSSCCCGGGCCHHHHH----------HCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTC
T ss_pred ----CCCCCCCCCCCCCCCCCHHHHH----------CCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
T ss_conf ----3211356211374335868872----------79999541232201789999938999999979999999998189
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 89998789999987999999810018488999999998520
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 254 ~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
. ...+...++.+.+||.+||+.||++||++.++++.++
T Consensus 230 ~---~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~ 267 (285)
T d1u59a_ 230 R---MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267 (285)
T ss_dssp C---CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred C---CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 9---9999767899999999975779768909999999999
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=333.75 Aligned_cols=244 Identities=16% Similarity=0.120 Sum_probs=196.8
Q ss_pred CEEEEEEEECCCCEEEEEEEECCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEE
Q ss_conf 569998850257099999998895-5999999516997478999999999999996189997548879998088799990
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~-~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV~ 104 (1553)
+|++.+.||+|+||.||+|+++++ .||||++.+.. .. .+.+.+|.++++.++||||+++++++. +...|+|+
T Consensus 14 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~--~~----~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~ 86 (272)
T d1qpca_ 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MS----PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIIT 86 (272)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SC----HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred HEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCC--CC----HHHHHHHHHHHHHCCCCCEEEEEEEEC-CCCEEEEE
T ss_conf 938867981079828999999999999999986476--88----899999999998679998857873104-59769999
Q ss_pred CCCC-CCHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 3535-99888860999--99999999999999999999998898525788996899139929994137632126889999
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 e~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~ 181 (1553)
||++ |+|.+++.... .+++.++..|+.|++.||.|||+++|+||||||+|||++.++.+||+|||+++.....
T Consensus 87 Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~---- 162 (272)
T d1qpca_ 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN---- 162 (272)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSS----
T ss_pred EECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCCEEECCCC----
T ss_conf 9578982888875147898878899999999999999997489546756422515620244042341014773588----
Q ss_pred CCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCHHHHHHHHCCC-CCCCC
Q ss_conf 99612220489873236841001268863223579999842479999999999809-99998337999982688-99987
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQY-DPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~~~f~~~~~~~~~~~~~-~~~~~ 259 (1553)
.........+++.|+|||.+. ...++.++||||+||++|||+++ .|||............. .....
T Consensus 163 --~~~~~~~~~gt~~y~APE~~~----------~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~ 230 (272)
T d1qpca_ 163 --EYTAREGAKFPIKWTAPEAIN----------YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMV 230 (272)
T ss_dssp --CEECCTTCCCCTTTSCHHHHH----------HCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred --CCCCCCCCCCCCCCCCHHHHH----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCC
T ss_conf --644203567744445828983----------79998245645257999999968988888889999999997068888
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 899999879999998100184889999999985
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.+...++.+++||.+||+.||++|||++++++.
T Consensus 231 ~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~ 263 (272)
T d1qpca_ 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263 (272)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 965571999999999758897689399999998
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-45 Score=329.25 Aligned_cols=249 Identities=15% Similarity=0.091 Sum_probs=197.1
Q ss_pred CEEEE-EEEECCCCEEEEEEEECC----CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEE
Q ss_conf 56999-885025709999999889----5599999951699747899999999999999618999754887999808879
Q 000410 26 NLVLK-EVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~-~~LG~G~f~~V~~a~~~~----~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~ 100 (1553)
.+.+. +.||+|+||+||+|.+.. ..||+|++.... ......+.+.+|.++++.++||||++++++++++ ..
T Consensus 7 ~~~le~k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~ 82 (277)
T d1xbba_ 7 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA---NDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SW 82 (277)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC--------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SE
T ss_pred HCEECCCCCCCCCCEEEEEEEECCCCCCEEEEEEEECHHH---CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC-CE
T ss_conf 3700187834587829999998169738599999988010---8989999999999999867998985277775059-77
Q ss_pred EEEECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCC
Q ss_conf 99903535-99888860999999999999999999999999988985257889968991399299941376321268899
Q 000410 101 YLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 101 ~LV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~ 179 (1553)
|+||||++ |+|.+++.....+++.++..|+.||+.||+|||++||+||||||+|||++.++.++|+|||+++......
T Consensus 83 ~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~- 161 (277)
T d1xbba_ 83 MLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE- 161 (277)
T ss_dssp EEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC-
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCC-
T ss_conf 9999747889689997522578999999999999999766874795567776113102356751234134533134323-
Q ss_pred CCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCHHHHHHHHCCC-CCC
Q ss_conf 999961222048987323684100126886322357999984247999999999980-999998337999982688-999
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPS 257 (1553)
Q Consensus 180 ~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g~~~f~~~~~~~~~~~~~-~~~ 257 (1553)
..........|++.|+|||.+. ...++.++||||+||++|||++ |.+||............. ...
T Consensus 162 ---~~~~~~~~~~gt~~y~APE~l~----------~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~ 228 (277)
T d1xbba_ 162 ---NYYKAQTHGKWPVKWYAPECIN----------YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 228 (277)
T ss_dssp ---SEEEC----CCCGGGCCHHHHH----------HCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred ---CCCCCCCCCCCCCEECCCHHHC----------CCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
T ss_conf ---4432244567784203916653----------799984344303403132896589999999899999999982899
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 87899999879999998100184889999999985
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
...+...++.+++||.+||+.||++||++.++++.
T Consensus 229 ~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~ 263 (277)
T d1xbba_ 229 MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 263 (277)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 99986567999999999758897689098999998
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-44 Score=328.56 Aligned_cols=248 Identities=20% Similarity=0.293 Sum_probs=197.9
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. ......+.+.+|.++++.++||||++++++++++...|+|
T Consensus 3 ~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~---~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv 79 (298)
T d1gz8a_ 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT---ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79 (298)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC----------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred CCEECCEEECCCCEEEEEEEECCCCCEEEEEEEEHHH---CCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEE
T ss_conf 9776517723768099999999999799999980222---5758999999999999867998388744533224320378
Q ss_pred ECCCCCCHHHHHC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 0353599888860--99999999999999999999999998898525788996899139929994137632126889999
Q 000410 104 RQYFFNSLRDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~e~~~gsL~d~l~--~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~ 181 (1553)
+||+.+++.+.+. ....+++.+++.++.|++.||+|||++||+||||||+|||++.++.+||+|||.++....+..
T Consensus 80 ~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~-- 157 (298)
T d1gz8a_ 80 FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-- 157 (298)
T ss_dssp EECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB--
T ss_pred EEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCCEECCCCCCEECCCCCC--
T ss_conf 862377445554420256888899999999999999986528899213571140113467621035786134368864--
Q ss_pred CCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH----HHHHCCCCCC
Q ss_conf 996122204898732368410012688632235799998424799999999998099999833799----9982688999
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~----~~~~~~~~~~ 257 (1553)
......|++.|+|||.+.. ...++.++||||+||++|+|++|++||...... .+.+....+.
T Consensus 158 -----~~~~~~gt~~y~apE~~~~---------~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~ 223 (298)
T d1gz8a_ 158 -----TYTHEVVTLWYRAPEILLG---------CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223 (298)
T ss_dssp -----CTTCCBCCCTTCCHHHHTT---------CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred -----CCEEECCCCEEEEHHHHCC---------CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf -----1001036521541122136---------65777422103333134279668799898899999999998328983
Q ss_pred --------------CCC-----------CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf --------------878-----------99999879999998100184889999999985
Q 000410 258 --------------QHL-----------EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 --------------~~~-----------~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
... ....++.+++||.+||+.||++|||++|+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H 283 (298)
T d1gz8a_ 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283 (298)
T ss_dssp TTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 331444222421243454322220444166789999999999763995579189999678
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-44 Score=327.16 Aligned_cols=244 Identities=19% Similarity=0.229 Sum_probs=197.1
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC-----
Q ss_conf 56999885025709999999889--55999999516997478999999999999996189997548879998088-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. ......+.+.+|.++|+.++||||+++++++....
T Consensus 19 ~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~ 95 (346)
T d1cm8a_ 19 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF---QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95 (346)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTT---SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHH---CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
T ss_conf 1899889801778199999999999899999985222---5969999999999999866898754799986357655554
Q ss_pred -EEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCC
Q ss_conf -7999903535998888609999999999999999999999999889852578899689913992999413763212688
Q 000410 99 -AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 99 -~~~LV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~ 177 (1553)
..|+||||+.++|...+... .+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||.++.....
T Consensus 96 ~~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~ 174 (346)
T d1cm8a_ 96 TDFYLVMPFMGTDLGKLMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 174 (346)
T ss_dssp CCCEEEEECCSEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred CEEEEEEECCCCCHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCC
T ss_conf 159999840552189998740-2269999999999999999987378764566851111210012211343102206876
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHH--------
Q ss_conf 999999612220489873236841001268863223579999842479999999999809999983379999--------
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-------- 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~-------- 249 (1553)
.....+++.|+|||.+.+ ...++.++||||+||++|||++|.+||...+....
T Consensus 175 ----------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~ 235 (346)
T d1cm8a_ 175 ----------MTGYVVTRWYRAPEVILN---------WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVT 235 (346)
T ss_dssp ----------CCSSCSCGGGCCTHHHHT---------TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred ----------CCCCCCCCCCCCHHHHCC---------CCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCC
T ss_conf ----------310245533358899817---------8789965010300389999997869988897689999998503
Q ss_pred -------------------HHCCCC----CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf -------------------826889----9987899999879999998100184889999999985
Q 000410 250 -------------------RRGQYD----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 -------------------~~~~~~----~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
...... .........++.+++||.+||+.||++||||.|+|+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~H 301 (346)
T d1cm8a_ 236 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301 (346)
T ss_dssp CCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 788488886530003443311578666556677556899999999999772995579299999639
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-44 Score=324.64 Aligned_cols=246 Identities=20% Similarity=0.269 Sum_probs=191.1
Q ss_pred CCCCCCEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE--
Q ss_conf 9986456999885025709999999889--559999995169974789999999999999961899975488799980--
Q 000410 21 LPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-- 96 (1553)
Q Consensus 21 ~~~~~~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~-- 96 (1553)
-+...+|+..+.||+|+||+||+|++.. ..||+|++.+..... .+|.++++.++||||+++++++..
T Consensus 16 ~~~~~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~---------~~Ei~il~~l~h~niv~~~~~~~~~~ 86 (350)
T d1q5ka_ 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK---------NRELQIMRKLDHCNIVRLRYFFYSSG 86 (350)
T ss_dssp CCEEEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSC---------CHHHHHHHHCCCTTBCCEEEEEEEC-
T ss_pred CCCCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEEEECCCCHHH---------HHHHHHHHHCCCCCCCCEEEEEEECC
T ss_conf 856677675169821768399999999999799999988160689---------99999998668989873878997447
Q ss_pred ----CCEEEEEECCCCCCHHHHH----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCC-CEEEEE
Q ss_conf ----8879999035359988886----0999999999999999999999999988985257889968991399-299941
Q 000410 97 ----DKAAYLLRQYFFNSLRDRL----STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSD 167 (1553)
Q Consensus 97 ----~~~~~LV~e~~~gsL~d~l----~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~-~vkL~D 167 (1553)
....|+|+||+++++++.+ .....+++.+++.++.||+.||+|||++||+||||||+|||++.++ .+||+|
T Consensus 87 ~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~D 166 (350)
T d1q5ka_ 87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 166 (350)
T ss_dssp -CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECC
T ss_pred CCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEC
T ss_conf 65773189999841688607888863103689999999999999999999998668764578860378735897116733
Q ss_pred CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 37632126889999996122204898732368410012688632235799998424799999999998099999833799
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL 247 (1553)
Q Consensus 168 Fg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~ 247 (1553)
||+++...... ...+..|++.|+|||.+.. ...++.++||||+||++|||++|.+||......
T Consensus 167 FG~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~ 229 (350)
T d1q5ka_ 167 FGSAKQLVRGE--------PNVSYICSRYYRAPELIFG---------ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 229 (350)
T ss_dssp CTTCEECCTTS--------CCCSCCSCTTSCCHHHHTT---------CSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH
T ss_pred CCCHHHCCCCC--------CCCCCCCCCCCCCHHHHHC---------CCCCCCCEEECCCCEEEEEHHHCCCCCCCCCHH
T ss_conf 66054404776--------5320025555568277640---------468882100024652778550287998987999
Q ss_pred ----HHHH-------------------CCCCCC------CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf ----9982-------------------688999------87899999879999998100184889999999985
Q 000410 248 ----AYRR-------------------GQYDPS------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 248 ----~~~~-------------------~~~~~~------~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.+.+ ..+... .......++.+++||.+||+.||++||||.|+|+|
T Consensus 230 ~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 303 (350)
T d1q5ka_ 230 DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303 (350)
T ss_dssp HHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 99999999748981776543062101103554456744443156899999999999765895579299999669
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-45 Score=329.73 Aligned_cols=251 Identities=14% Similarity=0.073 Sum_probs=199.3
Q ss_pred CEEEEEEEECCCCEEEEEEEECC------CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCE
Q ss_conf 56999885025709999999889------559999995169974789999999999999961899975488799980887
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~------~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~ 99 (1553)
.|+..+.||+|+||.||+|.+.. ..||||++.... .......+.+|..+++.++||||+++++++.+...
T Consensus 8 ~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~ 83 (283)
T d1mqba_ 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY----TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKP 83 (283)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC----CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HEEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEECCCC----CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC
T ss_conf 96861598117790999999968998787999999988445----96899999999999985689878323677833880
Q ss_pred EEEEECCCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCC
Q ss_conf 999903535-998888609-999999999999999999999999889852578899689913992999413763212688
Q 000410 100 AYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~LV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~ 177 (1553)
.|+|+||+. +++.+.+.. .+.+++.++..++.|++.||+|||+++|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~ 163 (283)
T d1mqba_ 84 MMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 163 (283)
T ss_dssp EEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCEEEECCCCHHHCCCCC
T ss_conf 38999721357402221023454208999999999998541212123425765644278889984998455103003578
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCHHHHHHHHCCCC-
Q ss_conf 999999612220489873236841001268863223579999842479999999999809-999983379999826889-
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYD- 255 (1553)
Q Consensus 178 ~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~~~f~~~~~~~~~~~~~~- 255 (1553)
. ...+......|++.|+|||.+. ...++.++||||+||++|||+++ .++|.........+....
T Consensus 164 ~----~~~~~~~~~~gt~~Y~APE~l~----------~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~ 229 (283)
T d1mqba_ 164 P----EATYTTSGGKIPIRWTAPEAIS----------YRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG 229 (283)
T ss_dssp --------------CCCGGGSCHHHHH----------SCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT
T ss_pred C----CCCEEECCCCCCCCCCCHHHHC----------CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
T ss_conf 7----6526742677773434888870----------4999973556344898999996798865568999999998635
Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 998789999987999999810018488999999998520
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 256 ~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
.....+...++.+++||.+||+.||++||++.|+++.+.
T Consensus 230 ~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~ 268 (283)
T d1mqba_ 230 FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 268 (283)
T ss_dssp CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 789985045799999999977679768939999999999
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-45 Score=331.31 Aligned_cols=247 Identities=15% Similarity=0.135 Sum_probs=195.8
Q ss_pred CEEEEEEEECCCCEEEEEEEECC-C-----EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCE
Q ss_conf 56999885025709999999889-5-----59999995169974789999999999999961899975488799980887
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-G-----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~-~-----~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~ 99 (1553)
+|++.+.||+|+||+||+|++.. + .||+|.+... ......+.+.+|.++++.++||||+++++++.++.
T Consensus 10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~- 84 (317)
T d1xkka_ 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICLTST- 84 (317)
T ss_dssp TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC--------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEEEECCC----CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-
T ss_conf 9978319820899299999995899889899999996513----49799999999999998679988815899996198-
Q ss_pred EEEEECCCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCC
Q ss_conf 999903535-998888609-999999999999999999999999889852578899689913992999413763212688
Q 000410 100 AYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~LV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~ 177 (1553)
.++++|++. ++|.+.+.. ...+++.+++.|+.|++.||.|||++||+||||||+|||+++++.+||+|||+++.....
T Consensus 85 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~ 164 (317)
T d1xkka_ 85 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEECCCCCEEEECCCCCEECCCC
T ss_conf 36999842687401011133457999999999999999999998769504762120311679987586025522233544
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCH---HHHHHHHCC
Q ss_conf 99999961222048987323684100126886322357999984247999999999980-99999833---799998268
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELS---HLLAYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g~~~f~~~---~~~~~~~~~ 253 (1553)
. .........|++.|+|||.+. .+.++.++||||+||++|||++ |.+||... ++.......
T Consensus 165 ~-----~~~~~~~~~gt~~y~APE~l~----------~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~ 229 (317)
T d1xkka_ 165 E-----KEYHAEGGKVPIKWMALESIL----------HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG 229 (317)
T ss_dssp C-----C--------CCTTTSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHT
T ss_pred C-----CCCCCCCCCCCCCCCCHHHHH----------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
T ss_conf 4-----532236510586446708874----------6999835654407999999997799999999989999999759
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 89998789999987999999810018488999999998520
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 254 ~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
.. ...+...++.+++||.+||+.||++|||+.|+++++.
T Consensus 230 ~~--~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~ 268 (317)
T d1xkka_ 230 ER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268 (317)
T ss_dssp CC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 98--9998556899999999847899346919999999999
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-45 Score=329.80 Aligned_cols=247 Identities=13% Similarity=0.103 Sum_probs=202.6
Q ss_pred CEEEEEEEECCCCEEEEEEEECCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEE
Q ss_conf 569998850257099999998895-5999999516997478999999999999996189997548879998088799990
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~-~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV~ 104 (1553)
+|++.+.||+|+||.||+|+++++ .||||++.+.. .. .+.+.+|..+++.++||||+++++++.++...|+|+
T Consensus 5 ~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~--~~----~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~ 78 (258)
T d1k2pa_ 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 78 (258)
T ss_dssp CCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS--SC----HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEE
T ss_pred HCEEEEEEECCCCEEEEEEEECCCCEEEEEEECCCC--CC----HHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEE
T ss_conf 979968982078839999998899899999987475--77----899999999999668986015889985078169999
Q ss_pred CCCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 3535-998888609-99999999999999999999999988985257889968991399299941376321268899999
Q 000410 105 QYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
||+. |+|.+++.. ...+++..+..++.|++.||+|||++||+||||||+|||++..+.+||+|||+++.......
T Consensus 79 Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~--- 155 (258)
T d1k2pa_ 79 EYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY--- 155 (258)
T ss_dssp ECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC---
T ss_pred ECCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCHHHEECCCCCC---
T ss_conf 70489938886410246776899999999999999987546843466541358876998479886144202357872---
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCHHHHHHHHCCCC-CCCCC
Q ss_conf 961222048987323684100126886322357999984247999999999980-9999983379999826889-99878
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYD-PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g~~~f~~~~~~~~~~~~~~-~~~~~ 260 (1553)
.......++..|+|||.+. ...++.++||||+||++|||++ |++||.............. .....
T Consensus 156 ---~~~~~~~~t~~y~aPE~~~----------~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~ 222 (258)
T d1k2pa_ 156 ---TSSVGSKFPVRWSPPEVLM----------YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 222 (258)
T ss_dssp ---CCCCCSCCCGGGCCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCC
T ss_pred ---EEECCCCCCCCCCCCHHHC----------CCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
T ss_conf ---2524657887757807863----------799885210336432467397559999889999999999980797899
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9999987999999810018488999999998520
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 261 ~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
+...++.+++||.+||+.||++|||++++++|+.
T Consensus 223 p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~ 256 (258)
T d1k2pa_ 223 PHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 256 (258)
T ss_dssp CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 6546599999999976689768939999998741
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-44 Score=326.16 Aligned_cols=253 Identities=21% Similarity=0.246 Sum_probs=198.1
Q ss_pred CCCCCCCEEEEEEEECCCCEEEEEEEEC--CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEC
Q ss_conf 6998645699988502570999999988--95599999951699747899999999999999618999754887999808
Q 000410 20 DLPSSYNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 20 ~~~~~~~y~~~~~LG~G~f~~V~~a~~~--~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~ 97 (1553)
++.+ +|++.+.||+|+||+||+|++. +..||||++.+. ......+.+.+|.++|+.++||||+++++++..+
T Consensus 5 ~i~~--rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~----~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~ 78 (345)
T d1pmea_ 5 DVGP--RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPF----EHQTYCQRTLREIKILLRFRHENIIGINDIIRAP 78 (345)
T ss_dssp CCCT--TEEEEEECC---CCCEEEEEETTTCSEEEEEEECCT----TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCS
T ss_pred CCCC--CEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHH----CCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC
T ss_conf 7389--859978994064809999999999949999998031----0958999999999999976898988588899505
Q ss_pred C-----EEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCC
Q ss_conf 8-----79999035359988886099999999999999999999999998898525788996899139929994137632
Q 000410 98 K-----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 98 ~-----~~~LV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k 172 (1553)
. ..|++++++.|+|++++..++ +++.+++.++.|++.||+|||++||+||||||+|||++..+.+||+|||.++
T Consensus 79 ~~~~~~~~~l~~~~~~g~L~~~l~~~~-l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~ 157 (345)
T d1pmea_ 79 TIEQMKDVYLVTHLMGADLYKLLKTQH-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 157 (345)
T ss_dssp STTTCCCEEEEEECCCEEHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CCCCCCEEEEEEEECCCCHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEE
T ss_conf 645541499999625986566440589-9999999999999999999997898677787643788799977875457056
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH--
Q ss_conf 126889999996122204898732368410012688632235799998424799999999998099999833799998--
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR-- 250 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~-- 250 (1553)
........ ........+++.|+|||.+.. ...++.++||||+||++|||++|.+||.........
T Consensus 158 ~~~~~~~~----~~~~~~~~gt~~y~aPE~l~~---------~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~ 224 (345)
T d1pmea_ 158 VADPDHDH----TGFLTEYVATRWYRAPEIMLN---------SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 224 (345)
T ss_dssp ECCGGGCB----CCTTCCCCSCGGGCCGGGTTT---------BCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred ECCCCCCC----CEEECCCCCCCEECHHHHHHC---------CCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCHHHHHHH
T ss_conf 50477764----101011026520003878604---------78887410100467013377669799788888999998
Q ss_pred --H-----------------------CCCC--CC--CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf --2-----------------------6889--99--87899999879999998100184889999999985
Q 000410 251 --R-----------------------GQYD--PS--QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 --~-----------------------~~~~--~~--~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
. .... .. .......++.+++||.+||+.||.+||||+|+|+|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~h 295 (345)
T d1pmea_ 225 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295 (345)
T ss_dssp HHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 76520699756642343322220244677557787778378999999999999764895679089998619
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.4e-44 Score=323.28 Aligned_cols=248 Identities=22% Similarity=0.255 Sum_probs=188.3
Q ss_pred CEEEEEEEECCCCEEEEEEEEC--CC-EEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE-----
Q ss_conf 5699988502570999999988--95-5999999516997-4789999999999999961899975488799980-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EG-LVLVKVYFKRGDY-IDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~--~~-~vavKv~~k~~~~-~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~----- 96 (1553)
+|++.+.||+|+||+||+|++. ++ .||+|++.+.... .......+++ .+.+.++..+||||+++++++..
T Consensus 8 ~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~-~~l~~l~~~~HpnIv~~~~~~~~~~~~~ 86 (305)
T d1blxa_ 8 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AVLRHLETFEHPNVVRLFDVCTVSRTDR 86 (305)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHH-HHHHHHHHTCCTTBCCEEEEEEEEECSS
T ss_pred CEEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEHHHCCCHHHHHHHHHH-HHHHHHHHCCCCCCCEEEEEECCCCCCC
T ss_conf 979888992155869999999888998999999802324516799999999-9999874258988023663221466666
Q ss_pred CCEEEEEECCCCCCHHHHH--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCC
Q ss_conf 8879999035359988886--09999999999999999999999999889852578899689913992999413763212
Q 000410 97 DKAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 ~~~~~LV~e~~~gsL~d~l--~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~ 174 (1553)
+...|+++||+.+.+.... .....+++.+++.++.|++.||+|||++||+||||||+|||++..+.+||+|||.++..
T Consensus 87 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~ 166 (305)
T d1blxa_ 87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 166 (305)
T ss_dssp EEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred CCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCCCEEECCHHHHHHH
T ss_conf 74699999740587144444303789998999999999999999997588983579862789858997542100010110
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH----HHH
Q ss_conf 6889999996122204898732368410012688632235799998424799999999998099999833799----998
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYR 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~----~~~ 250 (1553)
.. .....+..||+.|+|||.+. ...|+.++||||+||++|||++|.+||...... .+.
T Consensus 167 ~~--------~~~~~~~~gT~~Y~APE~~~----------~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~ 228 (305)
T d1blxa_ 167 SF--------QMALTSVVVTLWYRAPEVLL----------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 228 (305)
T ss_dssp CG--------GGGGCCCCCCCTTCCHHHHT----------TCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred CC--------CCCCCCCCCCHHHCCCCHHC----------CCCCCHHEHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 02--------34577765485114831001----------7988811100032899999987879989989899999999
Q ss_pred HCC-------C----------------CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 268-------8----------------99987899999879999998100184889999999985
Q 000410 251 RGQ-------Y----------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~-------~----------------~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
... + .+...+....++.+++||.+||+.||++||||.|+|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~H 293 (305)
T d1blxa_ 229 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293 (305)
T ss_dssp HHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHCCCCHHCCCCCCCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 84079961105321111033302234564544044589999999999874896679189999669
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.8e-44 Score=327.22 Aligned_cols=248 Identities=20% Similarity=0.237 Sum_probs=199.0
Q ss_pred CEEEEEEEECCCCEEEEEEEECCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEEE
Q ss_conf 569998850257099999998895-5999999516997478999999999999996189997548879998088799990
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~-~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV~ 104 (1553)
+|++.+.||+|+||+||+|+++.+ .||+|++.+... .....+.+.+|..+++.++||||+++++++..+...|+++
T Consensus 3 ~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~ 79 (286)
T d1ob3a_ 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE---DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (286)
T ss_dssp SEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG---GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CCEECCEEECCCCCEEEEEEECCCCEEEEEEEEHHHC---CHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEE
T ss_conf 9634318722778189999968999999999812326---8589999999999998679986876601204677315899
Q ss_pred CCCCCC-HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 353599-8888609999999999999999999999999889852578899689913992999413763212688999999
Q 000410 105 QYFFNS-LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 e~~~gs-L~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~~ 183 (1553)
|++.+. +......++.+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||.+.....+...
T Consensus 80 e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~--- 156 (286)
T d1ob3a_ 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK--- 156 (286)
T ss_dssp ECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------
T ss_pred EEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCEEECCCCCCEECCCCCCC---
T ss_conf 74004567899860477514456899999999999860574882678775056868997873236643011467654---
Q ss_pred CCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH----HHHHHCCCCC---
Q ss_conf 612220489873236841001268863223579999842479999999999809999983379----9998268899---
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDP--- 256 (1553)
Q Consensus 184 ~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~----~~~~~~~~~~--- 256 (1553)
.....+++.|+|||.+.. ...++.++||||+||++|||++|++||..... ..+......+
T Consensus 157 ----~~~~~~~~~y~~pE~~~~---------~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~ 223 (286)
T d1ob3a_ 157 ----YTHEIVTLWYRAPDVLMG---------SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223 (286)
T ss_dssp ---------CCCTTCCHHHHTT---------CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred ----CCEECCCCHHHHHHHHHC---------CCCCCCCEEEHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHH
T ss_conf ----101024311013788717---------8888841002111758999977979989889899999999863899711
Q ss_pred ----------------------CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf ----------------------987899999879999998100184889999999985
Q 000410 257 ----------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ----------------------~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
........++.+++||.+||+.||++|||++|+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~H 281 (286)
T d1ob3a_ 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (286)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HCCCHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 0421233322143333356764666512589999999999866896689099998569
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=332.69 Aligned_cols=243 Identities=21% Similarity=0.151 Sum_probs=196.2
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHCCC--CCCEEEEEEEEEECCEE
Q ss_conf 56999885025709999999889--55999999516997-478999999999999996189--99754887999808879
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDY-IDLREYERRLFHIRETFRSID--HPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~-~~~~~~~~~l~~e~~~l~~l~--hpnIl~~~~~~~~~~~~ 100 (1553)
+|++++.||+|+||.||+|++.. ..||+|++.+.... ........++.+|..+++.++ ||||+++++++++++..
T Consensus 5 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~ 84 (273)
T d1xwsa_ 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSF 84 (273)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEE
T ss_pred EEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCEE
T ss_conf 37996798408783999999999997999999856884433455679999999999997435898812799998309968
Q ss_pred EEEECCCCC--CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECC-CCEEEEECCCCCCCCCC
Q ss_conf 999035359--988886099999999999999999999999998898525788996899139-92999413763212688
Q 000410 101 YLLRQYFFN--SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 101 ~LV~e~~~g--sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~-~~vkL~DFg~~k~~~~~ 177 (1553)
|+|+||+.+ ++.+.+..+..+++.+++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||.++.....
T Consensus 85 ~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~ 164 (273)
T d1xwsa_ 85 VLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164 (273)
T ss_dssp EEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred EEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEECCCCCCEECCCC
T ss_conf 99998336862289998615899999999999999999999987797556676111477447884897754653532444
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 99999961222048987323684100126886322357999984247999999999980999998337999982688999
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPS 257 (1553)
Q Consensus 178 ~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~ 257 (1553)
...+..||+.|+|||.+... ..++.++||||+||++|||++|.+||...+. ..++...
T Consensus 165 ---------~~~~~~GT~~y~aPE~~~~~---------~~~~~~~DiwSlGvilyell~g~~Pf~~~~~--i~~~~~~-- 222 (273)
T d1xwsa_ 165 ---------VYTDFDGTRVYSPPEWIRYH---------RYHGRSAAVWSLGILLYDMVCGDIPFEHDEE--IIRGQVF-- 222 (273)
T ss_dssp ---------CBCCCCSCGGGSCHHHHHHS---------CBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH--HHHCCCC--
T ss_pred ---------CCCCCCCCCCCCCHHHHCCC---------CCCCCCCCCCCCEEEEHHHHHCCCCCCCCHH--HHHCCCC--
T ss_conf ---------55665658774799998489---------9788653325540345367568899887367--7615447--
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 87899999879999998100184889999999985
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
++...++++++||.+||+.||++|||++|+|+|
T Consensus 223 --~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~h 255 (273)
T d1xwsa_ 223 --FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 255 (273)
T ss_dssp --CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf --787799999999999760897589399998539
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-44 Score=327.71 Aligned_cols=251 Identities=17% Similarity=0.145 Sum_probs=203.4
Q ss_pred CEEEEEEEECCCCEEEEEEEECC-------CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
Q ss_conf 56999885025709999999889-------55999999516997478999999999999996189997548879998088
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~-------~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||+||+|++.+ ..||||++.+. ......+.+.+|.++++.++||||+++++++.+..
T Consensus 14 ~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~----~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~ 89 (301)
T d1lufa_ 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE----ASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 89 (301)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT----CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred HCEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECHH----CCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC
T ss_conf 93886798207883999999888765778829999998821----08579999999999999668997655246660598
Q ss_pred EEEEEECCCC-CCHHHHHCCC------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCC
Q ss_conf 7999903535-9988886099------------------------99999999999999999999999889852578899
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 153 (1553)
Q Consensus 99 ~~~LV~e~~~-gsL~d~l~~~------------------------~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpe 153 (1553)
..++++||+. |+|.+++... ..+++.++..|+.|++.||+|||+++|+||||||+
T Consensus 90 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~ 169 (301)
T d1lufa_ 90 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATR 169 (301)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred CEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf 03899981589929999985275542100001110012103467889899999999999999855413578685488401
Q ss_pred CEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 68991399299941376321268899999961222048987323684100126886322357999984247999999999
Q 000410 154 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233 (1553)
Q Consensus 154 NILi~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~e 233 (1553)
|||++.++.+||+|||+++..... .......+..+++.|+|||.+. ...++.++||||+||++||
T Consensus 170 NILld~~~~~Kl~DFGls~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~----------~~~~t~ksDVwS~Gvvl~e 234 (301)
T d1lufa_ 170 NCLVGENMVVKIADFGLSRNIYSA-----DYYKADGNDAIPIRWMPPESIF----------YNRYTTESDVWAYGVVLWE 234 (301)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGG-----GCBC----CCBCGGGCCHHHHH----------HCCCCHHHHHHHHHHHHHH
T ss_pred CEEECCCCCEEECCCHHHEECCCC-----CCCCCCCCCCCCCCCCCHHHHC----------CCCCCHHHHHCCCHHHHHH
T ss_conf 168989992898331442113677-----6411157777676767989972----------6889805630252362999
Q ss_pred HHCC-CCCCCCHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
Q ss_conf 9809-999983379999826889-9987899999879999998100184889999999985201
Q 000410 234 LFLE-VPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 234 Lltg-~~~f~~~~~~~~~~~~~~-~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~~ 295 (1553)
|+++ .+||......+....... .....+...++.+.+||.+||+.||++|||+.|+++.++.
T Consensus 235 ll~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~ 298 (301)
T d1lufa_ 235 IFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 298 (301)
T ss_dssp HHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
T ss_conf 9806899999989999999997399788873252999999999748896579399999999998
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-44 Score=325.66 Aligned_cols=247 Identities=15% Similarity=0.122 Sum_probs=200.2
Q ss_pred CEEEEEEEECCCCEEEEEEEECC-C---EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC-CCCCEEEEEEEEEECCEE
Q ss_conf 56999885025709999999889-5---599999951699747899999999999999618-999754887999808879
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~-~---~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIl~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|++.+ + .||||.+.+. ......+.+.+|.++++.+ +||||+++++++.++...
T Consensus 11 ~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~ 86 (309)
T d1fvra_ 11 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 86 (309)
T ss_dssp GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC----------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEE
T ss_pred HCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEECCC----CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEE
T ss_conf 96887798207882899999989996999999997823----38579999999999998622899883678888418736
Q ss_pred EEEECCCC-CCHHHHHCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCE
Q ss_conf 99903535-9988886099----------------999999999999999999999998898525788996899139929
Q 000410 101 YLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 101 ~LV~e~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~v 163 (1553)
|+|+||++ |+|.+++..+ ..+++.++..++.|++.||.|+|+++|+||||||+|||++.++.+
T Consensus 87 ~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~ 166 (309)
T d1fvra_ 87 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 166 (309)
T ss_dssp EEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCE
T ss_pred EEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCE
T ss_conf 99998028986999986403555551231012345789999999999999999876630895455505204898688763
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCC
Q ss_conf 99413763212688999999612220489873236841001268863223579999842479999999999809-99998
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFE 242 (1553)
Q Consensus 164 kL~DFg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~~~f~ 242 (1553)
||+|||.++....... .....++..|+|||.+. ...++.++||||+||++|||++| .+||.
T Consensus 167 kl~DfG~a~~~~~~~~--------~~~~~gt~~y~aPE~l~----------~~~~~~~sDvwSfGvil~ell~~~~~p~~ 228 (309)
T d1fvra_ 167 KIADFGLSRGQEVYVK--------KTMGRLPVRWMAIESLN----------YSVYTTNSDVWSYGVLLWEIVSLGGTPYC 228 (309)
T ss_dssp EECCTTCEESSCEECC--------C----CCTTTCCHHHHH----------HCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred EECCCCCCCCCCCCCC--------CCCEECCCCCCCHHHHC----------CCCCCCCCEEEHHHHHHHHHHHCCCCCCC
T ss_conf 8743443224442234--------55301377555538752----------69999622153138899999836899999
Q ss_pred CHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 3379999826889-998789999987999999810018488999999998520
Q 000410 243 LSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 243 ~~~~~~~~~~~~~-~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
............. .....+...++.+++||.+||+.||++||++.|+++++.
T Consensus 229 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~ 281 (309)
T d1fvra_ 229 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281 (309)
T ss_dssp TCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99999999999826888887667899999999976789668949999999999
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-43 Score=318.99 Aligned_cols=266 Identities=14% Similarity=0.136 Sum_probs=208.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECC-------CEEEEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 66575565322223469986456999885025709999999889-------55999999516997478999999999999
Q 000410 5 IAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRE 77 (1553)
Q Consensus 5 ~s~~~~~~~~~~y~~~~~~~~~y~~~~~LG~G~f~~V~~a~~~~-------~~vavKv~~k~~~~~~~~~~~~~l~~e~~ 77 (1553)
.+.|+|.+.-..+. ++.. +|++.+.||+|+||.||+|++.. ..||||++.+.. .......+.+|..
T Consensus 6 ~~~~~~~~~~~~~~--~~~~-~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~----~~~~~~~~~~E~~ 78 (311)
T d1t46a_ 6 YIDPTQLPYDHKWE--FPRN-RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA----HLTEREALMSELK 78 (311)
T ss_dssp CCCTTTSCCCGGGB--CCGG-GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC----CHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCCC--CCHH-HEEEEEEEEECCCEEEEEEEEECCCCCCCCEEEEEEEECCCC----CHHHHHHHHHHHH
T ss_conf 52854489840263--7789-969854982068829999998066447788699999987424----8779999999999
Q ss_pred HHHCC-CCCCEEEEEEEEEECCEEEEEECCCC-CCHHHHHCCC------------------CCCCHHHHHHHHHHHHHHH
Q ss_conf 99618-99975488799980887999903535-9988886099------------------9999999999999999999
Q 000410 78 TFRSI-DHPHVWAFQFWQETDKAAYLLRQYFF-NSLRDRLSTP------------------PFLSLVEKKWLAFQLLLAV 137 (1553)
Q Consensus 78 ~l~~l-~hpnIl~~~~~~~~~~~~~LV~e~~~-gsL~d~l~~~------------------~~l~~~~~~~i~~Qil~aL 137 (1553)
+++.+ +||||+++++++++....|+++|||+ |+|.+++... ..+++.+++.|+.||+.||
T Consensus 79 ~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl 158 (311)
T d1t46a_ 79 VLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158 (311)
T ss_dssp HHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHH
T ss_pred HHHHCCCCCCEEEEEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 98762699988789989831997899997379987999998535665444445332223345889999999999999999
Q ss_pred HHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCC
Q ss_conf 99998898525788996899139929994137632126889999996122204898732368410012688632235799
Q 000410 138 KQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP 217 (1553)
Q Consensus 138 ~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~ 217 (1553)
+|||+++++||||||+|||++..+.++++|||.++...... .....+...+++.|+|||.+. ...
T Consensus 159 ~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~----------~~~ 223 (311)
T d1t46a_ 159 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-----NYVVKGNARLPVKWMAPESIF----------NCV 223 (311)
T ss_dssp HHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT-----TSEECSSSEECGGGCCHHHHH----------HCC
T ss_pred HHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCHHEECCCCC-----CCEEEEECCCCHHHCCHHHHC----------CCC
T ss_conf 98875792666241021000025752102340102336788-----615862013596876778861----------799
Q ss_pred CCCCCCHHHHHHHHHHHHC-CCCCCCCH----HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9984247999999999980-99999833----799998268899987899999879999998100184889999999985
Q 000410 218 LKPSMDIFAVGCVIAELFL-EVPFFELS----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 218 ~t~~~DIwSlG~vl~eLlt-g~~~f~~~----~~~~~~~~~~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
++.++||||+||++|||++ |.|+|... .+.++......+. .+...++.+.+||.+||+.||++|||+.|+++.
T Consensus 224 ~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~ 301 (311)
T d1t46a_ 224 YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC--CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 997400102589999998589988778998999999986689889--854365999999999757796579299999999
Q ss_pred HH
Q ss_conf 20
Q 000410 293 YA 294 (1553)
Q Consensus 293 ~~ 294 (1553)
+.
T Consensus 302 L~ 303 (311)
T d1t46a_ 302 IE 303 (311)
T ss_dssp HH
T ss_pred HH
T ss_conf 98
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-44 Score=323.94 Aligned_cols=251 Identities=16% Similarity=0.132 Sum_probs=199.5
Q ss_pred CCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCC-EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 3222234699864569998850257099999998895-599999951699747899999999999999618999754887
Q 000410 13 ATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQ 91 (1553)
Q Consensus 13 ~~~~y~~~~~~~~~y~~~~~LG~G~f~~V~~a~~~~~-~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~ 91 (1553)
+.+.+..+.. +|++.+.||+|+||+||+|++.++ .||+|++.+.. .. .+.+.+|..+++.++||||++++
T Consensus 8 ~~~~~~i~~~---~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~--~~----~~~~~~E~~~l~~l~h~nIv~~~ 78 (285)
T d1fmka3 8 AKDAWEIPRE---SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MS----PEAFLQEAQVMKKLRHEKLVQLY 78 (285)
T ss_dssp STTCSBCCGG---GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SC----HHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCCCEECCHH---HEEEEEEEEECCCEEEEEEEECCCCEEEEEEECCCC--CC----HHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 8756074779---979846993079809999999999999999988044--88----89999999999866667886899
Q ss_pred EEEEECCEEEEEECCCC-CCHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEEC
Q ss_conf 99980887999903535-998888609--999999999999999999999999889852578899689913992999413
Q 000410 92 FWQETDKAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 92 ~~~~~~~~~~LV~e~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DF 168 (1553)
+++. ++..|+|+||+. |+|.+++.. .+.+++.+++.|+.|++.||+|||++||+||||||+|||++.++.+||+||
T Consensus 79 g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~Df 157 (285)
T d1fmka3 79 AVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 157 (285)
T ss_dssp EEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEEE-CCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEECCC
T ss_conf 9982-397599999447994354200003553059999999999999999875411433531230799989992998442
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCHHHH
Q ss_conf 763212688999999612220489873236841001268863223579999842479999999999809-9999833799
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLL 247 (1553)
Q Consensus 169 g~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~~~f~~~~~~ 247 (1553)
|+++...... ........+++.|+|||.+. ...++.++||||+||++|||++| .|+|......
T Consensus 158 Gla~~~~~~~------~~~~~~~~gt~~y~aPE~~~----------~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~ 221 (285)
T d1fmka3 158 GLARLIEDNE------YTARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR 221 (285)
T ss_dssp CTTC--------------------CCGGGSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred CHHHHCCCCC------CEEECCCCCCCCCCCHHHHH----------CCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHH
T ss_conf 5554256887------33524545566545808983----------7998917741323589999986899999888899
Q ss_pred H----HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9----98268899987899999879999998100184889999999985
Q 000410 248 A----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 248 ~----~~~~~~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
. +.++. . ...+...++.++++|.+||+.||++||+++++++.
T Consensus 222 ~~~~~i~~~~-~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 267 (285)
T d1fmka3 222 EVLDQVERGY-R--MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 267 (285)
T ss_dssp HHHHHHHTTC-C--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHCC-C--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 9999998268-9--99983237999999999756697589199999998
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.2e-44 Score=324.57 Aligned_cols=252 Identities=19% Similarity=0.278 Sum_probs=194.7
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE-------
Q ss_conf 56999885025709999999889--559999995169974789999999999999961899975488799980-------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET------- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~------- 96 (1553)
+|++.+.||+|+||+||+|++.. ..||||++.+.... ......+.+|.++++.++||||+++++++..
T Consensus 11 rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~---~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~ 87 (318)
T d3blha1 11 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 87 (318)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT---TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCC---HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC
T ss_conf 988999972274829999999899979999998422246---37899999999999983599966067654024654444
Q ss_pred -CCEEEEEECCCCCCHHH-HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCC
Q ss_conf -88799990353599888-8609999999999999999999999999889852578899689913992999413763212
Q 000410 97 -DKAAYLLRQYFFNSLRD-RLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 -~~~~~LV~e~~~gsL~d-~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~ 174 (1553)
+...|+++||+.+.+.. .......+++.+.+.++.|++.||.|||++||+||||||+|||++.++.++|+|||.++..
T Consensus 88 ~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~ 167 (318)
T d3blha1 88 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF 167 (318)
T ss_dssp ---CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCCEEEEEEECCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECCCCCEEEEECCEEEEC
T ss_conf 57638999853578741012220344330899999999999998852299885676722203668996876313500223
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH----HH
Q ss_conf 68899999961222048987323684100126886322357999984247999999999980999998337999----98
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YR 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~----~~ 250 (1553)
...... ......+..||+.|+|||.+.. ...++.++||||+||++|||++|++||....... +.
T Consensus 168 ~~~~~~---~~~~~~~~~gT~~Y~aPE~~~~---------~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~ 235 (318)
T d3blha1 168 SLAKNS---QPNRYTNRVVTLWYRPPELLLG---------ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALIS 235 (318)
T ss_dssp CC--------CCCCCSCCSCGGGCCHHHHTT---------CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred CCCCCC---CCCCCCCEECCHHHHHHHHHCC---------CCCCCCHHHCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHH
T ss_conf 554443---2113566024978742899707---------9998917870067864661744879989989999999999
Q ss_pred H--CCCCCCC--CCC------------------------CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 2--6889998--789------------------------9999879999998100184889999999985
Q 000410 251 R--GQYDPSQ--HLE------------------------KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~--~~~~~~~--~~~------------------------~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
+ +...... ... ...++.+++||.+||+.||++|+||+|+|+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~H 305 (318)
T d3blha1 236 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305 (318)
T ss_dssp HHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 8418998255344320344433201334455503340444599899999999873896589099999749
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-44 Score=323.51 Aligned_cols=245 Identities=18% Similarity=0.192 Sum_probs=196.5
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--C---EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEE
Q ss_conf 56999885025709999999889--5---599999951699747899999999999999618999754887999808879
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~---~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|++.. + .||+|++... ......+.+.+|.++++.++||||+++++++. +...
T Consensus 8 ~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 82 (273)
T d1mp8a_ 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC----TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 82 (273)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT----TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred HEEEEEEEEECCCCEEEEEEEECCCCEEEEEEEEEECCC----CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE-CCEE
T ss_conf 969877993078829999999369964499999993656----68799999999999998689999856988995-3747
Q ss_pred EEEECCCC-CCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf 99903535-998888609-9999999999999999999999998898525788996899139929994137632126889
Q 000410 101 YLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~LV~e~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~ 178 (1553)
|+|+||+. |+|.+++.. +..+++.+++.++.||+.||.|||+++|+||||||+||++++.+.+||+|||.++......
T Consensus 83 ~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~ 162 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 162 (273)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHEEECCCCCEEECCCHHHEECCCCC
T ss_conf 99998406980776542247899999999999999877523022674414102655320678967876503421336776
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCHHH----HHHHHCC
Q ss_conf 9999961222048987323684100126886322357999984247999999999980-9999983379----9998268
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL----LAYRRGQ 253 (1553)
Q Consensus 179 ~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g~~~f~~~~~----~~~~~~~ 253 (1553)
........+++.|+|||.+. ...++.++||||+||++|||++ |.+||..... ..+..+.
T Consensus 163 ------~~~~~~~~gt~~y~apE~l~----------~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~ 226 (273)
T d1mp8a_ 163 ------YYKASKGKLPIKWMAPESIN----------FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 226 (273)
T ss_dssp --------------CCGGGCCHHHHH----------HCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTC
T ss_pred ------CEECCCEECCCCCCHHHHHC----------CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCC
T ss_conf ------23305400583103266751----------69988745244424789999826999988899999999998189
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 89998789999987999999810018488999999998520
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 254 ~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
.. ..+...++.+++||.+||..||++|||+.|+++++.
T Consensus 227 ~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~ 264 (273)
T d1mp8a_ 227 RL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264 (273)
T ss_dssp CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC---CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 99---898777999999999976879768929999999999
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-42 Score=314.69 Aligned_cols=248 Identities=21% Similarity=0.230 Sum_probs=199.0
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+... .......+.+|..+++.++||||+++++++.+....+++
T Consensus 3 ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv 79 (292)
T d1unla_ 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD---DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS---STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC---CHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEE
T ss_conf 97862697128681999999999996999999803217---868999999999999856757888213544444311588
Q ss_pred ECCCCC-CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 035359-9888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~g-sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
++++.+ +|...+...+.+++.+++.++.|++.||+|||++||+||||||+|||++..+.+||+|||.++....+...
T Consensus 80 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~-- 157 (292)
T d1unla_ 80 FEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC-- 157 (292)
T ss_dssp EECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC--
T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCCCC--
T ss_conf 630233222112123565403678999999999987743399860014676121133782665204601104688751--
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCHHHHH----HHHCCCC--
Q ss_conf 9612220489873236841001268863223579999842479999999999809-99998337999----9826889--
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLA----YRRGQYD-- 255 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~~~f~~~~~~~----~~~~~~~-- 255 (1553)
.....++..|+|||.+.. ...++.++||||+||++|||++| .|+|....... +......
T Consensus 158 -----~~~~~~~~~~~~pe~~~~---------~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (292)
T d1unla_ 158 -----YSAEVVTLWYRPPDVLFG---------AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223 (292)
T ss_dssp -----CCSCCSCGGGCCHHHHTT---------CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred -----CEEECCCCCHHHHHHHCC---------CCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf -----001034431014667506---------988880444026541889985189999889999999999986118997
Q ss_pred -----------------------CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf -----------------------9987899999879999998100184889999999985
Q 000410 256 -----------------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 -----------------------~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.........++.+++||.+||+.||.+||||+|+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~H 283 (292)
T d1unla_ 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp TTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 355134432221133444544310433065689999999999864996689099999649
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-43 Score=320.75 Aligned_cols=248 Identities=17% Similarity=0.185 Sum_probs=192.3
Q ss_pred CEEEEEEEECCCCEEEEEEEECC-------CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCCCCEEEEEEEEEE-
Q ss_conf 56999885025709999999889-------559999995169974789999999999999961-899975488799980-
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQET- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~-------~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIl~~~~~~~~- 96 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.... .... .+.+..+...+.. .+|+||+.+++++..
T Consensus 14 ~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~---~~~~-~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSE-HRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp GEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-------CHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred HEEEEEEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCC---CCHH-HHHHHHHHHHHHHHCCCCEEEEEEEEECCC
T ss_conf 979844984167839999998677755578399999986001---7178-999999999988614998499741154047
Q ss_pred CCEEEEEECCCC-CCHHHHHCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEC
Q ss_conf 887999903535-9988886099----------------99999999999999999999999889852578899689913
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 159 (1553)
Q Consensus 97 ~~~~~LV~e~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~ 159 (1553)
+...|+|+|||+ |+|.+++..+ ..+++.+++.|+.|++.||.|||++||+||||||+|||++.
T Consensus 90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~ 169 (299)
T d1ywna1 90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 169 (299)
T ss_dssp TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG
T ss_pred CCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC
T ss_conf 97579999845899299999853666665322202332146899999999999999999887379717867731065779
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-C
Q ss_conf 992999413763212688999999612220489873236841001268863223579999842479999999999809-9
Q 000410 160 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-V 238 (1553)
Q Consensus 160 ~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~ 238 (1553)
++.+||+|||+++....... .....+..|++.|+|||.+. ...++.++||||+||++|||+++ .
T Consensus 170 ~~~~Kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~APE~l~----------~~~~~~~sDiwS~Gvil~ellt~~~ 234 (299)
T d1ywna1 170 KNVVKICDFGLARDIYKDPD-----YVRKGDARLPLKWMAPETIF----------DRVYTIQSDVWSFGVLLWEIFSLGA 234 (299)
T ss_dssp GGCEEECC------CCSCTT-----SCCTTSCCCGGGGCCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEECCCCCHHHCCCCCC-----CCCCCCEEECCCCCCHHHHH----------CCCCCCCCCEEEHHHHHHHHHHCCC
T ss_conf 98289845752001135665-----22247516672102036864----------6889966322136789999986889
Q ss_pred CCCCCHH----HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9998337----9999826889998789999987999999810018488999999998520
Q 000410 239 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 239 ~~f~~~~----~~~~~~~~~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
+||.... .......... ...+...++.++++|.+||+.||++|||+.|+++|+.
T Consensus 235 ~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~ 292 (299)
T d1ywna1 235 SPYPGVKIDEEFCRRLKEGTR--MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292 (299)
T ss_dssp CSSTTCCCSHHHHHHHHHTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 999899989999999963898--8888657899999999976779667919999999997
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-44 Score=322.14 Aligned_cols=244 Identities=19% Similarity=0.253 Sum_probs=194.6
Q ss_pred CEEEEEEEECCCCEEEEEEEEC--CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE------C
Q ss_conf 5699988502570999999988--9559999995169974789999999999999961899975488799980------8
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET------D 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~--~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~------~ 97 (1553)
+|++.+.||+|+||+||+|++. +..||||++.+.. .......++.+|..+++.++||||+++++++.. .
T Consensus 18 ~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~---~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~ 94 (355)
T d2b1pa1 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 94 (355)
T ss_dssp TEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTT---SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHH---CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCC
T ss_conf 7599889621758599999999999899999988233---6979999999999999864898764899897025643457
Q ss_pred CEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCC
Q ss_conf 87999903535998888609999999999999999999999999889852578899689913992999413763212688
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~LV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~ 177 (1553)
...|+|+||+.+++.+.+.. .+++.+++.+++|++.||.|||++||+||||||+|||++.++.++++|||.++.....
T Consensus 95 ~~~~iv~Ey~~~~l~~~~~~--~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~ 172 (355)
T d2b1pa1 95 QDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_dssp CEEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred CEEEEEEECCCHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHCCCCC
T ss_conf 62699984144677876503--8999999999999999998865221124567763211365443132010232114666
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH----H----
Q ss_conf 99999961222048987323684100126886322357999984247999999999980999998337999----9----
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----Y---- 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~----~---- 249 (1553)
.......+|+.|+|||.+. +..++.++||||+||++|||++|++||....... +
T Consensus 173 --------~~~~~~~~t~~y~aPE~l~----------~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~ 234 (355)
T d2b1pa1 173 --------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234 (355)
T ss_dssp ----------------CCTTCCHHHHT----------TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred --------CCCCCCCCCCCCCCHHHHC----------CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf --------5533221465555813314----------7777877433356625789865989988897788999999720
Q ss_pred ------------------HHCCCCC-CCC---------CC------CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf ------------------8268899-987---------89------9999879999998100184889999999985
Q 000410 250 ------------------RRGQYDP-SQH---------LE------KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ------------------~~~~~~~-~~~---------~~------~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
....... ... .. ...++.+++||.+||..||++||||+|+|+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~H 311 (355)
T d2b1pa1 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 311 (355)
T ss_dssp CCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 58987999876566777764175435666421264333543210133379999999999876994579089999669
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-43 Score=320.60 Aligned_cols=250 Identities=19% Similarity=0.170 Sum_probs=199.4
Q ss_pred CEEEEEEEECCCCEEEEEEEECC---------CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC-CCCCEEEEEEEEE
Q ss_conf 56999885025709999999889---------5599999951699747899999999999999618-9997548879998
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~---------~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIl~~~~~~~ 95 (1553)
+|++++.||+|+||.||+|++.+ ..||+|++.+.. . .....++.+|...+..+ +||||+++++++.
T Consensus 14 ~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~---~-~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~ 89 (299)
T d1fgka_ 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---T-EKDLSDLISEMEMMKMIGKHKNIINLLGACT 89 (299)
T ss_dssp GEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC---C-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEEECCCC---C-HHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 96970098516782899999857875556675499999988112---8-6889999999999998139996973465220
Q ss_pred ECCEEEEEECCCC-CCHHHHHCCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEE
Q ss_conf 0887999903535-99888860999----------------999999999999999999999988985257889968991
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~LV~e~~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~ 158 (1553)
++...|+|+||+. |+|.+++..+. .+++.+++.++.||+.||+|||+++|+||||||+|||++
T Consensus 90 ~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~ 169 (299)
T d1fgka_ 90 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 169 (299)
T ss_dssp SSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEC
T ss_conf 18868999973699909999986067764322233457434679999999999999999876637978630221022454
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-C
Q ss_conf 399299941376321268899999961222048987323684100126886322357999984247999999999980-9
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g 237 (1553)
.++.+||+|||.++........ .......+++.|+|||.+. .+.|++++||||+||++|||++ |
T Consensus 170 ~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~l~----------~~~y~~k~DiwS~Gvvl~ell~~g 234 (299)
T d1fgka_ 170 EDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALF----------DRIYTHQSDVWSFGVLLWEIFTLG 234 (299)
T ss_dssp TTCCEEECSTTCCCCGGGCCTT-----CCCTTSCCGGGGSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEECCCHHHCCCCCCCCC-----CCCCCCCCCHHHHHHHHHC----------CCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 7897676221110113555554-----3146678884663266751----------798882555477588888740179
Q ss_pred CCCCCCHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9999833799998268-89998789999987999999810018488999999998520
Q 000410 238 VPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 238 ~~~f~~~~~~~~~~~~-~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
.+||............ .......+...++.+++||.+||+.||++|||+.|+++.+.
T Consensus 235 ~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~ 292 (299)
T d1fgka_ 235 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292 (299)
T ss_dssp CCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 8989999999999999728888987435299999999976679767939999999998
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-43 Score=318.94 Aligned_cols=268 Identities=13% Similarity=0.100 Sum_probs=208.9
Q ss_pred CCCCCCCC---CCCCCCEEEEEEEECCCCEEEEEEEECC-------CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf 32222346---9986456999885025709999999889-------5599999951699747899999999999999618
Q 000410 13 ATEYYLHD---LPSSYNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI 82 (1553)
Q Consensus 13 ~~~~y~~~---~~~~~~y~~~~~LG~G~f~~V~~a~~~~-------~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l 82 (1553)
.++.|+.| ++. -+|++.+.||+|+||.||+|.+.. ..||||++.+. ........+.+|.++++.+
T Consensus 6 ~~~~~~~~~~ei~~-~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~----~~~~~~~~~~~E~~il~~l 80 (308)
T d1p4oa_ 6 AADVYVPDEWEVAR-EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA----ASMRERIEFLNEASVMKEF 80 (308)
T ss_dssp CCSCCCCCTTBCCG-GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT----SCHHHHHHHHHHHHHGGGC
T ss_pred CCCCCCCCCEEECH-HHEEEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEEECCC----CCHHHHHHHHHHHHHHHHC
T ss_conf 03376861004268-991883598207881899999878644778968999998701----2868999999999999976
Q ss_pred CCCCEEEEEEEEEECCEEEEEECCCC-CCHHHHHCCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
Q ss_conf 99975488799980887999903535-9988886099----------999999999999999999999998898525788
Q 000410 83 DHPHVWAFQFWQETDKAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIK 151 (1553)
Q Consensus 83 ~hpnIl~~~~~~~~~~~~~LV~e~~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIK 151 (1553)
+||||+++++++..+...++|+||+. |+|.+++... ..+++..+..|+.|++.||.|||+++|+|||||
T Consensus 81 ~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk 160 (308)
T d1p4oa_ 81 NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLA 160 (308)
T ss_dssp CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCS
T ss_pred CCCCEEEEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEEC
T ss_conf 99988412547842881067776048998899987503321134446887999999999999999998764796543286
Q ss_pred CCCEEEECCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99689913992999413763212688999999612220489873236841001268863223579999842479999999
Q 000410 152 CENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 231 (1553)
Q Consensus 152 peNILi~~~~~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl 231 (1553)
|+|||++.++++||+|||+++...... .........+++.|+|||.+. ...++.++||||+||++
T Consensus 161 ~~NiLld~~~~~Kl~DFGla~~~~~~~-----~~~~~~~~~~t~~y~aPe~l~----------~~~~~~~~Dv~S~G~il 225 (308)
T d1p4oa_ 161 ARNCMVAEDFTVKIGDFGMTRDIYETD-----YYRKGGKGLLPVRWMSPESLK----------DGVFTTYSDVWSFGVVL 225 (308)
T ss_dssp GGGEEECTTCCEEECCTTCCCGGGGGG-----CEEGGGSSEECGGGCCHHHHH----------HCCCCHHHHHHHHHHHH
T ss_pred CCCEEECCCCEEEEEECCCCEECCCCC-----CEEECCCEECCCCCCCHHHHC----------CCCCCCCCCCCCHHHHH
T ss_conf 775403599649994245420235776-----303134023163237888873----------69988333444378999
Q ss_pred HHHHCC-CCCCCCHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 999809-999983379999826889-998789999987999999810018488999999998520123999
Q 000410 232 AELFLE-VPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPT 300 (1553)
Q Consensus 232 ~eLltg-~~~f~~~~~~~~~~~~~~-~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~~~~fp~ 300 (1553)
|||+++ .+||.............. .....+...++.+.++|.+||+.||++|||+.+++++++...-|.
T Consensus 226 ~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~ 296 (308)
T d1p4oa_ 226 WEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG 296 (308)
T ss_dssp HHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCC
T ss_conf 99996899999998999999999808888886335399999999975779658939999999978761778
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-42 Score=313.45 Aligned_cols=254 Identities=15% Similarity=0.151 Sum_probs=198.9
Q ss_pred CCCCEEEEEEEECCCCEEEEEEEECC--C---EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE-
Q ss_conf 86456999885025709999999889--5---59999995169974789999999999999961899975488799980-
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHDE--G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET- 96 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~f~~V~~a~~~~--~---~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~- 96 (1553)
+...+.+.+.||+|+||+||+|++.+ + .||||++.+. ......+.+.+|.++++.++||||+++++++..
T Consensus 25 ~~~~~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~----~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~ 100 (311)
T d1r0pa_ 25 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI----TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100 (311)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCC----CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET
T ss_pred HHCEECCCEEEEECCCEEEEEEEEECCCCEEEEEEEEEECCC----CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC
T ss_conf 881552666981368809999999779987999999998843----6978999999999999867899986786789806
Q ss_pred CCEEEEEECCCC-CCHHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCC
Q ss_conf 887999903535-99888860999-9999999999999999999999889852578899689913992999413763212
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 ~~~~~LV~e~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~ 174 (1553)
+...++|+|||+ |+|.+++..+. .+++.++..++.|++.||.|+|+.+|+||||||+|||+++.+.+||+|||+++..
T Consensus 101 ~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~ 180 (311)
T d1r0pa_ 101 EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM 180 (311)
T ss_dssp TTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCT
T ss_pred CCCEEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEECCCCCEEEECCCCHHHC
T ss_conf 99438999874067414421013454048999999999887652003367625776687576779998899106523225
Q ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCHHHHH----H
Q ss_conf 688999999612220489873236841001268863223579999842479999999999809-99998337999----9
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLA----Y 249 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg-~~~f~~~~~~~----~ 249 (1553)
....... ........|+..|+|||.+. ...++.++||||+||++|||+++ .||+....... +
T Consensus 181 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~----------~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i 247 (311)
T d1r0pa_ 181 YDKEFDS---VHNKTGAKLPVKWMALESLQ----------TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 247 (311)
T ss_dssp TTTTCCC---TTCTTCSSCCGGGSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHH
T ss_pred CCCCCCC---CEECCCCCCCCCCCCHHHHH----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
T ss_conf 5665553---10025655564556768874----------3799974574661999999997899998889999999999
Q ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 82688999878999998799999981001848899999999852012
Q 000410 250 RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 250 ~~~~~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~~~ 296 (1553)
..+.. ...+...++.+.+||.+||+.||++||++.|+++++...
T Consensus 248 ~~g~~---~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i 291 (311)
T d1r0pa_ 248 LQGRR---LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291 (311)
T ss_dssp HTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HCCCC---CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHH
T ss_conf 80898---899644759999999997688976893999999999999
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-44 Score=323.53 Aligned_cols=252 Identities=20% Similarity=0.230 Sum_probs=202.1
Q ss_pred CEEEEEEEECCCCEEEEEEEEC-----CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCC-CCEEEEEEEEEECCE
Q ss_conf 5699988502570999999988-----9559999995169974789999999999999961899-975488799980887
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDH-PHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~-----~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~h-pnIl~~~~~~~~~~~ 99 (1553)
+|++.+.||+|+||+||+|++. +..||+|++.+.....+ ....+.+.+|.++++.++| |||+++++++++...
T Consensus 25 ~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~-~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 25 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK-AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE-ESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCC-HHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCC
T ss_conf 25999898328783999999876588794899999836772101-68999999999999864679839996200024873
Q ss_pred EEEEECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf 999903535-9988886099999999999999999999999998898525788996899139929994137632126889
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~LV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~ 178 (1553)
.|+++||+. |+|.+++.....+.+..++.++.||+.||.|+|++||+||||||+|||++.++.++|+|||.++......
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~ 183 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 183 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGG
T ss_pred EEEEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCEEEEECCCHHHHCCCC
T ss_conf 00123123411799998730454378888889999999988514998965477320124699988874132022203444
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCH----HHHHHHHCCC
Q ss_conf 999996122204898732368410012688632235799998424799999999998099999833----7999982688
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~----~~~~~~~~~~ 254 (1553)
.....+..|++.|+|||.+.. ....++.++||||+||++|||++|.+||... ....+.++..
T Consensus 184 ------~~~~~~~~g~~~~~~pe~~~~--------~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~ 249 (322)
T d1vzoa_ 184 ------TERAYDFCGTIEYMAPDIVRG--------GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRIL 249 (322)
T ss_dssp ------GGGGCGGGSCCTTCCHHHHTT--------CC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHH
T ss_pred ------CCCCCCCCCCCCCCHHHHHHC--------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
T ss_conf ------432212223333310687605--------776887132517777999999768999888877779999998335
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHH
Q ss_conf 999878999998799999981001848899-----99999985
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~-----sa~e~L~~ 292 (1553)
.....++...++.+++||.+||+.||++|+ +++|+++|
T Consensus 250 ~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~H 292 (322)
T d1vzoa_ 250 KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 292 (322)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCC
T ss_conf 6899886547999999999974458988199974509999749
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-44 Score=322.54 Aligned_cols=242 Identities=17% Similarity=0.158 Sum_probs=198.7
Q ss_pred CEEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE-ECCEEEEEE
Q ss_conf 5699988502570999999988955999999516997478999999999999996189997548879998-088799990
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQE-TDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~-~~~~~~LV~ 104 (1553)
+|++.+.||+|+||.||+|++++..||+|++.+.. ..+.+.+|.++++.++||||+++++++. .+...|+|+
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~vAvK~i~~~~-------~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 80 (262)
T d1byga_ 8 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 80 (262)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC---------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred HEEEEEEEECCCCEEEEEEEECCEEEEEEEECCHH-------HHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEE
T ss_conf 94885798207980899999999099999988577-------79999999999986789898549878872389289999
Q ss_pred CCCC-CCHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 3535-99888860999--99999999999999999999998898525788996899139929994137632126889999
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 e~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~ 181 (1553)
||++ |+|.+++.++. .+++..++.|+.|++.||.|||+++|+||||||+|||++.++.++|+|||.++....
T Consensus 81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~----- 155 (262)
T d1byga_ 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS----- 155 (262)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred ECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECCCCCEEECCCCCCEECCC-----
T ss_conf 636999899998745788889999999999998523211337655366656760146899776324560034478-----
Q ss_pred CCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCHHHHHHHHCCC-CCCCC
Q ss_conf 9961222048987323684100126886322357999984247999999999980-999998337999982688-99987
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g~~~f~~~~~~~~~~~~~-~~~~~ 259 (1553)
...+..++..|+|||.+. ...++.++||||+||++|||++ |.+||.......+..... .....
T Consensus 156 -----~~~~~~~~~~y~aPE~l~----------~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~ 220 (262)
T d1byga_ 156 -----TQDTGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 220 (262)
T ss_dssp -----------CCTTTSCHHHHH----------HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCC
T ss_pred -----CCCCCCCCCCCCCHHHHH----------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCC
T ss_conf -----776556664677817872----------79888588777579999999978999999999999999998089999
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 89999987999999810018488999999998520
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
.+...++.+++||.+||+.||++|||+.++++++.
T Consensus 221 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~ 255 (262)
T d1byga_ 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255 (262)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 97657999999999975669768939999999999
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.5e-42 Score=313.60 Aligned_cols=249 Identities=14% Similarity=0.233 Sum_probs=189.6
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC-CCCEEEEEE
Q ss_conf 223469986456999885025709999999889--55999999516997478999999999999996189-997548879
Q 000410 16 YYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQF 92 (1553)
Q Consensus 16 ~y~~~~~~~~~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIl~~~~ 92 (1553)
.+..+..+.-+|++.+.||+|+||+||+|++.. ..||+|++.+. . .+.+.+|+++++.+. ||||+++++
T Consensus 26 ~~~~~~~~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~----~----~~~~~~Ei~il~~l~~hpnIv~~~~ 97 (328)
T d3bqca1 26 SHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----K----KKKIKREIKILENLRGGPNIITLAD 97 (328)
T ss_dssp GCCCCCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS----C----HHHHHHHHHHHHHHTTSTTBCCEEE
T ss_pred HCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECHH----H----HHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 3236789986718978983174819999998899979999998889----9----9999999999985157998767999
Q ss_pred EEEE--CCEEEEEECCCCC-CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCC-CEEEEEC
Q ss_conf 9980--8879999035359-9888860999999999999999999999999988985257889968991399-2999413
Q 000410 93 WQET--DKAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDF 168 (1553)
Q Consensus 93 ~~~~--~~~~~LV~e~~~g-sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~-~vkL~DF 168 (1553)
+++. ....|+||||+.+ +|.... ..+++.+++.++.||+.||.|||++||+||||||+|||++..+ .++|+||
T Consensus 98 ~~~~~~~~~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DF 174 (328)
T d3bqca1 98 IVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDW 174 (328)
T ss_dssp EEECTTTCSEEEEEECCCSCBGGGTT---TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCG
T ss_pred EEEECCCCCEEEEEEECCCCCHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCC
T ss_conf 99816877126888631798589974---689999999999999999988764334434564412377489983664156
Q ss_pred CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH---
Q ss_conf 76321268899999961222048987323684100126886322357999984247999999999980999998337---
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--- 245 (1553)
Q Consensus 169 g~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~--- 245 (1553)
|.++...... ......+++.|+|||.+.. ...++.++||||+||++|||++|.+||....
T Consensus 175 G~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~ 237 (328)
T d3bqca1 175 GLAEFYHPGQ--------EYNVRVASRYFKGPELLVD---------YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 237 (328)
T ss_dssp GGCEECCTTC--------CCCSCCSCGGGCCHHHHTT---------CCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHH
T ss_pred CCCEECCCCC--------CCCCCCCCCCCCCCCCCCC---------CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 5426646887--------4443224864247610268---------8888845232335455587604889998876018
Q ss_pred --HHHH------------H-HCCCCC--------------------CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf --9999------------8-268899--------------------9878999998799999981001848899999999
Q 000410 246 --LLAY------------R-RGQYDP--------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYL 290 (1553)
Q Consensus 246 --~~~~------------~-~~~~~~--------------------~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L 290 (1553)
...+ . ...... ........++++++||.+||+.||++|+||+|+|
T Consensus 238 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L 317 (328)
T d3bqca1 238 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 317 (328)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHH
T ss_conf 99999999878841555554225444743000003334331121155211244899999999998669956890899996
Q ss_pred HH
Q ss_conf 85
Q 000410 291 QN 292 (1553)
Q Consensus 291 ~~ 292 (1553)
+|
T Consensus 318 ~H 319 (328)
T d3bqca1 318 EH 319 (328)
T ss_dssp TS
T ss_pred CC
T ss_conf 49
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-43 Score=318.70 Aligned_cols=254 Identities=17% Similarity=0.095 Sum_probs=200.5
Q ss_pred CCCEEEEEEEECCCCEEEEEEEECC-----CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC
Q ss_conf 6456999885025709999999889-----55999999516997478999999999999996189997548879998088
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~f~~V~~a~~~~-----~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~ 98 (1553)
.-||++.+.||+|+||.||+|++.. ..||+|++.+... ......+.+.+|..+++.++||||+++++++.++
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~--~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~- 83 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL--SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP- 83 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC----------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-
T ss_pred HHHEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEEEECHHHC--CCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC-
T ss_conf 4891997898038883999999988999079999999983555--7989999999999999868999987898777401-
Q ss_pred EEEEEECCCC-CCHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCC
Q ss_conf 7999903535-9988886099-9999999999999999999999988985257889968991399299941376321268
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 99 ~~~LV~e~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~ 176 (1553)
..|+|+||++ |+|.+++..+ ..+++.+++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~ 163 (273)
T d1u46a_ 84 PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163 (273)
T ss_dssp SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred CHHEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHCCCCCCCEEECCCHHHHHCCC
T ss_conf 00114654238612544421268999999999999999999875217875205668881565565433256115553035
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCHHHHHHHHCCC-
Q ss_conf 899999961222048987323684100126886322357999984247999999999980-999998337999982688-
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY- 254 (1553)
Q Consensus 177 ~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLlt-g~~~f~~~~~~~~~~~~~- 254 (1553)
.. ..........++..|+|||.+. ...++.++||||+||++|||++ |.+||.............
T Consensus 164 ~~----~~~~~~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~ 229 (273)
T d1u46a_ 164 ND----DHYVMQEHRKVPFAWCAPESLK----------TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK 229 (273)
T ss_dssp -C----CEEEC-----CCGGGCCHHHHH----------HCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT
T ss_pred CC----CCCEECCCCCCCCCCCCHHHHH----------CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 88----7526547632573107999983----------799994215661489999999689999999699999999984
Q ss_pred -CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf -9998789999987999999810018488999999998520
Q 000410 255 -DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 255 -~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
......+...++.+++||.+||..||++|||+.++++-+.
T Consensus 230 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~ 270 (273)
T d1u46a_ 230 EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 270 (273)
T ss_dssp SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 79999985445399999999976889667929999999999
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.2e-39 Score=287.42 Aligned_cols=305 Identities=18% Similarity=0.280 Sum_probs=256.7
Q ss_pred CCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE
Q ss_conf 88555753754502244574599990799799999399959999489775333222203564179712899983298699
Q 000410 1123 SGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1123 ~~W~p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~l 1202 (1553)
+.|.|++....+|.||+++|++++|+|++.+|+|||.||+|+|||+.+++ ...++.+|...|.+++|++++..+
T Consensus 1 k~w~p~~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~------~~~~~~~h~~~V~~~~~~~~~~~~ 74 (317)
T d1vyhc1 1 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD------FERTLKGHTDSVQDISFDHSGKLL 74 (317)
T ss_dssp CCCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC------CCEEECCCSSCEEEEEECTTSSEE
T ss_pred CCCCCCCCCCEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCC------EEEEEECCCCCEEEEEEECCCCCC
T ss_conf 93689898448985888876899993898999999389929999899997------999995788867777630111101
Q ss_pred EEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCC
Q ss_conf 99807993999993312568886433456434210026998489999812799850399999589639999699896443
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 vs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
++++.++.+..|+.... ........+...+....++++ ++.+++++.|+.+++||+++++...
T Consensus 75 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~ 137 (317)
T d1vyhc1 75 ASCSADMTIKLWDFQGF--------------ECIRTMHGHDHNVSSVSIMPN---GDHIVSASRDKTIKMWEVQTGYCVK 137 (317)
T ss_dssp EEEETTSCCCEEETTSS--------------CEEECCCCCSSCEEEEEECSS---SSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCCCCCCCCCCCCCCC--------------CCCCCCCCCCCCCEEEECCCC---CCEEEEECCCCCEEEEECCCCEEEE
T ss_conf 11111111011100111--------------111110000000000001699---8557765267523575114430346
Q ss_pred EECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCC-----------CC
Q ss_conf 0005888766389999699989999927993999968889643526503568831489645999975-----------44
Q 000410 1283 TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA-----------VS 1351 (1553)
Q Consensus 1283 ~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~-----------~~ 1351 (1553)
.+.. |...+.++++++++.++++|+.||.+++||++.......+.. +...+..+.+ .|..... ..
T Consensus 138 ~~~~--~~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~~~~-~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~ 213 (317)
T d1vyhc1 138 TFTG--HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE-HRHVVECISW-APESSYSSISEATGSETKKS 213 (317)
T ss_dssp EEEC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEE-CCSCGGGGGGGCCSCC----
T ss_pred EECC--CCCCCEEEECCCCCCEEEEEECCCEEEEEEECCCEEEEEEEC-CCCCCEEEEE-EECCCCCEEECCCCCEEEEE
T ss_conf 8716--777630000166799999992798299975125403478824-7787337998-63256411103456303430
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68998899997699399999588818999861468998766777632358998899986322244532222333899988
Q 000410 1352 TTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPR 1431 (1553)
Q Consensus 1352 s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1431 (1553)
...+..+++++.|+.|.+||+.++++...+..+.
T Consensus 214 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~---------------------------------------------- 247 (317)
T d1vyhc1 214 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD---------------------------------------------- 247 (317)
T ss_dssp ---CCEEEEEETTSEEEEEETTTTEEEEEEECCS----------------------------------------------
T ss_pred CCCCCEEEECCCCCEEEEEECCCCCEEEEEECCC----------------------------------------------
T ss_conf 2588614751699789998889996889996889----------------------------------------------
Q ss_pred CCCCEEECCCCCC-EEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHH
Q ss_conf 6681782338999-089816998199983999999649718998898898407886058709999320588640234788
Q 000410 1432 LLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKA 1510 (1553)
Q Consensus 1432 ~~~V~sl~~sp~g-~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 1510 (1553)
..|++++++|++ .+++|+.|+.|++||+.+++....+.+
T Consensus 248 -~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------------------------------- 287 (317)
T d1vyhc1 248 -NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA--------------------------------------- 287 (317)
T ss_dssp -SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC---------------------------------------
T ss_pred -CCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEECC---------------------------------------
T ss_conf -9879999879999999997989499999999919999928---------------------------------------
Q ss_pred HHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 8865201766887530458752206981999980895289829
Q 000410 1511 VLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1511 ~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
|.+.|+++ .|++++++|+||+.||.|+||+
T Consensus 288 ------------h~~~V~~~-~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 288 ------------HEHFVTSL-DFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp ------------CSSCEEEE-EECSSSSCEEEEETTSEEEEEC
T ss_pred ------------CCCCEEEE-EECCCCCEEEEEECCCEEEEEC
T ss_conf ------------99988999-9949999999992899499829
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.4e-43 Score=317.30 Aligned_cols=247 Identities=19% Similarity=0.192 Sum_probs=192.4
Q ss_pred CCCCCCEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEC-
Q ss_conf 9986456999885025709999999889--5599999951699747899999999999999618999754887999808-
Q 000410 21 LPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD- 97 (1553)
Q Consensus 21 ~~~~~~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~- 97 (1553)
+++ +|++.+.||+|+||+||+|++.. ..||+|++.+... . ....+.+.+|+++++.++||||+++++++...
T Consensus 16 ~~~--rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~-~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~ 90 (348)
T d2gfsa1 16 VPE--RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--S-IIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 90 (348)
T ss_dssp EET--TEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS--S-HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred CCC--CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCHHC--C-HHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC
T ss_conf 898--71888898317883999999999997999999882002--8-689999999999998668987425999996346
Q ss_pred -----CEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCC
Q ss_conf -----879999035359988886099999999999999999999999998898525788996899139929994137632
Q 000410 98 -----KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 98 -----~~~~LV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k 172 (1553)
...|+++++..|+|++++..+ .+++.+++.++.||+.||.|||++||+||||||+|||++.++.++++|||.+.
T Consensus 91 ~~~~~~~~~i~~~~~gg~L~~~~~~~-~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~ 169 (348)
T d2gfsa1 91 SLEEFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169 (348)
T ss_dssp STTTCCCCEEEEECCSEEHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred CCCCCCEEEEEEEECCCCHHHHCCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
T ss_conf 45668649999962588623200224-53099999999999999999973887651667763345543220013210001
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH----
Q ss_conf 1268899999961222048987323684100126886322357999984247999999999980999998337999----
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA---- 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~---- 248 (1553)
... ....+..|++.|+|||.+.. ...++.++||||+||++|+|++|.+||.......
T Consensus 170 ~~~----------~~~~~~~g~~~y~apE~~~~---------~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~ 230 (348)
T d2gfsa1 170 HTD----------DEMTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230 (348)
T ss_dssp CCT----------GGGSSSCHHHHTSCHHHHTT---------CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred CCC----------CCCCCCCCCCCCCCCHHHCC---------CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 257----------54444345435558355337---------75678551243205899999768899788988999999
Q ss_pred HHHCCCC------------------------CCCC---CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 9826889------------------------9987---899999879999998100184889999999985
Q 000410 249 YRRGQYD------------------------PSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~------------------------~~~~---~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
+.+.... .... .....++.+++||.+||+.||++|+||.|+|+|
T Consensus 231 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~H 301 (348)
T d2gfsa1 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301 (348)
T ss_dssp HHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 99730799757732001024454443035578755566267899999999999775883459389998559
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-42 Score=309.99 Aligned_cols=255 Identities=18% Similarity=0.162 Sum_probs=189.9
Q ss_pred CEEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECC----EEE
Q ss_conf 5699988502570999999988955999999516997478999999999999996189997548879998088----799
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----AAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~----~~~ 101 (1553)
+|++.+.||+|+||.||+|++++..||||++... .... ...+.|...+..++||||+++++++.++. ..|
T Consensus 4 ~~~l~~~iG~G~fg~Vy~~~~~g~~vAvK~~~~~----~~~~--~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~ 77 (303)
T d1vjya_ 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR----EERS--WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GEEEEEEEECCSSSEEEEEEETTEEEEEEEECGG----GHHH--HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred EEEEEEEEEECCCEEEEEEEECCEEEEEEEECCC----CHHH--HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEE
T ss_conf 8999889820788199999999989999998720----0467--999999999962799868326889983798604899
Q ss_pred EEECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCCEECCCCCCCEEEECCCCEEEEECCCCC
Q ss_conf 9903535-9988886099999999999999999999999998--------898525788996899139929994137632
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE--------KGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 102 LV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~--------~gIiH~DIKpeNILi~~~~~vkL~DFg~~k 172 (1553)
+|+||+. |+|.+++.+.+ +++.+...++.|++.||.|+|+ +||+||||||+|||++.++.+||+|||+++
T Consensus 78 lv~Ey~~~g~L~~~l~~~~-l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~ 156 (303)
T d1vjya_ 78 LVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEEECCTTCBHHHHHHHCC-BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEECCCCCCHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCEEEEECCCCC
T ss_conf 9996466989899986589-998999999999999999988766520468986615317313578688776887638662
Q ss_pred CCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCH--------
Q ss_conf 126889999996122204898732368410012688632235799998424799999999998099999833--------
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-------- 244 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~-------- 244 (1553)
......+ ..........|++.|+|||.+..... .....++.++||||+||++|||++|.+||...
T Consensus 157 ~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~ 229 (303)
T d1vjya_ 157 RHDSATD---TIDIAPNHRVGTKRYMAPEVLDDSIN----MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp EEETTTT---EECC----CCSCGGGCCHHHHTTCSC----TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTT
T ss_pred CCCCCCC---CEECCCCCEECCCCCCCHHHCCCCCC----CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
T ss_conf 3467776---20013552503547678221056545----4677767501220159999999628998876631124101
Q ss_pred -------HHHHHHHCCCC--CCCCCCCC-----CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf -------79999826889--99878999-----9987999999810018488999999998520
Q 000410 245 -------HLLAYRRGQYD--PSQHLEKI-----PDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 245 -------~~~~~~~~~~~--~~~~~~~i-----~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
........... ..+.++.. ....+.+|+.+||+.||++|||+.|+++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~ 293 (303)
T d1vjya_ 230 DLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred HCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 2255643099999987502468887765577689999999999976069858959999999999
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.7e-38 Score=281.64 Aligned_cols=292 Identities=16% Similarity=0.220 Sum_probs=236.6
Q ss_pred CCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECC
Q ss_conf 53754502244574599990799799999399959999489775333222203564179712899983298699998079
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~D 1208 (1553)
.+.+.++ +|...|++++|+|++++++||+ ||+|+|||+........ ........|.+.|.+++|+|+++.|++|+.|
T Consensus 42 ~~~~~~~-~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~-~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~d 118 (337)
T d1gxra_ 42 ARQINTL-NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSP-VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA 118 (337)
T ss_dssp EEEEEEE-CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSC-SEEEECSCTTSBEEEEEECTTSSEEEEEESS
T ss_pred CEEEEEC-CCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCCCCCE-EEEEEECCCCCCEEEEEECCCCCEEEEEECC
T ss_conf 5499987-9999289999989999999997-99889977367763311-6876404889968999986799889886123
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCCC
Q ss_conf 93999993312568886433456434210026998489999812799850399999589639999699896443000588
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1288 (1553)
Q Consensus 1209 GsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~~ 1288 (1553)
|+|++|++.... .........+...+..+.|+++ +..+++++.++.|.+||++++++......
T Consensus 119 g~i~iwd~~~~~------------~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~~~~~~~~~~~~~~~-- 181 (337)
T d1gxra_ 119 STLSIWDLAAPT------------PRIKAELTSSAPACYALAISPD---SKVCFSCCSDGNIAVWDLHNQTLVRQFQG-- 181 (337)
T ss_dssp SEEEEEECCCC--------------EEEEEEECSSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTTEEEEEECC--
T ss_pred CCCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 321111111111------------1111111111111111111111---11111111111111111111111111111--
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 87663899996999899999279939999688896435265035688314896459999754468998899997699399
Q 000410 1289 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368 (1553)
Q Consensus 1289 h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~ 1368 (1553)
|.+.+++++|++++..+++|+.||.+++||++.+..+..+. +..+|.++.+ +|. +.++++++.++.+.
T Consensus 182 ~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~--~~~~i~~l~~-~~~---------~~~l~~~~~d~~i~ 249 (337)
T d1gxra_ 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD--FTSQIFSLGY-CPT---------GEWLAVGMESSNVE 249 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEE-CTT---------SSEEEEEETTSCEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC--CCCCEEEEEE-CCC---------CCCCCEECCCCCCC
T ss_conf 11111101234443211223566553211111100000246--6661579997-153---------03000000256421
Q ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-EEE
Q ss_conf 9995888189998614689987667776323589988999863222445322223338999886681782338999-089
Q 000410 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1447 (1553)
Q Consensus 1369 iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~Ll 1447 (1553)
+||+.++++.... .|...|++++|+|++ .++
T Consensus 250 i~d~~~~~~~~~~------------------------------------------------~~~~~i~~v~~s~~g~~l~ 281 (337)
T d1gxra_ 250 VLHVNKPDKYQLH------------------------------------------------LHESCVLSLKFAYCGKWFV 281 (337)
T ss_dssp EEETTSSCEEEEC------------------------------------------------CCSSCEEEEEECTTSSEEE
T ss_pred CCCCCCCCCCCCC------------------------------------------------CCCCCCCEEEECCCCCEEE
T ss_conf 1111111100001------------------------------------------------2456541699989999999
Q ss_pred ECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 81699819998399999964971899889889840788605870999932058864023478888652017668875304
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1527 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1527 (1553)
+|+.|+.|++||+.+++..... .|.+.|
T Consensus 282 s~s~Dg~i~iwd~~~~~~~~~~----------------------------------------------------~~~~~v 309 (337)
T d1gxra_ 282 STGKDNLLNAWRTPYGASIFQS----------------------------------------------------KESSSV 309 (337)
T ss_dssp EEETTSEEEEEETTTCCEEEEE----------------------------------------------------ECSSCE
T ss_pred EEECCCEEEEEECCCCCEEEEC----------------------------------------------------CCCCCE
T ss_conf 9948996999989999799992----------------------------------------------------699987
Q ss_pred EEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 58752206981999980895289829
Q 000410 1528 LSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1528 ~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+++ .|++++++|++|+.||.|+||+
T Consensus 310 ~~~-~~s~d~~~l~t~s~D~~I~vWd 334 (337)
T d1gxra_ 310 LSC-DISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp EEE-EECTTSCEEEEEETTSCEEEEE
T ss_pred EEE-EEECCCCEEEEEECCCEEEEEE
T ss_conf 999-9927999999990899699997
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.3e-40 Score=295.49 Aligned_cols=250 Identities=16% Similarity=0.068 Sum_probs=190.4
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC-EEEEEEEEEECCEEEE
Q ss_conf 56999885025709999999889--55999999516997478999999999999996189997-5488799980887999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH-VWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpn-Il~~~~~~~~~~~~~L 102 (1553)
+|++.+.||+|+||.||+|++.. ..||||+....... .++..|.++++.+.|+| |..+..+..++...++
T Consensus 8 rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~-------~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~i 80 (299)
T d1ckia_ 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH-------PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 80 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS-------CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEE
T ss_pred EEEEEEEEEECCCCEEEEEEECCCCCEEEEEEECHHCCC-------HHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEE
T ss_conf 899968985078809999999889989999997210058-------8899999999970389960179999951987789
Q ss_pred EECCCCCCHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEC---CCCEEEEECCCCCCCCCCC
Q ss_conf 903535998888609-999999999999999999999999889852578899689913---9929994137632126889
Q 000410 103 LRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS---WNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 103 V~e~~~gsL~d~l~~-~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~---~~~vkL~DFg~~k~~~~~~ 178 (1553)
|+||+.++|.+.+.. ...+++.++..++.|++.||+|||++||+||||||+|||++. ...++|+|||.++......
T Consensus 81 vme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~ 160 (299)
T d1ckia_ 81 VMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160 (299)
T ss_dssp EEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTT
T ss_pred EEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCCCEECCCCC
T ss_conf 99873871333244306887689999999999999999997994426678766064335777615650467513425544
Q ss_pred CCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH----HHH---HH
Q ss_conf 99999612220489873236841001268863223579999842479999999999809999983379----999---82
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAY---RR 251 (1553)
Q Consensus 179 ~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~----~~~---~~ 251 (1553)
...........+..||+.|+|||.+. +..+++++||||+||++|||++|.+||..... ..+ ..
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 230 (299)
T d1ckia_ 161 THQHIPYRENKNLTGTARYASINTHL----------GIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISE 230 (299)
T ss_dssp TCCBCCCCBCCSCCCCSSSCCHHHHT----------TBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHH
T ss_pred CCCCEECCCCCCCCCCCCCCCHHHHH----------CCCCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 55410001357767873532999991----------89989832188617789999849876655305779999998523
Q ss_pred CC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 68-899987899999879999998100184889999999985
Q 000410 252 GQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~-~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.. ..+...+....++++.++|.+|++.||++||++.++.+.
T Consensus 231 ~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~ 272 (299)
T d1ckia_ 231 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 272 (299)
T ss_dssp HHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHH
T ss_pred CCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 567898357534788999999999843995579199999999
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=2.8e-39 Score=290.29 Aligned_cols=250 Identities=17% Similarity=0.075 Sum_probs=193.3
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC-CCCEEEEEEEEEECCEEEE
Q ss_conf 56999885025709999999889--55999999516997478999999999999996189-9975488799980887999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIl~~~~~~~~~~~~~L 102 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+..... .+.+|.+.++.+. |+|++.+++++..+...|+
T Consensus 6 ~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~-------~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~ 78 (293)
T d1csna_ 6 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP-------QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL 78 (293)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSC-------CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCH-------HHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEE
T ss_conf 0699799841788299999998899799999975025829-------999999999996489998779999601881179
Q ss_pred EECCCCCCHHHHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEC-----CCCEEEEECCCCCCCCC
Q ss_conf 9035359988886099-99999999999999999999999889852578899689913-----99299941376321268
Q 000410 103 LRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-----WNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 103 V~e~~~gsL~d~l~~~-~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~-----~~~vkL~DFg~~k~~~~ 176 (1553)
|+||+.++|.+.+... ..++..+...++.|++.||+|||++||+||||||+|||++. .+.++|+|||.++....
T Consensus 79 vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~ 158 (293)
T d1csna_ 79 VIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 158 (293)
T ss_dssp EEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred EEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCCCEEECCCCEEEECCC
T ss_conf 99964888799997520311068999999999999999997796626677131523475434479568723660577146
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCH----HHHHH---
Q ss_conf 89999996122204898732368410012688632235799998424799999999998099999833----79999---
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAY--- 249 (1553)
Q Consensus 177 ~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~----~~~~~--- 249 (1553)
.............+..||+.|+|||.+. ...+++++||||+||++|||++|.+||... ....+
T Consensus 159 ~~~~~~~~~~~~~~~~GT~~y~aPE~~~----------~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i 228 (293)
T d1csna_ 159 PVTKQHIPYREKKNLSGTARYMSINTHL----------GREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERI 228 (293)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHT----------TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHH
T ss_pred CCCCCCEEECCCCCEEECHHHCCHHHHC----------CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
T ss_conf 7665411102467627751026798964----------888886999898319999998698767885302199999999
Q ss_pred HHCC-CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 8268-899987899999879999998100184889999999985
Q 000410 250 RRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ~~~~-~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.... ..+...+....++.+.+++..|+..+|++||+++.+.+.
T Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~ 272 (293)
T d1csna_ 229 GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL 272 (293)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred HHCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 70567999589657998999999999843993008599999999
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.2e-36 Score=268.65 Aligned_cols=303 Identities=17% Similarity=0.234 Sum_probs=227.7
Q ss_pred ECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCC------------CCEEEECCCCCEEEEEEECCCCE
Q ss_conf 502244574599990799799999399959999489775333222------------20356417971289998329869
Q 000410 1134 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFR------------SRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1134 ~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~------------~~~t~~~h~~~I~~i~f~~~~~~ 1201 (1553)
+..+|.++|++++|+|||++||||+ ||+|+|||+.+++...... .......|...|++++|+|+++.
T Consensus 57 ~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 135 (388)
T d1erja_ 57 KSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF 135 (388)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSE
T ss_pred EECCCCCCEEEEEECCCCCEEEEEE-CCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
T ss_conf 6079999689999999999999994-994899981364057663166544324432111014677898899998899980
Q ss_pred EEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCC
Q ss_conf 99980799399999331256888643345643421002699848999981279985039999958963999969989644
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
|++|+.||.|++|+.... ........|...+.++.++++ +..+++++.++.+++||.++....
T Consensus 136 l~s~~~dg~v~i~~~~~~--------------~~~~~~~~h~~~v~~~~~~~~---~~~~~~~~~~~~i~~~d~~~~~~~ 198 (388)
T d1erja_ 136 LATGAEDRLIRIWDIENR--------------KIVMILQGHEQDIYSLDYFPS---GDKLVSGSGDRTVRIWDLRTGQCS 198 (388)
T ss_dssp EEEEETTSCEEEEETTTT--------------EEEEEECCCSSCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEE
T ss_pred CEECCCCCCCCCCCCCCC--------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCEEEEEEECCCCCCC
T ss_conf 121344411112111111--------------111111111111111011111---111112221015654101111110
Q ss_pred CEECCCCCCCCEEEEEECC-CCCEEEEEECCCCEEEEECCCCCCCCEEEC------CCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 3000588876638999969-998999992799399996888964352650------356883148964599997544689
Q 000410 1282 WTLKAIPEEGYVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQY------SQVCPIEKMCLFVPPPNAAVSTTA 1354 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsi~~sp-~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~------~~~~~I~~l~~~~p~~~~~~~s~~ 1354 (1553)
..... .....++.+.+ ++++|++|+.||.+.+||.+.+..+..+.. .|..+|..+.+ +|.
T Consensus 199 ~~~~~---~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-s~~--------- 265 (388)
T d1erja_ 199 LTLSI---EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-TRD--------- 265 (388)
T ss_dssp EEEEC---SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEE-CTT---------
T ss_pred CCCCC---CCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEE-CCC---------
T ss_conf 00012---45442112368878758997389819996345573000102443334577898789999-799---------
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98899997699399999588818999861468998766777632358998899986322244532222333899988668
Q 000410 1355 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1434 (1553)
Q Consensus 1355 ~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1434 (1553)
+.++++++.|+.|++||+.++............. .......|...
T Consensus 266 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~ 310 (388)
T d1erja_ 266 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT-----------------------------------CEVTYIGHKDF 310 (388)
T ss_dssp SSEEEEEETTSEEEEEEC---------------C-----------------------------------EEEEEECCSSC
T ss_pred CCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCC-----------------------------------EEEECCCCCCE
T ss_conf 9999999789928987515776432101344420-----------------------------------01101245532
Q ss_pred CEEECCCCCC-EEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHH
Q ss_conf 1782338999-089816998199983999999649718998898898407886058709999320588640234788886
Q 000410 1435 IRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLA 1513 (1553)
Q Consensus 1435 V~sl~~sp~g-~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 1513 (1553)
|++++|+|++ .+++|+.|+.|++||+.+++....+.+
T Consensus 311 v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~------------------------------------------ 348 (388)
T d1erja_ 311 VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG------------------------------------------ 348 (388)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC------------------------------------------
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEC------------------------------------------
T ss_conf 78999889999999996989799999999969999968------------------------------------------
Q ss_pred HHHCCCCCCCCCCEEEEEE-----EECCCCEEEEECCCCEEEECC
Q ss_conf 5201766887530458752-----206981999980895289829
Q 000410 1514 AAATDSAGCHRDSILSLGS-----VKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1514 ~~~~~~~~~H~d~I~~ia~-----~~~~~~~LvSas~DG~IkVWk 1553 (1553)
|.+.|++++. |++++.+|+|||.||.|+||+
T Consensus 349 ---------H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~ 384 (388)
T d1erja_ 349 ---------HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384 (388)
T ss_dssp ---------CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred ---------CCCCEEEEEEECCCCCCCCCCEEEEEECCCEEEEEE
T ss_conf ---------899789999846742589999999991899799976
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.2e-35 Score=258.27 Aligned_cols=295 Identities=20% Similarity=0.305 Sum_probs=236.4
Q ss_pred CCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECC
Q ss_conf 53754502244574599990799799999399959999489775333222203564179712899983298699998079
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~D 1208 (1553)
.++..+|.||.++|++++|+|++.+|+|||.||+|+|||..+++ ...++..|...|.+++|+|++..+++|+.|
T Consensus 45 ~~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~------~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d 118 (340)
T d1tbga_ 45 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTN------KVHAIPLRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTE------EEEEEECSCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCE------EEEEEECCCCCEEEEEEECCCEEEEEECCC
T ss_conf 06527988878988899998999999999789955563102102------579972465337756760121144310133
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCCC
Q ss_conf 93999993312568886433456434210026998489999812799850399999589639999699896443000588
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1288 (1553)
Q Consensus 1209 GsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~~ 1288 (1553)
+.+.+|+...... .. ........+........... ...+.....+.....++............
T Consensus 119 ~~i~~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 182 (340)
T d1tbga_ 119 NICSIYNLKTREG---------NV-RVSRELAGHTGYLSCCRFLD----DNQIVTSSGDTTCALWDIETGQQTTTFTG-- 182 (340)
T ss_dssp CCEEEEESSSSCS---------CC-CEEEEECCCSSCEEEEEEEE----TTEEEEEETTTEEEEEETTTTEEEEEEEC--
T ss_pred CEEECCCCCCCCC---------CC-CCCEECCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 2010133222212---------22-11100135421101111111----11111112445432001232211111233--
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEE
Q ss_conf 87663899996999899999279939999688896435265035688314896459999754468998899997699399
Q 000410 1289 EEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368 (1553)
Q Consensus 1289 h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~ 1368 (1553)
+...+.+..+.+.+..+++|+.||.+++||++.+.++..+.. |..+|.++++ +|. +.++++++.|+.|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~-h~~~i~~v~~-~p~---------~~~l~s~s~d~~i~ 251 (340)
T d1tbga_ 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG-HESDINAICF-FPN---------GNAFATGSDDATCR 251 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECC-CSSCEEEEEE-CTT---------SSEEEEEETTSCEE
T ss_pred CCEEEEEECCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEC-CCCCEEEEEE-CCC---------CCEEEEEECCCEEE
T ss_conf 101576300124421268760573699999999948899957-8898589999-799---------89999996999699
Q ss_pred EEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-EEE
Q ss_conf 9995888189998614689987667776323589988999863222445322223338999886681782338999-089
Q 000410 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1447 (1553)
Q Consensus 1369 iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~Ll 1447 (1553)
+||+........+... .+...|.++.|+|++ .++
T Consensus 252 ~~~~~~~~~~~~~~~~---------------------------------------------~~~~~i~~~~~s~~~~~l~ 286 (340)
T d1tbga_ 252 LFDLRADQELMTYSHD---------------------------------------------NIICGITSVSFSKSGRLLL 286 (340)
T ss_dssp EEETTTTEEEEEECCT---------------------------------------------TCCSCEEEEEECSSSCEEE
T ss_pred EEEECCCCCCCCCCCC---------------------------------------------CCCCCEEEEEECCCCCEEE
T ss_conf 9752122111111122---------------------------------------------4457458999989999999
Q ss_pred ECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 81699819998399999964971899889889840788605870999932058864023478888652017668875304
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1527 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1527 (1553)
+|+.|+.|++||+.+++....+. +|.+.|
T Consensus 287 ~g~~dg~i~iwd~~~~~~~~~~~---------------------------------------------------~H~~~V 315 (340)
T d1tbga_ 287 AGYDDFNCNVWDALKADRAGVLA---------------------------------------------------GHDNRV 315 (340)
T ss_dssp EEETTSCEEEEETTTCCEEEEEC---------------------------------------------------CCSSCE
T ss_pred EEECCCEEEEEECCCCCEEEEEC---------------------------------------------------CCCCCE
T ss_conf 99797989999999993989984---------------------------------------------------899978
Q ss_pred EEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 58752206981999980895289829
Q 000410 1528 LSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1528 ~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+++ .|++++.+|+|||.||.|+||+
T Consensus 316 ~~l-~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 316 SCL-GVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEE-EECTTSSCEEEEETTSCEEEEC
T ss_pred EEE-EEECCCCEEEEECCCCEEEEEC
T ss_conf 999-9908999999990699799859
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-37 Score=279.13 Aligned_cols=249 Identities=20% Similarity=0.208 Sum_probs=178.4
Q ss_pred CCCCCCCC---CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC----------
Q ss_conf 34699864---56999885025709999999889--5599999951699747899999999999999618----------
Q 000410 18 LHDLPSSY---NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI---------- 82 (1553)
Q Consensus 18 ~~~~~~~~---~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l---------- 82 (1553)
...+++.+ +|++.+.||.|+||+||+|++.. ..||||++.+. ....+...+|..+++.+
T Consensus 3 p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~------~~~~~~~~~Ei~~l~~l~~~~~~~~~~ 76 (362)
T d1q8ya_ 3 PAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD------KVYTEAAEDEIKLLQRVNDADNTKEDS 76 (362)
T ss_dssp CCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC------HHHHHHHHHHHHHHHHHHHTCCSHHHH
T ss_pred CCCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCEEEEEEEECC------CCCHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 88888884478579989975077818999999999979999998343------133689999999999840145555542
Q ss_pred -CCCCEEEEEEEEEE--CCEEEEEECCCC--CC--HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCCC
Q ss_conf -99975488799980--887999903535--99--88886099999999999999999999999998-898525788996
Q 000410 83 -DHPHVWAFQFWQET--DKAAYLLRQYFF--NS--LRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCEN 154 (1553)
Q Consensus 83 -~hpnIl~~~~~~~~--~~~~~LV~e~~~--gs--L~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~-~gIiH~DIKpeN 154 (1553)
.|+||+++++++.. ....+++++++. +. ..........+++.+++.++.|++.||.|||+ +||+||||||+|
T Consensus 77 ~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~N 156 (362)
T d1q8ya_ 77 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN 156 (362)
T ss_dssp HHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGG
T ss_pred CCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 27676478998763125652023432000354200000122346786899999999999998887640586465677057
Q ss_pred EEEECCC------CEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 8991399------2999413763212688999999612220489873236841001268863223579999842479999
Q 000410 155 VLVTSWN------WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVG 228 (1553)
Q Consensus 155 ILi~~~~------~vkL~DFg~~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG 228 (1553)
||++..+ .++++|||.+..... ......+++.|+|||.+. ...++.++||||+|
T Consensus 157 Ill~~~~~~~~~~~~kl~dfg~s~~~~~----------~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG 216 (362)
T d1q8ya_ 157 VLMEIVDSPENLIQIKIADLGNACWYDE----------HYTNSIQTREYRSPEVLL----------GAPWGCGADIWSTA 216 (362)
T ss_dssp EEEEEEETTTTEEEEEECCCTTCEETTB----------CCCSCCSCGGGCCHHHHH----------TCCCCTHHHHHHHH
T ss_pred EEEECCCCCCCCCEEEEEECCCCCCCCC----------CCCCCCCCCCCCCHHHCC----------CCCCCCCCCCCCHH
T ss_conf 0563057656443056753144212344----------542236652105713214----------66777643201237
Q ss_pred HHHHHHHCCCCCCCCHHHH----------HHH------------HCC--------CCCCCCC------------------
Q ss_conf 9999998099999833799----------998------------268--------8999878------------------
Q 000410 229 CVIAELFLEVPFFELSHLL----------AYR------------RGQ--------YDPSQHL------------------ 260 (1553)
Q Consensus 229 ~vl~eLltg~~~f~~~~~~----------~~~------------~~~--------~~~~~~~------------------ 260 (1553)
|++++|++|++||...... ... ... .......
T Consensus 217 ~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (362)
T d1q8ya_ 217 CLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF 296 (362)
T ss_dssp HHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCC
T ss_conf 89999987889989875543210268999999983799878862453220001320122024323577644421000156
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 99999879999998100184889999999985
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
....++.+++||.+||..||.+||||+|+|+|
T Consensus 297 ~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~H 328 (362)
T d1q8ya_ 297 SKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 328 (362)
T ss_dssp CHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTC
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 74358999999999877994579089999669
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.8e-34 Score=256.25 Aligned_cols=293 Identities=13% Similarity=0.121 Sum_probs=216.6
Q ss_pred CCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEE-ECCCCCEEEEEEECCCCEEEEEEC
Q ss_conf 5375450224457459999079979999939995999948977533322220356-417971289998329869999807
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTY-HLEGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~-~~h~~~I~~i~f~~~~~~lvs~s~ 1207 (1553)
|.+...++||.++|++++|+|++++|+|||.||+|++||+.++.. ..++ ..|...|++++|.++++ +++++.
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~------~~~~~~~h~~~v~~v~~~~~g~-~~~~~~ 74 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGIS------NRVFPDVHATMITGIKTTSKGD-LFTVSW 74 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE------EECSSCSCSSCEEEEEECTTSC-EEEEET
T ss_pred CCCCEECCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCE------EEEECCCCCCCEEEEEEECCCE-EECCCC
T ss_conf 861368488887828999979999999990899299999999968------8998378877489988403311-210231
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCC
Q ss_conf 99399999331256888643345643421002699848999981279985039999958963999969989644300058
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|+.+++|+..... ..........+...+..+.++++ +..++. +.++.+.+|+..... . ..
T Consensus 75 d~~v~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~s~~---g~~~~~-~~~~~i~~~~~~~~~--~-~~-- 134 (299)
T d1nr0a2 75 DDHLKVVPAGGSG-----------VDSSKAVANKLSSQPLGLAVSAD---GDIAVA-ACYKHIAIYSHGKLT--E-VP-- 134 (299)
T ss_dssp TTEEEEECSSSSS-----------SCTTSCCEEECSSCEEEEEECTT---SSCEEE-EESSEEEEEETTEEE--E-EE--
T ss_pred EEEEEEECCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCC---CCCCCC-CCCCCCCCCCCCCCC--C-CC--
T ss_conf 0268873167762-----------01110001111344321001122---111112-222222111111111--1-01--
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEE
Q ss_conf 88766389999699989999927993999968889643526503568831489645999975446899889999769939
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I 1367 (1553)
....+++++++|++.++++|+.+|.+.+||++...........+..+|..+.+ +|. +.++++++.++.|
T Consensus 135 -~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~-~~~---------~~~l~~~~~d~~i 203 (299)
T d1nr0a2 135 -ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAF-SNN---------GAFLVATDQSRKV 203 (299)
T ss_dssp -CSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEE-CTT---------SSEEEEEETTSCE
T ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC---------CCCCCCCCCCCCC
T ss_conf -11123322111111111111111111111111111111111111111111111-111---------1111111111111
Q ss_pred EEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-EE
Q ss_conf 99995888189998614689987667776323589988999863222445322223338999886681782338999-08
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DL 1446 (1553)
Q Consensus 1368 ~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~L 1446 (1553)
.+||+.++....... ....|...|++++|+|++ .+
T Consensus 204 ~~~~~~~~~~~~~~~--------------------------------------------~~~~h~~~v~~l~~s~~~~~l 239 (299)
T d1nr0a2 204 IPYSVANNFELAHTN--------------------------------------------SWTFHTAKVACVSWSPDNVRL 239 (299)
T ss_dssp EEEEGGGTTEESCCC--------------------------------------------CCCCCSSCEEEEEECTTSSEE
T ss_pred CCCCCCCCCCCCCCC--------------------------------------------CCCCCCCCCCCCCCCCCCCCE
T ss_conf 111111111111111--------------------------------------------111111111111246664513
Q ss_pred EECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 98169981999839999996497189988988984078860587099993205886402347888865201766887530
Q 000410 1447 LTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1526 (1553)
Q Consensus 1447 lTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1526 (1553)
++|+.|+.|++||+..+......... ..|...
T Consensus 240 ~sgs~dg~i~iwd~~~~~~~~~~~~~------------------------------------------------~~~~~~ 271 (299)
T d1nr0a2 240 ATGSLDNSVIVWNMNKPSDHPIIIKG------------------------------------------------AHAMSS 271 (299)
T ss_dssp EEEETTSCEEEEETTCTTSCCEEETT------------------------------------------------SSTTSC
T ss_pred EEECCCCEEEEEECCCCCCCEEEEEC------------------------------------------------CCCCCC
T ss_conf 88828997999989999731489834------------------------------------------------898896
Q ss_pred EEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 458752206981999980895289829
Q 000410 1527 ILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1527 I~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
|..+ .+ +++.+|+|++.||.|++|+
T Consensus 272 v~~~-~~-~~~~~l~s~s~D~~i~iWd 296 (299)
T d1nr0a2 272 VNSV-IW-LNETTIVSAGQDSNIKFWN 296 (299)
T ss_dssp EEEE-EE-EETTEEEEEETTSCEEEEE
T ss_pred EEEE-EE-CCCCEEEEEECCCEEEEEE
T ss_conf 8999-97-7989999992899799994
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8.6e-34 Score=251.35 Aligned_cols=330 Identities=12% Similarity=0.105 Sum_probs=225.6
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEE
Q ss_conf 44574599990799799999399959999489775333222203564179712899983298699998079939999933
Q 000410 1138 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVD 1217 (1553)
Q Consensus 1138 H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DGsI~iwdi~ 1217 (1553)
+.++|+|++|+||+.++|+|+.||.|+|||....+ +.....+.+|.+.|++++|+|+++.|++|+.||+|++|+++
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~----~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~ 81 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 81 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCC----EEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEEC
T ss_conf 99883899998999999999488989999888997----89999955889988899997999999999799939998620
Q ss_pred ECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEE--CCCCCCCCEEE
Q ss_conf 1256888643345643421002699848999981279985039999958963999969989644300--05888766389
Q 000410 1218 HISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL--KAIPEEGYVSS 1295 (1553)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l--~~~~h~g~Its 1295 (1553)
... .........+...+.++.|+|+ ++.+++++.++.|++|++......... ....|.+.|++
T Consensus 82 ~~~------------~~~~~~~~~~~~~v~~i~~~p~---~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~ 146 (371)
T d1k8kc_ 82 GRT------------WKPTLVILRINRAARCVRWAPN---EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 146 (371)
T ss_dssp TTE------------EEEEEECCCCSSCEEEEEECTT---SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred CCC------------CCCCCCCCCCCCCCCCCCCCCC---CCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 332------------1100122322110001111111---2110000025763025442033433111001011122211
Q ss_pred EEECCCCCEEEEEECCCCEEEEECCCCCCCCEEE-----------------CCCCCCCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf 9996999899999279939999688896435265-----------------03568831489645999975446899889
Q 000410 1296 LVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ-----------------YSQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1296 i~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~-----------------~~~~~~I~~l~~~~p~~~~~~~s~~~~~i 1358 (1553)
++|+|++.+|++|+.||.+++||++......... ..+...+..+++ ++++..+
T Consensus 147 v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----------s~~g~~l 216 (371)
T d1k8kc_ 147 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF----------SANGSRV 216 (371)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE----------CSSSSEE
T ss_pred CCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEE----------ECCCCCC
T ss_conf 111111111000134767999840157643100122111111110112440476674789875----------1233210
Q ss_pred EEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99976993999995888189998614689987667776323589988999863222445322223338999886681782
Q 000410 1359 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438 (1553)
Q Consensus 1359 ~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1438 (1553)
++++.|+.|.+||+.++.+...+..+. ..|+++
T Consensus 217 ~s~~~d~~i~iwd~~~~~~~~~~~~~~-----------------------------------------------~~v~s~ 249 (371)
T d1k8kc_ 217 AWVSHDSTVCLADADKKMAVATLASET-----------------------------------------------LPLLAV 249 (371)
T ss_dssp EEEETTTEEEEEEGGGTTEEEEEECSS-----------------------------------------------CCEEEE
T ss_pred CCCCCCCCCEEEEEECCCCEEEEECCC-----------------------------------------------CCCEEE
T ss_conf 000147860588641012100000146-----------------------------------------------652036
Q ss_pred CCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 33899908981699819998399999964971899889889840788605870999932058864023478888652017
Q 000410 1439 LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATD 1518 (1553)
Q Consensus 1439 ~~sp~g~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1518 (1553)
+|+|++.++++|.|+.+++|+...........+..... ... ............+ .... ............
T Consensus 250 ~fs~d~~~la~g~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~ 319 (371)
T d1k8kc_ 250 TFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVP---KQS-SQRGLTARERFQN-LDKK-----ASSEGSAAAGAG 319 (371)
T ss_dssp EEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC------------CHHHHHHH-CCCC-----C---------CC
T ss_pred EECCCCCEEEEECCCCEEEEEEECCCCEEEEEEEECCC---CCC-CCCCCCCEEEEEC-CCCE-----EEEECCCCCCCE
T ss_conf 54699979999819926787760898628872020676---542-1246220016850-6520-----587124556614
Q ss_pred CCCCCCCCEEEEEEEECC---CCEEEEECCCCEEEECC
Q ss_conf 668875304587522069---81999980895289829
Q 000410 1519 SAGCHRDSILSLGSVKLN---QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1519 ~~~~H~d~I~~ia~~~~~---~~~LvSas~DG~IkVWk 1553 (1553)
....|.+.|++++.+... ...++|+|.||.|+||+
T Consensus 320 ~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~ 357 (371)
T d1k8kc_ 320 LDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 357 (371)
T ss_dssp CSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred ECCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEE
T ss_conf 12555698899999489986567999991899399996
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9e-34 Score=251.24 Aligned_cols=291 Identities=12% Similarity=0.134 Sum_probs=200.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEE
Q ss_conf 24457459999079979999939995999948977533322220356417971289998329869999807993999993
Q 000410 1137 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1216 (1553)
Q Consensus 1137 ~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DGsI~iwdi 1216 (1553)
.+++.+..++++|+++.|+.++ ++.+.+||+..++ ....+.+|...|+|++|+|+++.|++|+.||+|++|++
T Consensus 15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~------~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~ 87 (311)
T d1nr0a1 15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLT------DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87 (311)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSS------CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEES
T ss_pred CCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCC------EEEEECCCCCCEEEEEEECCCCEEECCCCCCEEEEEEE
T ss_conf 7788759999969989999996-9999999999996------61797478888899999489996722556736746631
Q ss_pred EECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEEC--CCEEEEEECCCCCCCCEECCCCCCCCEE
Q ss_conf 31256888643345643421002699848999981279985039999958--9639999699896443000588876638
Q 000410 1217 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ--NCGIHLWDTRSNSNTWTLKAIPEEGYVS 1294 (1553)
Q Consensus 1217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~--dg~I~iwDlrt~~~~~~l~~~~h~g~It 1294 (1553)
.... .........+...+.+++|+++ ++++++++. +..+++||+.+++...++.. |.+.|+
T Consensus 88 ~~~~------------~~~~~~~~~~~~~v~~v~~s~d---~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~--h~~~v~ 150 (311)
T d1nr0a1 88 TQTT------------HILKTTIPVFSGPVKDISWDSE---SKRIAAVGEGRERFGHVFLFDTGTSNGNLTG--QARAMN 150 (311)
T ss_dssp SSTT------------CCEEEEEECSSSCEEEEEECTT---SCEEEEEECCSSCSEEEEETTTCCBCBCCCC--CSSCEE
T ss_pred ECCC------------CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCC
T ss_conf 0111------------1000013433575433233311---1000111122111111111111111111111--111111
Q ss_pred EEEECCCCCE-EEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECC
Q ss_conf 9999699989-999927993999968889643526503568831489645999975446899889999769939999958
Q 000410 1295 SLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1373 (1553)
Q Consensus 1295 si~~sp~g~~-LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~ 1373 (1553)
+++|+|++.+ +++|+.||.|++||++.......+.. +..+|.++.+ +|. +.++++++.|+.+.+||..
T Consensus 151 ~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~-~~~~i~~v~~-~p~---------~~~l~~~~~d~~v~~~d~~ 219 (311)
T d1nr0a1 151 SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRY-NPD---------GSLFASTGGDGTIVLYNGV 219 (311)
T ss_dssp EEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECC-CSSCEEEEEE-CTT---------SSEEEEEETTSCEEEEETT
T ss_pred CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC-CCC---------CCCCCCCCCCCCCCCCCCC
T ss_conf 1111211101200011221111111111111111111-1111111234-764---------2212111111111000124
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-EEEECCCC
Q ss_conf 88189998614689987667776323589988999863222445322223338999886681782338999-08981699
Q 000410 1374 NGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTD 1452 (1553)
Q Consensus 1374 tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~LlTgg~D 1452 (1553)
++.....+..... ...+|...|++++|+|++ .|+||+.|
T Consensus 220 ~~~~~~~~~~~~~----------------------------------------~~~~h~~~V~~~~~s~~~~~l~tgs~D 259 (311)
T d1nr0a1 220 DGTKTGVFEDDSL----------------------------------------KNVAHSGSVFGLTWSPDGTKIASASAD 259 (311)
T ss_dssp TCCEEEECBCTTS----------------------------------------SSCSSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCCCCCCCCC----------------------------------------CCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 4641122211111----------------------------------------110024653210247889999999379
Q ss_pred CEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf 81999839999996497189988988984078860587099993205886402347888865201766887530458752
Q 000410 1453 LKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGS 1532 (1553)
Q Consensus 1453 g~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~ 1532 (1553)
+.|++||+.+++....+.... .+...+.++
T Consensus 260 g~v~iwd~~t~~~~~~l~~~~------------------------------------------------~~~~~~~~~-- 289 (311)
T d1nr0a1 260 KTIKIWNVATLKVEKTIPVGT------------------------------------------------RIEDQQLGI-- 289 (311)
T ss_dssp SEEEEEETTTTEEEEEEECCS------------------------------------------------SGGGCEEEE--
T ss_pred CEEEEEECCCCCEEEEEECCC------------------------------------------------CCCCEEEEE--
T ss_conf 969999999996999997999------------------------------------------------863329999--
Q ss_pred EECCCCEEEEECCCCEEEECC
Q ss_conf 206981999980895289829
Q 000410 1533 VKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1533 ~~~~~~~LvSas~DG~IkVWk 1553 (1553)
...+..|++++.||.|++|+
T Consensus 290 -~~~~~~l~s~s~dG~i~~wd 309 (311)
T d1nr0a1 290 -IWTKQALVSISANGFINFVN 309 (311)
T ss_dssp -EECSSCEEEEETTCCEEEEE
T ss_pred -EECCCEEEEEECCCEEEEEE
T ss_conf -95199999998999799995
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=5.3e-32 Score=238.64 Aligned_cols=261 Identities=11% Similarity=0.095 Sum_probs=206.9
Q ss_pred CCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE
Q ss_conf 8555-753754502244574599990799799999399959999489775333222203564179712899983298699
Q 000410 1124 GWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~p-~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~l 1202 (1553)
.|+. .+.....+.+|.+.|++++|+|++++||||+.||+|+|||+...... ....+..|.+.|.+++|+++++.+
T Consensus 42 i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~----~~~~~~~~~~~v~~v~~s~d~~~l 117 (311)
T d1nr0a1 42 TVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI----LKTTIPVFSGPVKDISWDSESKRI 117 (311)
T ss_dssp EEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC----EEEEEECSSSCEEEEEECTTSCEE
T ss_pred EEECCCCCEEEEECCCCCCEEEEEEECCCCEEECCCCCCEEEEEEEECCCCC----CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999661797478888899999489996722556736746631011110----000134335754332333111000
Q ss_pred EEEEC--CCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 99807--9939999933125688864334564342100269984899998127998503999995896399996998964
Q 000410 1203 VVGAC--DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1203 vs~s~--DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~ 1280 (1553)
++++. +..+++|++++.. .......|...+.+++|+|++ ...+++++.|+.|++||+++++.
T Consensus 118 ~~~~~~~~~~~~v~~~~~~~--------------~~~~l~~h~~~v~~v~~~~~~--~~~l~sgs~d~~i~i~d~~~~~~ 181 (311)
T d1nr0a1 118 AAVGEGRERFGHVFLFDTGT--------------SNGNLTGQARAMNSVDFKPSR--PFRIISGSDDNTVAIFEGPPFKF 181 (311)
T ss_dssp EEEECCSSCSEEEEETTTCC--------------BCBCCCCCSSCEEEEEECSSS--SCEEEEEETTSCEEEEETTTBEE
T ss_pred CCCCCCCCCCCCCCCCCCCC--------------CCCCCCCCCCCCCCCCCCCCC--EEEECCCCCCCCCCCCCCCCCCC
T ss_conf 11112211111111111111--------------111111111111111112111--01200011221111111111111
Q ss_pred CCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECC------CCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 430005888766389999699989999927993999968889643526503------56883148964599997544689
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS------QVCPIEKMCLFVPPPNAAVSTTA 1354 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~------~~~~I~~l~~~~p~~~~~~~s~~ 1354 (1553)
...+.. |...|++++++|+++++++|+.||.+++||++.+..+..+... |..+|.++.+ +|+
T Consensus 182 ~~~~~~--~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~-s~~--------- 249 (311)
T d1nr0a1 182 KSTFGE--HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTW-SPD--------- 249 (311)
T ss_dssp EEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEE-CTT---------
T ss_pred CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC---------
T ss_conf 111111--11111112347642212111111111000124464112221111111002465321024-788---------
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98899997699399999588818999861468998766777632358998899986322244532222333899988668
Q 000410 1355 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1434 (1553)
Q Consensus 1355 ~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1434 (1553)
+.++++++.|+.|++||++++++.+.+..+.. ....
T Consensus 250 ~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~--------------------------------------------~~~~ 285 (311)
T d1nr0a1 250 GTKIASASADKTIKIWNVATLKVEKTIPVGTR--------------------------------------------IEDQ 285 (311)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSS--------------------------------------------GGGC
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEECCCC--------------------------------------------CCCE
T ss_conf 99999993799699999999969999979998--------------------------------------------6332
Q ss_pred CEEECCCCCCEEEECCCCCEEEEEECC
Q ss_conf 178233899908981699819998399
Q 000410 1435 IRSLLPLPGGDLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1435 V~sl~~sp~g~LlTgg~Dg~IrlWDl~ 1461 (1553)
+.++.|+++ .+++++.||.|++||.+
T Consensus 286 ~~~~~~~~~-~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 286 QLGIIWTKQ-ALVSISANGFINFVNPE 311 (311)
T ss_dssp EEEEEECSS-CEEEEETTCCEEEEETT
T ss_pred EEEEEECCC-EEEEEECCCEEEEEECC
T ss_conf 999995199-99999899979999588
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.7e-31 Score=235.07 Aligned_cols=304 Identities=17% Similarity=0.181 Sum_probs=158.6
Q ss_pred CCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE
Q ss_conf 8555-753754502244574599990799799999399959999489775333222203564179712899983298699
Q 000410 1124 GWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~p-~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~l 1202 (1553)
.|+. .|+++.++.+|.++|++++|+|+ .+|+||+.||+|++|+........ ......+........+.+++..+
T Consensus 37 vWd~~~~~~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 111 (355)
T d1nexb2 37 VYDSINKKFLLQLSGHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTH----VFEGHNSTVRCLDIVEYKNIKYI 111 (355)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEE----EECCCSSCEEEEEEEEETTEEEE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEECCC-CEEEEEECCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 9989999399999789998899998699-999999645244321111111111----11001111111111111232204
Q ss_pred EEEECCCCEEEEEEEECCCCCCCCCCC---------CCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEE
Q ss_conf 998079939999933125688864334---------56434210026998489999812799850399999589639999
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKY---------SGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLW 1273 (1553)
Q Consensus 1203 vs~s~DGsI~iwdi~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iw 1273 (1553)
++++.||.|++|++............. ............+...+.. +.++ ++.++.+..|+.|++|
T Consensus 112 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~---~~~~~~~~~d~~i~~~ 186 (355)
T d1nexb2 112 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT--VSGH---GNIVVSGSYDNTLIVW 186 (355)
T ss_dssp EEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEE--EEEE---TTEEEEEETTSCEEEE
T ss_pred EEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEEEECCCCCCC--CCCC---CCEEEEECCCCEEEEE
T ss_conf 5543888689998567730012465200010000011234012101100222100--0025---6334421144204443
Q ss_pred ECCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 69989644300058887663899996999899999279939999688896435265035688314896459999754468
Q 000410 1274 DTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTT 1353 (1553)
Q Consensus 1274 Dlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~ 1353 (1553)
|+++++....... +...+.++.+++++.++++|+.||.+++||++.+..+..+.. |..+|..+.+ .
T Consensus 187 d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~-h~~~v~~~~~-~---------- 252 (355)
T d1nexb2 187 DVAQMKCLYILSG--HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQG-HTALVGLLRL-S---------- 252 (355)
T ss_dssp ETTTTEEEEEECC--CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECC-CSSCCCEEEE-C----------
T ss_pred ECCCCCCEEEEEC--CCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCC-CCCCCCCCCC-C----------
T ss_conf 0131100011000--123321111112100210124563687630122111111111-1111111123-2----------
Q ss_pred CCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99889999769939999958881899986146899876677763235899889998632224453222233389998866
Q 000410 1354 ARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLL 1433 (1553)
Q Consensus 1354 ~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1433 (1553)
+.++++++.|+.|++||+.++....... . .
T Consensus 253 -~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~-----------------------------------------------~ 282 (355)
T d1nexb2 253 -DKFLVSAAADGSIRGWDANDYSRKFSYH--H-----------------------------------------------T 282 (355)
T ss_dssp -SSEEEEECTTSEEEEEETTTCCEEEEEE--C-----------------------------------------------T
T ss_pred -CCEEEEEECCCCCCCCCCCCCCEECCCC--C-----------------------------------------------C
T ss_conf -1003332011111111111111000124--6-----------------------------------------------8
Q ss_pred CCEEE-CCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHH
Q ss_conf 81782-33899908981699819998399999964971899889889840788605870999932058864023478888
Q 000410 1434 GIRSL-LPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVL 1512 (1553)
Q Consensus 1434 ~V~sl-~~sp~g~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 1512 (1553)
.+.++ .+++++.++++|.|+.|++||+++++...
T Consensus 283 ~~~~~~~~~~~~~~l~~g~d~~i~vwd~~tg~~~~--------------------------------------------- 317 (355)
T d1nexb2 283 NLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVH--------------------------------------------- 317 (355)
T ss_dssp TCCCCCEEEECSSEEEEEETTEEEEEETTTCCBCC---------------------------------------------
T ss_pred CCEEEEEECCCCCEEEEEECCEEEEEECCCCCEEE---------------------------------------------
T ss_conf 82299998499989999809979999999997988---------------------------------------------
Q ss_pred HHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 65201766887530458752206981999980895289829
Q 000410 1513 AAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1513 ~~~~~~~~~~H~d~I~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
....+|.+.|+++ .|+++ .+++++++||.++||.
T Consensus 318 -----~~~~~~~~~V~~v-~~~~~-~~~~~~s~dg~~~l~~ 351 (355)
T d1nexb2 318 -----ANILKDADQIWSV-NFKGK-TLVAAVEKDGQSFLEI 351 (355)
T ss_dssp -----SCTTTTCSEEEEE-EEETT-EEEEEEESSSCEEEEE
T ss_pred -----EEECCCCCCEEEE-EECCC-EEEEEEECCCCEEEEE
T ss_conf -----8845899989999-98399-1999998989099999
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-31 Score=233.27 Aligned_cols=308 Identities=18% Similarity=0.228 Sum_probs=215.6
Q ss_pred CC-CCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEE
Q ss_conf 55-57537545022445745999907997999993999599994897753332222035641797128999832986999
Q 000410 1125 WR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVV 1203 (1553)
Q Consensus 1125 W~-p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lv 1203 (1553)
|+ ...++...|+||.++|.+ ++++++++|+|||.||+|+|||+.+++ ...++.+|.+.|.+++|.+ +.++
T Consensus 1 W~~~~~~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~------~~~~~~~h~~~V~~v~~~~--~~l~ 71 (342)
T d2ovrb2 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK------CLRTLVGHTGGVWSSQMRD--NIII 71 (342)
T ss_dssp HHHSCCCCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC------EEEECCCCSSCEEEEEEET--TEEE
T ss_pred CCCCCCCCCEEECCCCCCEEE-EEEECCCEEEEEECCCEEEEEECCCCC------EEEEEECCCCCEEEEEECC--CCCC
T ss_conf 989988758898886875099-999789999999189909999899997------9999948899989999479--8632
Q ss_pred EEECCCCEEEEEEEECCCCCC------CCCCC----------CCCCCCEECCCCCCCEEEEE--------EECCCCCCCE
Q ss_conf 980799399999331256888------64334----------56434210026998489999--------8127998503
Q 000410 1204 VGACDGIIHMFSVDHISRGLG------NVEKY----------SGISDIKKKDTKEGAIVTLV--------NYNTDNCASH 1259 (1553)
Q Consensus 1204 s~s~DGsI~iwdi~~~~~~~~------~~~~~----------~~~~~~~~~~~~~~~~v~~i--------~~~~~~~s~~ 1259 (1553)
+|+.||++++|+......... ..... .....+..+....+...... ..... ..
T Consensus 72 s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 148 (342)
T d2ovrb2 72 SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYD---GR 148 (342)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEEC---SS
T ss_pred CCEECCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEECCC---CC
T ss_conf 100000111111110000000123330476520246522123444037874035563001110011110000013---33
Q ss_pred EEEEEECCCEEEEEECCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEE
Q ss_conf 99999589639999699896443000588876638999969998999992799399996888964352650356883148
Q 000410 1260 MFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKM 1339 (1553)
Q Consensus 1260 ~L~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l 1339 (1553)
.++.++.++.|++||++.......+.. |...+..+. +++..+++|+.||.|++||++...++..+.. +...+..+
T Consensus 149 ~~~~~~~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~--~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~-~~~~v~~~ 223 (342)
T d2ovrb2 149 RVVSGAYDFMVKVWDPETETCLHTLQG--HTNRVYSLQ--FDGIHVVSGSLDTSIRVWDVETGNCIHTLTG-HQSLTSGM 223 (342)
T ss_dssp CEEEEETTSCEEEEEGGGTEEEEEECC--CSSCEEEEE--ECSSEEEEEETTSCEEEEETTTCCEEEEECC-CCSCEEEE
T ss_pred EEEEECCCCEEEEEECCCCEEEEEECC--CCCCCCCCC--CCCCEEEEEECCCEEEEEECCCCEEEEEECC-CCCCEEEE
T ss_conf 024335898699952523436678727--544421006--8999999995899399952556536567416-65320577
Q ss_pred EEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 96459999754468998899997699399999588818999861468998766777632358998899986322244532
Q 000410 1340 CLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQK 1419 (1553)
Q Consensus 1340 ~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1419 (1553)
.+ . +.++++++.|+.|++||+...+....+....
T Consensus 224 ~~-~-----------~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~---------------------------------- 257 (342)
T d2ovrb2 224 EL-K-----------DNILVSGNADSTVKIWDIKTGQCLQTLQGPN---------------------------------- 257 (342)
T ss_dssp EE-E-----------TTEEEEEETTSCEEEEETTTCCEEEEECSTT----------------------------------
T ss_pred EC-C-----------CCEEEEECCCCEEEEEECCCCCCCCCCCCCC----------------------------------
T ss_conf 06-8-----------9999997489889998655442211122100----------------------------------
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEEC
Q ss_conf 22233389998866817823389990898169981999839999996497189988988984078860587099993205
Q 000410 1420 YRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKR 1499 (1553)
Q Consensus 1420 ~~~~~l~~~~~~~~~V~sl~~sp~g~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 1499 (1553)
.+...+.++.+++ ..+++|+.||.|++||+.+++..+.+....
T Consensus 258 ----------~~~~~~~~~~~~~-~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~-------------------------- 300 (342)
T d2ovrb2 258 ----------KHQSAVTCLQFNK-NFVITSSDDGTVKLWDLKTGEFIRNLVTLE-------------------------- 300 (342)
T ss_dssp ----------SCSSCEEEEEECS-SEEEEEETTSEEEEEETTTCCEEEEEEECT--------------------------
T ss_pred ----------EEEECEEECCCCC-CEEEEECCCCEEEEEECCCCCEEEEEECCC--------------------------
T ss_conf ----------0110100001379-844999089989999999997989986234--------------------------
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCE----EEECC
Q ss_conf 8864023478888652017668875304587522069819999808952----89829
Q 000410 1500 QPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGA----IKVWK 1553 (1553)
Q Consensus 1500 ~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvSas~DG~----IkVWk 1553 (1553)
..+|.+.|+++ .|++++.++++|++||+ |++|+
T Consensus 301 --------------------~~~~~~~v~~v-~~s~~~~~la~g~~dGt~~~~l~~~D 337 (342)
T d2ovrb2 301 --------------------SGGSGGVVWRI-RASNTKLVCAVGSRNGTEETKLLVLD 337 (342)
T ss_dssp --------------------TGGGTCEEEEE-EECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred --------------------CCCCCCCEEEE-EECCCCCEEEEEECCCCCEEEEEEEE
T ss_conf --------------------78988978999-98799989999968999704899993
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.2e-30 Score=223.12 Aligned_cols=245 Identities=11% Similarity=0.122 Sum_probs=202.3
Q ss_pred EEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCE
Q ss_conf 54502244574599990799799999399959999489775333222203564179712899983298699998079939
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DGsI 1211 (1553)
.....+|.+.|++++|+|++.+|++|+.||+|++||+..... +.......|...+.+++|++++..+++++.|+.|
T Consensus 90 ~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 165 (337)
T d1gxra_ 90 QLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP----RIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp EEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 764048899689999867998898861233211111111111----1111111111111111111111111111111111
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCCCCCC
Q ss_conf 99993312568886433456434210026998489999812799850399999589639999699896443000588876
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
++|++.+. ........+...+.+++|+++ +..+++++.++.|++||+++++.+..+. +.+
T Consensus 166 ~~~~~~~~--------------~~~~~~~~~~~~v~~l~~s~~---~~~~~~~~~d~~v~i~d~~~~~~~~~~~---~~~ 225 (337)
T d1gxra_ 166 AVWDLHNQ--------------TLVRQFQGHTDGASCIDISND---GTKLWTGGLDNTVRSWDLREGRQLQQHD---FTS 225 (337)
T ss_dssp EEEETTTT--------------EEEEEECCCSSCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEEEEEE---CSS
T ss_pred CCCCCCCC--------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCEEECCCC---CCC
T ss_conf 11111111--------------111111111111110123444---3211223566553211111100000246---666
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEE
Q ss_conf 63899996999899999279939999688896435265035688314896459999754468998899997699399999
Q 000410 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1371 (1553)
Q Consensus 1292 ~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iWD 1371 (1553)
.|++++|+|++.++++|+.+|.+++||++....... ..+..+|..+.+ +|+ +.++++++.|+.|++||
T Consensus 226 ~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~i~~v~~-s~~---------g~~l~s~s~Dg~i~iwd 293 (337)
T d1gxra_ 226 QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL--HLHESCVLSLKF-AYC---------GKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE--CCCSSCEEEEEE-CTT---------SSEEEEEETTSEEEEEE
T ss_pred CEEEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCC--CCCCCCCCEEEE-CCC---------CCEEEEEECCCEEEEEE
T ss_conf 157999715303000000256421111111110000--124565416999-899---------99999994899699998
Q ss_pred CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-EEEECC
Q ss_conf 5888189998614689987667776323589988999863222445322223338999886681782338999-089816
Q 000410 1372 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGG 1450 (1553)
Q Consensus 1372 i~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~LlTgg 1450 (1553)
+.++++...+. +...|++++|+|++ .|+||+
T Consensus 294 ~~~~~~~~~~~------------------------------------------------~~~~v~~~~~s~d~~~l~t~s 325 (337)
T d1gxra_ 294 TPYGASIFQSK------------------------------------------------ESSSVLSCDISVDDKYIVTGS 325 (337)
T ss_dssp TTTCCEEEEEE------------------------------------------------CSSCEEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEECC------------------------------------------------CCCCEEEEEEECCCCEEEEEE
T ss_conf 99997999926------------------------------------------------999879999927999999990
Q ss_pred CCCEEEEEEC
Q ss_conf 9981999839
Q 000410 1451 TDLKIRRWDH 1460 (1553)
Q Consensus 1451 ~Dg~IrlWDl 1460 (1553)
.|++|++||+
T Consensus 326 ~D~~I~vWdl 335 (337)
T d1gxra_ 326 GDKKATVYEV 335 (337)
T ss_dssp TTSCEEEEEE
T ss_pred CCCEEEEEEE
T ss_conf 8996999977
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.8e-29 Score=218.43 Aligned_cols=290 Identities=17% Similarity=0.230 Sum_probs=193.5
Q ss_pred EEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEE---EC----CCCEEEE
Q ss_conf 5450224457459999079979999939995999948977533322220356417971289998---32----9869999
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMM---LR----HSAQVVV 1204 (1553)
Q Consensus 1132 v~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f---~~----~~~~lvs 1204 (1553)
+....+|.+.|++++++ +++++|||.||+|+|||....+.............|...+..+.. .+ +...+++
T Consensus 7 ~~~~~~H~~~I~~v~~~--~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 84 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 84 (393)
T ss_dssp EEESSCSSSCEEEEEEC--SSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred EECCCCCCCCCEEEEEE--CCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEE
T ss_conf 52087636712799996--9999999799969987898788776540467654204771676667500157998768999
Q ss_pred EECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCC--CCCEEEEEEECCCEEEEEECCCCCCC-
Q ss_conf 807993999993312568886433456434210026998489999812799--85039999958963999969989644-
Q 000410 1205 GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDN--CASHMFMYSTQNCGIHLWDTRSNSNT- 1281 (1553)
Q Consensus 1205 ~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~s~~~L~~~s~dg~I~iwDlrt~~~~- 1281 (1553)
++.||.|++|++.......... .... .... ...+......+++.++. ..+.++++++.||.+.+||+......
T Consensus 85 ~~~dg~v~~w~~~~~~~~~~~~--~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~ 160 (393)
T d1sq9a_ 85 TSFSGDLLFYRITREDETKKVI--FEKL-DLLD-SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 160 (393)
T ss_dssp EETTSCEEEEEEEECTTTCCEE--EEEE-CCSC-TTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EECCCCEEEEECCCCCCEEEEE--CCCC-CEEE-ECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCC
T ss_conf 9489919999822898205651--2456-3243-1157896689998447886542179998389819998740477534
Q ss_pred --------------CEE-CCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC-----CCCCCCCEEEE
Q ss_conf --------------300-0588876638999969998999992799399996888964352650-----35688314896
Q 000410 1282 --------------WTL-KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY-----SQVCPIEKMCL 1341 (1553)
Q Consensus 1282 --------------~~l-~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~-----~~~~~I~~l~~ 1341 (1553)
... ....+...+++++|+|++ ++++|+.||+|++||++.+.++..+.. .|..+|.++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~ 239 (393)
T d1sq9a_ 161 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 239 (393)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred CEEEEEECCCEECCCCEECCCCCCCCEEEEEECCCC-EEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 102331032000145100025789867899978999-8999938982999860233211000011111242563877004
Q ss_pred ECCCCCCCCCCCCCCEEEEEECCC---EEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 459999754468998899997699---39999958881899986146899876677763235899889998632224453
Q 000410 1342 FVPPPNAAVSTTARPLIYVAAGCN---EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQ 1418 (1553)
Q Consensus 1342 ~~p~~~~~~~s~~~~~i~s~s~dg---~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 1418 (1553)
+|+ +.++++++.|+ .|++||++++++...+.......
T Consensus 240 -spd---------g~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~------------------------------ 279 (393)
T d1sq9a_ 240 -SPQ---------GSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSS------------------------------ 279 (393)
T ss_dssp -CSS---------TTEEEEEEEETTEEEEEEEETTTCCEEEEECBC----------------------------------
T ss_pred -CCC---------CCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCC------------------------------
T ss_conf -665---------3201124289884210010353213444311566664------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCC-EEEECCCCCEEEEEECCCCCCCEEEECC
Q ss_conf 22223338999886681782338999-0898169981999839999996497189
Q 000410 1419 KYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGP 1472 (1553)
Q Consensus 1419 ~~~~~~l~~~~~~~~~V~sl~~sp~g-~LlTgg~Dg~IrlWDl~~~~~s~~i~g~ 1472 (1553)
.......+|...|++++|+|++ .|+|||.|++||+||+.+++...++.|.
T Consensus 280 ----~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH 330 (393)
T d1sq9a_ 280 ----QASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 330 (393)
T ss_dssp --------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred ----CCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCC
T ss_conf ----310232023586660013898880698779998999999999799999886
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.5e-29 Score=221.31 Aligned_cols=250 Identities=16% Similarity=0.217 Sum_probs=193.5
Q ss_pred EEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCE
Q ss_conf 54502244574599990799799999399959999489775333222203564179712899983298699998079939
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DGsI 1211 (1553)
.....+|...|++++|+|++.+|++|+.||+|++||...++ ......+|...|.++.+.+++..+++++.+|.+
T Consensus 114 ~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i 187 (388)
T d1erja_ 114 TSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTV 187 (388)
T ss_dssp -----CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTE------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 10146778988999988999801213444111121111111------111111111111110111111111122210156
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECC-----
Q ss_conf 999933125688864334564342100269984899998127998503999995896399996998964430005-----
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA----- 1286 (1553)
Q Consensus 1212 ~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~----- 1286 (1553)
++|+.... ........+...+....+.++ +.++++++.|+.|++||.+++.....+..
T Consensus 188 ~~~d~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~ 250 (388)
T d1erja_ 188 RIWDLRTG--------------QCSLTLSIEDGVTTVAVSPGD---GKYIAAGSLDRAVRVWDSETGFLVERLDSENESG 250 (388)
T ss_dssp EEEETTTT--------------EEEEEEECSSCEEEEEECSTT---CCEEEEEETTSCEEEEETTTCCEEEEEC------
T ss_pred EEEECCCC--------------CCCCCCCCCCCCCCCCCCCCC---CCEEEEECCCCEEEEEECCCCCCCEEECCCCCCC
T ss_conf 54101111--------------110000124544211236887---8758997389819996345573000102443334
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC-----------CCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 88876638999969998999992799399996888964352650-----------3568831489645999975446899
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY-----------SQVCPIEKMCLFVPPPNAAVSTTAR 1355 (1553)
Q Consensus 1287 ~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~-----------~~~~~I~~l~~~~p~~~~~~~s~~~ 1355 (1553)
..|.+.|++++|+|++.+|++|+.||.+++||++.......... .+...|.++.+ ++++
T Consensus 251 ~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----------s~~~ 320 (388)
T d1erja_ 251 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT----------TQND 320 (388)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEE----------CGGG
T ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEE----------CCCC
T ss_conf 577898789999799999999978992898751577643210134442001101245532789998----------8999
Q ss_pred CEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88999976993999995888189998614689987667776323589988999863222445322223338999886681
Q 000410 1356 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1356 ~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
.++++|+.||.|++||++++++...+..+.. .|
T Consensus 321 ~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~-----------------------------------------------~V 353 (388)
T d1erja_ 321 EYILSGSKDRGVLFWDKKSGNPLLMLQGHRN-----------------------------------------------SV 353 (388)
T ss_dssp CEEEEEETTSEEEEEETTTCCEEEEEECCSS-----------------------------------------------CE
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEECCCC-----------------------------------------------CE
T ss_conf 9999996989799999999969999968899-----------------------------------------------78
Q ss_pred EEE------CCCCCC-EEEECCCCCEEEEEECC
Q ss_conf 782------338999-08981699819998399
Q 000410 1436 RSL------LPLPGG-DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1436 ~sl------~~sp~g-~LlTgg~Dg~IrlWDl~ 1461 (1553)
.++ .|+|++ .|+||+.||+|++||++
T Consensus 354 ~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 354 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp EEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEEEEECCCCCCCCCCEEEEEECCCEEEEEEEE
T ss_conf 999984674258999999999189979997621
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=3.6e-30 Score=225.62 Aligned_cols=304 Identities=13% Similarity=0.145 Sum_probs=205.9
Q ss_pred CCCCCC-C--CEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCC
Q ss_conf 885557-5--3754502244574599990799799999399959999489775333222203564179712899983298
Q 000410 1123 SGWRPR-G--ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1123 ~~W~p~-G--~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~ 1199 (1553)
..|+.. + .++..|.+|.++|++++|+|++.+|+|||.||+|+|||+..... ........|...|++++|.|++
T Consensus 32 ~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~----~~~~~~~~~~~~v~~i~~~p~~ 107 (371)
T d1k8kc_ 32 HIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW----KPTLVILRINRAARCVRWAPNE 107 (371)
T ss_dssp EEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE----EEEEECCCCSSCEEEEEECTTS
T ss_pred EEEECCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCC----CCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999888997899999558899888999979999999997999399986203321----1001223221100011111112
Q ss_pred CEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCC
Q ss_conf 69999807993999993312568886433456434210026998489999812799850399999589639999699896
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1279 (1553)
Q Consensus 1200 ~~lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~ 1279 (1553)
+.|++++.||++++|+++... ...........+...+.+++|+|+ +.++++++.|+.|++||+....
T Consensus 108 ~~l~~~s~d~~i~i~~~~~~~----------~~~~~~~~~~~~~~~v~~v~~~p~---~~~l~s~s~D~~v~v~~~~~~~ 174 (371)
T d1k8kc_ 108 KKFAVGSGSRVISICYFEQEN----------DWWVCKHIKKPIRSTVLSLDWHPN---SVLLAAGSCDFKCRIFSAYIKE 174 (371)
T ss_dssp SEEEEEETTSSEEEEEEETTT----------TEEEEEEECTTCCSCEEEEEECTT---SSEEEEEETTSCEEEEECCCTT
T ss_pred CCCEEECCCCCCEEEEEECCC----------CCCCCCCCCCCCCCCCCCCCCCCC---CCCEECCCCCCEEEEEEECCCC
T ss_conf 110000025763025442033----------433111001011122211111111---1110001347679998401576
Q ss_pred CC----------------CEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEC
Q ss_conf 44----------------30005888766389999699989999927993999968889643526503568831489645
Q 000410 1280 NT----------------WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFV 1343 (1553)
Q Consensus 1280 ~~----------------~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~ 1343 (1553)
.. .......|.+.|++++|+|+++.+++|+.||.+++||++.+..+..+.. +..+|.++.| .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~v~s~~f-s 252 (371)
T d1k8kc_ 175 VEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS-ETLPLLAVTF-I 252 (371)
T ss_dssp TSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC-SSCCEEEEEE-E
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEC-CCCCCEEEEE-C
T ss_conf 4310012211111111011244047667478987512332100001478605886410121000001-4665203654-6
Q ss_pred CCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999754468998899997699399999588818999861468998-7667776-3235899889998632224453222
Q 000410 1344 PPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGD-TEMSDLP-WAFARPSSRSNPKTDLRRNVNQKYR 1421 (1553)
Q Consensus 1344 p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~-~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~ 1421 (1553)
|+. .++ +++.|+.+.+|..........+........ ....... ......... .. ......
T Consensus 253 ~d~---------~~l-a~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~ 314 (371)
T d1k8kc_ 253 TES---------SLV-AAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK-------KA-SSEGSA 314 (371)
T ss_dssp ETT---------EEE-EEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCC-------CC-------
T ss_pred CCC---------CEE-EEECCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCC-------EE-EEECCC
T ss_conf 999---------799-998199267877608986288720206765421246220016850652-------05-871245
Q ss_pred CCCCCCCCCCCCCCEEECCCCCC-----EEEECCCCCEEEEEECCCC
Q ss_conf 23338999886681782338999-----0898169981999839999
Q 000410 1422 VDELNEPPPRLLGIRSLLPLPGG-----DLLTGGTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1422 ~~~l~~~~~~~~~V~sl~~sp~g-----~LlTgg~Dg~IrlWDl~~~ 1463 (1553)
.........|...|+++++.+.+ .++|+|.||.|++||+++.
T Consensus 315 ~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~ 361 (371)
T d1k8kc_ 315 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 361 (371)
T ss_dssp ---CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred CCCCEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCC
T ss_conf 56614125556988999994899865679999918993999969868
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.5e-29 Score=216.72 Aligned_cols=227 Identities=11% Similarity=0.116 Sum_probs=90.9
Q ss_pred EEECCCCC-CCEEEEEECC--CCCEEEEEECCCCEEEEECCCCCCCCCC--CCCEEEECCCCCEEEEEEECCCCEEEEEE
Q ss_conf 54502244-5745999907--9979999939995999948977533322--22035641797128999832986999980
Q 000410 1132 VAHLQEHC-SAVNEIAISH--DHSFFVSASDDSTVKVWDSRKLEKDISF--RSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1132 v~~l~~H~-~~V~~i~~sp--d~~~laSgS~DGtVkIWD~~~~~~~~~~--~~~~t~~~h~~~I~~i~f~~~~~~lvs~s 1206 (1553)
+..+.+|. ..|++++|+| ++.+++||+.||+|+|||+......... .....+..|.+.|.+++|++++..+++++
T Consensus 55 ~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~ 134 (325)
T d1pgua1 55 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVG 134 (325)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEE
T ss_conf 28990789998899998117999799999489977985405886215651002541136567377999899988220100
Q ss_pred C--CCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEE
Q ss_conf 7--99399999331256888643345643421002699848999981279985039999958963999969989644300
Q 000410 1207 C--DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1207 ~--DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
. ++.+++|+.++.. .+. ....|...+.+++|++++ ...+++++.|+.|++||++..+.....
T Consensus 135 ~~~~~~~~~~~~~~~~-------------~~~-~~~~h~~~v~~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~~~~ 198 (325)
T d1pgua1 135 EGRDNFGVFISWDSGN-------------SLG-EVSGHSQRINACHLKQSR--PMRSMTVGDDGSVVFYQGPPFKFSASD 198 (325)
T ss_dssp CCSSCSEEEEETTTCC-------------EEE-ECCSCSSCEEEEEECSSS--SCEEEEEETTTEEEEEETTTBEEEEEE
T ss_pred CCCCCEEEEEEECCCC-------------CCE-EEEECCCCCCCCCCCCCC--CCEEEEEECCCCCCCCCCCCCCCCEEC
T ss_conf 1244047888502331-------------100-120012343211112343--206888621112211112211000000
Q ss_pred CC-CCCCCCEEEEEECCC-CCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEE
Q ss_conf 05-888766389999699-9899999279939999688896435265035688314896459999754468998899997
Q 000410 1285 KA-IPEEGYVSSLVTGPC-GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1362 (1553)
Q Consensus 1285 ~~-~~h~g~Itsi~~sp~-g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s 1362 (1553)
.. ..|.+.|++++|+|+ +.++++|+.||.|++||++.+..+..+.. |..++..+.+ ... .+++.++++++
T Consensus 199 ~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~-~~~~v~~~~~-s~~------~~dg~~l~s~s 270 (325)
T d1pgua1 199 RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIED-DQEPVQGGIF-ALS------WLDSQKFATVG 270 (325)
T ss_dssp CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCB-TTBCCCSCEE-EEE------ESSSSEEEEEE
T ss_pred CCCCCCCCCCEEEEECCCCCEECCCCCCCCCEEEEEECCCCCCCCCCC-CCCCCCCCEE-EEE------CCCCCEEEEEE
T ss_conf 001577775277630345310000112332101343001222111111-1111111000-000------36899999995
Q ss_pred CCCEEEEEECCCCCEEEEEE
Q ss_conf 69939999958881899986
Q 000410 1363 GCNEVSLWNAENGSCHQVLR 1382 (1553)
Q Consensus 1363 ~dg~I~iWDi~tg~~~~~l~ 1382 (1553)
.|+.|++||++++++...+.
T Consensus 271 ~D~~i~iwd~~~~~~~~~~~ 290 (325)
T d1pgua1 271 ADATIRVWDVTTSKCVQKWT 290 (325)
T ss_dssp TTSEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEE
T ss_conf 89939999999997889999
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-29 Score=221.53 Aligned_cols=311 Identities=13% Similarity=0.091 Sum_probs=208.9
Q ss_pred CEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECC-CCEEEEEECC
Q ss_conf 375450224457459999079979999939995999948977533322220356417971289998329-8699998079
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACD 1208 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~-~~~lvs~s~D 1208 (1553)
++|...++|++.|++|+|+|++.+|||||.||+|+|||+....... .......|.+.|+|++|+++ +..+++|+.|
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~---~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d 78 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV---DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ 78 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE---EEEEEEECSSCEEEEEEEESSSEEEEEEETT
T ss_pred CEEECCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCCCE---EEEEECCCCCCEEEEEEECCCCCEEEECCCC
T ss_conf 7597688998978889995899999999799929999756998636---8988558999889999958999789981265
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEC---
Q ss_conf 93999993312568886433456434210026998489999812799850399999589639999699896443000---
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK--- 1285 (1553)
Q Consensus 1209 GsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~--- 1285 (1553)
|.|++|++.... ........+........+.++ ...+++++.++.+++||++.+.......
T Consensus 79 ~~v~~w~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~ 142 (342)
T d1yfqa_ 79 GEILKVDLIGSP-------------SFQALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNL 142 (342)
T ss_dssp SCEEEECSSSSS-------------SEEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEES
T ss_pred CCEEEEECCCCC-------------CCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCEEECCCCCCCEEEECCC
T ss_conf 311454204432-------------000001111111111111111---1111110122211102023444330230002
Q ss_pred -CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCC--CCCCCEEEEECCCCCCCCCCCCCCEEEEEE
Q ss_conf -58887663899996999899999279939999688896435265035--688314896459999754468998899997
Q 000410 1286 -AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ--VCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1362 (1553)
Q Consensus 1286 -~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~--~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s 1362 (1553)
..........+.+.+.+..+++|+.||.+++||++............ ...+..... .+ .++..+++++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~s 213 (342)
T d1yfqa_ 143 NSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL-LP--------KEQEGYACSS 213 (342)
T ss_dssp CSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE-CS--------GGGCEEEEEE
T ss_pred CCCCCCCEEEEEEEECCCCCEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEE-EC--------CCCCEEEEEC
T ss_conf 43001200000100016870246517984788760567634111210254221014676-36--------9998788654
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 69939999958881899986146899876677763235899889998632224453222233389998866817823389
Q 000410 1363 GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP 1442 (1553)
Q Consensus 1363 ~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp 1442 (1553)
.+|.+.+|++.......... .. . .............+...|++++|+|
T Consensus 214 ~dg~~~v~~~~~~~~~~~~~-----~~-----~----------------------~~~~~~~~~~~~~~~~~v~~l~~sp 261 (342)
T d1yfqa_ 214 IDGRVAVEFFDDQGDDYNSS-----KR-----F----------------------AFRCHRLNLKDTNLAYPVNSIEFSP 261 (342)
T ss_dssp TTSEEEEEECCTTCCSTTCT-----TC-----E----------------------EEECCCCCTTCCSSCCCEEEEEECT
T ss_pred CCCEEEEEEECCCCCEEECC-----CC-----C----------------------EEEEEEECCCCCCCCCCCEEEEECC
T ss_conf 89959999805986401112-----35-----1----------------------2565553147776235431599669
Q ss_pred CC-EEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 99-08981699819998399999964971899889889840788605870999932058864023478888652017668
Q 000410 1443 GG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAG 1521 (1553)
Q Consensus 1443 ~g-~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1521 (1553)
++ .|+|||.||.|++||+.+.+....+..
T Consensus 262 ~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~-------------------------------------------------- 291 (342)
T d1yfqa_ 262 RHKFLYTAGSDGIISCWNLQTRKKIKNFAK-------------------------------------------------- 291 (342)
T ss_dssp TTCCEEEEETTSCEEEEETTTTEEEEECCC--------------------------------------------------
T ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEECC--------------------------------------------------
T ss_conf 844799987999899999998949887058--------------------------------------------------
Q ss_pred CCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 87530458752206981999980895289829
Q 000410 1522 CHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1522 ~H~d~I~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|...+ + .|++++.++++|+.|+.+++|+
T Consensus 292 ~~~~~~--~-~~s~~~~~l~~a~sdd~~~~~~ 320 (342)
T d1yfqa_ 292 FNEDSV--V-KIACSDNILCLATSDDTFKTNA 320 (342)
T ss_dssp CSSSEE--E-EEEECSSEEEEEEECTHHHHCS
T ss_pred CCCCEE--E-EEEECCCEEEEEECCCCEEEEE
T ss_conf 999879--9-9994799999999199278830
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=1.2e-29 Score=221.91 Aligned_cols=272 Identities=14% Similarity=0.176 Sum_probs=203.6
Q ss_pred CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEEC
Q ss_conf 75375450224457459999079979999939995999948977533322220356417971289998329869999807
Q 000410 1128 RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1128 ~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~ 1207 (1553)
+++++++|+||.++|++++|+| |+|||.||+|++||..++. ..|...|.++.+.++ ..+++++.
T Consensus 2 ~~~~i~~l~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~-----------~~h~~~V~~~~~~~~-~~~~s~s~ 65 (287)
T d1pgua2 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH-----------QDHSNLIVSLDNSKA-QEYSSISW 65 (287)
T ss_dssp EEEEEEEECCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE-----------CCCCSCEEEEECCST-TCCEEEET
T ss_pred CCCEEEEECCCCCCEEEEEECC----EEEEECCCEEEEEECCCCC-----------CCCCCCEEEEEECCC-CEEEEEEE
T ss_conf 9603499988798649999895----7898489919999899988-----------887787899996599-72898861
Q ss_pred CCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCC
Q ss_conf 99399999331256888643345643421002699848999981279985039999958963999969989644300058
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|+++++|++.... .+..+.++.++++ + .++..+.++.+.+|+..++.....+..
T Consensus 66 D~~v~~w~~~~~~---------------------~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~- 119 (287)
T d1pgua2 66 DDTLKVNGITKHE---------------------FGSQPKVASANND---G-FTAVLTNDDDLLILQSFTGDIIKSVRL- 119 (287)
T ss_dssp TTEEEETTEEEEE---------------------CSSCEEEEEECSS---S-EEEEEETTSEEEEEETTTCCEEEEEEC-
T ss_pred CCCCCCCCCCCCC---------------------CCCCEEEEEECCC---C-CEEEEEECCCCEEEECCCEEEEEECCC-
T ss_conf 0122211111111---------------------1221014664167---8-569996033210000110035431012-
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCC-CEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCE
Q ss_conf 8876638999969998999992799-399996888964352650356883148964599997544689988999976993
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRG-VLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1288 ~h~g~Itsi~~sp~g~~LvsGs~dG-~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~ 1366 (1553)
...+. ++++++..+++|+.++ .+++|+++..........++..++..+.+ +|+ +.++++++.|+.
T Consensus 120 --~~~~~--~~~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~-s~~---------~~~l~~g~~dg~ 185 (287)
T d1pgua2 120 --NSPGS--AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISI-SPS---------ETYIAAGDVMGK 185 (287)
T ss_dssp --SSCEE--EEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEE-CTT---------SSEEEEEETTSC
T ss_pred --CCEEE--EEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEE-CCC---------CCCCCCCCCCCC
T ss_conf --22035--6521475111000221000210001221000121024785369995-167---------652110111111
Q ss_pred EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC--
Q ss_conf 999995888189998614689987667776323589988999863222445322223338999886681782338999--
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-- 1444 (1553)
Q Consensus 1367 I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-- 1444 (1553)
|.+||+.++....... ..|...|.+++|+|.+
T Consensus 186 i~i~d~~~~~~~~~~~----------------------------------------------~~h~~~v~~~~~~p~~~~ 219 (287)
T d1pgua2 186 ILLYDLQSREVKTSRW----------------------------------------------AFRTSKINAISWKPAEKG 219 (287)
T ss_dssp EEEEETTTTEEEECCS----------------------------------------------CCCSSCEEEEEECCCC--
T ss_pred CCCEEECCCCCCCCCC----------------------------------------------CCCCCCCCEEEECCCCCC
T ss_conf 0000002332110001----------------------------------------------111111100000136541
Q ss_pred ---------EEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf ---------08981699819998399999964971899889889840788605870999932058864023478888652
Q 000410 1445 ---------DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAA 1515 (1553)
Q Consensus 1445 ---------~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 1515 (1553)
.++||+.|+.|++||+.++......
T Consensus 220 ~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~---------------------------------------------- 253 (287)
T d1pgua2 220 ANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKA---------------------------------------------- 253 (287)
T ss_dssp ----CCSCCEEEEEETTSCEEEEESSCTTCCEEE----------------------------------------------
T ss_pred CCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEE----------------------------------------------
T ss_conf 0012678870276649995999888999758999----------------------------------------------
Q ss_pred HCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 01766887530458752206981999980895289829
Q 000410 1516 ATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1516 ~~~~~~~H~d~I~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
..+|.+.|+++ .|++++ .++|++.||.|++|+
T Consensus 254 ----~~~h~~~V~~v-~~~~~~-~l~s~g~D~~v~iW~ 285 (287)
T d1pgua2 254 ----LNAHKDGVNNL-LWETPS-TLVSSGADACIKRWN 285 (287)
T ss_dssp ----TTSSTTCEEEE-EEEETT-EEEEEETTSCEEEEE
T ss_pred ----ECCCCCCEEEE-EECCCC-EEEEEECCCEEEEEE
T ss_conf ----27878985899-998999-899997999299999
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.1e-28 Score=215.02 Aligned_cols=286 Identities=19% Similarity=0.305 Sum_probs=204.2
Q ss_pred EEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 75450224457459999079979999939995999948977533322220356417971289998329869999807993
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DGs 1210 (1553)
.+..+.+|...|+|+. +|+++|||||.||+|+|||+.+++ ...++.+|.+.|+++.| +++.|++|+.||.
T Consensus 7 ~i~~~~~~~~~V~c~~--~d~~~l~sgs~Dg~i~vWd~~~~~------~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~ 76 (293)
T d1p22a2 7 RIHCRSETSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLE------CKRILTGHTGSVLCLQY--DERVIITGSSDST 76 (293)
T ss_dssp CEECCCSSCCCEEEEE--CCSSEEEEEESSSCEEEEESSSCC------EEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred EEECCCCCCCCEEEEE--ECCCEEEEEECCCEEEEEECCCCC------EEEEEECCCCCEEEEEC--CCCEEECCCCCCC
T ss_conf 9843289999889998--769999999289939999999991------99999267787763423--6300210011101
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEE-CCCCC
Q ss_conf 99999331256888643345643421002699848999981279985039999958963999969989644300-05888
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL-KAIPE 1289 (1553)
Q Consensus 1211 I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l-~~~~h 1289 (1553)
|++|++.... ...... ........ +... ...++++..++.+.+||.......... ....|
T Consensus 77 i~~~~~~~~~-------------~~~~~~-~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (293)
T d1p22a2 77 VRVWDVNTGE-------------MLNTLI-HHCEAVLH--LRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH 137 (293)
T ss_dssp EEEEESSSCC-------------EEEEEC-CCCSCEEE--EECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCC
T ss_pred CCCCCCCCCC-------------CCCCCC-CCCCCCCC--CCCC---CCCEEECCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf 1000002464-------------100111-11100001--1111---100000135663068613445444212100011
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEE
Q ss_conf 76638999969998999992799399996888964352650356883148964599997544689988999976993999
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1369 (1553)
Q Consensus 1290 ~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~i 1369 (1553)
...+.++.+.+ ..+++++.||.+++||++....+..+.. +...+..+.+ .+..+++++.|+.|++
T Consensus 138 ~~~v~~~~~~~--~~~~~~s~d~~i~~~d~~~~~~~~~~~~-~~~~v~~~~~------------~~~~l~~~~~dg~i~i 202 (293)
T d1p22a2 138 RAAVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNG-HKRGIACLQY------------RDRLVVSGSSDNTIRL 202 (293)
T ss_dssp SSCEEEEEEET--TEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEE------------ETTEEEEEETTSCEEE
T ss_pred CCCCCCCEECC--CCCCCCCCCCCEEEECCCCCCEEEEECC-CCCCCCCCCC------------CCCEEEEECCCCEEEE
T ss_conf 35431100000--2201106998604100788838899715-5445322168------------9875887658998999
Q ss_pred EECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEC
Q ss_conf 99588818999861468998766777632358998899986322244532222333899988668178233899908981
Q 000410 1370 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTG 1449 (1553)
Q Consensus 1370 WDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~LlTg 1449 (1553)
||+.++.+...+..... .+.++.+ ....+++|
T Consensus 203 ~d~~~~~~~~~~~~~~~-----------------------------------------------~v~~~~~-~~~~l~sg 234 (293)
T d1p22a2 203 WDIECGACLRVLEGHEE-----------------------------------------------LVRCIRF-DNKRIVSG 234 (293)
T ss_dssp EETTTCCEEEEECCCSS-----------------------------------------------CEEEEEC-CSSEEEEE
T ss_pred EECCCCEEEEEECCCCE-----------------------------------------------EEEECCC-CCEEEEEE
T ss_conf 86655614665214310-----------------------------------------------0000145-41079998
Q ss_pred CCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 69981999839999996497189988988984078860587099993205886402347888865201766887530458
Q 000410 1450 GTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILS 1529 (1553)
Q Consensus 1450 g~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ 1529 (1553)
+.|+.|++||+..........+. .....+.+|.+.|++
T Consensus 235 ~~dg~i~iwd~~~~~~~~~~~~~------------------------------------------~~~~~~~~H~~~V~~ 272 (293)
T d1p22a2 235 AYDGKIKVWDLVAALDPRAPAGT------------------------------------------LCLRTLVEHSGRVFR 272 (293)
T ss_dssp ETTSCEEEEEHHHHTSTTSCTTT------------------------------------------TEEEEECCCSSCCCC
T ss_pred CCCCEEEEEECCCCCCCCCCCCC------------------------------------------EEEEEECCCCCCEEE
T ss_conf 67997999988888644456775------------------------------------------455784588998899
Q ss_pred EEEEECCCCEEEEECCCCEEEECC
Q ss_conf 752206981999980895289829
Q 000410 1530 LGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1530 ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+ .| ++.+|+|||.||.|+||+
T Consensus 273 v-~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 273 L-QF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp E-EE--CSSCEEECCSSSEEEEEC
T ss_pred E-EE--CCCEEEEEECCCEEEEEC
T ss_conf 9-97--199999992299899959
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=1.6e-28 Score=213.99 Aligned_cols=298 Identities=12% Similarity=0.092 Sum_probs=210.4
Q ss_pred CCEEEEEECCCCCEEEEEECCC-CEEEEECCCCCCCCCCCCCEEEECCC-CCEEEEEEEC--CCCEEEEEECCCCEEEEE
Q ss_conf 5745999907997999993999-59999489775333222203564179-7128999832--986999980799399999
Q 000410 1140 SAVNEIAISHDHSFFVSASDDS-TVKVWDSRKLEKDISFRSRLTYHLEG-SRALCTMMLR--HSAQVVVGACDGIIHMFS 1215 (1553)
Q Consensus 1140 ~~V~~i~~spd~~~laSgS~DG-tVkIWD~~~~~~~~~~~~~~t~~~h~-~~I~~i~f~~--~~~~lvs~s~DGsI~iwd 1215 (1553)
+.+++++|+|++..|+.++.+. .++.||...... .....+.+|. ..|++++|+| ++..+++|+.||+|++|+
T Consensus 18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~----~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd 93 (325)
T d1pgua1 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKV----PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 93 (325)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSS----CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCC----CCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEE
T ss_conf 98479999899799999969987999976888876----50289907899988999981179997999994899779854
Q ss_pred EEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEEC--CCEEEEEECCCCCCCCEECCCCCCCCE
Q ss_conf 331256888643345643421002699848999981279985039999958--963999969989644300058887663
Q 000410 1216 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ--NCGIHLWDTRSNSNTWTLKAIPEEGYV 1293 (1553)
Q Consensus 1216 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~--dg~I~iwDlrt~~~~~~l~~~~h~g~I 1293 (1553)
+...... ... . .........+...+..++|+++ +..+++++. ++.+.+|+..+++....+.. |.+.|
T Consensus 94 ~~~~~~~-~~~----~-~~~~~~~~~~~~~v~~v~~s~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v 162 (325)
T d1pgua1 94 WTFDKES-NSV----E-VNVKSEFQVLAGPISDISWDFE---GRRLCVVGEGRDNFGVFISWDSGNSLGEVSG--HSQRI 162 (325)
T ss_dssp EEEEGGG-TEE----E-EEEEEEEECCSSCEEEEEECTT---SSEEEEEECCSSCSEEEEETTTCCEEEECCS--CSSCE
T ss_pred ECCCCCE-EEE----E-CCCCCCCCCCCCCEEEEEECCC---CCCCCEEECCCCCEEEEEEECCCCCCEEEEE--CCCCC
T ss_conf 0588621-565----1-0025411365673779998999---8822010012440478885023311001200--12343
Q ss_pred EEEEECCCCCE-EEEEECCCCEEEEECCCCCCCCEEEC--CCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEE
Q ss_conf 89999699989-99992799399996888964352650--3568831489645999975446899889999769939999
Q 000410 1294 SSLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQY--SQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1294 tsi~~sp~g~~-LvsGs~dG~I~iWDlr~~~~i~s~~~--~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iW 1370 (1553)
++++|+|++.. +++|+.||.+++||++.......... .+...|.++++ +|+. +.++++++.|+.|.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~-~pd~--------~~~l~s~~~d~~i~iw 233 (325)
T d1pgua1 163 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEF-SPDS--------GEFVITVGSDRKISCF 233 (325)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEE-CSTT--------CCEEEEEETTCCEEEE
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEE-CCCC--------CEECCCCCCCCCEEEE
T ss_conf 211112343206888621112211112211000000001577775277630-3453--------1000011233210134
Q ss_pred ECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECC
Q ss_conf 95888189998614689987667776323589988999863222445322223338999886681782338999089816
Q 000410 1371 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGG 1450 (1553)
Q Consensus 1371 Di~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~LlTgg 1450 (1553)
|++++++...+..+... +...+.++.++++..|++++
T Consensus 234 d~~~~~~~~~l~~~~~~-------------------------------------------v~~~~~s~~~~dg~~l~s~s 270 (325)
T d1pgua1 234 DGKSGEFLKYIEDDQEP-------------------------------------------VQGGIFALSWLDSQKFATVG 270 (325)
T ss_dssp ETTTCCEEEECCBTTBC-------------------------------------------CCSCEEEEEESSSSEEEEEE
T ss_pred EECCCCCCCCCCCCCCC-------------------------------------------CCCCEEEEECCCCCEEEEEE
T ss_conf 30012221111111111-------------------------------------------11100000036899999995
Q ss_pred CCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEE
Q ss_conf 99819998399999964971899889889840788605870999932058864023478888652017668875304587
Q 000410 1451 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1530 (1553)
Q Consensus 1451 ~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~i 1530 (1553)
.|+.|++||+.+++....+... .|.-.+..+
T Consensus 271 ~D~~i~iwd~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~ 301 (325)
T d1pgua1 271 ADATIRVWDVTTSKCVQKWTLD-------------------------------------------------KQQLGNQQV 301 (325)
T ss_dssp TTSEEEEEETTTTEEEEEEECC-------------------------------------------------TTCGGGCEE
T ss_pred CCCEEEEEECCCCCEEEEEEEC-------------------------------------------------CCCCCCEEE
T ss_conf 8993999999999788999954-------------------------------------------------874067699
Q ss_pred EEEECCCCEEEEECCCCEEEECC
Q ss_conf 52206981999980895289829
Q 000410 1531 GSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1531 a~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
++...+...|+|+|.||.|+||+
T Consensus 302 ~~~~~~~~~l~s~s~dg~i~vwd 324 (325)
T d1pgua1 302 GVVATGNGRIISLSLDGTLNFYE 324 (325)
T ss_dssp EEEEEETTEEEEEETTSCEEEEE
T ss_pred EEEECCCCEEEEEECCCEEEEEE
T ss_conf 99988999999997999999997
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=1.4e-27 Score=207.19 Aligned_cols=254 Identities=19% Similarity=0.311 Sum_probs=213.8
Q ss_pred CCCC-CCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCE
Q ss_conf 8855-575375450224457459999079979999939995999948977533322220356417971289998329869
Q 000410 1123 SGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~-p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~ 1201 (1553)
..|+ ..|.++.++.+|.++|++++|+|++.++++++.++++.+|+..... ....+..|...+.++.|.++++.
T Consensus 42 ~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 115 (317)
T d1vyhc1 42 KVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE------CIRTMHGHDHNVSSVSIMPNGDH 115 (317)
T ss_dssp EEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC------EEECCCCCSSCEEEEEECSSSSE
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCEEEECCCCCCE
T ss_conf 999899997999995788867777630111101111111110111001111------11110000000000001699855
Q ss_pred EEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCC
Q ss_conf 99980799399999331256888643345643421002699848999981279985039999958963999969989644
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+++++.|+.+++|++.+.. .......+...+.+++|+++ +..+++++.|+.|++||+++++..
T Consensus 116 ~~~~~~d~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~d~~v~~~~~~~~~~~ 178 (317)
T d1vyhc1 116 IVSASRDKTIKMWEVQTGY--------------CVKTFTGHREWVRMVRPNQD---GTLIASCSNDQTVRVWVVATKECK 178 (317)
T ss_dssp EEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEECCCCE--------------EEEEECCCCCCCEEEECCCC---CCEEEEEECCCEEEEEEECCCEEE
T ss_conf 7765267523575114430--------------34687167776300001667---999999927982999751254034
Q ss_pred CEECCCCCCCCEEEEEECCCC--------------------CEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEE
Q ss_conf 300058887663899996999--------------------899999279939999688896435265035688314896
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCG--------------------NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCL 1341 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsi~~sp~g--------------------~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~ 1341 (1553)
..+.. |.+.+.+++++|++ ..+++|+.||.+++||++.+.++..+.. +..+|..+++
T Consensus 179 ~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-~~~~v~~~~~ 255 (317)
T d1vyhc1 179 AELRE--HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG-HDNWVRGVLF 255 (317)
T ss_dssp EEECC--CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEE
T ss_pred EEEEC--CCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCCEEEEEEC-CCCCEEEEEE
T ss_conf 78824--77873379986325641110345630343025886147516997899988899968899968-8998799998
Q ss_pred ECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 45999975446899889999769939999958881899986146899876677763235899889998632224453222
Q 000410 1342 FVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYR 1421 (1553)
Q Consensus 1342 ~~p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 1421 (1553)
+|. +.++++++.||.|++||+.++++..++..+.
T Consensus 256 -~~~---------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~------------------------------------ 289 (317)
T d1vyhc1 256 -HSG---------GKFILSCADDKTLRVWDYKNKRCMKTLNAHE------------------------------------ 289 (317)
T ss_dssp -CSS---------SSCEEEEETTTEEEEECCTTSCCCEEEECCS------------------------------------
T ss_pred -CCC---------CCEEEEEECCCEEEEEECCCCCEEEEECCCC------------------------------------
T ss_conf -799---------9999999798949999999991999992899------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCC-EEEECCCCCEEEEEE
Q ss_conf 23338999886681782338999-089816998199983
Q 000410 1422 VDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1422 ~~~l~~~~~~~~~V~sl~~sp~g-~LlTgg~Dg~IrlWD 1459 (1553)
..|++++|+|++ .|+||+.|+.|++||
T Consensus 290 -----------~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 290 -----------HFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp -----------SCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred -----------CCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf -----------9889999949999999992899499829
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.97 E-value=7.7e-27 Score=202.00 Aligned_cols=258 Identities=17% Similarity=0.251 Sum_probs=201.9
Q ss_pred CCCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCE
Q ss_conf 88555-75375450224457459999079979999939995999948977533322220356417971289998329869
Q 000410 1123 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~p-~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~ 1201 (1553)
..|+. .|..+..+.+|.++|++++|+|++.++++|+.|+++++|+........ +......+|.....+. .......
T Consensus 80 ~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~ 156 (340)
T d1tbga_ 80 IIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNV--RVSRELAGHTGYLSCC-RFLDDNQ 156 (340)
T ss_dssp EEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCC--CEEEEECCCSSCEEEE-EEEETTE
T ss_pred EEEECCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCC--CCCEECCCCCCCCCCC-CCCCCCC
T ss_conf 563102102579972465337756760121144310133201013322221222--1110013542110111-1111111
Q ss_pred EEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCC
Q ss_conf 99980799399999331256888643345643421002699848999981279985039999958963999969989644
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+..+..|+....+..... ............+....+.+. ...+++++.|+.|++||+++++..
T Consensus 157 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~v~i~d~~~~~~~ 219 (340)
T d1tbga_ 157 IVTSSGDTTCALWDIETG--------------QQTTTFTGHTGDVMSLSLAPD---TRLFVSGACDASAKLWDVREGMCR 219 (340)
T ss_dssp EEEEETTTEEEEEETTTT--------------EEEEEEECCSSCEEEEEECTT---SSEEEEEETTTEEEEEETTTTEEE
T ss_pred CCCCCCCCCCCCCCCCCC--------------CCCCCCCCCCEEEEEECCCCC---CCEEEEEECCCEEEEEECCCCCEE
T ss_conf 111124454320012322--------------111112331015763001244---212687605736999999999488
Q ss_pred CEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECC-CCCCCCEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 30005888766389999699989999927993999968889643526503-56883148964599997544689988999
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS-QVCPIEKMCLFVPPPNAAVSTTARPLIYV 1360 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~-~~~~I~~l~~~~p~~~~~~~s~~~~~i~s 1360 (1553)
.++.. |.+.|++++|+|++.+|++|+.||.+++||++....+..+... +..++..+.+ +|. +.++++
T Consensus 220 ~~~~~--h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~---------~~~l~~ 287 (340)
T d1tbga_ 220 QTFTG--HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF-SKS---------GRLLLA 287 (340)
T ss_dssp EEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE-CSS---------SCEEEE
T ss_pred EEEEC--CCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEE-CCC---------CCEEEE
T ss_conf 99957--889858999979989999996999699975212211111112244574589999-899---------999999
Q ss_pred EECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 97699399999588818999861468998766777632358998899986322244532222333899988668178233
Q 000410 1361 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1440 (1553)
Q Consensus 1361 ~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1440 (1553)
++.||.|++||+.++++...+..+ ...|++++|
T Consensus 288 g~~dg~i~iwd~~~~~~~~~~~~H-----------------------------------------------~~~V~~l~~ 320 (340)
T d1tbga_ 288 GYDDFNCNVWDALKADRAGVLAGH-----------------------------------------------DNRVSCLGV 320 (340)
T ss_dssp EETTSCEEEEETTTCCEEEEECCC-----------------------------------------------SSCEEEEEE
T ss_pred EECCCEEEEEECCCCCEEEEECCC-----------------------------------------------CCCEEEEEE
T ss_conf 979798999999999398998489-----------------------------------------------997899999
Q ss_pred CCCC-EEEECCCCCEEEEEE
Q ss_conf 8999-089816998199983
Q 000410 1441 LPGG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1441 sp~g-~LlTgg~Dg~IrlWD 1459 (1553)
+|++ .|+|||.||.|++||
T Consensus 321 s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 321 TDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTSSCEEEEETTSCEEEEC
T ss_pred ECCCCEEEEECCCCEEEEEC
T ss_conf 08999999990699799859
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.96 E-value=1.3e-25 Score=193.32 Aligned_cols=258 Identities=15% Similarity=0.189 Sum_probs=190.3
Q ss_pred CCCCC-CCCEEEECC-CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC
Q ss_conf 88555-753754502-2445745999907997999993999599994897753332222035641797128999832986
Q 000410 1123 SGWRP-RGILVAHLQ-EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1123 ~~W~p-~G~lv~~l~-~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~ 1200 (1553)
..|+. .|+++..+. +|.++|++++|+|++.+ ++++.|+++++|+....... ........+...+.++.|.+++.
T Consensus 37 ~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~g~ 112 (299)
T d1nr0a2 37 NSWDISTGISNRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLKVVPAGGSGVD---SSKAVANKLSSQPLGLAVSADGD 112 (299)
T ss_dssp EEEETTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEETTTEEEEECSSSSSSC---TTSCCEEECSSCEEEEEECTTSS
T ss_pred EEEECCCCCEEEEECCCCCCCEEEEEEECCCEE-ECCCCEEEEEEECCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999999996889983788774899884033112-10231026887316776201---11000111134432100112211
Q ss_pred EEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 99998079939999933125688864334564342100269984899998127998503999995896399996998964
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++++ ++.+.+|+.... ... .......+++|+++ +.++++++.++.|++||+++++.
T Consensus 113 ~~~~~~-~~~i~~~~~~~~----------------~~~--~~~~~~~~~~~s~~---~~~l~~g~~dg~i~~~d~~~~~~ 170 (299)
T d1nr0a2 113 IAVAAC-YKHIAIYSHGKL----------------TEV--PISYNSSCVALSND---KQFVAVGGQDSKVHVYKLSGASV 170 (299)
T ss_dssp CEEEEE-SSEEEEEETTEE----------------EEE--ECSSCEEEEEECTT---SCEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCCC-CCCCCCCCCCCC----------------CCC--CCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 111222-222211111111----------------110--11112332211111---11111111111111111111111
Q ss_pred CCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC--CCCCCCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf 43000588876638999969998999992799399996888964352650--3568831489645999975446899889
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY--SQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~--~~~~~I~~l~~~~p~~~~~~~s~~~~~i 1358 (1553)
..... ..|.+.|++++|+|++.++++|+.+|.+++||++.......... .|..+|.++.+ +|. +.++
T Consensus 171 ~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~-s~~---------~~~l 239 (299)
T d1nr0a2 171 SEVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSW-SPD---------NVRL 239 (299)
T ss_dssp EEEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEE-CTT---------SSEE
T ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC---------CCCE
T ss_conf 11111-111111111111111111111111111111111111111111111111111111124-666---------4513
Q ss_pred EEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 99976993999995888189998614689987667776323589988999863222445322223338999886681782
Q 000410 1359 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438 (1553)
Q Consensus 1359 ~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1438 (1553)
++++.|+.|++||++++.....+.... .+...+.++
T Consensus 240 ~sgs~dg~i~iwd~~~~~~~~~~~~~~--------------------------------------------~~~~~v~~~ 275 (299)
T d1nr0a2 240 ATGSLDNSVIVWNMNKPSDHPIIIKGA--------------------------------------------HAMSSVNSV 275 (299)
T ss_dssp EEEETTSCEEEEETTCTTSCCEEETTS--------------------------------------------STTSCEEEE
T ss_pred EEECCCCEEEEEECCCCCCCEEEEECC--------------------------------------------CCCCCEEEE
T ss_conf 888289979999899997314898348--------------------------------------------988968999
Q ss_pred CCCCCCEEEECCCCCEEEEEECC
Q ss_conf 33899908981699819998399
Q 000410 1439 LPLPGGDLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1439 ~~sp~g~LlTgg~Dg~IrlWDl~ 1461 (1553)
.+.++..|+|||.|+.||+||+.
T Consensus 276 ~~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 276 IWLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEEETTEEEEEETTSCEEEEECC
T ss_pred EECCCCEEEEEECCCEEEEEECC
T ss_conf 97798999999289979999444
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=4.5e-25 Score=189.49 Aligned_cols=284 Identities=16% Similarity=0.225 Sum_probs=207.5
Q ss_pred EEEECCCCCCCE-EEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 754502244574-5999907997999993999599994897753332222035641797128999832986999980799
Q 000410 1131 LVAHLQEHCSAV-NEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1209 (1553)
Q Consensus 1131 lv~~l~~H~~~V-~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DG 1209 (1553)
...+|.||.++| +|+++ ++++|+|||.||+|+|||..+++ ...++.+|.+.|++++|+++ +.+++|+.||
T Consensus 4 ~~~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~------~~~~l~~H~~~V~~l~~s~~-~~l~s~s~D~ 74 (355)
T d1nexb2 4 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKK------FLLQLSGHDGGVWALKYAHG-GILVSGSTDR 74 (355)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTE------EEEEEECCSSCEEEEEEETT-TEEEEEETTC
T ss_pred CCEEECCCCCCCEEEEEE--CCCEEEEEECCCEEEEEECCCCC------EEEEEECCCCCEEEEEECCC-CEEEEEECCC
T ss_conf 758889837886999998--89999999189909999899993------99999789998899998699-9999996452
Q ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECC---
Q ss_conf 39999933125688864334564342100269984899998127998503999995896399996998964430005---
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA--- 1286 (1553)
Q Consensus 1210 sI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~--- 1286 (1553)
+|++|+..... ..................+.++ +..+++++.|+.|++||+++.........
T Consensus 75 ~i~iw~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~ 139 (355)
T d1nexb2 75 TVRVWDIKKGC------------CTHVFEGHNSTVRCLDIVEYKN---IKYIVTGSRDNTLHVWKLPKESSVPDHGEEHD 139 (355)
T ss_dssp CEEEEETTTTE------------EEEEECCCSSCEEEEEEEEETT---EEEEEEEETTSEEEEEECCC-----------C
T ss_pred CCCCCCCCCCC------------CCCCCCCCCCCCCCCCCCCCCC---CCEEEEECCCCCEEEEECCCCCEECCCCCCCE
T ss_conf 44321111111------------1111100111111111111123---22045543888689998567730012465200
Q ss_pred ------------------CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCC
Q ss_conf ------------------88876638999969998999992799399996888964352650356883148964599997
Q 000410 1287 ------------------IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1348 (1553)
Q Consensus 1287 ------------------~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~ 1348 (1553)
..|...+. ++.++++.+++|..|+.+++||++.+..+..... +...+..+.+ .+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~-~~~--- 212 (355)
T d1nexb2 140 YPLVFHTPEENPYFVGVLRGHMASVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSG-HTDRIYSTIY-DHE--- 212 (355)
T ss_dssp CCEEESCTTTCTTEEEEEECCSSCEE--EEEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEE-ETT---
T ss_pred ECCCEECCCCCCCEEEEEEECCCCCC--CCCCCCCEEEEECCCCEEEEEECCCCCCEEEEEC-CCCCCCCCCC-CCC---
T ss_conf 01000001123401210110022210--0002563344211442044430131100011000-1233211111-121---
Q ss_pred CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 54468998899997699399999588818999861468998766777632358998899986322244532222333899
Q 000410 1349 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEP 1428 (1553)
Q Consensus 1349 ~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 1428 (1553)
+..+++++.|+.|++||++++.+...+..+.
T Consensus 213 ------~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~------------------------------------------- 243 (355)
T d1nexb2 213 ------RKRCISASMDTTIRIWDLENGELMYTLQGHT------------------------------------------- 243 (355)
T ss_dssp ------TTEEEEEETTSCEEEEETTTCCEEEEECCCS-------------------------------------------
T ss_pred ------CEEEECCCCCCEEEEEECCCCCCCCCCCCCC-------------------------------------------
T ss_conf ------0021012456368763012211111111111-------------------------------------------
Q ss_pred CCCCCCCEEECCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHH
Q ss_conf 98866817823389990898169981999839999996497189988988984078860587099993205886402347
Q 000410 1429 PPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTA 1508 (1553)
Q Consensus 1429 ~~~~~~V~sl~~sp~g~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 1508 (1553)
..|.++.+++ ..+++|+.|+.|++||+.+.... +.
T Consensus 244 ----~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~--~~-------------------------------------- 278 (355)
T d1nexb2 244 ----ALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRK--FS-------------------------------------- 278 (355)
T ss_dssp ----SCCCEEEECS-SEEEEECTTSEEEEEETTTCCEE--EE--------------------------------------
T ss_pred ----CCCCCCCCCC-CEEEEEECCCCCCCCCCCCCCEE--CC--------------------------------------
T ss_conf ----1111112321-00333201111111111111100--01--------------------------------------
Q ss_pred HHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 888865201766887530458752206981999980895289829
Q 000410 1509 KAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1509 ~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|...+.+++.+.+++.++++|+ ||.|+||+
T Consensus 279 -------------~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd 309 (355)
T d1nexb2 279 -------------YHHTNLSAITTFYVSDNILVSGS-ENQFNIYN 309 (355)
T ss_dssp -------------EECTTCCCCCEEEECSSEEEEEE-TTEEEEEE
T ss_pred -------------CCCCCCEEEEEECCCCCEEEEEE-CCEEEEEE
T ss_conf -------------24688229999849998999980-99799999
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=5.3e-24 Score=181.89 Aligned_cols=255 Identities=18% Similarity=0.234 Sum_probs=176.8
Q ss_pred CCCC-CCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEE--------
Q ss_conf 8855-5753754502244574599990799799999399959999489775333222203564179712899--------
Q 000410 1123 SGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCT-------- 1193 (1553)
Q Consensus 1123 ~~W~-p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i-------- 1193 (1553)
..|+ ..|++++++.+|.++|++++|+|+ +++||+.||++++|+........ ....+...+...
T Consensus 40 ~vWd~~~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 111 (342)
T d2ovrb2 40 KVWSAVTGKCLRTLVGHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECIH------TLYGHTSTVRCMHLHEKRVV 111 (342)
T ss_dssp EEEETTTCCEEEECCCCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEEE------EECCCSSCEEEEEEETTEEE
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEECCC--CCCCCEECCCCCCCCCCCCCCEE------CCCCCCEEEEEEECCCCCCC
T ss_conf 99989999799999488999899994798--63210000011111111000000------01233304765202465221
Q ss_pred ------------------------------EEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCC
Q ss_conf ------------------------------98329869999807993999993312568886433456434210026998
Q 000410 1194 ------------------------------MMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEG 1243 (1553)
Q Consensus 1194 ------------------------------~f~~~~~~lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1243 (1553)
.+......+++++.||.|++|+.... ........+.
T Consensus 112 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~--------------~~~~~~~~~~ 177 (342)
T d2ovrb2 112 SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETE--------------TCLHTLQGHT 177 (342)
T ss_dssp EEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGT--------------EEEEEECCCS
T ss_pred CCCCCEEEEEEECCCCCCEEEEECCCCCCEEECCCCCEEEEECCCCEEEEEECCCC--------------EEEEEECCCC
T ss_conf 23444037874035563001110011110000013330243358986999525234--------------3667872754
Q ss_pred CEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCC
Q ss_conf 48999981279985039999958963999969989644300058887663899996999899999279939999688896
Q 000410 1244 AIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV 1323 (1553)
Q Consensus 1244 ~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~ 1323 (1553)
..+....+ + +..+++++.||.|++||++.++....+.. |...+.++.+++ +++++|+.||.+++||++...
T Consensus 178 ~~~~~~~~--~---~~~l~s~~~dg~i~~~d~~~~~~~~~~~~--~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~ 248 (342)
T d2ovrb2 178 NRVYSLQF--D---GIHVVSGSLDTSIRVWDVETGNCIHTLTG--HQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQ 248 (342)
T ss_dssp SCEEEEEE--C---SSEEEEEETTSCEEEEETTTCCEEEEECC--CCSCEEEEEEET--TEEEEEETTSCEEEEETTTCC
T ss_pred CCCCCCCC--C---CCEEEEEECCCEEEEEECCCCEEEEEECC--CCCCEEEEECCC--CEEEEECCCCEEEEEECCCCC
T ss_conf 44210068--9---99999995899399952556536567416--653205770689--999997489889998655442
Q ss_pred CCCEEECCC--CCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 435265035--688314896459999754468998899997699399999588818999861468998766777632358
Q 000410 1324 PVNSWQYSQ--VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFAR 1401 (1553)
Q Consensus 1324 ~i~s~~~~~--~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~ 1401 (1553)
....+.... ...+..+.+ ++.++++++.||.|++||++++++.+.+.....
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~--------------- 301 (342)
T d2ovrb2 249 CLQTLQGPNKHQSAVTCLQF------------NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES--------------- 301 (342)
T ss_dssp EEEEECSTTSCSSCEEEEEE------------CSSEEEEEETTSEEEEEETTTCCEEEEEEECTT---------------
T ss_pred CCCCCCCCCEEEECEEECCC------------CCCEEEEECCCCEEEEEECCCCCEEEEEECCCC---------------
T ss_conf 21112210001101000013------------798449990899899999999979899862347---------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCE-EEECCCCC----EEEEEECCC
Q ss_conf 99889998632224453222233389998866817823389990-89816998----199983999
Q 000410 1402 PSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGD-LLTGGTDL----KIRRWDHCS 1462 (1553)
Q Consensus 1402 p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~-LlTgg~Dg----~IrlWDl~~ 1462 (1553)
.+|...|++++|+|++. +++|+.|| +|++||+..
T Consensus 302 ---------------------------~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 302 ---------------------------GGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp ---------------------------GGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ---------------------------CCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCC
T ss_conf ---------------------------898897899998799989999968999704899993899
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=1.8e-22 Score=171.00 Aligned_cols=255 Identities=17% Similarity=0.179 Sum_probs=181.4
Q ss_pred CCCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCE
Q ss_conf 88555-75375450224457459999079979999939995999948977533322220356417971289998329869
Q 000410 1123 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~p-~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~ 1201 (1553)
..|+. .|+++.++.+|.++|++++| ++++|+||+.||++++|+...+.. ......+. .....+......
T Consensus 38 ~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~~~ 107 (293)
T d1p22a2 38 KIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM------LNTLIHHC--EAVLHLRFNNGM 107 (293)
T ss_dssp EEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE------EEEECCCC--SCEEEEECCTTE
T ss_pred EEEECCCCCEEEEEECCCCCEEEEEC--CCCEEECCCCCCCCCCCCCCCCCC------CCCCCCCC--CCCCCCCCCCCC
T ss_conf 99999999199999267787763423--630021001110110000024641------00111111--000011111100
Q ss_pred EEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCC
Q ss_conf 99980799399999331256888643345643421002699848999981279985039999958963999969989644
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
++++..++.+.+|+...... .........+...+....+... .+++++.|+.|++||+++++..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~-----~~~~~s~d~~i~~~d~~~~~~~ 171 (293)
T d1p22a2 108 MVTCSKDRSIAVWDMASPTD-----------ITLRRVLVGHRAAVNVVDFDDK-----YIVSASGDRTIKVWNTSTCEFV 171 (293)
T ss_dssp EEEEETTSCEEEEECSSSSC-----------CEEEEEECCCSSCEEEEEEETT-----EEEEEETTSEEEEEETTTCCEE
T ss_pred EEECCCCCCEEEEECCCCCC-----------CCCCCCCCCCCCCCCCCEECCC-----CCCCCCCCCCEEEECCCCCCEE
T ss_conf 00013566306861344544-----------4212100011354311000002-----2011069986041007888388
Q ss_pred CEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf 30005888766389999699989999927993999968889643526503568831489645999975446899889999
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~ 1361 (1553)
..+.. +...+..+.++ +.++++|+.||.+++||++....+..+.. +...+... .+ ++.+++++
T Consensus 172 ~~~~~--~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~---~~---------~~~~l~sg 234 (293)
T d1p22a2 172 RTLNG--HKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCI---RF---------DNKRIVSG 234 (293)
T ss_dssp EEEEC--CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEE---EC---------CSSEEEEE
T ss_pred EEECC--CCCCCCCCCCC--CCEEEEECCCCEEEEEECCCCEEEEEECC-CCEEEEEC---CC---------CCEEEEEE
T ss_conf 99715--54453221689--87588765899899986655614665214-31000001---45---------41079998
Q ss_pred ECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 76993999995888189998614689987667776323589988999863222445322223338999886681782338
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.|+.|++||+..+....... . ...+....+|...|++++|+
T Consensus 235 ~~dg~i~iwd~~~~~~~~~~~-----------------------------------~---~~~~~~~~~H~~~V~~v~~d 276 (293)
T d1p22a2 235 AYDGKIKVWDLVAALDPRAPA-----------------------------------G---TLCLRTLVEHSGRVFRLQFD 276 (293)
T ss_dssp ETTSCEEEEEHHHHTSTTSCT-----------------------------------T---TTEEEEECCCSSCCCCEEEC
T ss_pred CCCCEEEEEECCCCCCCCCCC-----------------------------------C---CEEEEEECCCCCCEEEEEEC
T ss_conf 679979999888886444567-----------------------------------7---54557845889988999971
Q ss_pred CCCEEEECCCCCEEEEEE
Q ss_conf 999089816998199983
Q 000410 1442 PGGDLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1442 p~g~LlTgg~Dg~IrlWD 1459 (1553)
+ ..|+|||.|++|++||
T Consensus 277 ~-~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 277 E-FQIVSSSHDDTILIWD 293 (293)
T ss_dssp S-SCEEECCSSSEEEEEC
T ss_pred C-CEEEEEECCCEEEEEC
T ss_conf 9-9999992299899959
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=6.5e-23 Score=174.12 Aligned_cols=222 Identities=9% Similarity=0.109 Sum_probs=156.3
Q ss_pred CCEEEEEECCCCEEEEECCCCCCCCCCCC----CEEEECCCCCEEEEEEECC-----CCEEEEEECCCCEEEEEEEECCC
Q ss_conf 97999993999599994897753332222----0356417971289998329-----86999980799399999331256
Q 000410 1151 HSFFVSASDDSTVKVWDSRKLEKDISFRS----RLTYHLEGSRALCTMMLRH-----SAQVVVGACDGIIHMFSVDHISR 1221 (1553)
Q Consensus 1151 ~~~laSgS~DGtVkIWD~~~~~~~~~~~~----~~t~~~h~~~I~~i~f~~~-----~~~lvs~s~DGsI~iwdi~~~~~ 1221 (1553)
..++++++.||+|++|+............ ......+...+..++|.++ ++.+++++.||++++|++.....
T Consensus 79 ~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~ 158 (393)
T d1sq9a_ 79 LCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 158 (393)
T ss_dssp EEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred CCEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCC
T ss_conf 76899994899199998228982056512456324311578966899984478865421799983898199987404775
Q ss_pred CCCCC----CCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECC----CCCCCCE
Q ss_conf 88864----334564342100269984899998127998503999995896399996998964430005----8887663
Q 000410 1222 GLGNV----EKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA----IPEEGYV 1293 (1553)
Q Consensus 1222 ~~~~~----~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~----~~h~g~I 1293 (1553)
..... ...............+...+.+++|+++ + ++++|+.|+.|++||+++++....++. ..|...|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d---g-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V 234 (393)
T d1sq9a_ 159 ESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER---G-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234 (393)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT---S-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE
T ss_pred CCCEEEEEECCCEECCCCEECCCCCCCCEEEEEECCC---C-EEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEE
T ss_conf 3410233103200014510002578986789997899---9-89999389829998602332110000111112425638
Q ss_pred EEEEECCCCCEEEEEECCCC---EEEEECCCCCCCCEEEC------------CCCCCCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf 89999699989999927993---99996888964352650------------3568831489645999975446899889
Q 000410 1294 SSLVTGPCGNWFVSGSSRGV---LTLWDLRFLVPVNSWQY------------SQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1294 tsi~~sp~g~~LvsGs~dG~---I~iWDlr~~~~i~s~~~------------~~~~~I~~l~~~~p~~~~~~~s~~~~~i 1358 (1553)
++++|+|++++|++|+.|+. +++||++++..+..+.. .|...|.+++| +| +++++
T Consensus 235 ~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~f-sp---------d~~~l 304 (393)
T d1sq9a_ 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF-ND---------SGETL 304 (393)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEE-CS---------SSSEE
T ss_pred EECCCCCCCCEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECC-CC---------CCCEE
T ss_conf 770046653201124289884210010353213444311566664310232023586660013-89---------88806
Q ss_pred EEEECCCEEEEEECCCCCEEEEEECCCC
Q ss_conf 9997699399999588818999861468
Q 000410 1359 YVAAGCNEVSLWNAENGSCHQVLRTANY 1386 (1553)
Q Consensus 1359 ~s~s~dg~I~iWDi~tg~~~~~l~~~~~ 1386 (1553)
++++.|+.|++||+++++|..++..+..
T Consensus 305 ~S~s~D~~v~vWd~~~g~~~~~l~gH~~ 332 (393)
T d1sq9a_ 305 CSAGWDGKLRFWDVKTKERITTLNMHCD 332 (393)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCGG
T ss_pred EEECCCCEEEEEECCCCCEEEEECCCCC
T ss_conf 9877999899999999979999988687
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.93 E-value=2.9e-23 Score=176.61 Aligned_cols=304 Identities=9% Similarity=-0.001 Sum_probs=172.0
Q ss_pred EEEECC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCC--CEEEEEEEECC
Q ss_conf 999907-997999993999599994897753332222035641797128999832986999980799--39999933125
Q 000410 1144 EIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG--IIHMFSVDHIS 1220 (1553)
Q Consensus 1144 ~i~~sp-d~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DG--sI~iwdi~~~~ 1220 (1553)
.-.||| ||+++|+++. |.|.+||...+. ... ..|...|.++.|+|+++.+++++.+. .|++|+.+..
T Consensus 7 ~~~fSP~dG~~~a~~~~-g~v~v~d~~~~~------~~~--~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~- 76 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVSR-GQAFIQDVSGTY------VLK--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTG- 76 (360)
T ss_dssp EEEEEECGGGCEEEEET-TEEEEECTTSSB------EEE--CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTC-
T ss_pred CCCCCCCCCCEEEEEEC-CEEEEEECCCCC------EEE--CCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCC-
T ss_conf 05146889999999989-969999899994------899--16999888899989999999999289989999989999-
Q ss_pred CCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCEEEEEECC
Q ss_conf 68886433456434210026998489999812799850399999589639999699896443000588876638999969
Q 000410 1221 RGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGP 1300 (1553)
Q Consensus 1221 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp 1300 (1553)
..+. ...+...+..++|+|+ ++++++++.++.+++||+.+++....+.. +...+.+++|+|
T Consensus 77 -------------~~~~-~~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~sp 137 (360)
T d1k32a3 77 -------------KAEK-FEENLGNVFAMGVDRN---GKFAVVANDRFEIMTVDLETGKPTVIERS--REAMITDFTISD 137 (360)
T ss_dssp -------------CEEE-CCCCCCSEEEEEECTT---SSEEEEEETTSEEEEEETTTCCEEEEEEC--SSSCCCCEEECT
T ss_pred -------------CEEE-EECCCCEEEEEEECCC---CCCCCEECCCCCCCCCCCCCCCEEEEEEC--CCCCCCCHHHCC
T ss_conf -------------4887-5089712774121145---43210001111100000122210000001--355202301213
Q ss_pred CCCEEEEEE----------CCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEE
Q ss_conf 998999992----------7993999968889643526503568831489645999975446899889999769939999
Q 000410 1301 CGNWFVSGS----------SRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1301 ~g~~LvsGs----------~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iW 1370 (1553)
+|++|+.+. .++.+.+||+..+....... +...+....+ +| ++..+++++.++.+.+|
T Consensus 138 dg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~--~~~~~~~~~~-sp---------dg~~l~~~s~~~~~~~~ 205 (360)
T d1k32a3 138 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT--ENSHDYAPAF-DA---------DSKNLYYLSYRSLDPSP 205 (360)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC--SSSBEEEEEE-CT---------TSCEEEEEESCCCCCEE
T ss_pred CEEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEECC--CCCCCCCCCC-CC---------CCCEEEEEECCCCEECC
T ss_conf 225665212331211000256542663045571353035--4322110012-57---------79999999599855753
Q ss_pred ECCCCCEE-------EEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCC
Q ss_conf 95888189-------99861468998766777632358-9988999863222445322223338999-------886681
Q 000410 1371 NAENGSCH-------QVLRTANYDGDTEMSDLPWAFAR-PSSRSNPKTDLRRNVNQKYRVDELNEPP-------PRLLGI 1435 (1553)
Q Consensus 1371 Di~tg~~~-------~~l~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~V 1435 (1553)
|....... ..+..+.. ....+.+.+.- ...... .........+....... .+...+
T Consensus 206 d~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (360)
T d1k32a3 206 DRVVLNFSFEVVSKPFVIPLIPG----SPNPTKLVPRSMTSEAGE-----YDLNDMYKRSSPINVDPGDYRMIIPLESSI 276 (360)
T ss_dssp CSSSSCEECCSCBEEEEEESSTT----CCCGGGCCCGGGSCCCCC-----CCCTTGGGGCEECSCCCBCEEEEEECSSEE
T ss_pred CCCCCCEEECCCCCEEEEECCCC----CCCCCEECCCCCCCCCCC-----EEECCCCCCEEECCCCCCCEEEEEECCCCC
T ss_conf 33544023203641179852469----601206877767155311-----365266540010124767526754138985
Q ss_pred EEECCCCCC----EEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHH
Q ss_conf 782338999----0898169981999839999996497189988988984078860587099993205886402347888
Q 000410 1436 RSLLPLPGG----DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAV 1511 (1553)
Q Consensus 1436 ~sl~~sp~g----~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 1511 (1553)
..+.+...+ .+++++.|+.|++||+.+.+..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--------------------------------------------- 311 (360)
T d1k32a3 277 LIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT--------------------------------------------- 311 (360)
T ss_dssp EEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE---------------------------------------------
T ss_pred EEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEE---------------------------------------------
T ss_conf 69999735997069996489987999979997498---------------------------------------------
Q ss_pred HHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCEEEECC
Q ss_conf 865201766887530458752206981999980895289829
Q 000410 1512 LAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1512 ~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|.+.|.++ .|+++|+.|++++.||.|++|+
T Consensus 312 ----------~~~~~v~~~-~~SpDG~~l~~~~~Dg~i~v~d 342 (360)
T d1k32a3 312 ----------EVKNNLTDL-RLSADRKTVMVRKDDGKIYTFP 342 (360)
T ss_dssp ----------EEEEEEEEE-EECTTSCEEEEEETTSCEEEEE
T ss_pred ----------EECCCCCEE-EECCCCCEEEEEECCCEEEEEE
T ss_conf ----------864886879-9999898999997899499999
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=3.5e-23 Score=176.00 Aligned_cols=250 Identities=17% Similarity=0.194 Sum_probs=179.6
Q ss_pred CCCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE
Q ss_conf 88555753754502244574599990799799999399959999489775333222203564179712899983298699
Q 000410 1123 SGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1123 ~~W~p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~l 1202 (1553)
..|+... ...+|.+.|.+++++++ ..++|++.|+++++|+....+ ....+.++.+.+++..+
T Consensus 34 ~~Wd~~~----~~~~h~~~V~~~~~~~~-~~~~s~s~D~~v~~w~~~~~~-------------~~~~~~~~~~~~~~~~~ 95 (287)
T d1pgua2 34 MEWSSSS----MHQDHSNLIVSLDNSKA-QEYSSISWDDTLKVNGITKHE-------------FGSQPKVASANNDGFTA 95 (287)
T ss_dssp EETTTTE----EECCCCSCEEEEECCST-TCCEEEETTTEEEETTEEEEE-------------CSSCEEEEEECSSSEEE
T ss_pred EEEECCC----CCCCCCCCEEEEEECCC-CEEEEEEECCCCCCCCCCCCC-------------CCCCEEEEEECCCCCEE
T ss_conf 9998999----88887787899996599-728988610122211111111-------------12210146641678569
Q ss_pred EEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECC-CEEEEEECCCCCCC
Q ss_conf 99807993999993312568886433456434210026998489999812799850399999589-63999969989644
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN-CGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1203 vs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~d-g~I~iwDlrt~~~~ 1281 (1553)
++++ ++.+.+|+..... ...... ...... +++++ +..+++++.+ +.+++|++......
T Consensus 96 ~~~~-~~~~~~~~~~~~~-------------~~~~~~--~~~~~~--~~~~~---~~~~~v~~~~~~~v~~~~~~~~~~~ 154 (287)
T d1pgua2 96 VLTN-DDDLLILQSFTGD-------------IIKSVR--LNSPGS--AVSLS---QNYVAVGLEEGNTIQVFKLSDLEVS 154 (287)
T ss_dssp EEET-TSEEEEEETTTCC-------------EEEEEE--CSSCEE--EEEEC---SSEEEEEETTTSCEEEEETTEEEEE
T ss_pred EEEE-CCCCEEEECCCEE-------------EEEECC--CCCEEE--EEECC---CCCEEEECCCCCEEEEEECCCCCEE
T ss_conf 9960-3321000011003-------------543101--222035--65214---7511100022100021000122100
Q ss_pred CEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCC-CCCCCCCCEEEE
Q ss_conf 3000588876638999969998999992799399996888964352650356883148964599997-544689988999
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA-AVSTTARPLIYV 1360 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~-~~~s~~~~~i~s 1360 (1553)
..+.. .+.+.+++++|+|++.+|++|+.+|.+++||++.+.........|..+|.++.| +|.... .....++.++++
T Consensus 155 ~~~~~-~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~-~p~~~~~~~~~~~~~~l~s 232 (287)
T d1pgua2 155 FDLKT-PLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISW-KPAEKGANEEEIEEDLVAT 232 (287)
T ss_dssp EECSS-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEE-CCCC------CCSCCEEEE
T ss_pred EEEEE-CCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEE-CCCCCCCCCCCCCCCEEEE
T ss_conf 01210-247853699951676521101111110000002332110001111111100000-1365410012678870276
Q ss_pred EECCCEEEEEECCCCC-EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 9769939999958881-899986146899876677763235899889998632224453222233389998866817823
Q 000410 1361 AAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1361 ~s~dg~I~iWDi~tg~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
|+.|+.|++||++++. +...+ .+|...|+++.
T Consensus 233 gs~D~~i~iw~~~~~~~~~~~~-----------------------------------------------~~h~~~V~~v~ 265 (287)
T d1pgua2 233 GSLDTNIFIYSVKRPMKIIKAL-----------------------------------------------NAHKDGVNNLL 265 (287)
T ss_dssp EETTSCEEEEESSCTTCCEEET-----------------------------------------------TSSTTCEEEEE
T ss_pred ECCCCEEEEEECCCCCEEEEEE-----------------------------------------------CCCCCCEEEEE
T ss_conf 6499959998889997589992-----------------------------------------------78789858999
Q ss_pred CCCCCEEEECCCCCEEEEEEC
Q ss_conf 389990898169981999839
Q 000410 1440 PLPGGDLLTGGTDLKIRRWDH 1460 (1553)
Q Consensus 1440 ~sp~g~LlTgg~Dg~IrlWDl 1460 (1553)
|++++.++|+|.|+.|++||+
T Consensus 266 ~~~~~~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 266 WETPSTLVSSGADACIKRWNV 286 (287)
T ss_dssp EEETTEEEEEETTSCEEEEEE
T ss_pred ECCCCEEEEEECCCEEEEEEE
T ss_conf 989998999979992999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=2.1e-22 Score=170.50 Aligned_cols=263 Identities=9% Similarity=0.047 Sum_probs=168.3
Q ss_pred CCCCCC-CC---EEEECCCCCCCEEEEEECCCC-CEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEC-CCCCEEEEEEE
Q ss_conf 885557-53---754502244574599990799-7999993999599994897753332222035641-79712899983
Q 000410 1123 SGWRPR-GI---LVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMML 1196 (1553)
Q Consensus 1123 ~~W~p~-G~---lv~~l~~H~~~V~~i~~spd~-~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~-h~~~I~~i~f~ 1196 (1553)
..|+.. +. .+....+|.++|++++|+|++ .+++||+.||+|++|+....... ..... +........+.
T Consensus 36 ~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~------~~~~~~~~~~~~~~~~~ 109 (342)
T d1yfqa_ 36 TVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF------QALTNNEANLGICRICK 109 (342)
T ss_dssp EEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE------EECBSCCCCSCEEEEEE
T ss_pred EEEECCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCC------CCCCCCCCCCCCCCCCC
T ss_conf 999756998636898855899988999995899978998126531145420443200------00011111111111111
Q ss_pred CCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCC-CCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEEC
Q ss_conf 29869999807993999993312568886433456434210026-99848999981279985039999958963999969
Q 000410 1197 RHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDT-KEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDT 1275 (1553)
Q Consensus 1197 ~~~~~lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDl 1275 (1553)
++...+++++.|+++++|+++....... ....... ..........+.+. +..+++++.|+.|++||+
T Consensus 110 ~~~~~~~~~~~~~~~~~wd~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~~~~~ 177 (342)
T d1yfqa_ 110 YGDDKLIAASWDGLIEVIDPRNYGDGVI---------AVKNLNSNNTKVKNKIFTMDTN---SSRLIVGMNNSQVQWFRL 177 (342)
T ss_dssp ETTTEEEEEETTSEEEEECHHHHTTBCE---------EEEESCSSSSSSCCCEEEEEEC---SSEEEEEESTTEEEEEES
T ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCEE---------EECCCCCCCCCCEEEEEEEECC---CCCEEEECCCCCEEEEEC
T ss_conf 1111111101222111020234443302---------3000243001200000100016---870246517984788760
Q ss_pred CCCCCCCEEC-CCCCCCCEEEEEECC-CCCEEEEEECCCCEEEEECCCCCCCCEEE--------------CCCCCCCCEE
Q ss_conf 9896443000-588876638999969-99899999279939999688896435265--------------0356883148
Q 000410 1276 RSNSNTWTLK-AIPEEGYVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQ--------------YSQVCPIEKM 1339 (1553)
Q Consensus 1276 rt~~~~~~l~-~~~h~g~Itsi~~sp-~g~~LvsGs~dG~I~iWDlr~~~~i~s~~--------------~~~~~~I~~l 1339 (1553)
+......... .......+.+..+.+ ++..+++++.+|.+.+|+........... ..+...++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 257 (342)
T d1yfqa_ 178 PLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSI 257 (342)
T ss_dssp SCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEE
T ss_pred CCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEE
T ss_conf 56763411121025422101467636999878865489959999805986401112351256555314777623543159
Q ss_pred EEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 96459999754468998899997699399999588818999861468998766777632358998899986322244532
Q 000410 1340 CLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQK 1419 (1553)
Q Consensus 1340 ~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1419 (1553)
++ +| ++.++++|+.||.|++||+.++++...+....
T Consensus 258 ~~-sp---------~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~---------------------------------- 293 (342)
T d1yfqa_ 258 EF-SP---------RHKFLYTAGSDGIISCWNLQTRKKIKNFAKFN---------------------------------- 293 (342)
T ss_dssp EE-CT---------TTCCEEEEETTSCEEEEETTTTEEEEECCCCS----------------------------------
T ss_pred EE-CC---------CCCEEEEECCCCEEEEEECCCCCEEEEECCCC----------------------------------
T ss_conf 96-69---------84479998799989999999894988705899----------------------------------
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCC-EEEECCCCCEEEEEECC
Q ss_conf 2223338999886681782338999-08981699819998399
Q 000410 1420 YRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1420 ~~~~~l~~~~~~~~~V~sl~~sp~g-~LlTgg~Dg~IrlWDl~ 1461 (1553)
.+..++++|++ .++++++|..++.|...
T Consensus 294 --------------~~~~~~~s~~~~~l~~a~sdd~~~~~~~~ 322 (342)
T d1yfqa_ 294 --------------EDSVVKIACSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp --------------SSEEEEEEECSSEEEEEEECTHHHHCSSS
T ss_pred --------------CCEEEEEEECCCEEEEEECCCCEEEEEEE
T ss_conf --------------98799999479999999919927883012
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=1.1e-21 Score=165.42 Aligned_cols=305 Identities=11% Similarity=-0.022 Sum_probs=176.8
Q ss_pred CCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCC--CEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCE
Q ss_conf 85557537545022445745999907997999993999--5999948977533322220356417971289998329869
Q 000410 1124 GWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDS--TVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1124 ~W~p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DG--tVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~ 1201 (1553)
.|+..+..+..+ +|.+.|++++|+||++++++++.|+ .|++||..+++ ......|...+.+++|+|+++.
T Consensus 28 v~d~~~~~~~~~-~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~-------~~~~~~~~~~v~~~~~spdg~~ 99 (360)
T d1k32a3 28 IQDVSGTYVLKV-PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK-------AEKFEENLGNVFAMGVDRNGKF 99 (360)
T ss_dssp EECTTSSBEEEC-SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC-------EEECCCCCCSEEEEEECTTSSE
T ss_pred EEECCCCCEEEC-CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCC-------EEEEECCCCEEEEEEECCCCCC
T ss_conf 998999948991-69998888999899999999992899899999899994-------8875089712774121145432
Q ss_pred EEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEE----------CCCEEE
Q ss_conf 9998079939999933125688864334564342100269984899998127998503999995----------896399
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYST----------QNCGIH 1271 (1553)
Q Consensus 1202 lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s----------~dg~I~ 1271 (1553)
+++++.++.+++|++.... .......+...+..++|+|+ +++++++. .++.++
T Consensus 100 l~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~spd---g~~la~~~~~~~~~~~~~~~~~~~ 162 (360)
T d1k32a3 100 AVVANDRFEIMTVDLETGK--------------PTVIERSREAMITDFTISDN---SRFIAYGFPLKHGETDGYVMQAIH 162 (360)
T ss_dssp EEEEETTSEEEEEETTTCC--------------EEEEEECSSSCCCCEEECTT---SCEEEEEEEECSSTTCSCCEEEEE
T ss_pred CCEECCCCCCCCCCCCCCC--------------EEEEEECCCCCCCCHHHCCC---EEEEEEECCCCCCCEEECCCCCEE
T ss_conf 1000111110000012221--------------00000013552023012132---256652123312110002565426
Q ss_pred EEECCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCC-CCCCC
Q ss_conf 99699896443000588876638999969998999992799399996888964352650356883148964599-99754
Q 000410 1272 LWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPP-PNAAV 1350 (1553)
Q Consensus 1272 iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~-~~~~~ 1350 (1553)
+||+.+++...... +.+.+.+++|+|+|++|++++.++.+.+||........ .....+..+.+ ++. .....
T Consensus 163 v~d~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~ 234 (360)
T d1k32a3 163 VYDMEGRKIFAATT---ENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF----EVVSKPFVIPL-IPGSPNPTK 234 (360)
T ss_dssp EEETTTTEEEECSC---SSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEEC----CSCBEEEEEES-STTCCCGGG
T ss_pred EECCCCCCEEEECC---CCCCCCCCCCCCCCCEEEEEECCCCEECCCCCCCCEEE----CCCCCEEEEEC-CCCCCCCCE
T ss_conf 63045571353035---43221100125779999999599855753335440232----03641179852-469601206
Q ss_pred CCCCCCEEEEEECC-----CEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 46899889999769-----9399999588818999861468998766777632358998899986322244532222333
Q 000410 1351 STTARPLIYVAAGC-----NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDEL 1425 (1553)
Q Consensus 1351 ~s~~~~~i~s~s~d-----g~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 1425 (1553)
++.++..+.++..+ ..+..++...+........ ..+. .......... .. ...........+.++++
T Consensus 235 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~---~~----~~~~~~~~~~~i~~~d~ 305 (360)
T d1k32a3 235 LVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPL-ESSI-LIYSVPVHGE---FA----AYYQGAPEKGVLLKYDV 305 (360)
T ss_dssp CCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEEC-SSEE-EEEECCCCCS---HH----HHHHCCCCCEEEEEEET
T ss_pred ECCCCCCCCCCCEEECCCCCCEEECCCCCCCEEEEEEC-CCCC-EEEEEEECCC---CE----EEEEECCCCCEEEEEEC
T ss_conf 87776715531136526654001012476752675413-8985-6999973599---70----69996489987999979
Q ss_pred CCC--CCCCCCCEEECCCCCC-EEEECCCCCEEEEEECCCCCCCEEEE
Q ss_conf 899--9886681782338999-08981699819998399999964971
Q 000410 1426 NEP--PPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCIC 1470 (1553)
Q Consensus 1426 ~~~--~~~~~~V~sl~~sp~g-~LlTgg~Dg~IrlWDl~~~~~s~~i~ 1470 (1553)
... ..+...|.+++|+||| +|++++.||.|++||+..++....+.
T Consensus 306 ~~~~~~~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~ 353 (360)
T d1k32a3 306 KTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353 (360)
T ss_dssp TTCCEEEEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECC
T ss_pred CCCEEEEECCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEE
T ss_conf 997498864886879999989899999789949999999998545998
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.90 E-value=1.7e-20 Score=157.04 Aligned_cols=325 Identities=9% Similarity=0.019 Sum_probs=193.3
Q ss_pred CCCCCC-CCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCE
Q ss_conf 885557-5375450224457459999079979999939995999948977533322220356417971289998329869
Q 000410 1123 SGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~p~-G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~ 1201 (1553)
..|+.. |+++.++..|. ++..++|||||+++++++.||+|++||+.+++...... ......|.+.+.++.|+|+|+.
T Consensus 45 ~vwD~~t~~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~-i~~~~~~~~~~~s~~~spDG~~ 122 (426)
T d1hzua2 45 ALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE-IKIGIEARSVESSKFKGYEDRY 122 (426)
T ss_dssp EEEETTTCSEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE-EECCSEEEEEEECCSTTCTTTE
T ss_pred EEEECCCCCEEEEEECCC-CEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE-EECCCCCCCEEEEEEECCCCCE
T ss_conf 999999995999996899-80389998999999999589988999756886048999-8678887645885002688987
Q ss_pred EEE-EECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 999-8079939999933125688864334564342100269984899998127998503999995896399996998964
Q 000410 1202 VVV-GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1202 lvs-~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~ 1280 (1553)
+++ +..++++.+|+....... ....... ................+..++++ ...+......+.+..++......
T Consensus 123 l~v~~~~~~~v~i~d~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~i~~s~d~--~~~~~~~~~~~~i~~~~~~~~~~ 197 (426)
T d1hzua2 123 TIAGAYWPPQFAIMDGETLEPK-QIVSTRG--MTVDTQTYHPEPRVAAIIASHEH--PEFIVNVKETGKVLLVNYKDIDN 197 (426)
T ss_dssp EEEEEEESSEEEEEETTTCCEE-EEEECCE--ECSSSCCEESCCCEEEEEECSSS--SEEEEEETTTTEEEEEECSSSSS
T ss_pred EEEEECCCCEEEEECCCCCCEE-EEEECCC--CCCCCEEECCCCCEEEEEECCCC--CEEEEECCCCCEEEEEEECCCCC
T ss_conf 9996358976999857764125-7862267--77364364278850389987878--78888527897699999246652
Q ss_pred CCEECCCCCCCCEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCCCCEEECCCCC-CCCEEEEECCCCCCCCCCCCCC-E
Q ss_conf 43000588876638999969998999992-7993999968889643526503568-8314896459999754468998-8
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGS-SRGVLTLWDLRFLVPVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARP-L 1357 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGs-~dG~I~iWDlr~~~~i~s~~~~~~~-~I~~l~~~~p~~~~~~~s~~~~-~ 1357 (1553)
...-.. .+...+..+.++|++++++++. .+..+.+||...+..+..+...... +.....+..+.. +. .
T Consensus 198 ~~~~~~-~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 268 (426)
T d1hzua2 198 LTVTSI-GAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKY--------GPVW 268 (426)
T ss_dssp CEEEEE-ECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTT--------EEEE
T ss_pred EEEEEE-CCCCCCEEEEECCCCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCC--------CCEE
T ss_conf 045775-6677537613778886788642011000000025562788750587444342011006987--------7457
Q ss_pred EEEEECCCEEEEEECCCC-------CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999976993999995888-------1899986146899876677763235899889998632224453222233389998
Q 000410 1358 IYVAAGCNEVSLWNAENG-------SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPP 1430 (1553)
Q Consensus 1358 i~s~s~dg~I~iWDi~tg-------~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1430 (1553)
.+..++++.+.+|+.... ++...+. +
T Consensus 269 ~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~-----------------------------------------------g 301 (426)
T d1hzua2 269 STSHLGDGSISLIGTDPKNHPQYAWKKVAELQ-----------------------------------------------G 301 (426)
T ss_dssp EEECTTTCEEEEEECCTTTCTTTBTSEEEEEE-----------------------------------------------C
T ss_pred EECCCCCCEEEEEECCCCCCCCCCCEEEEEEE-----------------------------------------------C
T ss_conf 74157896598852256652033025868986-----------------------------------------------6
Q ss_pred CCCCCEEECCCCCC-EEE-------ECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCC
Q ss_conf 86681782338999-089-------8169981999839999996497189988988984078860587099993205886
Q 000410 1431 RLLGIRSLLPLPGG-DLL-------TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPL 1502 (1553)
Q Consensus 1431 ~~~~V~sl~~sp~g-~Ll-------Tgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 1502 (1553)
|...+++++|+|++ +++ +++.|++|++||+.+++..+.+....
T Consensus 302 ~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~----------------------------- 352 (426)
T d1hzua2 302 QGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA----------------------------- 352 (426)
T ss_dssp SSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH-----------------------------
T ss_pred CCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCC-----------------------------
T ss_conf 887636787489986188850679880228879999898787670895021-----------------------------
Q ss_pred CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEE-EEE----CCCCEEEECC
Q ss_conf 40234788886520176688753045875220698199-998----0895289829
Q 000410 1503 TSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLL-ISS----SRDGAIKVWK 1553 (1553)
Q Consensus 1503 ~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~L-vSa----s~DG~IkVWk 1553 (1553)
....+..|...|..+ .|+++|+.+ +|+ +.||.|+||+
T Consensus 353 -------------~~~~~~~~~~rv~~~-~fSpDGk~i~vs~~~~~~~~~~i~v~D 394 (426)
T d1hzua2 353 -------------EWADLGEGAKRVVQP-EYNKRGDEVWFSVWNGKNDSSALVVVD 394 (426)
T ss_dssp -------------HHHCCCSSCCCEEEE-EECSSSSEEEEEECCCTTSCCEEEEEE
T ss_pred -------------HHCCCCCCCCCEEEE-EECCCCCEEEEEEECCCCCCCEEEEEE
T ss_conf -------------102567788518987-999999999999724888898299999
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.88 E-value=6.8e-20 Score=152.68 Aligned_cols=337 Identities=11% Similarity=0.001 Sum_probs=188.6
Q ss_pred CCCCCC-CCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCE
Q ss_conf 885557-5375450224457459999079979999939995999948977533322220356417971289998329869
Q 000410 1123 SGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~p~-G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~ 1201 (1553)
..|+.. |++++++..|. .+..++|||||+++++++.||++++||+.+++..... .......|.+.+.+..|+|+|+.
T Consensus 45 ~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~-~i~~~~~~~~~~~s~~~SpDG~~ 122 (432)
T d1qksa2 45 ALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA-EIKIGSEARSIETSKMEGWEDKY 122 (432)
T ss_dssp EEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE-EEECCSEEEEEEECCSTTCTTTE
T ss_pred EEEECCCCCEEEEEECCC-CEEEEEECCCCCEEEEECCCCCEEEEEEECCCCEEEE-EEECCCCCCCEEEECCCCCCCCE
T ss_conf 999899983999973799-7137998899999999828999789981089812889-98448898776984321888888
Q ss_pred E-EEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC
Q ss_conf 9-998079939999933125688864334564342100269984899998127998503999995896399996998964
Q 000410 1202 V-VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1202 l-vs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~ 1280 (1553)
+ ++++.+++|++||..+.... ........ ...............+.+++++ ...+++...++.|.+||..+.+.
T Consensus 123 l~vs~~~~~~v~i~d~~t~~~~-~~~~~~~~--~~~~~~~~~~~~~~~v~~s~dg--~~~~vs~~~~~~i~~~d~~~~~~ 197 (432)
T d1qksa2 123 AIAGAYWPPQYVIMDGETLEPK-KIQSTRGM--TYDEQEYHPEPRVAAILASHYR--PEFIVNVKETGKILLVDYTDLNN 197 (432)
T ss_dssp EEEEEEETTEEEEEETTTCCEE-EEEECCEE--CTTTCCEESCCCEEEEEECSSS--SEEEEEETTTTEEEEEETTCSSE
T ss_pred EEEECCCCCEEEEEECCCCCCE-EEECCCCC--CCCCEECCCCCCEEEEEECCCC--CEEEEEECCCCEEEEEECCCCCC
T ss_conf 9998178982799907655422-54024776--4352201688850589987899--98999981688299998437875
Q ss_pred CCEECCCCCCCCEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCCCCEEECCCCCC--CCEEEEECCCCCCCCCCCCCCE
Q ss_conf 430005888766389999699989999927-9939999688896435265035688--3148964599997544689988
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSS-RGVLTLWDLRFLVPVNSWQYSQVCP--IEKMCLFVPPPNAAVSTTARPL 1357 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~-dG~I~iWDlr~~~~i~s~~~~~~~~--I~~l~~~~p~~~~~~~s~~~~~ 1357 (1553)
...... .+...+..+.++|+|+++++++. ++.+.+||.+....+.......... .....+..+ ..++.
T Consensus 198 ~~~~~i-~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~--------~~g~~ 268 (432)
T d1qksa2 198 LKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHP--------TFGPV 268 (432)
T ss_dssp EEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEET--------TTEEE
T ss_pred CEEEEE-CCCCCCCCCEECCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEECC--------CCCCE
T ss_conf 227998-336754265388988799995166636777614452688872148622456766410148--------98831
Q ss_pred EEEE-ECCCEEEEEECCCCC-------EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999-769939999958881-------89998614689987667776323589988999863222445322223338999
Q 000410 1358 IYVA-AGCNEVSLWNAENGS-------CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1429 (1553)
Q Consensus 1358 i~s~-s~dg~I~iWDi~tg~-------~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1429 (1553)
..+. .+++.+.+|+..... ....+........ .....+ ....++......
T Consensus 269 ~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~-------------~~~s~p---------~~~~lw~~~~~~ 326 (432)
T d1qksa2 269 WATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSL-------------FIKTHP---------NSQYLYVDATLN 326 (432)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC-------------CEECCT---------TCSEEEEECTTC
T ss_pred ECCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCEE-------------EEEECC---------CCCCEEECCCCC
T ss_conf 0213568835876245665554656577799886899768-------------887268---------864102112678
Q ss_pred CCCCCCEEECCCCCC-EEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHH
Q ss_conf 886681782338999-0898169981999839999996497189988988984078860587099993205886402347
Q 000410 1430 PRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTA 1508 (1553)
Q Consensus 1430 ~~~~~V~sl~~sp~g-~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~ 1508 (1553)
.+.....++++ |++ .+.+++.|+.+++||+.+..
T Consensus 327 ~~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~-------------------------------------------- 361 (432)
T d1qksa2 327 PEAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWA-------------------------------------------- 361 (432)
T ss_dssp SSHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHH--------------------------------------------
T ss_pred CCCCEEEEEEE-EECHHHCCCCCCCCEEECCCCCCC--------------------------------------------
T ss_conf 88770359999-962461045567844863343444--------------------------------------------
Q ss_pred HHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEE-----CCCCEEEECC
Q ss_conf 88886520176688753045875220698199998-----0895289829
Q 000410 1509 KAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISS-----SRDGAIKVWK 1553 (1553)
Q Consensus 1509 ~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~LvSa-----s~DG~IkVWk 1553 (1553)
.+..|...+..+ .|+++|+.++.+ +.+|.|+||+
T Consensus 362 ----------~l~~~~~~v~~~-~fS~DG~~v~~S~~~~~~~~g~i~i~D 400 (432)
T d1qksa2 362 ----------GITEGQPRVVQG-EFNKDGTEVWFSVWNGKDQESALVVVD 400 (432)
T ss_dssp ----------TCCSSCCEEEEE-EECTTSSEEEEEEECCTTSCCEEEEEE
T ss_pred ----------CCCCCCCCEEEE-EECCCCCEEEEEEECCCCCCCCEEEEE
T ss_conf ----------457899868976-798999999999704888888689999
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.85 E-value=2.5e-17 Score=134.42 Aligned_cols=260 Identities=12% Similarity=0.081 Sum_probs=180.8
Q ss_pred CCCCC-CCCEEEECCCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC
Q ss_conf 88555-753754502244574599990799799-9993999599994897753332222035641797128999832986
Q 000410 1123 SGWRP-RGILVAHLQEHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1123 ~~W~p-~G~lv~~l~~H~~~V~~i~~spd~~~l-aSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~ 1200 (1553)
..|++ .|++++++... +.+..++|+||++++ ++++.++.|++||..+++ ...+...+.. +..+.|.+++.
T Consensus 15 ~v~D~~t~~~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~------~~~~~~~~~~-~~~~~~~~~~~ 86 (301)
T d1l0qa2 15 SVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN------VIATVPAGSS-PQGVAVSPDGK 86 (301)
T ss_dssp EEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE------EEEEEECSSS-EEEEEECTTSS
T ss_pred EEEECCCCEEEEEEECC-CCCEEEEEECCCCEEEEEECCCCEEEEEECCCCC------EEEEEECCCC-CCCCCCCCCCC
T ss_conf 99999999599999889-9836999928989999997899989999999894------1032000246-43110001111
Q ss_pred EEEE-EECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCC
Q ss_conf 9999-807993999993312568886433456434210026998489999812799850399999589639999699896
Q 000410 1201 QVVV-GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1279 (1553)
Q Consensus 1201 ~lvs-~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~ 1279 (1553)
.+++ +..++.+.+|+..... ..... .......++.+++++ ..+++++..++.+.+||..+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~--~~~~~~~~~~~~~dg--~~~~~~~~~~~~~~~~~~~~~~ 149 (301)
T d1l0qa2 87 QVYVTNMASSTLSVIDTTSNT-------------VAGTV--KTGKSPLGLALSPDG--KKLYVTNNGDKTVSVINTVTKA 149 (301)
T ss_dssp EEEEEETTTTEEEEEETTTTE-------------EEEEE--ECSSSEEEEEECTTS--SEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCCCCCCCEEEECCCCCCE-------------EEEEC--CCCCCCEEEEEECCC--CEEEEEECCCCCEEEEECCCCC
T ss_conf 111111111001100124302-------------43202--444442378760589--7155420111100110001463
Q ss_pred CCCEECCCCCCCCEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf 4430005888766389999699989999927-993999968889643526503568831489645999975446899889
Q 000410 1280 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSS-RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1280 ~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~-dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i 1358 (1553)
....+.. ...+..+.++|++..+++++. .+.+.+|+............. .....+.+ .+. +..+
T Consensus 150 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~---------g~~~ 214 (301)
T d1l0qa2 150 VINTVSV---GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE--AAPSGIAV-NPE---------GTKA 214 (301)
T ss_dssp EEEEEEC---CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--SEEEEEEE-CTT---------SSEE
T ss_pred EEEECCC---CCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEECCCCC--CCCCEEEC-CCC---------CCCC
T ss_conf 0353156---7884288860465401310121111111111100011101335--77503110-111---------1011
Q ss_pred EEEEC---CCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99976---993999995888189998614689987667776323589988999863222445322223338999886681
Q 000410 1359 YVAAG---CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1359 ~s~s~---dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
+++.. ++.|.+||..++++...+.... .+
T Consensus 215 ~v~~~~~~~~~v~v~D~~t~~~~~~~~~~~------------------------------------------------~~ 246 (301)
T d1l0qa2 215 YVTNVDKYFNTVSMIDTGTNKITARIPVGP------------------------------------------------DP 246 (301)
T ss_dssp EEEEECSSCCEEEEEETTTTEEEEEEECCS------------------------------------------------SE
T ss_pred CCCCCCCEEEEEEEEECCCCEEEEEECCCC------------------------------------------------CE
T ss_conf 110021000023236569981999984899------------------------------------------------87
Q ss_pred EEECCCCCC-EE-EECCCCCEEEEEECCCCCCCEEEE
Q ss_conf 782338999-08-981699819998399999964971
Q 000410 1436 RSLLPLPGG-DL-LTGGTDLKIRRWDHCSPGRSYCIC 1470 (1553)
Q Consensus 1436 ~sl~~sp~g-~L-lTgg~Dg~IrlWDl~~~~~s~~i~ 1470 (1553)
++++|+|+| ++ ++++.|++|++||+.+++....+.
T Consensus 247 ~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~ 283 (301)
T d1l0qa2 247 AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283 (301)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEE
T ss_conf 7999918989999998999969999999995999996
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.83 E-value=8.9e-17 Score=130.58 Aligned_cols=261 Identities=13% Similarity=0.126 Sum_probs=181.5
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE-EEEECCCCEEEEEEEECCCCCCCCCCCCC
Q ss_conf 99999399959999489775333222203564179712899983298699-99807993999993312568886433456
Q 000410 1153 FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV-VVGACDGIIHMFSVDHISRGLGNVEKYSG 1231 (1553)
Q Consensus 1153 ~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~l-vs~s~DGsI~iwdi~~~~~~~~~~~~~~~ 1231 (1553)
.+++++.|++|.|||+.+++ ...++... ..+..++|+|+++.+ ++++.++.|++||+.+..
T Consensus 4 ~yV~~~~~~~v~v~D~~t~~------~~~~i~~g-~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~----------- 65 (301)
T d1l0qa2 4 AYIANSESDNISVIDVTSNK------VTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN----------- 65 (301)
T ss_dssp EEEEETTTTEEEEEETTTTE------EEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE-----------
T ss_pred EEEEECCCCEEEEEECCCCE------EEEEEECC-CCCEEEEEECCCCEEEEEECCCCEEEEEECCCCC-----------
T ss_conf 99997899989999999995------99999889-9836999928989999997899989999999894-----------
Q ss_pred CCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCEEEEEECCCCCEEE-EEEC
Q ss_conf 434210026998489999812799850399999589639999699896443000588876638999969998999-9927
Q 000410 1232 ISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFV-SGSS 1310 (1553)
Q Consensus 1232 ~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~Lv-sGs~ 1310 (1553)
.+.... .+. ....+.+++++ ...++++..++.+.+||..+++....+.. ...+.+++++|++..++ ++..
T Consensus 66 --~~~~~~-~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dg~~~~~~~~~ 136 (301)
T d1l0qa2 66 --VIATVP-AGS-SPQGVAVSPDG--KQVYVTNMASSTLSVIDTTSNTVAGTVKT---GKSPLGLALSPDGKKLYVTNNG 136 (301)
T ss_dssp --EEEEEE-CSS-SEEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEETT
T ss_pred --EEEEEE-CCC-CCCCCCCCCCC--CCCCCCCCCCCEEEECCCCCCEEEEECCC---CCCCEEEEEECCCCEEEEEECC
T ss_conf --103200-024-64311000111--11111111110011001243024320244---4442378760589715542011
Q ss_pred CCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEC-CCEEEEEECCCCCEEEEEECCCCCCC
Q ss_conf 99399996888964352650356883148964599997544689988999976-99399999588818999861468998
Q 000410 1311 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG-CNEVSLWNAENGSCHQVLRTANYDGD 1389 (1553)
Q Consensus 1311 dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~-dg~I~iWDi~tg~~~~~l~~~~~~~~ 1389 (1553)
++.+.+||......+...... .....+.+ .+. +..++++.. .+.+.+|+.........+....
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 200 (301)
T d1l0qa2 137 DKTVSVINTVTKAVINTVSVG--RSPKGIAV-TPD---------GTKVYVANFDSMSISVIDTVTNSVIDTVKVEA---- 200 (301)
T ss_dssp TTEEEEEETTTTEEEEEEECC--SSEEEEEE-CTT---------SSEEEEEETTTTEEEEEETTTTEEEEEEECSS----
T ss_pred CCCEEEEECCCCCEEEECCCC--CCCEEEEE-ECC---------CCCEEEECCCCCCCCCCCCCCEEEEECCCCCC----
T ss_conf 110011000146303531567--88428886-046---------54013101211111111111000111013357----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-EEE---ECCCCCEEEEEECCCCCC
Q ss_conf 7667776323589988999863222445322223338999886681782338999-089---816998199983999999
Q 000410 1390 TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL---TGGTDLKIRRWDHCSPGR 1465 (1553)
Q Consensus 1390 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~Ll---Tgg~Dg~IrlWDl~~~~~ 1465 (1553)
....+++++++ .++ .++.++.|++||+.+++.
T Consensus 201 --------------------------------------------~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~ 236 (301)
T d1l0qa2 201 --------------------------------------------APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI 236 (301)
T ss_dssp --------------------------------------------EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred --------------------------------------------CCCEEECCCCCCCCCCCCCCCEEEEEEEEECCCCEE
T ss_conf --------------------------------------------750311011110111100210000232365699819
Q ss_pred CEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEE-EEEC
Q ss_conf 649718998898898407886058709999320588640234788886520176688753045875220698199-9980
Q 000410 1466 SYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLL-ISSS 1544 (1553)
Q Consensus 1466 s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~~~~L-vSas 1544 (1553)
...+. +...+.++ +|++++++| ++++
T Consensus 237 ~~~~~----------------------------------------------------~~~~~~~v-a~spdg~~l~va~~ 263 (301)
T d1l0qa2 237 TARIP----------------------------------------------------VGPDPAGI-AVTPDGKKVYVALS 263 (301)
T ss_dssp EEEEE----------------------------------------------------CCSSEEEE-EECTTSSEEEEEET
T ss_pred EEEEC----------------------------------------------------CCCCEEEE-EEECCCCEEEEEEC
T ss_conf 99984----------------------------------------------------89987799-99189899999989
Q ss_pred CCCEEEECC
Q ss_conf 895289829
Q 000410 1545 RDGAIKVWK 1553 (1553)
Q Consensus 1545 ~DG~IkVWk 1553 (1553)
.||.|+||+
T Consensus 264 ~~~~i~v~D 272 (301)
T d1l0qa2 264 FCNTVSVID 272 (301)
T ss_dssp TTTEEEEEE
T ss_pred CCCEEEEEE
T ss_conf 999699999
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.82 E-value=6.3e-17 Score=131.65 Aligned_cols=280 Identities=9% Similarity=0.012 Sum_probs=159.8
Q ss_pred CCCCCC-CCE-----EEECCCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCC------
Q ss_conf 885557-537-----54502244574599990799799-99939995999948977533322220356417971------
Q 000410 1123 SGWRPR-GIL-----VAHLQEHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSR------ 1189 (1553)
Q Consensus 1123 ~~W~p~-G~l-----v~~l~~H~~~V~~i~~spd~~~l-aSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~------ 1189 (1553)
..|+.. +++ +....+|.+.+.+++|+|||+++ ++++.++++++||...+.. ......+...
T Consensus 86 ~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~------~~~~~~~~~~~~~~~~ 159 (426)
T d1hzua2 86 DMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP------KQIVSTRGMTVDTQTY 159 (426)
T ss_dssp EEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE------EEEEECCEECSSSCCE
T ss_pred EEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCCE------EEEEECCCCCCCCEEE
T ss_conf 9997568860489998678887645885002688987999635897699985776412------5786226777364364
Q ss_pred -----EEEEEEECCCCEEEEEEC-CCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEE-EE
Q ss_conf -----289998329869999807-99399999331256888643345643421002699848999981279985039-99
Q 000410 1190 -----ALCTMMLRHSAQVVVGAC-DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHM-FM 1262 (1553)
Q Consensus 1190 -----I~~i~f~~~~~~lvs~s~-DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~-L~ 1262 (1553)
...+.+.+++..++.... .+.+.+++... ...........+.....+.++++ +++ ++
T Consensus 160 ~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~ 223 (426)
T d1hzua2 160 HPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD-------------IDNLTVTSIGAAPFLADGGWDSS---HRYFMT 223 (426)
T ss_dssp ESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSS-------------SSSCEEEEEECCSSEEEEEECTT---SCEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECC-------------CCCEEEEEECCCCCCEEEEECCC---CCEEEE
T ss_conf 27885038998787878888527897699999246-------------65204577566775376137788---867886
Q ss_pred EEECCCEEEEEECCCCCCCCEECCCCCCCCEEEEEECCCC-C--EEEEEECCCCEEEEECCCCC-------CCCEEECCC
Q ss_conf 9958963999969989644300058887663899996999-8--99999279939999688896-------435265035
Q 000410 1263 YSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCG-N--WFVSGSSRGVLTLWDLRFLV-------PVNSWQYSQ 1332 (1553)
Q Consensus 1263 ~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g-~--~LvsGs~dG~I~iWDlr~~~-------~i~s~~~~~ 1332 (1553)
+...+..+.++|..+++.........+........+...+ . +.+....++.+.+|+..... ....+.. |
T Consensus 224 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g-~ 302 (426)
T d1hzua2 224 AANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG-Q 302 (426)
T ss_dssp EETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEEC-S
T ss_pred EEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEEC-C
T ss_conf 420110000000255627887505874443420110069877457741578965988522566520330258689866-8
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCEEEEE-------ECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68831489645999975446899889999-------76993999995888189998614689987667776323589988
Q 000410 1333 VCPIEKMCLFVPPPNAAVSTTARPLIYVA-------AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSR 1405 (1553)
Q Consensus 1333 ~~~I~~l~~~~p~~~~~~~s~~~~~i~s~-------s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 1405 (1553)
...+..+. +++++.++++. +.++.|.+||+.++++...+.....
T Consensus 303 ~~~v~~v~----------~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~------------------- 353 (426)
T d1hzua2 303 GGGSLFIK----------THPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAE------------------- 353 (426)
T ss_dssp SSCCCCEE----------CCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHH-------------------
T ss_pred CCCEEEEE----------CCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEECCCH-------------------
T ss_conf 87636787----------4899861888506798802288799998987876708950211-------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCE-E-EEC----CCCCEEEEEECCCCCCCEEEECCC
Q ss_conf 9998632224453222233389998866817823389990-8-981----699819998399999964971899
Q 000410 1406 SNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGD-L-LTG----GTDLKIRRWDHCSPGRSYCICGPN 1473 (1553)
Q Consensus 1406 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~-L-lTg----g~Dg~IrlWDl~~~~~s~~i~g~~ 1473 (1553)
......+...|.+++|+|+|. + +++ +.|+.|++||..+.+...++.+..
T Consensus 354 -------------------~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~ 408 (426)
T d1hzua2 354 -------------------WADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR 408 (426)
T ss_dssp -------------------HHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred -------------------HCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEECCCC
T ss_conf -------------------0256778851898799999999999972488889829999999873899987898
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.82 E-value=1.5e-17 Score=136.01 Aligned_cols=152 Identities=11% Similarity=0.061 Sum_probs=101.8
Q ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCCEEEE--CCCCCEEEEEEECCCCEE-EEEECCCCEEEEEEEECCCCCCCCCC
Q ss_conf 799999399959999489775333222203564--179712899983298699-99807993999993312568886433
Q 000410 1152 SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYH--LEGSRALCTMMLRHSAQV-VVGACDGIIHMFSVDHISRGLGNVEK 1228 (1553)
Q Consensus 1152 ~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~--~h~~~I~~i~f~~~~~~l-vs~s~DGsI~iwdi~~~~~~~~~~~~ 1228 (1553)
+|++|++.|++|+|||..+++. ..+.. .++..+.+++|+|+++.+ ++++.+|.|.+||+.+.. .
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~------~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~-----~-- 68 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAV------DKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE-----T-- 68 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE------EEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC-----E--
T ss_pred EEEEEECCCCEEEEEECCCCEE------EEEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCC-----E--
T ss_conf 6999976799899999999949------99998778899823799999989999997899949999999992-----9--
Q ss_pred CCCCCCCEECCCCC----CCEEEEEEECCCCCCCEEEEEEE------------CCCEEEEEECCCCCCCCEECCCCCCCC
Q ss_conf 45643421002699----84899998127998503999995------------896399996998964430005888766
Q 000410 1229 YSGISDIKKKDTKE----GAIVTLVNYNTDNCASHMFMYST------------QNCGIHLWDTRSNSNTWTLKAIPEEGY 1292 (1553)
Q Consensus 1229 ~~~~~~~~~~~~~~----~~~v~~i~~~~~~~s~~~L~~~s------------~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1292 (1553)
+....... +.....++++++ +..++.+. .++.+.+||..+++....+.. ...
T Consensus 69 ------~~~~~~~~~~~~~~~~~~v~~s~d---g~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~ 136 (337)
T d1pbyb_ 69 ------LGRIDLSTPEERVKSLFGAALSPD---GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---PRQ 136 (337)
T ss_dssp ------EEEEECCBTTEEEECTTCEEECTT---SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---CSS
T ss_pred ------EEEEECCCCCCCCCCEEEEEECCC---CCEEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEEECCC---CCC
T ss_conf ------888724777312540254898687---75799950477620342034555212035667759884145---687
Q ss_pred EEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC
Q ss_conf 38999969998999992799399996888964352650
Q 000410 1293 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY 1330 (1553)
Q Consensus 1293 Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~ 1330 (1553)
+++++++|++.++++++. ...+||...+.....+..
T Consensus 137 ~~~~~~s~dg~~l~~~~~--~~~~~d~~~~~~~~~~~~ 172 (337)
T d1pbyb_ 137 ITMLAWARDGSKLYGLGR--DLHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp CCCEEECTTSSCEEEESS--SEEEEETTTTEEEEEECS
T ss_pred CEEEEECCCCCEEEEECC--CCCEEEEECCCEEEEEEC
T ss_conf 218998688888999717--750566303727888614
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.81 E-value=5e-20 Score=153.66 Aligned_cols=137 Identities=16% Similarity=0.115 Sum_probs=102.6
Q ss_pred EEEEEEEECCCCEEEEEEEECCC-EEEEEEEECCCCC-------------CCHHHHHHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 69998850257099999998895-5999999516997-------------478999999999999996189997548879
Q 000410 27 LVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDY-------------IDLREYERRLFHIRETFRSIDHPHVWAFQF 92 (1553)
Q Consensus 27 y~~~~~LG~G~f~~V~~a~~~~~-~vavKv~~k~~~~-------------~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~ 92 (1553)
+.+++.||+|+||.||+|++.++ .||+|++...... ............|...+..+.|++++..++
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~ 81 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA 81 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred CHHCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 02277802485659999997999999999986044346665565630008889999997789999999816999144998
Q ss_pred EEEECCEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCC
Q ss_conf 99808879999035359988886099999999999999999999999998898525788996899139929994137632
Q 000410 93 WQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 93 ~~~~~~~~~LV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k 172 (1553)
+.. .+++|||+++..... ++......++.|++.++.+||++||+||||||+|||++. +.++|+|||.++
T Consensus 82 ~~~----~~lvme~~~~~~~~~------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~-~~~~liDFG~a~ 150 (191)
T d1zara2 82 WEG----NAVLMELIDAKELYR------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE-EGIWIIDFPQSV 150 (191)
T ss_dssp EET----TEEEEECCCCEEGGG------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET-TEEEECCCTTCE
T ss_pred ECC----CEEEEEEECCCCCCC------HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEEC-CCEEEEECCCCC
T ss_conf 628----889999504565420------015789999999999999982688898368903611428-989998778843
Q ss_pred CC
Q ss_conf 12
Q 000410 173 PT 174 (1553)
Q Consensus 173 ~~ 174 (1553)
..
T Consensus 151 ~~ 152 (191)
T d1zara2 151 EV 152 (191)
T ss_dssp ET
T ss_pred CC
T ss_conf 08
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.80 E-value=2.5e-18 Score=141.61 Aligned_cols=161 Identities=11% Similarity=0.071 Sum_probs=103.5
Q ss_pred EEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEE-CCCCCEEEEEEECCCCEE-EEEECCCCEEEEEEEECCCC
Q ss_conf 9990799799999399959999489775333222203564-179712899983298699-99807993999993312568
Q 000410 1145 IAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYH-LEGSRALCTMMLRHSAQV-VVGACDGIIHMFSVDHISRG 1222 (1553)
Q Consensus 1145 i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~-~h~~~I~~i~f~~~~~~l-vs~s~DGsI~iwdi~~~~~~ 1222 (1553)
++++++++++++++.|++|.+||+.+++ ...++. .+...+.+++|+|+++.+ ++++.++.|.+||+.+..
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~------~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~-- 73 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDT------VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK-- 73 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTE------EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--
T ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCC------EEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCE--
T ss_conf 5588999699998699979999999998------99999948999704599978989999997899939999675671--
Q ss_pred CCCCCCCCCCCCCEECCC--CC---CCEEEEEEECCCCCCCEEEEEEE------------CCCEEEEEECCCCCCCCEEC
Q ss_conf 886433456434210026--99---84899998127998503999995------------89639999699896443000
Q 000410 1223 LGNVEKYSGISDIKKKDT--KE---GAIVTLVNYNTDNCASHMFMYST------------QNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1223 ~~~~~~~~~~~~~~~~~~--~~---~~~v~~i~~~~~~~s~~~L~~~s------------~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
. ...... .. ......++++++ +..++++. .++.+.+||..+++....+.
T Consensus 74 ---~--------~~~~~~~~~~~~~~~~~~~v~~s~D---G~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 139 (346)
T d1jmxb_ 74 ---N--------TFHANLSSVPGEVGRSMYSFAISPD---GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR 139 (346)
T ss_dssp ---E--------EEEEESCCSTTEEEECSSCEEECTT---SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE
T ss_pred ---E--------EEEECCCCCCCCCCCCEEEEEEECC---CCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEE
T ss_conf ---3--------1231036543454774179999058---8889997057752156514676248998525632656887
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEEC
Q ss_conf 588876638999969998999992799399996888964352650
Q 000410 1286 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY 1330 (1553)
Q Consensus 1286 ~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~ 1330 (1553)
.......+..+.+++++..++. ++.+.+||...+..+..+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 181 (346)
T d1jmxb_ 140 TFPMPRQVYLMRAADDGSLYVA---GPDIYKMDVKTGKYTVALPL 181 (346)
T ss_dssp EEECCSSCCCEEECTTSCEEEE---SSSEEEECTTTCCEEEEECS
T ss_pred EEECCCCEEEEEECCCCEEEEE---CCCCEEEECCCCCEEEEEEC
T ss_conf 3102474399995278789984---79626998069978999964
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.79 E-value=4.7e-16 Score=125.47 Aligned_cols=200 Identities=13% Similarity=0.059 Sum_probs=96.1
Q ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCC
Q ss_conf 79999939995999948977533322220356417971289998329869999807993999993312568886433456
Q 000410 1152 SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSG 1231 (1553)
Q Consensus 1152 ~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~ 1231 (1553)
-++++.++||+|.|||..+++ ...++..+. .+..++|+|+|+.+++++.||++++||+.+...
T Consensus 33 ~~~v~~~d~g~v~v~D~~t~~------v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~---------- 95 (432)
T d1qksa2 33 LFSVTLRDAGQIALIDGSTYE------IKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP---------- 95 (432)
T ss_dssp EEEEEETTTTEEEEEETTTCC------EEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSC----------
T ss_pred EEEEEECCCCEEEEEECCCCC------EEEEEECCC-CEEEEEECCCCCEEEEECCCCCEEEEEEECCCC----------
T ss_conf 899997699979999899983------999973799-713799889999999982899978998108981----------
Q ss_pred CCCCEECC--CCCCCEEEEEEECCCCCCCE-EEEEEECCCEEEEEECCCCCCCCEECCC---------CCCCCEEEEEEC
Q ss_conf 43421002--69984899998127998503-9999958963999969989644300058---------887663899996
Q 000410 1232 ISDIKKKD--TKEGAIVTLVNYNTDNCASH-MFMYSTQNCGIHLWDTRSNSNTWTLKAI---------PEEGYVSSLVTG 1299 (1553)
Q Consensus 1232 ~~~~~~~~--~~~~~~v~~i~~~~~~~s~~-~L~~~s~dg~I~iwDlrt~~~~~~l~~~---------~h~g~Itsi~~s 1299 (1553)
....... ..+...+....|+|+ |+ +++++..++.|.+||..+++....+..+ .+.+....+.++
T Consensus 96 -~~~~~i~~~~~~~~~~~s~~~SpD---G~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s 171 (432)
T d1qksa2 96 -TTVAEIKIGSEARSIETSKMEGWE---DKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 171 (432)
T ss_dssp -CEEEEEECCSEEEEEEECCSTTCT---TTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred -EEEEEEECCCCCCCEEEECCCCCC---CCEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEECCCCCCEEEEEEC
T ss_conf -288998448898776984321888---8889998178982799907655422540247764352201688850589987
Q ss_pred CCCCEE-EEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEC-CCEEEEEECCCCCE
Q ss_conf 999899-9992799399996888964352650356883148964599997544689988999976-99399999588818
Q 000410 1300 PCGNWF-VSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG-CNEVSLWNAENGSC 1377 (1553)
Q Consensus 1300 p~g~~L-vsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~-dg~I~iWDi~tg~~ 1377 (1553)
|++..+ ++...++.+.+||.........+..+.....+.+.+ +|+ ++++++++. ++.+.+||..+++.
T Consensus 172 ~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~-spd---------g~~~~va~~~~~~v~v~d~~~~~~ 241 (432)
T d1qksa2 172 HYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGL-DGS---------HRYFITAANARNKLVVIDTKEGKL 241 (432)
T ss_dssp SSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEE-CTT---------SCEEEEEEGGGTEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCEE-CCC---------CCEEEEECCCCCEEEEEECCCCEE
T ss_conf 8999899998168829999843787522799833675426538-898---------879999516663677761445268
Q ss_pred EEEEE
Q ss_conf 99986
Q 000410 1378 HQVLR 1382 (1553)
Q Consensus 1378 ~~~l~ 1382 (1553)
...+.
T Consensus 242 ~~~~~ 246 (432)
T d1qksa2 242 VAIED 246 (432)
T ss_dssp EEEEE
T ss_pred EEEEC
T ss_conf 88721
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.73 E-value=5e-16 Score=125.25 Aligned_cols=263 Identities=8% Similarity=-0.025 Sum_probs=163.1
Q ss_pred CCCCC-CCCEEEECCC--CCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECC-----CCCEEEE
Q ss_conf 88555-7537545022--44574599990799799-99939995999948977533322220356417-----9712899
Q 000410 1123 SGWRP-RGILVAHLQE--HCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLE-----GSRALCT 1193 (1553)
Q Consensus 1123 ~~W~p-~G~lv~~l~~--H~~~V~~i~~spd~~~l-aSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h-----~~~I~~i 1193 (1553)
..|+. ++++++.+.. +...+..++|+||++++ ++++.||.|.+||+.+++.. .....+ ...+..+
T Consensus 14 ~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~------~~~~~~~~~~~~~~~~~v 87 (337)
T d1pbyb_ 14 VVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL------GRIDLSTPEERVKSLFGA 87 (337)
T ss_dssp EEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEE------EEEECCBTTEEEECTTCE
T ss_pred EEEECCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCEE------EEEECCCCCCCCCCEEEE
T ss_conf 99999999499999877889982379999998999999789994999999999298------887247773125402548
Q ss_pred EEECCCCEEEEEECC------------CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEE
Q ss_conf 983298699998079------------93999993312568886433456434210026998489999812799850399
Q 000410 1194 MMLRHSAQVVVGACD------------GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMF 1261 (1553)
Q Consensus 1194 ~f~~~~~~lvs~s~D------------GsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L 1261 (1553)
+|+|+++.+++++.+ +.+.+|+..+. ..... ......+..++++++ +..+
T Consensus 88 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------------~~~~~-~~~~~~~~~~~~s~d---g~~l 149 (337)
T d1pbyb_ 88 ALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETL--------------SRRKA-FEAPRQITMLAWARD---GSKL 149 (337)
T ss_dssp EECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTT--------------EEEEE-EECCSSCCCEEECTT---SSCE
T ss_pred EECCCCCEEEEEECCCCCEEEECCCCCCCEEECCCCCC--------------EEEEE-CCCCCCCEEEEECCC---CCEE
T ss_conf 98687757999504776203420345552120356677--------------59884-145687218998688---8889
Q ss_pred EEEECCCEEEEEECCCCCCCCEECCCCCCC---------------------CEEEEEECCCCCEEEEEECCCCEEEEECC
Q ss_conf 999589639999699896443000588876---------------------63899996999899999279939999688
Q 000410 1262 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEG---------------------YVSSLVTGPCGNWFVSGSSRGVLTLWDLR 1320 (1553)
Q Consensus 1262 ~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g---------------------~Itsi~~sp~g~~LvsGs~dG~I~iWDlr 1320 (1553)
++++.+ +.+||..+++....+....... .........+......++.++.+.+||..
T Consensus 150 ~~~~~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (337)
T d1pbyb_ 150 YGLGRD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp EEESSS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred EEECCC--CCEEEEECCCEEEEEECCCCCCCCEECCCCCEEECCCCCCCEEEEEEEEEEECCCEEEECCCCCCEEEEECC
T ss_conf 997177--505663037278886147754331135776314014665312466324441036604540367617999868
Q ss_pred CCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 89643526503568831489645999975446899889999769939999958881899986146899876677763235
Q 000410 1321 FLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFA 1400 (1553)
Q Consensus 1321 ~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~ 1400 (1553)
.+........++........+ .+. +..++++ ++.+.+||+.++++...+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~--~~~i~v~d~~~~~~~~~~~~~---------------- 279 (337)
T d1pbyb_ 228 TGEMAMREVRIMDVFYFSTAV-NPA---------KTRAFGA--YNVLESFDLEKNASIKRVPLP---------------- 279 (337)
T ss_dssp TCCEEEEEEEECSSCEEEEEE-CTT---------SSEEEEE--ESEEEEEETTTTEEEEEEECS----------------
T ss_pred CCCEEEEEECCCCCCEEEEEE-CCC---------CEEEEEC--CCCEEEEECCCCCEEEEECCC----------------
T ss_conf 885888983288750588874-266---------1399973--552899989889699997489----------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-EEEECCCCCEEEEEECCCCCCCEEEEC
Q ss_conf 89988999863222445322223338999886681782338999-089816998199983999999649718
Q 000410 1401 RPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICG 1471 (1553)
Q Consensus 1401 ~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~LlTgg~Dg~IrlWDl~~~~~s~~i~g 1471 (1553)
..+.+++|+|+| .+++++.|+.|++||..+.+....+.-
T Consensus 280 --------------------------------~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~ 319 (337)
T d1pbyb_ 280 --------------------------------HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp --------------------------------SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred --------------------------------CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC
T ss_conf --------------------------------9889999978999999994999299999998769899988
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.73 E-value=2.5e-13 Score=106.11 Aligned_cols=270 Identities=11% Similarity=0.058 Sum_probs=165.5
Q ss_pred CCC-CCCCEEEECCCCCCCEEEEEECCCCCEEEEEE----------CCCCEEEEECCCCCCCCCCCCCEEEECCCCC---
Q ss_conf 855-57537545022445745999907997999993----------9995999948977533322220356417971---
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSAS----------DDSTVKVWDSRKLEKDISFRSRLTYHLEGSR--- 1189 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS----------~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~--- 1189 (1553)
.|+ ..|+++.++..+... .++|+|||+++++++ .++.|++||..+++.. .....+...
T Consensus 51 v~D~~tg~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~------~~~~~~~~~~~~ 122 (373)
T d2madh_ 51 VLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI------ADIELPDAPRFD 122 (373)
T ss_pred EEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEE------EEEECCCCCEEE
T ss_conf 9989999799999579886--07986899989999605775321245318999977789388------897268851368
Q ss_pred ----EEEEEEECCCCEEEEEE--CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEE
Q ss_conf ----28999832986999980--799399999331256888643345643421002699848999981279985039999
Q 000410 1190 ----ALCTMMLRHSAQVVVGA--CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMY 1263 (1553)
Q Consensus 1190 ----I~~i~f~~~~~~lvs~s--~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~ 1263 (1553)
...+.|++++..+++.. .++.+.+|+..... . ..+.....++.+++++ ...+++
T Consensus 123 ~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~--------------~----~~~~~~~~~~~~s~~g--~~~~v~ 182 (373)
T d2madh_ 123 VGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS--------------D----DQLLSSPTCYHIHPGA--PSTFYL 182 (373)
T ss_pred ECCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCE--------------E----EEEECCCEEEEEECCC--CCEEEE
T ss_conf 5168970899858993799998698746776236872--------------8----9982452069996289--919999
Q ss_pred EECCCEEEEEECCCCCCCCEECCC----CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECC-CCC----
Q ss_conf 958963999969989644300058----88766389999699989999927993999968889643526503-568----
Q 000410 1264 STQNCGIHLWDTRSNSNTWTLKAI----PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS-QVC---- 1334 (1553)
Q Consensus 1264 ~s~dg~I~iwDlrt~~~~~~l~~~----~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~-~~~---- 1334 (1553)
.+.|+.+.+||...+...+..... ..........+++++ .++..+.++.+.+|+............. ...
T Consensus 183 ~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (373)
T d2madh_ 183 LCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSG-RIVWPVYSGKILQADISAAGATNKAPIDALSGGRKA 261 (373)
T ss_pred ECCCCEEEEEECCCCEEEEEEEEECCCCCCCCEEEEEEECCCC-EEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEE
T ss_conf 9479939999747742667886300366753043458878994-299925896599997689907897763056475786
Q ss_pred ------CCCEEEEECCCCCC-CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------83148964599997-54468998899997699399999588818999861468998766777632358998899
Q 000410 1335 ------PIEKMCLFVPPPNA-AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSN 1407 (1553)
Q Consensus 1335 ------~I~~l~~~~p~~~~-~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~ 1407 (1553)
....+.+ +++... ......+..+++...++.+.+||..+++....+...
T Consensus 262 ~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~~~----------------------- 317 (373)
T d2madh_ 262 DTWRPGGWQQVAY-LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG----------------------- 317 (373)
T ss_pred EEECCCCCEEEEE-ECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCC-----------------------
T ss_conf 6413674133577-1499759995488824786258986999989999698986689-----------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCE--E-EECCCCCEEEEEECCCCCCCEEEEC
Q ss_conf 98632224453222233389998866817823389990--8-9816998199983999999649718
Q 000410 1408 PKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGD--L-LTGGTDLKIRRWDHCSPGRSYCICG 1471 (1553)
Q Consensus 1408 ~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~--L-lTgg~Dg~IrlWDl~~~~~s~~i~g 1471 (1553)
..+.+++|+|+|. + ++++.|+.|++||+.+++....+.+
T Consensus 318 -------------------------~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~ 359 (373)
T d2madh_ 318 -------------------------HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVE 359 (373)
T ss_pred -------------------------CCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECC
T ss_conf -------------------------982589999899989999967999299999999989999888
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.71 E-value=5.4e-16 Score=125.03 Aligned_cols=271 Identities=10% Similarity=-0.041 Sum_probs=161.5
Q ss_pred CCCCC-CCCEEEECC-CCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCC
Q ss_conf 88555-753754502-244574599990799799-999399959999489775333222203564179712899983298
Q 000410 1123 SGWRP-RGILVAHLQ-EHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1123 ~~W~p-~G~lv~~l~-~H~~~V~~i~~spd~~~l-aSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~ 1199 (1553)
..|+. +++++.++. .|...+.+++|+||++++ ++++.+++|.+||..+++.............+...+..++|++++
T Consensus 21 ~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~~~~~~~v~~s~DG 100 (346)
T d1jmxb_ 21 HVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG 100 (346)
T ss_dssp EEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS
T ss_pred EEEECCCCCEEEEEECCCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEECCC
T ss_conf 99999999899999948999704599978989999997899939999675671312310365434547741799990588
Q ss_pred CEEEEEEC------------CCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECC
Q ss_conf 69999807------------993999993312568886433456434210026998489999812799850399999589
Q 000410 1200 AQVVVGAC------------DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN 1267 (1553)
Q Consensus 1200 ~~lvs~s~------------DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~d 1267 (1553)
+.+++++. ++.+.+|+..+... ...+..... +..+....+.++ +.+++ . +
T Consensus 101 ~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~~~---~~~~~-~--~ 162 (346)
T d1jmxb_ 101 KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE----------AKPVRTFPM--PRQVYLMRAADD---GSLYV-A--G 162 (346)
T ss_dssp SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG----------BCCSEEEEC--CSSCCCEEECTT---SCEEE-E--S
T ss_pred CEEEEEECCCCCEEEEECCCCCEEEEEECCCCEE----------EEEEEEEEC--CCCEEEEEECCC---CEEEE-E--C
T ss_conf 8899970577521565146762489985256326----------568873102--474399995278---78998-4--7
Q ss_pred CEEEEEECCCCCCCCEECCCCCCCCEEEEEECCCCC--------------------------EEEEEECCCCEEEEECCC
Q ss_conf 639999699896443000588876638999969998--------------------------999992799399996888
Q 000410 1268 CGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGN--------------------------WFVSGSSRGVLTLWDLRF 1321 (1553)
Q Consensus 1268 g~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~--------------------------~LvsGs~dG~I~iWDlr~ 1321 (1553)
+.+.+||+.+++....+.. ...+..+.++|++. .+.++..++.+.+||+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (346)
T d1jmxb_ 163 PDIYKMDVKTGKYTVALPL---RNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKT 239 (346)
T ss_dssp SSEEEECTTTCCEEEEECS---TTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTT
T ss_pred CCCEEEECCCCCEEEEEEC---CCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEECCC
T ss_conf 9626998069978999964---8986623771255289998649981676512311126732575404783499997778
Q ss_pred CCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 96435265035688314896459999754468998899997699399999588818999861468998766777632358
Q 000410 1322 LVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFAR 1401 (1553)
Q Consensus 1322 ~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~ 1401 (1553)
.........++...+....+ .+. +..++... ++.+.+||..+++....+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~----------------- 291 (346)
T d1jmxb_ 240 GKTHTQEFADLTELYFTGLR-SPK---------DPNQIYGV-LNRLAKYDLKQRKLIKAANLD----------------- 291 (346)
T ss_dssp CCEEEEEEEECSSCEEEEEE-CSS---------CTTEEEEE-ESEEEEEETTTTEEEEEEECS-----------------
T ss_pred CCEEEEEEECCCCEEEEEEE-ECC---------CCEEEEEC-CCEEEEEECCCCCEEEEECCC-----------------
T ss_conf 83687876315660688897-179---------97899942-983899989999399997499-----------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-EEEECCCCCEEEEEECCCCCCCEEEECCC
Q ss_conf 9988999863222445322223338999886681782338999-08981699819998399999964971899
Q 000410 1402 PSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPN 1473 (1553)
Q Consensus 1402 p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~ 1473 (1553)
..+++++|+|+| .+++++.|+.|++||..+.+....+..+.
T Consensus 292 -------------------------------~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~ 333 (346)
T d1jmxb_ 292 -------------------------------HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 333 (346)
T ss_dssp -------------------------------SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred -------------------------------CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCC
T ss_conf -------------------------------977899996899999999489929999996587979998899
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=2.4e-14 Score=113.30 Aligned_cols=267 Identities=10% Similarity=0.081 Sum_probs=140.0
Q ss_pred CCCCC--CCCE-EEECCCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECC
Q ss_conf 88555--7537-54502244574599990799799-99939995999948977533322220356417971289998329
Q 000410 1123 SGWRP--RGIL-VAHLQEHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1198 (1553)
Q Consensus 1123 ~~W~p--~G~l-v~~l~~H~~~V~~i~~spd~~~l-aSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~ 1198 (1553)
..|+. .|.+ +....+|.+.|..++|+|||++| ++++.|++|++|++........ ......+...+..++|+|+
T Consensus 17 ~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~---~~~~~~~~~~p~~l~~spD 93 (333)
T d1ri6a_ 17 HVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT---FAAESALPGSLTHISTDHQ 93 (333)
T ss_dssp EEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE---EEEEEECSSCCSEEEECTT
T ss_pred EEEEECCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCCEE---EEEECCCCCCCEEEEECCC
T ss_conf 9999839997699999757998868999589799999977899699999968987079---8530136998549999599
Q ss_pred CCEEEEEE-CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEE-CCCEEEEEECC
Q ss_conf 86999980-79939999933125688864334564342100269984899998127998503999995-89639999699
Q 000410 1199 SAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYST-QNCGIHLWDTR 1276 (1553)
Q Consensus 1199 ~~~lvs~s-~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s-~dg~I~iwDlr 1276 (1553)
++.+++++ .++++.+|+...... ........+...+..+.++++ ++.++.+. .+..|.+|+..
T Consensus 94 g~~l~v~~~~~~~v~~~~~~~~~~------------~~~~~~~~~~~~~~~v~~s~d---~~~~~~~~~~~~~i~~~~~~ 158 (333)
T d1ri6a_ 94 GQFVFVGSYNAGNVSVTRLEDGLP------------VGVVDVVEGLDGCHSANISPD---NRTLWVPALKQDRICLFTVS 158 (333)
T ss_dssp SSEEEEEETTTTEEEEEEEETTEE------------EEEEEEECCCTTBCCCEECTT---SSEEEEEEGGGTEEEEEEEC
T ss_pred CCEEEECCCCCCCEEEECCCCCCC------------EECCCCCCCCCCCEEEEEEEC---CEEEECCCCCCCEEEEEEEC
T ss_conf 988742056888302200111000------------000100377853149886301---01310256554205689732
Q ss_pred CCCCCCEEC----CCCCCCCEEEEEECCCCCEEEE-EECCCCEEEEECCCCCCCCEEECC-C--------CCCCCEEEEE
Q ss_conf 896443000----5888766389999699989999-927993999968889643526503-5--------6883148964
Q 000410 1277 SNSNTWTLK----AIPEEGYVSSLVTGPCGNWFVS-GSSRGVLTLWDLRFLVPVNSWQYS-Q--------VCPIEKMCLF 1342 (1553)
Q Consensus 1277 t~~~~~~l~----~~~h~g~Itsi~~sp~g~~Lvs-Gs~dG~I~iWDlr~~~~i~s~~~~-~--------~~~I~~l~~~ 1342 (1553)
......... .......+..++|++++.++.. +...+...+|+............. . ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 235 (333)
T d1ri6a_ 159 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI--- 235 (333)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE---
T ss_pred CCCCCEEEECEEEEEECCCCCCEEEEECCCEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEE---
T ss_conf 68741001000133403887527999602014786204667217885103555202100223430687765531268---
Q ss_pred CCCCCCCCCCCCCCEEEEE-ECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5999975446899889999-769939999958881899986146899876677763235899889998632224453222
Q 000410 1343 VPPPNAAVSTTARPLIYVA-AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYR 1421 (1553)
Q Consensus 1343 ~p~~~~~~~s~~~~~i~s~-s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 1421 (1553)
.++.++.+++++ ..++.+.+|++....+.........
T Consensus 236 -------~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 273 (333)
T d1ri6a_ 236 -------HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP----------------------------------- 273 (333)
T ss_dssp -------EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE-----------------------------------
T ss_pred -------EEECCCCCEEEECCCCCEEEEEEECCCCCEEEEEEEEC-----------------------------------
T ss_conf -------99515672055045688278788739997899999967-----------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCE-EE-ECCCCCEEEEEECC
Q ss_conf 233389998866817823389990-89-81699819998399
Q 000410 1422 VDELNEPPPRLLGIRSLLPLPGGD-LL-TGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1422 ~~~l~~~~~~~~~V~sl~~sp~g~-Ll-Tgg~Dg~IrlWDl~ 1461 (1553)
....+++++|+|+|. ++ +++.++.|++|++.
T Consensus 274 ---------~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id 306 (333)
T d1ri6a_ 274 ---------TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 306 (333)
T ss_dssp ---------CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ---------CCCCEEEEEEECCCCEEEEEECCCCEEEEEEEE
T ss_conf ---------899762899907989999998899939999997
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.67 E-value=8.3e-13 Score=102.39 Aligned_cols=305 Identities=9% Similarity=-0.026 Sum_probs=174.2
Q ss_pred CCCCCCEEEEEECCCCCEEEEE-----ECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEE----
Q ss_conf 2244574599990799799999-----3999599994897753332222035641797128999832986999980----
Q 000410 1136 QEHCSAVNEIAISHDHSFFVSA-----SDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA---- 1206 (1553)
Q Consensus 1136 ~~H~~~V~~i~~spd~~~laSg-----S~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s---- 1206 (1553)
..|.+++..++++||++.++.. +.++.|.+||..+++ ...+...+. ...+.|+|+|+.+++++
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~------~~~~~~~~~--~~~~a~SpDG~~l~va~~~~~ 88 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGS------ILGHVNGGF--LPNPVAAHSGSEFALASTSFS 88 (373)
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCC------EEEEEECCC--CCCEEECCCCCEEEEEEECCC
T ss_conf 567898656301899978999734225787659999899997------999995798--860798689998999960577
Q ss_pred ------CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCC------EEEEEEECCCCCCCEEEEE--EECCCEEEE
Q ss_conf ------79939999933125688864334564342100269984------8999981279985039999--958963999
Q 000410 1207 ------CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGA------IVTLVNYNTDNCASHMFMY--STQNCGIHL 1272 (1553)
Q Consensus 1207 ------~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~v~~i~~~~~~~s~~~L~~--~s~dg~I~i 1272 (1553)
.++.|.+||..+... .......... ....+.|+++ +..++. ...++.+.+
T Consensus 89 ~~~~~~~~~~v~v~D~~t~~~-------------~~~~~~~~~~~~~~~~~~~~~~~s~d---g~~~~v~~~~~~~~~~~ 152 (373)
T d2madh_ 89 RIAKGKRTDYVEVFDPVTFLP-------------IADIELPDAPRFDVGPYSWMNANTPN---NADLLFFQFAAGPAVGL 152 (373)
T ss_pred CCCCCCCCEEEEEEECCCCCE-------------EEEEECCCCCEEEECCCCCCEEEEEC---CCCEEEEEECCCCCEEE
T ss_conf 532124531899997778938-------------88972688513685168970899858---99379999869874677
Q ss_pred EECCCCCCCCEECCCCCCCCEEEEEECCCCCE-EEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCC
Q ss_conf 96998964430005888766389999699989-99992799399996888964352650356883148964599997544
Q 000410 1273 WDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVS 1351 (1553)
Q Consensus 1273 wDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~-LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~ 1351 (1553)
|+....+.... ...+.++.++|++.. +++++.||.+.+||................ ... .+.......
T Consensus 153 ~~~~~~~~~~~------~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~ 221 (373)
T d2madh_ 153 VVQGGSSDDQL------LSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLT-AAQ----NLLTQPAQA 221 (373)
T ss_pred EECCCCEEEEE------ECCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEEEEEEEEECCC-CCC----CCEEEEEEE
T ss_conf 62368728998------2452069996289919999947993999974774266788630036-675----304345887
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 68998899997699399999588818999861468998766777632358998899986322244532222333899988
Q 000410 1352 TTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPR 1431 (1553)
Q Consensus 1352 s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1431 (1553)
..++ .++..+.++.+.+|+...+............... ....+. |.. ...... ..
T Consensus 222 ~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~-----------------~~~~~~--~~ 276 (373)
T d2madh_ 222 NKSG-RIVWPVYSGKILQADISAAGATNKAPIDALSGGR--KADTWR---PGG-----------------WQQVAY--LK 276 (373)
T ss_pred CCCC-EEEEECCCCEEEEEECCCCEEEEEEEECCCCCCE--EEEEEC---CCC-----------------CEEEEE--EC
T ss_conf 8994-2999258965999976899078977630564757--866413---674-----------------133577--14
Q ss_pred CCCCEEECCCCCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHH
Q ss_conf 66817823389990898169981999839999996497189988988984078860587099993205886402347888
Q 000410 1432 LLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAV 1511 (1553)
Q Consensus 1432 ~~~V~sl~~sp~g~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 1511 (1553)
..........+...+++...++.+.+||+.+++....+.
T Consensus 277 d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~----------------------------------------- 315 (373)
T d2madh_ 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS----------------------------------------- 315 (373)
T ss_pred CCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEC-----------------------------------------
T ss_conf 997599954888247862589869999899996989866-----------------------------------------
Q ss_pred HHHHHCCCCCCCCCCEEEEEEEECCCC--EEEEECCCCEEEECC
Q ss_conf 865201766887530458752206981--999980895289829
Q 000410 1512 LAAAATDSAGCHRDSILSLGSVKLNQR--LLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1512 ~~~~~~~~~~~H~d~I~~ia~~~~~~~--~LvSas~DG~IkVWk 1553 (1553)
+...+.++ .|+++++ ++++++.||.|+||+
T Consensus 316 -----------~~~~~~~~-a~spDG~~~l~vt~~~d~~v~v~D 347 (373)
T d2madh_ 316 -----------LGHDVDAI-SVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred -----------CCCCEEEE-EECCCCCEEEEEEECCCCEEEEEE
T ss_conf -----------89982589-999899989999967999299999
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=7.6e-17 Score=131.06 Aligned_cols=289 Identities=20% Similarity=0.259 Sum_probs=172.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78012999999999970369920013422311210244887036789999999762446101899887663232334679
Q 000410 511 KLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSM 590 (1553)
Q Consensus 511 ~~~~sk~~~l~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~l~~ 590 (1553)
..+.-|..|+..+..+++.+..+..-+.++|.+..+++|+...||..|+.++.++...+.. .-+.++|+|.+..
T Consensus 176 ~~~~VR~~a~~~l~~~~~~~~~~~~~~~l~~~l~~l~~d~~~~vr~~a~~~l~~i~~~~~~------~~~~~~i~~~l~~ 249 (588)
T d1b3ua_ 176 DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQ------EDLEALVMPTLRQ 249 (588)
T ss_dssp SCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCH------HHHHHHTHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCH------HHHHHHHHHHHHH
T ss_conf 9989999999999989987157877999999999974488524678999888776305888------9999999999997
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCCCCCCCCCCCCCCCCCCCHH--------HHCCCHHHHH
Q ss_conf 99999822568788418999999999999999---742013444468999999999842012--------1114608999
Q 000410 591 LPDDPEESVRICYASNIAKLALTAYGFLVHSI---RLSEAGVLDKLSAPHKSPSSSNETSVQ--------LQRLNADVQL 659 (1553)
Q Consensus 591 l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l 659 (1553)
+..|++..||.+.|++|+.|+.....-..... .+.. .+... +.+.... ......+...
T Consensus 250 ~~~D~~~~Vr~~~~~~l~~l~~~~~~~~~~~~l~~~l~~--ll~d~---------~~~vr~~a~~~l~~~~~~l~~~~~~ 318 (588)
T d1b3ua_ 250 AAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQN--LMKDC---------EAEVRAAASHKVKEFCENLSADCRE 318 (588)
T ss_dssp HHTCSSHHHHHHHHHTHHHHHHHHCHHHHHHTHHHHHHH--HHTCS---------SHHHHHHHHHHHHHHHHTSCTTTHH
T ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCC---------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 202356888899998578888776653434441689999--87213---------3577799998799999987665543
Q ss_pred HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECC
Q ss_conf 99999999999998229999969999998333000001386565532122222135698755899997102413453043
Q 000410 660 SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGE 739 (1553)
Q Consensus 660 ~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~ 739 (1553)
......+...+..++. |.+..||.++...+..++..+|++.+.+.++|.++.+|+|.|+.+|.+.+.++..++..+|.
T Consensus 319 ~~~~~~i~~~l~~~~~--d~~~~vr~~~~~~l~~~~~~~~~~~~~~~l~p~l~~~l~d~~~~v~~~~~~~l~~~~~~~~~ 396 (588)
T d1b3ua_ 319 NVIMSQILPCIKELVS--DANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGI 396 (588)
T ss_dssp HHHHHTHHHHHHHHHT--CSCHHHHHHHHTTGGGGHHHHCHHHHHHHTHHHHHHHHTCSCHHHHHHHHTTCHHHHHHSCH
T ss_pred HHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 3219999888887613--88767899999988655430131678888888899998751022226778888888750031
Q ss_pred CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH-HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 114574888887632798248899999999999981988457899-9998531123478599999999999999603894
Q 000410 740 RSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILL-EMIERAFPLLCYPSQWVRRSVVTFIAASSESLGA 818 (1553)
Q Consensus 740 ~s~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~gl~~k~~~~-~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l~~ 818 (1553)
..+.+.++|.+.+.+.|....|...+++++..+++. +....+. .+......++..++..||++|+..+..+++.+++
T Consensus 397 ~~~~~~ll~~l~~~~~d~~~~~r~~~~~~l~~l~~~--~~~~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~~~~ 474 (588)
T d1b3ua_ 397 RQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQ--LGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGK 474 (588)
T ss_dssp HHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHH--HCGGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 344367789999998433588999999999999977--184767788888877635687416899999999999998393
Q ss_pred CC
Q ss_conf 43
Q 000410 819 VD 820 (1553)
Q Consensus 819 ad 820 (1553)
..
T Consensus 475 ~~ 476 (588)
T d1b3ua_ 475 EW 476 (588)
T ss_dssp HH
T ss_pred HH
T ss_conf 87
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.62 E-value=1.1e-12 Score=101.50 Aligned_cols=284 Identities=9% Similarity=0.065 Sum_probs=169.5
Q ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEE-EECCCCEEEEEEEECCCCCCCCCCCC
Q ss_conf 79999939995999948977533322220356417971289998329869999-80799399999331256888643345
Q 000410 1152 SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV-GACDGIIHMFSVDHISRGLGNVEKYS 1230 (1553)
Q Consensus 1152 ~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs-~s~DGsI~iwdi~~~~~~~~~~~~~~ 1230 (1553)
..+++++.|++|++|++...... .......+.+.+.+++|+|+++.|++ +..|+.|++|+++....
T Consensus 5 ~v~v~~~~~~~I~v~~~~~~~~l----~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~--------- 71 (333)
T d1ri6a_ 5 TVYIASPESQQIHVWNLNHEGAL----TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG--------- 71 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE----EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC---------
T ss_pred EEEEECCCCCCEEEEEECCCCCE----EEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCC---------
T ss_conf 99998789993899998399976----99999757998868999589799999977899699999968987---------
Q ss_pred CCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEEC-CCEEEEEECCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEE
Q ss_conf 643421002699848999981279985039999958-9639999699896443000588876638999969998999992
Q 000410 1231 GISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ-NCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGS 1309 (1553)
Q Consensus 1231 ~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~-dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs 1309 (1553)
.. ... .....+.....++|+|+ ++++++++. ++.|.+|+..............+...+.++.++|++++++++.
T Consensus 72 ~~-~~~-~~~~~~~~p~~l~~spD---g~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~ 146 (333)
T d1ri6a_ 72 AL-TFA-AESALPGSLTHISTDHQ---GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPA 146 (333)
T ss_dssp CE-EEE-EEEECSSCCSEEEECTT---SSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEE
T ss_pred CE-EEE-EECCCCCCCEEEEECCC---CCEEEECCCCCCCEEEECCCCCCCEECCCCCCCCCCCEEEEEEECCEEEECCC
T ss_conf 07-985-30136998549999599---98874205688830220011100000010037785314988630101310256
Q ss_pred C-CCCEEEEECCCCCCCCEEECC-----CCCCCCEEEEECCCCCCCCCCCCCCEEEEEE-CCCEEEEEECCCCCE----E
Q ss_conf 7-993999968889643526503-----5688314896459999754468998899997-699399999588818----9
Q 000410 1310 S-RGVLTLWDLRFLVPVNSWQYS-----QVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-GCNEVSLWNAENGSC----H 1378 (1553)
Q Consensus 1310 ~-dG~I~iWDlr~~~~i~s~~~~-----~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s-~dg~I~iWDi~tg~~----~ 1378 (1553)
. +..+.+|+............. .......+.+ . .++..++... ..+...+|+...... .
T Consensus 147 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~-~---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 216 (333)
T d1ri6a_ 147 LKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF-H---------PNEQYAYCVNELNSSVDVWELKDPHGNIECV 216 (333)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE-C---------TTSSEEEEEETTTTEEEEEESSCTTSCCEEE
T ss_pred CCCCEEEEEEECCCCCCEEEECEEEEEECCCCCCEEEE-E---------CCCEEEEEECCCCCCEEEEEECCCCCCEEEE
T ss_conf 55420568973268741001000133403887527999-6---------0201478620466721788510355520210
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-E-EEECCCCCEEE
Q ss_conf 998614689987667776323589988999863222445322223338999886681782338999-0-89816998199
Q 000410 1379 QVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D-LLTGGTDLKIR 1456 (1553)
Q Consensus 1379 ~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~-LlTgg~Dg~Ir 1456 (1553)
....... ...........+++++++ . ++++..++.++
T Consensus 217 ~~~~~~~-----------------------------------------~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~ 255 (333)
T d1ri6a_ 217 QTLDMMP-----------------------------------------ENFSDTRWAADIHITPDGRHLYACDRTASLIT 255 (333)
T ss_dssp EEEECSC-----------------------------------------TTCCSCCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEEEEE-----------------------------------------CCCCCCCCCEEEEEECCCCCEEEECCCCCEEE
T ss_conf 0223430-----------------------------------------68776553126899515672055045688278
Q ss_pred EEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC
Q ss_conf 98399999964971899889889840788605870999932058864023478888652017668875304587522069
Q 000410 1457 RWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLN 1536 (1553)
Q Consensus 1457 lWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ia~~~~~ 1536 (1553)
+|++........+.+.. .+.+.+.++ +|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~p~~~-a~spD 286 (333)
T d1ri6a_ 256 VFSVSEDGSVLSKEGFQ------------------------------------------------PTETQPRGF-NVDHS 286 (333)
T ss_dssp EEEECTTSCCEEEEEEE------------------------------------------------ECSSSCCCE-EECTT
T ss_pred EEEECCCCCEEEEEEEE------------------------------------------------CCCCCEEEE-EEECC
T ss_conf 78873999789999996------------------------------------------------789976289-99079
Q ss_pred CCEEEEE-CCCCEEEECC
Q ss_conf 8199998-0895289829
Q 000410 1537 QRLLISS-SRDGAIKVWK 1553 (1553)
Q Consensus 1537 ~~~LvSa-s~DG~IkVWk 1553 (1553)
|++|+.+ ++++.|.||+
T Consensus 287 Gk~l~va~~~~~~v~v~~ 304 (333)
T d1ri6a_ 287 GKYLIAAGQKSHHISVYE 304 (333)
T ss_dssp SSEEEEECTTTCEEEEEE
T ss_pred CCEEEEEECCCCEEEEEE
T ss_conf 899999988999399999
|
| >d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Constant regulatory domain of protein phosphatase 2a, pr65alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.61 E-value=2.3e-17 Score=134.70 Aligned_cols=299 Identities=16% Similarity=0.165 Sum_probs=199.8
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 25888843102678012999999999970369920013422311210244887036789999999762446101899887
Q 000410 499 IASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAK 578 (1553)
Q Consensus 499 ~~~~i~s~~R~~~~~~sk~~~l~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~ 578 (1553)
++.++...++. ....-|..|++.+..++..++++.....++|.+..++.|.+..||..+.++|.++...+.. .
T Consensus 204 l~~~l~~l~~d-~~~~vr~~a~~~l~~i~~~~~~~~~~~~i~~~l~~~~~D~~~~Vr~~~~~~l~~l~~~~~~------~ 276 (588)
T d1b3ua_ 204 IIPMFSNLASD-EQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGP------E 276 (588)
T ss_dssp HHHHHHHHHTC-SCHHHHTTHHHHHHHHHHHSCHHHHHHHTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHCH------H
T ss_pred HHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH------H
T ss_conf 99999997448-8524678999888776305888999999999999720235688889999857888877665------3
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH------HHHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH-
Q ss_conf 663232334679999998225687884189999999------99999-9997420134444689999999998420121-
Q 000410 579 IFPEYILPMLSMLPDDPEESVRICYASNIAKLALTA------YGFLV-HSIRLSEAGVLDKLSAPHKSPSSSNETSVQL- 650 (1553)
Q Consensus 579 iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a------~rfl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 650 (1553)
+..+.++|.+..+..|++..||.+-+.+++.+++.- ..+++ +-..+... +.. .+.......
T Consensus 277 ~~~~~l~~~l~~ll~d~~~~vr~~a~~~l~~~~~~l~~~~~~~~~~~~i~~~l~~~--~~d---------~~~~vr~~~~ 345 (588)
T d1b3ua_ 277 ITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKEL--VSD---------ANQHVKSALA 345 (588)
T ss_dssp HHHHTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHTSCTTTHHHHHHHTHHHHHHHH--HTC---------SCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCC---------CCHHHHHHHH
T ss_conf 43444168999987213357779999879999998766554332199998888876--138---------8767899999
Q ss_pred HCCCHH-H--HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 114608-9--9999999999999998229999969999998333000001386565532122222135698755899997
Q 000410 651 QRLNAD-V--QLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFY 727 (1553)
Q Consensus 651 ~~~~~~-~--~l~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~aff 727 (1553)
..+..- . .-+...+.+...+..++. |.++.||.+.+..+..++.-+|.....+.+++.+...++|++|..|.+.+
T Consensus 346 ~~l~~~~~~~~~~~~~~~l~p~l~~~l~--d~~~~v~~~~~~~l~~~~~~~~~~~~~~~ll~~l~~~~~d~~~~~r~~~~ 423 (588)
T d1b3ua_ 346 SVIMGLSPILGKDNTIEHLLPLFLAQLK--DECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAII 423 (588)
T ss_dssp TTGGGGHHHHCHHHHHHHTHHHHHHHHT--CSCHHHHHHHHTTCHHHHHHSCHHHHHHHHHHHHHHHHTCSSHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 9886554301316788888888999987--51022226778888888750031344367789999998433588999999
Q ss_pred HCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH-HHHHHHHHHCCCCCCCCHHHHHHHH
Q ss_conf 102413453043114574888887632798248899999999999981988457-8999998531123478599999999
Q 000410 728 GQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKR-ILLEMIERAFPLLCYPSQWVRRSVV 806 (1553)
Q Consensus 728 ~~i~~v~~~vG~~s~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~gl~~k~-~~~~~~~~~~~ll~HPn~wIR~~~~ 806 (1553)
+.+..++...|...+.+++.|++...|.|+..-|-..|+++|..|++. +.+. ..-.++.....++-+||.++|++++
T Consensus 424 ~~l~~l~~~~~~~~~~~~l~~~l~~~l~D~~~~VR~~A~~~L~~l~~~--~~~~~~~~~i~~~l~~~~~~~~~~~R~~~~ 501 (588)
T d1b3ua_ 424 EYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEK--FGKEWAHATIIPKVLAMSGDPNYLHRMTTL 501 (588)
T ss_dssp HHHHHHHHHHCGGGCCHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH--HCHHHHHHHTHHHHHHTTTCSCHHHHHHHH
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH--HCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_conf 999999977184767788888877635687416899999999999998--393878999999999986599878999999
Q ss_pred HHHHHHHHCCCCC
Q ss_conf 9999996038944
Q 000410 807 TFIAASSESLGAV 819 (1553)
Q Consensus 807 ~~i~~~~~~l~~a 819 (1553)
..+..+...++.-
T Consensus 502 ~~l~~l~~~~~~~ 514 (588)
T d1b3ua_ 502 FCINVLSEVCGQD 514 (588)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCHH
T ss_conf 9999999986968
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.60 E-value=1.1e-12 Score=101.47 Aligned_cols=276 Identities=12% Similarity=0.035 Sum_probs=157.2
Q ss_pred CCCC-CCCEEEECCCCCCCEEEEEECCCCCEEEEE----------ECCCCEEEEECCCCCCCCCCCC-CEEEECCCCCEE
Q ss_conf 8555-753754502244574599990799799999----------3999599994897753332222-035641797128
Q 000410 1124 GWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSA----------SDDSTVKVWDSRKLEKDISFRS-RLTYHLEGSRAL 1191 (1553)
Q Consensus 1124 ~W~p-~G~lv~~l~~H~~~V~~i~~spd~~~laSg----------S~DGtVkIWD~~~~~~~~~~~~-~~t~~~h~~~I~ 1191 (1553)
.|+. .|++++++..+..+ .++||||+++++.+ +.||.|++||..+++....... ............
T Consensus 32 v~D~~tg~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~ 109 (355)
T d2bbkh_ 32 VIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW 109 (355)
T ss_dssp EEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG
T ss_pred EEECCCCCEEEEEECCCCC--CEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCC
T ss_conf 9999999499999899998--56994899999999677764201589998999999999798898058864031179873
Q ss_pred EEEEECCCCEEEEEE--CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCE
Q ss_conf 999832986999980--799399999331256888643345643421002699848999981279985039999958963
Q 000410 1192 CTMMLRHSAQVVVGA--CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCG 1269 (1553)
Q Consensus 1192 ~i~f~~~~~~lvs~s--~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~ 1269 (1553)
.+.|+++++.+++++ .+..+.+|+..+.. ........ .. ....... ....+..+.|+.
T Consensus 110 ~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-~~-~~~~~~~-----~~~~~~~~~dg~ 169 (355)
T d2bbkh_ 110 MTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA-------------FKRMLDVP-DC-YHIFPTA-----PDTFFMHCRDGS 169 (355)
T ss_dssp GEEECTTSSEEEEEECSSSCEEEEEETTTTE-------------EEEEEECC-SE-EEEEEEE-----TTEEEEEETTSC
T ss_pred EEEEECCCCEEEEECCCCCCEEEEEECCCCC-------------EEEEEECC-CC-CEEEECC-----CCCEEEECCCCC
T ss_conf 4999338871577327988204543057883-------------76677058-74-0473069-----963699938999
Q ss_pred EEEEECCCCCCCCEEC----CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCC--CEEECCCCCCCCEEEEEC
Q ss_conf 9999699896443000----5888766389999699989999927993999968889643--526503568831489645
Q 000410 1270 IHLWDTRSNSNTWTLK----AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPV--NSWQYSQVCPIEKMCLFV 1343 (1553)
Q Consensus 1270 I~iwDlrt~~~~~~l~----~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i--~s~~~~~~~~I~~l~~~~ 1343 (1553)
...++........... ...+...+.+..+.+++..++.++.+|.+.+||+...... ..... +........+ .
T Consensus 170 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~-~ 247 (355)
T d2bbkh_ 170 LAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEA-LTEAERADGW-R 247 (355)
T ss_dssp EEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEES-SCHHHHHTTE-E
T ss_pred EEEEEECCCCEEEEEECCCCCCEECCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCC-CCCCEEEEEE-E
T ss_conf 8999834787379996243330001106102153899738874699829999658990799844578-4412685433-0
Q ss_pred CC-CCCCCCCCCCCEEEEEECC----------CEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99-9975446899889999769----------939999958881899986146899876677763235899889998632
Q 000410 1344 PP-PNAAVSTTARPLIYVAAGC----------NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDL 1412 (1553)
Q Consensus 1344 p~-~~~~~~s~~~~~i~s~s~d----------g~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 1412 (1553)
|. ...+.++.++..+++...+ +.|.+||..+++....+....
T Consensus 248 p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~--------------------------- 300 (355)
T d2bbkh_ 248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--------------------------- 300 (355)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE---------------------------
T ss_pred CCCEEEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECCCC---------------------------
T ss_conf 35108999807997678874068712651799759998678884989966899---------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCE--E-EECCCCCEEEEEECCCCCCCEEEEC
Q ss_conf 224453222233389998866817823389990--8-9816998199983999999649718
Q 000410 1413 RRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGD--L-LTGGTDLKIRRWDHCSPGRSYCICG 1471 (1553)
Q Consensus 1413 ~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~--L-lTgg~Dg~IrlWDl~~~~~s~~i~g 1471 (1553)
.+++++|+|+|. + ++++.|+.|++||+++++....+.+
T Consensus 301 ---------------------~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~~ 341 (355)
T d2bbkh_ 301 ---------------------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341 (355)
T ss_dssp ---------------------EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred ---------------------CEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEEC
T ss_conf ---------------------87799992899969999978999899999999989999928
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.50 E-value=1.2e-11 Score=94.09 Aligned_cols=199 Identities=9% Similarity=0.003 Sum_probs=89.7
Q ss_pred EEEEEECCCCCEEEEE-----ECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEE----------
Q ss_conf 4599990799799999-----3999599994897753332222035641797128999832986999980----------
Q 000410 1142 VNEIAISHDHSFFVSA-----SDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA---------- 1206 (1553)
Q Consensus 1142 V~~i~~spd~~~laSg-----S~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s---------- 1206 (1553)
+.-.+.+||++.++.. +.+++|.+||..+++ ...+...+ ....++|+|+++.+++++
T Consensus 4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~------~~~~~~~g--~~~~~a~SpDg~~l~v~~~~~~~~~~g~ 75 (355)
T d2bbkh_ 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGR------VIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGE 75 (355)
T ss_dssp CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTE------EEEEEEEC--SSCEEEECTTSSCEEEEEEEEEETTEEE
T ss_pred CEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCC------EEEEEECC--CCCCEEECCCCCEEEEEECCCCCCCCCC
T ss_conf 174765899999999826647776719999999994------99999899--9985699489999999967776420158
Q ss_pred CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECC---CCCCCEEEEEEECCCCCCCEEEEEE--ECCCEEEEEECCCCCCC
Q ss_conf 799399999331256888643345643421002---6998489999812799850399999--58963999969989644
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD---TKEGAIVTLVNYNTDNCASHMFMYS--TQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1207 ~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~i~~~~~~~s~~~L~~~--s~dg~I~iwDlrt~~~~ 1281 (1553)
.||.|.+||..+.. .. ..+.... ...+.....+.|+++ +..++.+ +.+..+.+||..+++..
T Consensus 76 ~d~~v~v~D~~t~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~s~d---g~~~~v~~~~~~~~~~~~~~~~~~~~ 142 (355)
T d2bbkh_ 76 RTDYVEVFDPVTLL-----PT-----ADIELPDAPRFLVGTYPWMTSLTPD---GKTLLFYQFSPAPAVGVVDLEGKAFK 142 (355)
T ss_dssp EEEEEEEECTTTCC-----EE-----EEEEETTCCCCCBSCCGGGEEECTT---SSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCCEEEEEECCCCC-----EE-----EEEECCCCCEEECCCCCCEEEEECC---CCEEEEECCCCCCEEEEEECCCCCEE
T ss_conf 99989999999997-----98-----8980588640311798734999338---87157732798820454305788376
Q ss_pred CEECCCCC-----CCCEEEEEECCCCCEEEEE-ECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 30005888-----7663899996999899999-27993999968889643526503568831489645999975446899
Q 000410 1282 WTLKAIPE-----EGYVSSLVTGPCGNWFVSG-SSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTAR 1355 (1553)
Q Consensus 1282 ~~l~~~~h-----~g~Itsi~~sp~g~~LvsG-s~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~ 1355 (1553)
..+..+.. .+....+.+++++..+... ..++.+.+++....... +...+....+ ...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~----------~~~~ 206 (355)
T d2bbkh_ 143 RMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPE------DEFLINHPAY----------SQKA 206 (355)
T ss_dssp EEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCT------TSCBCSCCEE----------ETTT
T ss_pred EEEECCCCCEEEECCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCE------ECCEEEECCC----------CCCC
T ss_conf 67705874047306996369993899989998347873799962433300------0110610215----------3899
Q ss_pred CEEEEEECCCEEEEEECCCCCE
Q ss_conf 8899997699399999588818
Q 000410 1356 PLIYVAAGCNEVSLWNAENGSC 1377 (1553)
Q Consensus 1356 ~~i~s~s~dg~I~iWDi~tg~~ 1377 (1553)
..++.++.++.+.+|++..+..
T Consensus 207 ~~~~~~~~~~~~~v~~~~~~~~ 228 (355)
T d2bbkh_ 207 GRLVWPTYTGKIHQIDLSSGDA 228 (355)
T ss_dssp TEEEEEBTTSEEEEEECTTSSC
T ss_pred CEEEEECCCCEEEEEECCCCCE
T ss_conf 7388746998299996589907
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.35 E-value=2.7e-11 Score=91.64 Aligned_cols=271 Identities=10% Similarity=-0.032 Sum_probs=152.4
Q ss_pred CCCCEEEECCCCCCCEEEEEECCCCCEEEEEE----------CCCCEEEEECCCCCCCCCCCC-CEEEECCCCCEEEEEE
Q ss_conf 57537545022445745999907997999993----------999599994897753332222-0356417971289998
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSAS----------DDSTVKVWDSRKLEKDISFRS-RLTYHLEGSRALCTMM 1195 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS----------~DGtVkIWD~~~~~~~~~~~~-~~t~~~h~~~I~~i~f 1195 (1553)
-.|+++.++.++..+ .++|+||+++++.++ .|++|++||..+++....... .......+.....++|
T Consensus 54 ~~~~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~ 131 (368)
T d1mdah_ 54 GCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN 131 (368)
T ss_dssp TTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE
T ss_pred CCCCEEEEEECCCCC--CCEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEE
T ss_conf 998377888578777--513989998899975567640103567869999899993830643785421024688640588
Q ss_pred ECCCCEEEEEE-CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEE
Q ss_conf 32986999980-79939999933125688864334564342100269984899998127998503999995896399996
Q 000410 1196 LRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWD 1274 (1553)
Q Consensus 1196 ~~~~~~lvs~s-~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwD 1274 (1553)
+|+++.++++. .++.+.+||+.+.. ............ ..+.+ ...++..+.||.+..|+
T Consensus 132 SpDGk~l~va~~~~~~v~~~d~~~~~-------------~~~~~~~~~~~~-----~~~~~--~~~~v~~~~Dg~~~~~~ 191 (368)
T d1mdah_ 132 CASSACLLFFLFGSSAAAGLSVPGAS-------------DDQLTKSASCFH-----IHPGA--AATHYLGSCPASLAASD 191 (368)
T ss_dssp CTTSSCEEEEECSSSCEEEEEETTTE-------------EEEEEECSSCCC-----CEEEE--TTEEECCCCTTSCEEEE
T ss_pred CCCCCEEEEEECCCCEEEEEECCCCC-------------EEEEEECCCCCE-----ECCCC--CCEEEEECCCCCEEEEE
T ss_conf 78998999996899859999899893-------------867860467523-----74699--82399994899889998
Q ss_pred CCCCCCCCEEC----CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCC-CEEEEECCC-CCC
Q ss_conf 99896443000----588876638999969998999992799399996888964352650356883-148964599-997
Q 000410 1275 TRSNSNTWTLK----AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPI-EKMCLFVPP-PNA 1348 (1553)
Q Consensus 1275 lrt~~~~~~l~----~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I-~~l~~~~p~-~~~ 1348 (1553)
+.......... ...+...+....+++++..+.+. .|.+.++|.................. ....+ .|. ...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 268 (368)
T d1mdah_ 192 LAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDGNESGRKADNF-RSAGFQM 268 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCSSCTHHHHTTE-EECSSSC
T ss_pred ECCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEC--CCCEEEEEECCCCEEEEEECCCCCCEEEEEEE-CCCCCEE
T ss_conf 26896266653031113566646601015586899934--89779996069936997602465430455401-2788356
Q ss_pred CCCCCCCCEEEEEECC---------CEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 5446899889999769---------9399999588818999861468998766777632358998899986322244532
Q 000410 1349 AVSTTARPLIYVAAGC---------NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQK 1419 (1553)
Q Consensus 1349 ~~~s~~~~~i~s~s~d---------g~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1419 (1553)
.+.+.++..+++...+ ..+.+||..++++...+...
T Consensus 269 ~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~----------------------------------- 313 (368)
T d1mdah_ 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG----------------------------------- 313 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-----------------------------------
T ss_pred EEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECCC-----------------------------------
T ss_conf 887179987999835897334058864999989999486895589-----------------------------------
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCE--E-EECCCCCEEEEEECCCCCCCEEEE
Q ss_conf 22233389998866817823389990--8-981699819998399999964971
Q 000410 1420 YRVDELNEPPPRLLGIRSLLPLPGGD--L-LTGGTDLKIRRWDHCSPGRSYCIC 1470 (1553)
Q Consensus 1420 ~~~~~l~~~~~~~~~V~sl~~sp~g~--L-lTgg~Dg~IrlWDl~~~~~s~~i~ 1470 (1553)
..+.+++|+|+|. + ++++.|+.|++||..+++....+.
T Consensus 314 -------------~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~~~~i~ 354 (368)
T d1mdah_ 314 -------------HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp -------------EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred -------------CCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEE
T ss_conf -------------96517999989998999994899969999899997999987
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.25 E-value=1.2e-10 Score=86.95 Aligned_cols=59 Identities=5% Similarity=-0.034 Sum_probs=35.8
Q ss_pred CCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCCCCCCEEE-ECCCCCEEEEEEECCCCE
Q ss_conf 244574599990799799-99939995999948977533322220356-417971289998329869
Q 000410 1137 EHCSAVNEIAISHDHSFF-VSASDDSTVKVWDSRKLEKDISFRSRLTY-HLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1137 ~H~~~V~~i~~spd~~~l-aSgS~DGtVkIWD~~~~~~~~~~~~~~t~-~~h~~~I~~i~f~~~~~~ 1201 (1553)
.|........++|||+++ ++...++.|.+||+.+++. .... ...+..+..+.|.++++.
T Consensus 69 ~hhP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~------~~ii~iP~g~gphgi~~spdg~t 129 (441)
T d1qnia2 69 CHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKT------DKITHIPNVQAIHGLRLQKVPKT 129 (441)
T ss_dssp BCCCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEE------EEEEECTTCCCEEEEEECCSSBC
T ss_pred CCCCCCCEECCCCCCCEEEEECCCCCEEEEEECCCCCE------EEEEECCCCCCCCCEEEECCCCE
T ss_conf 56777221032688888999738999799998877847------55795678878643487056998
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.18 E-value=1.8e-08 Score=71.62 Aligned_cols=20 Identities=15% Similarity=0.077 Sum_probs=14.0
Q ss_pred CCCCCCEEEEEEEECCCCEEE
Q ss_conf 887530458752206981999
Q 000410 1521 GCHRDSILSLGSVKLNQRLLI 1541 (1553)
Q Consensus 1521 ~~H~d~I~~ia~~~~~~~~Lv 1541 (1553)
..|...+.++ .|+++|++++
T Consensus 412 ~~~~~~~~s~-~fSpdgky~~ 431 (470)
T d2bgra1 412 NPERCQYYSV-SFSKEAKYYQ 431 (470)
T ss_dssp STTTBCBEEE-EECTTSSEEE
T ss_pred CCCCCCEEEE-EECCCCCEEE
T ss_conf 5888987999-9998999999
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.08 E-value=1.4e-07 Score=65.17 Aligned_cols=93 Identities=5% Similarity=-0.099 Sum_probs=51.8
Q ss_pred CCCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCC---CCCEEEEC---------CCCCEE
Q ss_conf 855575375450224457459999079979999939995999948977533322---22035641---------797128
Q 000410 1124 GWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISF---RSRLTYHL---------EGSRAL 1191 (1553)
Q Consensus 1124 ~W~p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~---~~~~t~~~---------h~~~I~ 1191 (1553)
.|+..+.-+..+..|.+.+....|||||+.+|..+ |+.+.+|+...++..... .....+.+ ..+...
T Consensus 96 l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~ 174 (470)
T d2bgra1 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYS 174 (470)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSB
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE-CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCC
T ss_conf 99898885131246874231010146764135751-46413798899946532101477740535432011210047765
Q ss_pred EEEEECCCCEEEEEECCCC-EEEEEEE
Q ss_conf 9998329869999807993-9999933
Q 000410 1192 CTMMLRHSAQVVVGACDGI-IHMFSVD 1217 (1553)
Q Consensus 1192 ~i~f~~~~~~lvs~s~DGs-I~iwdi~ 1217 (1553)
.+.|+|+|+.++....|.+ +..|.+.
T Consensus 175 ~~~wSPDGk~ia~~~~d~~~v~~~~~~ 201 (470)
T d2bgra1 175 ALWWSPNGTFLAYAQFNDTEVPLIEYS 201 (470)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEE
T ss_pred CCEECCCCCCCCEEEECCCCCCEEEEE
T ss_conf 307999987220268637767069987
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.02 E-value=1.3e-08 Score=72.50 Aligned_cols=228 Identities=7% Similarity=-0.041 Sum_probs=119.5
Q ss_pred CCCCC-CCEEEECCCCCC-------CEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 85557-537545022445-------745999907997999993-999599994897753332222035641797128999
Q 000410 1124 GWRPR-GILVAHLQEHCS-------AVNEIAISHDHSFFVSAS-DDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTM 1194 (1553)
Q Consensus 1124 ~W~p~-G~lv~~l~~H~~-------~V~~i~~spd~~~laSgS-~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~ 1194 (1553)
.|++. ++.++.+..|.. ....++|+||+++++.++ .++++.+||+.+++. ......+.....
T Consensus 100 v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~------~~~~~~~~~~~~--- 170 (368)
T d1mdah_ 100 VFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD------DQLTKSASCFHI--- 170 (368)
T ss_dssp EECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE------EEEEECSSCCCC---
T ss_pred EEECCCCCEEEEECCCCCCEECCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCCCE------EEEEECCCCCEE---
T ss_conf 99899993830643785421024688640588789989999968998599998998938------678604675237---
Q ss_pred EECCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEE
Q ss_conf 83298699998079939999933125688864334564342100269984899998127998503999995896399996
Q 000410 1195 MLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWD 1274 (1553)
Q Consensus 1195 f~~~~~~lvs~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwD 1274 (1553)
+......++..+.||++.+|+........... .......+........+.++ +..+ .+..+.++++|
T Consensus 171 ~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~---g~~~--~~~~~~v~~~~ 237 (368)
T d1mdah_ 171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIV--------GAQCTGAQNCSSQAAQANYP---GMLV--WAVASSILQGD 237 (368)
T ss_dssp EEEETTEEECCCCTTSCEEEECCSSCCCCEEC--------CCCSCTTSCBCSCCEEETTT---TEEE--ECBSSCCEEEE
T ss_pred CCCCCCEEEEECCCCCEEEEEECCCCEEEEEE--------ECCCCCCCCCCEEECCCCCC---CEEE--EECCCCEEEEE
T ss_conf 46998239999489988999826896266653--------03111356664660101558---6899--93489779996
Q ss_pred CCCCCCCC----------EECCCCCCCCEEEEEECCCCCEEEEEECCC---------CEEEEECCCCCCCCEEECCCCCC
Q ss_conf 99896443----------000588876638999969998999992799---------39999688896435265035688
Q 000410 1275 TRSNSNTW----------TLKAIPEEGYVSSLVTGPCGNWFVSGSSRG---------VLTLWDLRFLVPVNSWQYSQVCP 1335 (1553)
Q Consensus 1275 lrt~~~~~----------~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG---------~I~iWDlr~~~~i~s~~~~~~~~ 1335 (1553)
........ ........+....+++++++..+++...++ .+.+||..++..+..+... ..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~--~~ 315 (368)
T d1mdah_ 238 IPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG--HD 315 (368)
T ss_dssp CCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE--EE
T ss_pred ECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECCC--CC
T ss_conf 0699369976024654304554012788356887179987999835897334058864999989999486895589--96
Q ss_pred CCEEEEECCCCCCCCCCCCCCE-EEEEECCCEEEEEECCCCCEEEEEECC
Q ss_conf 3148964599997544689988-999976993999995888189998614
Q 000410 1336 IEKMCLFVPPPNAAVSTTARPL-IYVAAGCNEVSLWNAENGSCHQVLRTA 1384 (1553)
Q Consensus 1336 I~~l~~~~p~~~~~~~s~~~~~-i~s~s~dg~I~iWDi~tg~~~~~l~~~ 1384 (1553)
+..+.+ +|++. .. ++++.+++.|.+||..+++....+...
T Consensus 316 ~~~~a~-spDG~--------~~ly~s~~~~~~v~v~D~~tgk~~~~i~~g 356 (368)
T d1mdah_ 316 SDAIIA-AQDGA--------SDNYANSAGTEVLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp ECEEEE-CCSSS--------CEEEEEETTTTEEEEEESSSCEEEEECCCC
T ss_pred EEEEEE-CCCCC--------EEEEEEECCCCEEEEEECCCCCEEEEEECC
T ss_conf 517999-98999--------899999489996999989999799998799
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.85 E-value=6.2e-08 Score=67.81 Aligned_cols=295 Identities=15% Similarity=0.152 Sum_probs=169.0
Q ss_pred HHHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCCC---CCCCCCCCEEEECCCC--CCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 8888431026-78012999999999970369920---0134223112102448--8703678999999976244610189
Q 000410 501 SLLCSCVRNV-KLPHYRRAAILLLKSSSLFIDDE---DRLQRVLPHVIAMLSD--PAAIVRCAALETLCDILPLVRNFPP 574 (1553)
Q Consensus 501 ~~i~s~~R~~-~~~~sk~~~l~ll~~~s~~~~de---~~ldrilPy~~~ll~d--~~~~Vr~~al~~l~~~l~~v~~~~~ 574 (1553)
..++..+.+- .....+..++..+-.+.+....+ ..++.++++++..+.+ .+..||..|++++..++.......
T Consensus 130 ~~l~~~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~- 208 (458)
T d1ibrb_ 130 PQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANF- 208 (458)
T ss_dssp HHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHH-
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 7899998820321778888998888987631410002338899999999861545679999999999999988613245-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCHHHHC
Q ss_conf 9887663232334679999998225687884189999999999999997420--13444468999999999842012111
Q 000410 575 SDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSE--AGVLDKLSAPHKSPSSSNETSVQLQR 652 (1553)
Q Consensus 575 ~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (1553)
+...+...+++.+..+..+++.-||.....||..+++....++.- .+.. ...+.... ... .....
T Consensus 209 -~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~--~l~~~~~~~~~~~~--------~~~--~~~~~ 275 (458)
T d1ibrb_ 209 -DKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMET--YMGPALFAITIEAM--------KSD--IDEVA 275 (458)
T ss_dssp -TSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTT--TTTTTHHHHHHHHH--------HCS--SHHHH
T ss_pred -HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH--------CCC--CHHHH
T ss_conf -667777776766887725998999999999999999871999998--88778999999984--------354--59999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCC-------CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 4608999999999999999982299-------999699999983330000013865655321222221356987558999
Q 000410 653 LNADVQLSQLRKSIAEVVQELVMGP-------KQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAV 725 (1553)
Q Consensus 653 ~~~~~~l~~l~~~~~~~~~~ll~~~-------d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~a 725 (1553)
...-.-+..+-+............. -......+..++.+.+.. .-.+++.-....|.+|.+|.+
T Consensus 276 ~~a~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l---------~~~~~~~~~~~~~~~~~~~~~ 346 (458)
T d1ibrb_ 276 LQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPIL---------TQTLTKQDENDDDDDWNPCKA 346 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCTTCSSSCSSCCCCCHHHHHHHHHHHHH---------HHHTTCCCSSCCTTCCSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHCCHHHHCCCCCCHHHH
T ss_conf 99999999989988999985036787641899999999998899872667---------764000102101122339999
Q ss_pred HHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 97102413453043114574888887632798248899999999999981--9884578999998531123478599999
Q 000410 726 FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKS--GYLRKRILLEMIERAFPLLCYPSQWVRR 803 (1553)
Q Consensus 726 ff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~--gl~~k~~~~~~~~~~~~ll~HPn~wIR~ 803 (1553)
..+.+..++...|...+ +.++|.+.|.|.|++-.|...++.+|..+++. +-.-+..+-+++..+.+++-|||..||+
T Consensus 347 a~~~l~~l~~~~~~~~~-~~l~~~i~~~l~s~~~~~r~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~ 425 (458)
T d1ibrb_ 347 AGVCLMLLATCCEDDIV-PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRD 425 (458)
T ss_dssp HHHHHHHHHHHTTTTHH-HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHH
T ss_pred HHHHHHHHHHHCCHHHH-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99999999875517556-67899999985699989999999999999975477678988999999999884899899999
Q ss_pred HHHHHHHHHHHCCCCC
Q ss_conf 9999999996038944
Q 000410 804 SVVTFIAASSESLGAV 819 (1553)
Q Consensus 804 ~~~~~i~~~~~~l~~a 819 (1553)
+|+..+..++..++..
T Consensus 426 ~a~~~l~~i~~~~~~~ 441 (458)
T d1ibrb_ 426 TAAWTVGRICELLPEA 441 (458)
T ss_dssp HHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999972010
|
| >d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.80 E-value=4.7e-10 Score=82.87 Aligned_cols=250 Identities=13% Similarity=0.084 Sum_probs=156.8
Q ss_pred HHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHCCCCC----CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 2258888431026-7801299999999997036992----0013422311210244887036789999999762446101
Q 000410 498 LIASLLCSCVRNV-KLPHYRRAAILLLKSSSLFIDD----EDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNF 572 (1553)
Q Consensus 498 i~~~~i~s~~R~~-~~~~sk~~~l~ll~~~s~~~~d----e~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~ 572 (1553)
-++..+...+.+. ....-|..|+..+..+..+..+ +.....+.|.+..++.++++.||..+++++.+++....
T Consensus 171 ~il~~~~~~l~~~~~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~-- 248 (458)
T d1ibrb_ 171 EILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYY-- 248 (458)
T ss_dssp HHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCG--
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH--
T ss_conf 999999998615456799999999999999886132456677777767668877259989999999999999998719--
Q ss_pred CCCCCCCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 8998876632323346799----999982256878841899999999999999974201344446899999999984201
Q 000410 573 PPSDAKIFPEYILPMLSML----PDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSV 648 (1553)
Q Consensus 573 ~~~~~~iF~eYilP~l~~l----~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (1553)
..|.+|+.+.+..+ ..+...-+|....+.+..+++............ .... . . .
T Consensus 249 -----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~~~~~~~~~~~~----~~~~-~----------~--~ 306 (458)
T d1ibrb_ 249 -----QYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEA----AEQG-R----------P--P 306 (458)
T ss_dssp -----GGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHCCT----TCSS-S----------C--S
T ss_pred -----HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHH-H----------H--H
T ss_conf -----999988877899999998435459999999999999899889999850367----8764-1----------8--9
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 21114608999999999999999982299-----9996999999833300000138656553212222213569875589
Q 000410 649 QLQRLNADVQLSQLRKSIAEVVQELVMGP-----KQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLR 723 (1553)
Q Consensus 649 ~~~~~~~~~~l~~l~~~~~~~~~~ll~~~-----d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR 723 (1553)
...... ......+.+.......+.+. |.+..++.+....+..+|..+|.+ .-+.+++.+...|++.||.-|
T Consensus 307 ~~~~~~---~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~l~~~~~~~-~~~~l~~~i~~~l~s~~~~~r 382 (458)
T d1ibrb_ 307 EHTSKF---YAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDD-IVPHVLPFIKEHIKNPDWRYR 382 (458)
T ss_dssp SCCCCC---HHHHHHHHHHHHHHHHTTCCCSSCCTTCCSHHHHHHHHHHHHHHHTTTT-HHHHHHHHHHHHTTCSSHHHH
T ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHCCCCHHHH
T ss_conf 999999---9998899872667764000102101122339999999999998755175-566789999998569998999
Q ss_pred HHHHHCCCEEEEEECCCHHH---HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 99971024134530431145---74888887632798248899999999999981
Q 000410 724 AVFYGQIVYVCFFVGERSVE---EYLLPYIEQALSDATEAVIVNALDCLAILCKS 775 (1553)
Q Consensus 724 ~aff~~i~~v~~~vG~~s~e---~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~ 775 (1553)
-|-+..+..++...+...++ .-++|.+.+.|.|+++.|-..|+.+|..+++.
T Consensus 383 ~aal~~l~~i~~~~~~~~~~~~l~~i~~~l~~~l~d~~~~VR~~a~~~l~~i~~~ 437 (458)
T d1ibrb_ 383 DAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICEL 437 (458)
T ss_dssp HHHHHHHHHTSSSSCTTTTCTTTTTHHHHHHHGGGCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999975477678988999999999884899899999999999999997
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=98.80 E-value=2.2e-08 Score=71.04 Aligned_cols=272 Identities=8% Similarity=-0.031 Sum_probs=136.0
Q ss_pred CCCCC-CCEEEECC-CCCCCEEEEEECCCCC--EEEEEECCCC-----------------EEEEECCCCCCCCCCCCCEE
Q ss_conf 85557-53754502-2445745999907997--9999939995-----------------99994897753332222035
Q 000410 1124 GWRPR-GILVAHLQ-EHCSAVNEIAISHDHS--FFVSASDDST-----------------VKVWDSRKLEKDISFRSRLT 1182 (1553)
Q Consensus 1124 ~W~p~-G~lv~~l~-~H~~~V~~i~~spd~~--~laSgS~DGt-----------------VkIWD~~~~~~~~~~~~~~t 1182 (1553)
.|++. +++...+. .+...+..++|+|+++ |++..+.+.. +..+|..+++ ...+
T Consensus 98 vIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~------v~~q 171 (441)
T d1qnia2 98 RIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMD------VAWQ 171 (441)
T ss_dssp EEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCS------EEEE
T ss_pred EEECCCCCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE------EEEE
T ss_conf 9988778475579567887864348705699899995667754436766300145553238866375560------6478
Q ss_pred EECCCCCEEEEEEECCCCEEEEEECCCC-EEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEE
Q ss_conf 6417971289998329869999807993-999993312568886433456434210026998489999812799850399
Q 000410 1183 YHLEGSRALCTMMLRHSAQVVVGACDGI-IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMF 1261 (1553)
Q Consensus 1183 ~~~h~~~I~~i~f~~~~~~lvs~s~DGs-I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L 1261 (1553)
.... +....+.|.+++..+++++.+.. +..++.. .. .. ...+.... .-..+++.++ ++++
T Consensus 172 I~v~-~~p~~v~~spdGk~a~vt~~nse~~~~id~~--t~---~~-----~d~i~v~n-----~p~~~~~~~d---Gk~~ 232 (441)
T d1qnia2 172 VIVD-GNLDNTDADYTGKYATSTCYNSERAVDLAGT--MR---ND-----RDWVVVFN-----VERIAAAVKA---GNFK 232 (441)
T ss_dssp EEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHH--TC---SS-----BCEEEEEE-----HHHHHHHHHT---TCCB
T ss_pred EECC-CCCCCEEECCCCCEEEEEECCCCCEEEEECC--CC---CE-----EEEEEECC-----CCCEEEEECC---CCEE
T ss_conf 7369-9865469879999899985178731898515--71---21-----78999688-----5110799669---9999
Q ss_pred EEEECCCEEEEEECCCCCCCCEECCCCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEE
Q ss_conf 99958963999969989644300058887663899996999899-99927993999968889643526503568831489
Q 000410 1262 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWF-VSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1340 (1553)
Q Consensus 1262 ~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~L-vsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~ 1340 (1553)
. .+.++.+.+++.........+.. ...+..+.++|||+++ ++|..++++.+||+...... +. ....+...+.
T Consensus 233 ~-v~~~~v~vvd~~~~~~v~~~IPv---gksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~--~~-~~~~~~~~~~ 305 (441)
T d1qnia2 233 T-IGDSKVPVVDGRGESEFTRYIPV---PKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDL--FE-DKIELRDTIV 305 (441)
T ss_dssp C-CTTCCCCEEECSSSCSSEEEECC---BSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHH--TT-TSSCGGGGEE
T ss_pred E-ECCCCCEEEECCCCCCEEEEEEC---CCCCCCCEECCCCCEEEEECCCCCCEEEEEEEHHHHH--HH-CCCCCCEEEE
T ss_conf 9-69998289980368706899717---9886672689998789990775993899983224457--52-5688424799
Q ss_pred EECCCCC----CCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6459999----754468998899997699399999588818999861468998766777632358998899986322244
Q 000410 1341 LFVPPPN----AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNV 1416 (1553)
Q Consensus 1341 ~~~p~~~----~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 1416 (1553)
. .+... ...|+.++....+...|..|..|++..... .+.... ....+
T Consensus 306 ~-~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~--~~~~~~--~~~v~------------------------ 356 (441)
T d1qnia2 306 A-EPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIK--HYNGDR--VNYIR------------------------ 356 (441)
T ss_dssp E-CCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHH--HHTTCC--CCCEE------------------------
T ss_pred E-ECCCCCCCCCCEECCCCEEEECCCCCCEEEEECCCHHHH--HHCCCC--CCEEE------------------------
T ss_conf 6-014554766522657855998524431689723542213--322677--76568------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCC-EEEECCCCCEEEEEEC
Q ss_conf 5322223338999886681782338999-0898169981999839
Q 000410 1417 NQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDH 1460 (1553)
Q Consensus 1417 ~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~LlTgg~Dg~IrlWDl 1460 (1553)
.-.+.....+|...+.+..++|+| +|+++..-.+=|++.+
T Consensus 357 ----~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s~dr~~~~ 397 (441)
T d1qnia2 357 ----QKLDVQYQPGHNHASLTESRDADGKWLVVLSKFSKDRFLPV 397 (441)
T ss_dssp ----EEEECSSCEEEEEETTTTSTTCCCCEEEEEESCCGGGSCCC
T ss_pred ----ECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf ----64532668987752454223898848996574442557678
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.64 E-value=1.5e-05 Score=50.93 Aligned_cols=247 Identities=8% Similarity=0.096 Sum_probs=126.0
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCC-EEEE-EECCCCEEEEEEEE
Q ss_conf 745999907997999993999599994897753332222035641797128999832986-9999-80799399999331
Q 000410 1141 AVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA-QVVV-GACDGIIHMFSVDH 1218 (1553)
Q Consensus 1141 ~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~-~lvs-~s~DGsI~iwdi~~ 1218 (1553)
.-..++++++++.+++-...+.|++||.+. +....+.....-.........+.+..+.. .+++ .+.++.|..++..
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~G-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 101 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY- 101 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-
T ss_pred CCCEEEECCCCCEEEEECCCCEEEEEECCC-CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC-
T ss_conf 900799949998999979989899996999-999981665788664226630001234455200004775310000025-
Q ss_pred CCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCCCCCCCEEEEEE
Q ss_conf 25688864334564342100269984899998127998503999995896399996998964430005888766389999
Q 000410 1219 ISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1298 (1553)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~ 1298 (1553)
+. ...............++..++ +.++++....+.+.++|.. ++...++....+......+++
T Consensus 102 -----g~--------~~~~~~~~~~~~p~~~avd~~---G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~ 164 (279)
T d1q7fa_ 102 -----GQ--------FVRKFGATILQHPRGVTVDNK---GRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVV 164 (279)
T ss_dssp -----SC--------EEEEECTTTCSCEEEEEECTT---SCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEE
T ss_pred -----CC--------CEEECCCCCCCCCCEECCCCC---CCEEEEEECCCEEEEECCC-CCEEECCCCCCCCCCCCEEEE
T ss_conf -----63--------024038886425420000147---8479996326325676268-750100220010256624320
Q ss_pred CCCCCEEEEEECCCCEEEEECCCCCCCCEEECCC-CCCCCEEEEECCCCCCCCCCCCCCEEEEEEC-CCEEEEEECCCCC
Q ss_conf 6999899999279939999688896435265035-6883148964599997544689988999976-9939999958881
Q 000410 1299 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVAAG-CNEVSLWNAENGS 1376 (1553)
Q Consensus 1299 sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~-~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~-dg~I~iWDi~tg~ 1376 (1553)
+++++.+++....+.|.+||.. +..+..+.... ......+++ .+ ++.++++-.. +..|.+|+- +|+
T Consensus 165 d~~g~i~v~d~~~~~V~~~d~~-G~~~~~~g~~g~~~~P~giav-D~---------~G~i~Vad~~~~~~v~~f~~-~G~ 232 (279)
T d1q7fa_ 165 NDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGI-NS---------NGEILIADNHNNFNLTIFTQ-DGQ 232 (279)
T ss_dssp CSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEE-CT---------TCCEEEEECSSSCEEEEECT-TSC
T ss_pred CCCEEEEEEECCCCCEEEEECC-CCEEEEECCCCCCCCCCCCCC-CC---------CCEEEEEECCCCCEEEEECC-CCC
T ss_conf 1200178620135510023047-944453011321148762323-14---------78699997899808999999-999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCEEE
Q ss_conf 89998614689987667776323589988999863222445322223338999886681782338999089816998199
Q 000410 1377 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIR 1456 (1553)
Q Consensus 1377 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~LlTgg~Dg~Ir 1456 (1553)
....+..... ....+.++..++|.++.+..+++|+
T Consensus 233 ~~~~~~~~~~---------------------------------------------~~~p~~vav~~dG~l~V~~~n~~v~ 267 (279)
T d1q7fa_ 233 LISALESKVK---------------------------------------------HAQCFDVALMDDGSVVLASKDYRLY 267 (279)
T ss_dssp EEEEEEESSC---------------------------------------------CSCEEEEEEETTTEEEEEETTTEEE
T ss_pred EEEEEECCCC---------------------------------------------CCCEEEEEEECCCCEEEEECCCEEE
T ss_conf 9999968888---------------------------------------------8988379990899199991899699
Q ss_pred EEECCCC
Q ss_conf 9839999
Q 000410 1457 RWDHCSP 1463 (1553)
Q Consensus 1457 lWDl~~~ 1463 (1553)
+|.....
T Consensus 268 ~fr~~~~ 274 (279)
T d1q7fa_ 268 IYRYVQL 274 (279)
T ss_dssp EEECSCC
T ss_pred EEEEEEE
T ss_conf 9872203
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.58 E-value=2.2e-05 Score=49.74 Aligned_cols=211 Identities=10% Similarity=-0.001 Sum_probs=129.6
Q ss_pred CEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCC
Q ss_conf 37545022445745999907997999993999599994897753332222035641797128999832986999980799
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1209 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DG 1209 (1553)
+.++.+.... .+..++++|||++++|...+++|..||..... ..+....+.+.+++|.++++.+++...++
T Consensus 19 ~v~~~~p~~~-~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~--------~~~~~~~~~~~gla~~~dG~l~v~~~~~~ 89 (302)
T d2p4oa1 19 KIITSFPVNT-FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ--------QIHATVEGKVSGLAFTSNGDLVATGWNAD 89 (302)
T ss_dssp EEEEEECTTC-CEEEEEECTTSCEEEEETTTTEEEEECTTCCE--------EEEEECSSEEEEEEECTTSCEEEEEECTT
T ss_pred CEEEECCCCC-CCCCEEECCCCCEEEEECCCCEEEEEECCCCE--------EEEECCCCCCCEEEECCCCCEEEEECCCC
T ss_conf 0788888998-84787799998899996889989999089988--------99971799853689867788699832895
Q ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEC----
Q ss_conf 3999993312568886433456434210026998489999812799850399999589639999699896443000----
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK---- 1285 (1553)
Q Consensus 1210 sI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~---- 1285 (1553)
.+..|+..... + ................+.+.++ +.++++.+.++.+..+|...+.....+.
T Consensus 90 ~~~~~~~~~~~---~--------~~~~~~~~~~~~~~n~i~~~~~---g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~ 155 (302)
T d2p4oa1 90 SIPVVSLVKSD---G--------TVETLLTLPDAIFLNGITPLSD---TQYLTADSYRGAIWLIDVVQPSGSIWLEHPML 155 (302)
T ss_dssp SCEEEEEECTT---S--------CEEEEEECTTCSCEEEEEESSS---SEEEEEETTTTEEEEEETTTTEEEEEEECGGG
T ss_pred EEEEEEECCCC---C--------CEEECCCCCCCCCCCEEEECCC---CCEEEECCCCCCCEEEECCCCCCEEEECCCCC
T ss_conf 37888710111---1--------0121023578632216677157---97875035655410242168730367518864
Q ss_pred ----CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf ----5888766389999699989999927993999968889643526503568831489645999975446899889999
Q 000410 1286 ----AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1286 ----~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~ 1361 (1553)
.......+..+.++.+ ..+++.+..+.+..+|............. ........+.++.+|.+.++.
T Consensus 156 ~~~~~~~~~~~~ngi~~~~~-~l~~~~~~~~~i~~~~~~~~~~~~~~~~~---------~~~~~pdgia~d~dG~l~va~ 225 (302)
T d2p4oa1 156 ARSNSESVFPAANGLKRFGN-FLYVSNTEKMLLLRIPVDSTDKPGEPEIF---------VEQTNIDDFAFDVEGNLYGAT 225 (302)
T ss_dssp SCSSTTCCSCSEEEEEEETT-EEEEEETTTTEEEEEEBCTTSCBCCCEEE---------EESCCCSSEEEBTTCCEEEEC
T ss_pred CEEECCCCCCCCCCCCCCCC-CEEEECCCCCEEEECCCCCCCCCCCCCCC---------CCCCCCCCEEECCCCCEEEEE
T ss_conf 01431576322432011698-30440378876986344333323453101---------589987523787999999997
Q ss_pred ECCCEEEEEECC
Q ss_conf 769939999958
Q 000410 1362 AGCNEVSLWNAE 1373 (1553)
Q Consensus 1362 s~dg~I~iWDi~ 1373 (1553)
..++.|..++..
T Consensus 226 ~~~~~V~~i~p~ 237 (302)
T d2p4oa1 226 HIYNSVVRIAPD 237 (302)
T ss_dssp BTTCCEEEECTT
T ss_pred CCCCCEEEECCC
T ss_conf 489918998789
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=3.9e-08 Score=69.18 Aligned_cols=143 Identities=14% Similarity=0.198 Sum_probs=98.5
Q ss_pred HHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCC--CCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHH---HHH
Q ss_conf 822999996999999833300000138656553--212222213569875589999710241345304311457---488
Q 000410 673 LVMGPKQTPSIRRALLQDIGNLCSFFGQRQSND--FLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEE---YLL 747 (1553)
Q Consensus 673 ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd--~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~---~il 747 (1553)
.+.+.+.+..||.+.+..+..++.-+|.....+ -+|+.++..+++. ..|.+-...+..++.......++. -++
T Consensus 572 ~l~~~~~~~e~~~~al~~l~~l~~~~~~~~~~~~~~~l~~l~~~l~~~--~~r~~a~~~l~~i~~~~~~~~~~~~l~~~~ 649 (1207)
T d1u6gc_ 572 RLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNE--ITRLTTVKALTLIAGSPLKIDLRPVLGEGV 649 (1207)
T ss_dssp HHSCSSSCHHHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHTTSS--SHHHHHHHHHHHHTTCSSCCCCHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 987313101788989999998988765565888888877788874230--457999999999987313214789998888
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 8887632798248899999999999981--988457899999853112347859999999999999960389
Q 000410 748 PYIEQALSDATEAVIVNALDCLAILCKS--GYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLG 817 (1553)
Q Consensus 748 Pll~q~l~D~eE~Vv~~~l~~l~~l~~~--gl~~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l~ 817 (1553)
|.+...|.+..+.+-..++.+|..+++. +-+.+..+-.++....+++.+.+..+|+.++.++..+++..+
T Consensus 650 ~~l~~~l~~~~~~~r~~al~~L~~l~~~~~~~~~~~~~~~~l~~l~~ll~~~d~~v~~~~l~~l~~l~~~~~ 721 (1207)
T d1u6gc_ 650 PILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYP 721 (1207)
T ss_dssp HHHHHHTTSCCHHHHHHHHHHHHHHHHHCCTTCCHHHHHHHHTTCGGGSCTTCHHHHHHHHHHHHHHTTSCG
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 898775014438899999999999998454210067776677763244434407889999999888886263
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.54 E-value=2.4e-05 Score=49.42 Aligned_cols=184 Identities=10% Similarity=0.039 Sum_probs=103.4
Q ss_pred CCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEE
Q ss_conf 55575375450224457459999079979999939995999948977533322220356417971289998329869999
Q 000410 1125 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV 1204 (1553)
Q Consensus 1125 W~p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs 1204 (1553)
|+|.|... .+....+.+++++|++++.++++...++.+..|+........ ..............+++.++++.+++
T Consensus 54 i~p~g~~~-~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~n~i~~~~~g~~~v~ 129 (302)
T d2p4oa1 54 ITPDGNQQ-IHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV---ETLLTLPDAIFLNGITPLSDTQYLTA 129 (302)
T ss_dssp ECTTCCEE-EEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE---EEEEECTTCSCEEEEEESSSSEEEEE
T ss_pred EECCCCEE-EEECCCCCCCEEEECCCCCEEEEECCCCEEEEEEECCCCCCE---EECCCCCCCCCCCEEEECCCCCEEEE
T ss_conf 90899889-997179985368986778869983289537888710111101---21023578632216677157978750
Q ss_pred EECCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEE
Q ss_conf 80799399999331256888643345643421002699848999981279985039999958963999969989644300
Q 000410 1205 GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1205 ~s~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
.+.++.+..++..... ........... .............+.+.. +.++++.+..+.|..+|..........
T Consensus 130 ~~~~~~i~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~ngi~~~~----~~l~~~~~~~~~i~~~~~~~~~~~~~~ 201 (302)
T d2p4oa1 130 DSYRGAIWLIDVVQPS---GSIWLEHPMLA-RSNSESVFPAANGLKRFG----NFLYVSNTEKMLLLRIPVDSTDKPGEP 201 (302)
T ss_dssp ETTTTEEEEEETTTTE---EEEEEECGGGS-CSSTTCCSCSEEEEEEET----TEEEEEETTTTEEEEEEBCTTSCBCCC
T ss_pred CCCCCCCEEEECCCCC---CEEEECCCCCC-EEECCCCCCCCCCCCCCC----CCEEEECCCCCEEEECCCCCCCCCCCC
T ss_conf 3565541024216873---03675188640-143157632243201169----830440378876986344333323453
Q ss_pred CCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECC
Q ss_conf 058887663899996999899999279939999688
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLR 1320 (1553)
Q Consensus 1285 ~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr 1320 (1553)
......+.+..++++++|+..++...++.|..++..
T Consensus 202 ~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~ 237 (302)
T d2p4oa1 202 EIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 237 (302)
T ss_dssp EEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CCCCCCCCCCCEEECCCCCEEEEECCCCCEEEECCC
T ss_conf 101589987523787999999997489918998789
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.50 E-value=2.9e-06 Score=55.93 Aligned_cols=296 Identities=14% Similarity=0.139 Sum_probs=156.3
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCC---CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 780129999999999703699200---13422311210244887036789999999762446101899887663232334
Q 000410 511 KLPHYRRAAILLLKSSSLFIDDED---RLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPM 587 (1553)
Q Consensus 511 ~~~~sk~~~l~ll~~~s~~~~de~---~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~ 587 (1553)
.....+..|+..+..+++..+.+. .++-++|.++.++.|+++.||..|+.++.++......... +...++.. ++.
T Consensus 381 ~~~~~~~~a~~~l~~i~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~-~~~~~~~l-l~~ 458 (861)
T d2bpta1 381 DNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESID-PQQHLPGV-VQA 458 (861)
T ss_dssp SSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSC-TTTTHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHH-HHHHHHHH-HHH
T ss_conf 7778888899899998841026668887899999998873376205666898899999998130100-47762045-689
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH-------HHH
Q ss_conf 67999999822568788418999999999---------99999974201344446899999999984201-------211
Q 000410 588 LSMLPDDPEESVRICYASNIAKLALTAYG---------FLVHSIRLSEAGVLDKLSAPHKSPSSSNETSV-------QLQ 651 (1553)
Q Consensus 588 l~~l~~d~~~~vr~~~A~~l~~LA~~a~r---------fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 651 (1553)
+.....+ ...|+...+..+..+.+.... +......+ +....... .+..... ...
T Consensus 459 l~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~----~~~~~~~~~~~al~~~i 528 (861)
T d2bpta1 459 CLIGLQD-HPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDGL-----IGAANRID----NEFNARASAFSALTTMV 528 (861)
T ss_dssp HHHHHTS-CHHHHHHHHHHHHHHHHHHSSSSSCGGGGGHHHHHHHH-----HHHHTCSC----CGGGHHHHHHHHHHHHH
T ss_pred HHHCCCC-CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-----HHHHHHHH----HHHHHHHHHHHHHHHHH
T ss_conf 9860246-70899999999999998752302211468875478899-----99874212----34899999999899999
Q ss_pred -CCCH--HHHHHHHHHHHHHHHHHHHCCCCC--CH-------HHHHHHHHCCCCHHCCCCCCC--CCCCCCCCCCCCCCC
Q ss_conf -1460--899999999999999998229999--96-------999999833300000138656--553212222213569
Q 000410 652 -RLNA--DVQLSQLRKSIAEVVQELVMGPKQ--TP-------SIRRALLQDIGNLCSFFGQRQ--SNDFLLPILPAFLND 717 (1553)
Q Consensus 652 -~~~~--~~~l~~l~~~~~~~~~~ll~~~d~--~~-------~vk~all~~i~~Lc~FFG~~k--tnd~iL~hlit~LNd 717 (1553)
.... ...+..+...+...+...+..... .. .++..++.-+..++..++..- -.+-++..++..+++
T Consensus 529 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~l~~~l~~~l~~ 608 (861)
T d2bpta1 529 EYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEK 608 (861)
T ss_dssp HHCCGGGHHHHHHHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGTGGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 98688889999999999999999999888654116677679999999999999998615365799999999997510015
Q ss_pred -CCHHHHHHHHHCCCEEEEEECCCHHHHH---HHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHCC
Q ss_conf -8755899997102413453043114574---8888876327982488999999999999819-8845789999985311
Q 000410 718 -RDEQLRAVFYGQIVYVCFFVGERSVEEY---LLPYIEQALSDATEAVIVNALDCLAILCKSG-YLRKRILLEMIERAFP 792 (1553)
Q Consensus 718 -~d~~LR~aff~~i~~v~~~vG~~s~e~~---ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~g-l~~k~~~~~~~~~~~~ 792 (1553)
.++.+|...+..+..++..+|... +.| ++|.+.++|.|.++.|...++..+..+++.. -.-+++.-+++.....
T Consensus 609 ~~~~~v~~~~l~~l~~l~~~~~~~~-~~~l~~i~p~l~~~l~~~~~~v~~~a~~~l~~i~~~~~~~~~~~~~~i~~~L~~ 687 (861)
T d2bpta1 609 KDSAFIEDDVFYAISALAASLGKGF-EKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQ 687 (861)
T ss_dssp TTGGGTHHHHHHHHHHHHHHHGGGG-HHHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHHHHTGGGGHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8836588789999988887745789-999999705999873799889999999999999997578727119999999999
Q ss_pred CCCCCC--HHHHHHHHHHHHHHHHCCCCC
Q ss_conf 234785--999999999999996038944
Q 000410 793 LLCYPS--QWVRRSVVTFIAASSESLGAV 819 (1553)
Q Consensus 793 ll~HPn--~wIR~~~~~~i~~~~~~l~~a 819 (1553)
.+-.|| .=+|.+++..+..++..++..
T Consensus 688 ~l~~~~~~~~~k~~~~~~l~~i~~~~~~~ 716 (861)
T d2bpta1 688 MISNPNARRELKPAVLSVFGDIASNIGAD 716 (861)
T ss_dssp HHHCTTCCTTHHHHHHHHHHHHHHHHGGG
T ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85788888999999999999999998798
|
| >d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HEAT repeat domain: Cullin-associated NEDD8-dissociated protein 1 (Tip120) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=1.9e-07 Score=64.26 Aligned_cols=98 Identities=9% Similarity=0.065 Sum_probs=42.2
Q ss_pred CCHHHHHHHHHCCCEEEEEECCCH--HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHCCC
Q ss_conf 875589999710241345304311--45748888876327982488999999999999819--88457899999853112
Q 000410 718 RDEQLRAVFYGQIVYVCFFVGERS--VEEYLLPYIEQALSDATEAVIVNALDCLAILCKSG--YLRKRILLEMIERAFPL 793 (1553)
Q Consensus 718 ~d~~LR~aff~~i~~v~~~vG~~s--~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~g--l~~k~~~~~~~~~~~~l 793 (1553)
.|.+.|.+-..++..+....|... .-..++|.+...+.+. ..-..++.++..++... .--.+.+-+.+.....+
T Consensus 578 ~~~e~~~~al~~l~~l~~~~~~~~~~~~~~~l~~l~~~l~~~--~~r~~a~~~l~~i~~~~~~~~~~~~l~~~~~~l~~~ 655 (1207)
T d1u6gc_ 578 IDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNE--ITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASF 655 (1207)
T ss_dssp SCHHHHHHHHHHHHHHHHHTGGGCCTHHHHHHHHHHHHTTSS--SHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH--HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 101788989999998988765565888888877788874230--457999999999987313214789998888898775
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 347859999999999999960389
Q 000410 794 LCYPSQWVRRSVVTFIAASSESLG 817 (1553)
Q Consensus 794 l~HPn~wIR~~~~~~i~~~~~~l~ 817 (1553)
+-.+|.-+|.+++..+..+....+
T Consensus 656 l~~~~~~~r~~al~~L~~l~~~~~ 679 (1207)
T d1u6gc_ 656 LRKNQRALKLGTLSALDILIKNYS 679 (1207)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 014438899999999999998454
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=6.7e-07 Score=60.43 Aligned_cols=299 Identities=18% Similarity=0.085 Sum_probs=135.7
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC--CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 2258888431026780129999999999703699200--13422311210244887036789999999762446101899
Q 000410 498 LIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDED--RLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPS 575 (1553)
Q Consensus 498 i~~~~i~s~~R~~~~~~sk~~~l~ll~~~s~~~~de~--~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~ 575 (1553)
.++.++...+.+- .+..|-.|+-.+-++++-..+.. .|+.++|+++.++.|+.+.||..|+.+|.++...+ .+.
T Consensus 395 ~~l~~l~~~l~s~-~~~~reaa~~alg~i~eg~~~~~~~~l~~li~~l~~~l~d~~~~Vr~~a~~~l~~~~~~~---~~~ 470 (888)
T d1qbkb_ 395 HILPLLKELLFHH-EWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWV---VSQ 470 (888)
T ss_dssp HHHHHHHHTTTSS-SHHHHHHHHHHHHHHTTTSHHHHTTTHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTHHHH---HSS
T ss_pred HHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH---HHH
T ss_conf 9999988751220-568999999986435555787742120355679998426998999999999999999986---654
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 88766323233467999999822568788418999999999999-----9997420134444689999999998420121
Q 000410 576 DAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLV-----HSIRLSEAGVLDKLSAPHKSPSSSNETSVQL 650 (1553)
Q Consensus 576 ~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (1553)
...-|-+-++|.+-....|++..||.+-+.+|..|++.+..-+. +.+.+-. .+.. . ......
T Consensus 471 ~~~~~~~~~l~~ll~~l~d~~~~V~~~a~~al~~l~~~~~~~l~p~~~~il~~l~~--~l~~---~--------~~~~~~ 537 (888)
T d1qbkb_ 471 PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVF--AFSK---Y--------QHKNLL 537 (888)
T ss_dssp CHHHHTTTHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTTSSGGGHHHHHHHHHH--HTTT---C--------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH---H--------HHHHHH
T ss_conf 15655455589999884289878999899999999987553113579999999999--9860---0--------377999
Q ss_pred H--------------CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCC------CCCCCC
Q ss_conf 1--------------14608999999999999999982299999699999983330000013865655------321222
Q 000410 651 Q--------------RLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSN------DFLLPI 710 (1553)
Q Consensus 651 ~--------------~~~~~~~l~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktn------d~iL~h 710 (1553)
. ..+....++.+...+.+.... +. +++ .....+++.+..++..+|..-.. +-++..
T Consensus 538 ~~~~al~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~--~~~-~~~~~~le~l~~i~~~~~~~~~~~~~~~~~~~~~~ 613 (888)
T d1qbkb_ 538 ILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNM-LK--DED-KDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNL 613 (888)
T ss_dssp HHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHTT-SC--TTC-TTHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-CC--CCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999986231013367999999999999975-12--106-88999999999999986787765699999999988
Q ss_pred CCC-------------CCCCCCHHHHHHHHHCCCEEEEEECCCHHHHH-----HHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 221-------------35698755899997102413453043114574-----888887632798248899999999999
Q 000410 711 LPA-------------FLNDRDEQLRAVFYGQIVYVCFFVGERSVEEY-----LLPYIEQALSDATEAVIVNALDCLAIL 772 (1553)
Q Consensus 711 lit-------------~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~-----ilPll~q~l~D~eE~Vv~~~l~~l~~l 772 (1553)
+.. ...+.|..+..+.++.+.+++..+|... ++| ++|++.+++.|...-|-..++..+..+
T Consensus 614 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~~-~~~~~~~~l~~~l~~~l~~~~~~vr~~a~~llgdl 692 (888)
T d1qbkb_ 614 VQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNI-EQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDL 692 (888)
T ss_dssp HHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHTTTT-HHHHHTSCHHHHHHHHHTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 99899999987416201100068899999999888998730566-66665856999999996799768999999998877
Q ss_pred HHC-CCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 981-9884578999998531123478599999999999999603894
Q 000410 773 CKS-GYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSESLGA 818 (1553)
Q Consensus 773 ~~~-gl~~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l~~ 818 (1553)
++. +---++++-+++.....-|-+++.=++..++.-+..++..++.
T Consensus 693 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~v~~~a~~~ig~ia~~~~~ 739 (888)
T d1qbkb_ 693 TKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMGI 739 (888)
T ss_dssp HHHCGGGTGGGHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 87516877877999999999873867789999999999999998779
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.42 E-value=5.5e-05 Score=46.85 Aligned_cols=163 Identities=8% Similarity=0.014 Sum_probs=91.0
Q ss_pred ECCCCC--CCEEEEEECCCCCEEEEE-ECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 502244--574599990799799999-39995999948977533322220356417971289998329869999807993
Q 000410 1134 HLQEHC--SAVNEIAISHDHSFFVSA-SDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1134 ~l~~H~--~~V~~i~~spd~~~laSg-S~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DGs 1210 (1553)
.+.++. -.-..+++++++..+++. +..+.+..++...... ....... ......+++.++++.+++....+.
T Consensus 6 ~~~~~~~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~-----~~~~~~~-~~~p~gvav~~~g~i~v~d~~~~~ 79 (260)
T d1rwia_ 6 PFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-----TVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRV 79 (260)
T ss_dssp CCCSCCSCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CE-----EECCCCS-CCSCCCEEECTTCCEEEEETTTEE
T ss_pred ECCCCCCCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCEE-----EEECCCC-CCCCEEEEECCCCCEEEEEEEECE
T ss_conf 3155777698788999699999999718998899993899668-----9743698-668408999389988986310000
Q ss_pred EEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCCCCCEECCCCCC
Q ss_conf 99999331256888643345643421002699848999981279985039999958963999969989644300058887
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
+++++-.. ...............++++++ ++++++-.....+..++........ ... ...
T Consensus 80 i~~~~~~~---------------~~~~~~~~~~~~p~~iavd~~---g~i~v~d~~~~~~~~~~~~~~~~~~-~~~-~~~ 139 (260)
T d1rwia_ 80 VTLAAGSN---------------NQTVLPFDGLNYPEGLAVDTQ---GAVYVADRGNNRVVKLAAGSKTQTV-LPF-TGL 139 (260)
T ss_dssp EEECTTCS---------------CCEECCCCSCCSEEEEEECTT---CCEEEEEGGGTEEEEECTTCSSCEE-CCC-CSC
T ss_pred EEEEEECC---------------CEEEEEEEEEEECCCCCCCCC---CEEEEECCCCCCCCCCCCCCCEEEE-EEE-CCC
T ss_conf 35542112---------------000000100000000024553---2057503355532112322220122-320-366
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 66389999699989999927993999968889
Q 000410 1291 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL 1322 (1553)
Q Consensus 1291 g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~ 1322 (1553)
....+++++++++.+++...++.+..+|....
T Consensus 140 ~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~ 171 (260)
T d1rwia_ 140 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 171 (260)
T ss_dssp CSCCEEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred CCCCEEEECCCCCEEEECCCCCCCCCCCCCCC
T ss_conf 77520545489988641025643322234310
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=98.37 E-value=7.1e-05 Score=46.06 Aligned_cols=251 Identities=11% Similarity=0.113 Sum_probs=109.0
Q ss_pred CEEEEEECCCCCEEEEEEC-------CCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCCEEE
Q ss_conf 7459999079979999939-------995999948977533322220356417971289998329869999807993999
Q 000410 1141 AVNEIAISHDHSFFVSASD-------DSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHM 1213 (1553)
Q Consensus 1141 ~V~~i~~spd~~~laSgS~-------DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~DGsI~i 1213 (1553)
..-.++|.+++.++++... +|.|..||..++........ ......+....+.|.++++.++++.....|..
T Consensus 19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~--~~~~~~g~P~Gl~~~~dg~~l~vad~~~~i~~ 96 (314)
T d1pjxa_ 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKP--EVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECC--EETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECC--CCCCCCCCCEEEEEECCCCEEEEEECCCEEEE
T ss_conf 9717399699999999875402345299999998999959999777--65567885306999079998999977983999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCEECCCCCCC---EEEEEEECCCCCCCEEEEEEEC---------------CCEEEEEEC
Q ss_conf 9933125688864334564342100269984---8999981279985039999958---------------963999969
Q 000410 1214 FSVDHISRGLGNVEKYSGISDIKKKDTKEGA---IVTLVNYNTDNCASHMFMYSTQ---------------NCGIHLWDT 1275 (1553)
Q Consensus 1214 wdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~i~~~~~~~s~~~L~~~s~---------------dg~I~iwDl 1275 (1553)
++.+... ..+... ...+. ..+.+.+.++ |.+.++-.. .|.|..++.
T Consensus 97 ~~~~g~~------------~~~~~~-~~~g~~~~~pndl~~d~~---G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~ 160 (314)
T d1pjxa_ 97 VQTDGTF------------EEIAKK-DSEGRRMQGCNDCAFDYE---GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT 160 (314)
T ss_dssp EETTSCE------------EECCSB-CTTSCBCBCCCEEEECTT---SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT
T ss_pred EECCCCE------------EEEEEC-CCCCCCCCCCCEEEECCC---CCEEEECCCCCCCCCCCCCEECCCCCEEEEEEE
T ss_conf 9477747------------999733-432454578727898889---989991486675432011000268843899952
Q ss_pred CCCCCCCEECCCCCCCCEEEEEECCCCC----EE-EEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCC
Q ss_conf 9896443000588876638999969998----99-999279939999688896435265035688314896459999754
Q 000410 1276 RSNSNTWTLKAIPEEGYVSSLVTGPCGN----WF-VSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAV 1350 (1553)
Q Consensus 1276 rt~~~~~~l~~~~h~g~Itsi~~sp~g~----~L-vsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~ 1350 (1553)
. ++...... .....+.++|++++. .| ++-+..+.|..||+.....+.........+... ...+..++
T Consensus 161 d-g~~~~~~~---~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~----~~~pdGia 232 (314)
T d1pjxa_ 161 D-GQMIQVDT---AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTH----EGGADGMD 232 (314)
T ss_dssp T-SCEEEEEE---EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCS----SCEEEEEE
T ss_pred C-CCEEEEEC---CCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCC----CCCCEEEE
T ss_conf 5-74037507---8532213699788776303799986024311776116765430156899713356----66410257
Q ss_pred CCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 46899889999769939999958881899986146899876677763235899889998632224453222233389998
Q 000410 1351 STTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPP 1430 (1553)
Q Consensus 1351 ~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 1430 (1553)
...+|++.++..+.+.|.+||.+.+.....+....
T Consensus 233 vD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~--------------------------------------------- 267 (314)
T d1pjxa_ 233 FDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF--------------------------------------------- 267 (314)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS---------------------------------------------
T ss_pred EECCCCEEEEECCCCEEEEEECCCCEEEEEEECCC---------------------------------------------
T ss_conf 83478579998279999999699997999997999---------------------------------------------
Q ss_pred CCCCCEEECCCCCC-E-EEECCCCCEEEEEECCCCC
Q ss_conf 86681782338999-0-8981699819998399999
Q 000410 1431 RLLGIRSLLPLPGG-D-LLTGGTDLKIRRWDHCSPG 1464 (1553)
Q Consensus 1431 ~~~~V~sl~~sp~g-~-LlTgg~Dg~IrlWDl~~~~ 1464 (1553)
....+++|.+++ . ++|.+..++|...++..+.
T Consensus 268 --~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~G 301 (314)
T d1pjxa_ 268 --EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp --SCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred --CCEEEEEEECCCCEEEEEECCCCCEEEEECCCCC
T ss_conf --9878999928989999998789919999789999
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.26 E-value=9.9e-06 Score=52.13 Aligned_cols=137 Identities=11% Similarity=-0.008 Sum_probs=87.8
Q ss_pred CEEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC-CCCEEEEEEEEEECCEEEEEE
Q ss_conf 5699988502570999999988955999999516997478999999999999996189-997548879998088799990
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIl~~~~~~~~~~~~~LV~ 104 (1553)
.|...+..+.+....||+....++.+++|+........ .. .+.+|...+..+. +--+.+++.+.+.+...|+|+
T Consensus 15 ~~~~~~~~~G~s~~~v~rv~~~~~~~vlk~~~~~~~~~-~~----~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~ 89 (263)
T d1j7la_ 15 KYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGT-TY----DVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp TSEEEECSCCCSSSEEEEEECSSCEEEEEEECGGGTTS-TT----CHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred CEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCC-HH----HHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEE
T ss_conf 52799767899877189999089869999848876532-55----69999999998760699872899975089649999
Q ss_pred CCCCC-CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---------------------------------------
Q ss_conf 35359-98888609999999999999999999999999889---------------------------------------
Q 000410 105 QYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--------------------------------------- 144 (1553)
Q Consensus 105 e~~~g-sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~g--------------------------------------- 144 (1553)
++++| ++.+..... .....++.++...+..+|+..
T Consensus 90 ~~l~G~~~~~~~~~~-----~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (263)
T d1j7la_ 90 SEADGVLCSEEYEDE-----QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPF 164 (263)
T ss_dssp ECCSSEEHHHHTTTC-----SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSC
T ss_pred EECCCCCCCCCCCCC-----CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 860433435433440-----269999998999999985568421435764465655577899877655554303323200
Q ss_pred --------------------CEECCCCCCCEEEECCCCEEEEECCCCC
Q ss_conf --------------------8525788996899139929994137632
Q 000410 145 --------------------ICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 145 --------------------IiH~DIKpeNILi~~~~~vkL~DFg~~k 172 (1553)
++|||+.+.|||++.++.+-|+||+.+.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T d1j7la_ 165 KDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCEEEEEECHHCC
T ss_conf 579999999984498678178986004764236499659996023144
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=98.23 E-value=0.00014 Score=43.96 Aligned_cols=178 Identities=7% Similarity=0.051 Sum_probs=84.2
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEE-E-EEE-CCCCEEEE
Q ss_conf 44574599990799799999399959999489775333222203564179712899983298699-9-980-79939999
Q 000410 1138 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV-V-VGA-CDGIIHMF 1214 (1553)
Q Consensus 1138 H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~l-v-s~s-~DGsI~iw 1214 (1553)
+...+.-++++|+++++.+++. +.+..|.+...... ...... ..+.....+.++++++.+ + ++. ..+++..+
T Consensus 38 ~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~---~~~~~~-~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~ 112 (365)
T d1jofa_ 38 QDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEI---VHEASH-PIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEE---EEEEEE-ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCCEEEECCCCCEEEEEEC-CCEEEEEEECCCCE---EEEEEE-CCCCCCEEEEECCCCCEEEEEEECCCCCEEEEE
T ss_conf 8999777999489899999938-94789999089976---987641-289986789987899879999932799789986
Q ss_pred EEEECCCCCCCCC---CCCCC-CCCEECCCCCCCEEEEEEECCCCCCCEEEEEEE-CCCEEEEEECCCCCC---CCEECC
Q ss_conf 9331256888643---34564-342100269984899998127998503999995-896399996998964---430005
Q 000410 1215 SVDHISRGLGNVE---KYSGI-SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYST-QNCGIHLWDTRSNSN---TWTLKA 1286 (1553)
Q Consensus 1215 di~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s-~dg~I~iwDlrt~~~---~~~l~~ 1286 (1553)
.+.... ..+... ..... ........+.+..+..+.|+|+ +++++++. ....|.+|+...... ......
T Consensus 113 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPd---G~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~ 188 (365)
T d1jofa_ 113 PFYKFA-GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT---ETYLYSADLTANKLWTHRKLASGEVELVGSVDA 188 (365)
T ss_dssp EESSSC-CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT---SSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred ECCCCC-CCCEEEEEEECCEECCCCCCCCCCCCCCCEEEEECCC---CCEEEEEECCCCEEEEEECCCCCCEEECCCEEE
T ss_conf 745788-7420686640330047646755688981159788899---998998207998799997068871665251111
Q ss_pred CCCCCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCC
Q ss_conf 8887663899996999899-9992799399996888964
Q 000410 1287 IPEEGYVSSLVTGPCGNWF-VSGSSRGVLTLWDLRFLVP 1324 (1553)
Q Consensus 1287 ~~h~g~Itsi~~sp~g~~L-vsGs~dG~I~iWDlr~~~~ 1324 (1553)
......++.++|+|+++++ +++..++.|.+||+.....
T Consensus 189 ~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~ 227 (365)
T d1jofa_ 189 PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATH 227 (365)
T ss_dssp SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCC
T ss_conf 278874089998899866999515899899999559875
|
| >d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.19 E-value=1.6e-06 Score=57.80 Aligned_cols=270 Identities=14% Similarity=0.116 Sum_probs=149.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCC----CCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7801299999999997036992001342----231121024488703678999999976244610189988766323233
Q 000410 511 KLPHYRRAAILLLKSSSLFIDDEDRLQR----VLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILP 586 (1553)
Q Consensus 511 ~~~~sk~~~l~ll~~~s~~~~de~~ldr----ilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP 586 (1553)
....-|..|+..+..+..++.+....+- +++-+...+.+..+.||..|++++..+.... ++++.|
T Consensus 193 ~~~~v~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~-----------~~~~~~ 261 (861)
T d2bpta1 193 TSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKY-----------YTFMKP 261 (861)
T ss_dssp CCHHHHHHHHHHHHHHGGGCHHHHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHH-----------GGGCHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH-----------HHHHHH
T ss_conf 789999999999999999876767766654477776798856998999999999999998877-----------899999
Q ss_pred CC--------CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHH
Q ss_conf 46--------7999999822568788418999999999999999742013444468999999999842012111460899
Q 000410 587 ML--------SMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQ 658 (1553)
Q Consensus 587 ~l--------~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (1553)
.+ .....+.++.||....+.+..+++....+......... .....++. .
T Consensus 262 ~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~~---------------------~~~~~~~~--~ 318 (861)
T d2bpta1 262 YMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQ---------------------SPLQSYNF--A 318 (861)
T ss_dssp HHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT---------------------CSCCCCCH--H
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------HHHHHHHH--H
T ss_conf 999899999998732754999999999999999999889999986203---------------------67899999--9
Q ss_pred HHHHHHHHHHHHHHHHCCC-----CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEE
Q ss_conf 9999999999999982299-----99969999998333000001386565532122222135698755899997102413
Q 000410 659 LSQLRKSIAEVVQELVMGP-----KQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYV 733 (1553)
Q Consensus 659 l~~l~~~~~~~~~~ll~~~-----d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v 733 (1553)
...+...+...+ ..+... +.+..++.+...-+..++..+|.+ ....+++.+..++++.||..|-+.+..+..+
T Consensus 319 ~~~l~~i~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i 396 (861)
T d2bpta1 319 LSSIKDVVPNLL-NLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNH-ILEPVLEFVEQNITADNWRNREAAVMAFGSI 396 (861)
T ss_dssp HHHHHHHHHHHH-HHTTCCCCC-CCCCCHHHHHHHHHHHHHHHHHGGG-GHHHHHHHHHHHTTCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH-HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999-99887302444014778888999988877603314-6654111135420017778888899899998
Q ss_pred EEEECCCHHHH---HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC--CCCCHH-HHHHHHHHHCCCCCCCCHHHHHHHHH
Q ss_conf 45304311457---4888887632798248899999999999981--988457-89999985311234785999999999
Q 000410 734 CFFVGERSVEE---YLLPYIEQALSDATEAVIVNALDCLAILCKS--GYLRKR-ILLEMIERAFPLLCYPSQWVRRSVVT 807 (1553)
Q Consensus 734 ~~~vG~~s~e~---~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~--gl~~k~-~~~~~~~~~~~ll~HPn~wIR~~~~~ 807 (1553)
+...+...++. -++|.+.+.|.|+++.|...++.++..+++. ..+.+. .+-.++... --.+..+..++..++.
T Consensus 397 ~~~~~~~~~~~~l~~~l~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~ll~~l-~~~~~~~~~~~~~~~~ 475 (861)
T d2bpta1 397 MDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQAC-LIGLQDHPKVATNCSW 475 (861)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHHH-HHHHTSCHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH-HHCCCCCHHHHHHHHH
T ss_conf 841026668887899999998873376205666898899999998130100477620456899-8602467089999999
Q ss_pred HHHHHHHCCC
Q ss_conf 9999960389
Q 000410 808 FIAASSESLG 817 (1553)
Q Consensus 808 ~i~~~~~~l~ 817 (1553)
.+......+.
T Consensus 476 ~~~~l~~~~~ 485 (861)
T d2bpta1 476 TIINLVEQLA 485 (861)
T ss_dssp HHHHHHHHHS
T ss_pred HHHHHHHHHH
T ss_conf 9999998752
|
| >d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin beta2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=7.3e-06 Score=53.10 Aligned_cols=291 Identities=16% Similarity=0.182 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999703699200134223112102448870367899999997624461-018998876632323346799999
Q 000410 516 RRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVR-NFPPSDAKIFPEYILPMLSMLPDD 594 (1553)
Q Consensus 516 k~~~l~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~-~~~~~~~~iF~eYilP~l~~l~~d 594 (1553)
|..+...|-.+++...++ .+..++|++...+.+++..+|-+|+.++..+..-+. .+.| +-+-++|.|..+..|
T Consensus 374 r~~a~~~L~~l~~~~~~~-il~~~l~~l~~~l~s~~~~~reaa~~alg~i~eg~~~~~~~-----~l~~li~~l~~~l~d 447 (888)
T d1qbkb_ 374 RKCSAAALDVLANVYRDE-LLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIP-----YLPELIPHLIQCLSD 447 (888)
T ss_dssp HHHHHHHSTTTTTTCCSS-SHHHHHHHHHHTTTSSSHHHHHHHHHHHHHHTTTSHHHHTT-----THHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC-----CCHHHHHHHHHHCCC
T ss_conf 999999876676512999-99999999887512205689999999864355557877421-----203556799984269
Q ss_pred CCCHHHHHHHHHHHHHHHHHH-----HHHH-HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCH-----HHHHHHHH
Q ss_conf 982256878841899999999-----9999-999742013444468999999999842012111460-----89999999
Q 000410 595 PEESVRICYASNIAKLALTAY-----GFLV-HSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNA-----DVQLSQLR 663 (1553)
Q Consensus 595 ~~~~vr~~~A~~l~~LA~~a~-----rfl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~l~ 663 (1553)
++..||.+-+.||+.+++... .|+. .-..+ +....... ..........+.. ..++....
T Consensus 448 ~~~~Vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~l-----l~~l~d~~-----~~V~~~a~~al~~l~~~~~~~l~p~~ 517 (888)
T d1qbkb_ 448 KKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTEL-----LKRILDSN-----KRVQEAACSAFATLEEEACTELVPYL 517 (888)
T ss_dssp SCHHHHHHHHHHHHHTHHHHHSSCHHHHTTTHHHHH-----HHHHSSSC-----HHHHHHHHHHHHHHHHHHTTSSGGGH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHCCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 989999999999999999866541565545558999-----98842898-----78999899999999987553113579
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCC----CCCCCCCCCCCC---CCCHHHHHHHHHCCCEEEEE
Q ss_conf 99999999982299999699999983330000013865655----321222221356---98755899997102413453
Q 000410 664 KSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSN----DFLLPILPAFLN---DRDEQLRAVFYGQIVYVCFF 736 (1553)
Q Consensus 664 ~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktn----d~iL~hlit~LN---d~d~~LR~aff~~i~~v~~~ 736 (1553)
..+.+.+...+. +.+..++..+++-+..|+.--|..-.. +.+++.++.-+| +.|.. +...++++..++..
T Consensus 518 ~~il~~l~~~l~--~~~~~~~~~~~~al~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~~le~l~~i~~~ 594 (888)
T d1qbkb_ 518 AYILDTLVFAFS--KYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKD-LFPLLECLSSVATA 594 (888)
T ss_dssp HHHHHHHHHHTT--TCCHHHHHHHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHTTSCTTCTT-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHH-HHHHHHHHHHHHHH
T ss_conf 999999999986--003779999999999999862310133679999999999999751210688-99999999999998
Q ss_pred ECCCHHHHHHHHHHHHHC--------------------CCCCHHHHHHHHHHHHHHHH-CCCCCHHHHH--HHHHHHCCC
Q ss_conf 043114574888887632--------------------79824889999999999998-1988457899--999853112
Q 000410 737 VGERSVEEYLLPYIEQAL--------------------SDATEAVIVNALDCLAILCK-SGYLRKRILL--EMIERAFPL 793 (1553)
Q Consensus 737 vG~~s~e~~ilPll~q~l--------------------~D~eE~Vv~~~l~~l~~l~~-~gl~~k~~~~--~~~~~~~~l 793 (1553)
.|... ..|..|.+.+.+ .++++-++..++..+..+++ +|---...+. .+.......
T Consensus 595 ~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~~~~~~~~~~l~~~l~~~ 673 (888)
T d1qbkb_ 595 LQSGF-LPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQC 673 (888)
T ss_dssp STTTT-HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSCCCCTHHHHHHHHHHHHHHHHHTTTTHHHHHTSCHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 67877-65699999999988998999999874162011000688999999998889987305666666585699999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC
Q ss_conf 347859999999999999960389443259994224333124
Q 000410 794 LCYPSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRR 835 (1553)
Q Consensus 794 l~HPn~wIR~~~~~~i~~~~~~l~~ad~~c~l~P~i~p~l~~ 835 (1553)
+-+++.-||++++.++..+++.+.. .++||+..
T Consensus 674 l~~~~~~vr~~a~~llgdl~~~~~~---------~~~~~l~~ 706 (888)
T d1qbkb_ 674 MQDKMPEVRQSSFALLGDLTKACFQ---------HVKPCIAD 706 (888)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHHCGG---------GTGGGHHH
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHH---------HHHHHHHH
T ss_conf 6799768999999998877875168---------77877999
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.14 E-value=0.00021 Score=42.71 Aligned_cols=114 Identities=20% Similarity=0.220 Sum_probs=59.1
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC---CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 225888843102678012999999999970369920---01342231121024488703678999999976244610189
Q 000410 498 LIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDE---DRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPP 574 (1553)
Q Consensus 498 i~~~~i~s~~R~~~~~~sk~~~l~ll~~~s~~~~de---~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~ 574 (1553)
.++.++...+.+ .....|-.++..+..++.....+ ..++.++|.++.++.|+++.||.+|+.++.++.........
T Consensus 366 ~~~~~i~~~l~~-~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~ 444 (876)
T d1qgra_ 366 HVLPFIKEHIKN-PDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAI 444 (876)
T ss_dssp HHHHHHHHHTTC-SSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTS
T ss_pred HHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 567899986025-1378889999988766643229889899999999999861578608999999889999998131110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98876632323346799999982256878841899999999
Q 000410 575 SDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAY 615 (1553)
Q Consensus 575 ~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~ 615 (1553)
. ..+-+-+++.+.....+ ...|+...+.++..|.+...
T Consensus 445 ~--~~~~~~~~~~l~~~l~~-~~~v~~~~~~~l~~l~~~~~ 482 (876)
T d1qgra_ 445 N--DVYLAPLLQCLIEGLSA-EPRVASNVCWAFSSLAEAAY 482 (876)
T ss_dssp S--TTTHHHHHHHHHHHTTS-CHHHHHHHHHHHHHHHHHHH
T ss_pred H--HHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHH
T ss_conf 1--77766679999988269-87999999987889999988
|
| >d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin beta species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.07 E-value=2.5e-06 Score=56.35 Aligned_cols=134 Identities=11% Similarity=0.031 Sum_probs=86.7
Q ss_pred CHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHH---HHHHHHHHHHCCC
Q ss_conf 9699999983330000013865655321222221356987558999971024134530431145---7488888763279
Q 000410 680 TPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVE---EYLLPYIEQALSD 756 (1553)
Q Consensus 680 ~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~~s~e---~~ilPll~q~l~D 756 (1553)
+..++.+...-+..++..+|. ..-+.+++.+-..+++.+|.-|-+....+..++...+...++ .-++|.+.+.+.|
T Consensus 341 ~~~~~~~a~~~l~~l~~~~~~-~~~~~~~~~i~~~l~~~~~~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~d 419 (876)
T d1qgra_ 341 DWNPCKAAGVCLMLLATCCED-DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKD 419 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHHGG-GGHHHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 313999999999999987366-6535567899986025137888999998876664322988989999999999986157
Q ss_pred CCHHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 82488999999999999819---884578999998531123478599999999999999603
Q 000410 757 ATEAVIVNALDCLAILCKSG---YLRKRILLEMIERAFPLLCYPSQWVRRSVVTFIAASSES 815 (1553)
Q Consensus 757 ~eE~Vv~~~l~~l~~l~~~g---l~~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~ 815 (1553)
+...|...++.++..+++.- ......+-.++..... .+..+.-++..++..+......
T Consensus 420 ~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~v~~~~~~~l~~l~~~ 480 (876)
T d1qgra_ 420 PSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIE-GLSAEPRVASNVCWAFSSLAEA 480 (876)
T ss_dssp SSHHHHHHHHHHHHHHHHHCGGGTSSTTTHHHHHHHHHH-HTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHH
T ss_conf 860899999988999999813111017776667999998-8269879999999878899999
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.05 E-value=1.4e-06 Score=58.25 Aligned_cols=231 Identities=15% Similarity=0.158 Sum_probs=117.0
Q ss_pred CCCEEEECCC-CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2311210244-887036789999999762446101899887663232334679999998225687884189999999999
Q 000410 539 VLPHVIAMLS-DPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGF 617 (1553)
Q Consensus 539 ilPy~~~ll~-d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rf 617 (1553)
++|.++.++. +.++.++..|+++|+.+...-.... ..+...-++|.+..+..++..-|+...+.+|+.||.....+
T Consensus 120 ~i~~Lv~~l~~~~~~~iq~~a~~~L~ni~~~~~~~~---~~~~~~g~i~~l~~lL~s~~~~i~~~a~~~L~nia~~~~~~ 196 (503)
T d1wa5b_ 120 VVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQT---KVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDY 196 (503)
T ss_dssp CHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHH---HHHHHTTCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHH---HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 849999987179999999999999999974988877---99996787478999855997158999999999985411899
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCC
Q ss_conf 99999742013444468999999999842012111460899999999999999998229999969999998333000001
Q 000410 618 LVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSF 697 (1553)
Q Consensus 618 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~F 697 (1553)
-+.. ....+...+..++. +.++.+++....-+..||..
T Consensus 197 r~~l----------------------------------------~~~~~~~~L~~ll~--~~~~~~~~~~~~~l~nl~~~ 234 (503)
T d1wa5b_ 197 RDYV----------------------------------------LQCNAMEPILGLFN--SNKPSLIRTATWTLSNLCRG 234 (503)
T ss_dssp HHHH----------------------------------------HHTTCHHHHHHGGG--SCCHHHHHHHHHHHHHHHCC
T ss_pred HHHH----------------------------------------HHHCCCCCCHHHCC--CCCHHHHHHHHHHHHHHHCC
T ss_conf 9988----------------------------------------74135563012045--68889999999999998468
Q ss_pred CCCCCCC---CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 3865655---3212222213569875589999710241345304---311457488888763279824889999999999
Q 000410 698 FGQRQSN---DFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVG---ERSVEEYLLPYIEQALSDATEAVIVNALDCLAI 771 (1553)
Q Consensus 698 FG~~ktn---d~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG---~~s~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~ 771 (1553)
....... .-+++.+..+|...|+..+......+..++..-. ..-++.-++|.+.+.|..+...|...++.++..
T Consensus 235 ~~~~~~~~~~~~~l~~l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~v~~~al~~l~n 314 (503)
T d1wa5b_ 235 KKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGN 314 (503)
T ss_dssp SSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 74204799999999999987235638999999999875322771111001122331110110257863644567777777
Q ss_pred HHHCCCCCHHHHH--HHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9981988457899--999853112347859999999999999960
Q 000410 772 LCKSGYLRKRILL--EMIERAFPLLCYPSQWVRRSVVTFIAASSE 814 (1553)
Q Consensus 772 l~~~gl~~k~~~~--~~~~~~~~ll~HPn~wIR~~~~~~i~~~~~ 814 (1553)
++...--....+. +++.....++-||+..||..++..++.++.
T Consensus 315 l~~~~~~~~~~~~~~~~l~~l~~ll~~~~~~i~~~~~~~l~nl~~ 359 (503)
T d1wa5b_ 315 IVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNITA 359 (503)
T ss_dssp HTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 877888878763123409999999639978889999877888861
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=97.96 E-value=0.00044 Score=40.42 Aligned_cols=28 Identities=0% Similarity=-0.192 Sum_probs=13.4
Q ss_pred EEEEEEECCCCEEEEEEC-CCCEEEEEEE
Q ss_conf 289998329869999807-9939999933
Q 000410 1190 ALCTMMLRHSAQVVVGAC-DGIIHMFSVD 1217 (1553)
Q Consensus 1190 I~~i~f~~~~~~lvs~s~-DGsI~iwdi~ 1217 (1553)
+.++.|.|+++.++++.. ...|.+|+++
T Consensus 147 ~h~v~~sPdG~~l~v~d~g~d~v~~~~~~ 175 (365)
T d1jofa_ 147 IHGMVFDPTETYLYSADLTANKLWTHRKL 175 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEECCCCCEEEEEECCCCEEEEEECC
T ss_conf 15978889999899820799879999706
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.94 E-value=0.00048 Score=40.18 Aligned_cols=52 Identities=10% Similarity=0.059 Sum_probs=24.3
Q ss_pred CCCEEEEEECCCCCCCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEEC
Q ss_conf 896399996998964430005888766389999699989999927993999968
Q 000410 1266 QNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDL 1319 (1553)
Q Consensus 1266 ~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDl 1319 (1553)
.++.|..++.. +.....+.. .....+..+++++++..+++....+.+.++|.
T Consensus 91 ~~~~i~~~~~~-g~~~~~~~~-~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~ 142 (279)
T d1q7fa_ 91 PTHQIQIYNQY-GQFVRKFGA-TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ 142 (279)
T ss_dssp GGCEEEEECTT-SCEEEEECT-TTCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCCCCCCCCC-CCCEEECCC-CCCCCCCEECCCCCCCEEEEEECCCEEEEECC
T ss_conf 75310000025-630240388-86425420000147847999632632567626
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.90 E-value=0.00058 Score=39.61 Aligned_cols=28 Identities=14% Similarity=0.220 Sum_probs=13.1
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEEC
Q ss_conf 6389999699989999927993999968
Q 000410 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDL 1319 (1553)
Q Consensus 1292 ~Itsi~~sp~g~~LvsGs~dG~I~iWDl 1319 (1553)
.+.+++++++++++++-.....+..++.
T Consensus 99 ~p~~iavd~~g~i~v~d~~~~~~~~~~~ 126 (260)
T d1rwia_ 99 YPEGLAVDTQGAVYVADRGNNRVVKLAA 126 (260)
T ss_dssp SEEEEEECTTCCEEEEEGGGTEEEEECT
T ss_pred ECCCCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 0000024553205750335553211232
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.85 E-value=1.8e-05 Score=50.30 Aligned_cols=230 Identities=13% Similarity=0.096 Sum_probs=116.0
Q ss_pred CCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 34223112102448870367899999997624461018998876632323346799999982256878841899999999
Q 000410 536 LQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAY 615 (1553)
Q Consensus 536 ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~ 615 (1553)
...++|.++.++...++.|+..|+.+|..+...-...-+ .+...-++|.|..+..+++..++..-+.+|..|+....
T Consensus 186 ~~~~l~~l~~ll~~~~~~~~~~a~~~l~~l~~~~~~~~~---~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~ 262 (434)
T d1q1sc_ 186 VEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIE---MVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTD 262 (434)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHH---HHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH---HHHHCCCCHHCCCCCCCCHHHHHHCHHHHHHHHHHHHH
T ss_conf 656999999998524420125677664022012345677---77631542010000234306554021221356776666
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHH
Q ss_conf 99999997420134444689999999998420121114608999999999999999982299999699999983330000
Q 000410 616 GFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLC 695 (1553)
Q Consensus 616 rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc 695 (1553)
++-. ......+.+.+..++. +.+..||+.-+..+..||
T Consensus 263 ~~~~----------------------------------------~~~~~~~~~~l~~ll~--~~~~~v~~~a~~~L~~l~ 300 (434)
T d1q1sc_ 263 EQTQ----------------------------------------KVIDAGALAVFPSLLT--NPKTNIQKEATWTMSNIT 300 (434)
T ss_dssp HHHH----------------------------------------HHHHTTGGGGHHHHTT--CSSHHHHHHHHHHHHHHT
T ss_pred HHHH----------------------------------------HHHHCCCCCHHHHHHC--CCCHHHHHHHHHHHHHHC
T ss_conf 7789----------------------------------------9985256405777613--641466688887886520
Q ss_pred CCCCCCC---CCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHH----HHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 0138656---5532122222135698755899997102413453043114----57488888763279824889999999
Q 000410 696 SFFGQRQ---SNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSV----EEYLLPYIEQALSDATEAVIVNALDC 768 (1553)
Q Consensus 696 ~FFG~~k---tnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~~s~----e~~ilPll~q~l~D~eE~Vv~~~l~~ 768 (1553)
.--...+ .+.-+++.++..|++.++..|..-...+..++..-..... +.-++|.|.+.|.+.++-++..+|++
T Consensus 301 ~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~nl~~~~~~~~~~~l~~~~~i~~L~~ll~~~d~~~~~~~l~~ 380 (434)
T d1q1sc_ 301 AGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDA 380 (434)
T ss_dssp TSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 04504577776654689999877515868899999999999834999999999989769999998659998999999999
Q ss_pred HHHHHHCC--CCCHHHHHHH------HHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999819--8845789999------985311234785999999999999
Q 000410 769 LAILCKSG--YLRKRILLEM------IERAFPLLCYPSQWVRRSVVTFIA 810 (1553)
Q Consensus 769 l~~l~~~g--l~~k~~~~~~------~~~~~~ll~HPn~wIR~~~~~~i~ 810 (1553)
+..+++.+ .-....+.+. +...--|.-|+|.=||+.|..+|-
T Consensus 381 l~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~n~~i~~~a~~il~ 430 (434)
T d1q1sc_ 381 ISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIE 430 (434)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHTTSHHHHHHHHTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999988754774899999998687999999886998999999999999
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=97.78 E-value=0.00087 Score=38.34 Aligned_cols=217 Identities=9% Similarity=0.067 Sum_probs=118.2
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECC--CCEEEEE
Q ss_conf 44574599990799799999399959999489775333222203564179712899983298699998079--9399999
Q 000410 1138 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD--GIIHMFS 1215 (1553)
Q Consensus 1138 H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s~D--GsI~iwd 1215 (1553)
..-.+-.++|.+++.++++-...|.|..|+....+ ..............+++.++++.+++...+ ....++.
T Consensus 38 ~~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~------~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~ 111 (319)
T d2dg1a1 38 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE------IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 111 (319)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC------EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred CCCCCEECEECCCCCEEEEECCCCEEEEEECCCCE------EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEE
T ss_conf 88674707899999999997799999999899995------999994899870389999999999995689731104998
Q ss_pred EEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEEC------CCEEEEEECCCCCCCCEECCCCC
Q ss_conf 331256888643345643421002699848999981279985039999958------96399996998964430005888
Q 000410 1216 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQ------NCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1216 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~------dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
++... +.. ... ............+.+.++ |.+.++... .+.+..++........... .
T Consensus 112 ~~~~~---~~~------~~~-~~~~~~~~~~nd~~~d~~---G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~---~ 175 (319)
T d2dg1a1 112 ATENG---DNL------QDI-IEDLSTAYCIDDMVFDSK---GGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ---N 175 (319)
T ss_dssp ECTTS---CSC------EEE-ECSSSSCCCEEEEEECTT---SCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE---E
T ss_pred ECCCC---CEE------EEE-CCCCCCCCCCCCEEEEEC---CCEEECCCCCCCCCCCCEEEEEECCCCEEEEEEE---C
T ss_conf 73899---636------444-267775558752267730---6532001354002574215788416633578861---2
Q ss_pred CCCEEEEEECCCCCEE-EEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEEC---CCCCCCCCCCCCCEEEEEECCC
Q ss_conf 7663899996999899-99927993999968889643526503568831489645---9999754468998899997699
Q 000410 1290 EGYVSSLVTGPCGNWF-VSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFV---PPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1290 ~g~Itsi~~sp~g~~L-vsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~---p~~~~~~~s~~~~~i~s~s~dg 1365 (1553)
....+.++|+|++++| ++-+..+.|..||+............ ...... ..+..++...+|++.++..+++
T Consensus 176 ~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~------~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g 249 (319)
T d2dg1a1 176 ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGA------TIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG 249 (319)
T ss_dssp ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEE------EEEEECCSSSEEEEEEEBTTCCEEEEEETTT
T ss_pred CCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCEECCCCC------EEEECCCCCCCEEEEEECCCCCEEEEECCCC
T ss_conf 3301000101222127874046891479997699836202463------3331257764103641738999999984899
Q ss_pred EEEEEECCCCCEEEEEEC
Q ss_conf 399999588818999861
Q 000410 1366 EVSLWNAENGSCHQVLRT 1383 (1553)
Q Consensus 1366 ~I~iWDi~tg~~~~~l~~ 1383 (1553)
.|.+||- .|+....+..
T Consensus 250 ~V~~~~p-~G~~l~~i~~ 266 (319)
T d2dg1a1 250 RVLVFNK-RGYPIGQILI 266 (319)
T ss_dssp EEEEECT-TSCEEEEEEC
T ss_pred EEEEECC-CCCEEEEEEC
T ss_conf 8999979-9959889968
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=97.75 E-value=0.00065 Score=39.25 Aligned_cols=132 Identities=13% Similarity=0.018 Sum_probs=74.5
Q ss_pred CEEEEEEEECCC-CEEEEEEEECCCE-EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 569998850257-0999999988955-99999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSR-FFKSILCKHDEGL-VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~-f~~V~~a~~~~~~-vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
.+... .+..|. -..||+....++. +++|..... ....... +.... +.+... .-.+.+++.+..++...|++
T Consensus 12 g~~~~-~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~-~~~~l~~---E~~~l-~~L~~~-gvpvP~v~~~~~~~~~~~~v 84 (255)
T d1nd4a_ 12 GYDWA-QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-ALNELQD---EAARL-SWLATT-GVPCAAVLDVVTEAGRDWLL 84 (255)
T ss_dssp TCEEE-ECSCTTSSCEEEEEECTTSCCEEEEEECSC-TTSCHHH---HHHHH-HHHHTT-TCCBCCEEEEEECSSCEEEE
T ss_pred CCCEE-ECCCCCCCCEEEEEEECCCCEEEEEECCCC-CHHHHHH---HHHHH-HHHHHC-CCCCCCEEEECCCCCCEEEE
T ss_conf 98358-767865477589999389878999958966-7768999---99999-999865-99988613222456615999
Q ss_pred ECCCCC-CHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------
Q ss_conf 035359-9888860999999999999999999999999988---------------------------------------
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--------------------------------------- 143 (1553)
Q Consensus 104 ~e~~~g-sL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~--------------------------------------- 143 (1553)
+++++| ++.+. .+...+ .+.++...|..||+.
T Consensus 85 ~~~i~G~~~~~~-----~~~~~~---~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (255)
T d1nd4a_ 85 LGEVPGQDLLSS-----HLAPAE---KVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGL 156 (255)
T ss_dssp EECCSSEETTTS-----CCCHHH---HHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTC
T ss_pred EEEEECCCCCCC-----CCCHHH---HHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 874413554322-----126899---999999999987368854488755412468899999987541101134011213
Q ss_pred -------------------CCEECCCCCCCEEEECCCCEEEEECCCCC
Q ss_conf -------------------98525788996899139929994137632
Q 000410 144 -------------------GICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 144 -------------------gIiH~DIKpeNILi~~~~~vkL~DFg~~k 172 (1553)
.++|||+.+.|||++....+.++||+.+.
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 157 APAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp CHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEECCCEEEEEECHHCC
T ss_conf 799999999871876579567867888763577379658999853326
|
| >d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Karyopherin alpha species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.75 E-value=4.4e-05 Score=47.54 Aligned_cols=291 Identities=14% Similarity=0.052 Sum_probs=146.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCC---CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 780129999999999703699---20013422311210244887036789999999762446101899887663232334
Q 000410 511 KLPHYRRAAILLLKSSSLFID---DEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPM 587 (1553)
Q Consensus 511 ~~~~sk~~~l~ll~~~s~~~~---de~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~ 587 (1553)
....-+..|+..|-.++..-. +...-.-++|.++.++.+..+.++..|+.+|..+.......+ .....+.++|.
T Consensus 174 ~~~~i~~~a~~~L~nia~~~~~~r~~l~~~~~~~~L~~ll~~~~~~~~~~~~~~l~nl~~~~~~~~---~~~~~~~~l~~ 250 (503)
T d1wa5b_ 174 GSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQP---DWSVVSQALPT 250 (503)
T ss_dssp CCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCC---CHHHHGGGHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCH---HHHHHHHHHHH
T ss_conf 971589999999999854118999988741355630120456888999999999999846874204---79999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CCH---HH--HCCCHHHHHHH
Q ss_conf 6799999982256878841899999999999999974201344446899999999984-201---21--11460899999
Q 000410 588 LSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNE-TSV---QL--QRLNADVQLSQ 661 (1553)
Q Consensus 588 l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~--~~~~~~~~l~~ 661 (1553)
|..+....+.-++...+.+|..|+.......... ...+..+....--. ..+.. ... .. .....+.....
T Consensus 251 l~~~l~~~d~~~~~~~~~~l~~l~~~~~~~~~~~---~~~~~~~~l~~ll~--~~~~~v~~~al~~l~nl~~~~~~~~~~ 325 (503)
T d1wa5b_ 251 LAKLIYSMDTETLVDACWAISYLSDGPQEAIQAV---IDVRIPKRLVELLS--HESTLVQTPALRAVGNIVTGNDLQTQV 325 (503)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHH---HHTTCHHHHHHGGG--CSCHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHH---HHHHHHHHHHHCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9987235638999999999875322771111001---12233111011025--786364456777777787788887876
Q ss_pred H-HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEE
Q ss_conf 9-9999999999822999996999999833300000138---65655321222221356987558999971024134530
Q 000410 662 L-RKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFG---QRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFV 737 (1553)
Q Consensus 662 l-~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG---~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~v 737 (1553)
+ ...+...+..|+. ..++.|+...+.-+..+|..-. ..-.+.-+++.|+..|+..++..|......+..++...
T Consensus 326 ~~~~~~l~~l~~ll~--~~~~~i~~~~~~~l~nl~~~~~~~~~~i~~~~~l~~li~~l~~~~~~v~~~a~~~l~nl~~~~ 403 (503)
T d1wa5b_ 326 VINAGVLPALRLLLS--SPKENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEACWAISNASSGG 403 (503)
T ss_dssp HHHTTHHHHHHHHTT--CSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred HHCCCHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 312340999999963--997888999987788886146988899997146523677602687368999999999997365
Q ss_pred CCC--H----HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH-------HHH------HHHHHHCCCCCCCC
Q ss_conf 431--1----4574888887632798248899999999999981988457-------899------99985311234785
Q 000410 738 GER--S----VEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKR-------ILL------EMIERAFPLLCYPS 798 (1553)
Q Consensus 738 G~~--s----~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~gl~~k~-------~~~------~~~~~~~~ll~HPn 798 (1553)
... . ++.-+++.|..-|...+.-++..+|.+|..+.+.|--.+. .+. +.+...--|.-|||
T Consensus 404 ~~~~~~~~~l~~~~~l~~l~~~L~~~d~~~~~~~L~~l~~ll~~~~~~~~~~~~~~~~~~~~iee~g~~~~i~~Lq~~~~ 483 (503)
T d1wa5b_ 404 LQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNEN 483 (503)
T ss_dssp TTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGGGGCSC
T ss_pred CCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 35489999999897699999986599889999999999999998887756530230189999998877999999876998
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999999
Q 000410 799 QWVRRSVVTFIAA 811 (1553)
Q Consensus 799 ~wIR~~~~~~i~~ 811 (1553)
..|++.|..+|-.
T Consensus 484 ~~i~~~A~~il~~ 496 (503)
T d1wa5b_ 484 DKIYEKAYKIIET 496 (503)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999998
|
| >d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Importin alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.72 E-value=1.1e-05 Score=51.73 Aligned_cols=146 Identities=10% Similarity=0.053 Sum_probs=68.2
Q ss_pred HHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCC---CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECC---CHHH
Q ss_conf 99982299999699999983330000013865---65532122222135698755899997102413453043---1145
Q 000410 670 VQELVMGPKQTPSIRRALLQDIGNLCSFFGQR---QSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGE---RSVE 743 (1553)
Q Consensus 670 ~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~---ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~---~s~e 743 (1553)
+..++. +.++.++...+.-+..||.-.... -.+.-+++.++.++++.++.++.+....+..++..-.. .-++
T Consensus 193 l~~ll~--~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~~~~~~~Lv~ll~~~~~~~~~~al~~l~~l~~~~~~~~~~~~~ 270 (434)
T d1q1sc_ 193 LVRLLH--HNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVID 270 (434)
T ss_dssp HHHHTT--CSCHHHHHHHHHHHHHHTSSCHHHHHHHHTTTCHHHHHHHHTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHH--CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999985--244201256776640220123456777763154201000023430655402122135677666677899985
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH--HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 748888876327982488999999999999819884578999--99853112347859999999999999960389
Q 000410 744 EYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLE--MIERAFPLLCYPSQWVRRSVVTFIAASSESLG 817 (1553)
Q Consensus 744 ~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~gl~~k~~~~~--~~~~~~~ll~HPn~wIR~~~~~~i~~~~~~l~ 817 (1553)
.-+++.+.+-|.++..-|...++.+|..|+...--.+..+.+ ++.....++-+++.=+|..++..+..++..-+
T Consensus 271 ~~~~~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~li~~l~~~~~~v~~~a~~~l~nl~~~~~ 346 (434)
T d1q1sc_ 271 AGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGT 346 (434)
T ss_dssp TTGGGGHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHSSCHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 2564057776136414666888878865200450457777665468999987751586889999999999983499
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=5.7e-05 Score=46.75 Aligned_cols=183 Identities=19% Similarity=0.127 Sum_probs=90.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 78012999999999970369920013422311210244887036789999999762446101899887663232334-67
Q 000410 511 KLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPM-LS 589 (1553)
Q Consensus 511 ~~~~sk~~~l~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~-l~ 589 (1553)
..|..|..|++.|..+.. +..+|.++.++.|+++.||..|+++|.++-..... .+.+++. +.
T Consensus 31 ~~~~vR~~A~~~L~~~~~--------~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~~~~~---------~~~~~~~l~~ 93 (276)
T d1oyza_ 31 HNSLKRISSARVLQLRGG--------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKC---------EDNVFNILNN 93 (276)
T ss_dssp SSHHHHHHHHHHHHHHCC--------HHHHHHHHHHHTCSSHHHHHHHHHHHHHSCCCTTT---------HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCC--------HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC---------CCCHHHHHHH
T ss_conf 999999999999986188--------73999999998099989999999999872022121---------2022999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99999982256878841899999999999999974201344446899999999984201211146089999999999999
Q 000410 590 MLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEV 669 (1553)
Q Consensus 590 ~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 669 (1553)
.+..|++..||...+.+|+.+..... . . ...+.+.
T Consensus 94 ~~l~d~~~~vr~~a~~aL~~~~~~~~-----------------------------------~------~----~~~~~~~ 128 (276)
T d1oyza_ 94 MALNDKSACVRATAIESTAQRCKKNP-----------------------------------I------Y----SPKIVEQ 128 (276)
T ss_dssp HHHHCSCHHHHHHHHHHHHHHHHHCG-----------------------------------G------G----HHHHHHH
T ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCC-----------------------------------H------H----HHHHHHH
T ss_conf 98669976689999999998702462-----------------------------------1------0----1899999
Q ss_pred HHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Q ss_conf 99982299999699999983330000013865655321222221356987558999971024134530431145748888
Q 000410 670 VQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPY 749 (1553)
Q Consensus 670 ~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPl 749 (1553)
+..++. |.++.|+++...-+.. .| +...++.++..+++.++..|......+..+. .. .....|.
T Consensus 129 l~~~~~--d~~~~vr~~a~~~l~~----~~----~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~ 192 (276)
T d1oyza_ 129 SQITAF--DKSTNVRRATAFAISV----IN----DKATIPLLINLLKDPNGDVRNWAAFAININK----YD--NSDIRDC 192 (276)
T ss_dssp HHHHTT--CSCHHHHHHHHHHHHT----C-------CCHHHHHHHHTCSSHHHHHHHHHHHHHHT----CC--CHHHHHH
T ss_pred HHHHHC--CCCHHHHHHHHHHHHH----CC----HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH----CC--CCCCCHH
T ss_conf 999864--7204899999998741----02----3889999887404664011135777877651----02--1113316
Q ss_pred HHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 8763279824889999999999
Q 000410 750 IEQALSDATEAVIVNALDCLAI 771 (1553)
Q Consensus 750 l~q~l~D~eE~Vv~~~l~~l~~ 771 (1553)
+.+.+.|....|...++.++..
T Consensus 193 ~~~~~~~~~~~~~~~~~~al~~ 214 (276)
T d1oyza_ 193 FVEMLQDKNEEVRIEAIIGLSY 214 (276)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCH
T ss_conf 6664110000123332001000
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=0.0022 Score=35.49 Aligned_cols=213 Identities=11% Similarity=0.016 Sum_probs=108.2
Q ss_pred CCEEEECCCCCCCEEEEEECCCCCEEEEEECC-CC--EEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEE
Q ss_conf 53754502244574599990799799999399-95--9999489775333222203564179712899983298699998
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDD-ST--VKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVG 1205 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~i~~spd~~~laSgS~D-Gt--VkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~ 1205 (1553)
|.-...+..+.+.+..-+|||||+.+|-.+.. +. +.+.+...+. ......+.+...+..|+|++..++..
T Consensus 28 G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~spdg~~i~~~ 100 (269)
T d2hqsa1 28 GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA-------VRQVASFPRHNGAPAFSPDGSKLAFA 100 (269)
T ss_dssp SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-------EEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEECCCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCC-------EEEEEEEECCCCCCEECCCCCEEEEE
T ss_conf 99767986589842603887899989999815267513443113675-------06776420245430244889864676
Q ss_pred E-CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCC--EEEEEECCCCCCCC
Q ss_conf 0-79939999933125688864334564342100269984899998127998503999995896--39999699896443
Q 000410 1206 A-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNC--GIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1206 s-~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg--~I~iwDlrt~~~~~ 1282 (1553)
. .+|...++...... .... .............+..+. ...+++...++ .|...++.......
T Consensus 101 ~~~~~~~~~~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~i~~~~~~~~~~~~ 165 (269)
T d2hqsa1 101 LSKTGSLNLYVMDLAS------------GQIR-QVTDGRSNNTEPTWFPDS--QNLAFTSDQAGRPQVYKVNINGGAPQR 165 (269)
T ss_dssp ECTTSSCEEEEEETTT------------CCEE-ECCCCSSCEEEEEECTTS--SEEEEEECTTSSCEEEEEETTSSCCEE
T ss_pred EECCCCCCEEECCCCC------------CCCE-EEEECCCCCCCCCCCCCC--CCCEECCCCCCCCEEEEEECCCCCCEE
T ss_conf 4027864100002221------------2200-001014421145434554--433000012687438654213310001
Q ss_pred EECCCCCCCCEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf 0005888766389999699989999927-993999968889643526503568831489645999975446899889999
Q 000410 1283 TLKAIPEEGYVSSLVTGPCGNWFVSGSS-RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1283 ~l~~~~h~g~Itsi~~sp~g~~LvsGs~-dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~ 1361 (1553)
.. . ..+......++|++.+++..+. .|...+|............. .........| +|+ |++|+-.
T Consensus 166 ~~-~--~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~p~~-SPD---------G~~i~f~ 231 (269)
T d2hqsa1 166 IT-W--EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS-STFLDETPSL-APN---------GTMVIYS 231 (269)
T ss_dssp CC-C--SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC-CSSSCEEEEE-CTT---------SSEEEEE
T ss_pred EE-C--CCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEE-CCCCCCCEEE-CCC---------CCEEEEE
T ss_conf 00-0--1222234322345430577860588012567603564405850-6865445589-899---------9999999
Q ss_pred EC---CCEEEEEECCCCCE
Q ss_conf 76---99399999588818
Q 000410 1362 AG---CNEVSLWNAENGSC 1377 (1553)
Q Consensus 1362 s~---dg~I~iWDi~tg~~ 1377 (1553)
+. ...+.+|++..+..
T Consensus 232 s~~~~~~~l~~~~~dg~~~ 250 (269)
T d2hqsa1 232 SSQGMGSVLNLVSTDGRFK 250 (269)
T ss_dssp EEETTEEEEEEEETTSCCE
T ss_pred ECCCCCCEEEEEECCCCCE
T ss_conf 8179984799999999977
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=97.45 E-value=0.00018 Score=43.20 Aligned_cols=19 Identities=21% Similarity=0.326 Sum_probs=9.5
Q ss_pred EEEECCCCCCCHHHHHHHH
Q ss_conf 1210244887036789999
Q 000410 542 HVIAMLSDPAAIVRCAALE 560 (1553)
Q Consensus 542 y~~~ll~d~~~~Vr~~al~ 560 (1553)
-|..|++|+.+.||..|.+
T Consensus 70 ~L~~Ll~D~d~~VR~~AA~ 88 (233)
T d1lrva_ 70 ALTPLIRDSDEVVRRAVAY 88 (233)
T ss_dssp GGGGGTTCSSHHHHHHHHT
T ss_pred HHHHHHCCCCHHHHHHHHH
T ss_conf 9998826989899999999
|
| >d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Leucine-rich repeat variant domain: Leucine-rich repeat variant species: Azotobacter vinelandii [TaxId: 354]
Probab=97.40 E-value=0.00021 Score=42.68 Aligned_cols=139 Identities=19% Similarity=0.213 Sum_probs=84.7
Q ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 31121024488703678999999976244610189988766323233467999999822568788418999999999999
Q 000410 540 LPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLV 619 (1553)
Q Consensus 540 lPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~ 619 (1553)
.+++..|+.|++..||..+...+ + -+.|..++.|++..||.+.|++++.
T Consensus 92 ~~~L~~L~~D~d~~VR~~aa~~l----------~-----------~~~L~~Ll~D~d~~VR~~aa~~~~~---------- 140 (233)
T d1lrva_ 92 REQLSALMFDEDREVRITVADRL----------P-----------LEQLEQMAADRDYLVRAYVVQRIPP---------- 140 (233)
T ss_dssp SGGGGGTTTCSCHHHHHHHHHHS----------C-----------TGGGGGGTTCSSHHHHHHHHHHSCG----------
T ss_pred HHHHHHHHCCCCHHHHHHHHHCC----------C-----------HHHHHHHHCCCCHHHHHHHHHCCCH----------
T ss_conf 99999984499746899887426----------8-----------8999998559987899999861106----------
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHH--HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCC
Q ss_conf 9997420134444689999999998420121114608999--99999999999998229999969999998333000001
Q 000410 620 HSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQL--SQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSF 697 (1553)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~F 697 (1553)
..+..... + . +.+. ...+..-...+..++. |.++.||++...++.+
T Consensus 141 --------~~L~~L~~---------D--~-------d~~VR~~aA~~~~~~~L~~l~~--D~d~~VR~~aa~~L~~---- 188 (233)
T d1lrva_ 141 --------GRLFRFMR---------D--E-------DRQVRKLVAKRLPEESLGLMTQ--DPEPEVRRIVASRLRG---- 188 (233)
T ss_dssp --------GGGGGTTT---------C--S-------CHHHHHHHHHHSCGGGGGGSTT--CSSHHHHHHHHHHCCG----
T ss_pred --------HHHHHHHC---------C--C-------CHHHHHHHHHHCCHHHHHHHCC--CCCHHHHHHHHHHCCC----
T ss_conf --------68998834---------8--9-------7899999998459999998705--9988999999984584----
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 38656553212222213569875589999710241345304311457488888763279824889999999
Q 000410 698 FGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDC 768 (1553)
Q Consensus 698 FG~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~eE~Vv~~~l~~ 768 (1553)
+.|+.+++|+||..|.+--+.+. |-+++.|.|+++.|-..|.+.
T Consensus 189 -----------~~L~~l~~D~d~~VR~aaae~~~----------------~~ll~~L~D~d~~VR~aA~~~ 232 (233)
T d1lrva_ 189 -----------DDLLELLHDPDWTVRLAAVEHAS----------------LEALRELDEPDPEVRLAIAGR 232 (233)
T ss_dssp -----------GGGGGGGGCSSHHHHHHHHHHSC----------------HHHHHHCCCCCHHHHHHHHCC
T ss_pred -----------HHHHHHHHCCCHHHHHHHHHHCC----------------HHHHHHHCCCCHHHHHHHHHH
T ss_conf -----------99999873998899999997063----------------999998679999999999970
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=97.36 E-value=0.0031 Score=34.44 Aligned_cols=202 Identities=11% Similarity=0.050 Sum_probs=96.1
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCC---CCEEEEEEECCCCEEEEEECC---------
Q ss_conf 74599990799799999399959999489775333222203564179---712899983298699998079---------
Q 000410 1141 AVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEG---SRALCTMMLRHSAQVVVGACD--------- 1208 (1553)
Q Consensus 1141 ~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~---~~I~~i~f~~~~~~lvs~s~D--------- 1208 (1553)
.-+.++|.+++..++.+...+.+...|........ ......+ ....++.+.++|+..++-...
T Consensus 72 ~P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~-----~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~ 146 (314)
T d1pjxa_ 72 IPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEI-----AKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp CEEEEEECSSSSEEEEEETTTEEEEEETTSCEEEC-----CSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCEEEEEECCCCEEEEEECCCEEEEEECCCCEEEE-----EECCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 53069990799989999779839999477747999-----7334324545787278988899899914866754320110
Q ss_pred ----CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCC-C-EEEEEEECCCEEEEEECCCCCCCC
Q ss_conf ----9399999331256888643345643421002699848999981279985-0-399999589639999699896443
Q 000410 1209 ----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA-S-HMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1209 ----GsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s-~-~~L~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
..-.+|.++.. + ....... .-...+.++|++++.. . .++++-+..+.|..||+.....+.
T Consensus 147 ~~~~~~G~v~~~~~d----g---------~~~~~~~-~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~ 212 (314)
T d1pjxa_ 147 SMQEKFGSIYCFTTD----G---------QMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE 212 (314)
T ss_dssp TTSSSCEEEEEECTT----S---------CEEEEEE-EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE
T ss_pred EECCCCCEEEEEEEC----C---------CEEEEEC-CCCEEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCCCC
T ss_conf 002688438999525----7---------4037507-8532213699788776303799986024311776116765430
Q ss_pred ------EECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf ------00058887663899996999899999279939999688896435265035688314896459999754468998
Q 000410 1283 ------TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARP 1356 (1553)
Q Consensus 1283 ------~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~ 1356 (1553)
.+.. ...+....++++.+|+..++....|.|..||...+..+..+..+. .....+++ .|+ +.
T Consensus 213 ~~~~~~~~~~-~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~-~~~t~~af-g~d---------~~ 280 (314)
T d1pjxa_ 213 NKKVWGHIPG-THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPF-EKPSNLHF-KPQ---------TK 280 (314)
T ss_dssp EEEEEEECCC-CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSS-SCEEEEEE-CTT---------SS
T ss_pred EEEEEEECCC-CCCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCEEEEEEECCC-CCEEEEEE-ECC---------CC
T ss_conf 1568997133-566641025783478579998279999999699997999997999-98789999-289---------89
Q ss_pred EEEEE-ECCCEEEEEECC
Q ss_conf 89999-769939999958
Q 000410 1357 LIYVA-AGCNEVSLWNAE 1373 (1553)
Q Consensus 1357 ~i~s~-s~dg~I~iWDi~ 1373 (1553)
.+++. +.++.|...++.
T Consensus 281 ~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 281 TIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEETTTTEEEEEECS
T ss_pred EEEEEECCCCCEEEEECC
T ss_conf 999998789919999789
|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Exportin Cse1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.22 E-value=0.00091 Score=38.19 Aligned_cols=273 Identities=12% Similarity=0.085 Sum_probs=137.4
Q ss_pred HHHHHHHHHCCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 2588884310267--80129999999999703699200134223112102448870367899999997624461018998
Q 000410 499 IASLLCSCVRNVK--LPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSD 576 (1553)
Q Consensus 499 ~~~~i~s~~R~~~--~~~sk~~~l~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~ 576 (1553)
+...+...+++.. .+-.|.+++.++-.+++....+. +..++|+++.++.|+...||..|..++..++..........
T Consensus 456 l~~~v~~~l~~~~~~~~~lr~~~~~~i~~~~~~~~~~~-~~~~~~~l~~~L~~~~~~V~~~a~~al~~~~~~~~~~~~~~ 534 (959)
T d1wa5c_ 456 FTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKAQ-LIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSPA 534 (959)
T ss_dssp HHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGSCHHH-HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTCBSCSSSCC
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 99999999736887509999999999987774126788-99999999987279961589999999999998660033200
Q ss_pred CCCCCCCCCCCCCCCCC-------C--CCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 87663232334679999-------9--9822---5687884189999999999999997420134444689999999998
Q 000410 577 AKIFPEYILPMLSMLPD-------D--PEES---VRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSN 644 (1553)
Q Consensus 577 ~~iF~eYilP~l~~l~~-------d--~~~~---vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (1553)
..+-.|.+.|-+..+.. + .... ++...-.+|..+ ..+|-+..
T Consensus 535 ~~~~~~~l~p~l~~ll~~L~~~l~~~~~~~~~~~~~~~ll~~l~~i---i~~~~~~~----------------------- 588 (959)
T d1wa5c_ 535 FIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRV---LQTSEDSI----------------------- 588 (959)
T ss_dssp BSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHH---HHHHTTTT-----------------------
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH---HHHHHHHH-----------------------
T ss_conf 1032887775699999999999986122025678899999999999---99879888-----------------------
Q ss_pred CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCC---CCCCCCCCCCCCCCHH
Q ss_conf 4201211146089999999999999999822999996999999833300000138656553---2122222135698755
Q 000410 645 ETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSND---FLLPILPAFLNDRDEQ 721 (1553)
Q Consensus 645 ~~~~~~~~~~~~~~l~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd---~iL~hlit~LNd~d~~ 721 (1553)
. . ....+-..+...+..+..+ ..++.....+++-|..|..+.|.+.-.. .++|-+...++.....
T Consensus 589 ------~--~---~~~~i~~~l~~~~~~~~~~-~~~~~~~~~~~e~l~~l~~~~~~~~~~~l~~~l~p~i~~~~~~~~~~ 656 (959)
T d1wa5c_ 589 ------Q--P---LFPQLLAQFIEIVTIMAKN-PSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQE 656 (959)
T ss_dssp ------G--G---GHHHHHHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHTTCTT
T ss_pred ------H--H---HHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf ------8--8---9999999999999998568-42367899999999999984281359999999999999998433164
Q ss_pred HHHH---HHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC---CCCCHHHHHHHHHHHCCCCC
Q ss_conf 8999---97102413453043114574888887632798248899999999999981---98845789999985311234
Q 000410 722 LRAV---FYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKS---GYLRKRILLEMIERAFPLLC 795 (1553)
Q Consensus 722 LR~a---ff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~---gl~~k~~~~~~~~~~~~ll~ 795 (1553)
+... ++..+...+..+.+.- -+++-|++...+.+..+. +..++..+..++.. .+.+-..++.+ ..-++.
T Consensus 657 ~~~~~~~l~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~l~~---~~~~l~ 731 (959)
T d1wa5c_ 657 FIPYVFQIIAFVVEQSATIPESI-KPLAQPLLAPNVWELKGN-IPAVTRLLKSFIKTDSSIFPDLVPVLGI---FQRLIA 731 (959)
T ss_dssp THHHHHHHHHHHHHHCSSCCTTT-GGGHHHHTSGGGGCCTTT-HHHHHHHHHHHHHHHGGGCSCSHHHHHH---HHHHHT
T ss_pred HHHHHHHHHHHHHHHCCCCCHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHCHHHHCCHHHHHHH---HHHHHC
T ss_conf 78999999999987477866889-999999863788877611-8999999999997287864462879999---999877
Q ss_pred CCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 7859999999999999960389
Q 000410 796 YPSQWVRRSVVTFIAASSESLG 817 (1553)
Q Consensus 796 HPn~wIR~~~~~~i~~~~~~l~ 817 (1553)
++.. ++.+..++..+...++
T Consensus 732 ~~~~--~~~~~~ll~~ii~~~~ 751 (959)
T d1wa5c_ 732 SKAY--EVHGFDLLEHIMLLID 751 (959)
T ss_dssp CTTT--HHHHHHHHHHHHHHSC
T ss_pred CCCC--HHHHHHHHHHHHHHCC
T ss_conf 9830--6899999999999785
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.87 E-value=0.0088 Score=31.22 Aligned_cols=15 Identities=20% Similarity=-0.024 Sum_probs=6.5
Q ss_pred EEEECCCCCEEEEEE
Q ss_conf 999907997999993
Q 000410 1144 EIAISHDHSFFVSAS 1158 (1553)
Q Consensus 1144 ~i~~spd~~~laSgS 1158 (1553)
++-|||||++||...
T Consensus 177 a~~WSPDgk~iaf~~ 191 (465)
T d1xfda1 177 AHWWSPDGTRLAYAA 191 (465)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEE
T ss_conf 489779898689999
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=96.79 E-value=0.0012 Score=37.38 Aligned_cols=77 Identities=12% Similarity=0.091 Sum_probs=42.3
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECC----CCC--CCHHHHHHHHHHHHHHHHCC-C-CC-CEEEEEEEE
Q ss_conf 56999885025709999999889--55999999516----997--47899999999999999618-9-99-754887999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKR----GDY--IDLREYERRLFHIRETFRSI-D-HP-HVWAFQFWQ 94 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~----~~~--~~~~~~~~~l~~e~~~l~~l-~-hp-nIl~~~~~~ 94 (1553)
..+ .+.+|.|....||++.... +.+++|.-... ++. .... +...|.+.++.+ . .| .+.+.+.+
T Consensus 28 ~l~-~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~----R~~~E~~~L~~~~~~~p~~vP~v~~~- 101 (392)
T d2pula1 28 TLT-CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTID----RARIESSALIRQGEHVPHLVPRVFYS- 101 (392)
T ss_dssp CCE-EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTT----HHHHHHHHHHHHHTTCGGGSCCEEEE-
T ss_pred CEE-EEEECCCCEEEEEEEEECCCCEEEEEECCCCHHCCCCCCCCCCHH----HHHHHHHHHHHHHHHCCCCCCEEEEE-
T ss_conf 736-998079852768999957998489996177130346777888778----99999999998650579885528998-
Q ss_pred EECCEEEEEECCCCC
Q ss_conf 808879999035359
Q 000410 95 ETDKAAYLLRQYFFN 109 (1553)
Q Consensus 95 ~~~~~~~LV~e~~~g 109 (1553)
+....++|||++.+
T Consensus 102 -d~~~~~lvmE~L~~ 115 (392)
T d2pula1 102 -DTEMAVTVMEDLSH 115 (392)
T ss_dssp -ETTTTEEEECCCTT
T ss_pred -CCCCCEEEEECCCC
T ss_conf -59887798713577
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.71 E-value=0.0013 Score=37.19 Aligned_cols=308 Identities=15% Similarity=0.099 Sum_probs=147.0
Q ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC----CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 58888431026780129999999999703699200134----22311210244887036789999999762446101899
Q 000410 500 ASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQ----RVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPS 575 (1553)
Q Consensus 500 ~~~i~s~~R~~~~~~sk~~~l~ll~~~s~~~~de~~ld----rilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~ 575 (1553)
+..+...+++...+..+..|+..|..++. +++.+-. -.+|-++.++.++++.|+..|+++|..+...-. .
T Consensus 61 v~~l~~~L~~~~~~~~~~~a~~~L~~l~~--~~~~~~~i~~~g~i~~Li~lL~~~~~~v~~~a~~aL~~l~~~~~----~ 134 (529)
T d1jdha_ 61 VSAIVRTMQNTNDVETARCTAGTLHNLSH--HREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQE----G 134 (529)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHTT--SHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCT----T
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHC--CCHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCC----H
T ss_conf 99999998479999999999999999958--91669999987989999998579798999999999998651320----1
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCC
Q ss_conf 88766-32323346799999982256878841899999999999999974201344446899999999984201211146
Q 000410 576 DAKIF-PEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLN 654 (1553)
Q Consensus 576 ~~~iF-~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (1553)
....| -.-.+|.|..+..+++.-++..-|.+|..|+....-.-..... .|...... .-....+
T Consensus 135 ~~~~~~~~g~i~~Lv~lL~~~~~~~~~~a~~~L~~l~~~~~~~~~~~~~---~~~~~~L~-------------~ll~~~~ 198 (529)
T d1jdha_ 135 AKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILA---SGGPQALV-------------NIMRTYT 198 (529)
T ss_dssp HHHHHHHHTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHH---TTHHHHHH-------------HHHHHCC
T ss_pred HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---CCCCHHHH-------------HHHHHHH
T ss_conf 1367876588148999887057688888899998876300478888876---05636899-------------9998610
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEE
Q ss_conf 08999999999999999982299999699999983330000013865655321222221356987558999971024134
Q 000410 655 ADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVC 734 (1553)
Q Consensus 655 ~~~~l~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~ 734 (1553)
...++......+..|.. +...++.+.+. -.++.|..+|.+.+..++..-...+..++
T Consensus 199 ----~~~~~~~~~~~l~~ls~----~~~~~~~~~~~---------------g~~~~L~~ll~~~~~~~~~~a~~~l~~ls 255 (529)
T d1jdha_ 199 ----YEKLLWTTSRVLKVLSV----CSSNKPAIVEA---------------GGMQALGLHLTDPSQRLVQNCLWTLRNLS 255 (529)
T ss_dssp ----CHHHHHHHHHHHHHHTT----STTHHHHHHHT---------------THHHHHHTTTTSSCHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHC----CCCCCCHHHHH---------------HHHHHHHHHHCCCCHHHHHHHHHHHHHCC
T ss_conf ----48999999998751101----33233045654---------------33346999862540155530156777504
Q ss_pred EEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHH--HHHHHHCCCCC--CCCHHHHHHHHHHHH
Q ss_conf 53043114574888887632798248899999999999981988457899--99985311234--785999999999999
Q 000410 735 FFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILL--EMIERAFPLLC--YPSQWVRRSVVTFIA 810 (1553)
Q Consensus 735 ~~vG~~s~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~gl~~k~~~~--~~~~~~~~ll~--HPn~wIR~~~~~~i~ 810 (1553)
.--.......-++|.|.+-|.+..+-|...++.+|..|+.-.-=.+..+. +.+.....++. .++.=++..++..+.
T Consensus 256 ~~~~~~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l~~~~~~~~~~i~~~~~i~~Li~~l~~~~~~~~~~~~a~~aL~ 335 (529)
T d1jdha_ 256 DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALR 335 (529)
T ss_dssp TTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 32110256640101445412454288999999988750122037888888750078999999840011137889998850
Q ss_pred HHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 99603894432599942243331248776689988981069998499999999
Q 000410 811 ASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVL 863 (1553)
Q Consensus 811 ~~~~~l~~ad~~c~l~P~i~p~l~~~~~~~~~~~~ll~~l~~pisr~v~~~~~ 863 (1553)
.++......+. .+..+........|+..+++|-.+.+-..++
T Consensus 336 ~l~~~~~~~~~-----------~~~~i~~~~~l~~L~~ll~~~~~~~~~~~~~ 377 (529)
T d1jdha_ 336 HLTSRHQEAEM-----------AQNAVRLHYGLPVVVKLLHPPSHWPLIKATV 377 (529)
T ss_dssp HHTSSSTTHHH-----------HHHHHHHTTCHHHHHHTTSTTCCHHHHHHHH
T ss_pred CCCCHHHCCHH-----------HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf 02200000003-----------5666776456124789871531278999999
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.61 E-value=0.013 Score=29.94 Aligned_cols=143 Identities=17% Similarity=0.119 Sum_probs=72.9
Q ss_pred CEEEEEEEECCCCEEEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHC--CCCCCEEEEE---EEEEECCEE
Q ss_conf 56999885025709999999889559999995169974789999999999999961--8999754887---999808879
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRS--IDHPHVWAFQ---FWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~--l~hpnIl~~~---~~~~~~~~~ 100 (1553)
...-.+.+..|.--..|+....++.+++|++.+........ +...+. ..|.. +..|..+... .+.......
T Consensus 19 ~~~~~~~i~~G~~N~ny~v~t~~g~yVLri~~~~~~~~~l~-~~~~~l---~~L~~~g~pvp~pi~~~~g~~~~~~~~~~ 94 (316)
T d2ppqa1 19 SLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKRVEKNDLP-FFLGLM---QHLAAKGLSCPLPLPRKDGELLGELSGRP 94 (316)
T ss_dssp CEEEEEEECC---EEEEEEEESSCCEEEEEECC---CCHHH-HHHHHH---HHHHHTTCCCCCBCCBTTCCSCEEETTEE
T ss_pred CCEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHH-HHHHHH---HHHHHCCCCCCCCCEECCCCCCEEEECCC
T ss_conf 85685237888526738999789728999807899988999-999998---75430255545564104897621341255
Q ss_pred EEEECCCCCC-H--------------HHHH---CC-----CC-CCCH------------------HHHHHHHHHHHHHHH
Q ss_conf 9990353599-8--------------8886---09-----99-9999------------------999999999999999
Q 000410 101 YLLRQYFFNS-L--------------RDRL---ST-----PP-FLSL------------------VEKKWLAFQLLLAVK 138 (1553)
Q Consensus 101 ~LV~e~~~gs-L--------------~d~l---~~-----~~-~l~~------------------~~~~~i~~Qil~aL~ 138 (1553)
..++.++.|. . ..++ .. .+ .... ......+..+...+.
T Consensus 95 ~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (316)
T d2ppqa1 95 AALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLA 174 (316)
T ss_dssp EEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 02453114655333204678888899876454443202453101110120024567777653114127999999987642
Q ss_pred HHH----HCCCEECCCCCCCEEEECCCCEEEEECCCCC
Q ss_conf 999----8898525788996899139929994137632
Q 000410 139 QCH----EKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 139 ~lH----~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k 172 (1553)
..+ ..|+||||+.++|++++.+...-++||+.+.
T Consensus 175 ~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~ 212 (316)
T d2ppqa1 175 AHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 212 (316)
T ss_dssp HHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCC
T ss_conf 04855454503337863656402045412674222123
|
| >d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: Hypothetical protein YibA species: Escherichia coli [TaxId: 562]
Probab=96.47 E-value=0.016 Score=29.43 Aligned_cols=193 Identities=12% Similarity=0.066 Sum_probs=127.5
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 12102448870367899999997624461018998876632323346799999982256878841899999999999999
Q 000410 542 HVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHS 621 (1553)
Q Consensus 542 y~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~ 621 (1553)
-|..+|+|+++.||..|+++|...= .+=.+|.|..++.|++..||..-+..|+.+..
T Consensus 23 ~L~~~L~d~~~~vR~~A~~~L~~~~--------------~~~~~~~l~~~l~d~~~~vr~~a~~aL~~l~~--------- 79 (276)
T d1oyza_ 23 ELFRLLDDHNSLKRISSARVLQLRG--------------GQDAVRLAIEFCSDKNYIRRDIGAFILGQIKI--------- 79 (276)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHC--------------CHHHHHHHHHHHTCSSHHHHHHHHHHHHHSCC---------
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHC--------------CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC---------
T ss_conf 9998846999999999999998618--------------87399999999809998999999999987202---------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHCCCCCC
Q ss_conf 97420134444689999999998420121114608999999999999999982299999699999983330000013865
Q 000410 622 IRLSEAGVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQR 701 (1553)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ 701 (1553)
. . . ..+..+..+ ...++. |.++.||.+-+..+..+|. +..
T Consensus 80 --------------------~--~--~-----~~~~~~~~l-------~~~~l~--d~~~~vr~~a~~aL~~~~~--~~~ 119 (276)
T d1oyza_ 80 --------------------C--K--K-----CEDNVFNIL-------NNMALN--DKSACVRATAIESTAQRCK--KNP 119 (276)
T ss_dssp --------------------C--T--T-----THHHHHHHH-------HHHHHH--CSCHHHHHHHHHHHHHHHH--HCG
T ss_pred --------------------C--C--C-----CCCCHHHHH-------HHHHHC--CCCHHHHHHHHHHHHHHCC--CCC
T ss_conf --------------------2--1--2-----120229999-------999866--9976689999999998702--462
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 65532122222135698755899997102413453043114574888887632798248899999999999981988457
Q 000410 702 QSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKR 781 (1553)
Q Consensus 702 ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~~~gl~~k~ 781 (1553)
.....+++.+..-++|.++..|.+-...+..+. ....+|.+...+.+..+.|...+..++..+... .
T Consensus 120 ~~~~~~~~~l~~~~~d~~~~vr~~a~~~l~~~~--------~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~---~-- 186 (276)
T d1oyza_ 120 IYSPKIVEQSQITAFDKSTNVRRATAFAISVIN--------DKATIPLLINLLKDPNGDVRNWAAFAININKYD---N-- 186 (276)
T ss_dssp GGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC-----------CCHHHHHHHHTCSSHHHHHHHHHHHHHHTCC---C--
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--------HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC---C--
T ss_conf 101899999999864720489999999874102--------388999988740466401113577787765102---1--
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 8999998531123478599999999999999
Q 000410 782 ILLEMIERAFPLLCYPSQWVRRSVVTFIAAS 812 (1553)
Q Consensus 782 ~~~~~~~~~~~ll~HPn~wIR~~~~~~i~~~ 812 (1553)
..........+.+++.++|..++.-...+
T Consensus 187 --~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 215 (276)
T d1oyza_ 187 --SDIRDCFVEMLQDKNEEVRIEAIIGLSYR 215 (276)
T ss_dssp --HHHHHHHHHHTTCSCHHHHHHHHHHHHHT
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_conf --11331666641100001233320010000
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.35 E-value=0.00044 Score=40.41 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=72.9
Q ss_pred CCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCC
Q ss_conf 99969999998333000001386565532122222135698755899997102413453043114574888887632798
Q 000410 678 KQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDA 757 (1553)
Q Consensus 678 d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~ 757 (1553)
|.++.||++-+..+.. +|. + .++-|+..|+|.||..|..=...+..+ . ..-.+|.|++.|.|+
T Consensus 3 D~~~~VR~~A~~aL~~----~~~-~----~~~~L~~~l~d~~~~vR~~a~~~L~~~-------~-~~~~~~~L~~~l~d~ 65 (111)
T d1te4a_ 3 DENKWVRRDVSTALSR----MGD-E----AFEPLLESLSNEDWRIRGAAAWIIGNF-------Q-DERAVEPLIKLLEDD 65 (111)
T ss_dssp SSCCCSSSSCCSSTTS----CSS-T----THHHHHHGGGCSCHHHHHHHHHHHGGG-------C-SHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHH----HCH-H----HHHHHHHHHCCCCHHHHHHHHHHHHHC-------C-HHHHHHHHHHHHCCC
T ss_conf 9599999999999987----387-8----999999997499878999999998761-------0-123279987330230
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 2488999999999999819884578999998531123478599999999999
Q 000410 758 TEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCYPSQWVRRSVVTFI 809 (1553)
Q Consensus 758 eE~Vv~~~l~~l~~l~~~gl~~k~~~~~~~~~~~~ll~HPn~wIR~~~~~~i 809 (1553)
++.|-..++.+|..+- .. +.+.....++-+|+.++|++++.-+
T Consensus 66 ~~~VR~~a~~aL~~i~------~~---~~~~~L~~ll~d~~~~vr~~A~~aL 108 (111)
T d1te4a_ 66 SGFVRSGAARSLEQIG------GE---RVRAAMEKLAETGTGFARKVAVNYL 108 (111)
T ss_dssp CTHHHHHHHHHHHHHC------SH---HHHHHHHHHTTSCCTHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHHHC------CC---CHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 3379999999999867------61---1499999988299899999999998
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.06 E-value=0.0075 Score=31.68 Aligned_cols=72 Identities=19% Similarity=0.176 Sum_probs=41.3
Q ss_pred CEEEEEEEECCCCEEEEEEEECC---------CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC-EEEEEEEEE
Q ss_conf 56999885025709999999889---------55999999516997478999999999999996189997-548879998
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH-VWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~---------~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpn-Il~~~~~~~ 95 (1553)
++. .+.|+.|-.-.+|++...+ ..++++++-... ..... .+|..+++.+...+ ..+++.++.
T Consensus 44 ~l~-v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~---~~idr----~~E~~i~~~ls~~gl~Pkll~~~~ 115 (395)
T d1nw1a_ 44 HLR-ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE---TESHL----VAESVIFTLLSERHLGPKLYGIFS 115 (395)
T ss_dssp GEE-EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC---CHHHH----HHHHHHHHHHHHTTSSSCEEEEET
T ss_pred CEE-EEECCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCC---HHHHH----HHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 169-9991785334348999688775445789817999659961---16589----999999999975799980899818
Q ss_pred ECCEEEEEECCCCC
Q ss_conf 08879999035359
Q 000410 96 TDKAAYLLRQYFFN 109 (1553)
Q Consensus 96 ~~~~~~LV~e~~~g 109 (1553)
. .+|+||++|
T Consensus 116 ~----g~I~efi~g 125 (395)
T d1nw1a_ 116 G----GRLEEYIPS 125 (395)
T ss_dssp T----EEEECCCCE
T ss_pred C----CEEEEEECC
T ss_conf 9----569997345
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=95.93 E-value=0.03 Score=27.44 Aligned_cols=187 Identities=11% Similarity=0.043 Sum_probs=105.2
Q ss_pred CCCCCC-EEEECCCCCCCEEEEEECCCCCEEEEEECC--CCEEEEECCCCCCCCCCCCCEEEE--CCCCCEEEEEEECCC
Q ss_conf 555753-754502244574599990799799999399--959999489775333222203564--179712899983298
Q 000410 1125 WRPRGI-LVAHLQEHCSAVNEIAISHDHSFFVSASDD--STVKVWDSRKLEKDISFRSRLTYH--LEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1125 W~p~G~-lv~~l~~H~~~V~~i~~spd~~~laSgS~D--GtVkIWD~~~~~~~~~~~~~~t~~--~h~~~I~~i~f~~~~ 1199 (1553)
|+|.|. ....+.+.....+.+++++|+.++++...+ ....++........ ...... ........+++.++|
T Consensus 66 i~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~nd~~~d~~G 141 (319)
T d2dg1a1 66 INPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN----LQDIIEDLSTAYCIDDMVFDSKG 141 (319)
T ss_dssp ECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS----CEEEECSSSSCCCEEEEEECTTS
T ss_pred EECCCCEEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCE----EEEECCCCCCCCCCCCEEEEECC
T ss_conf 98999959999948998703899999999999956897311049987389963----64442677755587522677306
Q ss_pred CEEEEEECC----CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCE-EEEEEECCCEEEEEE
Q ss_conf 699998079----939999933125688864334564342100269984899998127998503-999995896399996
Q 000410 1200 AQVVVGACD----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASH-MFMYSTQNCGIHLWD 1274 (1553)
Q Consensus 1200 ~~lvs~s~D----GsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~-~L~~~s~dg~I~iwD 1274 (1553)
+..++.... ..-.+|.++... ..+.... ........++|+++ ++ +.++-+..+.|..||
T Consensus 142 ~l~vtd~~~~~~~~~g~v~~~~~dg------------~~~~~~~-~~~~~pnGia~s~d---g~~lyvad~~~~~I~~~d 205 (319)
T d2dg1a1 142 GFYFTDFRGYSTNPLGGVYYVSPDF------------RTVTPII-QNISVANGIALSTD---EKVLWVTETTANRLHRIA 205 (319)
T ss_dssp CEEEEECCCBTTBCCEEEEEECTTS------------CCEEEEE-EEESSEEEEEECTT---SSEEEEEEGGGTEEEEEE
T ss_pred CEEECCCCCCCCCCCCEEEEEECCC------------CEEEEEE-ECCCEEEEEEECCC---CCEEEEECCCCCCEEEEE
T ss_conf 5320013540025742157884166------------3357886-12330100010122---212787404689147999
Q ss_pred CCCCCC-CCE-----ECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCC
Q ss_conf 998964-430-----0058887663899996999899999279939999688896435265035
Q 000410 1275 TRSNSN-TWT-----LKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ 1332 (1553)
Q Consensus 1275 lrt~~~-~~~-----l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~ 1332 (1553)
+..... ... .......+....++++++|+..++....|.|.+||- .+..+..+..+.
T Consensus 206 ~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~ 268 (319)
T d2dg1a1 206 LEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPG 268 (319)
T ss_dssp ECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTT
T ss_pred ECCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC-CCCEEEEEECCC
T ss_conf 769983620246333312577641036417389999999848998999979-995988996887
|
| >d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: beta-Catenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.63 E-value=0.029 Score=27.56 Aligned_cols=103 Identities=18% Similarity=0.149 Sum_probs=55.9
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCC----CCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 88843102678012999999999970369920013----42231121024488703678999999976244610189988
Q 000410 502 LLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRL----QRVLPHVIAMLSDPAAIVRCAALETLCDILPLVRNFPPSDA 577 (1553)
Q Consensus 502 ~i~s~~R~~~~~~sk~~~l~ll~~~s~~~~de~~l----drilPy~~~ll~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~ 577 (1553)
.+...+++-.....+..++.++..++.. ++++- .-.+|-++.++.+.+..++..|+.++..+-. ....
T Consensus 189 ~L~~ll~~~~~~~~~~~~~~~l~~ls~~--~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a~~~l~~ls~------~~~~ 260 (529)
T d1jdha_ 189 ALVNIMRTYTYEKLLWTTSRVLKVLSVC--SSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSD------AATK 260 (529)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHTTS--TTHHHHHHHTTHHHHHHTTTTSSCHHHHHHHHHHHHHHHT------TCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC------CCCC
T ss_conf 8999998610489999999987511013--3233045654333469998625401555301567775043------2110
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 76632323346799999982256878841899999
Q 000410 578 KIFPEYILPMLSMLPDDPEESVRICYASNIAKLAL 612 (1553)
Q Consensus 578 ~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~ 612 (1553)
....+-++|.|..+..+++..|+..-+.+|..|+.
T Consensus 261 ~~~~~~~i~~Lv~ll~~~~~~~~~~a~~~L~~l~~ 295 (529)
T d1jdha_ 261 QEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTC 295 (529)
T ss_dssp CSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHCC
T ss_conf 25664010144541245428899999998875012
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=0.047 Score=26.01 Aligned_cols=120 Identities=12% Similarity=0.098 Sum_probs=60.1
Q ss_pred EEEEEECCCCEEEEEE-CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCE
Q ss_conf 8999832986999980-799399999331256888643345643421002699848999981279985039999958963
Q 000410 1191 LCTMMLRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCG 1269 (1553)
Q Consensus 1191 ~~i~f~~~~~~lvs~s-~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~ 1269 (1553)
..+-|+|+|+.||... ++..+..+.+..... .....+....+...+... ....
T Consensus 176 ~a~~WSPDgk~iaf~~~D~s~V~~~~~~~~~~-------------------~~~p~~~~~~Yp~~G~~n-------p~~~ 229 (465)
T d1xfda1 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTG-------------------SIYPTVKPYHYPKAGSEN-------PSIS 229 (465)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSS-------------------SSSCCCEEEECCBTTSCC-------CEEE
T ss_pred CEEEECCCCCEEEEEEECCCCCCEEECCCCCC-------------------CCCCEEEEEECCCCCCCC-------CCEE
T ss_conf 34897798986899995366661464123445-------------------444313345302568889-------7213
Q ss_pred EEEEECCCCCCCCEECC----CCCCCCEEEEEECCCCCEEEEEECCC----CEEEEECCCCCCCCEEECCCCCCC
Q ss_conf 99996998964430005----88876638999969998999992799----399996888964352650356883
Q 000410 1270 IHLWDTRSNSNTWTLKA----IPEEGYVSSLVTGPCGNWFVSGSSRG----VLTLWDLRFLVPVNSWQYSQVCPI 1336 (1553)
Q Consensus 1270 I~iwDlrt~~~~~~l~~----~~h~g~Itsi~~sp~g~~LvsGs~dG----~I~iWDlr~~~~i~s~~~~~~~~I 1336 (1553)
+.++|+.++........ ......+..+.|.+++++++....++ .+.++|...+.+...+.....+.|
T Consensus 230 l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv 304 (465)
T d1xfda1 230 LHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWL 304 (465)
T ss_dssp EEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred EEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCEE
T ss_conf 799836898178999525767666630456687579938999974100301379970799927877897278517
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=95.29 E-value=0.05 Score=25.86 Aligned_cols=200 Identities=6% Similarity=-0.002 Sum_probs=91.9
Q ss_pred CCCCEEEEEEECCCCEEEEEE-CCCCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEE
Q ss_conf 797128999832986999980-7993999993312568886433456434210026998489999812799850399999
Q 000410 1186 EGSRALCTMMLRHSAQVVVGA-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYS 1264 (1553)
Q Consensus 1186 h~~~I~~i~f~~~~~~lvs~s-~DGsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~ 1264 (1553)
+...+..-+|+|+|+.||-.. .++...+|...... .................|+|+ +..++..
T Consensus 37 ~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~spd---g~~i~~~ 100 (269)
T d2hqsa1 37 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN-------------GAVRQVASFPRHNGAPAFSPD---GSKLAFA 100 (269)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-------------CCEEEEECCSSCEEEEEECTT---SSEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCC-------------CCEEEEEEEECCCCCCEECCC---CCEEEEE
T ss_conf 898426038878999899998152675134431136-------------750677642024543024488---9864676
Q ss_pred E-CCCEEE--EEECCCCCCCCEECCCCCCCCEEEEEECCCCCEEEE-EECCCCEEEEECCCCCCCCEEECCCCCCCCEEE
Q ss_conf 5-896399--996998964430005888766389999699989999-927993999968889643526503568831489
Q 000410 1265 T-QNCGIH--LWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVS-GSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1340 (1553)
Q Consensus 1265 s-~dg~I~--iwDlrt~~~~~~l~~~~h~g~Itsi~~sp~g~~Lvs-Gs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~ 1340 (1553)
. .++... .+............ .........+++++.++.. ...+|...+|.......................
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 177 (269)
T d2hqsa1 101 LSKTGSLNLYVMDLASGQIRQVTD---GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDAD 177 (269)
T ss_dssp ECTTSSCEEEEEETTTCCEEECCC---CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEE
T ss_pred EECCCCCCEEECCCCCCCCEEEEE---CCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCC
T ss_conf 402786410000222122000010---14421145434554433000012687438654213310001000122223432
Q ss_pred EECCCCCCCCCCCCCCEEEEEEC-CCE--EEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 64599997544689988999976-993--999995888189998614689987667776323589988999863222445
Q 000410 1341 LFVPPPNAAVSTTARPLIYVAAG-CNE--VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVN 1417 (1553)
Q Consensus 1341 ~~~p~~~~~~~s~~~~~i~s~s~-dg~--I~iWDi~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 1417 (1553)
+ +|+ +..++..+. .+. +.+.+...+.+. .+.
T Consensus 178 ~-spd---------g~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~----------------------------------- 211 (269)
T d2hqsa1 178 V-SSD---------GKFMVMVSSNGGQQHIAKQDLATGGVQ-VLS----------------------------------- 211 (269)
T ss_dssp E-CTT---------SSEEEEEEECSSCEEEEEEETTTCCEE-ECC-----------------------------------
T ss_pred C-CCC---------CCEEEEEEECCCCEEEEEEECCCCCCE-EEE-----------------------------------
T ss_conf 2-345---------430577860588012567603564405-850-----------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCC-EEE---ECCCCCEEEEEECCCC
Q ss_conf 322223338999886681782338999-089---8169981999839999
Q 000410 1418 QKYRVDELNEPPPRLLGIRSLLPLPGG-DLL---TGGTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1418 ~~~~~~~l~~~~~~~~~V~sl~~sp~g-~Ll---Tgg~Dg~IrlWDl~~~ 1463 (1553)
.........|+|+| .|+ .-+....|.+|++...
T Consensus 212 -------------~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~ 248 (269)
T d2hqsa1 212 -------------STFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 248 (269)
T ss_dssp -------------CSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred -------------CCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCC
T ss_conf -------------6865445589899999999981799847999999999
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.12 E-value=0.056 Score=25.50 Aligned_cols=132 Identities=14% Similarity=0.042 Sum_probs=66.4
Q ss_pred CCCEEEEEEEECCCE-EEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCC--CEEEE--EEEEEECCEEEEEECCCCCC
Q ss_conf 570999999988955-99999951699747899999999999999618999--75488--79998088799990353599
Q 000410 36 SRFFKSILCKHDEGL-VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP--HVWAF--QFWQETDKAAYLLRQYFFNS 110 (1553)
Q Consensus 36 G~f~~V~~a~~~~~~-vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hp--nIl~~--~~~~~~~~~~~LV~e~~~gs 110 (1553)
+.--.||++...+|. +++|+.... ....++...++.-. ..|....-| ..+.. -..++.+...+.+++++.|.
T Consensus 33 s~EN~vy~v~~~dg~~~VlK~~rp~--~~s~~~i~~E~~~l-~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~ 109 (325)
T d1zyla1 33 SYENRVYQFQDEDRRRFVVKFYRPE--RWTADQILEEHQFA-LQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR 109 (325)
T ss_dssp CSSSEEEEECCTTCCCEEEEEECTT--TSCHHHHHHHHHHH-HHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred CCCCEEEEEECCCCCEEEEEEECCC--CCCHHHHHHHHHHH-HHHHHCCCCCCCCEECCCCEEEEEEEEEEEEEEECCCC
T ss_conf 6120269998389997999984787--78899999999999-99985599878752068980566534799998652776
Q ss_pred H-------------------HHHHCC-----CCCCCH-------------------H---HHHHHHHHHHHHHHHHH---
Q ss_conf 8-------------------888609-----999999-------------------9---99999999999999999---
Q 000410 111 L-------------------RDRLST-----PPFLSL-------------------V---EKKWLAFQLLLAVKQCH--- 141 (1553)
Q Consensus 111 L-------------------~d~l~~-----~~~l~~-------------------~---~~~~i~~Qil~aL~~lH--- 141 (1553)
. ...... ++.++. . .....+.+++..+...-
T Consensus 110 ~~~~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 189 (325)
T d1zyla1 110 QFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRED 189 (325)
T ss_dssp ECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 88999999999989999998863035786556778978876656899987476998898999999999999999845456
Q ss_pred -HCCCEECCCCCCCEEEECCCCEEEEECCCCC
Q ss_conf -8898525788996899139929994137632
Q 000410 142 -EKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 142 -~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k 172 (1553)
..++||||+.+.|||++. + ..++||+.+.
T Consensus 190 ~p~~liHgDlh~~NvL~~~-~-~~~IDFdd~~ 219 (325)
T d1zyla1 190 FTVLRLHGDCHAGNILWRD-G-PMFVDLDDAR 219 (325)
T ss_dssp SCCEECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred CCCEEECCCCCCCCEEEEC-C-CEEEECHHCC
T ss_conf 8712024788804287838-9-3588652014
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.95 E-value=0.062 Score=25.18 Aligned_cols=28 Identities=18% Similarity=0.030 Sum_probs=12.6
Q ss_pred CEEEEEECCCCCEEE-EEECCCCEEEEEC
Q ss_conf 638999969998999-9927993999968
Q 000410 1292 YVSSLVTGPCGNWFV-SGSSRGVLTLWDL 1319 (1553)
Q Consensus 1292 ~Itsi~~sp~g~~Lv-sGs~dG~I~iWDl 1319 (1553)
..+.++++++++.++ +.+..+.|..+++
T Consensus 149 ~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~ 177 (295)
T d2ghsa1 149 IPNSICFSPDGTTGYFVDTKVNRLMRVPL 177 (295)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred CCCEEEECCCCCEEEEEECCCCEEEEEEE
T ss_conf 76402465877668985156632467645
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=94.46 E-value=0.081 Score=24.38 Aligned_cols=53 Identities=6% Similarity=-0.016 Sum_probs=29.8
Q ss_pred EECCC--CCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEE
Q ss_conf 99079--97999993999599994897753332222035641797128999832986999980
Q 000410 1146 AISHD--HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1146 ~~spd--~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs~s 1206 (1553)
..+|| |+.+|-.+. |-|.+.|+..++ .+ .+..+.+.+....|+|+|+.||-..
T Consensus 5 ~~sPdi~G~~v~f~~~-~dl~~~d~~~g~------~~-~Lt~~~~~~~~p~~SPDG~~iaf~~ 59 (281)
T d1k32a2 5 LLNPDIHGDRIIFVCC-DDLWEHDLKSGS------TR-KIVSNLGVINNARFFPDGRKIAIRV 59 (281)
T ss_dssp CEEEEEETTEEEEEET-TEEEEEETTTCC------EE-EEECSSSEEEEEEECTTSSEEEEEE
T ss_pred CCCCCCCCCEEEEEEC-CCEEEEECCCCC------EE-EEECCCCCCCCEEECCCCCEEEEEE
T ss_conf 2588879999999909-968999899998------79-9766998526779878999899998
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=93.77 E-value=0.11 Score=23.45 Aligned_cols=84 Identities=6% Similarity=-0.084 Sum_probs=44.8
Q ss_pred CCCC--CCCCEEEECCCCCCCEEEEEECCCCCEEEEEEC-CC-----CEEEEECCCCCCCCCCCCCEEEECCCCCEEEEE
Q ss_conf 8855--575375450224457459999079979999939-99-----599994897753332222035641797128999
Q 000410 1123 SGWR--PRGILVAHLQEHCSAVNEIAISHDHSFFVSASD-DS-----TVKVWDSRKLEKDISFRSRLTYHLEGSRALCTM 1194 (1553)
Q Consensus 1123 ~~W~--p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~-DG-----tVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~ 1194 (1553)
.+|. ..|.-...|..+.+.+...+|||||+.+|-.+. ++ .+.+++...++......................
T Consensus 22 dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~~~~ 101 (281)
T d1k32a2 22 DLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAG 101 (281)
T ss_dssp EEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSEEEE
T ss_pred CEEEEECCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 68999899998799766998526779878999899998628987722899998259952886416887547644434310
Q ss_pred EECCCCEEEEEE
Q ss_conf 832986999980
Q 000410 1195 MLRHSAQVVVGA 1206 (1553)
Q Consensus 1195 f~~~~~~lvs~s 1206 (1553)
|+|+++.++...
T Consensus 102 ~spdg~~l~~~~ 113 (281)
T d1k32a2 102 FDPDGNLIISTD 113 (281)
T ss_dssp ECTTCCEEEEEC
T ss_pred CCCCCCEEEEEE
T ss_conf 279887799997
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.45 E-value=0.12 Score=23.09 Aligned_cols=50 Identities=18% Similarity=0.132 Sum_probs=31.5
Q ss_pred CCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEE
Q ss_conf 999089816998199983999999649718998898898407886058709999
Q 000410 1442 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQ 1495 (1553)
Q Consensus 1442 p~g~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 1495 (1553)
.++.+++|+.|+.++.+|.++++......-+.... ....+|+ .+|.+.+-
T Consensus 474 agglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~-a~P~ty~---~dGkqYi~ 523 (571)
T d2ad6a1 474 KGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGI-GSPMTYS---FKGKQYIG 523 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCC-SCCEEEE---ETTEEEEE
T ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCE-ECCEEEE---ECCEEEEE
T ss_conf 69979997789969999999986878998999965-1564898---89999999
|
| >d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: Armadillo repeat domain: Exportin Cse1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.14 E-value=0.014 Score=29.73 Aligned_cols=204 Identities=10% Similarity=0.128 Sum_probs=106.6
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 48870367899999997624461018998876632323346799999982256878841899999999999999974201
Q 000410 548 SDPAAIVRCAALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDDPEESVRICYASNIAKLALTAYGFLVHSIRLSEA 627 (1553)
Q Consensus 548 ~d~~~~Vr~~al~~l~~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~ 627 (1553)
++..+.+|+.|+.++.+.-... ++ ..++ -++|.+..+.+|++..||..-|.++..+. +. .
T Consensus 468 ~~~~~~lr~~~~~~i~~~~~~~---~~---~~~~-~~~~~l~~~L~~~~~~V~~~a~~al~~~~-------~~----~-- 527 (959)
T d1wa5c_ 468 NIPHIILRVDAIKYIYTFRNQL---TK---AQLI-ELMPILATFLQTDEYVVYTYAAITIEKIL-------TI----R-- 527 (959)
T ss_dssp SCSCHHHHHHHHHHHHHTGGGS---CH---HHHH-HHHHHHHHHTTCSCHHHHHHHHHHHHHHT-------TC----B--
T ss_pred CCCHHHHHHHHHHHHHHHHHHC---CH---HHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHH-------HH----H--
T ss_conf 8750999999999998777412---67---8899-99999998727996158999999999999-------86----6--
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH----HHHHHCCCCHHCCCCCCCC
Q ss_conf 344446899999999984201211146089999999999999999822999996999----9998333000001386565
Q 000410 628 GVLDKLSAPHKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIR----RALLQDIGNLCSFFGQRQS 703 (1553)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ll~~~d~~~~vk----~all~~i~~Lc~FFG~~kt 703 (1553)
... ... . ..+..+.-...+...++..+..+.. . ....-+ -.+++-|..++..||..-.
T Consensus 528 ---~~~---------~~~--~--~~~~~~~l~p~l~~ll~~L~~~l~~-~-~~~~~~~~~~~~ll~~l~~ii~~~~~~~~ 589 (959)
T d1wa5c_ 528 ---ESN---------TSP--A--FIFHKEDISNSTEILLKNLIALILK-H-GSSPEKLAENEFLMRSIFRVLQTSEDSIQ 589 (959)
T ss_dssp ---SCS---------SSC--C--BSSCGGGTTTTHHHHHHHHHHHHHT-T-CCCHHHHTSCHHHHHHHHHHHHHHTTTTG
T ss_pred ---CCC---------CCC--H--HHCCHHHHHHHHHHHHHHHHHHHHH-H-CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---003---------320--0--1032887775699999999999986-1-22025678899999999999998798888
Q ss_pred C--CCCCCCCCCC----CCC-CCHHHHHHHHHCCCEEEEEECCCH---HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 5--3212222213----569-875589999710241345304311---45748888876327982488999999999999
Q 000410 704 N--DFLLPILPAF----LND-RDEQLRAVFYGQIVYVCFFVGERS---VEEYLLPYIEQALSDATEAVIVNALDCLAILC 773 (1553)
Q Consensus 704 n--d~iL~hlit~----LNd-~d~~LR~aff~~i~~v~~~vG~~s---~e~~ilPll~q~l~D~eE~Vv~~~l~~l~~l~ 773 (1553)
. +.+++.++.. .++ .+..++...|++|..+..++|+.. +++.++|++.+.+..........+++-+..+.
T Consensus 590 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~e~l~~l~~~~~~~~~~~l~~~l~p~i~~~~~~~~~~~~~~~~~l~~~~~ 669 (959)
T d1wa5c_ 590 PLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVV 669 (959)
T ss_dssp GGHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 89999999999999998568423678999999999999842813599999999999999984331647899999999998
Q ss_pred HCCCCCHHHHHHHHHH
Q ss_conf 8198845789999985
Q 000410 774 KSGYLRKRILLEMIER 789 (1553)
Q Consensus 774 ~~gl~~k~~~~~~~~~ 789 (1553)
+..---...++++...
T Consensus 670 ~~~~~~~~~~~~l~~~ 685 (959)
T d1wa5c_ 670 EQSATIPESIKPLAQP 685 (959)
T ss_dssp HHCSSCCTTTGGGHHH
T ss_pred HHCCCCCHHHHHHHHH
T ss_conf 7477866889999999
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.07 E-value=0.14 Score=22.69 Aligned_cols=193 Identities=12% Similarity=0.056 Sum_probs=103.9
Q ss_pred CCCCCCEEEECCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEE
Q ss_conf 55575375450224457459999079979999939995999948977533322220356417971289998329869999
Q 000410 1125 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV 1204 (1553)
Q Consensus 1125 W~p~G~lv~~l~~H~~~V~~i~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~t~~~h~~~I~~i~f~~~~~~lvs 1204 (1553)
|+|.+.....+. ....+.++++.+++.++++ +.+| +.++|..+++...-... ........+.++.+.++|+..++
T Consensus 45 ~d~~~g~~~~~~-~~~~~~~i~~~~dg~l~va-~~~g-l~~~d~~tg~~~~l~~~--~~~~~~~~~nd~~vd~~G~iw~~ 119 (295)
T d2ghsa1 45 LHLASGRKTVHA-LPFMGSALAKISDSKQLIA-SDDG-LFLRDTATGVLTLHAEL--ESDLPGNRSNDGRMHPSGALWIG 119 (295)
T ss_dssp EETTTTEEEEEE-CSSCEEEEEEEETTEEEEE-ETTE-EEEEETTTCCEEEEECS--STTCTTEEEEEEEECTTSCEEEE
T ss_pred EECCCCEEEEEE-CCCCCEEEEEECCCCEEEE-EECC-CEEEECCCCEEEEEEEE--ECCCCCCCCEEEEECCCCCEEEE
T ss_conf 989989599998-9998179899659988999-7376-38950464513578664--04787661013579799999887
Q ss_pred EECC----CCEEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCEEEEEECCCCC-
Q ss_conf 8079----93999993312568886433456434210026998489999812799850399999589639999699896-
Q 000410 1205 GACD----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS- 1279 (1553)
Q Consensus 1205 ~s~D----GsI~iwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~s~~~L~~~s~dg~I~iwDlrt~~- 1279 (1553)
...+ +.-.+|++.. + ....... .-.....+.|+++. ..++++-+..+.|..+++....
T Consensus 120 ~~~~~~~~~~g~l~~~~~-----g---------~~~~~~~-~~~~~Ng~~~s~d~--~~l~~~dt~~~~I~~~~~d~~~~ 182 (295)
T d2ghsa1 120 TMGRKAETGAGSIYHVAK-----G---------KVTKLFA-DISIPNSICFSPDG--TTGYFVDTKVNRLMRVPLDARTG 182 (295)
T ss_dssp EEETTCCTTCEEEEEEET-----T---------EEEEEEE-EESSEEEEEECTTS--CEEEEEETTTCEEEEEEBCTTTC
T ss_pred ECCCCCCCCCEEEEEECC-----C---------CEEEEEE-CCCCCCEEEECCCC--CEEEEEECCCCEEEEEEECCCCC
T ss_conf 426431333305766229-----9---------6899865-06876402465877--66898515663246764535555
Q ss_pred -----CCCEECCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCEEECCCCCCCCEEEE
Q ss_conf -----44300058887663899996999899999279939999688896435265035688314896
Q 000410 1280 -----NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCL 1341 (1553)
Q Consensus 1280 -----~~~~l~~~~h~g~Itsi~~sp~g~~LvsGs~dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~ 1341 (1553)
...........+.+..++++.+|+..++....|.|..||- .+..+..+..+.. .+++++|
T Consensus 183 ~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~-~~T~~~F 247 (295)
T d2ghsa1 183 LPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGK-QTTCPAF 247 (295)
T ss_dssp CBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCS-BEEEEEE
T ss_pred CCCCCEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCEEEECC-CCCEEEEECCCCC-CEEEEEE
T ss_conf 324535788416755566632678699998953207884688569-9928668638998-5279898
|
| >d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: PBS lyase HEAT-like repeat domain: MTH187 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=92.79 E-value=0.05 Score=25.86 Aligned_cols=81 Identities=21% Similarity=0.171 Sum_probs=49.8
Q ss_pred HHHCCCCCCHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 98229999969999998333000001386565532122222135698755899997102413453043114574888887
Q 000410 672 ELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIE 751 (1553)
Q Consensus 672 ~ll~~~d~~~~vk~all~~i~~Lc~FFG~~ktnd~iL~hlit~LNd~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~ 751 (1553)
.++. |.++.||++-+.-+... |..+ .++.|+..|+|+||..|.+-.+++-.+ |. +-..|+|.
T Consensus 29 ~~l~--d~~~~vR~~a~~~L~~~----~~~~----~~~~L~~~l~d~~~~VR~~a~~aL~~i----~~----~~~~~~L~ 90 (111)
T d1te4a_ 29 ESLS--NEDWRIRGAAAWIIGNF----QDER----AVEPLIKLLEDDSGFVRSGAARSLEQI----GG----ERVRAAME 90 (111)
T ss_dssp HGGG--CSCHHHHHHHHHHHGGG----CSHH----HHHHHHHHHHHCCTHHHHHHHHHHHHH----CS----HHHHHHHH
T ss_pred HHHC--CCCHHHHHHHHHHHHHC----CHHH----HHHHHHHHHCCCHHHHHHHHHHHHHHH----CC----CCHHHHHH
T ss_conf 9974--99878999999998761----0123----279987330230337999999999986----76----11499999
Q ss_pred HHCCCCCHHHHHHHHHHHH
Q ss_conf 6327982488999999999
Q 000410 752 QALSDATEAVIVNALDCLA 770 (1553)
Q Consensus 752 q~l~D~eE~Vv~~~l~~l~ 770 (1553)
+.|.|+++.|...|+.+|.
T Consensus 91 ~ll~d~~~~vr~~A~~aL~ 109 (111)
T d1te4a_ 91 KLAETGTGFARKVAVNYLE 109 (111)
T ss_dssp HHTTSCCTHHHHHHHHHGG
T ss_pred HHHCCCCHHHHHHHHHHHH
T ss_conf 9882998999999999987
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.62 E-value=0.11 Score=23.54 Aligned_cols=56 Identities=20% Similarity=0.185 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCCC---CCCCCCCCCEEEECCC-CCCCHHHHHHHHHHHHHC
Q ss_conf 7801299999999997036992---0013422311210244-887036789999999762
Q 000410 511 KLPHYRRAAILLLKSSSLFIDD---EDRLQRVLPHVIAMLS-DPAAIVRCAALETLCDIL 566 (1553)
Q Consensus 511 ~~~~sk~~~l~ll~~~s~~~~d---e~~ldrilPy~~~ll~-d~~~~Vr~~al~~l~~~l 566 (1553)
..+.-|..|+..|-.+++.-.. ...-.-++|.++.+++ +..+.||..|+.+|..+.
T Consensus 71 ~~~~vr~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~lL~~~~~~~v~~~a~~aL~~l~ 130 (264)
T d1xqra1 71 GAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLV 130 (264)
T ss_dssp SSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCSCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 999999999999999998888888999972763799999604998999999999999874
|
| >d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: ARM repeat family: HspBP1 domain domain: Hsp70-binding protein 1 (HspBP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.77 E-value=0.092 Score=23.95 Aligned_cols=53 Identities=23% Similarity=0.115 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHCCCCCC---CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHC
Q ss_conf 12999999999970369920---013422311210244887036789999999762
Q 000410 514 HYRRAAILLLKSSSLFIDDE---DRLQRVLPHVIAMLSDPAAIVRCAALETLCDIL 566 (1553)
Q Consensus 514 ~sk~~~l~ll~~~s~~~~de---~~ldrilPy~~~ll~d~~~~Vr~~al~~l~~~l 566 (1553)
+.|..|++.|..+++-.+.- .++--+.|.+..+++++++.||..|+..|..+.
T Consensus 32 ~~~~~Al~~L~~L~~~~d~a~~l~~~gg~~~ll~~ll~s~~~~vr~~A~~~L~~l~ 87 (264)
T d1xqra1 32 QEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCS 87 (264)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999997697889999986999999999837999999999999999999
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=88.40 E-value=0.37 Score=19.70 Aligned_cols=61 Identities=11% Similarity=-0.034 Sum_probs=32.0
Q ss_pred CCCEEEEECCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEC
Q ss_conf 9939999688896435265035688314896459999754468998899997699399999588818999861
Q 000410 1311 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRT 1383 (1553)
Q Consensus 1311 dG~I~iWDlr~~~~i~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~i~s~s~dg~I~iWDi~tg~~~~~l~~ 1383 (1553)
.|.|..+|+.+++.+..... ..+... . .....+.++++++.|+.++.+|.++|+.+-.+..
T Consensus 443 ~G~l~AiD~~TG~~~W~~~~--~~~~~~---------g-~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l 503 (571)
T d2ad6a1 443 MGQIRAFDLTTGKAKWTKWE--KFAAWG---------G-TLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEE--SSCCCS---------B-CEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEECCCCCCEEEECCC--CCCCCC---------C-EEEECCCEEEEECCCCEEEEEECCCCCEEEEEEC
T ss_conf 56178853677846427678--999875---------6-0596699799977899699999999868789989
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=87.78 E-value=0.4 Score=19.44 Aligned_cols=32 Identities=19% Similarity=0.168 Sum_probs=24.2
Q ss_pred CCCEEEECCCCCEEEEEECCCCCCCEEEECCC
Q ss_conf 99908981699819998399999964971899
Q 000410 1442 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPN 1473 (1553)
Q Consensus 1442 p~g~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~ 1473 (1553)
.++.+++|+.|+.+|-+|.++++....+.-+.
T Consensus 496 agglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~ 527 (582)
T d1flga_ 496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCCEEEEECCCCEEEEEECCCCCEEEEEECCC
T ss_conf 69869996799969999999986867988999
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=83.44 E-value=0.64 Score=18.01 Aligned_cols=50 Identities=14% Similarity=0.124 Sum_probs=31.1
Q ss_pred CCCEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCEEEEECCCEEEEE
Q ss_conf 999089816998199983999999649718998898898407886058709999
Q 000410 1442 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQ 1495 (1553)
Q Consensus 1442 p~g~LlTgg~Dg~IrlWDl~~~~~s~~i~g~~~~~~~~~~~~~~~~~~~~~~~~ 1495 (1553)
.++.+++|..|+.+|-+|..+++......-+... .....+|+ .+|.+.+.
T Consensus 468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~-~~~P~ty~---~dGkqyv~ 517 (560)
T d1kv9a2 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGI-VAAPMTFE---LAGRQYVA 517 (560)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCC-CSCCEEEE---ETTEEEEE
T ss_pred CCCEEEEECCCCCEEEEECCCCCEEEEEECCCCC-CCCCEEEE---ECCEEEEE
T ss_conf 7998999778981999999998582799899995-51677999---89999999
|