Citrus Sinensis ID: 000423
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1527 | 2.2.26 [Sep-21-2011] | |||||||
| P54697 | 2245 | Myosin-J heavy chain OS=D | yes | no | 0.607 | 0.412 | 0.422 | 0.0 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | yes | no | 0.666 | 0.556 | 0.402 | 0.0 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | yes | no | 0.640 | 0.529 | 0.396 | 0.0 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | no | no | 0.668 | 0.550 | 0.402 | 0.0 | |
| Q99104 | 1853 | Unconventional myosin-Va | yes | no | 0.666 | 0.549 | 0.401 | 0.0 | |
| Q02440 | 1829 | Unconventional myosin-Va | yes | no | 0.669 | 0.558 | 0.400 | 0.0 | |
| P21271 | 1818 | Unconventional myosin-Vb | no | no | 0.645 | 0.541 | 0.388 | 0.0 | |
| P70569 | 1846 | Unconventional myosin-Vb | no | no | 0.645 | 0.534 | 0.388 | 0.0 | |
| Q876G9 | 1568 | Myosin-2 OS=Saccharomyces | N/A | no | 0.661 | 0.644 | 0.378 | 0.0 | |
| P19524 | 1574 | Myosin-2 OS=Saccharomyces | yes | no | 0.662 | 0.642 | 0.371 | 0.0 |
| >sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 | Back alignment and function desciption |
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Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/1016 (42%), Positives = 608/1016 (59%), Gaps = 89/1016 (8%)
Query: 10 GSHVWVEHPELAWVDGEVFK---ISAEEVHVHTTNGQTVITNISKVFPKDTEAPPGGVDD 66
G+ VW+ EL W+ +V + SA++V V T + + V +SKVF K+ + G VDD
Sbjct: 27 GAGVWIPDQELGWIGADVIEHSETSADQVLVRTEDDREVKIPLSKVFQKNPDILEG-VDD 85
Query: 67 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 126
++ LS+LHEP +LHNL RY LN+IYTY G ILIAINP+ LP LY M+ Y G Q G
Sbjct: 86 LSFLSHLHEPAILHNLHHRYNLNQIYTYIGKILIAINPYTSLP-LYGKEMISAYYGKQLG 144
Query: 127 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG-------R 179
L+PHV+A+A+ A++ M +G S SILVSGESGAGKTETTK L++Y A +G
Sbjct: 145 TLAPHVYAVAEDAFKDMRYDGTSQSILVSGESGAGKTETTKFLLQYFAAMGNMIKESTSS 204
Query: 180 SGVEG-----------------------RTVEQQVLESNPVLEAFGNAKTVRNNNSSRFG 216
S + G ++VE++VLES P+LEAFGNAKT+RN+NSSRFG
Sbjct: 205 SSINGINTSSDGIPVTPPPSPMKKSPVDKSVEERVLESTPLLEAFGNAKTLRNDNSSRFG 264
Query: 217 KFVELQFDKNGRISGAAVRTYLLERSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGD 275
KF+E+ F++ G I GA + TYLLE+SR+ + ERNYH FY LL A E++EK L
Sbjct: 265 KFIEIHFNEMGSIIGAKILTYLLEKSRIVRQVYNERNYHIFYQLLSGASEELKEKLNLKT 324
Query: 276 PKSFHYLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFA 335
+ + YLN+S C+ ++GV D E + T AM + GI+ EQ+ +FR+++AIL +GN EF
Sbjct: 325 IEEYSYLNKSGCFEIEGVSDEEHFNKTCHAMQVAGITLVEQENVFRILSAILLIGNFEFE 384
Query: 336 K--GEEADSSVIKDEKSRFHLNTTAELLKC-DAKSLEDALINRVMVTPEEVITRTLDPVA 392
G DS + D R L + LL C L ++++ R +VT +E
Sbjct: 385 NIAGSNDDSCQLID---RDPLEKVSVLLGCAQPDELLNSMLTRKVVTGKESYISHNTKER 441
Query: 393 AVGSRDALAKTVYSRLFDWLVDKINS--SIGQDPNSRTIIGVLDIYGFESFKLNSFEQFC 450
A +RD+L+ +Y +FDWLV KINS SI S++ IGVLDIYGFESF++N FEQFC
Sbjct: 442 AENARDSLSMFLYGMMFDWLVVKINSSMSISTQQKSKSFIGVLDIYGFESFEVNGFEQFC 501
Query: 451 INFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEA 510
IN+ NEKLQQ FNQHVFK EQ+EY KE+I+WSYI+F DNQD LDLIEKKP I+ LLDE
Sbjct: 502 INYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYIDFNDNQDTLDLIEKKPICILTLLDEE 561
Query: 511 CMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVV 570
MFPK+T +T A KLY S+ +F KP+ S T+FTI+HYAG+VTY D FLDKNKD+++
Sbjct: 562 TMFPKATPQTLATKLYSKMTSHSKFEKPRFSSTAFTINHYAGKVTYETDQFLDKNKDFII 621
Query: 571 AEHQVLLTASKCPFVSGL------FPPLP-----------------EESSKSSKFSSIGS 607
E +L S F+ L F P S S KF S+GS
Sbjct: 622 PEQISILQRSNFSFIKVLMSHSDKFTQSPGGHPQGNGGPTSSNTKGTSGSSSMKFLSVGS 681
Query: 608 RFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGY 667
+F L +LM+T+++T PHY+RC+KPN P F ++I QLRCGGV+E++RI CAG+
Sbjct: 682 QFSTSLATLMKTISTTTPHYVRCIKPNPEKLPQTFNKQDVIHQLRCGGVMESVRICCAGF 741
Query: 668 PTRRTFYEFLHRFGVLAPDVLDGNY---------------DDKVACEKILDKMGLKG--Y 710
PTRR EF R+ +L V D N D K+ + +L + L Y
Sbjct: 742 PTRRLLSEFYQRYKILY--VKDINTGSGGGKKGSNNNKIKDPKILVQNLLTGIELSDDKY 799
Query: 711 QIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWR 770
+IG TKVFLRAGQ+A L+ R E L +A +IQ++ + Y+ RK + LR A++++Q+ R
Sbjct: 800 KIGLTKVFLRAGQLASLEDMRLEQLDRSATVIQKRWKGYLYRKRYKQLRDASLIIQTKLR 859
Query: 771 GILACKLYEQLRREAAALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRK 830
+ A + L+R +A+ IQK + ++ R Y R +++QLQT +R + + +
Sbjct: 860 SVHAKQQLSALQRTHSAILIQKVWRAHRDRVQYQKIRDASLQLQTVMRRHLFSEQVHRER 919
Query: 831 QTKAAIIIEAYLRRHTACSYYKSLKKAAVITQCGWRRRVARRELRNLKMAARETGALKEA 890
AAII++ +R+ + + ++ Q WR ++A+R L+ AR ++E
Sbjct: 920 CENAAIILQTKIRQILSKREVDKKLRGIILIQARWRMKLAKRVYIQLRAEARSLRTVQEQ 979
Query: 891 KDKLEKRVEELTWRLQFEKQLRTNLEEEKAQE---IAKLQDALQAMQLQVEEANFR 943
K+KL++++EEL WRL E + + LE++K + I++L ++LQ+ E +
Sbjct: 980 KNKLQEKLEELQWRLTSEAKRKQQLEDQKVKSDTTISELSSNNDHLELQLSEIQLK 1035
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Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 | Back alignment and function description |
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| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
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| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function description |
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| >sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 | Back alignment and function description |
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| >sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MYO2 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1527 | ||||||
| 255546055 | 1534 | myosin XI, putative [Ricinus communis] g | 0.999 | 0.994 | 0.893 | 0.0 | |
| 224091182 | 1539 | predicted protein [Populus trichocarpa] | 0.996 | 0.988 | 0.889 | 0.0 | |
| 297738619 | 1547 | unnamed protein product [Vitis vinifera] | 0.999 | 0.986 | 0.878 | 0.0 | |
| 359484294 | 1637 | PREDICTED: myosin-Vb-like [Vitis vinifer | 0.999 | 0.932 | 0.878 | 0.0 | |
| 359482502 | 1540 | PREDICTED: myosin-H heavy chain-like [Vi | 1.0 | 0.991 | 0.860 | 0.0 | |
| 297743058 | 1610 | unnamed protein product [Vitis vinifera] | 1.0 | 0.948 | 0.861 | 0.0 | |
| 56201391 | 1529 | myosin XI [Nicotiana tabacum] | 0.998 | 0.996 | 0.862 | 0.0 | |
| 116047947 | 1529 | myosin XI-K [Nicotiana benthamiana] | 0.998 | 0.996 | 0.861 | 0.0 | |
| 356564776 | 1561 | PREDICTED: myosin-Vb-like [Glycine max] | 1.0 | 0.978 | 0.870 | 0.0 | |
| 356545743 | 1554 | PREDICTED: myosin-Vb-like [Glycine max] | 0.997 | 0.980 | 0.868 | 0.0 |
| >gi|255546055|ref|XP_002514087.1| myosin XI, putative [Ricinus communis] gi|223546543|gb|EEF48041.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2828 bits (7331), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1366/1529 (89%), Positives = 1451/1529 (94%), Gaps = 3/1529 (0%)
Query: 2 AAPVNIIVGSHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAPP 61
A VNIIVGSHVWVE P++AW+DGEVFKI+ EEVHVH +NG+TVI NISKVFPKDTEAPP
Sbjct: 6 ATAVNIIVGSHVWVEDPKVAWIDGEVFKINGEEVHVHASNGKTVIANISKVFPKDTEAPP 65
Query: 62 GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYK 121
GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYK
Sbjct: 66 GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYK 125
Query: 122 GAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG 181
GA FGELSPHVFA+ADVAYRAM+NEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG
Sbjct: 126 GAGFGELSPHVFAVADVAYRAMMNEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG 185
Query: 182 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVE+QFDKNGRISGAAVRTYLLER
Sbjct: 186 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAVRTYLLER 245
Query: 242 SRVCQISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLA 301
SRVCQISDPERNYHCFYLLCAAP E R K+KL DPKSFHYLNQSNCYALDGVDD EEY+A
Sbjct: 246 SRVCQISDPERNYHCFYLLCAAPLEERAKYKLEDPKSFHYLNQSNCYALDGVDDAEEYIA 305
Query: 302 TRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELL 361
TRRAMDIVGISEEEQ+AIFRVVAA+LHLGNIEFAKG+E DSSVIKDE+SRFHLNTTAELL
Sbjct: 306 TRRAMDIVGISEEEQEAIFRVVAAVLHLGNIEFAKGKEIDSSVIKDERSRFHLNTTAELL 365
Query: 362 KCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIG 421
KCDAKSLEDALI RVMVTPEEVITRTLDPV A+ SRDALAKT+YSRLFDWLVDKIN+SIG
Sbjct: 366 KCDAKSLEDALIKRVMVTPEEVITRTLDPVGALVSRDALAKTIYSRLFDWLVDKINNSIG 425
Query: 422 QDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 481
QDPNS+ +IGVLDIYGFESFK NSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW
Sbjct: 426 QDPNSKQLIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 485
Query: 482 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLS 541
SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFK+NKRFIKPKLS
Sbjct: 486 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLS 545
Query: 542 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSK 601
RTSFTISHYAGEVTYLAD FLDKNKDYVVAEHQ LLTASKC FV+GLFPPLPEESSKSSK
Sbjct: 546 RTSFTISHYAGEVTYLADQFLDKNKDYVVAEHQDLLTASKCFFVAGLFPPLPEESSKSSK 605
Query: 602 FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIR 661
FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNN L+P IFENANIIQQLRCGGVLEAIR
Sbjct: 606 FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNVLKPMIFENANIIQQLRCGGVLEAIR 665
Query: 662 ISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLRA 721
ISCAGYPTRRTFYEFL RFGVLAP+VL+GN+DDKVAC+ ILDK GL GYQIGKTKVFLRA
Sbjct: 666 ISCAGYPTRRTFYEFLLRFGVLAPEVLEGNHDDKVACQMILDKRGLNGYQIGKTKVFLRA 725
Query: 722 GQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQL 781
GQMAELDARRAEVLGNAAR IQRQ RTYIARKEFIALRK+A+ LQS+ RG+LA KL+EQL
Sbjct: 726 GQMAELDARRAEVLGNAARTIQRQSRTYIARKEFIALRKSAVHLQSHCRGVLARKLFEQL 785
Query: 782 RREAAALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEAY 841
RR+AAALKIQKNF YTAR SYLT SSA+ LQTGLRAM AR+EFRFRKQTKAAI I+A
Sbjct: 786 RRQAAALKIQKNFRRYTARKSYLTLHSSAVTLQTGLRAMTARDEFRFRKQTKAAIAIQAQ 845
Query: 842 LRRHTACSYYKSLKKAAVITQCGWRRRVARRELRNLKMAARETGALKEAKDKLEKRVEEL 901
+R H A SYYK L+KAA+++QCGWR+RVARRELR LKMAARETGALKEAKDKLEKRVEEL
Sbjct: 846 VRCHIAYSYYKRLQKAALVSQCGWRQRVARRELRKLKMAARETGALKEAKDKLEKRVEEL 905
Query: 902 TWRLQFEKQLRTNLEEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAARKAIEEAPPI 961
TWRLQ EK+LRT+LEEEKAQEI+KLQDAL AMQ+QVEEAN R++KEQEAARKAIE+APP+
Sbjct: 906 TWRLQLEKRLRTDLEEEKAQEISKLQDALHAMQMQVEEANARVIKEQEAARKAIEDAPPV 965
Query: 962 VKETPVIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDTE 1021
+KETPVIV DTEK+E L AEV+SLKALLLSE+Q+AE+ARKAC DAE RN+EL +KLED
Sbjct: 966 IKETPVIVQDTEKVEKLMAEVESLKALLLSEKQAAEQARKACADAEARNSELGRKLEDAA 1025
Query: 1022 EKVGQLQESMQRLEEKLCNSESENQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNVQ 1081
+K QLQES+QRLEEKL NSESENQV+RQQAL MSPTGKSLSARPKT++IQRTPENGNV
Sbjct: 1026 QKADQLQESVQRLEEKLSNSESENQVLRQQALTMSPTGKSLSARPKTIIIQRTPENGNVA 1085
Query: 1082 NGEMK---DVTLAVTSAREPESEEKPQKSLNEKQQENQDLLIKCVSQNLGFSRSKPVAAS 1138
NGEMK D+ +A +AREPESEEKPQKSLNEKQQENQDLL+KC+SQNLGFS KPVAA
Sbjct: 1086 NGEMKVASDMIVATPNAREPESEEKPQKSLNEKQQENQDLLVKCISQNLGFSGGKPVAAC 1145
Query: 1139 VIYKCLLHWRSFEVERTTVFDRIIQTIASAIEVQDNNDVLAYWLSNSSTLLLLLQHTLKA 1198
++YKCLLHWRSFEVERT+VFDRIIQTIASAIEV DNNDVLAYWLSNSS LLLLLQHTLKA
Sbjct: 1146 IVYKCLLHWRSFEVERTSVFDRIIQTIASAIEVPDNNDVLAYWLSNSSALLLLLQHTLKA 1205
Query: 1199 SGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRGLGRLDDLRQVEAKYPALL 1258
SGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGR L RLDDLRQVEAKYPALL
Sbjct: 1206 SGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRALSRLDDLRQVEAKYPALL 1265
Query: 1259 FKQQLTAFLEKIYGMIRDNLKKDISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAH 1318
FKQQLTAFLEKIYGMIRDNLKK+ISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAH
Sbjct: 1266 FKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAH 1325
Query: 1319 WQSIVKSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK 1378
WQSIVKSLNSYLK MK NYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK
Sbjct: 1326 WQSIVKSLNSYLKIMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK 1385
Query: 1379 AGLAELEQWCYDATEEYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSIQQ 1438
AGLAELEQWCY+ATEE+AGSAWDELKHIRQAVGFLVI+QKPKKTL+EITKELCPVLSIQQ
Sbjct: 1386 AGLAELEQWCYEATEEFAGSAWDELKHIRQAVGFLVIHQKPKKTLSEITKELCPVLSIQQ 1445
Query: 1439 LYRISTMYWDDKYGTHSVSSEVISSMRVLMTEDSNNAVSSSFLLDDDSSIPFTVDDISKS 1498
LYRISTMYWDDKYGTHSVSS+VISSMRV+MTEDSNNAVSSSFLLDDDSSIPFTVDDISKS
Sbjct: 1446 LYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFLLDDDSSIPFTVDDISKS 1505
Query: 1499 LQQVDIADVEPPAVIRENSGFGFLLPRTE 1527
++QVDIA+++PP +IRENSGFGFLLPR+E
Sbjct: 1506 MKQVDIAEIDPPPLIRENSGFGFLLPRSE 1534
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091182|ref|XP_002309201.1| predicted protein [Populus trichocarpa] gi|222855177|gb|EEE92724.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297738619|emb|CBI27864.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359484294|ref|XP_002279028.2| PREDICTED: myosin-Vb-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359482502|ref|XP_002274978.2| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297743058|emb|CBI35925.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|56201391|dbj|BAD72949.1| myosin XI [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|116047947|gb|ABJ53199.1| myosin XI-K [Nicotiana benthamiana] | Back alignment and taxonomy information |
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| >gi|356564776|ref|XP_003550624.1| PREDICTED: myosin-Vb-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356545743|ref|XP_003541295.1| PREDICTED: myosin-Vb-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1527 | ||||||
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.995 | 0.983 | 0.805 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.993 | 0.986 | 0.712 | 0.0 | |
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.992 | 0.997 | 0.706 | 0.0 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.992 | 0.990 | 0.710 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.984 | 0.991 | 0.584 | 0.0 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.796 | 0.810 | 0.616 | 0.0 | |
| TAIR|locus:2045198 | 1556 | XIF "myosin-like protein XIF" | 0.751 | 0.737 | 0.630 | 0.0 | |
| TAIR|locus:2039007 | 1493 | XIG "myosin-like protein XIG" | 0.791 | 0.809 | 0.586 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.669 | 0.591 | 0.638 | 0.0 | |
| TAIR|locus:2046570 | 1770 | XID "myosin XI D" [Arabidopsis | 0.724 | 0.624 | 0.591 | 0.0 |
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 6306 (2224.9 bits), Expect = 0., P = 0.
Identities = 1229/1526 (80%), Positives = 1338/1526 (87%)
Query: 5 VNIIVGSHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAPPGGV 64
+NIIVGSHVW+E P AW+DGEV KI+ EEVH HTTNG+TV+ NI+ VFPKDTEAPPGGV
Sbjct: 19 INIIVGSHVWIEDPGAAWIDGEVVKINGEEVHAHTTNGKTVVANIANVFPKDTEAPPGGV 78
Query: 65 DDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQ 124
DDMTKLSYLHEPGVL+NLA RYELNEIYTYTGNILIA+NPFQRLPHLYDTHMMEQYKGA
Sbjct: 79 DDMTKLSYLHEPGVLNNLAMRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAG 138
Query: 125 FGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEG 184
FGELSPHVFAIA+VAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEG
Sbjct: 139 FGELSPHVFAIAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEG 198
Query: 185 RTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRV 244
RTVEQQVLESNPVLEAFGNAKT+RNNNSSRFGKFVELQFD GRISGAAVRTYLLERSRV
Sbjct: 199 RTVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDNCGRISGAAVRTYLLERSRV 258
Query: 245 CQISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRR 304
CQISDPERNYHCFYLLCAAPPE REKFKLGDPK FHYLNQS CY LDGVDDTEEYLATRR
Sbjct: 259 CQISDPERNYHCFYLLCAAPPEEREKFKLGDPKLFHYLNQSKCYKLDGVDDTEEYLATRR 318
Query: 305 AMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCD 364
AMDIVGISEEEQDAIFRVVAAILHLGN+ FAKG+E DSSV+KDEKSR+HL+ AELL+CD
Sbjct: 319 AMDIVGISEEEQDAIFRVVAAILHLGNVNFAKGKEIDSSVLKDEKSRYHLDVCAELLRCD 378
Query: 365 AKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDP 424
AK +EDALI RVMVTPEEVITRTLDP +A GSRDALAKT+YSRLFDWLVDKIN+SIGQDP
Sbjct: 379 AKKMEDALIKRVMVTPEEVITRTLDPDSATGSRDALAKTIYSRLFDWLVDKINNSIGQDP 438
Query: 425 NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYI 484
NS+TIIGVLDIYGFESFK+NSFEQFCINFTNEKLQQHFNQHVFKMEQE+YTKEEINWSYI
Sbjct: 439 NSKTIIGVLDIYGFESFKINSFEQFCINFTNEKLQQHFNQHVFKMEQEDYTKEEINWSYI 498
Query: 485 EFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLSRTS 544
EFVDN+DVL+LIEKKPGG+IALLDEACMFPKSTHETFAQKLYQTFK+ KRF KPKLSRTS
Sbjct: 499 EFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPKLSRTS 558
Query: 545 FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXXXXXXXXX 604
F ISHYAGEVTY ADLFLDKNKDYVVAEHQ LL AS FV+G
Sbjct: 559 FAISHYAGEVTYQADLFLDKNKDYVVAEHQDLLIASSDTFVAGLFPRLPEETSSKTKFSS 618
Query: 605 IGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISC 664
IGSRFKLQLQSLMETL+STEPHYIRCVKPNN L+PAIFEN N+IQQLRCGGVLEAIRISC
Sbjct: 619 IGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENVNVIQQLRCGGVLEAIRISC 678
Query: 665 AGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLRAGQM 724
AGYPT+RTFYEFL+RFGVLAP+VL+GNYDDKVAC+ +LDK+GLKGY++GKTKVFLRAGQM
Sbjct: 679 AGYPTKRTFYEFLNRFGVLAPEVLEGNYDDKVACKMLLDKIGLKGYELGKTKVFLRAGQM 738
Query: 725 AELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRRE 784
AELDARRAEVLGNAAR IQRQ RT+IA KEF ALR AAIVLQS RG LAC LYE++RR+
Sbjct: 739 AELDARRAEVLGNAARRIQRQSRTFIACKEFRALRGAAIVLQSNCRGKLACNLYEEMRRQ 798
Query: 785 AAALKIQKNFHSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEAYLRR 844
AAA+KIQK F + AR SYL R S I +QT LR MVARNEFRFRKQ KAA II+A LR
Sbjct: 799 AAAVKIQKIFRRHIARESYLRIRHSTITVQTALRGMVARNEFRFRKQMKAATIIQARLRS 858
Query: 845 HTACSYYKSLKKAAVITQCGWXXXXXXXXXXNLKMAARETGALKEAKDKLEKRVEELTWR 904
H SYYK L+KAA+ TQCGW LKMAAR+TGAL+EAKDKLEKRVEELTWR
Sbjct: 859 HLTHSYYKQLQKAALSTQCGWRSRVARKELRTLKMAARDTGALREAKDKLEKRVEELTWR 918
Query: 905 LQFEKQLRTNLEEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAARKAIEEAPPIVKE 964
LQ EK+ RT LEE K QE AK Q+AL+ M+LQVEEAN +++E+EAARKAIEEAPP++KE
Sbjct: 919 LQLEKRQRTELEEAKTQEYAKQQEALETMRLQVEEANAAVIREREAARKAIEEAPPVIKE 978
Query: 965 TPVIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDTEEKV 1024
TPV+V DTEKI SLT+EV++LKA L +ERQ+AE RKA +AE RN+EL +LE+ K
Sbjct: 979 TPVLVEDTEKINSLTSEVEALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKA 1038
Query: 1025 GQLQESMQRLEEKLCNSESENQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNVQNGE 1084
QL ES+QRLEEKL NSESE QV+RQQALA+SPT ++++ R KT+++ RTPENGN NG
Sbjct: 1039 DQLHESVQRLEEKLSNSESEIQVLRQQALAISPTSRTMATRSKTMLLPRTPENGNYLNGG 1098
Query: 1085 MK---DVTLAVTSAREPESEEKPQKSLNEKQQENQDLLIKCVSQNLGFSRSKPVAASVIY 1141
K D+TLAV REPESEEKPQK LNEKQQENQDLL+KC+SQNLG++ KPVAA VIY
Sbjct: 1099 TKTTPDMTLAV---REPESEEKPQKHLNEKQQENQDLLVKCISQNLGYNGDKPVAACVIY 1155
Query: 1142 KCLLHWRSFEVERTTVFDRIIQTIASAIEVQDNNDVLAYWXXXXXXXXXXXQHTLKASGA 1201
KCLLHWRSFEVERT+VFDRIIQTIA+AIEV DNN+VLAYW Q TLKA+GA
Sbjct: 1156 KCLLHWRSFEVERTSVFDRIIQTIATAIEVPDNNEVLAYWLSNSATLLLLLQRTLKATGA 1215
Query: 1202 ASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNXXXXXXXXXXXQVEAKYPALLFKQ 1261
ASLTPQRRRTTSASLFGRMSQGLR SPQSAGLSFLN QVEAKYPALLFKQ
Sbjct: 1216 ASLTPQRRRTTSASLFGRMSQGLRGSPQSAGLSFLNRQGLTKLDDLRQVEAKYPALLFKQ 1275
Query: 1262 QLTAFLEKIYGMIRDNLKKDISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALIAHWQS 1321
QLTAFLEKIYGMIRDNLKK+ISPLLGLCIQAPRTSRASLVKGR+QANAVAQQALIAHWQS
Sbjct: 1276 QLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRAQANAVAQQALIAHWQS 1335
Query: 1322 IVKSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGL 1381
I KSLNSYL MK N PPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGL
Sbjct: 1336 IRKSLNSYLNLMKANNAPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGL 1395
Query: 1382 AELEQWCYDATEEYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSIQQLYR 1441
AELEQWC +AT+EYAGSAWDEL+HIRQAVGFLVI+QKPKKTL+EIT+ELCPVLSIQQLYR
Sbjct: 1396 AELEQWCIEATDEYAGSAWDELRHIRQAVGFLVIHQKPKKTLDEITRELCPVLSIQQLYR 1455
Query: 1442 ISTMYWDDKYGTHSVSSEVISSMRVLMTEDSNNAVXXXXXXXXXXXIPFTVDDISKSLQQ 1501
ISTMYWDDKYGTHSVSS+VI++MRV+MTEDSNNAV IPFTV+DISKS+QQ
Sbjct: 1456 ISTMYWDDKYGTHSVSSDVIANMRVMMTEDSNNAVSSSFLLDDDSSIPFTVEDISKSMQQ 1515
Query: 1502 VDIADVEPPAVIRENSGFGFLLPRTE 1527
VD+ D+EPP +IRENSGFGFLL R E
Sbjct: 1516 VDVNDIEPPQLIRENSGFGFLLTRKE 1541
|
|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045198 XIF "myosin-like protein XIF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039007 XIG "myosin-like protein XIG" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046570 XID "myosin XI D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1527 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 0.0 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 0.0 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-177 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-176 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-165 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 8e-74 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 2e-41 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 3e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 4e-08 | |
| pfam02736 | 42 | pfam02736, Myosin_N, Myosin N-terminal SH3-like do | 2e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 7e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-06 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-05 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 2e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-05 | |
| TIGR00618 | 1042 | TIGR00618, sbcc, exonuclease SbcC | 3e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-05 | |
| pfam13868 | 349 | pfam13868, Trichoplein, Tumour suppressor, Mitosta | 1e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 2e-04 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 2e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 3e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 6e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-04 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 6e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.001 | |
| TIGR02473 | 141 | TIGR02473, flagell_FliJ, flagellar export protein | 0.001 | |
| COG4477 | 570 | COG4477, EzrA, Negative regulator of septation rin | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.002 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 0.002 | |
| pfam00261 | 237 | pfam00261, Tropomyosin, Tropomyosin | 0.002 | |
| PRK04778 | 569 | PRK04778, PRK04778, septation ring formation regul | 0.003 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.004 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.004 | |
| pfam05701 | 484 | pfam05701, DUF827, Plant protein of unknown functi | 0.004 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1461 bits (3783), Expect = 0.0
Identities = 588/674 (87%), Positives = 623/674 (92%)
Query: 62 GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYK 121
GVDDMTKLSYLHEPGVL NL RYELNEIYTYTGNILIA+NPFQRLPHLYD HMMEQYK
Sbjct: 1 EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYK 60
Query: 122 GAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG 181
GA GELSPHVFAIAD AYRAMINEGKS SILVSGESGAGKTETTKMLMRYLAY+GGR+G
Sbjct: 61 GAALGELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAG 120
Query: 182 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVE+QFD GRISGAA+RTYLLER
Sbjct: 121 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLER 180
Query: 242 SRVCQISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLA 301
SRVCQISDPERNYHCFY LCAAPPE +K+KLGDPK FHYLNQSNC+ LDGVDD EEYLA
Sbjct: 181 SRVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLA 240
Query: 302 TRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELL 361
TRRAMD+VGISEEEQDAIFRVVAAILHLGNIEFAKGEE DSSV+KDEKS FHL T AELL
Sbjct: 241 TRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELL 300
Query: 362 KCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIG 421
CD K+LEDAL RVMVTPEEVIT+ LDP +A SRDALAKT+YSRLFDWLV+KINSSIG
Sbjct: 301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIG 360
Query: 422 QDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 481
QDP+S+++IGVLDIYGFESFK NSFEQFCIN TNEKLQQHFNQHVFKMEQEEYTKEEI+W
Sbjct: 361 QDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDW 420
Query: 482 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLS 541
SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFK +KRF KPKLS
Sbjct: 421 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLS 480
Query: 542 RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSK 601
RT+FTI HYAG+VTY D FLDKNKDYVVAEHQ LL AS C FV+GLFPPLPEE+SKSSK
Sbjct: 481 RTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSK 540
Query: 602 FSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIR 661
FSSIGSRFK QLQSLMETL++TEPHYIRC+KPNN L+P IFEN N++QQLRCGGVLEAIR
Sbjct: 541 FSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIR 600
Query: 662 ISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGLKGYQIGKTKVFLRA 721
ISCAGYPTRRTF EFL RFG+LAP+VL G+ DDK AC+KILDKMGLKGYQIGKTKVFLRA
Sbjct: 601 ISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLRA 660
Query: 722 GQMAELDARRAEVL 735
GQMAELDARR EVL
Sbjct: 661 GQMAELDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|111612 pfam02736, Myosin_N, Myosin N-terminal SH3-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|129705 TIGR00618, sbcc, exonuclease SbcC | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|206039 pfam13868, Trichoplein, Tumour suppressor, Mitostatin | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|131526 TIGR02473, flagell_FliJ, flagellar export protein FliJ | Back alignment and domain information |
|---|
| >gnl|CDD|226883 COG4477, EzrA, Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|189476 pfam00261, Tropomyosin, Tropomyosin | Back alignment and domain information |
|---|
| >gnl|CDD|179877 PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|218704 pfam05701, DUF827, Plant protein of unknown function (DUF827) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1527 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.93 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 99.9 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.4 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.71 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.41 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.37 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.28 | |
| PF02736 | 42 | Myosin_N: Myosin N-terminal SH3-like domain; Inter | 98.13 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.97 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.38 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.32 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.21 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.19 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.12 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 97.02 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.01 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 96.99 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.99 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.95 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.84 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.74 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.66 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.64 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.59 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.58 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.47 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.45 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.45 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 96.44 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.43 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.41 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.37 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.16 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.09 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.05 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 95.97 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 95.87 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 95.87 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 95.76 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 95.74 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 95.68 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.6 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 95.47 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 95.47 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 95.45 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 95.45 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 95.38 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.34 | |
| PTZ00014 | 821 | myosin-A; Provisional | 95.28 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 95.27 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 95.26 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.13 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.12 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 95.07 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 94.99 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 94.99 | |
| PRK09039 | 343 | hypothetical protein; Validated | 94.97 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 94.93 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 94.92 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 94.89 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 94.83 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 94.7 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.69 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 94.55 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 94.54 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.45 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.2 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 94.03 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 93.98 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 93.95 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 93.83 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 93.64 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 93.43 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 93.4 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 93.39 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 93.33 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 93.19 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 93.18 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 93.14 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 93.1 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 93.08 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 93.04 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.02 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 93.01 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 92.95 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 92.88 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 92.87 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 92.86 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 92.84 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 92.83 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 92.82 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 92.82 | |
| PRK09039 | 343 | hypothetical protein; Validated | 92.79 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 92.65 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 92.62 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 92.57 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.38 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 92.38 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 92.19 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 92.14 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 92.14 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 92.05 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 92.0 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 91.82 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 91.82 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 91.78 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 91.78 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 91.7 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 91.69 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 91.67 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 91.63 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 91.56 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 91.56 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 91.38 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 91.2 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 91.18 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 91.09 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 90.92 | |
| PRK06696 | 223 | uridine kinase; Validated | 90.91 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 90.76 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 90.73 | |
| PRK07196 | 434 | fliI flagellum-specific ATP synthase; Validated | 90.58 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 90.57 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 90.53 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 90.39 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 90.37 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 90.31 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 90.26 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 90.21 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 90.16 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 90.12 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 90.11 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 90.09 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 90.01 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 89.92 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 89.73 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 89.73 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 89.71 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 89.65 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 89.62 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 89.6 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 89.5 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 89.42 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 89.42 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 89.24 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 89.17 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 89.15 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 89.11 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 88.97 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 88.97 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 88.94 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 88.92 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 88.83 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 88.78 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 88.73 | |
| PRK08972 | 444 | fliI flagellum-specific ATP synthase; Validated | 88.68 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 88.59 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 88.49 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 88.45 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 88.39 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 88.36 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 88.26 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 88.21 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 88.15 | |
| KOG4403 | 575 | consensus Cell surface glycoprotein STIM, contains | 88.12 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 88.1 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 88.08 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 88.04 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 88.02 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 88.0 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 87.93 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 87.85 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 87.85 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 87.76 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 87.72 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 87.64 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 87.64 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 87.62 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 87.62 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 87.53 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 87.53 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 87.37 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 87.28 | |
| PF05729 | 166 | NACHT: NACHT domain | 87.28 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 87.18 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 87.16 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 87.15 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 87.06 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 87.02 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 86.98 | |
| KOG2891 | 445 | consensus Surface glycoprotein [General function p | 86.98 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 86.97 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 86.89 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 86.86 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 86.85 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 86.76 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 86.71 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 86.7 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 86.61 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 86.61 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 86.55 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 86.53 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 86.46 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 86.44 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 86.4 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 86.35 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 86.32 | |
| PRK06315 | 442 | type III secretion system ATPase; Provisional | 86.31 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 86.27 | |
| PRK08472 | 434 | fliI flagellum-specific ATP synthase; Validated | 86.26 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 86.25 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 86.15 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 86.08 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 86.08 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 86.01 | |
| PRK09099 | 441 | type III secretion system ATPase; Provisional | 85.94 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 85.92 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 85.88 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 85.84 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 85.79 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 85.71 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 85.51 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 85.49 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 85.49 | |
| PRK06217 | 183 | hypothetical protein; Validated | 85.47 | |
| PTZ00121 | 2084 | MAEBL; Provisional | 85.44 | |
| PRK12377 | 248 | putative replication protein; Provisional | 85.44 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 85.43 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 85.43 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 85.4 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 85.25 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 85.19 | |
| PF08826 | 61 | DMPK_coil: DMPK coiled coil domain like; InterPro: | 85.13 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 85.11 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 85.09 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 84.98 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 84.87 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 84.86 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 84.85 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 84.84 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 84.77 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 84.55 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 84.55 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 84.53 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 84.5 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 84.48 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 84.42 | |
| PRK07721 | 438 | fliI flagellum-specific ATP synthase; Validated | 84.4 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 84.32 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 84.29 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 84.25 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 84.04 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 83.91 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 83.87 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 83.74 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 83.59 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 83.49 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 83.45 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 83.37 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 83.26 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 83.12 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 83.04 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 82.99 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 82.95 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 82.94 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 82.91 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 82.85 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 82.83 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 82.79 | |
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 82.77 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 82.76 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 82.76 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 82.74 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 82.63 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 82.59 | |
| PRK13764 | 602 | ATPase; Provisional | 82.49 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 82.48 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 82.38 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 82.32 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 82.31 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 82.28 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 82.23 | |
| PRK07667 | 193 | uridine kinase; Provisional | 82.21 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 82.18 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 82.17 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 82.12 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 82.1 | |
| KOG4460 | 741 | consensus Nuclear pore complex, Nup88/rNup84 compo | 81.99 | |
| PRK14955 | 397 | DNA polymerase III subunits gamma and tau; Provisi | 81.88 | |
| PF09465 | 55 | LBR_tudor: Lamin-B receptor of TUDOR domain; Inter | 81.86 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 81.81 | |
| COG1382 | 119 | GimC Prefoldin, chaperonin cofactor [Posttranslati | 81.77 | |
| PRK06002 | 450 | fliI flagellum-specific ATP synthase; Validated | 81.77 | |
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 81.75 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 81.73 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 81.64 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 81.62 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 81.57 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 81.57 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 81.54 | |
| smart00333 | 57 | TUDOR Tudor domain. Domain of unknown function pre | 81.52 | |
| TIGR02546 | 422 | III_secr_ATP type III secretion apparatus H+-trans | 81.49 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 81.45 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 81.35 | |
| PRK14969 | 527 | DNA polymerase III subunits gamma and tau; Provisi | 81.34 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 81.28 | |
| PF03215 | 519 | Rad17: Rad17 cell cycle checkpoint protein | 81.27 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 81.18 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 81.17 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 81.16 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 81.14 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 81.08 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 81.07 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 81.07 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 80.92 | |
| TIGR00064 | 272 | ftsY signal recognition particle-docking protein F | 80.88 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 80.8 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 80.79 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 80.78 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 80.78 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 80.68 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 80.65 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 80.57 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 80.57 | |
| PRK14959 | 624 | DNA polymerase III subunits gamma and tau; Provisi | 80.55 | |
| PRK04195 | 482 | replication factor C large subunit; Provisional | 80.51 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 80.45 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 80.45 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 80.41 | |
| PRK08727 | 233 | hypothetical protein; Validated | 80.38 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 80.38 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 80.35 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 80.32 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 80.29 | |
| PRK14963 | 504 | DNA polymerase III subunits gamma and tau; Provisi | 80.28 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 80.27 | |
| KOG0056 | 790 | consensus Heavy metal exporter HMT1, ABC superfami | 80.25 | |
| PRK14958 | 509 | DNA polymerase III subunits gamma and tau; Provisi | 80.22 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 80.15 | |
| PF00625 | 183 | Guanylate_kin: Guanylate kinase; InterPro: IPR0081 | 80.11 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 80.11 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-243 Score=2255.58 Aligned_cols=1366 Identities=34% Similarity=0.525 Sum_probs=1057.3
Q ss_pred CccccccCcEEEEeCCCCCeEeEEEEEec--CCeEEEE--eCCCcEEEEeCCcccC--CCCCCCCCCcCccccCCCCChH
Q 000423 3 APVNIIVGSHVWVEHPELAWVDGEVFKIS--AEEVHVH--TTNGQTVITNISKVFP--KDTEAPPGGVDDMTKLSYLHEP 76 (1527)
Q Consensus 3 ~~~~~~~g~~vwv~~~~~~w~~~~v~~~~--~~~~~v~--~~~g~~~~~~~~~~~~--~~~~~~~~~~~Dl~~L~~l~E~ 76 (1527)
+..++.+|..||+||.+.+|+.|.|.+.+ ++.++.. ..+|..+.++...+-. .++| ..+++||||.|+|||||
T Consensus 2 ~~~~~~~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~P-~~~~vdDLt~LSyLNEp 80 (1463)
T COG5022 2 STTNAEVGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVLGNDRIKLP-KFDGVDDLTELSYLNEP 80 (1463)
T ss_pred CccccccCceeeeeccccceeeeeechhhhhccccccchhhccCcccceeehhcccccccCc-cccCchhhhhhhccCcH
Confidence 34578999999999999999999999743 3333322 2455444444432221 1111 35899999999999999
Q ss_pred HHHHHHHHhhccCccccccCCeeEEeCCCCCCCCCCCHHHHHHhhccCcCCCCchHHHHHHHHHHHHHhcCCCeEEEecC
Q 000423 77 GVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSG 156 (1527)
Q Consensus 77 ~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~lY~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~~~~~QsIiisG 156 (1527)
+|||||++||.+++||||+|.||||||||+.|| ||++++|+.|++++..+++|||||||++||+.|...++||||||||
T Consensus 81 sVl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISG 159 (1463)
T COG5022 81 AVLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISG 159 (1463)
T ss_pred HHHHHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHHHHHHhcCCCceEEEec
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred CCCCChhhhHHHHHHHHHHhcCCCCCCCccHHHHHHhcchHHhhccCCcccCCCCCCCcceEEEEEecCCCCccceeEEe
Q 000423 157 ESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRT 236 (1527)
Q Consensus 157 ESGaGKTes~k~im~yla~~~~~~~~~~~~ie~~il~snpiLEaFGNAkT~rN~NSSRfGk~~~l~f~~~g~i~Ga~i~t 236 (1527)
||||||||+||+||+|||++++.++....+||++||++||||||||||||+|||||||||||++|.||.+|.|+||+|+|
T Consensus 160 ESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~ 239 (1463)
T COG5022 160 ESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIET 239 (1463)
T ss_pred CCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCCCceechhhhh
Confidence 99999999999999999999987776677999999999999999999999999999999999999999999999999999
Q ss_pred eeccCccccccCCCCccceeehhcccC-ChhHHhhcCCCCCCCCccccCCCccccCCCCcHHHHHHHHhchhhccCCHHH
Q 000423 237 YLLERSRVCQISDPERNYHCFYLLCAA-PPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEE 315 (1527)
Q Consensus 237 yLLEksRvv~q~~~ERnfHIFYql~~~-~~~~~~~l~L~~~~~f~yl~~~~~~~~~~~dd~~~f~~~~~Al~~lg~~~~e 315 (1527)
|||||||||+|+.+|||||||||||++ ++..++.+++..|.+|+||++|+|..++||||+++|..|+.||+++||+.++
T Consensus 240 YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~ee 319 (1463)
T COG5022 240 YLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEE 319 (1463)
T ss_pred hhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHH
Confidence 999999999999999999999999995 5555566777899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCeeEEecCCCCccccccccchHHHHHHHHhcCCCHHHHHHHHhhceeeeCCceEeccCChhhHhh
Q 000423 316 QDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVG 395 (1527)
Q Consensus 316 ~~~i~~ilaaILhLGni~f~~~~~~d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L~~r~~~~~~e~~~~~l~~~~a~~ 395 (1527)
|..||+|||||||||||+|..+++ +.+.+.+. ..++.||.|||||+..|.+||++|.|.+++|.|.+|++..||..
T Consensus 320 q~~IF~iLAaILhiGNIef~~~r~-g~a~~~~~---~~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~ 395 (1463)
T COG5022 320 QDQIFKILAAILHIGNIEFKEDRN-GAAIFSDN---SVLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALA 395 (1463)
T ss_pred HHHHHHHHHHHHhhcceeeeeccc-chhhcCCc---hHHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHH
Confidence 999999999999999999998664 44444443 36999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcccccCCCCCeEEEEecccccccCCCCchhhhhhhhhhhHHhhhhhhhhhhhhHHHhh
Q 000423 396 SRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYT 475 (1527)
Q Consensus 396 ~rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfEQlcINyaNEkLqq~f~~~vf~~eq~eY~ 475 (1527)
+||||||+||++||+|||++||.+|..++...+|||||||||||+|+.|||||||||||||||||+||+|||++|||||.
T Consensus 396 irdslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~ 475 (1463)
T COG5022 396 IRDSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYV 475 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877778999999999999999999999999999999999999999999999999
Q ss_pred hcCCccccccccChHHHHHHhhc-CCCcccccchhhccCCCCchHHHHHHHHHHhc--CCCCccCCCCCCCceEEEeccc
Q 000423 476 KEEINWSYIEFVDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHETFAQKLYQTFK--SNKRFIKPKLSRTSFTISHYAG 552 (1527)
Q Consensus 476 ~EgI~w~~i~f~dn~~~idlie~-~~~Gil~lLdee~~~p~~td~~f~~kl~~~~~--~~~~f~~p~~~~~~F~I~Hyag 552 (1527)
+|||+|++|+|.|||+||||||+ .|.|||++|||||++|.|||++|.+||++.+. +++.|.+||+....|+|+||||
T Consensus 476 kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAg 555 (1463)
T COG5022 476 KEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAG 555 (1463)
T ss_pred HhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeecc
Confidence 99999999999999999999997 35699999999999999999999999999986 5688999999999999999999
Q ss_pred eeeeechhhhhhccccchHHHHHHHhhCCchhhhhcCCCCcccccCCCCCccchHHHHHHHHHHHHHHccCCCeeeeecC
Q 000423 553 EVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVK 632 (1527)
Q Consensus 553 ~V~Y~~~gfleKN~D~~~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~tv~~~f~~~L~~Lm~~l~~t~~hfIrCIk 632 (1527)
+|+|+++||++||||++++++++|+.+|+|+||+.||+...... +.++++|+|++||.||++||++|++|+||||||||
T Consensus 556 DVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~-~K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIk 634 (1463)
T COG5022 556 DVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENIE-SKGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIK 634 (1463)
T ss_pred cceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhcc-ccCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeC
Confidence 99999999999999999999999999999999999999544333 34688999999999999999999999999999999
Q ss_pred CCCCCCCCcCchhHHHHHhhccchhHHHHHHhhcCCcccchHHHHhhhccccccccCC-----CCchHHHHHHHHhhcCC
Q 000423 633 PNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDG-----NYDDKVACEKILDKMGL 707 (1527)
Q Consensus 633 PN~~k~p~~fd~~~v~~QLr~~gvle~iri~~~Gyp~r~~~~~F~~ry~~l~~~~~~~-----~~~~~~~~~~il~~~~~ 707 (1527)
||..|+|+.||+.+|++|||||||||+|||+|+|||+||+|+||+.||++|.|..... ..|.+.+|+.||..+.+
T Consensus 635 PN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~i 714 (1463)
T COG5022 635 PNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELVI 714 (1463)
T ss_pred CCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999974321 24679999999999877
Q ss_pred C--CceecceEEeeccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Q 000423 708 K--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREA 785 (1527)
Q Consensus 708 ~--~~~~G~TkVF~r~~~~~~LE~~R~~~l~~aa~~IQk~~R~~l~Rk~y~~~r~aai~IQ~~~Rg~laRk~~~~~r~~~ 785 (1527)
+ .||+|+||||||+|+++.||++|...++.+++.||+.|||++.|++|.+..+.+..+|...+|++.|+.+..--...
T Consensus 715 d~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~ 794 (1463)
T COG5022 715 DSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWR 794 (1463)
T ss_pred ChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHH
Confidence 6 59999999999999999999999999999999999999999999999999999999999999999998887666677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000423 786 AALKIQKNFHSYTARTSYLTARSSAIQLQ-TGLRAMVARNEFRFRKQTKAAIIIEAYLRRHTACSYYKSLKKAAVITQCG 864 (1527)
Q Consensus 786 AAi~IQ~~~R~~~~Rr~y~~~r~a~i~IQ-s~~Rg~~aRr~l~~lr~~~AA~~IQ~~~R~~~~r~~y~~l~ka~i~iQ~~ 864 (1527)
+++++|..||....|+.|......++.+| ..+|....+...+.....++++.+|+.||....+++|..+.+.++.+|+.
T Consensus 795 ~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~ 874 (1463)
T COG5022 795 LFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSA 874 (1463)
T ss_pred hHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHH
Confidence 99999999999999999999999999999 66666666666677777899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000423 865 WRRRVARRELRNLKMAARETGALKEAKDKLEKRVEELTWRLQFEKQLRTNLEEEKAQEIAKLQDALQAMQLQVEEANFRI 944 (1527)
Q Consensus 865 ~R~~~arkel~~Lk~~a~e~~~L~~~~~~LE~kv~eL~~~l~~e~~~~~~le~~k~~e~~~Lq~~~eeLe~qlee~~~~l 944 (1527)
+|...|++.+..++.+.+++.++...+.+|+.++.++...++.......... .+....++..++..
T Consensus 875 ~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~~~~~~k---~e~~a~lk~~l~~~----------- 940 (1463)
T COG5022 875 QRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFK---TELIARLKKLLNNI----------- 940 (1463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhhhhhHHH---HHHHHHHHHHhhcc-----------
Confidence 9999999999999999999999999999999999999887664221111111 11112222211110
Q ss_pred HHHHHHHHHHHHhCCCccccccccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHhhHHHHHHHHHHHHH
Q 000423 945 LKEQEAARKAIEEAPPIVKETPVIV-HDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDTEEK 1023 (1527)
Q Consensus 945 ~~E~e~~~~~~ee~~~~~~e~~~l~-~~~~~~~~L~~E~~~Lk~~l~~le~~~~~le~~~~e~~~~~~~l~~~L~~~e~e 1023 (1527)
.+ ++.+..+ .....+..|..+..+|+....+...-+...+....+..+. ..++....++
T Consensus 941 ---------d~-------~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~----~~el~~~~~~ 1000 (1463)
T COG5022 941 ---------DL-------EEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKA----NSELKNFKKE 1000 (1463)
T ss_pred ---------cc-------cchhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcccH----HHHHHHHHHH
Confidence 00 0000000 0111344555555555443332222222111111111111 1112222222
Q ss_pred HHHHHHHHHHHHHHHHhHHHH---HHHHHHHHhhcCCCCcccccCCcccccccCCCCCCCCCCCcccchhccccCCCCCc
Q 000423 1024 VGQLQESMQRLEEKLCNSESE---NQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNVQNGEMKDVTLAVTSAREPES 1100 (1527)
Q Consensus 1024 ~~~L~~~~~~Leeki~~le~e---n~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1527)
+.........+.++...++.. +..+....-.. +..............+..... ........+..
T Consensus 1001 l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~----~s~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~------- 1067 (1463)
T COG5022 1001 LAELSKQYGALQESTKQLKELPVEVAELQSASKII----SSESTELSILKPLQKLKGLLL--LENNQLQARYK------- 1067 (1463)
T ss_pred HHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhh----ccchhhhhccCcccchhhhhh--HHHHHhhhhHh-------
Confidence 222222222222222222221 22221111000 000000000000000000000 00000000000
Q ss_pred cccccc---chhHH---hhhhhHHHHHhhc-cCCCCCCC-ccchHH-HHHHHHhhhhh-hhhhhhHHHHHHHHHHHHHHh
Q 000423 1101 EEKPQK---SLNEK---QQENQDLLIKCVS-QNLGFSRS-KPVAAS-VIYKCLLHWRS-FEVERTTVFDRIIQTIASAIE 1170 (1527)
Q Consensus 1101 ~~~~~~---~l~e~---~~e~~d~Li~~l~-~~~gf~~~-kp~~A~-iif~cl~~w~~-~~~e~~~l~~~ii~~I~~~i~ 1170 (1527)
.....+ ...+. +.+....+.+.+. +++-..+. -+-||. +.+...-+|++ ...+...++...+..+..+..
T Consensus 1068 ~l~~~r~~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~le~~~~ 1147 (1463)
T COG5022 1068 ALKLRRENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPVFQ 1147 (1463)
T ss_pred hhhhcCcccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchhhHHHHHHHHhhccchHHhhhhHHHHHHhhccchhc
Confidence 000000 11111 1122222333222 22222111 111333 33555567776 444555566665666555544
Q ss_pred c---cCCcccceehhhhHHHHHHHHHHHhhhcCCCCCCccccccccchhhhcccccccCCCCCCCcccccCCccCccchh
Q 000423 1171 V---QDNNDVLAYWLSNSSTLLLLLQHTLKASGAASLTPQRRRTTSASLFGRMSQGLRASPQSAGLSFLNGRGLGRLDDL 1247 (1527)
Q Consensus 1171 ~---~~~~~~layWLSN~~~Ll~llq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1247 (1527)
. .+-.-.+.||.+|...+++.--- ..+.+.+-.. +..+.+.+ .+..+++
T Consensus 1148 ~~~~~~~~~d~~~~~~~~~~~~~~~~~-------~~~~~~~~~~------------------~~~~d~~~---~~s~s~v 1199 (1463)
T COG5022 1148 KLSVLQLELDGLFWEANLEALPSPPPF-------AALSEKRLYQ------------------SALYDEKS---KLSSSEV 1199 (1463)
T ss_pred cccchhccccccccccccccCCCCCch-------hhcchhhhhH------------------hhhhcccc---cccHHHH
Confidence 2 33334668999999987631000 0000000000 00010000 0011111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhcchhhhhhcc--CCCCcccccccCCCcchhhhhhhhhhhHHHHHHH
Q 000423 1248 RQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKDISPLLGLCIQ--APRTSRASLVKGRSQANAVAQQALIAHWQSIVKS 1325 (1527)
Q Consensus 1248 ~~v~~~~p~~~fkqqL~~l~~kiy~~l~~~~~k~l~p~L~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~~ 1325 (1527)
...+..+..+..++|..|.... ++.+++...+- ......+++. .++..+..+...+.++++.+
T Consensus 1200 ---------~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ll~~ 1264 (1463)
T COG5022 1200 ---------NDLKNELIALFSKIFSGWPRGD--KLKKLISEGWVPTEYSTSLKGFN----NLNKKFDTPASMSNEKLLSL 1264 (1463)
T ss_pred ---------HHHHHHHHHHHHhccccchhhh--hhhhhhhhccchhhhcccccccc----chhhcccCcccCcHHHHHHH
Confidence 1335778888888999887654 23333321110 0011111111 11122233455678899999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHhhhHHHhHhhhccCCCCCccchhHHhhchHHHHHHHhhcccccccchHhHhHh
Q 000423 1326 LNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEQWCYDATEEYAGSAWDELKH 1405 (1527)
Q Consensus 1326 L~~~~~~l~~~~v~~~li~q~f~Qlf~~Ina~lfN~LLlRr~~Cs~s~G~qIr~nls~LE~W~~~~~~~~~~~a~~~L~~ 1405 (1527)
++.+++.++.+.+.+.+....++++..++|+.+||.|..|+.-.+|+.|.++.+|.+.+++||+.++ ...+..+|++
T Consensus 1265 ~n~i~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~~~~---i~~~~~~l~~ 1341 (1463)
T COG5022 1265 LNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFE---ISDVDEELEE 1341 (1463)
T ss_pred HHHHHHHHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHHhhc---ccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 4566689999
Q ss_pred HHHHHHHHhccCCCcCCHHHHHhccCCCCCHHHHHHHHhcCccCCCCCccCcHHHHHHHHhhhhc
Q 000423 1406 IRQAVGFLVINQKPKKTLNEITKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVLMTE 1470 (1527)
Q Consensus 1406 i~QA~~lLq~~kk~~~~~~~i~~~~C~~Ls~~QI~kIl~~Y~~d~~e~~~Vs~~~i~~v~~~~~~ 1470 (1527)
++||++.+++.++....++++ .+.|.+|+|.||.+|+.+|.+.+++ .++|.+|..+|-.....
T Consensus 1342 l~q~~k~~~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ke~~~~~~a~~~~ 1404 (1463)
T COG5022 1342 LIQAVKVLQLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLPKEILKKIEALLIK 1404 (1463)
T ss_pred HHhhhhhhhhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCChHHHHHHHhhhhhH
Confidence 999999999987777777667 6999999999999999999999998 59999999777555443
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK07196 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08972 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >KOG2891 consensus Surface glycoprotein [General function prediction only] | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >PRK06315 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK08472 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK09099 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK07721 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK14955 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF09465 LBR_tudor: Lamin-B receptor of TUDOR domain; InterPro: IPR019023 The Lamin-B receptor is a chromatin and lamin binding protein in the inner nuclear membrane | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK06002 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >smart00333 TUDOR Tudor domain | Back alignment and domain information |
|---|
| >TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >PRK14969 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF03215 Rad17: Rad17 cell cycle checkpoint protein | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >TIGR00064 ftsY signal recognition particle-docking protein FtsY | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >PRK14959 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK04195 replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >PRK14963 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14958 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1527 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 0.0 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 0.0 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 0.0 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 0.0 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 0.0 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 0.0 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 0.0 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 0.0 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 0.0 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 0.0 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 0.0 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 0.0 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 0.0 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-180 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-180 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-180 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-180 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-180 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-180 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-179 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-178 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-178 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-178 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-177 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-173 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-171 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-169 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-152 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-151 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-151 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-150 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-150 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-150 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-150 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-150 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-150 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 1e-150 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 1e-150 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-148 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-147 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-147 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-147 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-147 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-147 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-147 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-146 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-146 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 1e-142 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-141 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-141 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-141 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 1e-141 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-139 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-136 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-135 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-134 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-133 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-132 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-132 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-132 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1333 bits (3452), Expect = 0.0
Identities = 416/1121 (37%), Positives = 597/1121 (53%), Gaps = 81/1121 (7%)
Query: 1 MAAPVNIIVGSHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAP 60
MAA + VW+ PE W E+ K V + + PK E P
Sbjct: 1 MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP 60
Query: 61 PG-------GVDDMTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLPHLY 112
P G +D+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP +Y
Sbjct: 61 PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IY 119
Query: 113 DTHMMEQYKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRY 172
++ Y G G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K MRY
Sbjct: 120 GEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRY 179
Query: 173 LAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGA 232
A + G + VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI GA
Sbjct: 180 FATVSGSAS--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGA 237
Query: 233 AVRTYLLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKSFHYLNQSNCYALD 291
+RTYLLE+SRV ++ ERNYH FY LCA A + +LG+ FHY Q +D
Sbjct: 238 NMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVID 297
Query: 292 GVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSR 351
G+DD +E + TR+A ++GIS+ Q IFR++A ILHLGN+EFA + ++
Sbjct: 298 GIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHD-- 355
Query: 352 FHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
L +L+ D + + L +R + T E + + + A+ +RDALAK +Y+ LF+W
Sbjct: 356 -PLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNW 414
Query: 412 LVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQ 471
+VD +N ++ + IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVFK+EQ
Sbjct: 415 IVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ 474
Query: 472 EEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTF-K 530
EEY KE+I W+ I+F DNQ ++LIE K G ++ LLDE C PK + +T+AQKLY T
Sbjct: 475 EEYMKEQIPWTLIDFYDNQPCINLIEAKMG-VLDLLDEECKMPKGSDDTWAQKLYNTHLN 533
Query: 531 SNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK-CPFVSGLF 589
F KP+LS +F I H+A +V Y + FL+KNKD V E +L +SK + LF
Sbjct: 534 KCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELF 593
Query: 590 PPLPEESS---------------------------KSSKFSSIGSRFKLQLQSLMETLNS 622
+ S ++G +F+ L LMETLN+
Sbjct: 594 QDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNA 653
Query: 623 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 682
T PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF R+ V
Sbjct: 654 TTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRV 713
Query: 683 LAPDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAEVLGNAAR 740
L D D K C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+ L A
Sbjct: 714 LMKQK-DVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACI 772
Query: 741 IIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAAALKIQKNFHSYTAR 800
IQ+ IR ++ RK+++ +R+AAI +Q Y RG A LRR AA+ IQK Y R
Sbjct: 773 RIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVR 832
Query: 801 TSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEAYLRRHTACSYYKSLKKAAVI 860
Y R + I LQ LR + RN+++ + +III+ ++R A +Y KA V
Sbjct: 833 KRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVY 892
Query: 861 TQCGWRRRVARRELRNLKMAARETGALKEAKDKLEKRVEELTWRLQFEKQLRTNLEEEKA 920
QC +RR +A+REL+ LK+ AR K+ LE ++ +L ++ + + +L E+
Sbjct: 893 LQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMN 952
Query: 921 QEIAKLQDALQAMQLQVEEANFRILKEQEAARKAIEEAPPIVKETPVIVHDTEKIESLTA 980
+ ++ VE L+ E K ++ SL
Sbjct: 953 NLEITYSTETEKLRSDVER-----LRMSEEEAKNATN----------------RVLSLQE 991
Query: 981 EVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDTEEKVGQLQESMQRLEEKLCN 1040
E+ L+ L + + E + + E + L+E L+ +
Sbjct: 992 EIAKLRKEL-------HQTQTEKKTIEEWADKYKHETEQLVSE---LKEQNTLLKTE--K 1039
Query: 1041 SESENQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNVQ 1081
E ++ Q K L K L + E Q
Sbjct: 1040 EELNRRIHDQAKEITETMEKKLVEETKQLELDLNDERLRYQ 1080
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 154 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129 | Back alignment and structure |
|---|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
| >2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 135 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1527 | ||||
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 5e-04 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.001 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 0.0 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d2ap3a1 | 185 | a.24.27.1 (A:12-196) Hypothetical protein MW0975 ( | 3e-04 | |
| d1w7ja1 | 58 | b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal d | 6e-04 | |
| d2es4d1 | 280 | a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) | 0.001 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 804 bits (2078), Expect = 0.0
Identities = 292/776 (37%), Positives = 440/776 (56%), Gaps = 38/776 (4%)
Query: 41 NGQTVITNISKVFPKDTEA---PP--GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYT 95
+ Q + + K+ + T A PP ++DM ++YL+E VL+NL +RY IYTY+
Sbjct: 9 DFQYLAVDRKKLMKEQTAAFMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYS 68
Query: 96 GNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVS 155
G IA+NP++RLP +Y ++ +Y+G + E+ PH+F++AD AY+ M+ + ++ S L++
Sbjct: 69 GLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLIT 127
Query: 156 GESGAGKTETTKMLMRYLAYLGG--------RSGVEGRTVEQQVLESNPVLEAFGNAKTV 207
GESGAGKTE TK ++ YLA + S + ++E Q++++NPVLEA+GNAKT
Sbjct: 128 GESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTT 187
Query: 208 RNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCA-APPE 266
RNNNSSRFGKF+ + F G+I+GA + TYLLE+SRV ERNYH FY +C+ A PE
Sbjct: 188 RNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPE 247
Query: 267 VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAI 326
+ + + + C +D +DD EE+ A DI+G ++EE+ ++F+ A+I
Sbjct: 248 LNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASI 307
Query: 327 LHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITR 386
LH+G ++F + + + A L +A L AL+ + E++T+
Sbjct: 308 LHMGEMKFKQRPREEQAESDGTA---EAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTK 364
Query: 387 TLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSF 446
+ V S ALAK++Y R+F+WLV ++N ++ IGVLDI GFE F NSF
Sbjct: 365 GQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSF 424
Query: 447 EQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIAL 506
EQ CIN+TNE+LQQ FN H+F +EQEEY KE I W +I+F + + + +KP GI+++
Sbjct: 425 EQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSI 484
Query: 507 LDEACMFPKSTHETFAQKLYQTFKSNKRFI-------KPKLSRTSFTISHYAGEVTYLAD 559
L+E CMFPK+ ++F KLYQ R +P F + HYAG V Y
Sbjct: 485 LEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSIT 544
Query: 560 LFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEES-------SKSSKFSSIGSRFKLQ 612
+L+KNKD + LL ASK P V+ LF E + KSS F +I + +
Sbjct: 545 GWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRES 604
Query: 613 LQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRT 672
L LM+ L ST PH++RC+ PN +P + + ++ QL+C GVLE IRI G+P+R
Sbjct: 605 LNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLI 664
Query: 673 FYEFLHRFGVLAPDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDA 729
+ EF R+ +LAP+ + G D K EKIL + + Y++G TKVF +AG + L+
Sbjct: 665 YSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEE 724
Query: 730 RRAEVLGNAARIIQRQIRTYIARKEFIALRK---AAIVLQSYWRGILACKLYEQLR 782
R E L + Q IR Y+ RK + L+ V+Q R L + ++ +
Sbjct: 725 MRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWK 780
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]} Length = 185 | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 58 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1527 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 98.2 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 98.18 | |
| d1w7ja1 | 58 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.64 | |
| d1br2a1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 96.53 | |
| d2mysa1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 96.5 | |
| d1kk8a1 | 48 | Myosin S1 fragment, N-terminal domain {Bay scallop | 96.09 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 92.2 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 91.81 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 89.56 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 89.49 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 89.48 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 86.02 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 85.55 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 84.83 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 84.63 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 84.32 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 81.68 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1691.26 Aligned_cols=723 Identities=38% Similarity=0.664 Sum_probs=660.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 65579999999995765468899938899999996402852223487069857898898998889999821167688981
Q 000423 51 KVFPKDTEAPPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSP 130 (1527)
Q Consensus 51 ~~~~~~~~~~~~~~~Dl~~L~~l~E~~vL~~L~~Ry~~~~iYT~~G~iLiaiNP~~~lp~lY~~~~~~~y~~~~~~~l~P 130 (1527)
..+++||+ ..+++|||+.|+|||||+|||||+.||..++||||+|++|||||||+++| +|++++++.|+++..+++||
T Consensus 27 ~~~~~np~-~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~-ly~~~~~~~y~~~~~~~~pP 104 (794)
T d2mysa2 27 KPFDMNPP-KYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPP 104 (794)
T ss_dssp SCCCCCCT-TSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCG-GGCTTHHHHTTTCCTTSSCS
T ss_pred CCCCCCCC-CCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCC
T ss_conf 88789986-33476310078879889999999999768996245788899978998899-99999999970898899998
Q ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC--------CCCCCHHHHHHHCCHHHHHCC
Q ss_conf 388899999998884399828985377788703558999999988228888--------877538889872022775206
Q 000423 131 HVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG--------VEGRTVEQQVLESNPVLEAFG 202 (1527)
Q Consensus 131 HifaiA~~Ay~~m~~~~~~QsIiisGESGaGKTes~k~il~yla~~~~~~~--------~~~~~ie~~il~snpilEAFG 202 (1527)
||||||+.||+.|...++||||||||||||||||++|++|+||+.+++++. .....++++|+++||||||||
T Consensus 105 HifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFG 184 (794)
T d2mysa2 105 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFG 184 (794)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 08999999999998749980799971798878999999999999870778775311135556749999997626999854
Q ss_pred CCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEHHCCC-CCHHHHHHCCCC-CCCCCC
Q ss_conf 875567799897630799996389974450487442047422223899862023310124-994678623999-988873
Q 000423 203 NAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLG-DPKSFH 280 (1527)
Q Consensus 203 NAkT~rN~NSSRfGk~~~i~f~~~g~i~Ga~i~tyLLEksRvv~q~~~ErnfHIFYql~~-~~~~~~~~l~L~-~~~~f~ 280 (1527)
||||++|+||||||||++|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.+.|. ++.+|+
T Consensus 185 NAkT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~ 264 (794)
T d2mysa2 185 NAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYH 264 (794)
T ss_dssp EECCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCG
T ss_pred CCCCCCCCCHHHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHH
T ss_conf 87556668720111013667779997866899998537853773476544199999998399999999862689877723
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 23599954458989299999998102134678899999999999998413805872577885320461025899998986
Q 000423 281 YLNQSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360 (1527)
Q Consensus 281 yl~~~~~~~~~~~dd~~~f~~~~~al~~lg~~~~~~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~~~~~l~~aa~L 360 (1527)
||++|. ..++++||+++|..++.||.+|||+++++..||+|||||||||||+|....+.+.+.+.+. ..++.+|+|
T Consensus 265 yl~~~~-~~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~---~~~~~~a~L 340 (794)
T d2mysa2 265 YVSEGE-ITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGT---EVADKAAYL 340 (794)
T ss_dssp GGCSSC-CCCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCS---SHHHHHHHH
T ss_pred HCCCCC-CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCH---HHHHHHHHH
T ss_conf 317998-0469977699999999999980999999999999888875101116752477421223663---799999988
Q ss_pred CCCCHHHHHHHHHHCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 18999989998711335307854861499566765367899999999977888750012466899872899712454455
Q 000423 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFES 440 (1527)
Q Consensus 361 Lgv~~~~L~~~l~~~~~~~~~e~i~~~l~~~~a~~~rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~ 440 (1527)
|||+.++|.++|+++.+.++++.+++++++++|.++||+|||+||++||+|||.+||.++.+......+||||||||||+
T Consensus 341 Lgi~~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~ 420 (794)
T d2mysa2 341 MGLNSAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEI 420 (794)
T ss_dssp HTCCHHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCC
T ss_pred HCCCHHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
T ss_conf 19798895304105689833665046388999988999899999999999999876632066777651789853255554
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCCHHH
Q ss_conf 77882335565320257754455645555597752128752014435738788986218774200210000699994598
Q 000423 441 FKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHET 520 (1527)
Q Consensus 441 f~~NsfEQlcINyaNEkLq~~f~~~vf~~eqeey~~EgI~w~~i~~~dn~~~idlie~~~~Gil~lLdee~~~p~~td~~ 520 (1527)
|+.||||||||||||||||++||+++|+.||++|.+|||+|..|+|.||.+++++++.+|.|||++|||||++|+|||++
T Consensus 421 f~~NsfEQLcINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~~ 500 (794)
T d2mysa2 421 FDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTS 500 (794)
T ss_dssp CSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
T ss_conf 45663889999999999999999999998999997548776567777987999999848532799998861476651889
Q ss_pred HHHHHHHHH-CCCCCCCCCCCC----CCCEEEEECCCEEEEECHHHHHHCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCC
Q ss_conf 999999781-299986678889----996289803640364001053411330249999999507703453019999666
Q 000423 521 FAQKLYQTF-KSNKRFIKPKLS----RTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGLFPPLPEE 595 (1527)
Q Consensus 521 ~~~kl~~~~-~~~~~~~~p~~~----~~~F~I~Hyag~V~Y~~~gfleKN~D~~~~~~~~ll~~S~~~~i~~lf~~~~~~ 595 (1527)
|++|++.+| ++++.|.+|... ...|+|+||||+|+|+++||++||+|.++++++++++.|++++|+.||+.....
T Consensus 501 f~~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~ 580 (794)
T d2mysa2 501 FKNKLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGE 580 (794)
T ss_dssp HHHHHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC---
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf 99999987357885636887567878871689830763604412657755584437999999867988999866402443
Q ss_pred CC----------CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 66----------88888650599999999999997147990665048888889776763679988511135689998741
Q 000423 596 SS----------KSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCA 665 (1527)
Q Consensus 596 ~~----------~~~~~~tv~~~f~~~L~~Lm~~l~~t~~hfIrCIkPN~~k~~~~fd~~~V~~QLr~~gvle~iri~~~ 665 (1527)
+. +.+++.||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||||+||||+|||++.
T Consensus 581 ~~~~~~~~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~ 660 (794)
T d2mysa2 581 AEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRK 660 (794)
T ss_dssp -----------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
T ss_conf 33566776877778752408999999999999987568986888646886558764356999999986278999999966
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCC--CCCCHHHHHHHHHHHCCCC--CCEECCEEEEECCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 698556657888622112546558--9984499999998560999--710022188605306999999999874457999
Q 000423 666 GYPTRRTFYEFLHRFGVLAPDVLD--GNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARI 741 (1527)
Q Consensus 666 Gyp~r~~~~~F~~ry~~l~~~~~~--~~~~~~~~~~~il~~~~~~--~~~iG~TkVFlr~g~~~~LE~~r~~~l~~aa~~ 741 (1527)
|||+|++|.+|+.||++|+|.... ...|.++.|+.||..++++ .|++|+||||||++++..||++|.+.+.++++.
T Consensus 661 Gyp~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~ 740 (794)
T d2mysa2 661 GFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITA 740 (794)
T ss_dssp SCCCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 89863649999999998583424455668999999999996697813587179759867439999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999998999999999---999999999999999999999
Q 000423 742 IQRQIRTYIARKEFIAL---RKAAIVLQSYWRGILACKLYE 779 (1527)
Q Consensus 742 IQk~~R~~l~Rk~y~~~---r~aai~IQ~~~Rg~laRk~~~ 779 (1527)
||++||||++|++|+++ |.|++.||++||||++||.|.
T Consensus 741 IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~ 781 (794)
T d2mysa2 741 TQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWP 781 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 99999999999999999999999999999999999982369
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|