Citrus Sinensis ID: 000426
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1525 | 2.2.26 [Sep-21-2011] | |||||||
| P54697 | 2245 | Myosin-J heavy chain OS=D | yes | no | 0.675 | 0.458 | 0.389 | 0.0 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | yes | no | 0.666 | 0.550 | 0.376 | 0.0 | |
| P21271 | 1818 | Unconventional myosin-Vb | yes | no | 0.662 | 0.556 | 0.379 | 0.0 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | yes | no | 0.660 | 0.550 | 0.389 | 0.0 | |
| Q99104 | 1853 | Unconventional myosin-Va | no | no | 0.660 | 0.543 | 0.387 | 0.0 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | no | no | 0.661 | 0.543 | 0.387 | 0.0 | |
| P70569 | 1846 | Unconventional myosin-Vb | no | no | 0.665 | 0.549 | 0.372 | 0.0 | |
| Q02440 | 1829 | Unconventional myosin-Va | yes | no | 0.695 | 0.580 | 0.373 | 0.0 | |
| Q875X3 | 1567 | Myosin-2A OS=Naumovozyma | yes | no | 0.660 | 0.642 | 0.370 | 0.0 | |
| Q876G9 | 1568 | Myosin-2 OS=Saccharomyces | N/A | no | 0.748 | 0.728 | 0.344 | 0.0 |
| >sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 | Back alignment and function desciption |
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Score = 729 bits (1882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/1143 (38%), Positives = 651/1143 (56%), Gaps = 113/1143 (9%)
Query: 3 GTPVNIIVGSHVWVEDPEEAWIDGQVLK---ITGKDVEVQTTKGKKVVANLSKIYPKDME 59
TP G+ VW+ D E WI V++ + V V+T ++V LSK++ K+
Sbjct: 19 STPKLYQEGAGVWIPDQELGWIGADVIEHSETSADQVLVRTEDDREVKIPLSKVFQKN-P 77
Query: 60 EPAGGVDDMTKLSYLHEPGVLRNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQ 119
+ GVDD++ LS+LHEP +L NL RY LN+IYTY G ILIAINP+ LP +Y M+
Sbjct: 78 DILEGVDDLSFLSHLHEPAILHNLHHRYNLNQIYTYIGKILIAINPYTSLP-LYGKEMIS 136
Query: 120 QYKGAPFGELSPHVFAVADVAYRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAFLGG 179
Y G G L+PHV+AVA+ A++ M +G S SILVSGESGAGKTETTK L++Y A +G
Sbjct: 137 AYYGKQLGTLAPHVYAVAEDAFKDMRYDGTSQSILVSGESGAGKTETTKFLLQYFAAMGN 196
Query: 180 --------------RTATEG----------------RTVEQQVLESNPVLEAFGNAKTVR 209
T+++G ++VE++VLES P+LEAFGNAKT+R
Sbjct: 197 MIKESTSSSSINGINTSSDGIPVTPPPSPMKKSPVDKSVEERVLESTPLLEAFGNAKTLR 256
Query: 210 NNNSSRFGKFVEIQFDKQGRISGAAIRTYLLERSRVCQISSPERNYHCFY-LLCNAPQEE 268
N+NSSRFGKF+EI F++ G I GA I TYLLE+SR+ + ERNYH FY LL A +E
Sbjct: 257 NDNSSRFGKFIEIHFNEMGSIIGAKILTYLLEKSRIVRQVYNERNYHIFYQLLSGASEEL 316
Query: 269 VERYKLGNPKTFHYLNQSTCFELVGVSDAHDYLATRRAMDIVGISEKDQEAIFRVVAAIL 328
E+ L + + YLN+S CFE+ GVSD + T AM + GI+ +QE +FR+++AIL
Sbjct: 317 KEKLNLKTIEEYSYLNKSGCFEIEGVSDEEHFNKTCHAMQVAGITLVEQENVFRILSAIL 376
Query: 329 HIGNIEFSK--GKEVDSS--IPKDDQAKFHLKTAAELLMC-DPVALEDALCKRIMITPEE 383
IGN EF G DS I +D L+ + LL C P L +++ R ++T +E
Sbjct: 377 LIGNFEFENIAGSNDDSCQLIDRDP-----LEKVSVLLGCAQPDELLNSMLTRKVVTGKE 431
Query: 384 VIKRSLDPQSALVSRDGLAKTIYSRLFDWLVDKINSS--IGQDPNSKSLIGVLDIYGFES 441
+ A +RD L+ +Y +FDWLV KINSS I SKS IGVLDIYGFES
Sbjct: 432 SYISHNTKERAENARDSLSMFLYGMMFDWLVVKINSSMSISTQQKSKSFIGVLDIYGFES 491
Query: 442 FKSNSKTPLICFIISCC---------AHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIE 492
F+ N F I+ HVFK EQ+EY KE+IDWSYI+F DNQD LDLIE
Sbjct: 492 FEVNG---FEQFCINYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYIDFNDNQDTLDLIE 548
Query: 493 KKPGGIIALLDEACMFPKSTHETFANKLYQTFKSHKRFVKPKFSRTDFAIAHYAGEVMYQ 552
KKP I+ LLDE MFPK+T +T A KLY SH +F KP+FS T F I HYAG+V Y+
Sbjct: 549 KKPICILTLLDEETMFPKATPQTLATKLYSKMTSHSKFEKPRFSSTAFTINHYAGKVTYE 608
Query: 553 SDQFLDKNKDYVVPEHQDLLSASNCPFVAGLFP------------------PLPEET--- 591
+DQFLDKNKD+++PE +L SN F+ L P T
Sbjct: 609 TDQFLDKNKDFIIPEQISILQRSNFSFIKVLMSHSDKFTQSPGGHPQGNGGPTSSNTKGT 668
Query: 592 --SKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNLLKPAVFENANIMQQLRCG 649
S S KF S+GS+F L LM T+++T PHY+RC+KPN P F +++ QLRCG
Sbjct: 669 SGSSSMKFLSVGSQFSTSLATLMKTISTTTPHYVRCIKPNPEKLPQTFNKQDVIHQLRCG 728
Query: 650 GVLEAIRISCAGYPTRRPFFEFLNRFGLLAPEFLEG--------NYDEKVACKKILEKKG 701
GV+E++RI CAG+PTRR EF R+ +L + + + + K+ KIL +
Sbjct: 729 GVMESVRICCAGFPTRRLLSEFYQRYKILYVKDINTGSGGGKKGSNNNKIKDPKILVQNL 788
Query: 702 LQG-------FQIGKTKIFLRAGQMAELDARRAEILSSAAKTIQRRIRTHIARRRFIALR 754
L G ++IG TK+FLRAGQ+A L+ R E L +A IQ+R + ++ R+R+ LR
Sbjct: 789 LTGIELSDDKYKIGLTKVFLRAGQLASLEDMRLEQLDRSATVIQKRWKGYLYRKRYKQLR 848
Query: 755 EATIVLQSLCRGRLACRVFDSMKKEAAAVKIQKHIRRYDARTAYKRLHVSTLVLQTGLRT 814
+A++++Q+ R A + ++++ +A+ IQK R + R Y+++ ++L LQT +R
Sbjct: 849 DASLIIQTKLRSVHAKQQLSALQRTHSAILIQKVWRAHRDRVQYQKIRDASLQLQTVMRR 908
Query: 815 MAARKEFRFRKQTKAAIIIQARWRCHKATAYYKRLKRGSIKAQTRWRGRIARRELRKLKM 874
++ + AAII+Q + R + + RG I Q RWR ++A+R +L+
Sbjct: 909 HLFSEQVHRERCENAAIILQTKIRQILSKREVDKKLRGIILIQARWRMKLAKRVYIQLRA 968
Query: 875 AARETGALKEAKDKLQKTVEDLTWRIQLEKRLRTDLEEAKAQEVT----------KLQNS 924
AR ++E K+KLQ+ +E+L WR+ E + + LE+ K + T L+
Sbjct: 969 EARSLRTVQEQKNKLQEKLEELQWRLTSEAKRKQQLEDQKVKSDTTISELSSNNDHLELQ 1028
Query: 925 LQEMQAKLDEANASLVKEREAAKKAIEEAPPVVKEKEVLVEDTKKI-ESLTAEVEGLKTA 983
L E+Q K E L K ++++ + E ++E+ ++ + K+ + L ++ +
Sbjct: 1029 LSEIQLKYQE----LDKSNQSSQLQLSECLSKLEEQTQQLDHSSKLNKKLEKDLSDQHDS 1084
Query: 984 LESEKKRADETERKSKEAQETSEEKQKKLDETEKKVIQLQESLTRLEEKLANLESENQVL 1043
+E + + +ETE++ ++ ++ SEE KL +T +++ ++ RL ++ + NQ+
Sbjct: 1085 IEKLQSQFNETEQQLQQFKQQSEELSSKLSKTTQQLDFNKQEFDRLSQERDTDNTNNQLE 1144
Query: 1044 RQQ 1046
QQ
Sbjct: 1145 IQQ 1147
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Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
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| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
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| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
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| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function description |
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| >sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 | Back alignment and function description |
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| >sp|Q875X3|MYO2A_NAUCC Myosin-2A OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=MYO2A PE=3 SV=2 | Back alignment and function description |
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| >sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1525 | ||||||
| 255561889 | 1533 | myosin XI, putative [Ricinus communis] g | 0.996 | 0.991 | 0.878 | 0.0 | |
| 359488002 | 1567 | PREDICTED: myosin-H heavy chain-like [Vi | 0.998 | 0.971 | 0.872 | 0.0 | |
| 147787627 | 1594 | hypothetical protein VITISV_019007 [Viti | 0.991 | 0.948 | 0.873 | 0.0 | |
| 449442963 | 1530 | PREDICTED: unconventional myosin-Vc-like | 0.997 | 0.994 | 0.859 | 0.0 | |
| 449483036 | 1530 | PREDICTED: LOW QUALITY PROTEIN: unconven | 0.997 | 0.994 | 0.859 | 0.0 | |
| 356574886 | 1537 | PREDICTED: myosin-Vc-like [Glycine max] | 0.997 | 0.989 | 0.850 | 0.0 | |
| 15221848 | 1529 | Myosin family protein with Dil domain [A | 0.994 | 0.991 | 0.841 | 0.0 | |
| 356533645 | 1556 | PREDICTED: myosin-Vc-like [Glycine max] | 0.996 | 0.976 | 0.840 | 0.0 | |
| 297843660 | 2575 | predicted protein [Arabidopsis lyrata su | 0.998 | 0.591 | 0.823 | 0.0 | |
| 356504115 | 1529 | PREDICTED: myosin-J heavy chain-like [Gl | 0.995 | 0.992 | 0.819 | 0.0 |
| >gi|255561889|ref|XP_002521953.1| myosin XI, putative [Ricinus communis] gi|223538757|gb|EEF40357.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 2820 bits (7311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1348/1534 (87%), Positives = 1442/1534 (94%), Gaps = 14/1534 (0%)
Query: 2 QGTPVNIIVGSHVWVEDPEEAWIDGQVLKITGKDVEVQTTKGKKVVANLSKIYPKDMEEP 61
+GT VNII GSHVWVEDPE AW+DGQVLKITGK+VE++T+KGKKV LSKIYPKDME P
Sbjct: 4 KGTTVNIIEGSHVWVEDPELAWLDGQVLKITGKNVEIETSKGKKVTTPLSKIYPKDMEAP 63
Query: 62 AGGVDDMTKLSYLHEPGVLRNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQY 121
AGGVDDMTKLSYLHEPGVL NLK+RYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQY
Sbjct: 64 AGGVDDMTKLSYLHEPGVLENLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQY 123
Query: 122 KGAPFGELSPHVFAVADVAYRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRT 181
KGAPFGELSPHVFAVADVAYRAM+NEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGR
Sbjct: 124 KGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRA 183
Query: 182 ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLE 241
ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLE
Sbjct: 184 ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLE 243
Query: 242 RSRVCQISSPERNYHCFYLLCNAPQEEVERYKLGNPKTFHYLNQSTCFELVGVSDAHDYL 301
RSRVCQIS PERNYHCFYLLC APQEEVE+YKLGNPK+FHYLNQS C+ELVGVSDAHDYL
Sbjct: 244 RSRVCQISDPERNYHCFYLLCAAPQEEVEKYKLGNPKSFHYLNQSNCYELVGVSDAHDYL 303
Query: 302 ATRRAMDIVGISEKDQEAIFRVVAAILHIGNIEFSKGKEVDSSIPKDDQAKFHLKTAAEL 361
ATRRAMDIVGIS K+QEAIFRVVA+ILH+GNIEF+KGKEVDSS+PK+DQAKFHLK AEL
Sbjct: 304 ATRRAMDIVGISAKEQEAIFRVVASILHLGNIEFTKGKEVDSSVPKNDQAKFHLKMTAEL 363
Query: 362 LMCDPVALEDALCKRIMITPEEVIKRSLDPQSALVSRDGLAKTIYSRLFDWLVDKINSSI 421
LMCDPVALEDALCKR+MITPEEVIKRSLDPQSA VSRDGLAKT+YSRLFDWLVDKIN+SI
Sbjct: 364 LMCDPVALEDALCKRVMITPEEVIKRSLDPQSATVSRDGLAKTVYSRLFDWLVDKINNSI 423
Query: 422 GQDPNSKSLIGVLDIYGFESFKSNSKTPLICFIISCC---------AHVFKMEQEEYTKE 472
GQD NSK LIGVLDIYGFESFK+NS F I+ HVFKMEQEEYTKE
Sbjct: 424 GQDHNSKCLIGVLDIYGFESFKTNS---FEQFCINFTNEKLQQHFNQHVFKMEQEEYTKE 480
Query: 473 EIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKSHKRFVK 532
+IDWSYIEFVDNQDVLDLIEKKPGGI+ALLDEACMFPKSTHETFANKLYQTFK+HKRF+K
Sbjct: 481 QIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKNHKRFIK 540
Query: 533 PKFSRTDFAIAHYAGEVMYQSDQFLDKNKDYVVPEHQDLLSASNCPFVAGLFPPLPEETS 592
PK SRTDF I HYAGEV+YQSDQFLDKNKDYVVPEHQDLLS S CPFVAGLFPPLPEETS
Sbjct: 541 PKLSRTDFTIGHYAGEVLYQSDQFLDKNKDYVVPEHQDLLSVSKCPFVAGLFPPLPEETS 600
Query: 593 KSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNLLKPAVFENANIMQQLRCGGVL 652
KSSKFSSIGSRFKLQLQQLM+TLNSTEPHYIRCVKPNNLLKPA+FEN NIMQQLRCGGVL
Sbjct: 601 KSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVL 660
Query: 653 EAIRISCAGYPTRRPFFEFLNRFGLLAPEFLEGNYDEKVACKKILEKKGLQGFQIGKTKI 712
EAIRISCAGYPTR+PFFEF+NRFGLLA E LEGNYDEKVAC+KILEKKGLQGFQ+GKTK+
Sbjct: 661 EAIRISCAGYPTRKPFFEFINRFGLLATEVLEGNYDEKVACRKILEKKGLQGFQVGKTKV 720
Query: 713 FLRAGQMAELDARRAEILSSAAKTIQRRIRTHIARRRFIALREATIVLQSLCRGRLACRV 772
FLRAGQMAELDARRAE+LS+AAKTIQRR+RTH AR+RFIALR+ATI +Q+L RGRLAC++
Sbjct: 721 FLRAGQMAELDARRAEVLSNAAKTIQRRVRTHCARKRFIALRKATIFVQALWRGRLACKI 780
Query: 773 FDSMKKEAAAVKIQKHIRRYDARTAYKRLHVSTLVLQTGLRTMAARKEFRFRKQTKAAII 832
F++M++EAAAVKIQKH+R+Y+AR AYK+LHVS L+LQTGLR MAARKEFRFR+QTKAAII
Sbjct: 781 FENMRREAAAVKIQKHVRKYEARKAYKKLHVSALLLQTGLRAMAARKEFRFRRQTKAAII 840
Query: 833 IQARWRCHKATAYYKRLKRGSIKAQTRWRGRIARRELRKLKMAARETGALKEAKDKLQKT 892
IQARWRCHKA +YYKRL RG I +QTRWRGR+ARRELRKLKM ARETGALKEAK+KL+K
Sbjct: 841 IQARWRCHKAVSYYKRLHRGVIVSQTRWRGRVARRELRKLKMEARETGALKEAKNKLEKQ 900
Query: 893 VEDLTWRIQLEKRLRTDLEEAKAQEVTKLQNSLQEMQAKLDEANASLVKEREAAKKAIEE 952
VE+LTWR+QLEKRLRTDLEEAKAQE TK QNSL+EMQ K++E+NA LVKEREAAKKAIEE
Sbjct: 901 VEELTWRLQLEKRLRTDLEEAKAQEATKFQNSLEEMQKKIEESNAMLVKEREAAKKAIEE 960
Query: 953 APPVVKEKEVLVEDTKKIESLTAEVEGLKTALESEKKRADETERKSKEAQETSEEKQKKL 1012
APPV+KE +VLVEDTKKIESLT EVE LK +L+SEK+RA E E+K EAQ + EEKQKKL
Sbjct: 961 APPVIKETQVLVEDTKKIESLTEEVEKLKVSLDSEKQRAYENEKKYNEAQGSCEEKQKKL 1020
Query: 1013 DETEKKVIQLQESLTRLEEKLANLESENQVLRQQAVSIAPNKFLSGRSRSIIQR-GADSG 1071
++ EKKV QLQESL RLEEKL+NLESENQV RQQAVS+APNKFLSGRSRSI+Q
Sbjct: 1021 EDAEKKVQQLQESLQRLEEKLSNLESENQVFRQQAVSMAPNKFLSGRSRSIMQVFSLAES 1080
Query: 1072 HIPGDAKSTLDLHSSSINHRDPLEIEEKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPI 1131
HIP +AK++LDLHS+S+NHRD E+++KPQKSLNEKQQE+QELLIRCIAQHLGF+GNRP
Sbjct: 1081 HIPVEAKASLDLHSASLNHRDMSEVDDKPQKSLNEKQQEHQELLIRCIAQHLGFSGNRPT 1140
Query: 1132 AACIIYKCLLQWRSFEVERTSVFDRIIQTIGNAIETQDNNDILAYWLSNASTLLLLLQRT 1191
AACIIYKCLLQWRSFEVERTSVFDRIIQTIG++IE QDNND+LAYWLSNASTLLLLLQRT
Sbjct: 1141 AACIIYKCLLQWRSFEVERTSVFDRIIQTIGHSIENQDNNDVLAYWLSNASTLLLLLQRT 1200
Query: 1192 LKASGAAGMAPQRRRSSSATLFGRMTQSFRGTPQGVNLSLINGGVNGGVDTLRQVEAKYP 1251
LKASGAAGMAPQRRRSSSATLFGRMTQSFRG PQGVNLSLING +NGGVDTLRQVEAKYP
Sbjct: 1201 LKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVNLSLINGSINGGVDTLRQVEAKYP 1260
Query: 1252 ALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANSAAQQ 1311
ALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKG RSVANSAAQQ
Sbjct: 1261 ALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKG-VRSVANSAAQQ 1319
Query: 1312 ALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSN 1371
ALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSN
Sbjct: 1320 ALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSN 1379
Query: 1372 GEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPV 1431
GEYVKAGLAELEHWCY ATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPV
Sbjct: 1380 GEYVKAGLAELEHWCYNATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPV 1439
Query: 1432 LSIQQLYRISTMYWDDKYGTHSVSSDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVD 1491
LSIQQLYRISTMYWDDKYGTHSVSS+VISNMRVLMTEDSNNAVS+SFLLDDDSSIPFSVD
Sbjct: 1440 LSIQQLYRISTMYWDDKYGTHSVSSEVISNMRVLMTEDSNNAVSSSFLLDDDSSIPFSVD 1499
Query: 1492 DLSKSMQQIDISDIEPPPLIRENSGFSFLLPRSD 1525
DLSKSM+QIDI+DIEPPPLIRENSGFSFLLPRSD
Sbjct: 1500 DLSKSMEQIDIADIEPPPLIRENSGFSFLLPRSD 1533
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359488002|ref|XP_002263591.2| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147787627|emb|CAN71597.1| hypothetical protein VITISV_019007 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449442963|ref|XP_004139250.1| PREDICTED: unconventional myosin-Vc-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449483036|ref|XP_004156476.1| PREDICTED: LOW QUALITY PROTEIN: unconventional myosin-Vc-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356574886|ref|XP_003555574.1| PREDICTED: myosin-Vc-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|15221848|ref|NP_175858.1| Myosin family protein with Dil domain [Arabidopsis thaliana] gi|332194997|gb|AEE33118.1| Myosin family protein with Dil domain [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356533645|ref|XP_003535372.1| PREDICTED: myosin-Vc-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297843660|ref|XP_002889711.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297335553|gb|EFH65970.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356504115|ref|XP_003520844.1| PREDICTED: myosin-J heavy chain-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1525 | ||||||
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.996 | 0.993 | 0.805 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.994 | 0.985 | 0.803 | 0.0 | |
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.992 | 0.979 | 0.698 | 0.0 | |
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.988 | 0.991 | 0.645 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.983 | 0.989 | 0.574 | 0.0 | |
| TAIR|locus:2125929 | 1522 | XI-I [Arabidopsis thaliana (ta | 0.970 | 0.972 | 0.531 | 0.0 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.838 | 0.852 | 0.577 | 0.0 | |
| TAIR|locus:2045198 | 1556 | XIF "myosin-like protein XIF" | 0.748 | 0.733 | 0.583 | 0.0 | |
| TAIR|locus:2039007 | 1493 | XIG "myosin-like protein XIG" | 0.781 | 0.798 | 0.561 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.674 | 0.594 | 0.591 | 0.0 |
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 6370 (2247.4 bits), Expect = 0., P = 0.
Identities = 1232/1529 (80%), Positives = 1345/1529 (87%)
Query: 3 GTPVNIIVGSHVWVEDPEEAWIDGQVLKITGKDVEVQTTKGKKVVANLSKIYPKDMEEPA 62
GTPVNIIVGSHVW+ED + AWIDG V KI G+DVEVQ T GKK+ A LSKIYPKDME PA
Sbjct: 5 GTPVNIIVGSHVWIEDSDVAWIDGLVEKINGQDVEVQATNGKKITAKLSKIYPKDMEAPA 64
Query: 63 GGVDDMTKLSYLHEPGVLRNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYK 122
GGVDDMTKLSYLHEPGVL+NLK RYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYK
Sbjct: 65 GGVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYK 124
Query: 123 GAPFGELSPHVFAVADVAYRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRTA 182
GAPFGELSPHVFAVADVAYRAM+NEGKSNSILVSGESGAGKTETTKMLMRYLA+LGGR
Sbjct: 125 GAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAV 184
Query: 183 TEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLER 242
TEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAA+RTYLLER
Sbjct: 185 TEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAVRTYLLER 244
Query: 243 SRVCQISSPERNYHCFYLLCNAPQEEVERYKLGNPKTFHYLNQSTCFELVGVSDAHDYLA 302
SRVCQIS PERNYHCFYLLC APQEE+E+YKLG+PKTFHYLNQS CFELVG+SDAHDY+A
Sbjct: 245 SRVCQISDPERNYHCFYLLCAAPQEELEKYKLGHPKTFHYLNQSKCFELVGISDAHDYIA 304
Query: 303 TRRAMDIVGISEKDQEAIFRVVAAILHIGNIEFSKGKEVDSSIPKDDQAKFHLKTAAELL 362
TRRAMDIVG+SEK+QEAIFRVVAAILH+GN+EF+KGKEVDSS+PKDD++KFHL T AELL
Sbjct: 305 TRRAMDIVGMSEKEQEAIFRVVAAILHLGNVEFTKGKEVDSSVPKDDKSKFHLNTVAELL 364
Query: 363 MCDPVALEDALCKRIMITPEEVIKRSLDPQSALVSRDGLAKTIYSRLFDWLVDKINSSIG 422
MCD ALEDALCKR+M+TPEEVIKRSLDPQSAL+SRDGLAKTIYSRLFDWLV+KIN SIG
Sbjct: 365 MCDVKALEDALCKRVMVTPEEVIKRSLDPQSALISRDGLAKTIYSRLFDWLVEKINVSIG 424
Query: 423 QDPNSKSLIGVLDIYGFESFKSNSKTPL-ICFIISCCA-----HVFKMEQEEYTKEEIDW 476
QD S+SLIGVLDIYGFESFK+NS I F HVFKMEQEEYTKE IDW
Sbjct: 425 QDATSRSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDW 484
Query: 477 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKSHKRFVKPKFS 536
SYIEFVDNQDVLDLIEKKPGGI+ALLDEACMFPKSTHETFANKLYQTFK+HKRF+KPK S
Sbjct: 485 SYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPKLS 544
Query: 537 RTDFAIAHYAGEVMYQSDQFLDKNKDYVVPEHQDLLSASNCPFVAGLFPPLPEETXXXXX 596
RTDFA+AHYAGEV YQSD FLDKNKDYV+PEHQDLL AS CPFV GLFPPLPEET
Sbjct: 545 RTDFAVAHYAGEVQYQSDLFLDKNKDYVIPEHQDLLGASKCPFVVGLFPPLPEETSKSSK 604
Query: 597 XXXXXXXXXLQLQQLMDTLNSTEPHYIRCVKPNNLLKPAVFENANIMQQLRCGGVLEAIR 656
LQLQQLM+TLNSTEPHYIRCVKPNNLLKPAVFEN NIMQQLRCGGVLEAIR
Sbjct: 605 FSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAVFENVNIMQQLRCGGVLEAIR 664
Query: 657 ISCAGYPTRRPFFEFLNRFGLLAPEFLEGNYDEKVACKKILEKKGLQGFQIGKTKIFLRA 716
ISCAGYPTR+PFFEF+NRFGLL P LEGNY+EK A +KIL+ GL+G+Q+GKTK+FLRA
Sbjct: 665 ISCAGYPTRKPFFEFINRFGLLYPRALEGNYEEKAAAQKILDNIGLKGYQVGKTKVFLRA 724
Query: 717 GQMAELDARRAEILSSAAKTXXXXXXXXXXXXXXXALREATIVLQSLCRGRLACRVFDSM 776
GQMAELDARR +LS+AAK LR+ATI LQ+LCRGRL+ ++FD++
Sbjct: 725 GQMAELDARRTMVLSAAAKKIQRRIRTHQAQRRFILLRKATISLQALCRGRLSSKIFDNL 784
Query: 777 KKEAAAVKIQKHIRRYDARTAYKRLHVSTLVLQTGLRTMAARKEFRFRKQTKAAIIIQAR 836
+++AAAVKIQK+ RR +R +YK LHV+ LV+QTGLR MAA K+FRFRKQTKAA IQA+
Sbjct: 785 RRQAAAVKIQKNARRLHSRKSYKNLHVAALVVQTGLRAMAAHKQFRFRKQTKAATTIQAQ 844
Query: 837 WRCHKATAYYKRLKRGSIKAQTRWRGRIARRELRKLKMAARETGALKEAKDKLQKTVEDL 896
+RCH+AT Y+K+LK+G I +QTRWRG++ARRELR+LKMA+RETGALKEAKD L+K VE+L
Sbjct: 845 FRCHRATLYFKKLKKGVILSQTRWRGKLARRELRQLKMASRETGALKEAKDMLEKKVEEL 904
Query: 897 TWRIQLEKRLRTDLEEAKAQEVTKLQNSLQEMQAKLDEANASLVXXXXXXXXXXXXXXXX 956
T+R QLEKR R DLEE K QE+ KLQ+SL+EM+ K+DE N LV
Sbjct: 905 TYRAQLEKRSRVDLEEEKNQEIKKLQSSLEEMRKKVDETNGLLVKEREAAKKAIEEAPPV 964
Query: 957 XXXXXXXXXXXXXIESLTAEVEGLKTALESEKKRADETERKSKEAQETSEEKQKKLDETE 1016
IE+LT EVEGLK LE EK+RAD+ RK EAQE+SE+++KKL++TE
Sbjct: 965 VTETQVLVEDTQKIEALTEEVEGLKANLEQEKQRADDATRKFDEAQESSEDRKKKLEDTE 1024
Query: 1017 KKVIQLQESLTRLEEKLANLESENQVLRQQAVSIAPNKFLSGRSRSIIQRGADSGHIPGD 1076
KK QLQES+TRLEEK NLESEN+VLRQQAVSIAPNKFLSGRSRSI+QRG++SGH+ D
Sbjct: 1025 KKAQQLQESVTRLEEKCNNLESENKVLRQQAVSIAPNKFLSGRSRSILQRGSESGHLSVD 1084
Query: 1077 AKSTLDLHSSSINHRDPLEIEEKPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACII 1136
A+ +LDLHS SIN RD E+++KPQKSLNEKQQENQELLIRCI QHLGF G RP+ ACII
Sbjct: 1085 ARPSLDLHSHSINRRDLSEVDDKPQKSLNEKQQENQELLIRCIVQHLGFQGKRPVTACII 1144
Query: 1137 YKCLLQWRSFEVERTSVFDRIIQTIGNAIETQDNNDILAYWLSNASTXXXXXQRTLKASG 1196
YKCLLQWRSFEVERTSVFDRIIQTIG AIETQDNN+ILAYWLSNAST QRTLKASG
Sbjct: 1145 YKCLLQWRSFEVERTSVFDRIIQTIGQAIETQDNNNILAYWLSNASTLLLLLQRTLKASG 1204
Query: 1197 AAGMAPQRRRSSSATLFGRMTQSFRGTPQGVNLSLINGGVNGGVDTLRQVEAKYPALLFK 1256
AAGMAPQRRRSSSATLFGRMTQSFRGTPQGVNL++INGGV DTLRQVEAKYPALLFK
Sbjct: 1205 AAGMAPQRRRSSSATLFGRMTQSFRGTPQGVNLAMINGGV----DTLRQVEAKYPALLFK 1260
Query: 1257 QQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANSAAQQALIAH 1316
QQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKG+SRSV N+AAQQALIAH
Sbjct: 1261 QQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGASRSVGNTAAQQALIAH 1320
Query: 1317 WQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK 1376
WQGIVKSL NFLN LK+NHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK
Sbjct: 1321 WQGIVKSLTNFLNNLKSNHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVK 1380
Query: 1377 AGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQ 1436
AGLAELEHWCY ATDEYAGS+WDELKHIRQAIGFLVIHQKPKKTLDEISH+LCPVLSIQQ
Sbjct: 1381 AGLAELEHWCYNATDEYAGSSWDELKHIRQAIGFLVIHQKPKKTLDEISHELCPVLSIQQ 1440
Query: 1437 LYRISTMYWDDKYGTHSVSSDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLSKS 1496
LYRISTMYWDDKYGTHSVS DVI+NMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLSKS
Sbjct: 1441 LYRISTMYWDDKYGTHSVSPDVIANMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDLSKS 1500
Query: 1497 MQQIDISDIEPPPLIRENSGFSFLLPRSD 1525
M++I+I D+EPPPLIRENSGFSFLLP SD
Sbjct: 1501 MERIEIGDVEPPPLIRENSGFSFLLPCSD 1529
|
|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125929 XI-I [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045198 XIF "myosin-like protein XIF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039007 XIG "myosin-like protein XIG" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1525 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 1e-180 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 1e-172 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-152 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-152 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-147 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 2e-62 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 8e-41 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-12 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 9e-12 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-11 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-11 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 8e-11 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-10 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-09 | |
| pfam02736 | 42 | pfam02736, Myosin_N, Myosin N-terminal SH3-like do | 3e-09 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 9e-09 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 9e-09 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 1e-08 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-08 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-08 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 3e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-08 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 9e-08 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-07 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 1e-07 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-07 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-07 | |
| pfam12718 | 143 | pfam12718, Tropomyosin_1, Tropomyosin like | 1e-07 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 1e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-07 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 2e-07 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 3e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 5e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 5e-07 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 6e-07 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 6e-07 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 8e-07 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 8e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-06 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 1e-06 | |
| pfam00261 | 237 | pfam00261, Tropomyosin, Tropomyosin | 1e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-06 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 2e-06 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 2e-06 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 2e-06 | |
| pfam05262 | 489 | pfam05262, Borrelia_P83, Borrelia P83/100 protein | 2e-06 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 3e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-06 | |
| COG1579 | 239 | COG1579, COG1579, Zn-ribbon protein, possibly nucl | 6e-06 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 7e-06 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 7e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-05 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 1e-05 | |
| pfam05701 | 484 | pfam05701, DUF827, Plant protein of unknown functi | 1e-05 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 1e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 2e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 2e-05 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 2e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-05 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 3e-05 | |
| pfam00769 | 244 | pfam00769, ERM, Ezrin/radixin/moesin family | 3e-05 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 3e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 4e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 4e-05 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 4e-05 | |
| pfam00261 | 237 | pfam00261, Tropomyosin, Tropomyosin | 4e-05 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 5e-05 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 5e-05 | |
| pfam05701 | 484 | pfam05701, DUF827, Plant protein of unknown functi | 6e-05 | |
| TIGR00618 | 1042 | TIGR00618, sbcc, exonuclease SbcC | 6e-05 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 7e-05 | |
| pfam09731 | 493 | pfam09731, Mitofilin, Mitochondrial inner membrane | 8e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 1e-04 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 1e-04 | |
| TIGR03319 | 514 | TIGR03319, RNase_Y, ribonuclease Y | 1e-04 | |
| TIGR01843 | 423 | TIGR01843, type_I_hlyD, type I secretion membrane | 1e-04 | |
| pfam06428 | 90 | pfam06428, Sec2p, GDP/GTP exchange factor Sec2p | 1e-04 | |
| COG2433 | 652 | COG2433, COG2433, Uncharacterized conserved protei | 1e-04 | |
| COG2433 | 652 | COG2433, COG2433, Uncharacterized conserved protei | 1e-04 | |
| PLN02939 | 977 | PLN02939, PLN02939, transferase, transferring glyc | 1e-04 | |
| pfam13166 | 713 | pfam13166, AAA_13, AAA domain | 1e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 2e-04 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 2e-04 | |
| PRK11281 | 1113 | PRK11281, PRK11281, hypothetical protein; Provisio | 2e-04 | |
| pfam08432 | 182 | pfam08432, DUF1742, Fungal protein of unknown func | 2e-04 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 2e-04 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 2e-04 | |
| COG4477 | 570 | COG4477, EzrA, Negative regulator of septation rin | 2e-04 | |
| COG3064 | 387 | COG3064, TolA, Membrane protein involved in colici | 2e-04 | |
| pfam13851 | 201 | pfam13851, GAS, Growth-arrest specific micro-tubul | 2e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 4e-04 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 4e-04 | |
| pfam07926 | 132 | pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein | 4e-04 | |
| pfam09728 | 309 | pfam09728, Taxilin, Myosin-like coiled-coil protei | 4e-04 | |
| TIGR00606 | 1311 | TIGR00606, rad50, rad50 | 4e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 5e-04 | |
| COG4372 | 499 | COG4372, COG4372, Uncharacterized protein conserve | 5e-04 | |
| pfam00769 | 244 | pfam00769, ERM, Ezrin/radixin/moesin family | 6e-04 | |
| TIGR03319 | 514 | TIGR03319, RNase_Y, ribonuclease Y | 6e-04 | |
| PRK01156 | 895 | PRK01156, PRK01156, chromosome segregation protein | 6e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 7e-04 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 7e-04 | |
| pfam03962 | 188 | pfam03962, Mnd1, Mnd1 family | 7e-04 | |
| COG3206 | 458 | COG3206, GumC, Uncharacterized protein involved in | 7e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 8e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 9e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.001 | |
| smart00787 | 312 | smart00787, Spc7, Spc7 kinetochore protein | 0.001 | |
| COG1842 | 225 | COG1842, PspA, Phage shock protein A (IM30), suppr | 0.001 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 0.001 | |
| pfam05911 | 767 | pfam05911, DUF869, Plant protein of unknown functi | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.002 | |
| PRK00409 | 782 | PRK00409, PRK00409, recombination and DNA strand e | 0.002 | |
| TIGR00606 | 1311 | TIGR00606, rad50, rad50 | 0.002 | |
| pfam06008 | 263 | pfam06008, Laminin_I, Laminin Domain I | 0.002 | |
| pfam12795 | 239 | pfam12795, MscS_porin, Mechanosensitive ion channe | 0.002 | |
| PRK04863 | 1486 | PRK04863, mukB, cell division protein MukB; Provis | 0.002 | |
| COG3883 | 265 | COG3883, COG3883, Uncharacterized protein conserve | 0.002 | |
| pfam05483 | 787 | pfam05483, SCP-1, Synaptonemal complex protein 1 ( | 0.002 | |
| PRK09510 | 387 | PRK09510, tolA, cell envelope integrity inner memb | 0.002 | |
| PLN03229 | 762 | PLN03229, PLN03229, acetyl-coenzyme A carboxylase | 0.002 | |
| pfam05483 | 787 | pfam05483, SCP-1, Synaptonemal complex protein 1 ( | 0.003 | |
| pfam13514 | 1118 | pfam13514, AAA_27, AAA domain | 0.003 | |
| pfam01442 | 191 | pfam01442, Apolipoprotein, Apolipoprotein A1/A4/E | 0.003 | |
| PRK09039 | 343 | PRK09039, PRK09039, hypothetical protein; Validate | 0.003 | |
| pfam01496 | 707 | pfam01496, V_ATPase_I, V-type ATPase 116kDa subuni | 0.003 | |
| PRK04778 | 569 | PRK04778, PRK04778, septation ring formation regul | 0.003 | |
| pfam10174 | 774 | pfam10174, Cast, RIM-binding protein of the cytoma | 0.003 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.004 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.004 | |
| pfam00769 | 244 | pfam00769, ERM, Ezrin/radixin/moesin family | 0.004 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 0.004 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1377 bits (3565), Expect = 0.0
Identities = 553/680 (81%), Positives = 607/680 (89%), Gaps = 18/680 (2%)
Query: 63 GGVDDMTKLSYLHEPGVLRNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYK 122
GVDDMTKLSYLHEPGVL+NLKTRYELNEIYTYTGNILIA+NPFQRLPH+YD HMM+QYK
Sbjct: 1 EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYK 60
Query: 123 GAPFGELSPHVFAVADVAYRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRTA 182
GA GELSPHVFA+AD AYRAM+NEGKS SILVSGESGAGKTETTKMLMRYLA++GGR
Sbjct: 61 GAALGELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAG 120
Query: 183 TEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLER 242
EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFD GRISGAAIRTYLLER
Sbjct: 121 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLER 180
Query: 243 SRVCQISSPERNYHCFYLLCNAPQEEVERYKLGNPKTFHYLNQSTCFELVGVSDAHDYLA 302
SRVCQIS PERNYHCFY LC AP E+V++YKLG+PK FHYLNQS CFEL GV DA +YLA
Sbjct: 181 SRVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLA 240
Query: 303 TRRAMDIVGISEKDQEAIFRVVAAILHIGNIEFSKGKEVDSSIPKDDQAKFHLKTAAELL 362
TRRAMD+VGISE++Q+AIFRVVAAILH+GNIEF+KG+E+DSS+ KD++++FHLKTAAELL
Sbjct: 241 TRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELL 300
Query: 363 MCDPVALEDALCKRIMITPEEVIKRSLDPQSALVSRDGLAKTIYSRLFDWLVDKINSSIG 422
MCD ALEDALCKR+M+TPEEVI + LDP SA +SRD LAKTIYSRLFDWLV+KINSSIG
Sbjct: 301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIG 360
Query: 423 QDPNSKSLIGVLDIYGFESFKSNSKTPLICFIISCC------------AHVFKMEQEEYT 470
QDP+SKSLIGVLDIYGFESFK+NS F C HVFKMEQEEYT
Sbjct: 361 QDPDSKSLIGVLDIYGFESFKTNS------FEQFCINLTNEKLQQHFNQHVFKMEQEEYT 414
Query: 471 KEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKSHKRF 530
KEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFA KLYQTFK HKRF
Sbjct: 415 KEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRF 474
Query: 531 VKPKFSRTDFAIAHYAGEVMYQSDQFLDKNKDYVVPEHQDLLSASNCPFVAGLFPPLPEE 590
KPK SRT F I HYAG+V YQ+DQFLDKNKDYVV EHQ LL+ASNC FVAGLFPPLPEE
Sbjct: 475 EKPKLSRTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEE 534
Query: 591 TSKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNLLKPAVFENANIMQQLRCGG 650
TSKSSKFSSIGSRFK QLQ LM+TL++TEPHYIRC+KPNN+LKP +FEN N++QQLRCGG
Sbjct: 535 TSKSSKFSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGG 594
Query: 651 VLEAIRISCAGYPTRRPFFEFLNRFGLLAPEFLEGNYDEKVACKKILEKKGLQGFQIGKT 710
VLEAIRISCAGYPTRR F EFL+RFG+LAPE L+G+ D+K ACKKIL+K GL+G+QIGKT
Sbjct: 595 VLEAIRISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKT 654
Query: 711 KIFLRAGQMAELDARRAEIL 730
K+FLRAGQMAELDARR E+L
Sbjct: 655 KVFLRAGQMAELDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|111612 pfam02736, Myosin_N, Myosin N-terminal SH3-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|205039 pfam12718, Tropomyosin_1, Tropomyosin like | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|189476 pfam00261, Tropomyosin, Tropomyosin | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224495 COG1579, COG1579, Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|218704 pfam05701, DUF827, Plant protein of unknown function (DUF827) | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|216108 pfam00769, ERM, Ezrin/radixin/moesin family | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|189476 pfam00261, Tropomyosin, Tropomyosin | Back alignment and domain information |
|---|
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|218704 pfam05701, DUF827, Plant protein of unknown function (DUF827) | Back alignment and domain information |
|---|
| >gnl|CDD|129705 TIGR00618, sbcc, exonuclease SbcC | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y | Back alignment and domain information |
|---|
| >gnl|CDD|130902 TIGR01843, type_I_hlyD, type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >gnl|CDD|203446 pfam06428, Sec2p, GDP/GTP exchange factor Sec2p | Back alignment and domain information |
|---|
| >gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|215507 PLN02939, PLN02939, transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >gnl|CDD|221952 pfam13166, AAA_13, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|236892 PRK11281, PRK11281, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742) | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|226883 COG4477, EzrA, Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|222417 pfam13851, GAS, Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|149160 pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|220366 pfam09728, Taxilin, Myosin-like coiled-coil protein | Back alignment and domain information |
|---|
| >gnl|CDD|129694 TIGR00606, rad50, rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|216108 pfam00769, ERM, Ezrin/radixin/moesin family | Back alignment and domain information |
|---|
| >gnl|CDD|188306 TIGR03319, RNase_Y, ribonuclease Y | Back alignment and domain information |
|---|
| >gnl|CDD|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|202833 pfam03962, Mnd1, Mnd1 family | Back alignment and domain information |
|---|
| >gnl|CDD|225747 COG3206, GumC, Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|197874 smart00787, Spc7, Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >gnl|CDD|224755 COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218806 pfam05911, DUF869, Plant protein of unknown function (DUF869) | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|129694 TIGR00606, rad50, rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|218852 pfam06008, Laminin_I, Laminin Domain I | Back alignment and domain information |
|---|
| >gnl|CDD|221776 pfam12795, MscS_porin, Mechanosensitive ion channel porin domain | Back alignment and domain information |
|---|
| >gnl|CDD|235316 PRK04863, mukB, cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226400 COG3883, COG3883, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|114219 pfam05483, SCP-1, Synaptonemal complex protein 1 (SCP-1) | Back alignment and domain information |
|---|
| >gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178768 PLN03229, PLN03229, acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|114219 pfam05483, SCP-1, Synaptonemal complex protein 1 (SCP-1) | Back alignment and domain information |
|---|
| >gnl|CDD|205692 pfam13514, AAA_27, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|144876 pfam01442, Apolipoprotein, Apolipoprotein A1/A4/E domain | Back alignment and domain information |
|---|
| >gnl|CDD|181619 PRK09039, PRK09039, hypothetical protein; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|216531 pfam01496, V_ATPase_I, V-type ATPase 116kDa subunit family | Back alignment and domain information |
|---|
| >gnl|CDD|179877 PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|220614 pfam10174, Cast, RIM-binding protein of the cytomatrix active zone | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|216108 pfam00769, ERM, Ezrin/radixin/moesin family | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1525 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.93 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 99.88 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.19 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.65 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.57 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.42 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.4 | |
| PF02736 | 42 | Myosin_N: Myosin N-terminal SH3-like domain; Inter | 98.27 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 98.14 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.13 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.67 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.64 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.37 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.35 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 97.18 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 96.94 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.94 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.93 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.91 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.82 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.79 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.78 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.73 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.72 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.62 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.62 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.61 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.57 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.54 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.41 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.34 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.22 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 96.18 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 96.15 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.15 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.14 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 95.99 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 95.98 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 95.9 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 95.85 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 95.74 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 95.7 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 95.66 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 95.59 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 95.58 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 95.55 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 95.54 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.53 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.48 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 95.47 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.43 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 95.41 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 95.36 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.32 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 95.29 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.28 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 95.2 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 95.09 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 95.0 | |
| PRK09039 | 343 | hypothetical protein; Validated | 94.88 | |
| PTZ00014 | 821 | myosin-A; Provisional | 94.84 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.78 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 94.77 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 94.75 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 94.74 | |
| PRK09039 | 343 | hypothetical protein; Validated | 94.7 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 94.67 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.63 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 94.63 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 94.62 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.61 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 94.42 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 94.41 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.38 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 94.38 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 94.36 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 94.25 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 94.04 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 94.03 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 93.98 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 93.97 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.93 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 93.89 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 93.86 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 93.85 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 93.82 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 93.81 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 93.78 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 93.74 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 93.72 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 93.63 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 93.56 | |
| PRK07196 | 434 | fliI flagellum-specific ATP synthase; Validated | 93.5 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 93.49 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 93.44 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 93.17 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 93.02 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 92.98 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 92.87 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 92.86 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 92.86 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 92.82 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 92.82 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 92.79 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 92.75 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 92.66 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 92.63 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 92.62 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 92.61 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 92.6 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 92.56 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 92.52 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.5 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 92.22 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 92.19 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 92.06 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 91.97 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 91.96 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 91.84 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 91.81 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 91.78 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 91.77 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 91.74 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 91.7 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 91.65 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 91.6 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 91.6 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 91.52 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 91.37 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 91.34 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 91.3 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 91.3 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 91.23 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 91.12 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 91.12 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 91.11 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 91.0 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 90.94 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 90.9 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 90.75 | |
| PRK08472 | 434 | fliI flagellum-specific ATP synthase; Validated | 90.75 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 90.74 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 90.73 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 90.72 | |
| PRK06696 | 223 | uridine kinase; Validated | 90.7 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 90.68 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 90.57 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 90.56 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 90.44 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 90.4 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 90.39 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 90.34 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 90.31 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 90.29 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.27 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 90.26 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 90.2 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 90.18 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 90.09 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 90.06 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 90.04 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 89.95 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 89.94 | |
| PRK08972 | 444 | fliI flagellum-specific ATP synthase; Validated | 89.91 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 89.83 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 89.81 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 89.69 | |
| PF08826 | 61 | DMPK_coil: DMPK coiled coil domain like; InterPro: | 89.65 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 89.58 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 89.5 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 89.43 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 89.43 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 89.39 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 89.39 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 89.38 | |
| PTZ00121 | 2084 | MAEBL; Provisional | 89.38 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 89.37 | |
| PF10234 | 267 | Cluap1: Clusterin-associated protein-1; InterPro: | 89.25 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 89.22 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 89.22 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 89.22 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 89.16 | |
| PF14915 | 305 | CCDC144C: CCDC144C protein coiled-coil region | 89.03 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 89.01 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 88.97 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 88.92 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 88.84 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 88.81 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 88.78 | |
| COG3074 | 79 | Uncharacterized protein conserved in bacteria [Fun | 88.76 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 88.7 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 88.69 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 88.65 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 88.55 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 88.5 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 88.41 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 88.38 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 88.37 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 88.37 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 88.18 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 88.15 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 88.14 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 88.14 | |
| PF05729 | 166 | NACHT: NACHT domain | 88.13 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 88.12 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 88.12 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 88.11 | |
| COG1382 | 119 | GimC Prefoldin, chaperonin cofactor [Posttranslati | 88.03 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 88.03 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 87.98 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 87.96 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 87.93 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 87.84 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 87.83 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 87.74 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 87.68 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 87.64 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 87.62 | |
| KOG2891 | 445 | consensus Surface glycoprotein [General function p | 87.55 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 87.51 | |
| PRK06315 | 442 | type III secretion system ATPase; Provisional | 87.49 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 87.48 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 87.48 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 87.45 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 87.4 | |
| PRK07721 | 438 | fliI flagellum-specific ATP synthase; Validated | 87.4 | |
| PRK09099 | 441 | type III secretion system ATPase; Provisional | 87.4 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 87.38 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 87.37 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 87.27 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 87.14 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 87.09 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 87.06 | |
| PRK10869 | 553 | recombination and repair protein; Provisional | 86.97 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 86.95 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 86.9 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 86.89 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 86.87 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 86.87 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 86.83 | |
| PRK12608 | 380 | transcription termination factor Rho; Provisional | 86.75 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 86.65 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 86.55 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 86.45 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 86.26 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 86.22 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 86.15 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 86.12 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 85.88 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 85.87 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 85.87 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 85.78 | |
| PF09728 | 309 | Taxilin: Myosin-like coiled-coil protein; InterPro | 85.66 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 85.58 | |
| PRK12377 | 248 | putative replication protein; Provisional | 85.51 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 85.44 | |
| PRK06217 | 183 | hypothetical protein; Validated | 85.43 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 85.42 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 85.39 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 85.39 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 85.38 | |
| COG0497 | 557 | RecN ATPase involved in DNA repair [DNA replicatio | 85.37 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 85.3 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 85.27 | |
| PRK06002 | 450 | fliI flagellum-specific ATP synthase; Validated | 85.23 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 85.23 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 85.22 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 85.22 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 85.2 | |
| PRK06936 | 439 | type III secretion system ATPase; Provisional | 85.16 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 85.14 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 85.13 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 85.08 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 85.07 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 85.05 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 84.96 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 84.63 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 84.61 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 84.61 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 84.59 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 84.58 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 84.5 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 84.47 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 84.42 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 84.38 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 84.37 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 84.35 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 84.35 | |
| PRK05688 | 451 | fliI flagellum-specific ATP synthase; Validated | 84.29 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 84.25 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 84.24 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 84.24 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 84.2 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 84.19 | |
| TIGR03017 | 444 | EpsF chain length determinant protein EpsF. Sequen | 84.16 | |
| PF10212 | 518 | TTKRSYEDQ: Predicted coiled-coil domain-containing | 84.11 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 83.94 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 83.94 | |
| PRK15422 | 79 | septal ring assembly protein ZapB; Provisional | 83.86 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 83.8 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 83.75 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 83.66 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 83.65 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 83.65 | |
| TIGR02546 | 422 | III_secr_ATP type III secretion apparatus H+-trans | 83.61 | |
| PRK07667 | 193 | uridine kinase; Provisional | 83.59 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 83.55 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 83.53 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 83.52 | |
| PRK13764 | 602 | ATPase; Provisional | 83.51 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 83.5 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 83.5 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 83.44 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 83.39 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 83.34 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 83.27 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 83.19 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 83.09 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 83.03 | |
| TIGR01026 | 440 | fliI_yscN ATPase FliI/YscN family. This family of | 83.02 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 83.01 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 82.94 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 82.92 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 82.83 | |
| PF03215 | 519 | Rad17: Rad17 cell cycle checkpoint protein | 82.77 | |
| PRK14955 | 397 | DNA polymerase III subunits gamma and tau; Provisi | 82.7 | |
| TIGR03497 | 413 | FliI_clade2 flagellar protein export ATPase FliI. | 82.7 | |
| PRK05922 | 434 | type III secretion system ATPase; Validated | 82.68 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 82.64 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 82.63 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 82.63 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 82.33 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 82.31 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 82.31 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 82.28 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 82.24 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 82.21 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 82.11 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 82.1 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 81.98 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 81.79 | |
| COG4477 | 570 | EzrA Negative regulator of septation ring formatio | 81.77 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 81.75 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 81.71 | |
| smart00333 | 57 | TUDOR Tudor domain. Domain of unknown function pre | 81.69 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 81.68 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 81.64 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 81.63 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 81.61 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 81.61 | |
| TIGR00455 | 184 | apsK adenylylsulfate kinase (apsK). Important resi | 81.59 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 81.5 | |
| PRK00106 | 535 | hypothetical protein; Provisional | 81.49 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 81.46 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 81.45 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 81.45 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 81.45 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 81.39 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 81.28 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 81.2 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 81.11 | |
| TIGR03496 | 411 | FliI_clade1 flagellar protein export ATPase FliI. | 81.07 | |
| TIGR03689 | 512 | pup_AAA proteasome ATPase. In the Actinobacteria, | 81.07 | |
| PRK12704 | 520 | phosphodiesterase; Provisional | 81.04 | |
| PRK08727 | 233 | hypothetical protein; Validated | 81.01 | |
| TIGR02788 | 308 | VirB11 P-type DNA transfer ATPase VirB11. The VirB | 80.95 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 80.95 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 80.92 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 80.92 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 80.91 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 80.88 | |
| PF03193 | 161 | DUF258: Protein of unknown function, DUF258; Inter | 80.74 | |
| KOG0924 | 1042 | consensus mRNA splicing factor ATP-dependent RNA h | 80.74 | |
| KOG0056 | 790 | consensus Heavy metal exporter HMT1, ABC superfami | 80.73 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 80.7 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 80.6 | |
| PRK09112 | 351 | DNA polymerase III subunit delta'; Validated | 80.59 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 80.59 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 80.56 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 80.54 | |
| cd01124 | 187 | KaiC KaiC is a circadian clock protein primarily f | 80.5 | |
| PF03962 | 188 | Mnd1: Mnd1 family; InterPro: IPR005647 This family | 80.46 | |
| PRK00698 | 205 | tmk thymidylate kinase; Validated | 80.44 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 80.4 | |
| PRK14962 | 472 | DNA polymerase III subunits gamma and tau; Provisi | 80.4 | |
| TIGR00064 | 272 | ftsY signal recognition particle-docking protein F | 80.37 | |
| PRK04220 | 301 | 2-phosphoglycerate kinase; Provisional | 80.37 | |
| PRK09473 | 330 | oppD oligopeptide transporter ATP-binding componen | 80.37 | |
| PRK14959 | 624 | DNA polymerase III subunits gamma and tau; Provisi | 80.36 | |
| TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC tra | 80.35 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 80.34 | |
| TIGR03319 | 514 | YmdA_YtgF conserved hypothetical protein YmdA/YtgF | 80.34 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 80.22 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 80.22 | |
| PRK14528 | 186 | adenylate kinase; Provisional | 80.19 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 80.19 | |
| PRK14969 | 527 | DNA polymerase III subunits gamma and tau; Provisi | 80.16 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 80.09 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 80.07 | |
| PRK14963 | 504 | DNA polymerase III subunits gamma and tau; Provisi | 80.06 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-237 Score=2199.17 Aligned_cols=1362 Identities=33% Similarity=0.514 Sum_probs=1041.5
Q ss_pred CCccccccCcEEEEeCCCCCeEeEEEEEEc--CCeEEE--EecCCcEEEEecCccccCCCCC-CCCCcccccCCCCCChH
Q 000426 3 GTPVNIIVGSHVWVEDPEEAWIDGQVLKIT--GKDVEV--QTTKGKKVVANLSKIYPKDMEE-PAGGVDDMTKLSYLHEP 77 (1525)
Q Consensus 3 ~~~~~~~~g~~vwv~~~~~~w~~~~v~~~~--~~~~~v--~~~~g~~~~~~~~~~~~~~~~~-~~~~~~Dl~~L~~l~e~ 77 (1525)
|+..+..+|+.||+||.+.+|+.|.|.+.+ ++.++. ...+|..+.++...+-...... -..++||||.|+|||||
T Consensus 1 ~~~~~~~~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~P~~~~vdDLt~LSyLNEp 80 (1463)
T COG5022 1 MSTTNAEVGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVLGNDRIKLPKFDGVDDLTELSYLNEP 80 (1463)
T ss_pred CCccccccCceeeeeccccceeeeeechhhhhccccccchhhccCcccceeehhcccccccCccccCchhhhhhhccCcH
Confidence 345678999999999999999999999853 333332 2345544444443322111111 23789999999999999
Q ss_pred HHHHHHHHHhhcCccccccCCeeEEecCCCCCCCCCCHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHhcCCCcEEEecC
Q 000426 78 GVLRNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMVNEGKSNSILVSG 157 (1525)
Q Consensus 78 ~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~lp~~y~~~~~~~y~~~~~~~~~PHifavA~~Ay~~m~~~~~~QsIiisG 157 (1525)
+|||||+.||.+++||||+|.||||||||+.|| ||+.++|+.|++++..+++|||||||++||+.|...++||||||||
T Consensus 81 sVl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISG 159 (1463)
T COG5022 81 AVLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISG 159 (1463)
T ss_pred HHHHHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHHHHHHhcCCCceEEEec
Confidence 999999999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHhhcCCCccCCccHHHHHhhhchHHHhhcCcccccCCCCCcccceEEEEecCCCcccceeeee
Q 000426 158 ESGAGKTETTKMLMRYLAFLGGRTATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRT 237 (1525)
Q Consensus 158 ESGaGKTes~k~~~~yla~~~~~~~~~~~~ve~~il~snpiLEaFGNAkT~rN~NSSRfGK~i~l~f~~~g~i~Ga~i~~ 237 (1525)
||||||||+||+||+|||++++.++....+||++||++||||||||||||+||||||||||||+|.||.+|.|+||+|+|
T Consensus 160 ESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~ 239 (1463)
T COG5022 160 ESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIET 239 (1463)
T ss_pred CCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCCCceechhhhh
Confidence 99999999999999999999887766667999999999999999999999999999999999999999999999999999
Q ss_pred eeccCccccccCCCCCcceeeeeccCC-CHHhHHhcCCCCCCCCcccCCCCcccccCCCcHHHHHHHHhchhhcccCHHH
Q 000426 238 YLLERSRVCQISSPERNYHCFYLLCNA-PQEEVERYKLGNPKTFHYLNQSTCFELVGVSDAHDYLATRRAMDIVGISEKD 316 (1525)
Q Consensus 238 yLLEksRvv~q~~~ERnfHiFYql~~~-~~~~~~~~~L~~~~~~~yl~~~~~~~~~~~~d~~~f~~~~~Al~~lg~~~~~ 316 (1525)
|||||||||+|+.+|||||||||||++ +.+.++.+++..|.+|+||++|+|..++||||+++|..|+.||.++||+.++
T Consensus 240 YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~ee 319 (1463)
T COG5022 240 YLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEE 319 (1463)
T ss_pred hhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHH
Confidence 999999999999999999999999994 5555566777999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCeeeecCCCCCCcccCCchhHHHHHHHHHhcCCCHHHHHHHHhhceeecCCceEEccCChhhHHH
Q 000426 317 QEAIFRVVAAILHIGNIEFSKGKEVDSSIPKDDQAKFHLKTAAELLMCDPVALEDALCKRIMITPEEVIKRSLDPQSALV 396 (1525)
Q Consensus 317 ~~~i~~ilaaILhLGni~f~~~~~~d~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~L~~r~~~~~~e~~~~~l~~~~A~~ 396 (1525)
|.+||++||||||||||+|..+.+ +.+...+. ..++.+|.|||||++.|.+||++|.|.+++|+|.+|+|..||..
T Consensus 320 q~~IF~iLAaILhiGNIef~~~r~-g~a~~~~~---~~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~ 395 (1463)
T COG5022 320 QDQIFKILAAILHIGNIEFKEDRN-GAAIFSDN---SVLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALA 395 (1463)
T ss_pred HHHHHHHHHHHHhhcceeeeeccc-chhhcCCc---hHHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHH
Confidence 999999999999999999988654 44444443 36999999999999999999999999999999999999999999
Q ss_pred hHhhHHHHHHHHHHHHHHHhhccccccCCCCCceEEeecccccccccCCCCCcchhhhhh-------hhhhhhhhhHhhh
Q 000426 397 SRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDIYGFESFKSNSKTPLICFIIS-------CCAHVFKMEQEEY 469 (1525)
Q Consensus 397 ~rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDI~GFE~f~~NsfEQl~cINya-------fn~~vF~~eq~ey 469 (1525)
+||||||+||++||+|||++||.+|...+...+|||||||||||+|+.|||||| ||||| ||+|||++|||||
T Consensus 396 irdslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQl-CINYtNEKLQQ~Fn~h~FklEQEeY 474 (1463)
T COG5022 396 IRDSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQL-CINYTNEKLQQFFNQHMFKLEQEEY 474 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHH-HHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998777789999999999999999999999 99999 9999999999999
Q ss_pred hhcCcccccccccChHHHHHHHhc-CCCcceecchhhhcCCCCchHHHHHHHHHHhc--CCCCcccCCCCCCCeEEEecc
Q 000426 470 TKEEIDWSYIEFVDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHETFANKLYQTFK--SHKRFVKPKFSRTDFAIAHYA 546 (1525)
Q Consensus 470 ~~E~I~w~~i~f~Dn~~~ldlie~-~~~Gil~lLdee~~~p~~td~~~~~kl~~~~~--~~~~f~~p~~~~~~F~I~Hya 546 (1525)
.+|||+|++|+|.|||+||||||+ .|.|||++|||||++|.|||++|.+||++.+. +++.|.+||+....|+|+|||
T Consensus 475 ~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYA 554 (1463)
T COG5022 475 VKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYA 554 (1463)
T ss_pred HHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeec
Confidence 999999999999999999999997 25599999999999999999999999999886 467899999999999999999
Q ss_pred cceeecccCchhhhcCCCcHHHHHHHhhCCchhHhhcCCCCcccccCCCCCcchhHHHHHHHHHHHHHHccCCCeeeecc
Q 000426 547 GEVMYQSDQFLDKNKDYVVPEHQDLLSASNCPFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCV 626 (1525)
Q Consensus 547 g~V~Y~~~gfleKN~D~~~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~tv~~~f~~~L~~Lm~~l~~t~~hfIrCI 626 (1525)
|+|+|+++||++||||++++++++|+.+|+|+||+.||+...... ++++++|+|++||.||+.||++|++|+|||||||
T Consensus 555 gDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~-~K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCI 633 (1463)
T COG5022 555 GDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENIE-SKGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCI 633 (1463)
T ss_pred ccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhcc-ccCCCCcHHHHHHHHHHHHHHHHHhcCCceeEee
Confidence 999999999999999999999999999999999999998543333 4468999999999999999999999999999999
Q ss_pred CCCCCCCCccccchhhhhhhhccchhHHHHHHhhCCCCcCChHHHHHhhccccccccc-----CCccHHHHHHHHHHHhC
Q 000426 627 KPNNLLKPAVFENANIMQQLRCGGVLEAIRISCAGYPTRRPFFEFLNRFGLLAPEFLE-----GNYDEKVACKKILEKKG 701 (1525)
Q Consensus 627 kPN~~k~p~~fd~~~v~~QLr~~gvle~iri~~~Gyp~r~~~~~F~~ry~~l~~~~~~-----~~~~~~~~~~~il~~~~ 701 (1525)
|||..|+|+.||+.+|+.|||||||||+|||+|+|||+||+|++|+.||++|.|.... ...|.+.+|+.||+.+.
T Consensus 634 kPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~ 713 (1463)
T COG5022 634 KPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELV 713 (1463)
T ss_pred CCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999999999999999999997432 12467999999999987
Q ss_pred CC--CeeeccceeeccchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHhhhh
Q 000426 702 LQ--GFQIGKTKIFLRAGQMAELDARRAEILSSAAKTIQRRIRTHIARRRFIALREATIVLQSLCRGRLACRVFDSMKKE 779 (1525)
Q Consensus 702 ~~--~~~~G~TkVF~r~~~~~~LE~~R~~~l~~aa~~IQ~~~R~~~~Rk~y~~~r~aai~IQ~~~Rg~laRk~~~~~r~~ 779 (1525)
++ .||+|+||||||+|+++.||++|+..++.+++.||+.|||++.|++|.+..+.+..+|...+|++.|+++..--.-
T Consensus 714 id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~ 793 (1463)
T COG5022 714 IDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKW 793 (1463)
T ss_pred CChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHH
Confidence 76 5999999999999999999999999999999999999999999999999999999999999999999887766667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000426 780 AAAVKIQKHIRRYDARTAYKRLHVSTLVLQ-TGLRTMAARKEFRFRKQTKAAIIIQARWRCHKATAYYKRLKRGSIKAQT 858 (1525)
Q Consensus 780 ~AAi~IQk~~R~~~~Rr~y~~~r~a~i~IQ-s~~Rg~~aRr~~~~~~~~~AAi~IQ~~~R~~~ar~~y~~~r~a~i~iQ~ 858 (1525)
.+++.+|..||....|+.|...-..++.+| ..+|+...+.........++++.+|+.||.+..+++|..+.+.++.+|+
T Consensus 794 ~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~ 873 (1463)
T COG5022 794 RLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQS 873 (1463)
T ss_pred HhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHH
Confidence 799999999999999999999999999999 5556666665455666789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000426 859 RWRGRIARRELRKLKMAARETGALKEAKDKLQKTVEDLTWRIQLEKRLRTDLEEAKAQEVTKLQNSLQEMQAKLDEANAS 938 (1525)
Q Consensus 859 ~~R~~~ARkel~~lk~~ar~~~~l~~~~~~Le~kv~el~~rl~~ek~~r~~le~ak~~E~~kLq~~l~elq~qlee~~~~ 938 (1525)
.+|...|++++..++.+.+++.++...+..|+.++.++...+.......... +.+....|+.-+...+
T Consensus 874 ~~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~~~~~~---k~e~~a~lk~~l~~~d--------- 941 (1463)
T COG5022 874 AQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEF---KTELIARLKKLLNNID--------- 941 (1463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhhhhhHH---HHHHHHHHHHHhhccc---------
Confidence 9999999999999999999999999999999999988876554311110000 0111111211111100
Q ss_pred HHHHHHHHHHHHHhCChhhhhHHHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000426 939 LVKEREAAKKAIEEAPPVVKEKEVLVEDTKKIESLTAEVEGLKTALESEKKRADETERKSKEAQETSEEKQKKLDETEKK 1018 (1525)
Q Consensus 939 l~~e~e~~~~~l~e~~~~~~e~~~l~~~~~~~~~L~~e~~~L~~el~~le~~~~ele~~~~e~~~~~e~~~~~l~ele~~ 1018 (1525)
+++. .. .+.. ...++.+|.....+++......+. +-++......+......++....++
T Consensus 942 -----------~~~~-~~-~~~~----~~~~~~~l~~~~~~l~~~~~~~~~----~~k~~~~~~~~~~~~~~el~~~~~~ 1000 (1463)
T COG5022 942 -----------LEEG-PS-IEYV----KLPELNKLHEVESKLKETSEEYED----LLKKSTILVREGNKANSELKNFKKE 1000 (1463)
T ss_pred -----------ccch-hH-HHHH----hhHHHHHHHHHHHHHHHHHHHHHH----HHHHhhHHHHhcccHHHHHHHHHHH
Confidence 0000 00 0000 001222232222222222222111 1111111111111111122222222
Q ss_pred HHHHHHHHHHHHHHHHhhHHH---HHHHHHHhhhcCCcccccccchhhhccCCCCCCCCCCCCcccccccCcCCCCCccc
Q 000426 1019 VIQLQESLTRLEEKLANLESE---NQVLRQQAVSIAPNKFLSGRSRSIIQRGADSGHIPGDAKSTLDLHSSSINHRDPLE 1095 (1525)
Q Consensus 1019 ~~~Lq~~l~~LEeki~~Le~E---~~~Lrqq~~~~~~~~~ls~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1095 (1525)
+.....+...+.++.+.++.. +..+........ .... ......+..... +... ........+..
T Consensus 1001 l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~~---s~~~---~~~~~~~~~~~~-~~~~-----~~~~~l~~~~~- 1067 (1463)
T COG5022 1001 LAELSKQYGALQESTKQLKELPVEVAELQSASKIIS---SEST---ELSILKPLQKLK-GLLL-----LENNQLQARYK- 1067 (1463)
T ss_pred HHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhhc---cchh---hhhccCcccchh-hhhh-----HHHHHhhhhHh-
Confidence 222222222222222222222 222221110000 0000 000000000000 0000 00000000000
Q ss_pred cccccccc--chH----HHhhcHHHHHHHhh-hcCCCCC---CCChhHHHHHHHHhhhcc-hhhhhhHHHHHHHHHHHHH
Q 000426 1096 IEEKPQKS--LNE----KQQENQELLIRCIA-QHLGFAG---NRPIAACIIYKCLLQWRS-FEVERTSVFDRIIQTIGNA 1164 (1525)
Q Consensus 1096 ~e~klqr~--l~E----~qqEn~dLli~~l~-~~~gf~~---~~p~~A~ilf~cl~~w~~-~~~e~~~l~~~ii~~I~~~ 1164 (1525)
..+.++. +.+ .+.+...-+.+.+. .++...+ .+|. ..+.|...-+|++ ...+...++...+..+..+
T Consensus 1068 -~l~~~r~~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~k~~l~~~~~~~~~~~~~~le~~ 1145 (1463)
T COG5022 1068 -ALKLRRENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPA-NVLQFIVAQMIKLNLLQEISKFLSQLVNTLEPV 1145 (1463)
T ss_pred -hhhhcCcccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchh-hHHHHHHHHhhccchHHhhhhHHHHHHhhccch
Confidence 0001110 110 11222222222222 2121211 1222 3344555567776 4455556666666666666
Q ss_pred Hhc--cCCC-cccceehHhHHHHHHHHHHHhhhcCCCCCCCccCCCCcchhhhcccccccCCCCCcccccccCCcCCCcc
Q 000426 1165 IET--QDNN-DILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGTPQGVNLSLINGGVNGGVD 1241 (1525)
Q Consensus 1165 i~~--~~d~-~~layWLSNt~~Ll~~lq~~l~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1241 (1525)
... .++. -.+.||.+|...+++.--- ....+.+ ++ + ....+.. ..+..+
T Consensus 1146 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-------~~~~~~~-------~~----~-----~~~~d~~-----~~~s~s 1197 (1463)
T COG5022 1146 FQKLSVLQLELDGLFWEANLEALPSPPPF-------AALSEKR-------LY----Q-----SALYDEK-----SKLSSS 1197 (1463)
T ss_pred hccccchhccccccccccccccCCCCCch-------hhcchhh-------hh----H-----hhhhccc-----ccccHH
Confidence 554 2222 3367999999887531000 0000000 00 0 0000100 000001
Q ss_pred chhhhhhcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCCCCCCCccccCCCccccchhhhhhhhhhHHHHH
Q 000426 1242 TLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANSAAQQALIAHWQGIV 1321 (1525)
Q Consensus 1242 ~~~~v~~~~~~~~fkqqL~~~~~~iy~~l~~~l~k~l~plL~~~i~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~il 1321 (1525)
.....+..+.++..++|..|.... .+.+++.+.+ .|..-.......++ ++.....+...+.++++
T Consensus 1198 ---------~v~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ll 1262 (1463)
T COG5022 1198 ---------EVNDLKNELIALFSKIFSGWPRGD--KLKKLISEGW-VPTEYSTSLKGFNN---LNKKFDTPASMSNEKLL 1262 (1463)
T ss_pred ---------HHHHHHHHHHHHHHhccccchhhh--hhhhhhhhcc-chhhhccccccccc---hhhcccCcccCcHHHHH
Confidence 112346788888888999887654 3333332211 11110000000000 01111122345778999
Q ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHhHhHHHHHhhhccCCCCCccchhHHhhchHHHHHHHhhcCcccccchHhhh
Q 000426 1322 KSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDEL 1401 (1525)
Q Consensus 1322 ~~L~~~~~~l~~~~v~~~li~q~f~Qlf~fIn~~lfN~LllRr~~Cs~s~G~qir~nls~LE~W~~~~~~~~~~~a~~~L 1401 (1525)
.+++.+.+.++.+.+.+.+....++++.-++|+.+||.|-.|+.--+|+.|.++.||.+.+++||+.++ ...+..+|
T Consensus 1263 ~~~n~i~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~~~~---i~~~~~~l 1339 (1463)
T COG5022 1263 SLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFE---ISDVDEEL 1339 (1463)
T ss_pred HHHHHHHHHHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHHhhc---ccchHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 45566899
Q ss_pred hhHHHHHHHHhhcCCCcCCHhHHHhccCCCCCHHHHHHHHhcCccCCCCCccCCHHHHHHHHhhhh
Q 000426 1402 KHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISNMRVLMT 1467 (1525)
Q Consensus 1402 ~~l~Qa~~lL~~~~k~~~~~~~i~~~~C~~Ls~~QI~kil~~Y~~d~~e~~~Vs~~~i~~~~~~~~ 1467 (1525)
++++||++.+++.+++...++++ .+.|.+|+|.||.+|+.+|.+.++| .++|.+|..+|.+...
T Consensus 1340 ~~l~q~~k~~~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ke~~~~~~a~~~ 1403 (1463)
T COG5022 1340 EELIQAVKVLQLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLPKEILKKIEALLI 1403 (1463)
T ss_pred HHHHhhhhhhhhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCChHHHHHHHhhhhh
Confidence 99999999999987777777777 6999999999999999999999998 5999999977755544
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >PRK07196 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >PRK08472 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PRK08972 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >PF14915 CCDC144C: CCDC144C protein coiled-coil region | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >COG3074 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >KOG2891 consensus Surface glycoprotein [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >PRK06315 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK07721 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PRK09099 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10869 recombination and repair protein; Provisional | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >PRK12608 transcription termination factor Rho; Provisional | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PRK06002 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PRK06936 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK05688 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >TIGR03017 EpsF chain length determinant protein EpsF | Back alignment and domain information |
|---|
| >PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PRK15422 septal ring assembly protein ZapB; Provisional | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR01026 fliI_yscN ATPase FliI/YscN family | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >PF03215 Rad17: Rad17 cell cycle checkpoint protein | Back alignment and domain information |
|---|
| >PRK14955 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR03497 FliI_clade2 flagellar protein export ATPase FliI | Back alignment and domain information |
|---|
| >PRK05922 type III secretion system ATPase; Validated | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >smart00333 TUDOR Tudor domain | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00455 apsK adenylylsulfate kinase (apsK) | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK00106 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR03496 FliI_clade1 flagellar protein export ATPase FliI | Back alignment and domain information |
|---|
| >TIGR03689 pup_AAA proteasome ATPase | Back alignment and domain information |
|---|
| >PRK12704 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >KOG0924 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >PRK09112 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs | Back alignment and domain information |
|---|
| >PF03962 Mnd1: Mnd1 family; InterPro: IPR005647 This family of proteins includes meiotic nuclear division protein 1 (MND1) from Saccharomyces cerevisiae (Baker's yeast) | Back alignment and domain information |
|---|
| >PRK00698 tmk thymidylate kinase; Validated | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >PRK14962 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00064 ftsY signal recognition particle-docking protein FtsY | Back alignment and domain information |
|---|
| >PRK04220 2-phosphoglycerate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional | Back alignment and domain information |
|---|
| >PRK14959 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >PRK14528 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK14969 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >PRK14963 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1525 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 1e-172 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-166 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-166 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-165 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 1e-165 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 1e-165 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-165 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-165 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-165 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 1e-165 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 1e-165 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-165 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-165 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-165 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 1e-164 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-164 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-164 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-164 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-164 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-164 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-164 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-163 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-163 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-156 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-154 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-154 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-153 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-133 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-133 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-133 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-130 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-130 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-130 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-130 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 1e-130 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-130 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-129 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-129 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-129 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-129 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-129 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-129 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-129 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-129 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-129 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 1e-128 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-128 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-126 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-125 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-122 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-122 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-122 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 1e-122 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-122 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-120 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 1e-120 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-119 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-113 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-109 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-109 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1274 bits (3299), Expect = 0.0
Identities = 392/1098 (35%), Positives = 571/1098 (52%), Gaps = 75/1098 (6%)
Query: 4 TPVNIIVGSHVWVEDPEEAWIDGQVLKITGKDVEVQTTKGKKVVANLSKIYPKDMEEPAG 63
+ VW+ DPEE W ++LK +V + ++ + PK E P
Sbjct: 3 ASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELPPL 62
Query: 64 -------GVDDMTKLSYLHEPGVLRNLKTRY-ELNEIYTYTGNILIAINPFQRLPHIYDA 115
G +D+T LSYLHEP VL NLK R+ + IYTY G +L+AINP+++LP IY
Sbjct: 63 RNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGE 121
Query: 116 HMMQQYKGAPFGELSPHVFAVADVAYRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLA 175
++ Y G G++ PH+FAVA+ AY+ M + ++ SI+VSGESGAGKT + K MRY A
Sbjct: 122 DIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFA 181
Query: 176 FLGGRTATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAI 235
+ G VE++VL SNP++E+ GNAKT RN+NSSRFGK++EI FDK+ RI GA +
Sbjct: 182 TVSGSA--SEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANM 239
Query: 236 RTYLLERSRVCQISSPERNYHCFY-LLCNAPQEEVERYKLGNPKTFHYLNQSTCFELVGV 294
RTYLLE+SRV + ERNYH FY L +A E + +LGN FHY Q + G+
Sbjct: 240 RTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGI 299
Query: 295 SDAHDYLATRRAMDIVGISEKDQEAIFRVVAAILHIGNIEFSKGKEVDSSIPKDDQAKFH 354
DA + + TR+A ++GIS+ Q IFR++A ILH+GN+EF+ +IP
Sbjct: 300 DDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHD---P 356
Query: 355 LKTAAELLMCDPVALEDALCKRIMITPEEVIKRSLDPQSALVSRDGLAKTIYSRLFDWLV 414
L +L+ D + LC R + T E + + A+ +RD LAK IY+ LF+W+V
Sbjct: 357 LTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIV 416
Query: 415 DKINSSIGQDPNSKSLIGVLDIYGFESFKSNSKTPLIC-----------FIISCCAHVFK 463
D +N ++ S IGVLDIYGFE+F+ NS C F HVFK
Sbjct: 417 DHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQF-CINYANEKLQQQFN----MHVFK 471
Query: 464 MEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQT 523
+EQEEY KE+I W+ I+F DNQ ++LIE K G ++ LLDE C PK + +T+A KLY T
Sbjct: 472 LEQEEYMKEQIPWTLIDFYDNQPCINLIEAKMG-VLDLLDEECKMPKGSDDTWAQKLYNT 530
Query: 524 F-KSHKRFVKPKFSRTDFAIAHYAGEVMYQSDQFLDKNKDYVVPEHQDLLSAS-NCPFVA 581
F KP+ S F I H+A +V YQ + FL+KNKD V E +L +S +
Sbjct: 531 HLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590
Query: 582 GLFPPLPEETS---------------------------KSSKFSSIGSRFKLQLQQLMDT 614
LF + S ++G +F+ L LM+T
Sbjct: 591 ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMET 650
Query: 615 LNSTEPHYIRCVKPNNLLKPAVFENANIMQQLRCGGVLEAIRISCAGYPTRRPFFEFLNR 674
LN+T PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R + EF +R
Sbjct: 651 LNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSR 710
Query: 675 FGLLAPEFLEGNYDEKVACKKILEKKGL--QGFQIGKTKIFLRAGQMAELDARRAEILSS 732
+ +L + + D K CK +LEK L +Q GKTKIF RAGQ+A L+ RA+ L +
Sbjct: 711 YRVLMKQ-KDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRA 769
Query: 733 AAKTIQRRIRTHIARRRFIALREATIVLQSLCRGRLACRVFDSMKKEAAAVKIQKHIRRY 792
A IQ+ IR + R++++ +R A I +Q RG A +++ AA+ IQK R Y
Sbjct: 770 ACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMY 829
Query: 793 DARTAYKRLHVSTLVLQTGLRTMAARKEFRFRKQTKAAIIIQARWRCHKATAYYKRLKRG 852
R Y+ + +T+ LQ LR R +++ + +IIIQ R A +Y R +
Sbjct: 830 VVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKA 889
Query: 853 SIKAQTRWRGRIARRELRKLKMAARETGALKEAKDKLQKTVEDLTWRIQLEKRLRTDLEE 912
+ Q +R +A+REL+KLK+ AR K+ L+ + L +I + + L E
Sbjct: 890 IVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLE 949
Query: 913 AKAQEVTKLQNSLQEMQAKLDEANASLVKEREAAKKAIEEAPPVVKE----KEVLVEDTK 968
L+ + KL L E AK A + +E ++ L +
Sbjct: 950 KMN----NLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQT 1005
Query: 969 KIESLTAEVEGLKTALESEKKRADETERKSKEAQETSEEKQKKLDETEKKVIQLQESLTR 1028
+ +++ + K E E K + EE +++ + K++ + E
Sbjct: 1006 EKKTIEEWADKYKHETEQLVSELKEQNTLLKTEK---EELNRRIHDQAKEITETMEKKLV 1062
Query: 1029 LEEKLANLESENQVLRQQ 1046
E K L+ ++ LR Q
Sbjct: 1063 EETKQLELDLNDERLRYQ 1080
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 | Back alignment and structure |
|---|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
| >2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 154 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 154 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 154 | Back alignment and structure |
|---|
| >1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1 Length = 602 | Back alignment and structure |
|---|
| >2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1 Length = 147 | Back alignment and structure |
|---|
| >2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1 Length = 147 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 135 | Back alignment and structure |
|---|
| >2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 135 | Back alignment and structure |
|---|
| >4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A {Helicobacter pylori} Length = 877 | Back alignment and structure |
|---|
| >3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae} Length = 152 | Back alignment and structure |
|---|
| >1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 | Back alignment and structure |
|---|
| >3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens} Length = 273 | Back alignment and structure |
|---|
| >3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens} Length = 130 | Back alignment and structure |
|---|
| >4f61_I Stathmin-like domain R4; alpha-tubulin, beta-tubulin, GTPase, microtubule, RB3, stath tubulin, cell cycle; HET: GTP GDP; 4.17A {Artificial gene} Length = 240 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1525 | ||||
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 3e-06 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 5e-06 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 0.0 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d2ap3a1 | 185 | a.24.27.1 (A:12-196) Hypothetical protein MW0975 ( | 2e-05 | |
| d2mysa1 | 46 | b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal | 6e-05 | |
| d1br2a1 | 46 | b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal | 0.001 | |
| d1kk8a1 | 48 | b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal | 0.001 | |
| d1w7ja1 | 58 | b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal d | 0.002 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 755 bits (1951), Expect = 0.0
Identities = 275/787 (34%), Positives = 422/787 (53%), Gaps = 47/787 (5%)
Query: 29 LKITGKDVEVQTTKGKKVVA--NLSKIYPKDMEEPAGGVDDMTKLSYLHEPGVLRNLKTR 86
+ + D + KK++ + + P E ++DM ++YL+E VL NL++R
Sbjct: 3 IDFSDPDFQYLAVDRKKLMKEQTAAFMNPPKFE----KLEDMANMTYLNEASVLYNLRSR 58
Query: 87 YELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMVN 146
Y IYTY+G IA+NP++RLP IY ++ +Y+G E+ PH+F+VAD AY+ MV
Sbjct: 59 YTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVT 117
Query: 147 EGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRTATEGR--------TVEQQVLESNPV 198
+ ++ S L++GESGAGKTE TK ++ YLA + + ++E Q++++NPV
Sbjct: 118 DRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPV 177
Query: 199 LEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLERSRVCQISSPERNYHCF 258
LEA+GNAKT RNNNSSRFGKF+ I F G+I+GA I TYLLE+SRV S ERNYH F
Sbjct: 178 LEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIF 237
Query: 259 YLLCNAPQEEVERYKLGNP--KTFHYLNQSTCFELVGVSDAHDYLATRRAMDIVGISEKD 316
Y +C+ E+ L P + ++NQ C + + D ++ A DI+G ++++
Sbjct: 238 YQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEE 296
Query: 317 QEAIFRVVAAILHIGNIEFSKGKEVDSSIPKDDQAKFHLKTAAELLMCDPVALEDALCKR 376
++++F+ A+ILH+G ++F + + + + A L + L AL K
Sbjct: 297 KQSMFKCTASILHMGEMKFKQRPREEQAESDGTA---EAEKVAFLCGINAGDLLKALLKP 353
Query: 377 IMITPEEVIKRSLDPQSALVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDI 436
+ E++ + + + S LAK++Y R+F+WLV ++N ++ IGVLDI
Sbjct: 354 KVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDI 413
Query: 437 YGFESFKSNSKTPLI------CFIISCCAHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDL 490
GFE F NS L H+F +EQEEY KE I W +I+F + +
Sbjct: 414 AGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCID 473
Query: 491 IEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKSHKRF-------VKPKFSRTDFAIA 543
+ +KP GI+++L+E CMFPK+ ++F +KLYQ R +P F +
Sbjct: 474 LIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELH 533
Query: 544 HYAGEVMYQSDQFLDKNKDYVVPEHQDLLSASNCPFVAGLFPPLPEET-------SKSSK 596
HYAG V Y +L+KNKD + LL AS P VA LF E KSS
Sbjct: 534 HYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSA 593
Query: 597 FSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNLLKPAVFENANIMQQLRCGGVLEAIR 656
F +I + + L +LM L ST PH++RC+ PN L +P + + ++ QL+C GVLE IR
Sbjct: 594 FQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIR 653
Query: 657 ISCAGYPTRRPFFEFLNRFGLLAPEFL-EGNYDEKVACKKILEKKGLQG--FQIGKTKIF 713
I G+P+R + EF R+ +LAP + +G D K +KIL + +++G TK+F
Sbjct: 654 ICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVF 713
Query: 714 LRAGQMAELDARRAEILSSAAKTIQRRIRTHIARRRFIALRE---ATIVLQSLCRGRLAC 770
+AG + L+ R E LS Q IR ++ R+ + L++ V+Q R L
Sbjct: 714 FKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVL 773
Query: 771 RVFDSMK 777
R + K
Sbjct: 774 RNWQWWK 780
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]} Length = 185 | Back information, alignment and structure |
|---|
| >d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 46 | Back information, alignment and structure |
|---|
| >d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 46 | Back information, alignment and structure |
|---|
| >d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 48 | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 58 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1525 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 98.3 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 98.27 | |
| d1w7ja1 | 58 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.92 | |
| d1br2a1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.35 | |
| d2mysa1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.22 | |
| d1kk8a1 | 48 | Myosin S1 fragment, N-terminal domain {Bay scallop | 96.92 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 93.48 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 92.37 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 91.68 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 91.44 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 90.78 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 89.93 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 87.68 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 87.0 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 86.46 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 86.16 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 85.05 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 84.99 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 84.21 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 83.58 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 83.43 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 82.31 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 82.08 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 82.07 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 81.78 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 81.61 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 80.36 | |
| d1a5ta2 | 207 | delta prime subunit of DNA polymerase III, N-domai | 80.23 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1648.28 Aligned_cols=722 Identities=35% Similarity=0.626 Sum_probs=661.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCC
Q ss_conf 65569989999994653379999958899999997511862113588068726787898988889999720799888881
Q 000426 52 KIYPKDMEEPAGGVDDMTKLSYLHEPGVLRNLKTRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSP 131 (1525)
Q Consensus 52 ~~~~~~~~~~~~~~~Dl~~L~~l~e~~vL~~L~~Ry~~~~iYT~~G~iLiavNP~~~lp~ly~~~~~~~y~~~~~~~l~P 131 (1525)
..+++||+ ...++|||+.|++||||+|||||+.||..+.||||+|++|||||||+.+| +|++++++.|+++..+++||
T Consensus 27 ~~~~~np~-~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~-ly~~~~~~~y~~~~~~~~pP 104 (794)
T d2mysa2 27 KPFDMNPP-KYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPP 104 (794)
T ss_dssp SCCCCCCT-TSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCG-GGCTTHHHHTTTCCTTSSCS
T ss_pred CCCCCCCC-CCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCC
T ss_conf 88789986-33476310078879889999999999768996245788899978998899-99999999970898899998
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC--------CCCCCHHHHHHHHCHHHHHHC
Q ss_conf 377899999999885399907985598899746999999999986027776--------688508788862102997404
Q 000426 132 HVFAVADVAYRAMVNEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRTA--------TEGRTVEQQVLESNPVLEAFG 203 (1525)
Q Consensus 132 HifavA~~Ay~~m~~~~~~QsIiisGESGaGKTes~k~il~yla~~~~~~~--------~~~~~ie~~il~snpilEAFG 203 (1525)
||||||+.||+.|..+++||||||||||||||||++|++|+||+.+++++. .....++++|+++||||||||
T Consensus 105 HifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFG 184 (794)
T d2mysa2 105 HIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFG 184 (794)
T ss_dssp CHHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 08999999999998749980799971798878999999999999870778775311135556749999997626999854
Q ss_pred CCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCC-CCHHHHHHCCCC-CCCCCC
Q ss_conf 754456789886542589976599960012564320267432335899972026620467-998769742899-988774
Q 000426 204 NAKTVRNNNSSRFGKFVEIQFDKQGRISGAAIRTYLLERSRVCQISSPERNYHCFYLLCN-APQEEVERYKLG-NPKTFH 281 (1525)
Q Consensus 204 NAkT~rN~NSSRfGK~i~l~f~~~g~i~Ga~i~tyLLEksRv~~q~~~ERnyHIFYql~~-~~~~~~~~l~L~-~~~~~~ 281 (1525)
||||++||||||||||++|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.+.|. ++.+|+
T Consensus 185 NAkT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~ 264 (794)
T d2mysa2 185 NAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYH 264 (794)
T ss_dssp EECCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCG
T ss_pred CCCCCCCCCHHHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHH
T ss_conf 87556668720111013667779997866899998537853773476544199999998399999999862689877723
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 45799942236989699999998102143668889999999999998523704514887777655880018999999873
Q 000426 282 YLNQSTCFELVGVSDAHDYLATRRAMDIVGISEKDQEAIFRVVAAILHIGNIEFSKGKEVDSSIPKDDQAKFHLKTAAEL 361 (1525)
Q Consensus 282 yl~~~~~~~~~~~dD~~~f~~~~~Al~~lG~~~~e~~~i~~ilaaILhLGni~f~~~~~~d~~~~~~~~~~~~l~~~a~L 361 (1525)
||++|.+ .++++||+++|..++.||.+|||+++++..||+|||||||||||+|....+.+.+.+.+. ..++.+|.|
T Consensus 265 yl~~~~~-~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~---~~~~~~a~L 340 (794)
T d2mysa2 265 YVSEGEI-TVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGT---EVADKAAYL 340 (794)
T ss_dssp GGCSSCC-CCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCS---SHHHHHHHH
T ss_pred HCCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCH---HHHHHHHHH
T ss_conf 3179980-469977699999999999980999999999999888875101116752477421223663---799999988
Q ss_pred CCCCHHHHHHHHHHCEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 18898999999846045228854873699445988675499999999987889860012455789871577621466544
Q 000426 362 LMCDPVALEDALCKRIMITPEEVIKRSLDPQSALVSRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDIYGFES 441 (1525)
Q Consensus 362 Lgv~~~~L~~~L~~r~~~~~~e~i~~~l~~~~A~~~rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~ 441 (1525)
|||+.++|.++|+++.+.++++.+++++++.+|.++||||||+||++||+|||.+||.++.+......+||||||||||+
T Consensus 341 Lgi~~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~ 420 (794)
T d2mysa2 341 MGLNSAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEI 420 (794)
T ss_dssp HTCCHHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCC
T ss_pred HCCCHHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC
T ss_conf 19798895304105689833665046388999988999899999999999999876632066777651789853255554
Q ss_pred CCCCCCCCCHHHHHH-------HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCHHHHCCCCCCHH
Q ss_conf 668888753024444-------2212334338665203864211343584989998731878421211222049998448
Q 000426 442 FKSNSKTPLICFIIS-------CCAHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHE 514 (1525)
Q Consensus 442 f~~NsfEQl~cINya-------f~~~vf~~eqeey~~E~I~w~~i~f~dn~~~idlie~~~~Gil~lLdee~~~p~~td~ 514 (1525)
|+.|||||| ||||| ||+|+|+.||++|.+|||+|..|+|.||++++++++.+|.|||++|||||++|+|||+
T Consensus 421 f~~NsfEQL-cINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~ 499 (794)
T d2mysa2 421 FDFNSFEQL-CINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDT 499 (794)
T ss_dssp CSSBCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHH
T ss_pred CCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHH
T ss_conf 456638899-9999999999999999999899999754877656777798799999984853279999886147665188
Q ss_pred HHHHHHHHHH-CCCCCCCCCCCC----CCCEEEEECCCCEEECCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHCCCCCCC
Q ss_conf 9999999871-399883358899----99908980265013314370233059893879999830880567410999964
Q 000426 515 TFANKLYQTF-KSHKRFVKPKFS----RTDFAIAHYAGEVMYQSDQFLDKNKDYVVPEHQDLLSASNCPFVAGLFPPLPE 589 (1525)
Q Consensus 515 ~~~~kl~~~~-~~~~~~~~p~~~----~~~F~I~Hyag~V~Y~~~gfl~kN~D~~~~~~~~ll~~S~~~~i~~lf~~~~~ 589 (1525)
+|++|++.+| ++++.|.+|... +..|+|+||||+|+|+++||++||+|.++++++.+++.|++++++.||+....
T Consensus 500 ~f~~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~ 579 (794)
T d2mysa2 500 SFKNKLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGG 579 (794)
T ss_dssp HHHHHHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC--
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf 99999998735788563688756787887168983076360441265775558443799999986798899986640244
Q ss_pred CCC----------CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf 545----------8888755059999999999999713798046516998888985455300021420246368899984
Q 000426 590 ETS----------KSSKFSSIGSRFKLQLQQLMDTLNSTEPHYIRCVKPNNLLKPAVFENANIMQQLRCGGVLEAIRISC 659 (1525)
Q Consensus 590 ~~~----------~~~~~~tv~~~f~~~L~~Lm~~l~~t~~hfIrCIkPN~~~~p~~fd~~~v~~QLr~~gvle~iri~~ 659 (1525)
.+. +++++.||+++|+.||+.||++|++|+||||||||||+.+.|+.||...|++||||+||||+|||++
T Consensus 580 ~~~~~~~~~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r 659 (794)
T d2mysa2 580 EAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICR 659 (794)
T ss_dssp ------------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHH
T ss_conf 33356677687777875240899999999999998756898688864688655876435699999998627899999996
Q ss_pred HCCCCCCCHHHHHHHHCCCCCCCCC--CCCCHHHHHHHHHHHHCCC--CEEECCCEEECCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 0899767867799852014625336--8922799999988770999--70322304403101789999999987679999
Q 000426 660 AGYPTRRPFFEFLNRFGLLAPEFLE--GNYDEKVACKKILEKKGLQ--GFQIGKTKIFLRAGQMAELDARRAEILSSAAK 735 (1525)
Q Consensus 660 ~Gyp~r~~~~~F~~ry~~l~~~~~~--~~~~~~~~~~~il~~~~~~--~~~~G~tkVFlr~~~~~~Le~~r~~~l~~aa~ 735 (1525)
.|||+|++|.+|+.||++|+|.... ...|.+++|+.||..++++ .|++|+||||||++++..||.+|.+.+..+++
T Consensus 660 ~Gyp~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~ 739 (794)
T d2mysa2 660 KGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIIT 739 (794)
T ss_dssp TSCCCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 68986364999999999858342445566899999999999669781358717975986743999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999989999899999999999987741014589998545678999889999999999978731
Q 000426 736 TIQRRIRTHIARRRFIALREATIVLQSLCRGRLACRVFDSMKKEAAAVKIQKHIRRYDARTAYKRLH 802 (1525)
Q Consensus 736 ~IQ~~~R~~l~Rk~y~~~r~aai~IQ~~~Rg~laR~~~~~~r~~~AAi~IQk~~R~~~~Rk~y~~~r 802 (1525)
.||++||||++|++|++++. +..|+++||++||+|++||.|.++|
T Consensus 740 ~IQ~~~Rg~l~Rk~~~~~~~----------------------~r~a~~~IQ~~~R~~~~~r~~~~~r 784 (794)
T d2mysa2 740 ATQARCRGFLMRVEYRAMVE----------------------RRESIFCIQYNVRSFMNVKHWPWMK 784 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 99999999999999999999----------------------9999999999999999982369999
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|