Citrus Sinensis ID: 000442
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1507 | 2.2.26 [Sep-21-2011] | |||||||
| P54697 | 2245 | Myosin-J heavy chain OS=D | yes | no | 0.613 | 0.412 | 0.416 | 0.0 | |
| Q02440 | 1829 | Unconventional myosin-Va | yes | no | 0.677 | 0.558 | 0.394 | 0.0 | |
| Q99104 | 1853 | Unconventional myosin-Va | yes | no | 0.675 | 0.549 | 0.391 | 0.0 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | yes | no | 0.684 | 0.556 | 0.392 | 0.0 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | yes | no | 0.674 | 0.556 | 0.391 | 0.0 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | no | no | 0.729 | 0.594 | 0.359 | 0.0 | |
| P21271 | 1818 | Unconventional myosin-Vb | no | no | 0.618 | 0.512 | 0.390 | 0.0 | |
| Q875Q8 | 1554 | Myosin-2 OS=Lachancea klu | N/A | no | 0.888 | 0.861 | 0.325 | 0.0 | |
| P70569 | 1846 | Unconventional myosin-Vb | no | no | 0.726 | 0.593 | 0.360 | 0.0 | |
| Q875X3 | 1567 | Myosin-2A OS=Naumovozyma | yes | no | 0.673 | 0.647 | 0.381 | 0.0 |
| >sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 | Back alignment and function desciption |
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Score = 767 bits (1980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/1017 (41%), Positives = 597/1017 (58%), Gaps = 92/1017 (9%)
Query: 10 GSIVWTEDPEEAWIDGEV---EEVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDD 66
G+ VW D E WI +V E + + + + + V S V+ K+P+ + GVDD
Sbjct: 27 GAGVWIPDQELGWIGADVIEHSETSADQVLVRTEDDREVKIPLSKVFQKNPDILE-GVDD 85
Query: 67 MTKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLG 126
++ L++LHEP +L NL RY++N+IYTY G ILIA+NP+ LP LY M+ Y G LG
Sbjct: 86 LSFLSHLHEPAILHNLHHRYNLNQIYTYIGKILIAINPYTSLP-LYGKEMISAYYGKQLG 144
Query: 127 ELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGG-------- 178
L+PH +A+A+ A++ M +G SQSILVSGESGAGKTE+TK L+QY A MG
Sbjct: 145 TLAPHVYAVAEDAFKDMRYDGTSQSILVSGESGAGKTETTKFLLQYFAAMGNMIKESTSS 204
Query: 179 ------RTATE----------------KQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFG 216
T+++ +SVE++VLES P+LEAFGNAKTLRN+NSSRFG
Sbjct: 205 SSINGINTSSDGIPVTPPPSPMKKSPVDKSVEERVLESTPLLEAFGNAKTLRNDNSSRFG 264
Query: 217 KFVELQFDERGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAGPAEDI-EKYKLGN 275
KF+E+ F+E G I GA I TYLLE+SR+ + ERNYH FY L +G +E++ EK L
Sbjct: 265 KFIEIHFNEMGSIIGAKILTYLLEKSRIVRQVYNERNYHIFYQLLSGASEELKEKLNLKT 324
Query: 276 PRMFHYLNQSNFYELDGVDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFA 335
+ YLN+S +E++GV + + + KT AM+V GI EQ+ +FR+++AIL +GN EF
Sbjct: 325 IEEYSYLNKSGCFEIEGVSDEEHFNKTCHAMQVAGITLVEQENVFRILSAILLIGNFEFE 384
Query: 336 K--GEEADSSEPKDEKSRSHLKTAAELFMCDE-KSLEDSMCKRVIMTRDESITKWLDPAA 392
G DS + D R L+ + L C + L +SM R ++T ES
Sbjct: 385 NIAGSNDDSCQLID---RDPLEKVSVLLGCAQPDELLNSMLTRKVVTGKESYISHNTKER 441
Query: 393 AALNRDALAKIVYSRLFDWLVNKINN--TIGQDPNSKVLIGVLDIYGFESFKTNSFEQFC 450
A RD+L+ +Y +FDWLV KIN+ +I SK IGVLDIYGFESF+ N FEQFC
Sbjct: 442 AENARDSLSMFLYGMMFDWLVVKINSSMSISTQQKSKSFIGVLDIYGFESFEVNGFEQFC 501
Query: 451 INLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEA 510
IN NEKLQQ FNQHVFK EQ+EY +E+IDWSYI+F DNQD LDLIEKKP I+ LLDE
Sbjct: 502 INYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYIDFNDNQDTLDLIEKKPICILTLLDEE 561
Query: 511 CMFPRSTHETFAQKLYQTFKDHKRFSKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVV 570
MFP++T +T A KLY H +F KP+ S T FTI HYAG VTY+T+ FLDKNKD+++
Sbjct: 562 TMFPKATPQTLATKLYSKMTSHSKFEKPRFSSTAFTINHYAGKVTYETDQFLDKNKDFII 621
Query: 571 PEHQAVLSASGCPFVSGLFP------------------PLTEES-----SKSSKFSSIGS 607
PE ++L S F+ L P + + S S KF S+GS
Sbjct: 622 PEQISILQRSNFSFIKVLMSHSDKFTQSPGGHPQGNGGPTSSNTKGTSGSSSMKFLSVGS 681
Query: 608 RFKQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGY 667
+F L L++T+S T PHY+RC+KPN P F +V+ QLRCGGV+E++RI CAG+
Sbjct: 682 QFSTSLATLMKTISTTTPHYVRCIKPNPEKLPQTFNKQDVIHQLRCGGVMESVRICCAGF 741
Query: 668 PTRKMFHEFLSRFRILAPKVFDGSC-------------DEVTACKRLLQKVNLKG--YQI 712
PTR++ EF R++IL K + D + LL + L Y+I
Sbjct: 742 PTRRLLSEFYQRYKILYVKDINTGSGGGKKGSNNNKIKDPKILVQNLLTGIELSDDKYKI 801
Query: 713 GKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLRCAAIQIQTLCRGQ 772
G TKVFLRAGQ+A L+ R + L +SA +IQ + + Y KR+ LR A++ IQT R
Sbjct: 802 GLTKVFLRAGQLASLEDMRLEQLDRSATVIQKRWKGYLYRKRYKQLRDASLIIQTKLRSV 861
Query: 773 NGRYQYERMRREAASVKIQKYSRMCLARKDYHKLRSSAISIQTGLRGMAAHNDLRLMKQT 832
+ + Q ++R +++ IQK R R Y K+R +++ +QT +R + +
Sbjct: 862 HAKQQLSALQRTHSAILIQKVWRAHRDRVQYQKIRDASLQLQTVMRRHLFSEQVHRERCE 921
Query: 833 KAAIVIQSQYRQYLGRYRYLQMKKAAIVVQCAWRGKVARGELRKLKMAAKETGALQAAKS 892
AAI++Q++ RQ L + + + I++Q WR K+A+ +L+ A+ +Q K+
Sbjct: 922 NAAIILQTKIRQILSKREVDKKLRGIILIQARWRMKLAKRVYIQLRAEARSLRTVQEQKN 981
Query: 893 KLEKEVEELTWRLQLEKRMRADLEEAKTQ----------ENAKLKSALQEMQQQFEE 939
KL++++EEL WRL E + + LE+ K + N L+ L E+Q +++E
Sbjct: 982 KLQEKLEELQWRLTSEAKRKQQLEDQKVKSDTTISELSSNNDHLELQLSEIQLKYQE 1038
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Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 | Back alignment and function description |
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| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
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| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q875Q8|MYO2_LACK1 Myosin-2 OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651) GN=MYO2 PE=3 SV=1 | Back alignment and function description |
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| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function description |
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| >sp|Q875X3|MYO2A_NAUCC Myosin-2A OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=MYO2A PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1507 | ||||||
| 224070005 | 1513 | predicted protein [Populus trichocarpa] | 0.989 | 0.985 | 0.762 | 0.0 | |
| 224100009 | 1509 | predicted protein [Populus trichocarpa] | 0.980 | 0.978 | 0.774 | 0.0 | |
| 297744256 | 1540 | unnamed protein product [Vitis vinifera] | 0.988 | 0.966 | 0.763 | 0.0 | |
| 225437918 | 1518 | PREDICTED: myosin-H heavy chain [Vitis v | 0.987 | 0.980 | 0.763 | 0.0 | |
| 225433339 | 1513 | PREDICTED: myosin-Va-like [Vitis vinifer | 0.986 | 0.982 | 0.772 | 0.0 | |
| 356545924 | 1549 | PREDICTED: myosin-J heavy chain-like [Gl | 0.988 | 0.961 | 0.752 | 0.0 | |
| 356536864 | 1611 | PREDICTED: myosin-J heavy chain-like [Gl | 0.988 | 0.924 | 0.756 | 0.0 | |
| 116047943 | 1512 | myosin XI-2 [Nicotiana benthamiana] | 0.984 | 0.981 | 0.747 | 0.0 | |
| 147787358 | 1477 | hypothetical protein VITISV_040993 [Viti | 0.958 | 0.978 | 0.745 | 0.0 | |
| 255554304 | 1487 | myosin XI, putative [Ricinus communis] g | 0.979 | 0.992 | 0.752 | 0.0 |
| >gi|224070005|ref|XP_002303100.1| predicted protein [Populus trichocarpa] gi|222844826|gb|EEE82373.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 2450 bits (6349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1166/1529 (76%), Positives = 1327/1529 (86%), Gaps = 38/1529 (2%)
Query: 1 MAAPVGLVVGSIVWTEDPEEAWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFP 60
MA+ LVVGS+VW EDP+EAWIDGEV E+N EDIK+ CTSGKTV KAS YPKD E P
Sbjct: 1 MASAASLVVGSLVWLEDPDEAWIDGEVVEINKEDIKVLCTSGKTVTVKASKTYPKDAEAP 60
Query: 61 QCGVDDMTKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQY 120
CGVDDMTKLAYLHEPGVLQNLR RYD+NEIYTY GNILIAVNPF RLPHLY++HMM QY
Sbjct: 61 PCGVDDMTKLAYLHEPGVLQNLRSRYDMNEIYTYVGNILIAVNPFTRLPHLYNSHMMAQY 120
Query: 121 KGASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRT 180
KGAS GELSPHPFA+AD++YRLM+NEG+SQSILVSGESGAGKTESTK+LM+YLAYMGGR
Sbjct: 121 KGASFGELSPHPFAVADASYRLMMNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRA 180
Query: 181 ATEKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLE 240
ATE ++VEQQVLESNPVLEAFGNAKT+RNNNSSRFGKFVE+QFD+ GRISGAAIRTYLLE
Sbjct: 181 ATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQGGRISGAAIRTYLLE 240
Query: 241 RSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYV 300
RSRVCQ+SDPERNYHCFYMLCA P ED++KYKLGNPR FHYLNQSN YELD VD+SKEY+
Sbjct: 241 RSRVCQLSDPERNYHCFYMLCAAPPEDVQKYKLGNPRTFHYLNQSNCYELDVVDDSKEYI 300
Query: 301 KTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAEL 360
TR+AME+VGI+++EQDAIFRVVAA+LHLGN+EFAKG+E DSS PKDEKS HL+T AEL
Sbjct: 301 ATRRAMEIVGISAEEQDAIFRVVAAVLHLGNIEFAKGKEMDSSVPKDEKSWFHLRTVAEL 360
Query: 361 FMCDEKSLEDSMCKRVIMTRDESITKWLDPAAAALNRDALAKIVYSRLFDWLVNKINNTI 420
MCD K+LEDS+CKRVI+TRDE+ITKWLDP +AA++RDALAK+VYSRLFDWLV+KIN++I
Sbjct: 361 LMCDSKALEDSLCKRVIVTRDETITKWLDPESAAVSRDALAKVVYSRLFDWLVDKINSSI 420
Query: 421 GQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEID 480
GQDP+SK LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYT+EEID
Sbjct: 421 GQDPHSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEID 480
Query: 481 WSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPKL 540
WSYIEF+DNQD+LDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFK+HKRF+KPKL
Sbjct: 481 WSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFAKPKL 540
Query: 541 SLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPLTEESSKSS 600
+ +DFTICHYAGDVTYQTELFLDKNKDYVV EHQA++ AS C FVSGLFPPL EESSK S
Sbjct: 541 ARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALMGASKCSFVSGLFPPLAEESSKQS 600
Query: 601 KFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAI 660
KFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNN+LKP+IFEN N LQQLRCGGV+EAI
Sbjct: 601 KFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNALQQLRCGGVMEAI 660
Query: 661 RISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNLKGYQIGKTKVFLR 720
RISCAG+PTRK F EF+ RF +LAP+V DGS DEVTACKRLL+KV L GYQIGKTKVFLR
Sbjct: 661 RISCAGFPTRKTFDEFVDRFGLLAPEVLDGSSDEVTACKRLLEKVGLTGYQIGKTKVFLR 720
Query: 721 AGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLRCAAIQIQTLCRGQNGRYQYER 780
AGQMAELD+RR++VLG+SA IIQ KVRSY + + F LR +AIQIQ+ CRGQ R+ YE
Sbjct: 721 AGQMAELDARRSEVLGRSASIIQRKVRSYLSRRSFITLRRSAIQIQSACRGQIARHVYEN 780
Query: 781 MRREAASVKIQKYSRMCLARKDYHKLRSSAISIQTGLRGMAAHNDLRLMKQTKAAIVIQS 840
MRREAAS++IQ+ RM +ARK Y L SAISIQTG+RGMAA +DLR +QT+AAI+IQS
Sbjct: 781 MRREAASLRIQRDLRMYIARKAYKDLCYSAISIQTGMRGMAARDDLRFRRQTRAAIMIQS 840
Query: 841 QYRQYLGRYRYLQMKKAAIVVQCAWRGKVARGELRKLKMAAKETGALQAAKSKLEKEVEE 900
Q R+YL R Y ++KKAAI QCAWRG+VAR ELR LKMAA+ETGALQAAK+KLEK+VEE
Sbjct: 841 QCRKYLARLHYKKLKKAAITTQCAWRGRVARKELRNLKMAARETGALQAAKNKLEKQVEE 900
Query: 901 LTWRLQLEKRMRADLEEAKTQENAKLKSALQEMQQQFEETKTLLIKEREAAKKTTEALLI 960
LTWRLQLEKRMRAD+EEAKTQENAKL+SALQEMQ QF+ETK +L+KEREAA K TE
Sbjct: 901 LTWRLQLEKRMRADVEEAKTQENAKLQSALQEMQLQFKETKEMLVKEREAAIKVTE---- 956
Query: 961 MEREAAEKEAVQVPVIREVPVIDHVMVNKLTAENEELKALVSSLEKKIDETERKFEETNK 1020
+VPVI+EVPV+DHV + KLT ENE+LKALV+SLEKKIDETE+KFEET++
Sbjct: 957 -----------KVPVIQEVPVVDHVALEKLTIENEKLKALVTSLEKKIDETEKKFEETSR 1005
Query: 1021 LSEERLKEALEAESKIIELKTCMQRLEEKLSDIETEDQILRHQALFNSSSRKMSEQLSM- 1079
+SEERLK+ALEAESKI+ELKT M RLEEK SDIETE+Q+LR Q L + ++K+SE+ +
Sbjct: 1006 ISEERLKQALEAESKIVELKTAMHRLEEKFSDIETENQVLRQQGLLQTPAKKLSERPPIP 1065
Query: 1080 ---------------KTPEPQSATAAKSFGTEADSQLRKSQIERQHENLDALLKCVSQDL 1124
K EPQSAT K++GTE+DS+ R+S IERQHEN+DAL+ CV+ ++
Sbjct: 1066 PTQSLENGHHLNDENKANEPQSATPVKTYGTESDSKFRRSHIERQHENIDALISCVTNNI 1125
Query: 1125 GFSQEKPVAAFTIYKCLLHWGSFEAEKTSVFDRLIQLIGSAIENPDSNDHLAYWLSNAST 1184
GFS KPVAA TIY+CLLHW SFEAE+TSVFDRLIQ+IGSAIEN ++N+H+AYWLSN ST
Sbjct: 1126 GFSHGKPVAALTIYRCLLHWKSFEAERTSVFDRLIQMIGSAIENEENNEHMAYWLSNTST 1185
Query: 1185 LLFLLQCSLKASGAAGSSQRKPPQPTSFFGRMTQGFR------SSSASLSVDVVRQVEAK 1238
LLFLLQ S+KA+GA+ + QRKPP TS FGRMT GFR + +A+ ++ VVRQVEAK
Sbjct: 1186 LLFLLQRSIKAAGASATPQRKPPSATSLFGRMTMGFRSSPSSSNLAAAAALAVVRQVEAK 1245
Query: 1239 YPALLFKQQLTAYVETFYGIIRDNLKKDLSPHLSSCIQAPRMSKGNAIKSPASSRGSSPK 1298
YPALLFKQQL AYVE YGIIRDNLKK+L+ LS CIQAPR SKG+ ++S S SP
Sbjct: 1246 YPALLFKQQLAAYVEKIYGIIRDNLKKELASLLSLCIQAPRTSKGSVLRSGRSFGKDSPL 1305
Query: 1299 SSPWNSIIDIVNGLLRSLKENFVPRVLIQRIFTQIFSYINVQLFNSLLLRRECCTFSNGE 1358
S W SI+D +N LL +LK+NFVP VLIQ+I+TQ FSYINVQLFNSLLLRRECCTFSNGE
Sbjct: 1306 SH-WQSIVDSLNTLLSTLKQNFVPPVLIQKIYTQTFSYINVQLFNSLLLRRECCTFSNGE 1364
Query: 1359 YVKQGLAELELWCGEAKEEYAGSSWDELKHTRQAVGFLVIHQKTRISYDEITNDLCPVLS 1418
YVK GLAELELW +AKEEYAGSSWDELKH RQAVGFLVIHQK RISYDEITNDLCP+LS
Sbjct: 1365 YVKSGLAELELWSAQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILS 1424
Query: 1419 VQQLYRVCTLYWDDDYNTQSVSPDVISSMKILMTDDSNEDDSNSFLLDDNSSIPFSVDDL 1478
VQQLYR+CTLYWDD+YNT+SVSP VISSM++LMT+DSN SNSFLLDDNS IPFSVDDL
Sbjct: 1425 VQQLYRICTLYWDDNYNTRSVSPGVISSMRVLMTEDSNSAVSNSFLLDDNSGIPFSVDDL 1484
Query: 1479 SSTFQEKDFSDVKPAAELLENPAFQFLEE 1507
S++ QEKDF DV+PA ELLENPAFQFL E
Sbjct: 1485 SNSLQEKDFMDVQPAEELLENPAFQFLHE 1513
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224100009|ref|XP_002311708.1| predicted protein [Populus trichocarpa] gi|222851528|gb|EEE89075.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297744256|emb|CBI37226.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225437918|ref|XP_002268099.1| PREDICTED: myosin-H heavy chain [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225433339|ref|XP_002285579.1| PREDICTED: myosin-Va-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356545924|ref|XP_003541383.1| PREDICTED: myosin-J heavy chain-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356536864|ref|XP_003536953.1| PREDICTED: myosin-J heavy chain-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|116047943|gb|ABJ53197.1| myosin XI-2 [Nicotiana benthamiana] | Back alignment and taxonomy information |
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| >gi|147787358|emb|CAN64632.1| hypothetical protein VITISV_040993 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255554304|ref|XP_002518192.1| myosin XI, putative [Ricinus communis] gi|223542788|gb|EEF44325.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1507 | ||||||
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.986 | 0.991 | 0.661 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.981 | 0.975 | 0.656 | 0.0 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.986 | 0.972 | 0.600 | 0.0 | |
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.988 | 0.979 | 0.575 | 0.0 | |
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.840 | 0.819 | 0.625 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.896 | 0.878 | 0.578 | 0.0 | |
| TAIR|locus:2039007 | 1493 | XIG "myosin-like protein XIG" | 0.832 | 0.840 | 0.621 | 0.0 | |
| TAIR|locus:2125929 | 1522 | XI-I [Arabidopsis thaliana (ta | 0.978 | 0.969 | 0.513 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.714 | 0.622 | 0.677 | 0.0 | |
| TAIR|locus:2046570 | 1770 | XID "myosin XI D" [Arabidopsis | 0.703 | 0.598 | 0.666 | 0.0 |
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 5139 (1814.1 bits), Expect = 0., P = 0.
Identities = 1004/1517 (66%), Positives = 1195/1517 (78%)
Query: 1 MAAPVGLVVGSIVWTEDPEEAWIDGEVEEVNDEDIKIACTSGKTVVAKASNVYPKDPEFP 60
M A VGS VW EDP+EAW+DGEV E+N + IK+ C SGK VV K SN+YPKD E P
Sbjct: 1 MVATFNPAVGSHVWVEDPDEAWLDGEVVEINGDQIKVLCASGKQVVVKDSNIYPKDVEAP 60
Query: 61 QCGVDDMTKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQY 120
GV+DMT+LAYLHEPGVLQNL+ RYD+NEIYTYTG+ILIAVNPFRRLPHLY +HMM QY
Sbjct: 61 ASGVEDMTRLAYLHEPGVLQNLQSRYDINEIYTYTGSILIAVNPFRRLPHLYSSHMMTQY 120
Query: 121 KGASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGR- 179
KGASLGELSPHPFA+AD+AYR M+NEG+SQSILVSGESGAGKTESTK+LM+YLA+MGGR
Sbjct: 121 KGASLGELSPHPFAVADAAYRQMVNEGVSQSILVSGESGAGKTESTKLLMRYLAFMGGRG 180
Query: 180 TATEKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLL 239
ATE ++VEQ+VLESNPVLEAFGNAKT++NNNSSRFGKFVE+QFD+ GRISGAAIRTYLL
Sbjct: 181 AATEGRTVEQKVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDQSGRISGAAIRTYLL 240
Query: 240 ERSRVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEY 299
ERSRVCQVSDPERNYHCFYMLCA P ED +K+KLG+P+++HYLNQS +LD +++++EY
Sbjct: 241 ERSRVCQVSDPERNYHCFYMLCAAPEEDAKKFKLGDPKIYHYLNQSKCIQLDAMNDAEEY 300
Query: 300 VKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAE 359
T+KAM+VVGI+S+EQDAIFRVVA+ILHLGN+EFAKG E DSS P+DEKS HLKTAAE
Sbjct: 301 HATKKAMDVVGISSEEQDAIFRVVASILHLGNIEFAKGTEIDSSIPRDEKSWFHLKTAAE 360
Query: 360 LFMCDEKSLEDSMCKRVIMTRDESITKWXXXXXXXXXXXXXXKIVYSRLFDWLVNKINNT 419
L MC+EKSLEDS+CKR++ TRDE+ITK K++YSRLFDWLV KIN +
Sbjct: 361 LLMCNEKSLEDSLCKRIMATRDETITKTLDPEAALLSRDALAKVMYSRLFDWLVEKINTS 420
Query: 420 IGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEI 479
IGQDP+SK LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEY +EEI
Sbjct: 421 IGQDPDSKYLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEI 480
Query: 480 DWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPK 539
+WSYIEF+DNQD+LDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQT+K+HKRF+KPK
Sbjct: 481 NWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTYKNHKRFTKPK 540
Query: 540 LSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPLTEEXXXX 599
L+ +DFTICHYAGDVTYQTELFLDKNKDYV+ EHQA+L+AS C FV+ LFPP++++
Sbjct: 541 LARSDFTICHYAGDVTYQTELFLDKNKDYVIAEHQALLNASTCSFVANLFPPVSDDSKQS 600
Query: 600 XXXXXXXXXXXQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEA 659
QQL +LLE L+ TEPHYIRC+KPNN+LKP IFEN NVLQQLRCGGV+EA
Sbjct: 601 KFSSIGTRFK-QQLVSLLEILNTTEPHYIRCIKPNNLLKPGIFENQNVLQQLRCGGVMEA 659
Query: 660 IRISCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNLKGYQIGKTKVFL 719
IRISCAGYPTRK F EFL+RF I+AP+V D + +E ACK+LL K L+GYQIGK+KVFL
Sbjct: 660 IRISCAGYPTRKHFDEFLNRFGIIAPQVLDKNSNEPAACKKLLDKAGLEGYQIGKSKVFL 719
Query: 720 RAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLRCAAIQIQTLCRGQNGRYQYE 779
RAGQMA+LD+RRT++LG+SA IIQ KVRSY A K F LR +A QIQ +CRG R YE
Sbjct: 720 RAGQMADLDTRRTEILGRSASIIQRKVRSYLAQKTFIQLRISATQIQAVCRGYLARSIYE 779
Query: 780 RMRREAASVKIQKYSRMCLARKDYHKLRSSAISIQTGLRGMAAHNDLRLMKQTKAAIVIX 839
MRREAA++KIQ+ R LARK Y +L S+ I IQ G+RGM + +L L +QTKAA +I
Sbjct: 780 GMRREAAALKIQRDLRKFLARKAYTELFSATILIQAGMRGMVSRKELCLRRQTKAATIIQ 839
Query: 840 XXXXXXXXXXXXXXMKKAAIVVQCAWRGKVARGELRKLKMAAKETGALQAAKSKLEKEVE 899
+KKAAI QCAWRGKVAR EL+ LKMAA+ETGALQ AK+KLEK+VE
Sbjct: 840 TRCRVYLARLHYRKLKKAAITTQCAWRGKVARKELKNLKMAARETGALQEAKNKLEKQVE 899
Query: 900 ELTWRLQLEKRMRADLEEAKTQENAKLKSALQEMQQQFEETKTLLIKEREAAKKTTEALL 959
ELTWRLQLEKRMR DLEEAK QENAK +S+L+E+Q +F+ET+ LLIKEREAAK +E L
Sbjct: 900 ELTWRLQLEKRMRTDLEEAKKQENAKYESSLEEIQNKFKETEALLIKEREAAKTVSEVL- 958
Query: 960 IMEREAAEKEAVQVPVIREVPVIDHVMVNKLTAENEELKALVSSLEKKIDETERKFEETN 1019
P+I+EVPV+D ++ KLT ENE+LK +VSSLE KIDET ++ ET
Sbjct: 959 --------------PIIKEVPVVDQELMEKLTNENEKLKGMVSSLEIKIDETAKELHETA 1004
Query: 1020 KLSEERLKEALEAESKIIELKTCMQRLEEKLSDIETEDQILRHQALFNSSSRKMSEQ--- 1076
++S++RLK+AL AESK+ +LKT MQRLEEK+SD+ETE QI+ Q + N+ + ++
Sbjct: 1005 RISQDRLKQALAAESKVAKLKTAMQRLEEKISDMETEKQIMLQQTILNTPVKSVAGHPPT 1064
Query: 1077 LSMKTPEPQSATAAKS-FG-TEADSQLRKSQIERQHENLDALLKCVSQDLGFSQEKPVAA 1134
++K E T ++ F E + KS ERQ EN+D L+ CV +++GFS KP+AA
Sbjct: 1065 ATIKNLENGHRTNLENQFNEVEVNGNAGKSAAERQLENVDTLIDCVKENIGFSNGKPIAA 1124
Query: 1135 FTIYKCLLHWGSFEAEKTSVFDRLIQLIGSAIENPDSNDHLAYWLSNASTLLFLLQCSLK 1194
FTIYKCLLHW FE+EKTS FDRLI++IGSAIEN D N HLAYWL+N S LLFLLQ SLK
Sbjct: 1125 FTIYKCLLHWKCFESEKTSAFDRLIEMIGSAIENEDDNGHLAYWLTNTSALLFLLQKSLK 1184
Query: 1195 ASGAAGSSQRKPPQPTSFFGRMTQGFRSS------SASLSVDVVRQVEAKYPALLFKQQL 1248
+GA ++ +KPP TS FGRM FRSS + + ++ V+R VEAKYPALLFKQQL
Sbjct: 1185 PAGAGATASKKPPITTSLFGRMALSFRSSPNLAAAAEAAALAVIRPVEAKYPALLFKQQL 1244
Query: 1249 TAYVETFYGIIRDNLKKDLSPHLSSCIQAPRMSKGNAIKXXXXXXXXXXXXXXXXXIIDI 1308
AYVE +G+IRDNLKK+LS +S CIQAPR+SKG I+ IID
Sbjct: 1245 AAYVEKIFGMIRDNLKKELSALISMCIQAPRISKGG-IQRSARSLGKDSPAIHWQSIIDG 1303
Query: 1309 VNGLLRSLKENFVPRVLIQRIFTQIFSYINVQLFNSLLLRRECCTFSNGEYVKQGLAELE 1368
+N LL LK+N+VP VLIQ+I TQ FS++NVQLFNSLLLR+ECCTFSNGE+VK GLAELE
Sbjct: 1304 LNSLLAILKDNYVPLVLIQKIHTQTFSFVNVQLFNSLLLRKECCTFSNGEFVKSGLAELE 1363
Query: 1369 LWCGEAKEEYAGSSWDELKHTRQAVGFLVIHQKTRISYDEITNDLCPVLSVQQLYRVCTL 1428
LWCG+ E YAG SWDELKH RQAVGFLVIHQK R+SYD+I +DLCP+LSVQQLYR+CTL
Sbjct: 1364 LWCGQVNE-YAGPSWDELKHIRQAVGFLVIHQKYRVSYDDIVHDLCPILSVQQLYRICTL 1422
Query: 1429 YWDDDYNTQSVSPDVISSMKILMTXXXXXXXXXXXXXXXXXXIPFSVDDLSSTFQEKDFS 1488
YWDD YNT+SVS +VISSM+ LMT IPFS+D++S++ EKDF+
Sbjct: 1423 YWDDCYNTRSVSQEVISSMRALMTEESNDADSNSFLLDDNSSIPFSIDEISNSMHEKDFA 1482
Query: 1489 DVKPAAELLENPAFQFL 1505
VKPA ELLENP F FL
Sbjct: 1483 SVKPAKELLENPEFVFL 1499
|
|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039007 XIG "myosin-like protein XIG" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125929 XI-I [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2046570 XID "myosin XI D" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| O94477 | MYO52_SCHPO | No assigned EC number | 0.3094 | 0.8672 | 0.8621 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1507 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 0.0 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 0.0 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-175 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-163 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-160 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 6e-71 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 8e-42 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-12 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 6e-10 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 4e-09 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-07 | |
| pfam02736 | 42 | pfam02736, Myosin_N, Myosin N-terminal SH3-like do | 7e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 8e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-05 | |
| TIGR00606 | 1311 | TIGR00606, rad50, rad50 | 2e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-05 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 3e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 7e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 9e-05 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 1e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-04 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 2e-04 | |
| COG2433 | 652 | COG2433, COG2433, Uncharacterized conserved protei | 2e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 3e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 3e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 4e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 4e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 4e-04 | |
| PRK12704 | 520 | PRK12704, PRK12704, phosphodiesterase; Provisional | 4e-04 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 6e-04 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.001 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 0.001 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 0.001 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 0.002 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.002 | |
| pfam00038 | 312 | pfam00038, Filament, Intermediate filament protein | 0.002 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.003 | |
| pfam07111 | 739 | pfam07111, HCR, Alpha helical coiled-coil rod prot | 0.003 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.004 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1403 bits (3634), Expect = 0.0
Identities = 560/673 (83%), Positives = 620/673 (92%)
Query: 63 GVDDMTKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKG 122
GVDDMTKL+YLHEPGVLQNL+ RY++NEIYTYTGNILIAVNPF+RLPHLYD HMMEQYKG
Sbjct: 2 GVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYKG 61
Query: 123 ASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTAT 182
A+LGELSPH FAIAD+AYR MINEG SQSILVSGESGAGKTE+TKMLM+YLAYMGGR
Sbjct: 62 AALGELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAGV 121
Query: 183 EKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERS 242
E ++VEQQVLESNPVLEAFGNAKT+RNNNSSRFGKFVE+QFD+ GRISGAAIRTYLLERS
Sbjct: 122 EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLERS 181
Query: 243 RVCQVSDPERNYHCFYMLCAGPAEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKT 302
RVCQ+SDPERNYHCFY LCA P ED++KYKLG+P+ FHYLNQSN +ELDGVD+++EY+ T
Sbjct: 182 RVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLAT 241
Query: 303 RKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFM 362
R+AM+VVGI+ +EQDAIFRVVAAILHLGN+EFAKGEE DSS KDEKS HLKTAAEL M
Sbjct: 242 RRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELLM 301
Query: 363 CDEKSLEDSMCKRVIMTRDESITKWLDPAAAALNRDALAKIVYSRLFDWLVNKINNTIGQ 422
CDEK+LED++CKRV++T +E ITK LDP +A L+RDALAK +YSRLFDWLVNKIN++IGQ
Sbjct: 302 CDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIGQ 361
Query: 423 DPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWS 482
DP+SK LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYT+EEIDWS
Sbjct: 362 DPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWS 421
Query: 483 YIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRFSKPKLSL 542
YIEF+DNQDVLDLIEKKPGGIIALLDEACMFP+STHETFAQKLYQTFKDHKRF KPKLS
Sbjct: 422 YIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLSR 481
Query: 543 TDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPLTEESSKSSKF 602
T FTI HYAGDVTYQT+ FLDKNKDYVV EHQA+L+AS C FV+GLFPPL EE+SKSSKF
Sbjct: 482 TAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSKF 541
Query: 603 SSIGSRFKQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRI 662
SSIGSRFKQQLQ+L+ETLS TEPHYIRC+KPNNVLKP IFEN NVLQQLRCGGVLEAIRI
Sbjct: 542 SSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIRI 601
Query: 663 SCAGYPTRKMFHEFLSRFRILAPKVFDGSCDEVTACKRLLQKVNLKGYQIGKTKVFLRAG 722
SCAGYPTR+ F EFL RF ILAP+V GS D+ ACK++L K+ LKGYQIGKTKVFLRAG
Sbjct: 602 SCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLRAG 661
Query: 723 QMAELDSRRTQVL 735
QMAELD+RRT+VL
Sbjct: 662 QMAELDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|111612 pfam02736, Myosin_N, Myosin N-terminal SH3-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|129694 TIGR00606, rad50, rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|225288 COG2433, COG2433, Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|200948 pfam00038, Filament, Intermediate filament protein | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|148617 pfam07111, HCR, Alpha helical coiled-coil rod protein (HCR) | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1507 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 99.97 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.94 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.27 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.66 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.39 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.36 | |
| PF02736 | 42 | Myosin_N: Myosin N-terminal SH3-like domain; Inter | 98.23 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.2 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 97.96 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.94 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.64 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.34 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.3 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.27 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 97.02 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 97.02 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.01 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.95 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.93 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.92 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.89 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 96.81 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.81 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.66 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.65 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.64 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.63 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 96.61 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 96.49 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.45 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.38 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.36 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 96.34 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 96.33 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.32 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.22 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 96.2 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.17 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 96.14 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 96.14 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.12 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 96.02 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 95.98 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 95.88 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 95.85 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.85 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 95.71 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 95.71 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 95.7 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 95.69 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 95.46 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 95.33 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 95.32 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.28 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 95.21 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.17 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 95.17 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.15 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.1 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 95.09 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 95.01 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 94.93 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 94.88 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 94.75 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.54 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 94.53 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 94.52 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 94.52 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 94.52 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 94.49 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 94.46 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.45 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 94.44 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 94.35 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 94.34 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 94.12 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 94.08 | |
| PTZ00014 | 821 | myosin-A; Provisional | 94.04 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 94.02 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 93.95 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 93.77 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 93.77 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 93.75 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 93.69 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 93.64 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 93.61 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 93.54 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.53 | |
| PRK07196 | 434 | fliI flagellum-specific ATP synthase; Validated | 93.5 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.31 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 93.31 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 93.18 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 93.0 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 92.88 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 92.86 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 92.78 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 92.6 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 92.56 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 92.54 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.5 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 92.35 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 92.29 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 92.26 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 92.17 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 92.02 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 92.01 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 91.87 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 91.87 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 91.86 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 91.85 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 91.76 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 91.69 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 91.65 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 91.58 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 91.51 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 91.47 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 91.39 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 91.33 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 91.2 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 91.13 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 91.07 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 91.05 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 91.04 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 90.87 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 90.85 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 90.81 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 90.77 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 90.76 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 90.73 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 90.69 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 90.66 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 90.65 | |
| PRK06696 | 223 | uridine kinase; Validated | 90.64 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 90.56 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.54 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 90.48 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 90.48 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 90.39 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 90.38 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 90.37 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 90.28 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 90.26 | |
| PF09728 | 309 | Taxilin: Myosin-like coiled-coil protein; InterPro | 90.25 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 90.25 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 90.16 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 90.01 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 89.95 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 89.85 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 89.82 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 89.69 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 89.66 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 89.62 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 89.6 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 89.55 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 89.52 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 89.48 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 89.46 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 89.46 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 89.44 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 89.42 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 89.27 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 89.27 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 89.25 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 89.22 | |
| PRK08972 | 444 | fliI flagellum-specific ATP synthase; Validated | 89.18 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 89.15 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 89.07 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 89.04 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 89.04 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 88.93 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 88.87 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 88.79 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 88.78 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 88.77 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 88.7 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 88.68 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 88.51 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 88.46 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 88.4 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 88.29 | |
| PF05729 | 166 | NACHT: NACHT domain | 88.07 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 88.06 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 88.02 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 87.98 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 87.92 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 87.89 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 87.77 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 87.69 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 87.63 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 87.56 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 87.55 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 87.53 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 87.51 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 87.46 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 87.4 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 87.36 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 87.29 | |
| PRK08472 | 434 | fliI flagellum-specific ATP synthase; Validated | 87.27 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 87.25 | |
| PRK06315 | 442 | type III secretion system ATPase; Provisional | 87.21 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 87.15 | |
| PRK09099 | 441 | type III secretion system ATPase; Provisional | 87.13 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 87.12 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 87.1 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 87.08 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 87.04 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 87.01 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 86.97 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 86.87 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 86.78 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 86.71 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 86.57 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 86.53 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 86.49 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 86.49 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 86.48 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 86.47 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 86.47 | |
| COG3074 | 79 | Uncharacterized protein conserved in bacteria [Fun | 86.37 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 86.35 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 86.34 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 86.18 | |
| COG4477 | 570 | EzrA Negative regulator of septation ring formatio | 86.14 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 86.13 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 86.1 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 86.05 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 86.01 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 85.9 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 85.89 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 85.88 | |
| PRK06217 | 183 | hypothetical protein; Validated | 85.87 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 85.84 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 85.76 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 85.76 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 85.76 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 85.7 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 85.67 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 85.59 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 85.58 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 85.57 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 85.45 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 85.44 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 85.42 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 85.34 | |
| PRK12377 | 248 | putative replication protein; Provisional | 85.17 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 85.14 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 85.13 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 85.11 | |
| PF09738 | 302 | DUF2051: Double stranded RNA binding protein (DUF2 | 85.06 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 85.01 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 84.99 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 84.82 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 84.77 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 84.75 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 84.74 | |
| KOG4807 | 593 | consensus F-actin binding protein, regulates actin | 84.73 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 84.73 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 84.69 | |
| smart00333 | 57 | TUDOR Tudor domain. Domain of unknown function pre | 84.67 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 84.67 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 84.66 | |
| PRK13764 | 602 | ATPase; Provisional | 84.59 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 84.58 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 84.56 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 84.54 | |
| PRK07721 | 438 | fliI flagellum-specific ATP synthase; Validated | 84.49 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 84.37 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 84.35 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 84.19 | |
| PRK05688 | 451 | fliI flagellum-specific ATP synthase; Validated | 84.18 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 84.06 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 84.04 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 83.97 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 83.9 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 83.9 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 83.83 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 83.81 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 83.76 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 83.75 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 83.74 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 83.63 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 83.62 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 83.59 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 83.57 | |
| PRK15422 | 79 | septal ring assembly protein ZapB; Provisional | 83.43 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 83.39 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 83.38 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 83.37 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 83.35 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 83.34 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 83.31 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 83.28 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 83.26 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 83.2 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 83.18 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 83.17 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 83.09 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 83.04 | |
| PRK06002 | 450 | fliI flagellum-specific ATP synthase; Validated | 83.02 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 82.99 | |
| COG0802 | 149 | Predicted ATPase or kinase [General function predi | 82.98 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 82.89 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 82.69 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 82.68 | |
| PTZ00121 | 2084 | MAEBL; Provisional | 82.58 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 82.46 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 82.44 | |
| PF10212 | 518 | TTKRSYEDQ: Predicted coiled-coil domain-containing | 82.42 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 82.33 | |
| PRK10869 | 553 | recombination and repair protein; Provisional | 82.33 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 82.31 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 82.29 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 82.16 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 82.16 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 82.14 | |
| PRK07667 | 193 | uridine kinase; Provisional | 82.13 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 81.99 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 81.94 | |
| COG2204 | 464 | AtoC Response regulator containing CheY-like recei | 81.93 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 81.9 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 81.89 | |
| TIGR02546 | 422 | III_secr_ATP type III secretion apparatus H+-trans | 81.89 | |
| COG4619 | 223 | ABC-type uncharacterized transport system, ATPase | 81.79 | |
| PRK10646 | 153 | ADP-binding protein; Provisional | 81.76 | |
| PRK08727 | 233 | hypothetical protein; Validated | 81.71 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 81.69 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 81.67 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 81.65 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 81.42 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 81.41 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 81.36 | |
| KOG0056 | 790 | consensus Heavy metal exporter HMT1, ABC superfami | 81.34 | |
| PF09304 | 107 | Cortex-I_coil: Cortexillin I, coiled coil; InterPr | 81.3 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 81.3 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 81.29 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 81.23 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 81.16 | |
| PRK06936 | 439 | type III secretion system ATPase; Provisional | 81.1 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 81.06 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 80.81 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 80.81 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 80.69 | |
| TIGR03496 | 411 | FliI_clade1 flagellar protein export ATPase FliI. | 80.6 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 80.55 | |
| PRK09112 | 351 | DNA polymerase III subunit delta'; Validated | 80.53 | |
| TIGR01026 | 440 | fliI_yscN ATPase FliI/YscN family. This family of | 80.42 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 80.33 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 80.32 | |
| PRK14528 | 186 | adenylate kinase; Provisional | 80.2 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 80.2 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 80.19 | |
| TIGR02788 | 308 | VirB11 P-type DNA transfer ATPase VirB11. The VirB | 80.18 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 80.17 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 80.15 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 80.09 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 80.08 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 80.06 | |
| PRK00698 | 205 | tmk thymidylate kinase; Validated | 80.06 | |
| PRK05537 | 568 | bifunctional sulfate adenylyltransferase subunit 1 | 80.01 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 80.01 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-235 Score=2174.91 Aligned_cols=1352 Identities=35% Similarity=0.529 Sum_probs=1046.6
Q ss_pred cccccCCEEEEeCCCCCeEeEEEEEEc--CCeEEEE--eCCCcEEEEecCCCCCCCCC-CCCCCCcccccCcCCChHHHH
Q 000442 5 VGLVVGSIVWTEDPEEAWIDGEVEEVN--DEDIKIA--CTSGKTVVAKASNVYPKDPE-FPQCGVDDMTKLAYLHEPGVL 79 (1507)
Q Consensus 5 ~~~~~g~~vw~~~~~~~~~~~~v~~~~--~~~~~v~--~~~g~~~~~~~~~~~~~~~~-~~~~~~~Dl~~L~~l~e~~vl 79 (1507)
..+.+|..||+|+.+.+|+.|.|.+.+ ++.++.. ..+|....++...+...... +...++||||.|+|||||+||
T Consensus 4 ~~~~~g~~~w~p~~e~~Wi~~~~~k~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~P~~~~vdDLt~LSyLNEpsVl 83 (1463)
T COG5022 4 TNAEVGSGCWIPDEEKGWIWAEIIKEAFNKGKVTEEGKKEDGESVSVKKKVLGNDRIKLPKFDGVDDLTELSYLNEPAVL 83 (1463)
T ss_pred cccccCceeeeeccccceeeeeechhhhhccccccchhhccCcccceeehhcccccccCccccCchhhhhhhccCcHHHH
Confidence 368999999999999999999999853 3333322 24554444443332211111 135789999999999999999
Q ss_pred HHHHhhhccCccccccCceEEEecCCCCCCCCCCHHHHHHhhcCCCCCCCCChhHhhHHHHHHHHhcCCceEEEEeCCCC
Q 000442 80 QNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESG 159 (1507)
Q Consensus 80 ~~L~~R~~~~~iYT~~G~~LiavNP~~~l~~ly~~~~~~~y~~~~~~~l~PHifavA~~Ay~~m~~~~~~QsIiisGeSG 159 (1507)
|||++||..++||||+|.||||||||..+| ||+.++|+.|++++..+++|||||||++||+.|...++|||||||||||
T Consensus 84 ~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISGESG 162 (1463)
T COG5022 84 HNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISGESG 162 (1463)
T ss_pred HHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHHHHHHhcCCCceEEEecCCC
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHhcCcCccccCcHHHHHHhccchhhhcccccccCCCCCCcccceEEEEEcCCCceeeeeeeeecc
Q 000442 160 AGKTESTKMLMQYLAYMGGRTATEKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLL 239 (1507)
Q Consensus 160 aGKTe~~k~~~~yla~~~~~~~~~~~~ie~~il~snpilEaFGNAkT~~N~NSSRfgk~~~l~f~~~g~i~ga~i~~yLL 239 (1507)
|||||+||+||+|||.+++.++....+||++||++||||||||||||+||||||||||||+|.||.+|.|+||+|+||||
T Consensus 163 AGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~YLL 242 (1463)
T COG5022 163 AGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIETYLL 242 (1463)
T ss_pred CCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEEECCCCceechhhhhhhh
Confidence 99999999999999999987766667899999999999999999999999999999999999999999999999999999
Q ss_pred cCcceeccCCCCCcceeeeccccC-ChhhHhhcCCCCCCccccccCCCccccCCCChHHHHHHHHhhhhhcccChhhHHH
Q 000442 240 ERSRVCQVSDPERNYHCFYMLCAG-PAEDIEKYKLGNPRMFHYLNQSNFYELDGVDESKEYVKTRKAMEVVGINSDEQDA 318 (1507)
Q Consensus 240 EksRv~~~~~~ErnfHiFYql~~~-~~~~~~~~~l~~~~~~~yl~~~~~~~~~~~dd~~~f~~~~~al~~lg~~~~~~~~ 318 (1507)
||||||+|+.+|||||||||||++ ++..++.+++..|.+|+||++|+|..++|+||+++|..|+.||+++||+.++|..
T Consensus 243 EKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~eeq~~ 322 (1463)
T COG5022 243 EKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEEQDQ 322 (1463)
T ss_pred hhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHHHHH
Confidence 999999999999999999999995 4445566667899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCeeeecCCCCCCCccCCcccHHHHHHHHHHcCCCHHHHHHhhhcceEeecCCeeeecCCHHHHHHhHH
Q 000442 319 IFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIMTRDESITKWLDPAAAALNRD 398 (1507)
Q Consensus 319 i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~l~~~l~~r~~~~~~e~~~~~l~~~~a~~~rd 398 (1507)
||++||||||||||+|..+.+ +.+...+.. .++.+|.|||||++.|.+||+.|.|.+++|.|.+|+|..||..+||
T Consensus 323 IF~iLAaILhiGNIef~~~r~-g~a~~~~~~---~~~~~c~LLgId~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~ird 398 (1463)
T COG5022 323 IFKILAAILHIGNIEFKEDRN-GAAIFSDNS---VLDKACYLLGIDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALAIRD 398 (1463)
T ss_pred HHHHHHHHHhhcceeeeeccc-chhhcCCch---HHHHHHHHhCCCHHHHHHHHHHhHhhcCceEEEecCCHHHHHHHHH
Confidence 999999999999999988654 444444433 6999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhccCCCCCCcceEEEeeccccCCCCCCchhHHHhhhhhHHHHHHHHHHHhhhhHHHhhhcC
Q 000442 399 ALAKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREE 478 (1507)
Q Consensus 399 alak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeQlciNyanEklq~~f~~~~f~~eq~~y~~Eg 478 (1507)
||||+||++||+|||++||.+|..++...+|||||||||||+|+.|||||||||||||||||+||+|||++|||||.+||
T Consensus 399 slAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~ 478 (1463)
T COG5022 399 SLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEG 478 (1463)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccChHHHHHHHhh-CCCcccccccccccCCCCChHHHHHHHHHHhc--CCCCccCCCCCCCCeEEEeecccee
Q 000442 479 IDWSYIEFIDNQDVLDLIEK-KPGGIIALLDEACMFPRSTHETFAQKLYQTFK--DHKRFSKPKLSLTDFTICHYAGDVT 555 (1507)
Q Consensus 479 i~w~~i~~~dn~~~idli~~-~~~Gil~lLdee~~~~~~~d~~~~~kl~~~~~--~~~~~~~p~~~~~~F~i~H~ag~V~ 555 (1507)
|+|++|+|.|||+||||||+ .|.|||++|||||.+|.|||++|.+||++.+. +++.|.+||+....|+|+||||+|+
T Consensus 479 IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVe 558 (1463)
T COG5022 479 IEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVE 558 (1463)
T ss_pred CcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCCceEEEeecccce
Confidence 99999999999999999998 25599999999999999999999999999886 5688999999999999999999999
Q ss_pred eeccchhhhccCCCcHHHHHHHHhcCCccccCcCCCCcccccCCCCCcchhHHHHHHHHHHHHHHcCCCCeEEEEecCCC
Q 000442 556 YQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPLTEESSKSSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNN 635 (1507)
Q Consensus 556 Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~~~~~tv~~~f~~~l~~L~~~l~~t~~hfIrCIkPN~ 635 (1507)
|+++||++||+|++++++++|+.+|+|+|+..||+.... ..++++++|+|+.||.||++||++|++|+||||||||||.
T Consensus 559 Y~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~-~~~K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkPN~ 637 (1463)
T COG5022 559 YDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEEN-IESKGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKPNE 637 (1463)
T ss_pred eeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhh-ccccCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCCCc
Confidence 999999999999999999999999999999999995433 3344688999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHhhhccchhHHHHhhhccCCcccchHHHHHHHhhhccCccC-----CCcchHHHHHHHhhhcCCC--
Q 000442 636 VLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRILAPKVFD-----GSCDEVTACKRLLQKVNLK-- 708 (1507)
Q Consensus 636 ~~~~~~fd~~~v~~QLr~~gvle~iri~~~Gyp~r~~~~~F~~ry~~L~~~~~~-----~~~d~~~~~~~il~~~~~~-- 708 (1507)
.|.|+.||+.+|++|||||||||+|||+|+|||+||+|++|+.||++|.|.... +..|.+.+|+.||....++
T Consensus 638 ~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~id~~ 717 (1463)
T COG5022 638 EKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELVIDSS 717 (1463)
T ss_pred ccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhcCChh
Confidence 999999999999999999999999999999999999999999999999997432 2246799999999987665
Q ss_pred cceeccceeecccchhhhcccccccccchhhHHHHhhhhcccccccccchhhhhHHHhhhhccccccceechhhhhhHHH
Q 000442 709 GYQIGKTKVFLRAGQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLRCAAIQIQTLCRGQNGRYQYERMRREAASV 788 (1507)
Q Consensus 709 ~~qiGkTKVFlr~~~~~~Le~~r~~~l~~aai~IQ~~~R~~l~Rk~~~~~~~aai~IQ~~~Rg~laR~~~~~lr~~~aai 788 (1507)
.||+|+||||||+|+++.||.+|...+..+++.||++|||++.|++|....+.+..+|...+|++.|++...--.-.+++
T Consensus 718 ~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1463)
T COG5022 718 KYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFI 797 (1463)
T ss_pred heeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999998776655566999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhH
Q 000442 789 KIQKYSRMCLARKDYHKLRSSAISIQ-TGLRGMAAHNDLRLMKQTKAAIVIQSQYRQYLGRYRYLQMKKAAIVVQCAWRG 867 (1507)
Q Consensus 789 ~IQ~~~R~~~~Rr~~~~lr~a~i~iQ-s~~Rg~~aRk~~~~~r~~~aA~~IQ~~~R~~~~R~~~~~~~~a~i~iQ~~~R~ 867 (1507)
.+|..||....|+.|...-..++.+| ..+|....+.........++++.+|+.||.+..+++|..+.+..+.+|+.+|.
T Consensus 798 ~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~~r~ 877 (1463)
T COG5022 798 KLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRV 877 (1463)
T ss_pred HhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHHHHH
Confidence 99999999999999999999999999 77777777776777777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000442 868 KVARGELRKLKMAAKETGALQAAKSKLEKEVEELTWRLQLEKRMRADLEEAKTQENAKLKSALQEMQQQFEETKTLLIKE 947 (1507)
Q Consensus 868 ~~aRr~~~~Lk~ea~~~~~l~~~~~~le~k~~el~~rl~~e~r~~~~le~~~~~e~~kL~~~l~ele~~lee~~~~l~~e 947 (1507)
..|++++..++.+.+++..+......++.++.++...+..... .+.+-. ....++++..+...+ +++... .+
T Consensus 878 ~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~--~~~~~k-~e~~a~lk~~l~~~d--~~~~~~---~~ 949 (1463)
T COG5022 878 ELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLI--ENLEFK-TELIARLKKLLNNID--LEEGPS---IE 949 (1463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhh--hhhHHH-HHHHHHHHHHhhccc--ccchhH---HH
Confidence 9999999999999999999999999999999888887664221 111111 122222222222210 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccccccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000442 948 REAAKKTTEALLIMEREAAEKEAVQVPVIREVPVIDHVMVNKLTAENEELKALVSSLEKKIDETERKFEETNKLSEERLK 1027 (1507)
Q Consensus 948 ~~~~~~~~e~~~~le~e~~~~~~~~~~~~~e~~~~~~~~~~~L~~e~~~lq~~~~~le~~~~ele~~~~el~~~~ee~~~ 1027 (1507)
..... .+.++......++....+.+..+...+....+.....++
T Consensus 950 ~~~~~---------------------------------~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~e--- 993 (1463)
T COG5022 950 YVKLP---------------------------------ELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSE--- 993 (1463)
T ss_pred HHhhH---------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcccHHHH---
Confidence 00000 111111122221111111111111111111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHH---HHHHHHhhccc-CchhhhhhhhcCCCC--CCCc--chhcccCCchhhH
Q 000442 1028 EALEAESKIIELKTCMQRLEEKLSDIETE---DQILRHQALFN-SSSRKMSEQLSMKTP--EPQS--ATAAKSFGTEADS 1099 (1507)
Q Consensus 1028 ~l~~lE~e~~~L~~~~~~Le~~l~~LE~E---~~~Lk~qal~~-s~~~~l~~~~~~~l~--e~~~--~~~~~~~~~~~~~ 1099 (1507)
+....+++.....+...+++..+.+++. +..+....-.. +.. ...+...| +... ..+.. ....
T Consensus 994 -l~~~~~~l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~~s~~----~~~~~~~~~~~~~~~~~~~~~----~l~~ 1064 (1463)
T COG5022 994 -LKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSES----TELSILKPLQKLKGLLLLENN----QLQA 1064 (1463)
T ss_pred -HHHHHHHHHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhhccch----hhhhccCcccchhhhhhHHHH----Hhhh
Confidence 1111111111111111122222222211 11111110000 000 00000000 0000 00000 0000
Q ss_pred HHHH-----------hhHHHhhhhHHHHHHhhc-cCcCc-cCCCCchHHHH-HHHHHhccc-cchhhHHHHHHHHHHHHH
Q 000442 1100 QLRK-----------SQIERQHENLDALLKCVS-QDLGF-SQEKPVAAFTI-YKCLLHWGS-FEAEKTSVFDRLIQLIGS 1164 (1507)
Q Consensus 1100 ~~~~-----------~l~~~~~e~~~~L~~~l~-~~~~~-~~~~p~~A~il-f~clr~~~~-~~~~~~~ll~~i~~~I~~ 1164 (1507)
+... ....+..+....+++.+. .++.. ...-+.||..+ +...-+|.. ...+...++...+..++.
T Consensus 1065 ~~~~l~~~r~~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~~~~~~~~~~~le~ 1144 (1463)
T COG5022 1065 RYKALKLRRENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEISKFLSQLVNTLEP 1144 (1463)
T ss_pred hHhhhhhcCcccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchhhHHHHHHHHhhccchHHhhhhHHHHHHhhccc
Confidence 0000 011122344445555443 22222 12223354444 333345654 444445666666666666
Q ss_pred hhcCC--CCC-ccchhhHHhHHHHHH---HHHhhhhccCCCCCCCCCCCCCCcccccccccccCCccchhhHHHHHHHhh
Q 000442 1165 AIENP--DSN-DHLAYWLSNASTLLF---LLQCSLKASGAAGSSQRKPPQPTSFFGRMTQGFRSSSASLSVDVVRQVEAK 1238 (1507)
Q Consensus 1165 ~i~~~--~d~-~~lafWLSN~~~Ll~---~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 1238 (1507)
+...- ++. ....||.+|...+++ |.-.. +....... + .+ +....+.. .|.
T Consensus 1145 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~------~---~d-~~~~~s~s---~v~-- 1200 (1463)
T COG5022 1145 VFQKLSVLQLELDGLFWEANLEALPSPPPFAALS---------EKRLYQSA------L---YD-EKSKLSSS---EVN-- 1200 (1463)
T ss_pred hhccccchhccccccccccccccCCCCCchhhcc---------hhhhhHhh------h---hc-ccccccHH---HHH--
Confidence 54433 233 347899999988763 11000 00000000 0 00 00001111 111
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHhhhcCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q 000442 1239 YPALLFKQQLTAYVETFYGIIRDNLKKDLSPHLSSCIQAPRMSKG--NAIKSPASSRGSSPKSSPWNSIIDIVNGLLRSL 1316 (1507)
Q Consensus 1239 ~p~~~~~q~L~~~~~~iy~~l~~~~~~~l~~~L~~~i~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~il~~L~~~l~~L 1316 (1507)
..+..+..+..++|..|.... .+.+++...+ .|..... .+...+...+ ..+...+.++++.+++.+..++
T Consensus 1201 ----~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~n~i~~~~ 1272 (1463)
T COG5022 1201 ----DLKNELIALFSKIFSGWPRGD--KLKKLISEGW-VPTEYSTSLKGFNNLNKKF-DTPASMSNEKLLSLLNSIDNLL 1272 (1463)
T ss_pred ----HHHHHHHHHHHhccccchhhh--hhhhhhhhcc-chhhhccccccccchhhcc-cCcccCcHHHHHHHHHHHHHHH
Confidence 344457778888888887654 2333332111 0100000 0000001111 2345667889999999999999
Q ss_pred HhcCCCHHHHHHHHHHHHHHHhHHHHHHhhccCCccccchhhHHHhchHHHHHHHhhccccccCChHHHhHHHHHHHHHH
Q 000442 1317 KENFVPRVLIQRIFTQIFSYINVQLFNSLLLRRECCTFSNGEYVKQGLAELELWCGEAKEEYAGSSWDELKHTRQAVGFL 1396 (1507)
Q Consensus 1317 ~~~~v~~~l~~Q~f~Qlf~~ina~lfN~Ll~r~~~cs~s~G~qIr~nls~Le~W~~~~~~~~~~~~~~~L~~l~Qa~~lL 1396 (1507)
+.+.+.+.+....++++.-++++.+||.|..+..-..|+.|-++.+|.+.+.+||+.++ ..++..+|+++.|++..+
T Consensus 1273 ~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~~~~---i~~~~~~l~~l~q~~k~~ 1349 (1463)
T COG5022 1273 SSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCREFE---ISDVDEELEELIQAVKVL 1349 (1463)
T ss_pred HHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHHhhc---ccchHHHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999998 456668999999999999
Q ss_pred hccCCCccCHHHHHhccCCCCCHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHhhhc
Q 000442 1397 VIHQKTRISYDEITNDLCPVLSVQQLYRVCTLYWDDDYNTQSVSPDVISSMKILMT 1452 (1507)
Q Consensus 1397 q~~kk~~~~~~~i~~~~C~~Ls~~Ql~kiL~~Y~~d~~e~~~v~~~~i~~v~~~~~ 1452 (1507)
|+.+++..+++++ .+.|.+|+|.|+.+|+.+|.|.++| .++|.++.++|.+...
T Consensus 1350 ~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ke~~~~~~a~~~ 1403 (1463)
T COG5022 1350 QLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLPKEILKKIEALLI 1403 (1463)
T ss_pred hhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCChHHHHHHHhhhhh
Confidence 9988777777777 5999999999999999999999998 5999999977655444
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PRK07196 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PRK08972 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >PRK08472 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >PRK06315 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK09099 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >COG3074 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >PF09738 DUF2051: Double stranded RNA binding protein (DUF2051); InterPro: IPR019139 This entry represents transcriptional repressors which preferentially bind to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >smart00333 TUDOR Tudor domain | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK07721 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PRK05688 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >PRK15422 septal ring assembly protein ZapB; Provisional | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PRK06002 fliI flagellum-specific ATP synthase; Validated | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >COG0802 Predicted ATPase or kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK10869 recombination and repair protein; Provisional | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase | Back alignment and domain information |
|---|
| >COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10646 ADP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold) | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06936 type III secretion system ATPase; Provisional | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >TIGR03496 FliI_clade1 flagellar protein export ATPase FliI | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >PRK09112 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >TIGR01026 fliI_yscN ATPase FliI/YscN family | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK14528 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PRK00698 tmk thymidylate kinase; Validated | Back alignment and domain information |
|---|
| >PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1507 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 0.0 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-172 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 1e-172 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 1e-172 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-172 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-172 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-172 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-172 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-171 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 1e-171 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-171 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 1e-171 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 1e-171 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-171 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-171 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-171 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-170 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-170 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-170 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-170 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-169 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-169 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-168 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-168 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-164 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-160 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-158 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-146 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-146 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-146 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-146 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-146 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 1e-145 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 1e-144 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-144 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-142 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-142 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-142 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-140 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-139 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-139 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-138 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-138 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-138 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-138 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-138 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-137 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 1e-137 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-135 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-134 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-134 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-134 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 1e-133 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-133 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-133 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-132 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-129 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-128 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-125 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-125 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1320 bits (3417), Expect = 0.0
Identities = 414/1103 (37%), Positives = 600/1103 (54%), Gaps = 63/1103 (5%)
Query: 1 MAAPVGLVVGSIVWTEDPEEAWIDGEVEEV---NDEDIKIACTSGKTVVAKAS----NVY 53
MAA + VW DPEE W E+ + D+ +++ GK + +
Sbjct: 1 MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP 60
Query: 54 PKDPEFPQCGVDDMTKLAYLHEPGVLQNLRCRY-DVNEIYTYTGNILIAVNPFRRLPHLY 112
P G +D+T L+YLHEP VL NL+ R+ D IYTY G +L+A+NP+ +LP +Y
Sbjct: 61 PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IY 119
Query: 113 DNHMMEQYKGASLGELSPHPFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQY 172
++ Y G ++G++ PH FA+A+ AY+ M + +QSI+VSGESGAGKT S K M+Y
Sbjct: 120 GEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRY 179
Query: 173 LAYMGGRTATEKQSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDERGRISGA 232
A + G + +VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FD+R RI GA
Sbjct: 180 FATVSGSA--SEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGA 237
Query: 233 AIRTYLLERSRVCQVSDPERNYHCFYMLCAG-PAEDIEKYKLGNPRMFHYLNQSNFYELD 291
+RTYLLE+SRV ++ ERNYH FY LCA + + +LGN FHY Q +D
Sbjct: 238 NMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVID 297
Query: 292 GVDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSR 351
G+D++KE V TR+A ++GI+ Q IFR++A ILHLGNVEFA + + P
Sbjct: 298 GIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKH--- 354
Query: 352 SHLKTAAELFMCDEKSLEDSMCKRVIMTRDESITKWLDPAAAALNRDALAKIVYSRLFDW 411
L +L D + + +C R + T E+ K + A RDALAK +Y+ LF+W
Sbjct: 355 DPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNW 414
Query: 412 LVNKINNTIGQDPNSKVLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQ 471
+V+ +N + IGVLDIYGFE+F+ NSFEQFCIN NEKLQQ FN HVFK+EQ
Sbjct: 415 IVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQ 474
Query: 472 EEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKD 531
EEY +E+I W+ I+F DNQ ++LIE K G++ LLDE C P+ + +T+AQKLY T +
Sbjct: 475 EEYMKEQIPWTLIDFYDNQPCINLIEAKM-GVLDLLDEECKMPKGSDDTWAQKLYNTHLN 533
Query: 532 -HKRFSKPKLSLTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSAS-GCPFVSGLF 589
F KP+LS F I H+A V YQ E FL+KNKD V E VL +S + LF
Sbjct: 534 KCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELF 593
Query: 590 PPLTEESS---------------------------KSSKFSSIGSRFKQQLQALLETLSA 622
+ S ++G +F+ L L+ETL+A
Sbjct: 594 QDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNA 653
Query: 623 TEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAGYPTRKMFHEFLSRFRI 682
T PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R + EF SR+R+
Sbjct: 654 TTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRV 713
Query: 683 LAPKVFDGSCDEVTACKRLLQKVNL--KGYQIGKTKVFLRAGQMAELDSRRTQVLGQSAI 740
L + D D CK +L+K+ L YQ GKTK+F RAGQ+A L+ R L + I
Sbjct: 714 LMKQK-DVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACI 772
Query: 741 IIQSKVRSYFAHKRFNLLRCAAIQIQTLCRGQNGRYQYERMRREAASVKIQKYSRMCLAR 800
IQ +R + K++ +R AAI IQ RG R +RR A++ IQK+ RM + R
Sbjct: 773 RIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVR 832
Query: 801 KDYHKLRSSAISIQTGLRGMAAHNDLRLMKQTKAAIVIQSQYRQYLGRYRYLQMKKAAIV 860
K Y +R + I++Q LRG N ++M + +I+IQ R +L R Y + KA +
Sbjct: 833 KRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTLKAIVY 892
Query: 861 VQCAWRGKVARGELRKLKMAAKETGALQAAKSKLEKEVEELTWRLQLEKRMRADLEEAKT 920
+QC +R +A+ EL+KLK+ A+ + LE ++ +L ++ + + L E
Sbjct: 893 LQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMN 952
Query: 921 QENAKLKSALQEMQQQFEETKTLLIKEREAAKKTTEALLIMEREAAEKEAVQVPVIREVP 980
+ ++++ E L E AK T +L ++ E A+ E
Sbjct: 953 NLEITYSTETEKLRSDVER----LRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEK- 1007
Query: 981 VIDHVMVNKLTAENEELKALVSSLEKKIDETERKFEETNKLSEERLKEALEAESKIIELK 1040
+ E + LVS L+++ + + EE N+ ++ KE E K
Sbjct: 1008 ---KTIEEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEK----- 1059
Query: 1041 TCMQRLEEKLSDIETEDQILRHQ 1063
E K +++ D+ LR+Q
Sbjct: 1060 --KLVEETKQLELDLNDERLRYQ 1080
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1 Length = 602 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} Length = 168 | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1507 | ||||
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 1e-06 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 2e-06 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 0.0 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.002 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 785 bits (2028), Expect = 0.0
Identities = 281/784 (35%), Positives = 441/784 (56%), Gaps = 37/784 (4%)
Query: 29 EVNDEDIKIACTSGKTVVAKASNVYPKDPEFPQCGVDDMTKLAYLHEPGVLQNLRCRYDV 88
+ +D D + K ++ + + + P+F ++DM + YL+E VL NLR RY
Sbjct: 4 DFSDPDFQYLAVDRKKLMKEQTAAFMNPPKFE--KLEDMANMTYLNEASVLYNLRSRYTS 61
Query: 89 NEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPHPFAIADSAYRLMINEGM 148
IYTY+G IAVNP+RRLP +Y + ++ +Y+G E+ PH F++AD+AY+ M+ +
Sbjct: 62 GLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRE 120
Query: 149 SQSILVSGESGAGKTESTKMLMQYLAYMGGRTATEKQ--------SVEQQVLESNPVLEA 200
+QS L++GESGAGKTE+TK ++ YLA + + + S+E Q++++NPVLEA
Sbjct: 121 NQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEA 180
Query: 201 FGNAKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVSDPERNYHCFYML 260
+GNAKT RNNNSSRFGKF+ + F G+I+GA I TYLLE+SRV ERNYH FY +
Sbjct: 181 YGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQI 240
Query: 261 CAGPAEDIEKYKLGNPR--MFHYLNQSNFYELDGVDESKEYVKTRKAMEVVGINSDEQDA 318
C+ ++ L P ++ ++NQ +D +D+ +E+ +A +++G +E+ +
Sbjct: 241 CSNAIPELNDVMLVTPDSGLYSFINQGC-LTVDNIDDVEEFKLCDEAFDILGFTKEEKQS 299
Query: 319 IFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELFMCDEKSLEDSMCKRVIM 378
+F+ A+ILH+G ++F + + +E + + A L + L ++ K +
Sbjct: 300 MFKCTASILHMGEMKFKQRPREEQAESDGT---AEAEKVAFLCGINAGDLLKALLKPKVK 356
Query: 379 TRDESITKWLDPAAAALNRDALAKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGF 438
E +TK + + ALAK +Y R+F+WLV ++N T+ IGVLDI GF
Sbjct: 357 VGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGF 416
Query: 439 ESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEK 498
E F NSFEQ CIN TNE+LQQ FN H+F +EQEEY +E I W +I+F + + + +
Sbjct: 417 EIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIE 476
Query: 499 KPGGIIALLDEACMFPRSTHETFAQKLYQTFKDHKRF-------SKPKLSLTDFTICHYA 551
KP GI+++L+E CMFP++ ++F KLYQ R ++P F + HYA
Sbjct: 477 KPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYA 536
Query: 552 GDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPLTEES-------SKSSKFSS 604
G+V Y +L+KNKD + A+L AS P V+ LF E + KSS F +
Sbjct: 537 GNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQT 596
Query: 605 IGSRFKQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISC 664
I + ++ L L++ L +T PH++RC+ PN + +P + + VL QL+C GVLE IRI
Sbjct: 597 ISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICR 656
Query: 665 AGYPTRKMFHEFLSRFRILAPKVF-DGSCDEVTACKRLLQKVNLKG--YQIGKTKVFLRA 721
G+P+R ++ EF R+ ILAP G D T +++L + + Y++G TKVF +A
Sbjct: 657 KGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKA 716
Query: 722 GQMAELDSRRTQVLGQSAIIIQSKVRSYFAHKRFNLLR---CAAIQIQTLCRGQNGRYQY 778
G + L+ R + L + + Q+ +R Y K + L+ IQ R +
Sbjct: 717 GVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 776
Query: 779 ERMR 782
+ +
Sbjct: 777 QWWK 780
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1507 | |||
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 97.54 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 97.46 | |
| d1w7ja1 | 58 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 97.34 | |
| d1br2a1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 96.06 | |
| d2mysa1 | 46 | Myosin S1 fragment, N-terminal domain {Chicken (Ga | 95.94 | |
| d1kk8a1 | 48 | Myosin S1 fragment, N-terminal domain {Bay scallop | 95.25 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 89.66 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 87.82 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 87.14 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 86.36 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 82.22 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 81.11 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 80.33 |
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]
Probab=100.00 E-value=0 Score=1643.64 Aligned_cols=725 Identities=37% Similarity=0.662 Sum_probs=657.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCC
Q ss_conf 77899999978976422686899377999999642258612124740788468988999988899998302997888887
Q 000442 52 VYPKDPEFPQCGVDDMTKLAYLHEPGVLQNLRCRYDVNEIYTYTGNILIAVNPFRRLPHLYDNHMMEQYKGASLGELSPH 131 (1507)
Q Consensus 52 ~~~~~~~~~~~~~~Dl~~L~~l~e~~vl~~L~~R~~~~~iYT~~G~~LiavNP~~~l~~~y~~~~~~~y~~~~~~~~~PH 131 (1507)
.++.||+ ..+++|||+.|++||||+|||+|+.||..++||||+|++|||||||+.+| +|++++++.|+++..+++|||
T Consensus 28 ~~~~np~-~~d~veDl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~-ly~~~~~~~y~~~~~~~~pPH 105 (794)
T d2mysa2 28 PFDMNPP-KYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEAPPH 105 (794)
T ss_dssp CCCCCCT-TSSSCSBGGGCSCCCHHHHHHHHHHTTTTTCCEEECSSCEEEECCSSCCG-GGCTTHHHHTTTCCTTSSCSC
T ss_pred CCCCCCC-CCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCCC
T ss_conf 8789986-33476310078879889999999999768996245788899978998899-999999999708988999980
Q ss_pred HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC--------CCCCCHHHHHHHCCCHHHHCCC
Q ss_conf 25714898999883399549997089899951678999999988317676--------6668499999720504431066
Q 000442 132 PFAIADSAYRLMINEGMSQSILVSGESGAGKTESTKMLMQYLAYMGGRTA--------TEKQSVEQQVLESNPVLEAFGN 203 (1507)
Q Consensus 132 ifaia~~Ay~~m~~~~~~QsIiisGeSGaGKT~~~k~~~~yla~~~~~~~--------~~~~~i~~~il~snpileaFGn 203 (1507)
|||||+.||+.|..+++||||||||||||||||++|++|+||+.+++.+. .....++++|+++|||||||||
T Consensus 106 ifaiA~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~i~~~npiLEAFGN 185 (794)
T d2mysa2 106 IFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQSGKMQGTLEDQIISANPLLEAFGN 185 (794)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHHHHHHHHTCCCC-----------CCHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 89999999999987499807999717988789999999999998707787753111355567499999976269998548
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCEECCCCCCCCCEEEECCCC-CCHHHHHHCCCC-CCCCCCC
Q ss_conf 44558899896444578888389961102453100367401003799984116600346-995458641799-9876533
Q 000442 204 AKTLRNNNSSRFGKFVELQFDERGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCA-GPAEDIEKYKLG-NPRMFHY 281 (1507)
Q Consensus 204 AkT~~N~nSSRfgk~~~l~f~~~g~i~ga~i~~yLLEksRv~~~~~~ErnfHiFYql~~-~~~~~~~~l~l~-~~~~~~y 281 (1507)
|||++|+||||||||++|+||.+|.|+||+|.+|||||||||+|++||||||||||||+ +++++++.+.|. ++.+|+|
T Consensus 186 AkT~~N~NSSRFgk~~~l~f~~~g~i~ga~i~~ylLEksRv~~~~~gErnfHIFYqll~g~~~~~~~~~~l~~~~~~y~y 265 (794)
T d2mysa2 186 AKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHY 265 (794)
T ss_dssp ECCSSCSSEECSEEEEEEEECSSSSEEECCEEEECCCGGGGTCCCTTCCCBHHHHHHTTCSSHHHHHHHTCCSCGGGCGG
T ss_pred CCCCCCCCHHHHHEEEEEEECCCCCEEEEEEEEEECCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCHHHHHH
T ss_conf 75566687201110136677799978668999985378537734765441999999983999999998626898777233
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHC
Q ss_conf 55899544589772999999996313526683668899999999987157133217878887657832379999999871
Q 000442 282 LNQSNFYELDGVDESKEYVKTRKAMEVVGINSDEQDAIFRVVAAILHLGNVEFAKGEEADSSEPKDEKSRSHLKTAAELF 361 (1507)
Q Consensus 282 l~~~~~~~~~~~~d~~~f~~~~~al~~lg~~~~~~~~i~~ilaaiLhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LL 361 (1507)
|++|.+ .++++||+++|..++.||.+|||+++++..||+|||||||||||+|....+.+.+.+.+.. .++.+|.||
T Consensus 266 l~~~~~-~~~~~~d~~~f~~~~~al~~lg~s~~e~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~---~~~~~a~LL 341 (794)
T d2mysa2 266 VSEGEI-TVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTE---VADKAAYLM 341 (794)
T ss_dssp GCSSCC-CCTTCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEECTTSCCEEESCSS---HHHHHHHHH
T ss_pred CCCCCC-CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHH---HHHHHHHHH
T ss_conf 179980-4699776999999999999809999999999998888751011167524774212236637---999999881
Q ss_pred CCCHHHHHHHHHCCEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 99999999964102674048714303899899885999999999999999988532002889998603788521466778
Q 000442 362 MCDEKSLEDSMCKRVIMTRDESITKWLDPAAAALNRDALAKIVYSRLFDWLVNKINNTIGQDPNSKVLIGVLDIYGFESF 441 (1507)
Q Consensus 362 gv~~~~l~~~l~~~~~~~~~e~~~~~l~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgiLDi~GFE~f 441 (1507)
||++++|..+|+++++.++++.+++++++++|.++||+|||+||++||+|||.+||.++.+......+||||||||||+|
T Consensus 342 gi~~~~L~~~L~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~LY~~LF~wiV~~IN~~l~~~~~~~~~IgILDifGFE~f 421 (794)
T d2mysa2 342 GLNSAELLKALCYPRVGVGNEAVTKGETVSEVHNSVGALAKAVYEKMFLWMVIRINQQLDTKQPRQYFIGVLDIAGFEIF 421 (794)
T ss_dssp TCCHHHHHHHHHSCBCCCSSSCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCCCEEEEEEEEECCCCC
T ss_pred CCCHHHHHCCCEEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCC
T ss_conf 97988953041056898336650463889999889998999999999999998766320667776517898532555544
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 88965687865424789979999776542877632199753344457087899873087732103200006999975989
Q 000442 442 KTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTREEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETF 521 (1507)
Q Consensus 442 ~~NsfeqlciNyanE~lq~~f~~~~f~~eq~~y~~Egi~~~~i~~~dn~~~ldli~~~~~Gil~lLdee~~~p~~~d~~~ 521 (1507)
+.||||||||||||||||++|++++|+.||++|.+|||+|..|+|+||..+++++..+|.|||++|||||++|++||++|
T Consensus 422 ~~NsfEQLcINyaNEkLQq~f~~~~F~~Eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~kp~Gil~lLdee~~~~~~td~~f 501 (794)
T d2mysa2 422 DFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTSF 501 (794)
T ss_dssp SSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCSTHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHH
T ss_conf 56638899999999999999999999989999975487765677779879999998485327999988614766518899
Q ss_pred HHHHHHHH-CCCCCCCCCCCC----CCCEEEEEECCCEEEECCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99999880-699996689889----9990899613412560323001115989098999998259964237689883234
Q 000442 522 AQKLYQTF-KDHKRFSKPKLS----LTDFTICHYAGDVTYQTELFLDKNKDYVVPEHQAVLSASGCPFVSGLFPPLTEES 596 (1507)
Q Consensus 522 ~~kl~~~~-~~~~~~~~~~~~----~~~F~i~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~~ 596 (1507)
++|++..| ++++.|.+|... +..|+|+||||+|+|+++||++||+|.++++++++++.|++++++.||+.....+
T Consensus 502 ~~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~ 581 (794)
T d2mysa2 502 KNKLYDEHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLALLFATYGGEA 581 (794)
T ss_dssp HHHHHHHHBTTBSSEECCCCC---CCCSEEEECSSCEEEECCSSHHHHHHCCCCHHHHHHHHTCSSHHHHHHTSCC----
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEHHCCHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCC
T ss_conf 99999873578856368875678788716898307636044126577555844379999998679889998664024433
Q ss_pred C----------CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCC
Q ss_conf 6----------888875536999999999999872799869998068999998888702377763010366779742016
Q 000442 597 S----------KSSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNVLKPSIFENTNVLQQLRCGGVLEAIRISCAG 666 (1507)
Q Consensus 597 ~----------~~~~~~tv~~~f~~~l~~L~~~l~~t~~hfirCIkpN~~~~~~~fd~~~v~~QLr~~gvle~~ri~~~g 666 (1507)
. ++.++.||+++|+.||+.||++|++|+||||||||||+.+.|+.||...|++||||+||+|++||++.|
T Consensus 582 ~~~~~~~~~~~~~~~~~Tv~~~fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~vri~r~G 661 (794)
T d2mysa2 582 EGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKG 661 (794)
T ss_dssp ----------------CCSHHHHHHHHHHHHHHHHTSEEEEEEEECCCTTCCTTCCCHHHHHHHHHHHSHHHHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHCC
T ss_conf 35667768777787524089999999999999875689868886468865587643569999999862789999999668
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCC--CCCCHHHHHHHHHHHCCCC--CCEECCCEEECCCCHHHHCCCCCCCCCCHHHHHH
Q ss_conf 98655447899987430567668--9841399999985212877--5100530000032101100111001352146888
Q 000442 667 YPTRKMFHEFLSRFRILAPKVFD--GSCDEVTACKRLLQKVNLK--GYQIGKTKVFLRAGQMAELDSRRTQVLGQSAIII 742 (1507)
Q Consensus 667 yp~r~~~~~F~~ry~~l~~~~~~--~~~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~Le~~r~~~l~~~ai~I 742 (1507)
||+|++|.+|+.||++|+|.... ...|.++.|+.|+..++.+ .|++|+||||||++.+..||.+|.+.+.++++.|
T Consensus 662 yp~R~~~~eF~~RY~~L~~~~~~~~~~~d~~~~~~~ll~~~~~~~~~~~iGkTKVFlr~~~~~~LE~~r~~~l~~~~~~I 741 (794)
T d2mysa2 662 FPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKLLGGGDVDHTQYAFGHTKVFFKAGLLGLLEEMRDDKLAEIITAT 741 (794)
T ss_dssp CCCEEEHHHHHHHHGGGTTTC------CCTTHHHHHHTTSSSCCSSSEEEETTEEEECTTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 98636499999999985834244556689999999999966978135871797598674399999999999999999999
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 86421010110002001123777653013665310000002227999999999999999653
Q 000442 743 QSKVRSYFAHKRFNLLRCAAIQIQTLCRGQNGRYQYERMRREAASVKIQKYSRMCLARKDYH 804 (1507)
Q Consensus 743 Q~~~R~~l~Rk~~~~~r~aai~iQa~~Rg~laR~~~~~~r~~~aai~IQ~~~R~~~~Rk~~~ 804 (1507)
|++||||++|++|++++ ++..|+++||++||+|++||+|.
T Consensus 742 Q~~~Rg~l~Rk~~~~~~----------------------~~r~a~~~IQ~~~R~~~~~r~~~ 781 (794)
T d2mysa2 742 QARCRGFLMRVEYRAMV----------------------ERRESIFCIQYNVRSFMNVKHWP 781 (794)
T ss_dssp HHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHHHHHHHHHH----------------------HHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 99999999999999999----------------------99999999999999999982369
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
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| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
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| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
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| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
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| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1w7ja1 b.34.3.1 (A:5-62) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
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| >d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
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| >d2mysa1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a1 b.34.3.1 (A:29-76) Myosin S1 fragment, N-terminal domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
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| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
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| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
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| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
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| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
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