Citrus Sinensis ID: 000453
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1491 | 2.2.26 [Sep-21-2011] | |||||||
| P54697 | 2245 | Myosin-J heavy chain OS=D | yes | no | 0.584 | 0.387 | 0.433 | 0.0 | |
| Q9QYF3 | 1828 | Unconventional myosin-Va | yes | no | 0.648 | 0.528 | 0.405 | 0.0 | |
| Q02440 | 1829 | Unconventional myosin-Va | yes | no | 0.642 | 0.523 | 0.404 | 0.0 | |
| Q9ULV0 | 1848 | Unconventional myosin-Vb | yes | no | 0.655 | 0.529 | 0.387 | 0.0 | |
| Q9Y4I1 | 1855 | Unconventional myosin-Va | no | no | 0.649 | 0.521 | 0.403 | 0.0 | |
| Q99104 | 1853 | Unconventional myosin-Va | yes | no | 0.648 | 0.521 | 0.400 | 0.0 | |
| P21271 | 1818 | Unconventional myosin-Vb | no | no | 0.629 | 0.515 | 0.399 | 0.0 | |
| P70569 | 1846 | Unconventional myosin-Vb | no | no | 0.629 | 0.508 | 0.391 | 0.0 | |
| P08799 | 2116 | Myosin-2 heavy chain OS=D | no | no | 0.477 | 0.336 | 0.454 | 0.0 | |
| Q876G9 | 1568 | Myosin-2 OS=Saccharomyces | N/A | no | 0.641 | 0.609 | 0.388 | 0.0 |
| >sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 | Back alignment and function desciption |
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Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/950 (43%), Positives = 569/950 (59%), Gaps = 79/950 (8%)
Query: 5 QVVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVN 64
+V +SKVF ++ + GVDD++ LS+LHEP +L NL RY LN+IYTY G ILIA+N
Sbjct: 64 EVKIPLSKVFQKNPDI-LEGVDDLSFLSHLHEPAILHNLHHRYNLNQIYTYIGKILIAIN 122
Query: 65 PFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKT 124
P+ LP LY M+ Y G G L+PHV+AV + A++ M +G S SILVSGESGAGKT
Sbjct: 123 PYTSLP-LYGKEMISAYYGKQLGTLAPHVYAVAEDAFKDMRYDGTSQSILVSGESGAGKT 181
Query: 125 ETTKMLMRYLAYLGG-------RSGVEG-----------------------RTVEQQVLE 154
ETTK L++Y A +G S + G ++VE++VLE
Sbjct: 182 ETTKFLLQYFAAMGNMIKESTSSSSINGINTSSDGIPVTPPPSPMKKSPVDKSVEERVLE 241
Query: 155 SNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERN 214
S P+LEAFGNAKT+RN+NSSRFGKF+EI F++ G I GA I TYLLE+SR+ + ERN
Sbjct: 242 STPLLEAFGNAKTLRNDNSSRFGKFIEIHFNEMGSIIGAKILTYLLEKSRIVRQVYNERN 301
Query: 215 YHCFY-LLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLATRRAMDIVGIS 273
YH FY LL A E K L + + + YLN+S C+E++GVSD + T AM + GI+
Sbjct: 302 YHIFYQLLSGASEELKEKLNLKTIEEYSYLNKSGCFEIEGVSDEEHFNKTCHAMQVAGIT 361
Query: 274 DQEQEAIFRVVAAILHLGNIDFAK--GKEIDSSVIKDEKSRFHLNMTAELLRC-DAQSLE 330
EQE +FR+++AIL +GN +F G DS + D R L + LL C L
Sbjct: 362 LVEQENVFRILSAILLIGNFEFENIAGSNDDSCQLID---RDPLEKVSVLLGCAQPDELL 418
Query: 331 DALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKIN--ISIGQDPDSK 388
++++ R +VT +E A +RD+L+ +Y +FDW+V KIN +SI SK
Sbjct: 419 NSMLTRKVVTGKESYISHNTKERAENARDSLSMFLYGMMFDWLVVKINSSMSISTQQKSK 478
Query: 389 SIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFI 448
S IGVLDIYGFESF+ N FEQFCIN+ NEKLQQ FNQHVFK EQ+EY +E+I+WSYI+F
Sbjct: 479 SFIGVLDIYGFESFEVNGFEQFCINYANEKLQQLFNQHVFKEEQQEYIKEKIDWSYIDFN 538
Query: 449 DNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLSRTDFTI 508
DNQD LDLIEKKP I+ LLDE MFPK+T +T + KL +++F KP+ S T FTI
Sbjct: 539 DNQDTLDLIEKKPICILTLLDEETMFPKATPQTLATKLYSKMTSHSKFEKPRFSSTAFTI 598
Query: 509 LHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGL------FPPLP-------- 554
HYAG+VTY+ + FLDKNKD+++ E ++L + SF+ L F P
Sbjct: 599 NHYAGKVTYETDQFLDKNKDFIIPEQISILQRSNFSFIKVLMSHSDKFTQSPGGHPQGNG 658
Query: 555 ---------EESSKSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFEN 605
S S KF S+GS+F L +LM+T++ T PHY+RC+KPN P F
Sbjct: 659 GPTSSNTKGTSGSSSMKFLSVGSQFSTSLATLMKTISTTTPHYVRCIKPNPEKLPQTFNK 718
Query: 606 FNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNY------------ 653
+VI QLRCGGV+E++RI CAG+PTRR EF R+ IL + +
Sbjct: 719 QDVIHQLRCGGVMESVRICCAGFPTRRLLSEFYQRYKILYVKDINTGSGGGKKGSNNNKI 778
Query: 654 -DDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTY 710
D ++ Q +L L Y+IG TKVFLRAGQ+A L+ R E L +A IQ++ + Y
Sbjct: 779 KDPKILVQNLLTGIELSDDKYKIGLTKVFLRAGQLASLEDMRLEQLDRSATVIQKRWKGY 838
Query: 711 IARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSS 770
+ RK + LR+A++I+Q+ LR A++ L+R +A+ IQ +RA+ + Y +R +
Sbjct: 839 LYRKRYKQLRDASLIIQTKLRSVHAKQQLSALQRTHSAILIQKVWRAHRDRVQYQKIRDA 898
Query: 771 AMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRV 830
++ LQT +R + + + AAII Q + R + K R II+ Q WR ++
Sbjct: 899 SLQLQTVMRRHLFSEQVHRERCENAAIILQTKIRQILSKREVDKKLRGIILIQARWRMKL 958
Query: 831 ARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEAK 880
A+R +L+ AR +QE KNKL++++EEL WRL E + + LE+ K
Sbjct: 959 AKRVYIQLRAEARSLRTVQEQKNKLQEKLEELQWRLTSEAKRKQQLEDQK 1008
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Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 | Back alignment and function description |
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| >sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 | Back alignment and function description |
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| >sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 | Back alignment and function description |
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| >sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 | Back alignment and function description |
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| >sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 | Back alignment and function description |
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| >sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3 | Back alignment and function description |
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| >sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1491 | ||||||
| 359482502 | 1540 | PREDICTED: myosin-H heavy chain-like [Vi | 0.996 | 0.964 | 0.870 | 0.0 | |
| 297743058 | 1610 | unnamed protein product [Vitis vinifera] | 0.996 | 0.922 | 0.870 | 0.0 | |
| 255546055 | 1534 | myosin XI, putative [Ricinus communis] g | 0.996 | 0.968 | 0.850 | 0.0 | |
| 224128654 | 1462 | predicted protein [Populus trichocarpa] | 0.980 | 1.0 | 0.857 | 0.0 | |
| 224091182 | 1539 | predicted protein [Populus trichocarpa] | 0.996 | 0.965 | 0.841 | 0.0 | |
| 56201391 | 1529 | myosin XI [Nicotiana tabacum] | 0.996 | 0.971 | 0.839 | 0.0 | |
| 297738619 | 1547 | unnamed protein product [Vitis vinifera] | 0.995 | 0.959 | 0.841 | 0.0 | |
| 116047947 | 1529 | myosin XI-K [Nicotiana benthamiana] | 0.996 | 0.971 | 0.838 | 0.0 | |
| 359484294 | 1637 | PREDICTED: myosin-Vb-like [Vitis vinifer | 0.995 | 0.907 | 0.841 | 0.0 | |
| 449452532 | 1463 | PREDICTED: unconventional myosin-Va-like | 0.981 | 1.0 | 0.836 | 0.0 |
| >gi|359482502|ref|XP_002274978.2| PREDICTED: myosin-H heavy chain-like [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 2697 bits (6992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1294/1486 (87%), Positives = 1391/1486 (93%)
Query: 6 VVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNP 65
VV ++SKVFP+DTEAP GGVDDMTKLSYLHEPGVLQNLA RYELNEIYTYTGNILIA+NP
Sbjct: 55 VVANISKVFPKDTEAPPGGVDDMTKLSYLHEPGVLQNLAARYELNEIYTYTGNILIAINP 114
Query: 66 FQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTE 125
FQRLPHLYDTHMMEQYKGA FGELSPHVFAV D AYRAMINEGKSNSILVSGESGAGKTE
Sbjct: 115 FQRLPHLYDTHMMEQYKGAGFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTE 174
Query: 126 TTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFD 185
TTKMLMRYLA+LGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFD
Sbjct: 175 TTKMLMRYLAHLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFD 234
Query: 186 KNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQ 245
K+GRISGAA+RTYLLERSRVCQIS PERNYHCFYLLCAAP E+I +YKLG+P++FHYLNQ
Sbjct: 235 KSGRISGAAVRTYLLERSRVCQISTPERNYHCFYLLCAAPPEEIERYKLGNPRTFHYLNQ 294
Query: 246 SNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSV 305
SNCYELDGV+D HEYLATRRAMDIVGIS+QEQEAIFRVVAAILHLGNI+FAKGKEIDSSV
Sbjct: 295 SNCYELDGVNDGHEYLATRRAMDIVGISEQEQEAIFRVVAAILHLGNINFAKGKEIDSSV 354
Query: 306 IKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTI 365
IKDE+SRFHLNMTAELL+CDAQSLEDALIKRVMVTPEE+ITRTLDPVNA+ SRDALAKTI
Sbjct: 355 IKDEQSRFHLNMTAELLKCDAQSLEDALIKRVMVTPEEIITRTLDPVNAIGSRDALAKTI 414
Query: 366 YSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQ 425
YSRLFDW+V+KIN SIGQDP+SKSIIGVLDIYGFESFKCNSFEQFCIN+TNEKLQQHFNQ
Sbjct: 415 YSRLFDWLVDKINNSIGQDPNSKSIIGVLDIYGFESFKCNSFEQFCINYTNEKLQQHFNQ 474
Query: 426 HVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQK 485
HVFKMEQEEYT+EEINWSYIEF+DNQDVLDLIEKKPGGII+LLDEACMFPKSTHETF+QK
Sbjct: 475 HVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQK 534
Query: 486 LCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSF 545
L QTF N RF KPKLSRTDFTI HYAGEV YQAN FLDKNKDYVVAEHQALLTA+ C F
Sbjct: 535 LYQTFKNNKRFIKPKLSRTDFTISHYAGEVNYQANLFLDKNKDYVVAEHQALLTASNCPF 594
Query: 546 VAGLFPPLPEESSKSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFEN 605
V LFP EE+SKSSKFSSIGSRFKLQLQSLMETL+AT PHYIRCVKPNNVLKP+IFEN
Sbjct: 595 VVSLFPAQSEETSKSSKFSSIGSRFKLQLQSLMETLSATEPHYIRCVKPNNVLKPAIFEN 654
Query: 606 FNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDK 665
N+IQQLRCGGVLEAIRISCAGYPTRRTFYEF++RFG+LAPEVLEGNYDD+ AC MILDK
Sbjct: 655 ANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPEVLEGNYDDKTACIMILDK 714
Query: 666 KGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVI 725
KGLKGYQ+GKTKVFLRAGQMAELDARRAEVLGNAAR IQRQ RTYIARKEFI LR AA+
Sbjct: 715 KGLKGYQVGKTKVFLRAGQMAELDARRAEVLGNAARTIQRQIRTYIARKEFISLRKAAIQ 774
Query: 726 LQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARN 785
+QS+ RG MA KLYEQLRREAAALKIQ NFR Y+A++SYLTVRSSA+ LQTGLRAM ARN
Sbjct: 775 MQSYWRGRMACKLYEQLRREAAALKIQKNFRRYIARKSYLTVRSSAITLQTGLRAMTARN 834
Query: 786 EFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARET 845
EFR RK+TKAAII QA WRCHQAYSYYK LQ+AIIV+QC WRCRVARRELRKLKMAARET
Sbjct: 835 EFRFRKQTKAAIIIQAHWRCHQAYSYYKSLQKAIIVTQCSWRCRVARRELRKLKMAARET 894
Query: 846 GALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEAKSQEIAKLQEALHAMQLRVDDANSLV 905
GAL+EAK+KLEKRVEELTWRLQ+EKRLR DLEEAK+QE AKLQE LHAMQL++++AN +V
Sbjct: 895 GALKEAKDKLEKRVEELTWRLQLEKRLRVDLEEAKAQETAKLQETLHAMQLQIEEANVMV 954
Query: 906 IKEREAARKAIKEAPPVIKETPVIIQDTEKINSLTAEVENLKGLLQSQTQTADEAKQAFT 965
I+EREAARKAI+EAPPVIKETPVI+QDTEK++SLTAEVE LK L SQTQ A+EAKQA
Sbjct: 955 IREREAARKAIEEAPPVIKETPVIVQDTEKVDSLTAEVERLKASLLSQTQAAEEAKQACA 1014
Query: 966 VSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQALAISPTAKALAA 1025
++A+N ELT KL DAEK+VD+LQDSVQRL EK+SNLESENQVLRQQALAISPTAKAL+A
Sbjct: 1015 AAQAQNEELTTKLGDAEKKVDQLQDSVQRLEEKLSNLESENQVLRQQALAISPTAKALSA 1074
Query: 1026 RPKTTIIQRTPVNGNILNGEMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIK 1085
RPKT I+QRTP NGN+LNGE KK DS L + R+ E E +PQK+LNEKQQENQDLLIK
Sbjct: 1075 RPKTPILQRTPENGNVLNGEAKKQLDSSLALSSPREPESEEKPQKSLNEKQQENQDLLIK 1134
Query: 1086 CISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYW 1145
CISQDLGFSGG+P+AACLIYK LL WRSFEVERTS+FDRIIQTI AIEV DNND LSYW
Sbjct: 1135 CISQDLGFSGGRPIAACLIYKSLLQWRSFEVERTSVFDRIIQTIGAAIEVQDNNDVLSYW 1194
Query: 1146 LSNASTLLLLLQRTLKASGAASLTPQRRRSTSSSLLGRMSQGLRASPQSAGIPFLNSRIL 1205
L N+STLLLLLQRTLKASGAASLTPQRRRSTS+SL GRMSQGLRASPQSAG FLN R+L
Sbjct: 1195 LCNSSTLLLLLQRTLKASGAASLTPQRRRSTSASLFGRMSQGLRASPQSAGFSFLNGRVL 1254
Query: 1206 SGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLI 1265
GLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASL+
Sbjct: 1255 GGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLV 1314
Query: 1266 KGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNS 1325
KGRSQANAVAQQALIAHWQSIVKSLN YLKIM+AN+VP FL+RKVFTQIFSFINVQLFNS
Sbjct: 1315 KGRSQANAVAQQALIAHWQSIVKSLNYYLKIMKANHVPPFLVRKVFTQIFSFINVQLFNS 1374
Query: 1326 LLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKK 1385
LLLRRECCSFSNGEFVK GLAELE WCH++TEE+AGSAWDELRHIRQAVGFLVIHQKPKK
Sbjct: 1375 LLLRRECCSFSNGEFVKTGLAELENWCHEATEEYAGSAWDELRHIRQAVGFLVIHQKPKK 1434
Query: 1386 TLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDESNNAVSSSFL 1445
TLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSS+VISSMRVMM ++SNNAVSSSFL
Sbjct: 1435 TLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSNNAVSSSFL 1494
Query: 1446 LDDDSSIPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFLLQRSE 1491
LDDDSSIPFTVDDISK++QQIE++DIDPPPLIRENSGF+FLL R+E
Sbjct: 1495 LDDDSSIPFTVDDISKTMQQIEVSDIDPPPLIRENSGFSFLLPRAE 1540
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743058|emb|CBI35925.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255546055|ref|XP_002514087.1| myosin XI, putative [Ricinus communis] gi|223546543|gb|EEF48041.1| myosin XI, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224128654|ref|XP_002329057.1| predicted protein [Populus trichocarpa] gi|222839728|gb|EEE78051.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224091182|ref|XP_002309201.1| predicted protein [Populus trichocarpa] gi|222855177|gb|EEE92724.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|56201391|dbj|BAD72949.1| myosin XI [Nicotiana tabacum] | Back alignment and taxonomy information |
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| >gi|297738619|emb|CBI27864.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|116047947|gb|ABJ53199.1| myosin XI-K [Nicotiana benthamiana] | Back alignment and taxonomy information |
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| >gi|359484294|ref|XP_002279028.2| PREDICTED: myosin-Vb-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449452532|ref|XP_004144013.1| PREDICTED: unconventional myosin-Va-like [Cucumis sativus] gi|449500463|ref|XP_004161103.1| PREDICTED: unconventional myosin-Va-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1491 | ||||||
| TAIR|locus:2149932 | 1545 | XIK [Arabidopsis thaliana (tax | 0.994 | 0.959 | 0.759 | 0.0 | |
| TAIR|locus:2007938 | 1520 | MYA1 "myosin 1" [Arabidopsis t | 0.987 | 0.969 | 0.739 | 0.0 | |
| TAIR|locus:2025535 | 1538 | XIC [Arabidopsis thaliana (tax | 0.995 | 0.965 | 0.696 | 0.0 | |
| TAIR|locus:2199449 | 1529 | XIE [Arabidopsis thaliana (tax | 0.992 | 0.967 | 0.692 | 0.0 | |
| TAIR|locus:2117768 | 1516 | XIH [Arabidopsis thaliana (tax | 0.983 | 0.967 | 0.578 | 0.0 | |
| TAIR|locus:2045198 | 1556 | XIF "myosin-like protein XIF" | 0.739 | 0.708 | 0.620 | 0.0 | |
| TAIR|locus:2020270 | 1500 | XIB "myosin XI B" [Arabidopsis | 0.693 | 0.689 | 0.649 | 0.0 | |
| TAIR|locus:2039007 | 1493 | XIG "myosin-like protein XIG" | 0.768 | 0.767 | 0.596 | 0.0 | |
| TAIR|locus:2197773 | 1730 | XIA "myosin XI A" [Arabidopsis | 0.668 | 0.575 | 0.631 | 0.0 | |
| TAIR|locus:2125929 | 1522 | XI-I [Arabidopsis thaliana (ta | 0.771 | 0.755 | 0.556 | 0.0 |
| TAIR|locus:2149932 XIK [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 5843 (2061.9 bits), Expect = 0., P = 0.
Identities = 1129/1486 (75%), Positives = 1280/1486 (86%)
Query: 6 VVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNP 65
VV +++ VFP+DTEAP GGVDDMTKLSYLHEPGVL NLA RYELNEIYTYTGNILIAVNP
Sbjct: 59 VVANIANVFPKDTEAPPGGVDDMTKLSYLHEPGVLNNLAMRYELNEIYTYTGNILIAVNP 118
Query: 66 FQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTE 125
FQRLPHLYDTHMMEQYKGA FGELSPHVFA+ + AYRAMINEGKSNSILVSGESGAGKTE
Sbjct: 119 FQRLPHLYDTHMMEQYKGAGFGELSPHVFAIAEVAYRAMINEGKSNSILVSGESGAGKTE 178
Query: 126 TTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFD 185
TTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKT+RNNNSSRFGKFVE+QFD
Sbjct: 179 TTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFD 238
Query: 186 KNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQ 245
GRISGAA+RTYLLERSRVCQISDPERNYHCFYLLCAAP E+ K+KLG PK FHYLNQ
Sbjct: 239 NCGRISGAAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEEREKFKLGDPKLFHYLNQ 298
Query: 246 SNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSV 305
S CY+LDGV D EYLATRRAMDIVGIS++EQ+AIFRVVAAILHLGN++FAKGKEIDSSV
Sbjct: 299 SKCYKLDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNVNFAKGKEIDSSV 358
Query: 306 IKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTI 365
+KDEKSR+HL++ AELLRCDA+ +EDALIKRVMVTPEEVITRTLDP +A SRDALAKTI
Sbjct: 359 LKDEKSRYHLDVCAELLRCDAKKMEDALIKRVMVTPEEVITRTLDPDSATGSRDALAKTI 418
Query: 366 YSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQ 425
YSRLFDW+V+KIN SIGQDP+SK+IIGVLDIYGFESFK NSFEQFCINFTNEKLQQHFNQ
Sbjct: 419 YSRLFDWLVDKINNSIGQDPNSKTIIGVLDIYGFESFKINSFEQFCINFTNEKLQQHFNQ 478
Query: 426 HVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQK 485
HVFKMEQE+YT+EEINWSYIEF+DN+DVL+LIEKKPGG+IALLDEACMFPKSTHETF+QK
Sbjct: 479 HVFKMEQEDYTKEEINWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQK 538
Query: 486 LCQTFAKNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSF 545
L QTF RF+KPKLSRT F I HYAGEVTYQA+ FLDKNKDYVVAEHQ LL A+ +F
Sbjct: 539 LYQTFKNYKRFTKPKLSRTSFAISHYAGEVTYQADLFLDKNKDYVVAEHQDLLIASSDTF 598
Query: 546 VAGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFEN 605
VAG IGSRFKLQLQSLMETL++T PHYIRCVKPNNVLKP+IFEN
Sbjct: 599 VAGLFPRLPEETSSKTKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFEN 658
Query: 606 FNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDK 665
NVIQQLRCGGVLEAIRISCAGYPT+RTFYEF+NRFG+LAPEVLEGNYDD+VAC+M+LDK
Sbjct: 659 VNVIQQLRCGGVLEAIRISCAGYPTKRTFYEFLNRFGVLAPEVLEGNYDDKVACKMLLDK 718
Query: 666 KGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVI 725
GLKGY++GKTKVFLRAGQMAELDARRAEVLGNAAR+IQRQ+RT+IA KEF LR AA++
Sbjct: 719 IGLKGYELGKTKVFLRAGQMAELDARRAEVLGNAARRIQRQSRTFIACKEFRALRGAAIV 778
Query: 726 LQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARN 785
LQS RG++A LYE++RR+AAA+KIQ FR ++A+ SYL +R S + +QT LR MVARN
Sbjct: 779 LQSNCRGKLACNLYEEMRRQAAAVKIQKIFRRHIARESYLRIRHSTITVQTALRGMVARN 838
Query: 786 EFRLRKRTKAAIIAQAQWRCHQAYSYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARET 845
EFR RK+ KAA I QA+ R H +SYYK+LQ+A + +QCGWR RVAR+ELR LKMAAR+T
Sbjct: 839 EFRFRKQMKAATIIQARLRSHLTHSYYKQLQKAALSTQCGWRSRVARKELRTLKMAARDT 898
Query: 846 GALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEAKSQEIAKLQEALHAMQLRVDDANSLV 905
GAL+EAK+KLEKRVEELTWRLQ+EKR RT+LEEAK+QE AK QEAL M+L+V++AN+ V
Sbjct: 899 GALREAKDKLEKRVEELTWRLQLEKRQRTELEEAKTQEYAKQQEALETMRLQVEEANAAV 958
Query: 906 XXXXXXXXXXXXXXPPVIKETPVIIQDTEKINSLTAEVENLKGLLQSQTQTADEAKQAFT 965
PPVIKETPV+++DTEKINSLT+EVE LK LQ++ Q A+ ++AF+
Sbjct: 959 IREREAARKAIEEAPPVIKETPVLVEDTEKINSLTSEVEALKASLQAERQAAENLRKAFS 1018
Query: 966 VSEAKNGELTKKLKDAEKRVDELQDSVQRLAEKVSNLESENQVLRQQALAISPTAKALAA 1025
+EA+N EL +L++A ++ D+L +SVQRL EK+SN ESE QVLRQQALAISPT++ +A
Sbjct: 1019 EAEARNSELATELENATRKADQLHESVQRLEEKLSNSESEIQVLRQQALAISPTSRTMAT 1078
Query: 1026 RPKTTIIQRTPVNGNILNGEMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIK 1085
R KT ++ RTP NGN LNG K D L V R+ E E +PQK LNEKQQENQDLL+K
Sbjct: 1079 RSKTMLLPRTPENGNYLNGGTKTTPDMTLAV---REPESEEKPQKHLNEKQQENQDLLVK 1135
Query: 1086 CISQDLGFSGGKPVAACLIYKCLLHWRSFEVERTSIFDRIIQTISGAIEVHDNNDRLSYW 1145
CISQ+LG++G KPVAAC+IYKCLLHWRSFEVERTS+FDRIIQTI+ AIEV DNN+ L+YW
Sbjct: 1136 CISQNLGYNGDKPVAACVIYKCLLHWRSFEVERTSVFDRIIQTIATAIEVPDNNEVLAYW 1195
Query: 1146 LSNASTXXXXXQRTLKASGAAXXXXXXXXXXXXXXXXXXXQGLRASPQSAGIPFLNSRIL 1205
LSN++T QRTLKA+GAA QGLR SPQSAG+ FLN + L
Sbjct: 1196 LSNSATLLLLLQRTLKATGAASLTPQRRRTTSASLFGRMSQGLRGSPQSAGLSFLNRQGL 1255
Query: 1206 SGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLI 1265
+ LDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASL+
Sbjct: 1256 TKLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLV 1315
Query: 1266 KGRSQANAVAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNS 1325
KGR+QANAVAQQALIAHWQSI KSLN+YL +M+AN P FL+RKVFTQIFSFINVQLFNS
Sbjct: 1316 KGRAQANAVAQQALIAHWQSIRKSLNSYLNLMKANNAPPFLVRKVFTQIFSFINVQLFNS 1375
Query: 1326 LLLRRECCSFSNGEFVKAGLAELEQWCHDSTEEFAGSAWDELRHIRQAVGFLVIHQKPKK 1385
LLLRRECCSFSNGE+VKAGLAELEQWC ++T+E+AGSAWDELRHIRQAVGFLVIHQKPKK
Sbjct: 1376 LLLRRECCSFSNGEYVKAGLAELEQWCIEATDEYAGSAWDELRHIRQAVGFLVIHQKPKK 1435
Query: 1386 TLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMMDESNNAVXXXXX 1445
TL EIT +LCPVLSIQQLYRISTMYWDDKYGTHSVSS+VI++MRVMM ++SNNAV
Sbjct: 1436 TLDEITRELCPVLSIQQLYRISTMYWDDKYGTHSVSSDVIANMRVMMTEDSNNAVSSSFL 1495
Query: 1446 XXXXXXIPFTVDDISKSIQQIEIADIDPPPLIRENSGFTFLLQRSE 1491
IPFTV+DISKS+QQ+++ DI+PP LIRENSGF FLL R E
Sbjct: 1496 LDDDSSIPFTVEDISKSMQQVDVNDIEPPQLIRENSGFGFLLTRKE 1541
|
|
| TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025535 XIC [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2199449 XIE [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117768 XIH [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2045198 XIF "myosin-like protein XIF" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2020270 XIB "myosin XI B" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2039007 XIG "myosin-like protein XIG" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2197773 XIA "myosin XI A" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2125929 XI-I [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1491 | |||
| cd01384 | 674 | cd01384, MYSc_type_XI, Myosin motor domain, plant- | 0.0 | |
| smart00242 | 677 | smart00242, MYSc, Myosin | 0.0 | |
| cd00124 | 679 | cd00124, MYSc, Myosin motor domain | 0.0 | |
| COG5022 | 1463 | COG5022, COG5022, Myosin heavy chain [Cytoskeleton | 0.0 | |
| pfam00063 | 679 | pfam00063, Myosin_head, Myosin head (motor domain) | 0.0 | |
| cd01380 | 691 | cd01380, MYSc_type_V, Myosin motor domain, type V | 0.0 | |
| cd01377 | 693 | cd01377, MYSc_type_II, Myosin motor domain, type I | 0.0 | |
| cd01378 | 674 | cd01378, MYSc_type_I, Myosin motor domain, type I | 0.0 | |
| cd01381 | 671 | cd01381, MYSc_type_VII, Myosin motor domain, type | 0.0 | |
| cd01383 | 677 | cd01383, MYSc_type_VIII, Myosin motor domain, plan | 0.0 | |
| cd01382 | 717 | cd01382, MYSc_type_VI, Myosin motor domain, type V | 0.0 | |
| cd01387 | 677 | cd01387, MYSc_type_XV, Myosin motor domain, type X | 0.0 | |
| cd01385 | 692 | cd01385, MYSc_type_IX, Myosin motor domain, type I | 1e-174 | |
| PTZ00014 | 821 | PTZ00014, PTZ00014, myosin-A; Provisional | 1e-160 | |
| cd01379 | 653 | cd01379, MYSc_type_III, Myosin motor domain, type | 1e-160 | |
| cd01386 | 767 | cd01386, MYSc_type_XVIII, Myosin motor domain, typ | 1e-69 | |
| pfam01843 | 105 | pfam01843, DIL, DIL domain | 1e-40 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 5e-08 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-07 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 8e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 9e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 1e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-05 | |
| TIGR04211 | 198 | TIGR04211, SH3_and_anchor, SH3 domain protein | 2e-05 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-04 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 2e-04 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 3e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-04 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 8e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.001 | |
| pfam06160 | 559 | pfam06160, EzrA, Septation ring formation regulato | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.002 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 0.003 | |
| pfam09731 | 493 | pfam09731, Mitofilin, Mitochondrial inner membrane | 0.003 |
| >gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
Score = 1450 bits (3756), Expect = 0.0
Identities = 586/674 (86%), Positives = 622/674 (92%)
Query: 23 GGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYK 82
GVDDMTKLSYLHEPGVLQNL TRYELNEIYTYTGNILIAVNPFQRLPHLYD HMMEQYK
Sbjct: 1 EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYK 60
Query: 83 GAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSG 142
GAA GELSPHVFA+ DAAYRAMINEGKS SILVSGESGAGKTETTKMLMRYLAY+GGR+G
Sbjct: 61 GAALGELSPHVFAIADAAYRAMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAG 120
Query: 143 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLER 202
VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFD GRISGAAIRTYLLER
Sbjct: 121 VEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDDYGRISGAAIRTYLLER 180
Query: 203 SRVCQISDPERNYHCFYLLCAAPHEDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEYLA 262
SRVCQISDPERNYHCFY LCAAP ED+ KYKLG PK FHYLNQSNC+ELDGV DA EYLA
Sbjct: 181 SRVCQISDPERNYHCFYQLCAAPPEDVKKYKLGDPKEFHYLNQSNCFELDGVDDAEEYLA 240
Query: 263 TRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELL 322
TRRAMD+VGIS++EQ+AIFRVVAAILHLGNI+FAKG+EIDSSV+KDEKS FHL AELL
Sbjct: 241 TRRAMDVVGISEEEQDAIFRVVAAILHLGNIEFAKGEEIDSSVLKDEKSEFHLKTAAELL 300
Query: 323 RCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIG 382
CD ++LEDAL KRVMVTPEEVIT+ LDP +A SRDALAKTIYSRLFDW+V KIN SIG
Sbjct: 301 MCDEKALEDALCKRVMVTPEEVITKPLDPDSAELSRDALAKTIYSRLFDWLVNKINSSIG 360
Query: 383 QDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTREEINW 442
QDPDSKS+IGVLDIYGFESFK NSFEQFCIN TNEKLQQHFNQHVFKMEQEEYT+EEI+W
Sbjct: 361 QDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDW 420
Query: 443 SYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAKNNRFSKPKLS 502
SYIEF+DNQDVLDLIEKKPGGIIALLDEACMFPKSTHETF+QKL QTF + RF KPKLS
Sbjct: 421 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKDHKRFEKPKLS 480
Query: 503 RTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSK 562
RT FTI HYAG+VTYQ + FLDKNKDYVVAEHQALL A+ CSFVAGLFPPLPEE+SKSSK
Sbjct: 481 RTAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKSSK 540
Query: 563 FSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIR 622
FSSIGSRFK QLQSLMETL+ T PHYIRC+KPNNVLKP IFEN NV+QQLRCGGVLEAIR
Sbjct: 541 FSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIR 600
Query: 623 ISCAGYPTRRTFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGLKGYQIGKTKVFLRA 682
ISCAGYPTRRTF EF++RFGILAPEVL+G+ DD+ AC+ ILDK GLKGYQIGKTKVFLRA
Sbjct: 601 ISCAGYPTRRTFDEFLDRFGILAPEVLKGSSDDKAACKKILDKMGLKGYQIGKTKVFLRA 660
Query: 683 GQMAELDARRAEVL 696
GQMAELDARR EVL
Sbjct: 661 GQMAELDARRTEVL 674
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 674 |
| >gnl|CDD|214580 smart00242, MYSc, Myosin | Back alignment and domain information |
|---|
| >gnl|CDD|238071 cd00124, MYSc, Myosin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) | Back alignment and domain information |
|---|
| >gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >gnl|CDD|216736 pfam01843, DIL, DIL domain | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|114855 pfam06160, EzrA, Septation ring formation regulator, EzrA | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|220369 pfam09731, Mitofilin, Mitochondrial inner membrane protein | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1491 | |||
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 100.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 100.0 | |
| cd01384 | 674 | MYSc_type_XI Myosin motor domain, plant-specific t | 100.0 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 100.0 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd01380 | 691 | MYSc_type_V Myosin motor domain, type V myosins. M | 100.0 | |
| cd01381 | 671 | MYSc_type_VII Myosin motor domain, type VII myosin | 100.0 | |
| cd01377 | 693 | MYSc_type_II Myosin motor domain, type II myosins. | 100.0 | |
| cd01378 | 674 | MYSc_type_I Myosin motor domain, type I myosins. M | 100.0 | |
| cd01383 | 677 | MYSc_type_VIII Myosin motor domain, plant-specific | 100.0 | |
| cd01387 | 677 | MYSc_type_XV Myosin motor domain, type XV myosins. | 100.0 | |
| cd01385 | 692 | MYSc_type_IX Myosin motor domain, type IX myosins. | 100.0 | |
| cd01382 | 717 | MYSc_type_VI Myosin motor domain, type VI myosins. | 100.0 | |
| cd01379 | 653 | MYSc_type_III Myosin motor domain, type III myosin | 100.0 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 100.0 | |
| smart00242 | 677 | MYSc Myosin. Large ATPases. ATPase; molecular moto | 100.0 | |
| KOG0162 | 1106 | consensus Myosin class I heavy chain [Cytoskeleton | 100.0 | |
| cd00124 | 679 | MYSc Myosin motor domain. This catalytic (head) do | 100.0 | |
| cd01386 | 767 | MYSc_type_XVIII Myosin motor domain, type XVIII my | 100.0 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 100.0 | |
| PF00063 | 689 | Myosin_head: Myosin head (motor domain); InterPro: | 100.0 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 100.0 | |
| KOG1892 | 1629 | consensus Actin filament-binding protein Afadin [C | 99.96 | |
| PF01843 | 105 | DIL: DIL domain; InterPro: IPR018444 Dilute encode | 99.94 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 99.4 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 98.62 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 98.51 | |
| KOG0160 | 862 | consensus Myosin class V heavy chain [Cytoskeleton | 98.42 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.42 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.11 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.71 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 97.68 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 97.63 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.4 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 97.35 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 97.31 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.31 | |
| KOG0164 | 1001 | consensus Myosin class I heavy chain [Cytoskeleton | 97.14 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 97.12 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.1 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.09 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 97.04 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 97.02 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.92 | |
| KOG4229 | 1062 | consensus Myosin VII, myosin IXB and related myosi | 96.92 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 96.9 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 96.86 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.85 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.85 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 96.83 | |
| KOG2128 | 1401 | consensus Ras GTPase-activating protein family - I | 96.82 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.82 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 96.79 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.78 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 96.76 | |
| PF00612 | 21 | IQ: IQ calmodulin-binding motif; InterPro: IPR0000 | 96.63 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.57 | |
| PRK09039 | 343 | hypothetical protein; Validated | 96.53 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.52 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.42 | |
| KOG0163 | 1259 | consensus Myosin class VI heavy chain [Cytoskeleto | 96.38 | |
| PRK09039 | 343 | hypothetical protein; Validated | 96.38 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 96.33 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.33 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 96.32 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 96.29 | |
| KOG0925 | 699 | consensus mRNA splicing factor ATP-dependent RNA h | 96.27 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 96.23 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 96.23 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 96.21 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 96.19 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 96.16 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 96.14 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 96.11 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 96.06 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.05 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 96.01 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 96.0 | |
| PTZ00014 | 821 | myosin-A; Provisional | 95.98 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 95.9 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 95.88 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 95.83 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 95.82 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 95.82 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 95.79 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 95.74 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 95.74 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 95.73 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 95.69 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 95.65 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 95.62 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.6 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 95.6 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 95.56 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 95.55 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 95.49 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 95.42 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 95.4 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 95.4 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 95.36 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 95.32 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 95.26 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 95.24 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 95.2 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 95.2 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 95.14 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 95.11 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 95.06 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.04 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 95.03 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 95.01 | |
| smart00015 | 26 | IQ Short calmodulin-binding motif containing conse | 94.9 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 94.89 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 94.86 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 94.85 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 94.79 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 94.78 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 94.78 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 94.75 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 94.74 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 94.72 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 94.71 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 94.58 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 94.55 | |
| PF13207 | 121 | AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 | 94.52 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 94.44 | |
| PRK01156 | 895 | chromosome segregation protein; Provisional | 94.38 | |
| PF10473 | 140 | CENP-F_leu_zip: Leucine-rich repeats of kinetochor | 94.35 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 94.22 | |
| PF04091 | 311 | Sec15: Exocyst complex subunit Sec15-like ; InterP | 94.18 | |
| PF04156 | 191 | IncA: IncA protein; InterPro: IPR007285 Chlamydia | 94.18 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 94.16 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 94.15 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 94.09 | |
| KOG2991 | 330 | consensus Splicing regulator [RNA processing and m | 94.01 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 93.97 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 93.94 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 93.92 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 93.9 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 93.84 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 93.77 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 93.73 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 93.7 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.69 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 93.6 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 93.57 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 93.5 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 93.44 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 93.44 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 93.24 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 93.2 | |
| PF13401 | 131 | AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S | 93.2 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 93.18 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 93.03 | |
| PF13238 | 129 | AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB | 92.86 | |
| PTZ00121 | 2084 | MAEBL; Provisional | 92.79 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 92.76 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 92.69 | |
| KOG0963 | 629 | consensus Transcription factor/CCAAT displacement | 92.65 | |
| cd02019 | 69 | NK Nucleoside/nucleotide kinase (NK) is a protein | 92.58 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 92.57 | |
| PF13191 | 185 | AAA_16: AAA ATPase domain; PDB: 2V1U_A. | 92.48 | |
| TIGR02322 | 179 | phosphon_PhnN phosphonate metabolism protein/1,5-b | 92.46 | |
| PF14915 | 305 | CCDC144C: CCDC144C protein coiled-coil region | 92.38 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 92.32 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 92.24 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 92.23 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 92.22 | |
| COG0444 | 316 | DppD ABC-type dipeptide/oligopeptide/nickel transp | 92.19 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 92.11 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 91.97 | |
| PRK06696 | 223 | uridine kinase; Validated | 91.77 | |
| TIGR03015 | 269 | pepcterm_ATPase putative secretion ATPase, PEP-CTE | 91.76 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 91.7 | |
| COG0419 | 908 | SbcC ATPase involved in DNA repair [DNA replicatio | 91.66 | |
| PRK09270 | 229 | nucleoside triphosphate hydrolase domain-containin | 91.66 | |
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 91.65 | |
| TIGR00150 | 133 | HI0065_YjeE ATPase, YjeE family. Members of this f | 91.62 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 91.54 | |
| cd00820 | 107 | PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC | 91.52 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 91.49 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 91.49 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 91.44 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 91.4 | |
| PF01583 | 156 | APS_kinase: Adenylylsulphate kinase; InterPro: IPR | 91.38 | |
| cd01918 | 149 | HprK_C HprK/P, the bifunctional histidine-containi | 91.38 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 91.35 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 91.33 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 91.33 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 91.3 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 91.29 | |
| PRK05480 | 209 | uridine/cytidine kinase; Provisional | 91.26 | |
| PRK13833 | 323 | conjugal transfer protein TrbB; Provisional | 91.24 | |
| cd01131 | 198 | PilT Pilus retraction ATPase PilT. PilT is a nucle | 91.23 | |
| PF00004 | 132 | AAA: ATPase family associated with various cellula | 91.21 | |
| PRK00300 | 205 | gmk guanylate kinase; Provisional | 91.14 | |
| COG0194 | 191 | Gmk Guanylate kinase [Nucleotide transport and met | 91.1 | |
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 91.1 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 91.08 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 91.05 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 91.01 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 90.98 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 90.88 | |
| PF00485 | 194 | PRK: Phosphoribulokinase / Uridine kinase family; | 90.87 | |
| PHA02544 | 316 | 44 clamp loader, small subunit; Provisional | 90.87 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 90.86 | |
| cd02023 | 198 | UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. | 90.84 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 90.81 | |
| cd01129 | 264 | PulE-GspE PulE/GspE The type II secretory pathway | 90.79 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 90.7 | |
| PRK12402 | 337 | replication factor C small subunit 2; Reviewed | 90.65 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 90.65 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 90.63 | |
| PRK10698 | 222 | phage shock protein PspA; Provisional | 90.61 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 90.54 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 90.42 | |
| TIGR00235 | 207 | udk uridine kinase. Model contains a number of lon | 90.39 | |
| PRK05541 | 176 | adenylylsulfate kinase; Provisional | 90.38 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 90.3 | |
| smart00382 | 148 | AAA ATPases associated with a variety of cellular | 90.19 | |
| PRK08233 | 182 | hypothetical protein; Provisional | 90.19 | |
| PTZ00301 | 210 | uridine kinase; Provisional | 90.17 | |
| PRK06762 | 166 | hypothetical protein; Provisional | 90.12 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 90.06 | |
| KOG0978 | 698 | consensus E3 ubiquitin ligase involved in syntaxin | 90.05 | |
| PRK07261 | 171 | topology modulation protein; Provisional | 90.05 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 89.9 | |
| PRK06547 | 172 | hypothetical protein; Provisional | 89.86 | |
| PRK14961 | 363 | DNA polymerase III subunits gamma and tau; Provisi | 89.86 | |
| TIGR02173 | 171 | cyt_kin_arch cytidylate kinase, putative. Proteins | 89.85 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 89.78 | |
| cd02020 | 147 | CMPK Cytidine monophosphate kinase (CMPK) catalyze | 89.77 | |
| cd02028 | 179 | UMPK_like Uridine monophosphate kinase_like (UMPK_ | 89.72 | |
| cd00227 | 175 | CPT Chloramphenicol (Cm) phosphotransferase (CPT). | 89.71 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 89.69 | |
| COG1660 | 286 | Predicted P-loop-containing kinase [General functi | 89.69 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 89.67 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 89.65 | |
| TIGR02782 | 299 | TrbB_P P-type conjugative transfer ATPase TrbB. Th | 89.55 | |
| PRK08118 | 167 | topology modulation protein; Reviewed | 89.45 | |
| KOG1003 | 205 | consensus Actin filament-coating protein tropomyos | 89.37 | |
| PF08826 | 61 | DMPK_coil: DMPK coiled coil domain like; InterPro: | 89.36 | |
| PRK00131 | 175 | aroK shikimate kinase; Reviewed | 89.34 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 89.29 | |
| cd02025 | 220 | PanK Pantothenate kinase (PanK) catalyzes the phos | 89.28 | |
| PF03668 | 284 | ATP_bind_2: P-loop ATPase protein family; InterPro | 89.14 | |
| PLN03025 | 319 | replication factor C subunit; Provisional | 89.14 | |
| PF07724 | 171 | AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR | 89.07 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 89.06 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 89.04 | |
| PRK10078 | 186 | ribose 1,5-bisphosphokinase; Provisional | 89.0 | |
| KOG0018 | 1141 | consensus Structural maintenance of chromosome pro | 88.98 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 88.94 | |
| PF10186 | 302 | Atg14: UV radiation resistance protein and autopha | 88.93 | |
| cd01130 | 186 | VirB11-like_ATPase Type IV secretory pathway compo | 88.9 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 88.87 | |
| PRK14737 | 186 | gmk guanylate kinase; Provisional | 88.86 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 88.74 | |
| cd00071 | 137 | GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. | 88.73 | |
| PF00910 | 107 | RNA_helicase: RNA helicase; InterPro: IPR000605 He | 88.73 | |
| TIGR01313 | 163 | therm_gnt_kin carbohydrate kinase, thermoresistant | 88.7 | |
| PRK00889 | 175 | adenylylsulfate kinase; Provisional | 88.57 | |
| cd02024 | 187 | NRK1 Nicotinamide riboside kinase (NRK) is an enzy | 88.49 | |
| TIGR00554 | 290 | panK_bact pantothenate kinase, bacterial type. Sho | 88.49 | |
| PF13245 | 76 | AAA_19: Part of AAA domain | 88.47 | |
| PF04437 | 494 | RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 | 88.4 | |
| PF05729 | 166 | NACHT: NACHT domain | 88.33 | |
| PRK13851 | 344 | type IV secretion system protein VirB11; Provision | 88.25 | |
| COG4608 | 268 | AppF ABC-type oligopeptide transport system, ATPas | 88.24 | |
| PF12846 | 304 | AAA_10: AAA-like domain | 87.99 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 87.99 | |
| COG1102 | 179 | Cmk Cytidylate kinase [Nucleotide transport and me | 87.98 | |
| TIGR01420 | 343 | pilT_fam pilus retraction protein PilT. This model | 87.98 | |
| PRK12377 | 248 | putative replication protein; Provisional | 87.93 | |
| cd02027 | 149 | APSK Adenosine 5'-phosphosulfate kinase (APSK) cat | 87.91 | |
| TIGR02524 | 358 | dot_icm_DotB Dot/Icm secretion system ATPase DotB. | 87.9 | |
| TIGR02977 | 219 | phageshock_pspA phage shock protein A. Members of | 87.86 | |
| PF10205 | 102 | KLRAQ: Predicted coiled-coil domain-containing pro | 87.84 | |
| PRK14956 | 484 | DNA polymerase III subunits gamma and tau; Provisi | 87.83 | |
| PRK14738 | 206 | gmk guanylate kinase; Provisional | 87.82 | |
| TIGR03263 | 180 | guanyl_kin guanylate kinase. Members of this famil | 87.78 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 87.74 | |
| PRK13900 | 332 | type IV secretion system ATPase VirB11; Provisiona | 87.69 | |
| PRK06217 | 183 | hypothetical protein; Validated | 87.66 | |
| PF13671 | 143 | AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 | 87.66 | |
| PRK00440 | 319 | rfc replication factor C small subunit; Reviewed | 87.6 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 87.54 | |
| KOG4403 | 575 | consensus Cell surface glycoprotein STIM, contains | 87.47 | |
| PF12777 | 344 | MT: Microtubule-binding stalk of dynein motor; Int | 87.47 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 87.47 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 87.44 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 87.35 | |
| PF09304 | 107 | Cortex-I_coil: Cortexillin I, coiled coil; InterPr | 87.27 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 87.26 | |
| COG0529 | 197 | CysC Adenylylsulfate kinase and related kinases [I | 87.18 | |
| PRK09111 | 598 | DNA polymerase III subunits gamma and tau; Validat | 87.18 | |
| PRK03846 | 198 | adenylylsulfate kinase; Provisional | 87.13 | |
| TIGR02525 | 372 | plasmid_TraJ plasmid transfer ATPase TraJ. Members | 87.1 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 87.04 | |
| cd00464 | 154 | SK Shikimate kinase (SK) is the fifth enzyme in th | 86.97 | |
| PRK10751 | 173 | molybdopterin-guanine dinucleotide biosynthesis pr | 86.84 | |
| PRK12704 | 520 | phosphodiesterase; Provisional | 86.83 | |
| COG0572 | 218 | Udk Uridine kinase [Nucleotide transport and metab | 86.67 | |
| KOG4593 | 716 | consensus Mitotic checkpoint protein MAD1 [Cell cy | 86.65 | |
| PF00437 | 270 | T2SE: Type II/IV secretion system protein; InterPr | 86.64 | |
| PRK06645 | 507 | DNA polymerase III subunits gamma and tau; Validat | 86.63 | |
| KOG4460 | 741 | consensus Nuclear pore complex, Nup88/rNup84 compo | 86.58 | |
| cd01120 | 165 | RecA-like_NTPases RecA-like NTPases. This family i | 86.55 | |
| PRK05896 | 605 | DNA polymerase III subunits gamma and tau; Validat | 86.48 | |
| PRK14964 | 491 | DNA polymerase III subunits gamma and tau; Provisi | 86.42 | |
| COG1125 | 309 | OpuBA ABC-type proline/glycine betaine transport s | 86.36 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 86.34 | |
| KOG4807 | 593 | consensus F-actin binding protein, regulates actin | 86.24 | |
| PF03205 | 140 | MobB: Molybdopterin guanine dinucleotide synthesis | 86.18 | |
| PF09738 | 302 | DUF2051: Double stranded RNA binding protein (DUF2 | 86.1 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 85.99 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 85.97 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 85.96 | |
| cd02021 | 150 | GntK Gluconate kinase (GntK) catalyzes the phospho | 85.89 | |
| PRK13764 | 602 | ATPase; Provisional | 85.84 | |
| TIGR02902 | 531 | spore_lonB ATP-dependent protease LonB. Members of | 85.81 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 85.8 | |
| PRK09825 | 176 | idnK D-gluconate kinase; Provisional | 85.79 | |
| PRK05057 | 172 | aroK shikimate kinase I; Reviewed | 85.79 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 85.77 | |
| KOG1103 | 561 | consensus Predicted coiled-coil protein [Function | 85.76 | |
| KOG4809 | 654 | consensus Rab6 GTPase-interacting protein involved | 85.76 | |
| PF03266 | 168 | NTPase_1: NTPase; InterPro: IPR004948 This entry r | 85.73 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 85.72 | |
| COG1124 | 252 | DppF ABC-type dipeptide/oligopeptide/nickel transp | 85.68 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 85.66 | |
| PF13514 | 1111 | AAA_27: AAA domain | 85.62 | |
| COG0563 | 178 | Adk Adenylate kinase and related kinases [Nucleoti | 85.61 | |
| PRK13342 | 413 | recombination factor protein RarA; Reviewed | 85.54 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 85.42 | |
| PF02367 | 123 | UPF0079: Uncharacterised P-loop hydrolase UPF0079; | 85.39 | |
| PHA00729 | 226 | NTP-binding motif containing protein | 85.32 | |
| TIGR01360 | 188 | aden_kin_iso1 adenylate kinase, isozyme 1 subfamil | 85.31 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 85.18 | |
| PF03962 | 188 | Mnd1: Mnd1 family; InterPro: IPR005647 This family | 85.17 | |
| TIGR02533 | 486 | type_II_gspE general secretory pathway protein E. | 85.16 | |
| PRK04182 | 180 | cytidylate kinase; Provisional | 85.15 | |
| PTZ00112 | 1164 | origin recognition complex 1 protein; Provisional | 85.15 | |
| PF07475 | 171 | Hpr_kinase_C: HPr Serine kinase C-terminal domain; | 85.08 | |
| PRK14955 | 397 | DNA polymerase III subunits gamma and tau; Provisi | 85.06 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 85.04 | |
| COG2884 | 223 | FtsE Predicted ATPase involved in cell division [C | 85.01 | |
| cd02029 | 277 | PRK_like Phosphoribulokinase-like (PRK-like) is a | 84.94 | |
| PF13555 | 62 | AAA_29: P-loop containing region of AAA domain | 84.93 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 84.81 | |
| PRK04040 | 188 | adenylate kinase; Provisional | 84.72 | |
| PF11559 | 151 | ADIP: Afadin- and alpha -actinin-Binding; InterPro | 84.71 | |
| PRK07667 | 193 | uridine kinase; Provisional | 84.71 | |
| PRK14527 | 191 | adenylate kinase; Provisional | 84.59 | |
| PRK08727 | 233 | hypothetical protein; Validated | 84.55 | |
| PRK14957 | 546 | DNA polymerase III subunits gamma and tau; Provisi | 84.45 | |
| PF03215 | 519 | Rad17: Rad17 cell cycle checkpoint protein | 84.44 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 84.41 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 84.35 | |
| COG4172 | 534 | ABC-type uncharacterized transport system, duplica | 84.35 | |
| KOG4403 | 575 | consensus Cell surface glycoprotein STIM, contains | 84.3 | |
| COG4477 | 570 | EzrA Negative regulator of septation ring formatio | 84.29 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 84.2 | |
| PRK05342 | 412 | clpX ATP-dependent protease ATP-binding subunit Cl | 84.18 | |
| KOG0249 | 916 | consensus LAR-interacting protein and related prot | 84.09 | |
| PRK15422 | 79 | septal ring assembly protein ZapB; Provisional | 84.01 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 83.94 | |
| PRK06761 | 282 | hypothetical protein; Provisional | 83.87 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 83.83 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 83.8 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 83.79 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 83.76 | |
| PRK13894 | 319 | conjugal transfer ATPase TrbB; Provisional | 83.68 | |
| cd03115 | 173 | SRP The signal recognition particle (SRP) mediates | 83.6 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 83.54 | |
| PF07728 | 139 | AAA_5: AAA domain (dynein-related subfamily); Inte | 83.47 | |
| COG3074 | 79 | Uncharacterized protein conserved in bacteria [Fun | 83.44 | |
| PRK05416 | 288 | glmZ(sRNA)-inactivating NTPase; Provisional | 83.36 | |
| PRK00106 | 535 | hypothetical protein; Provisional | 83.34 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 83.34 | |
| PRK15453 | 290 | phosphoribulokinase; Provisional | 83.31 | |
| PRK08356 | 195 | hypothetical protein; Provisional | 83.28 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 83.06 | |
| PRK08116 | 268 | hypothetical protein; Validated | 82.97 | |
| TIGR03499 | 282 | FlhF flagellar biosynthetic protein FlhF. | 82.94 | |
| cd02034 | 116 | CooC The accessory protein CooC, which contains a | 82.94 | |
| TIGR02903 | 615 | spore_lon_C ATP-dependent protease, Lon family. Me | 82.93 | |
| COG1382 | 119 | GimC Prefoldin, chaperonin cofactor [Posttranslati | 82.91 | |
| PRK14732 | 196 | coaE dephospho-CoA kinase; Provisional | 82.86 | |
| PRK04220 | 301 | 2-phosphoglycerate kinase; Provisional | 82.82 | |
| COG0802 | 149 | Predicted ATPase or kinase [General function predi | 82.81 | |
| TIGR00064 | 272 | ftsY signal recognition particle-docking protein F | 82.8 | |
| PRK14962 | 472 | DNA polymerase III subunits gamma and tau; Provisi | 82.79 | |
| TIGR00455 | 184 | apsK adenylylsulfate kinase (apsK). Important resi | 82.76 | |
| TIGR02881 | 261 | spore_V_K stage V sporulation protein K. Members o | 82.76 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 82.71 | |
| TIGR02868 | 529 | CydC thiol reductant ABC exporter, CydC subunit. T | 82.67 | |
| PRK00698 | 205 | tmk thymidylate kinase; Validated | 82.67 | |
| PRK11308 | 327 | dppF dipeptide transporter ATP-binding subunit; Pr | 82.63 | |
| PF04665 | 241 | Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 | 82.6 | |
| PRK15093 | 330 | antimicrobial peptide ABC transporter ATP-binding | 82.57 | |
| PRK14974 | 336 | cell division protein FtsY; Provisional | 82.52 | |
| KOG0056 | 790 | consensus Heavy metal exporter HMT1, ABC superfami | 82.48 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 82.46 | |
| cd03293 | 220 | ABC_NrtD_SsuB_transporters NrtD and SsuB are the A | 82.45 | |
| PF07106 | 169 | TBPIP: Tat binding protein 1(TBP-1)-interacting pr | 82.44 | |
| TIGR01359 | 183 | UMP_CMP_kin_fam UMP-CMP kinase family. This subfam | 82.44 | |
| TIGR00176 | 155 | mobB molybdopterin-guanine dinucleotide biosynthes | 82.41 | |
| PRK09112 | 351 | DNA polymerase III subunit delta'; Validated | 82.37 | |
| PRK14969 | 527 | DNA polymerase III subunits gamma and tau; Provisi | 82.34 | |
| PF03193 | 161 | DUF258: Protein of unknown function, DUF258; Inter | 82.28 | |
| PRK15177 | 213 | Vi polysaccharide export ATP-binding protein VexC; | 82.28 | |
| PF00625 | 183 | Guanylate_kin: Guanylate kinase; InterPro: IPR0081 | 82.26 | |
| TIGR01166 | 190 | cbiO cobalt transport protein ATP-binding subunit. | 82.23 | |
| PF06818 | 202 | Fez1: Fez1; InterPro: IPR009638 This family repres | 82.22 | |
| TIGR02673 | 214 | FtsE cell division ATP-binding protein FtsE. This | 82.21 | |
| PRK14528 | 186 | adenylate kinase; Provisional | 82.05 | |
| TIGR00960 | 216 | 3a0501s02 Type II (General) Secretory Pathway (IIS | 82.05 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 82.05 | |
| COG4088 | 261 | Predicted nucleotide kinase [Nucleotide transport | 82.04 | |
| COG4619 | 223 | ABC-type uncharacterized transport system, ATPase | 82.04 | |
| PRK09473 | 330 | oppD oligopeptide transporter ATP-binding componen | 82.0 | |
| PRK15079 | 331 | oligopeptide ABC transporter ATP-binding protein O | 81.97 | |
| PF00005 | 137 | ABC_tran: ABC transporter This structure is on hol | 81.93 | |
| PRK03839 | 180 | putative kinase; Provisional | 81.93 | |
| KOG1962 | 216 | consensus B-cell receptor-associated protein and r | 81.92 | |
| PRK05537 | 568 | bifunctional sulfate adenylyltransferase subunit 1 | 81.88 | |
| PRK13341 | 725 | recombination factor protein RarA/unknown domain f | 81.85 | |
| cd03260 | 227 | ABC_PstB_phosphate_transporter Phosphate uptake is | 81.84 | |
| PF10226 | 195 | DUF2216: Uncharacterized conserved proteins (DUF22 | 81.83 | |
| PRK10416 | 318 | signal recognition particle-docking protein FtsY; | 81.82 | |
| TIGR03574 | 249 | selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem | 81.82 | |
| TIGR02788 | 308 | VirB11 P-type DNA transfer ATPase VirB11. The VirB | 81.82 | |
| COG1493 | 308 | HprK Serine kinase of the HPr protein, regulates c | 81.8 | |
| COG2274 | 709 | SunT ABC-type bacteriocin/lantibiotic exporters, c | 81.69 | |
| PRK10646 | 153 | ADP-binding protein; Provisional | 81.68 | |
| cd03225 | 211 | ABC_cobalt_CbiO_domain1 Domain I of the ABC compon | 81.58 | |
| PF10234 | 267 | Cluap1: Clusterin-associated protein-1; InterPro: | 81.5 | |
| PRK14531 | 183 | adenylate kinase; Provisional | 81.43 | |
| cd03259 | 213 | ABC_Carb_Solutes_like ABC Carbohydrate and Solute | 81.41 | |
| PRK14970 | 367 | DNA polymerase III subunits gamma and tau; Provisi | 81.36 | |
| PF14197 | 69 | Cep57_CLD_2: Centrosome localisation domain of PPC | 81.35 | |
| TIGR02880 | 284 | cbbX_cfxQ probable Rubsico expression protein CbbX | 81.29 | |
| cd03255 | 218 | ABC_MJ0796_Lo1CDE_FtsE This family is comprised of | 81.21 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 81.19 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 81.18 | |
| PRK14958 | 509 | DNA polymerase III subunits gamma and tau; Provisi | 81.07 | |
| PRK04195 | 482 | replication factor C large subunit; Provisional | 81.05 | |
| PRK14960 | 702 | DNA polymerase III subunits gamma and tau; Provisi | 81.02 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 81.0 | |
| PRK11022 | 326 | dppD dipeptide transporter ATP-binding subunit; Pr | 80.99 | |
| COG1123 | 539 | ATPase components of various ABC-type transport sy | 80.99 | |
| cd01983 | 99 | Fer4_NifH The Fer4_NifH superfamily contains a var | 80.93 | |
| PRK13768 | 253 | GTPase; Provisional | 80.93 | |
| PF01695 | 178 | IstB_IS21: IstB-like ATP binding protein; InterPro | 80.92 | |
| PRK06620 | 214 | hypothetical protein; Validated | 80.88 | |
| PF00158 | 168 | Sigma54_activat: Sigma-54 interaction domain; Inte | 80.87 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 80.84 | |
| PRK06921 | 266 | hypothetical protein; Provisional | 80.83 | |
| cd03116 | 159 | MobB Molybdenum is an essential trace element in t | 80.82 | |
| TIGR03608 | 206 | L_ocin_972_ABC putative bacteriocin export ABC tra | 80.81 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 80.79 | |
| PLN02796 | 347 | D-glycerate 3-kinase | 80.75 | |
| cd03292 | 214 | ABC_FtsE_transporter FtsE is a hydrophilic nucleot | 80.74 | |
| COG2204 | 464 | AtoC Response regulator containing CheY-like recei | 80.72 | |
| cd03296 | 239 | ABC_CysA_sulfate_importer Part of the ABC transpor | 80.71 | |
| KOG3354 | 191 | consensus Gluconate kinase [Carbohydrate transport | 80.65 | |
| PRK14950 | 585 | DNA polymerase III subunits gamma and tau; Provisi | 80.63 | |
| TIGR00678 | 188 | holB DNA polymerase III, delta' subunit. At positi | 80.57 | |
| cd03229 | 178 | ABC_Class3 This class is comprised of all BPD (Bin | 80.57 | |
| cd02026 | 273 | PRK Phosphoribulokinase (PRK) is an enzyme involve | 80.55 | |
| COG1126 | 240 | GlnQ ABC-type polar amino acid transport system, A | 80.54 | |
| cd03258 | 233 | ABC_MetN_methionine_transporter MetN (also known a | 80.39 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 80.36 | |
| PF07889 | 126 | DUF1664: Protein of unknown function (DUF1664); In | 80.36 | |
| cd01124 | 187 | KaiC KaiC is a circadian clock protein primarily f | 80.35 | |
| cd03235 | 213 | ABC_Metallic_Cations ABC component of the metal-ty | 80.33 | |
| PF05262 | 489 | Borrelia_P83: Borrelia P83/100 protein; InterPro: | 80.31 | |
| PRK12704 | 520 | phosphodiesterase; Provisional | 80.31 | |
| PRK11176 | 582 | lipid transporter ATP-binding/permease protein; Pr | 80.29 | |
| PRK12608 | 380 | transcription termination factor Rho; Provisional | 80.29 | |
| PRK06305 | 451 | DNA polymerase III subunits gamma and tau; Validat | 80.29 | |
| PRK10246 | 1047 | exonuclease subunit SbcC; Provisional | 80.26 | |
| PRK10436 | 462 | hypothetical protein; Provisional | 80.22 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 80.17 | |
| PF09304 | 107 | Cortex-I_coil: Cortexillin I, coiled coil; InterPr | 80.16 | |
| PRK10361 | 475 | DNA recombination protein RmuC; Provisional | 80.16 | |
| smart00072 | 184 | GuKc Guanylate kinase homologues. Active enzymes c | 80.07 |
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-231 Score=2135.53 Aligned_cols=1312 Identities=35% Similarity=0.533 Sum_probs=1022.2
Q ss_pred CCCCCcccCCCCCChHHHHHHHHHHhhcCCccccccceeEEeCCCCCCCCCCCHHHHHHhhcCCcCCCCcchhhHHHHHH
Q 000453 22 AGGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAY 101 (1491)
Q Consensus 22 ~~~~~Dl~~L~~l~e~~vl~~L~~Ry~~~~iYT~~G~~LiavNP~~~l~~ly~~~~~~~y~~~~~~~~~PHifaiA~~Ay 101 (1491)
.+++||||.|+|||||+|||||++||..++||||+|.||||||||..+| ||++++++.|++++..+++|||||||++||
T Consensus 65 ~~~vdDLt~LSyLNEpsVl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~-iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY 143 (1463)
T COG5022 65 FDGVDDLTELSYLNEPAVLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLG-IYTDDIIQSYSGKNRLELEPHVFAIAEEAY 143 (1463)
T ss_pred ccCchhhhhhhccCcHHHHHHHHHHhhcCceeEEeeeEEEEecCcccCC-CccHHHHHHhccCccccCCchHHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHhcCCCeEEEEcCCCCCChhHHHHHHHHHHHHhcCCCCCCcccHHHHHHhcCchhhhhccccccCCCCCCcccceEE
Q 000453 102 RAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVE 181 (1491)
Q Consensus 102 ~~m~~~~~~QsIiisGeSGaGKT~~~k~~~~yl~~~~~~~~~~~~~i~~~il~snpilEaFGNAkT~~N~NSSRfgk~~~ 181 (1491)
+.|...++||||||||||||||||+||+||+|||++++.++.....||++||++||||||||||||+|||||||||||++
T Consensus 144 ~~lls~~eNQtIiISGESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyik 223 (1463)
T COG5022 144 RNLLSEKENQTIIISGESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIK 223 (1463)
T ss_pred HHHHhcCCCceEEEecCCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEE
Confidence 99999999999999999999999999999999999998776666789999999999999999999999999999999999
Q ss_pred EEecCCCCccceeeeccccccccccccCCCCCcceeehhcccCCH-hhHhhcCCCCCCCCccccCCCccccCCCCcHHHH
Q 000453 182 IQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPH-EDIAKYKLGSPKSFHYLNQSNCYELDGVSDAHEY 260 (1491)
Q Consensus 182 l~f~~~g~i~ga~i~tyLLEksRv~~~~~~ErnfHiFYql~~~~~-~~~~~~~L~~~~~~~yl~~~~~~~~~~~~d~~~f 260 (1491)
|.||.+|.|+||+|+||||||||||+|+.+|||||||||||++++ ..++.+++..|.+|+||++|+|..++|+||+++|
T Consensus 224 I~Fd~~g~I~GA~I~~YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY~Yl~~~~~~~I~gIdD~kef 303 (1463)
T COG5022 224 IEFDENGEICGAKIETYLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDYIYLSQGGCDKIDGIDDAKEF 303 (1463)
T ss_pred EEECCCCceechhhhhhhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhhHhHhhcCCCcCCCcccHHHH
Confidence 999999999999999999999999999999999999999999544 4455666789999999999999999999999999
Q ss_pred HHHHhhhhhcCCCHHHHHHHHHHHHHHHHhccccccCCCcccccccccccchHHHHHHHHHcCCCHHHHHHHHhheeEEe
Q 000453 261 LATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVT 340 (1491)
Q Consensus 261 ~~~~~al~~lG~~~~~~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~l~~~~~~~ 340 (1491)
..|+.||.++||+.++|.+||++||||||||||+|..+++ +++...+++ .++.+|.|||||++.|.+||++|.|.+
T Consensus 304 k~t~~AlktiGi~~eeq~~IF~iLAaILhiGNIef~~~r~-g~a~~~~~~---~~~~~c~LLgId~~~f~k~lvk~~ikt 379 (1463)
T COG5022 304 KITLDALKTIGIDEEEQDQIFKILAAILHIGNIEFKEDRN-GAAIFSDNS---VLDKACYLLGIDPSLFVKWLVKRQIKT 379 (1463)
T ss_pred HHHHHHHHHhCCChHHHHHHHHHHHHHHhhcceeeeeccc-chhhcCCch---HHHHHHHHhCCCHHHHHHHHHHhHhhc
Confidence 9999999999999999999999999999999999988654 444444433 599999999999999999999999999
Q ss_pred CCceEeccCChhhHHHhHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCeEEEEeeccCCCCCCCCChHHHHHHHhhHHHH
Q 000453 341 PEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQ 420 (1491)
Q Consensus 341 ~~e~~~~~~~~~~a~~~rdalak~lY~~LF~wiV~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeQlcINyaNEkLq 420 (1491)
++|.|.++++..||..+||||||+||++||+|||++||.+|..++...+|||||||||||+|+.||||||||||||||||
T Consensus 380 ~~E~i~~~~n~~QA~~irdslAK~lY~~lFdwiV~rIN~sL~~~~~~~~fIGVLDIyGFEiFEkNSFEQlCINYtNEKLQ 459 (1463)
T COG5022 380 GGEWIVVPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDHSAAASNFIGVLDIYGFEIFEKNSFEQLCINYTNEKLQ 459 (1463)
T ss_pred CceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccceeEEeecchhhhccCcHHHHHHhhhhHHHH
Confidence 99999999999999999999999999999999999999999987777899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCcccccccccChHHHHHHhhc-CcccccccchhhhCCCCCchHHHHHHHHHHhc--CCCCcc
Q 000453 421 QHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEK-KPGGIIALLDEACMFPKSTHETFSQKLCQTFA--KNNRFS 497 (1491)
Q Consensus 421 ~~f~~~~f~~eq~~y~~E~I~~~~i~~~dn~~~ldli~~-~~~Gil~lLdee~~~p~~~d~~~~~kl~~~~~--~~~~~~ 497 (1491)
|+||+|||++||+||.+|||+|++|+|.|||+||||||+ .|.|||++|||||.+|.|+|++|.+||++.+. .++.|.
T Consensus 460 Q~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~ 539 (1463)
T COG5022 460 QFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFK 539 (1463)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchHHHHHHHHHhccccCcccc
Confidence 999999999999999999999999999999999999998 24599999999999999999999999999986 467899
Q ss_pred CCCCCCCCeEEEecccceeeeccchhhhcchhhHHHHHHHHHhcchhHHhhcCCCCCcCccCCCCCcchhHHHHHHHHHH
Q 000453 498 KPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESSKSSKFSSIGSRFKLQLQSL 577 (1491)
Q Consensus 498 ~p~~~~~~F~i~Hyag~V~Y~~~gfl~kN~d~~~~~~~~ll~~S~~~~v~~lf~~~~~~~~~~~~~~tv~~~f~~~l~~L 577 (1491)
+||+....|+|+||||+|+|+++||++||||++++++++|+..|+|+||+.||+...+. .+.++++|+|+.||.||.+|
T Consensus 540 ~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~-~~K~~~pT~gs~~K~sl~~L 618 (1463)
T COG5022 540 KSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENI-ESKGRFPTLGSRFKESLNSL 618 (1463)
T ss_pred ccccCCCceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhc-cccCCCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999954333 33468899999999999999
Q ss_pred HHHHhccCCeEEEecCCCCCCCCCCCcchhhHhhhcccChhHHHHhhhccCCcccchHHHHHhhcccccCccc-----CC
Q 000453 578 METLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFVNRFGILAPEVLE-----GN 652 (1491)
Q Consensus 578 ~~~l~~t~~hfIrCIkPN~~~~~~~fd~~~v~~QLr~~gvle~iri~~~Gyp~r~~~~~F~~ry~~l~~~~~~-----~~ 652 (1491)
|++|++|+||||||||||..|.|+.||+.+|++|||||||+|+|||+|+|||+||+|+||+.||++|.|.... +.
T Consensus 619 m~tl~sTqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGFP~R~~f~EFv~RY~IL~p~~~~~~~~~~~ 698 (1463)
T COG5022 619 MSTLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGFPSRWTFDEFVQRYRILSPSKSWTGEYTWK 698 (1463)
T ss_pred HHHHHhcCCceeEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccCchhhhHHHHHHHHHHhcccccccccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997432 22
Q ss_pred CchHHHHHHHHHHcCCC--CeeeccceeecccchhhHHhHHHHhhhhHHHHHHHHHHhhHHHHHHHhhhhhhHHHHHHHH
Q 000453 653 YDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFL 730 (1491)
Q Consensus 653 ~~~~~~~~~il~~~~~~--~~~iGkTkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~R~~~~Rk~~~~~r~aai~IQa~~ 730 (1491)
.|.+.+|+.||..+.++ .||+|+||||||+|+++.||.+|...+..+++.||+.|||++.|++|.+..+.+..+|...
T Consensus 699 ~~~~~~~~~IL~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~ 778 (1463)
T COG5022 699 EDTKNAVKSILEELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQ 778 (1463)
T ss_pred hHHHHHHHHHHHhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46799999999998876 5999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhHhHHHHHHHHhhHHHHHhHHHHH-HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000453 731 RGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTVRSSAMILQ-TGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAY 809 (1491)
Q Consensus 731 Rg~laRk~~~~~r~~~AAi~IQ~~~Rg~~~Rr~y~~~r~a~i~IQ-s~~Rg~~aRr~~~~~~~~~aAi~IQ~~~R~~~~r 809 (1491)
+|++.|+....--...+++.+|..||....|+.|+.....++.+| ..+|....+.........++++.+|+.||....+
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~ 858 (1463)
T COG5022 779 HGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAK 858 (1463)
T ss_pred cccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999877666666799999999999999999999999999999 6777777776667777889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000453 810 SYYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEKRLRTDLEEAKSQEIAKLQE 889 (1491)
Q Consensus 810 ~~y~~~~~a~i~iQ~~~R~~~ark~l~~lk~~a~e~~~l~~~~~~le~k~~el~~~L~~e~~~~~~lee~~~~e~~~L~~ 889 (1491)
++|..+.+..+.+|+.+|...|++.+..++.+.+++..+......++.++.++...+.......... +.+....|+.
T Consensus 859 kr~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~~~l~~~~~~l~~~~~el~~~~~s~~~~~~~~---k~e~~a~lk~ 935 (1463)
T COG5022 859 KRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEF---KTELIARLKK 935 (1463)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHHHHHhhccchhhhhhhHH---HHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988876655211100000 0011111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000453 890 ALHAMQLRVDDANSLVIKEREAARKAIKEAPPVIKETPVII-QDTEKINSLTAEVENLKGLLQSQTQTADEAKQAFTVSE 968 (1491)
Q Consensus 890 ~l~~l~~~l~~~~~~l~~e~~~~~~~~ee~~~~~~e~~~l~-~~e~~~~~L~~e~~~Lk~ei~~l~~el~ele~~~~ele 968 (1491)
-+.. . .+++.+... ....++.+|.....+|++........+...+..+.+..
T Consensus 936 ~l~~-------------------------~--d~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~k~~~~~~~~~~ 988 (1463)
T COG5022 936 LLNN-------------------------I--DLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGN 988 (1463)
T ss_pred Hhhc-------------------------c--cccchhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhcc
Confidence 1111 0 000000000 01113344444445555444444333333333222222
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhcCchhHhhhhCccccccccCCCCCCCC
Q 000453 969 AKNGEL---TKKLKDAEKRVDELQDSVQRLAEK---VSNLESENQVLRQQALAISPTAKALAARPKTTIIQRTPVNGNIL 1042 (1491)
Q Consensus 969 ~~~~~l---~~el~~le~~~~~L~eel~~Leek---i~~Le~E~~~Lkq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1042 (1491)
...+++ .+++.+...+...+++....+++. +..|....+....... .++...+ ..+....+
T Consensus 989 ~~~~el~~~~~~l~~~~~~~~~l~~~~~~lk~~~~~~~~l~~~~~~~~s~~~-----------~~~~~~~--~~~~~~~~ 1055 (1463)
T COG5022 989 KANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISSEST-----------ELSILKP--LQKLKGLL 1055 (1463)
T ss_pred cHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccccchhhhhhhhhhhhccchh-----------hhhccCc--ccchhhhh
Confidence 222211 111222111111122222222221 2222222222211000 0000000 00000000
Q ss_pred CCccccccCcccccCCCCCCCCCccccccchhhhhccHHHHHHhhh-ccCCCCCC-ccchhHHHH-HHHhcccc-cccch
Q 000453 1043 NGEMKKVHDSVLTVPGVRDVEPEHRPQKTLNEKQQENQDLLIKCIS-QDLGFSGG-KPVAACLIY-KCLLHWRS-FEVER 1118 (1491)
Q Consensus 1043 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~l~~~l~-~~~~~~~~-kp~pA~il~-~cl~~~~~-~~~e~ 1118 (1491)
..+...........+..+ +....-.....+.+....+.+.+. +++.+.+- -+.||..+. ....+|+. ...+.
T Consensus 1056 ~~~~~~l~~~~~~l~~~r----~~~~~~~~q~~~~e~t~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 1131 (1463)
T COG5022 1056 LLENNQLQARYKALKLRR----ENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQMIKLNLLQEI 1131 (1463)
T ss_pred hHHHHHhhhhHhhhhhcC----cccchhHHHHHHHHhhhhhhhhhccchhhhhcccccchhhHHHHHHHHhhccchHHhh
Confidence 000000000000000000 000000000111222223333332 33323221 122554443 34446775 44455
Q ss_pred HHHHHHHHHHHHhhhhcc---CCcccchhhHHHHHHHHHHHHHhhhhcCCCCCCcccccCCccchhhcccccccCCCCCC
Q 000453 1119 TSIFDRIIQTISGAIEVH---DNNDRLSYWLSNASTLLLLLQRTLKASGAASLTPQRRRSTSSSLLGRMSQGLRASPQSA 1195 (1491)
Q Consensus 1119 ~~ll~~ii~~I~~~v~~~---~d~~~l~fWLSN~~~LL~~lq~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1195 (1491)
..++...+..++.+...- +-.-...||.+|...+++.-.-. ...+.+.. ..+++
T Consensus 1132 ~~~~~~~~~~le~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-------~~~~~~~~--~~~~~-------------- 1188 (1463)
T COG5022 1132 SKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFA-------ALSEKRLY--QSALY-------------- 1188 (1463)
T ss_pred hhHHHHHHhhccchhccccchhccccccccccccccCCCCCchh-------hcchhhhh--Hhhhh--------------
Confidence 666666666666655432 22345789999999887411000 00000000 00000
Q ss_pred CcccccccccccchhhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc--CCCCCccccccCCCcchh
Q 000453 1196 GIPFLNSRILSGLDDLRQVEAKYPALLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQ--APRTSRASLIKGRSQANA 1273 (1491)
Q Consensus 1196 ~~~~~~~~l~~~~~~~~~v~~~~~~~~fkqqL~~~~~~iy~~l~~~l~~~L~~~L~~~i~--~~~~~~~~~~~~~~~~~~ 1273 (1491)
+.+. .+..+++. ..+..+..+..++|..|.... ++.+++...+- ......+++. .++.
T Consensus 1189 d~~~-----~~s~s~v~---------~l~~~l~~~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~~~~----~~~~ 1248 (1463)
T COG5022 1189 DEKS-----KLSSSEVN---------DLKNELIALFSKIFSGWPRGD--KLKKLISEGWVPTEYSTSLKGFN----NLNK 1248 (1463)
T ss_pred cccc-----cccHHHHH---------HHHHHHHHHHHhccccchhhh--hhhhhhhhccchhhhcccccccc----chhh
Confidence 0000 00011222 225677788888888887654 23333321110 0001111110 0122
Q ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhHHHHHHhhhcCCCCCcchhhHHHhchHHHHHHHh
Q 000453 1274 VAQQALIAHWQSIVKSLNNYLKIMRANYVPSFLIRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEFVKAGLAELEQWCH 1353 (1491)
Q Consensus 1274 ~~~~~~~~~~~~il~~L~~~~~~L~~~~V~~~l~~Q~f~Qlf~~ina~lfN~Ll~r~~~cs~s~G~qIr~nls~LE~W~~ 1353 (1491)
.+..+...+.+.++.+++.+.+++..+.+.+.+..-.++++.-++|+.+||.|..|..-..|+.|.++.+|.+.+++||+
T Consensus 1249 ~~~~~~~~~~~~ll~~~n~i~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~n~L~~~~~~~~~k~~~~~~~n~~~~~~w~~ 1328 (1463)
T COG5022 1249 KFDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATINSLLQYINVGLFNALRTKASSLRWKSATEVNYNSEELDDWCR 1328 (1463)
T ss_pred cccCcccCcHHHHHHHHHHHHHHHHHhhcchhhhhHHHHhHhhhcchhhhhhhhcccCccchhhcccccccchhhhHHHH
Confidence 23334556778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcccchHHHhHHHHHHHHHHhhcCCCccCHHHHHhccCCCCCHHHHHHHHhcCccCCCCCCCCCHHHHHHHHhhhh
Q 000453 1354 DSTEEFAGSAWDELRHIRQAVGFLVIHQKPKKTLKEITNDLCPVLSIQQLYRISTMYWDDKYGTHSVSSEVISSMRVMMM 1433 (1491)
Q Consensus 1354 ~~~~~~~~~~~~~L~~i~Qa~~lLq~~kk~~~~~~~i~~~~C~~Ls~~Ql~kiL~~Y~~d~~e~~~vs~~~i~~v~~~~~ 1433 (1491)
.++ ...+..+|+++.||+..+++.+++..+++++ .+.|.+|+|.|+.+|+.+|.|.+++ .++|.++.++|.+...
T Consensus 1329 ~~~---i~~~~~~l~~l~q~~k~~~~~~~dl~~~~~~-~~~~~~l~~~~~~~L~~~y~~~~~e-~~l~ke~~~~~~a~~~ 1403 (1463)
T COG5022 1329 EFE---ISDVDEELEELIQAVKVLQLLKDDLNKLDEL-LDACYSLNPAEIQNLKSRYDPADKE-NNLPKEILKKIEALLI 1403 (1463)
T ss_pred hhc---ccchHHHHHHHHhhhhhhhhhhCCHHHHHHH-HHHHHhcCHHHHHHHHHhhhhhccc-CCChHHHHHHHhhhhh
Confidence 998 3445589999999999999997777777777 6999999999999999999999998 5999999977765554
Q ss_pred c
Q 000453 1434 D 1434 (1491)
Q Consensus 1434 ~ 1434 (1491)
.
T Consensus 1404 ~ 1404 (1463)
T COG5022 1404 K 1404 (1463)
T ss_pred H
Confidence 3
|
|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01380 MYSc_type_V Myosin motor domain, type V myosins | Back alignment and domain information |
|---|
| >cd01381 MYSc_type_VII Myosin motor domain, type VII myosins | Back alignment and domain information |
|---|
| >cd01377 MYSc_type_II Myosin motor domain, type II myosins | Back alignment and domain information |
|---|
| >cd01378 MYSc_type_I Myosin motor domain, type I myosins | Back alignment and domain information |
|---|
| >cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata | Back alignment and domain information |
|---|
| >cd01387 MYSc_type_XV Myosin motor domain, type XV myosins | Back alignment and domain information |
|---|
| >cd01385 MYSc_type_IX Myosin motor domain, type IX myosins | Back alignment and domain information |
|---|
| >cd01382 MYSc_type_VI Myosin motor domain, type VI myosins | Back alignment and domain information |
|---|
| >cd01379 MYSc_type_III Myosin motor domain, type III myosins | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00242 MYSc Myosin | Back alignment and domain information |
|---|
| >KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00124 MYSc Myosin motor domain | Back alignment and domain information |
|---|
| >cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >KOG1892 consensus Actin filament-binding protein Afadin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF01843 DIL: DIL domain; InterPro: IPR018444 Dilute encodes a novel type of myosin heavy chain, with a tail, or C-terminal, region that has elements of both type II (alpha-helical coiled-coil) and type I (non-coiled-coil) myosin heavy chains | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PTZ00014 myosin-A; Provisional | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ] | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane | Back alignment and domain information |
|---|
| >PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >KOG2991 consensus Splicing regulator [RNA processing and modification] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription] | Back alignment and domain information |
|---|
| >cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A | Back alignment and domain information |
|---|
| >TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN | Back alignment and domain information |
|---|
| >PF14915 CCDC144C: CCDC144C protein coiled-coil region | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK06696 uridine kinase; Validated | Back alignment and domain information |
|---|
| >TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >TIGR00150 HI0065_YjeE ATPase, YjeE family | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
| >cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK05480 uridine/cytidine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK13833 conjugal transfer protein TrbB; Provisional | Back alignment and domain information |
|---|
| >cd01131 PilT Pilus retraction ATPase PilT | Back alignment and domain information |
|---|
| >PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport | Back alignment and domain information |
|---|
| >PRK00300 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 | Back alignment and domain information |
|---|
| >PHA02544 44 clamp loader, small subunit; Provisional | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PRK12402 replication factor C small subunit 2; Reviewed | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >PRK10698 phage shock protein PspA; Provisional | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >TIGR00235 udk uridine kinase | Back alignment and domain information |
|---|
| >PRK05541 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >smart00382 AAA ATPases associated with a variety of cellular activities | Back alignment and domain information |
|---|
| >PRK08233 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00301 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK06762 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG0978 consensus E3 ubiquitin ligase involved in syntaxin degradation [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK07261 topology modulation protein; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PRK06547 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK14961 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR02173 cyt_kin_arch cytidylate kinase, putative | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor | Back alignment and domain information |
|---|
| >cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 | Back alignment and domain information |
|---|
| >cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >COG1660 Predicted P-loop-containing kinase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB | Back alignment and domain information |
|---|
| >PRK08118 topology modulation protein; Reviewed | Back alignment and domain information |
|---|
| >KOG1003 consensus Actin filament-coating protein tropomyosin [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure | Back alignment and domain information |
|---|
| >PRK00131 aroK shikimate kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway | Back alignment and domain information |
|---|
| >PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins | Back alignment and domain information |
|---|
| >PLN03025 replication factor C subunit; Provisional | Back alignment and domain information |
|---|
| >PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK10078 ribose 1,5-bisphosphokinase; Provisional | Back alignment and domain information |
|---|
| >KOG0018 consensus Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF10186 Atg14: UV radiation resistance protein and autophagy-related subunit 14; InterPro: IPR018791 Class III phosphatidylinositol 3-kinase (PI3-kinase) regulates multiple membrane trafficking | Back alignment and domain information |
|---|
| >cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PRK14737 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 | Back alignment and domain information |
|---|
| >PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) | Back alignment and domain information |
|---|
| >TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family | Back alignment and domain information |
|---|
| >PRK00889 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) | Back alignment and domain information |
|---|
| >TIGR00554 panK_bact pantothenate kinase, bacterial type | Back alignment and domain information |
|---|
| >PF13245 AAA_19: Part of AAA domain | Back alignment and domain information |
|---|
| >PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases | Back alignment and domain information |
|---|
| >PF05729 NACHT: NACHT domain | Back alignment and domain information |
|---|
| >PRK13851 type IV secretion system protein VirB11; Provisional | Back alignment and domain information |
|---|
| >COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF12846 AAA_10: AAA-like domain | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01420 pilT_fam pilus retraction protein PilT | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) | Back alignment and domain information |
|---|
| >TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB | Back alignment and domain information |
|---|
| >TIGR02977 phageshock_pspA phage shock protein A | Back alignment and domain information |
|---|
| >PF10205 KLRAQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019343 This entry represents a N-terminal 100 residues long domain, which contains a conserved KLRAQ motif | Back alignment and domain information |
|---|
| >PRK14956 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK14738 gmk guanylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR03263 guanyl_kin guanylate kinase | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PRK13900 type IV secretion system ATPase VirB11; Provisional | Back alignment and domain information |
|---|
| >PRK06217 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B | Back alignment and domain information |
|---|
| >PRK00440 rfc replication factor C small subunit; Reviewed | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF12777 MT: Microtubule-binding stalk of dynein motor; InterPro: IPR024743 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold) | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK09111 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK03846 adenylylsulfate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants | Back alignment and domain information |
|---|
| >PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional | Back alignment and domain information |
|---|
| >PRK12704 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] | Back alignment and domain information |
|---|
| >PRK06645 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd01120 RecA-like_NTPases RecA-like NTPases | Back alignment and domain information |
|---|
| >PRK05896 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK14964 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A | Back alignment and domain information |
|---|
| >PF09738 DUF2051: Double stranded RNA binding protein (DUF2051); InterPro: IPR019139 This entry represents transcriptional repressors which preferentially bind to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate | Back alignment and domain information |
|---|
| >PRK13764 ATPase; Provisional | Back alignment and domain information |
|---|
| >TIGR02902 spore_lonB ATP-dependent protease LonB | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >PRK09825 idnK D-gluconate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK05057 aroK shikimate kinase I; Reviewed | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG1103 consensus Predicted coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG4809 consensus Rab6 GTPase-interacting protein involved in endosome-to-TGN transport [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK13342 recombination factor protein RarA; Reviewed | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop | Back alignment and domain information |
|---|
| >PHA00729 NTP-binding motif containing protein | Back alignment and domain information |
|---|
| >TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PF03962 Mnd1: Mnd1 family; InterPro: IPR005647 This family of proteins includes meiotic nuclear division protein 1 (MND1) from Saccharomyces cerevisiae (Baker's yeast) | Back alignment and domain information |
|---|
| >TIGR02533 type_II_gspE general secretory pathway protein E | Back alignment and domain information |
|---|
| >PRK04182 cytidylate kinase; Provisional | Back alignment and domain information |
|---|
| >PTZ00112 origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
| >PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] | Back alignment and domain information |
|---|
| >PRK14955 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >PF13555 AAA_29: P-loop containing region of AAA domain | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK04040 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch | Back alignment and domain information |
|---|
| >PRK07667 uridine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK14527 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14957 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF03215 Rad17: Rad17 cell cycle checkpoint protein | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only] | Back alignment and domain information |
|---|
| >COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
| >PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional | Back alignment and domain information |
|---|
| >KOG0249 consensus LAR-interacting protein and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PRK15422 septal ring assembly protein ZapB; Provisional | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK06761 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PRK13894 conjugal transfer ATPase TrbB; Provisional | Back alignment and domain information |
|---|
| >cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] | Back alignment and domain information |
|---|
| >COG3074 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional | Back alignment and domain information |
|---|
| >PRK00106 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >PRK15453 phosphoribulokinase; Provisional | Back alignment and domain information |
|---|
| >PRK08356 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR03499 FlhF flagellar biosynthetic protein FlhF | Back alignment and domain information |
|---|
| >cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) | Back alignment and domain information |
|---|
| >TIGR02903 spore_lon_C ATP-dependent protease, Lon family | Back alignment and domain information |
|---|
| >COG1382 GimC Prefoldin, chaperonin cofactor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14732 coaE dephospho-CoA kinase; Provisional | Back alignment and domain information |
|---|
| >PRK04220 2-phosphoglycerate kinase; Provisional | Back alignment and domain information |
|---|
| >COG0802 Predicted ATPase or kinase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR00064 ftsY signal recognition particle-docking protein FtsY | Back alignment and domain information |
|---|
| >PRK14962 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00455 apsK adenylylsulfate kinase (apsK) | Back alignment and domain information |
|---|
| >TIGR02881 spore_V_K stage V sporulation protein K | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02868 CydC thiol reductant ABC exporter, CydC subunit | Back alignment and domain information |
|---|
| >PRK00698 tmk thymidylate kinase; Validated | Back alignment and domain information |
|---|
| >PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein | Back alignment and domain information |
|---|
| >PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional | Back alignment and domain information |
|---|
| >PRK14974 cell division protein FtsY; Provisional | Back alignment and domain information |
|---|
| >KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively | Back alignment and domain information |
|---|
| >PF07106 TBPIP: Tat binding protein 1(TBP-1)-interacting protein (TBPIP); InterPro: IPR010776 This family consists of several eukaryotic TBP-1 interacting protein (TBPIP) sequences | Back alignment and domain information |
|---|
| >TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family | Back alignment and domain information |
|---|
| >TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB | Back alignment and domain information |
|---|
| >PRK09112 DNA polymerase III subunit delta'; Validated | Back alignment and domain information |
|---|
| >PRK14969 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis | Back alignment and domain information |
|---|
| >PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional | Back alignment and domain information |
|---|
| >PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 | Back alignment and domain information |
|---|
| >TIGR01166 cbiO cobalt transport protein ATP-binding subunit | Back alignment and domain information |
|---|
| >PF06818 Fez1: Fez1; InterPro: IPR009638 This family represents the eukaryotic Fez1 protein | Back alignment and domain information |
|---|
| >TIGR02673 FtsE cell division ATP-binding protein FtsE | Back alignment and domain information |
|---|
| >PRK14528 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] | Back alignment and domain information |
|---|
| >PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional | Back alignment and domain information |
|---|
| >PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional | Back alignment and domain information |
|---|
| >PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems | Back alignment and domain information |
|---|
| >PRK03839 putative kinase; Provisional | Back alignment and domain information |
|---|
| >KOG1962 consensus B-cell receptor-associated protein and related proteins [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated | Back alignment and domain information |
|---|
| >PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed | Back alignment and domain information |
|---|
| >cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient | Back alignment and domain information |
|---|
| >PF10226 DUF2216: Uncharacterized conserved proteins (DUF2216); InterPro: IPR019359 Proteins in this entry are found in Metazoa and contain a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK10416 signal recognition particle-docking protein FtsY; Provisional | Back alignment and domain information |
|---|
| >TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal | Back alignment and domain information |
|---|
| >TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 | Back alignment and domain information |
|---|
| >COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] | Back alignment and domain information |
|---|
| >PRK10646 ADP-binding protein; Provisional | Back alignment and domain information |
|---|
| >cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota | Back alignment and domain information |
|---|
| >PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin | Back alignment and domain information |
|---|
| >PRK14531 adenylate kinase; Provisional | Back alignment and domain information |
|---|
| >cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup | Back alignment and domain information |
|---|
| >PRK14970 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF14197 Cep57_CLD_2: Centrosome localisation domain of PPC89 | Back alignment and domain information |
|---|
| >TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX | Back alignment and domain information |
|---|
| >cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) | Back alignment and domain information |
|---|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK14958 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PRK04195 replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
| >PRK14960 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional | Back alignment and domain information |
|---|
| >COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] | Back alignment and domain information |
|---|
| >cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain | Back alignment and domain information |
|---|
| >PRK13768 GTPase; Provisional | Back alignment and domain information |
|---|
| >PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >PRK06921 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes | Back alignment and domain information |
|---|
| >TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PLN02796 D-glycerate 3-kinase | Back alignment and domain information |
|---|
| >cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane | Back alignment and domain information |
|---|
| >COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import | Back alignment and domain information |
|---|
| >KOG3354 consensus Gluconate kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14950 DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >TIGR00678 holB DNA polymerase III, delta' subunit | Back alignment and domain information |
|---|
| >cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment | Back alignment and domain information |
|---|
| >cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes | Back alignment and domain information |
|---|
| >COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function | Back alignment and domain information |
|---|
| >cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs | Back alignment and domain information |
|---|
| >cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters | Back alignment and domain information |
|---|
| >PF05262 Borrelia_P83: Borrelia P83/100 protein; InterPro: IPR007926 This family consists of several Borrelia P83/P100 antigen proteins | Back alignment and domain information |
|---|
| >PRK12704 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
| >PRK11176 lipid transporter ATP-binding/permease protein; Provisional | Back alignment and domain information |
|---|
| >PRK12608 transcription termination factor Rho; Provisional | Back alignment and domain information |
|---|
| >PRK06305 DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >PRK10246 exonuclease subunit SbcC; Provisional | Back alignment and domain information |
|---|
| >PRK10436 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold) | Back alignment and domain information |
|---|
| >PRK10361 DNA recombination protein RmuC; Provisional | Back alignment and domain information |
|---|
| >smart00072 GuKc Guanylate kinase homologues | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1491 | ||||
| 2dfs_A | 1080 | 3-D Structure Of Myosin-V Inhibited State Length = | 0.0 | ||
| 1w9j_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-178 | ||
| 1w9i_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-177 | ||
| 1g8x_A | 1010 | Structure Of A Genetically Engineered Molecular Mot | 1e-177 | ||
| 2jhr_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-177 | ||
| 2aka_A | 776 | Structure Of The Nucleotide-Free Myosin Ii Motor Do | 1e-177 | ||
| 3mnq_A | 788 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-177 | ||
| 2xel_A | 776 | Molecular Mechanism Of Pentachloropseudilin Mediate | 1e-177 | ||
| 1jwy_A | 776 | Crystal Structure Of The Dynamin A Gtpase Domain Co | 1e-177 | ||
| 1d0x_A | 761 | Dictyostelium Myosin S1dc (Motor Domain Fragment) C | 1e-177 | ||
| 1fmv_A | 761 | Crystal Structure Of The Apo Motor Domain Of Dictyo | 1e-177 | ||
| 1yv3_A | 762 | The Structural Basis Of Blebbistatin Inhibition And | 1e-177 | ||
| 1w9l_A | 770 | Myosin Ii Dictyostelium Discoideum Motor Domain S45 | 1e-177 | ||
| 1mma_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-177 | ||
| 3myh_X | 762 | Insights Into The Importance Of Hydrogen Bonding In | 1e-176 | ||
| 2y0r_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-176 | ||
| 1w9k_A | 770 | Dictyostelium Discoideum Myosin Ii Motor Domain S45 | 1e-176 | ||
| 2y9e_X | 758 | Structural Basis For The Allosteric Interference Of | 1e-176 | ||
| 1mmd_A | 762 | Truncated Head Of Myosin From Dictyostelium Discoid | 1e-175 | ||
| 2xo8_A | 776 | Crystal Structure Of Myosin-2 In Complex With Tribr | 1e-175 | ||
| 1mmg_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-175 | ||
| 1mmn_A | 762 | X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga | 1e-175 | ||
| 1lvk_A | 762 | X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N | 1e-174 | ||
| 1oe9_A | 795 | Crystal Structure Of Myosin V Motor With Essential | 1e-170 | ||
| 3mkd_A | 692 | Crystal Structure Of Myosin-2 Dictyostelium Discoid | 1e-166 | ||
| 1w8j_A | 766 | Crystal Structure Of Myosin V Motor Domain - Nucleo | 1e-166 | ||
| 2x9h_A | 695 | Crystal Structure Of Myosin-2 Motor Domain In Compl | 1e-165 | ||
| 1qvi_A | 840 | Crystal Structure Of Scallop Myosin S1 In The Pre-P | 1e-143 | ||
| 1dfk_A | 830 | Nucleotide-Free Scallop Myosin S1-Near Rigor State | 1e-143 | ||
| 1dfl_A | 831 | Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra | 1e-143 | ||
| 1kk7_A | 837 | Scallop Myosin In The Near Rigor Conformation Lengt | 1e-143 | ||
| 1b7t_A | 835 | Myosin Digested By Papain Length = 835 | 1e-143 | ||
| 2vas_A | 788 | Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo | 1e-142 | ||
| 2x51_A | 789 | M6 Delta Insert1 Length = 789 | 1e-142 | ||
| 4dbq_A | 788 | Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos | 1e-141 | ||
| 2ec6_A | 838 | Placopecten Striated Muscle Myosin Ii Length = 838 | 1e-139 | ||
| 3l9i_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant | 1e-139 | ||
| 2os8_A | 840 | Rigor-Like Structures Of Muscle Myosins Reveal Key | 1e-139 | ||
| 2bki_A | 858 | Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St | 1e-138 | ||
| 3i5g_A | 839 | Crystal Structure Of Rigor-Like Squid Myosin S1 Len | 1e-138 | ||
| 4e7s_A | 798 | Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat | 1e-138 | ||
| 2v26_A | 784 | Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L | 1e-138 | ||
| 2bkh_A | 814 | Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc | 1e-138 | ||
| 4e7z_A | 798 | Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F | 1e-138 | ||
| 4dbp_A | 814 | Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal | 1e-138 | ||
| 4anj_A | 1052 | Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St | 1e-138 | ||
| 4dbr_A | 786 | Myosin Vi D179y (md) Pre-powerstroke State Length = | 1e-138 | ||
| 1i84_S | 1184 | Cryo-Em Structure Of The Heavy Meromyosin Subfragme | 1e-137 | ||
| 3dtp_B | 973 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-137 | ||
| 3dtp_A | 971 | Tarantula Heavy Meromyosin Obtained By Flexible Doc | 1e-137 | ||
| 3j04_A | 909 | Em Structure Of The Heavy Meromyosin Subfragment Of | 1e-137 | ||
| 1br1_A | 820 | Smooth Muscle Myosin Motor Domain-Essential Light C | 1e-136 | ||
| 4a7f_C | 697 | Structure Of The Actin-Tropomyosin-Myosin Complex ( | 1e-134 | ||
| 1lkx_A | 697 | Motor Domain Of Myoe, A Class-I Myosin Length = 697 | 1e-133 | ||
| 2w4g_M | 840 | Isometrically Contracting Insect Asynchronous Fligh | 1e-133 | ||
| 1br2_A | 791 | Smooth Muscle Myosin Motor Domain Complexed With Mg | 1e-133 | ||
| 2ycu_A | 995 | Crystal Structure Of Human Non Muscle Myosin 2c In | 1e-132 | ||
| 4db1_A | 783 | Cardiac Human Myosin S1dc, Beta Isoform Complexed W | 1e-130 | ||
| 2mys_A | 843 | Myosin Subfragment-1, Alpha Carbon Coordinates Only | 1e-123 | ||
| 1m8q_A | 840 | Molecular Models Of Averaged Rigor Crossbridges Fro | 1e-122 |
| >pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 | Back alignment and structure |
|
| >pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 | Back alignment and structure |
| >pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 | Back alignment and structure |
| >pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 | Back alignment and structure |
| >pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 | Back alignment and structure |
| >pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 | Back alignment and structure |
| >pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 | Back alignment and structure |
| >pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 | Back alignment and structure |
| >pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 | Back alignment and structure |
| >pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 | Back alignment and structure |
| >pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 | Back alignment and structure |
| >pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 | Back alignment and structure |
| >pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 | Back alignment and structure |
| >pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 | Back alignment and structure |
| >pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 | Back alignment and structure |
| >pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 | Back alignment and structure |
| >pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 | Back alignment and structure |
| >pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 | Back alignment and structure |
| >pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 | Back alignment and structure |
| >pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 | Back alignment and structure |
| >pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 | Back alignment and structure |
| >pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 | Back alignment and structure |
| >pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 | Back alignment and structure |
| >pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 | Back alignment and structure |
| >pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 | Back alignment and structure |
| >pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 | Back alignment and structure |
| >pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 | Back alignment and structure |
| >pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 | Back alignment and structure |
| >pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 | Back alignment and structure |
| >pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 | Back alignment and structure |
| >pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 | Back alignment and structure |
| >pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 | Back alignment and structure |
| >pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 | Back alignment and structure |
| >pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 | Back alignment and structure |
| >pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 | Back alignment and structure |
| >pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 | Back alignment and structure |
| >pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 | Back alignment and structure |
| >pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 | Back alignment and structure |
| >pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 | Back alignment and structure |
| >pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 | Back alignment and structure |
| >pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 | Back alignment and structure |
| >pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 | Back alignment and structure |
| >pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 | Back alignment and structure |
| >pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 | Back alignment and structure |
| >pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 | Back alignment and structure |
| >pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 | Back alignment and structure |
| >pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 | Back alignment and structure |
| >pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 | Back alignment and structure |
| >pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 | Back alignment and structure |
| >pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 | Back alignment and structure |
| >pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 1292 bits (3345), Expect = 0.0
Identities = 392/1043 (37%), Positives = 584/1043 (55%), Gaps = 46/1043 (4%)
Query: 4 VQVVTSVSKVFPEDTEAPAGGVDDMTKLSYLHEPGVLQNLATRY-ELNEIYTYTGNILIA 62
+ ++ P G +D+T LSYLHEP VL NL R+ + IYTY G +L+A
Sbjct: 50 YCLDPKTKELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVA 109
Query: 63 VNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSGESGAG 122
+NP+++LP +Y ++ Y G G++ PH+FAV + AY+ M + ++ SI+VSGESGAG
Sbjct: 110 INPYEQLP-IYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAG 168
Query: 123 KTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEI 182
KT + K MRY A + G + VE++VL SNP++E+ GNAKT RN+NSSRFGK++EI
Sbjct: 169 KTVSAKYAMRYFATVSGSAS--EANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEI 226
Query: 183 QFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLGSPKSFH 241
FDK RI GA +RTYLLE+SRV ++ ERNYH FY LCA A + +LG+ FH
Sbjct: 227 GFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFH 286
Query: 242 YLNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEI 301
Y Q +DG+ DA E + TR+A ++GISD Q IFR++A ILHLGN++F ++
Sbjct: 287 YTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEF-ASRDS 345
Query: 302 DSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRTLDPVNAVASRDAL 361
DS I + L + +L+ D + + L R + T E + + ++A+ +RDAL
Sbjct: 346 DSCAIPPKHD--PLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDAL 403
Query: 362 AKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCINFTNEKLQQ 421
AK IY+ LF+WIV+ +N ++ S IGVLDIYGFE+F+ NSFEQFCIN+ NEKLQQ
Sbjct: 404 AKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQ 463
Query: 422 HFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHET 481
FN HVFK+EQEEY +E+I W+ I+F DNQ ++LIE K G++ LLDE C PK + +T
Sbjct: 464 QFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEAKM-GVLDLLDEECKMPKGSDDT 522
Query: 482 FSQKLCQTFA-KNNRFSKPKLSRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTA 540
++QKL T K F KP+LS F I H+A +V YQ FL+KNKD V E +L +
Sbjct: 523 WAQKLYNTHLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKS 582
Query: 541 AK-CSFVAGLFPPLPEESS---------------------------KSSKFSSIGSRFKL 572
+K + LF + S ++G +F+
Sbjct: 583 SKKFKLLPELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRN 642
Query: 573 QLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRR 632
L LMETLNAT PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R
Sbjct: 643 SLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRW 702
Query: 633 TFYEFVNRFGILAPEVLEGNYDDQVACQMILDKKGL--KGYQIGKTKVFLRAGQMAELDA 690
T+ EF +R+ +L + + D + C+ +L+K L YQ GKTK+F RAGQ+A L+
Sbjct: 703 TYQEFFSRYRVLMKQK-DVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEK 761
Query: 691 RRAEVLGNAARKIQRQTRTYIARKEFILLRNAAVILQSFLRGEMARKLYEQLRREAAALK 750
RA+ L A +IQ+ R ++ RK+++ +R AA+ +Q ++RG AR LRR AA+
Sbjct: 762 IRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAII 821
Query: 751 IQTNFRAYVAQRSYLTVRSSAMILQTGLRAMVARNEFRLRKRTKAAIIAQAQWRCHQAYS 810
IQ R YV ++ Y +R + + LQ LR + RN++++ R +II Q R A
Sbjct: 822 IQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARV 881
Query: 811 YYKKLQRAIIVSQCGWRCRVARRELRKLKMAARETGALQEAKNKLEKRVEELTWRLQIEK 870
+Y + +AI+ QC +R +A+REL+KLK+ AR ++ LE ++ +L ++ +
Sbjct: 882 HYHRTLKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQN 941
Query: 871 RLRTDLEEAKSQEIAKLQEALHAMQLRVDDANSLVIKEREAARKAIKEAPPVIKETPVII 930
+ L E + ++ V+ + +E + A + I + +
Sbjct: 942 KEYKSLLEKMNNLEITYSTETEKLRSDVERL-RMSEEEAKNATNRVLSLQEEIAKLRKEL 1000
Query: 931 QD-TEKINSLTAEVENLKGLLQSQTQTADEAKQAFTVSEAKNGELTKKLKDAEKRVDELQ 989
+ ++ + K Q E K+ T+ + + EL +++ D K + E
Sbjct: 1001 HQTQTEKKTIEEWADKYK---HETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETM 1057
Query: 990 DSVQRLAEKVSNLESENQVLRQQ 1012
+ K L+ ++ LR Q
Sbjct: 1058 EKKLVEETKQLELDLNDERLRYQ 1080
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
| >2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 | Back alignment and structure |
|---|
| >2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 | Back alignment and structure |
|---|
| >1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 | Back alignment and structure |
|---|
| >1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 | Back alignment and structure |
|---|
| >4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 | Back alignment and structure |
|---|
| >2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae} Length = 419 | Back alignment and structure |
|---|
| >3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae} Length = 386 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Length = 129 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 | Back alignment and structure |
|---|
| >2bl0_A Major plasmodial myosin heavy chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 63 | Back alignment and structure |
|---|
| >1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} Length = 501 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1491 | ||||
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 0.0 | |
| d1kk8a2 | 789 | c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain | 1e-05 | |
| d1lkxa_ | 684 | c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 0.0 | |
| d2mysa2 | 794 | c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain | 3e-05 | |
| d1d0xa2 | 712 | c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain | 0.0 | |
| d1br2a2 | 710 | c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick | 0.0 | |
| d1w7ja2 | 730 | c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick | 0.0 | |
| d2es4d1 | 280 | a.137.15.1 (D:53-332) Lipase chaperone LifO (LipB) | 0.002 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Score = 779 bits (2013), Expect = 0.0
Identities = 286/775 (36%), Positives = 431/775 (55%), Gaps = 38/775 (4%)
Query: 3 FVQVVTSVSKVFPEDTEAPAG-----GVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTG 57
F + K+ E T A ++DM ++YL+E VL NL +RY IYTY+G
Sbjct: 10 FQYLAVDRKKLMKEQTAAFMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSG 69
Query: 58 NILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYRAMINEGKSNSILVSG 117
IAVNP++RLP +Y ++ +Y+G E+ PH+F+V D AY+ M+ + ++ S L++G
Sbjct: 70 LFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCLITG 128
Query: 118 ESGAGKTETTKMLMRYLAYLGG--------RSGVEGRTVEQQVLESNPVLEAFGNAKTVR 169
ESGAGKTE TK ++ YLA + S + ++E Q++++NPVLEA+GNAKT R
Sbjct: 129 ESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTR 188
Query: 170 NNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPHEDI 229
NNNSSRFGKF+ I F G+I+GA I TYLLE+SRV ERNYH FY +C+ ++
Sbjct: 189 NNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPEL 248
Query: 230 AKYKLGSPKSFHY-LNQSNCYELDGVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAIL 288
L +P S Y C +D + D E+ A DI+G + +E++++F+ A+IL
Sbjct: 249 NDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASIL 308
Query: 289 HLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDALIKRVMVTPEEVITRT 348
H+G + F + + + A L +A L AL+K + E++T+
Sbjct: 309 HMGEMKFKQRPREEQAESDGTA---EAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKG 365
Query: 349 LDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFE 408
+ V S ALAK++Y R+F+W+V ++N ++ IGVLDI GFE F NSFE
Sbjct: 366 QNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFE 425
Query: 409 QFCINFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALL 468
Q CIN+TNE+LQQ FN H+F +EQEEY +E I W +I+F + + + +KP GI+++L
Sbjct: 426 QLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSIL 485
Query: 469 DEACMFPKSTHETFSQKLCQTFAKNNRF-------SKPKLSRTDFTILHYAGEVTYQANH 521
+E CMFPK+ ++F KL Q NR ++P F + HYAG V Y
Sbjct: 486 EEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITG 545
Query: 522 FLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEES-------SKSSKFSSIGSRFKLQL 574
+L+KNKD + ALL A+K VA LF E + KSS F +I + + L
Sbjct: 546 WLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESL 605
Query: 575 QSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTF 634
LM+ L +T PH++RC+ PN + +P + + V+ QL+C GVLE IRI G+P+R +
Sbjct: 606 NKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIY 665
Query: 635 YEFVNRFGILAPEVL-EGNYDDQVACQMILDKKGLKG--YQIGKTKVFLRAGQMAELDAR 691
EF R+ ILAP + +G D + + IL + Y++G TKVF +AG + L+
Sbjct: 666 SEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEM 725
Query: 692 RAEVLGNAARKIQRQTRTYIARKEFILLRN---AAVILQSFLRGEMARKLYEQLR 743
R E L Q R Y+ RK + L++ ++Q +R + + ++ +
Sbjct: 726 RDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWK 780
|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1491 | |||
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1d0xa2 | 712 | Myosin S1, motor domain {Dictyostelium discoideum | 100.0 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 100.0 | |
| d1lkxa_ | 684 | Myosin S1, motor domain {Dictyostelium discoideum, | 100.0 | |
| d2mysa2 | 794 | Myosin S1, motor domain {Chicken (Gallus gallus), | 98.31 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 97.98 | |
| d1iqpa2 | 231 | Replication factor C {Archaeon Pyrococcus furiosus | 94.71 | |
| d1njfa_ | 239 | delta prime subunit of DNA polymerase III, N-domai | 93.74 | |
| d1sxjd2 | 237 | Replication factor C2 {Baker's yeast (Saccharomyce | 93.53 | |
| d1sxjb2 | 224 | Replication factor C4 {Baker's yeast (Saccharomyce | 93.19 | |
| d1m7ga_ | 208 | Adenosine-5'phosphosulfate kinase (APS kinase) {Fu | 93.03 | |
| d1w7ja2 | 730 | Myosin S1, motor domain {Chicken (Gallus gallus), | 91.34 | |
| d1m8pa3 | 183 | ATP sulfurylase C-terminal domain {Fungus (Penicil | 91.04 | |
| d1sxjc2 | 227 | Replication factor C3 {Baker's yeast (Saccharomyce | 90.95 | |
| d1rz3a_ | 198 | Hypothetical protein rbstp0775 {Bacillus stearothe | 89.93 | |
| d1np6a_ | 170 | Molybdopterin-guanine dinucleotide biosynthesis pr | 89.14 | |
| d1qhxa_ | 178 | Chloramphenicol phosphotransferase {Streptomyces v | 88.05 | |
| d1g6oa_ | 323 | Hexameric traffic ATPase, HP0525 {Helicobacter pyl | 88.01 | |
| d1sxja2 | 253 | Replication factor C1 {Baker's yeast (Saccharomyce | 87.78 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 87.24 | |
| d1x6va3 | 195 | Adenosine-5'phosphosulfate kinase (APS kinase) {Hu | 87.13 | |
| d1um8a_ | 364 | ClpX {Helicobacter pylori [TaxId: 210]} | 87.02 | |
| d1rkba_ | 173 | Adenylate kinase {Human (Homo sapiens), isoenzyme | 86.91 | |
| d2i3ba1 | 189 | Cancer-related NTPase, C1orf57 {Human (Homo sapien | 86.85 | |
| d1knqa_ | 171 | Gluconate kinase {Escherichia coli [TaxId: 562]} | 86.85 | |
| d1khta_ | 190 | Adenylate kinase {Archaeon Methanococcus voltae [T | 86.81 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 86.5 | |
| d1qf9a_ | 194 | UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 | 86.37 | |
| d1ye8a1 | 178 | Hypothetical kinase-like protein Aq_1292 {Aquifex | 85.78 | |
| d1ly1a_ | 152 | Polynucleotide kinase, kinase domain {Bacteriophag | 85.48 | |
| d1lvga_ | 190 | Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 | 84.91 | |
| d1kaga_ | 169 | Shikimate kinase (AroK) {Escherichia coli [TaxId: | 84.77 | |
| d1a5ta2 | 207 | delta prime subunit of DNA polymerase III, N-domai | 84.35 | |
| d1e6ca_ | 170 | Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax | 83.98 | |
| d1nksa_ | 194 | Adenylate kinase {Archaeon Sulfolobus acidocaldari | 83.81 | |
| d1sxje2 | 252 | Replication factor C5 {Baker's yeast (Saccharomyce | 83.49 | |
| d1y63a_ | 174 | Probable kinase LmjF30.1890 {Leishmania major [Tax | 82.65 | |
| d1gkya_ | 186 | Guanylate kinase {Baker's yeast (Saccharomyces cer | 82.49 | |
| d2bdta1 | 176 | Hypothetical protein BH3686 {Bacillus halodurans [ | 82.4 | |
| d1xjca_ | 165 | Molybdopterin-guanine dinucleotide biosynthesis pr | 82.34 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 81.89 | |
| d1viaa_ | 161 | Shikimate kinase (AroK) {Campylobacter jejuni [Tax | 81.41 | |
| d2pmka1 | 241 | Haemolysin B ATP-binding protein {Escherichia coli | 81.29 | |
| d1bifa1 | 213 | 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata | 81.13 | |
| d1uj2a_ | 213 | Uridine-cytidine kinase 2 {Human (Homo sapiens) [T | 81.07 | |
| d3b60a1 | 253 | Multidrug resistance ABC transporter MsbA, C-termi | 80.4 | |
| d1znwa1 | 182 | Guanylate kinase {Mycobacterium tuberculosis [TaxI | 80.36 | |
| d1kkma_ | 176 | HPr kinase HprK C-terminal domain {Lactobacillus c | 80.22 | |
| d1knxa2 | 177 | HPr kinase HprK C-terminal domain {Mycoplasma pneu | 80.09 |
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Myosin S1, motor domain species: Bay scallop (Aequipecten irradians) [TaxId: 31199]
Probab=100.00 E-value=0 Score=1606.36 Aligned_cols=718 Identities=40% Similarity=0.692 Sum_probs=659.3
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99786447999992889999999861297432236406772789779899888899981017868888625669999999
Q 000453 23 GGVDDMTKLSYLHEPGVLQNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVGDAAYR 102 (1491)
Q Consensus 23 ~~~~Dl~~L~~l~e~~vl~~L~~R~~~~~iyT~~G~vLiavNP~~~l~~iy~~~~~~~y~~~~~~~~~PHifaiA~~Ay~ 102 (1491)
.++|||+.|++|||++||++|+.||.++.||||+|++|||||||+.+| +|++++++.|+++..+++||||||||++||+
T Consensus 35 ~~v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~-iy~~~~~~~y~~~~~~~~~PHiyavA~~Ay~ 113 (789)
T d1kk8a2 35 EKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTEIPPHLFSVADNAYQ 113 (789)
T ss_dssp TTCSBGGGSSCCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCS-TTSHHHHHHHTTCCGGGSCCCHHHHHHHHHH
T ss_pred CCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCC-CCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 586310068999989999999999868996371888899988998889-9999999997089878999838999999999
Q ss_pred HHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCC--------CCCCHHHHHHHCCCHHHHHCCCCCCCCCCCC
Q ss_conf 89844997299970887997469989999999883288887--------7654887887317345531166456789988
Q 000453 103 AMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV--------EGRTVEQQVLESNPVLEAFGNAKTVRNNNSS 174 (1491)
Q Consensus 103 ~m~~~~~~QsIiisGeSGaGKT~~~k~~~~yl~~~~~~~~~--------~~~~v~~~il~s~~ileafGnAkT~~N~nSS 174 (1491)
.|..+++||||||||||||||||++|++|+||+.+++.... ....++++|+++||||||||||||++|+|||
T Consensus 114 ~m~~~~~nQ~IiisGESGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~il~~npiLEAFGNAkT~~N~NSS 193 (789)
T d1kk8a2 114 NMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAKTTRNNNSS 193 (789)
T ss_dssp HHHHHTSEEEEEEECSTTSSHHHHHHHHHHHHHHHSCCCCCC--------CCCHHHHHHHHHHHHHHHHEECCSSCTTEE
T ss_pred HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 99971899479997089998799999999999987156666554345555563999999876899855356788989647
Q ss_pred CCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEHHCCC-CCHHHHHHCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 5530689985599972320242000346432346999983112220124-9976685328999-9877335699953458
Q 000453 175 RFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCA-APHEDIAKYKLGS-PKSFHYLNQSNCYELD 252 (1491)
Q Consensus 175 Rfgk~~~l~f~~~~~i~ga~i~tylLEksRv~~~~~~ErnfhiFYql~~-~~~~~~~~~~l~~-~~~~~yl~~~~~~~~~ 252 (1491)
|||||++|+||.+|.|+||+|.+|||||||||.|++||||||||||||+ +++++++.+.|.+ +..|.|++++ +..++
T Consensus 194 RFGk~~~l~f~~~g~i~ga~i~~yLLEksRvv~~~~gErnfHIFY~ll~G~~~~~~~~~~l~~~~~~~~~l~~~-~~~~~ 272 (789)
T d1kk8a2 194 RFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGLYSFINQG-CLTVD 272 (789)
T ss_dssp SSEEEEEEEECTTSSEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHTSCSSGGGHHHHTCCSCGGGCTTTCSS-CSCBT
T ss_pred CCCEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHCCC-CCCCC
T ss_conf 72356798988999774540278648775046326544206999999828979999983799825445765399-83668
Q ss_pred CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 98949999999820313377989999999999999974265445787666531046100478999998709999989997
Q 000453 253 GVSDAHEYLATRRAMDIVGISDQEQEAIFRVVAAILHLGNIDFAKGKEIDSSVIKDEKSRFHLNMTAELLRCDAQSLEDA 332 (1491)
Q Consensus 253 ~~~d~~~f~~~~~al~~lG~~~~~~~~i~~ilaaILhLGni~f~~~~~~~~~~~~~~~~~~~l~~~a~LLgv~~~~L~~~ 332 (1491)
++||+++|..++.||+.+||+++++..||+|||||||||||+|......+.+.+.+. ..++.+|.||||++++|.++
T Consensus 273 ~~~d~~~f~~~~~al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~~~---~~~~~~a~LLgi~~~~L~~~ 349 (789)
T d1kk8a2 273 NIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGT---AEAEKVAFLCGINAGDLLKA 349 (789)
T ss_dssp TBCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEC----CCCEESCS---HHHHHHHHHHTSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCH---HHHHHHHHHHCCCHHHHHCC
T ss_conf 865699999999998753998999999998889875104403541587542214886---89999998849997774203
Q ss_pred HHHEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf 71106871785486038834178748889999999999999997210027788998289983036777788897578787
Q 000453 333 LIKRVMVTPEEVITRTLDPVNAVASRDALAKTIYSRLFDWIVEKINISIGQDPDSKSIIGVLDIYGFESFKCNSFEQFCI 412 (1491)
Q Consensus 333 l~~~~~~~~~e~~~~~~~~~~a~~~rd~lak~lY~~LF~wiv~~iN~~l~~~~~~~~~IgiLDi~GFE~f~~NsfeQlci 412 (1491)
|+++.+.+++|.+++++++.+|.++||+|||+||++||+|||.+||..|.+......+||||||||||+|+.||||||||
T Consensus 350 l~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~lY~~LF~wIV~~IN~~L~~~~~~~~~IgILDIfGFE~f~~NsfEQLcI 429 (789)
T d1kk8a2 350 LLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCI 429 (789)
T ss_dssp HHSCEEC----CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCSSBCHHHHHH
T ss_pred EEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEECCCCCHHHHHH
T ss_conf 16777760667443379989999999999999999999999987664307777765278873025423047686999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCC
Q ss_conf 87557889899999999989784211864212555693989998620866301021532079999559899999988139
Q 000453 413 NFTNEKLQQHFNQHVFKMEQEEYTREEINWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSQKLCQTFAK 492 (1491)
Q Consensus 413 NyanEklq~~f~~~~f~~eq~~y~~E~i~~~~i~~~dn~~~ldli~~~~~Gil~lLdee~~~p~~~d~~~~~kl~~~~~~ 492 (1491)
|||||+||++|++++|+.||++|.+|||+|..|+|.||.+++++++++|.|||++|||||.+|++||++|++|++..+.+
T Consensus 430 NyaNEkLq~~f~~~~f~~eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~~~~Gll~lLdee~~~~~~td~~~l~kl~~~~~~ 509 (789)
T d1kk8a2 430 NYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMG 509 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
T ss_conf 99999999999899999999999861778557875788899999870874478898765157888778999999987447
Q ss_pred -CCCCCCCCC------CCCCEEEEECCCCEEEECCCHHHHCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC-------
Q ss_conf -999558999------998728980154046403123332120227999999984103578620999976766-------
Q 000453 493 -NNRFSKPKL------SRTDFTILHYAGEVTYQANHFLDKNKDYVVAEHQALLTAAKCSFVAGLFPPLPEESS------- 558 (1491)
Q Consensus 493 -~~~~~~p~~------~~~~F~I~H~ag~V~Y~~~~fl~kN~d~~~~~~~~ll~~S~~~~i~~lf~~~~~~~~------- 558 (1491)
++.|.+|.. .+..|+|+||||+|+|+++||++||+|.++++++.++++|++++|+.||........
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~l~~ll~~S~n~~i~~lf~~~~~~~~~~~~~~~ 589 (789)
T d1kk8a2 510 KNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPEEPAGGGKKKKG 589 (789)
T ss_dssp TCSSEECCCSCSSTTCCCCSEEEEETTEEEEECCSSHHHHHSCCCCHHHHHHHHTCSSHHHHHHTCC-------------
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 77553588865554468884367516885452145758760304459999999957659999985273223445677788
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf 88887650599999999999998036985897027999899887761026764024475688985420698555658899
Q 000453 559 KSSKFSSIGSRFKLQLQSLMETLNATAPHYIRCVKPNNVLKPSIFENFNVIQQLRCGGVLEAIRISCAGYPTRRTFYEFV 638 (1491)
Q Consensus 559 ~~~k~~tv~~~f~~sl~~Lm~~L~~t~~hyIrCIkPN~~k~~~~fd~~~V~~QLr~~gvle~iri~~~gyp~r~~~~~F~ 638 (1491)
++.+.+||+++|+.||+.||++|++|+||||||||||+.+.|+.||...|++||||+||+|++||+++|||+|++|.+|+
T Consensus 590 ~~~~~~Tv~~~Fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~Gvle~vrirr~Gyp~R~~f~eF~ 669 (789)
T d1kk8a2 590 KSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFK 669 (789)
T ss_dssp -----CCHHHHHHHHHHHHHHHHTTEEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC-----CCCSCEEEEHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHH
T ss_conf 77775308999999999999987547976999427755468756587999999986264999999975787405499999
Q ss_pred HHHCCCCCCCCC-CCCCHHHHHHHHHHHCCCC--CEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 831114647446-9974599999999780999--8021342100022014588677774334799999999964999998
Q 000453 639 NRFGILAPEVLE-GNYDDQVACQMILDKKGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARKIQRQTRTYIARKE 715 (1491)
Q Consensus 639 ~Ry~~L~~~~~~-~~~~~~~~~~~ll~~~~~~--~~qiG~tkVFlr~~~~~~Le~~r~~~l~~aa~~IQ~~~R~~l~Rk~ 715 (1491)
.||++|.|..+. +..+.+..|+.||..++++ .|++|+||||||++++..||.+|.+.+..+++.||++||||++|++
T Consensus 670 ~ry~~L~~~~~~~~~~~~k~~~~~il~~~~~~~~~~qiGkTkVFlr~~~~~~LE~~r~~~l~~~~~~IQ~~~R~~~~Rk~ 749 (789)
T d1kk8a2 670 QRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKA 749 (789)
T ss_dssp HHHGGGSGGGCCC---CHHHHHHHHHHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99987683400156788899999999966988120884388799776199999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8652235799998878999999999974789999995767789999823888
Q 000453 716 FILLRNAAVILQSFLRGEMARKLYEQLRREAAALKIQTNFRAYVAQRSYLTV 767 (1491)
Q Consensus 716 ~~~~r~a~i~IQa~~Rg~laRk~~~~~r~~~AAi~IQ~~~R~~~~Rk~y~~~ 767 (1491)
|+++|.+ ..|+++||++||+|++||+|+..
T Consensus 750 y~k~r~~----------------------~~ai~~iQ~~~R~~~~rr~~~~~ 779 (789)
T d1kk8a2 750 YKKLQDQ----------------------RIGLSVIQRNIRKWLVLRNWQWW 779 (789)
T ss_dssp HHHHHHH----------------------HHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHH----------------------HHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 9999999----------------------99999999999999998036999
|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} | Back information, alignment and structure |
|---|
| >d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
| >d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
| >d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
| >d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
| >d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
| >d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} | Back information, alignment and structure |
|---|
| >d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
| >d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|